LOCUS       DATAKH010000001         3959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35309,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000001 DATAKH010000000
VERSION     DATAKH010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3959
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35309"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VHN55_00005"
     CDS             <1..224
                     /locus_tag="VHN55_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEX2802357.1"
                     /translation="YRTWTQQQARGLGVSGWIRNCYDGSVEAHVEGDEAAVKALIGRM
                     HDGPPAAEVENVQVEDAASEGAGGFEVRH"
     gene            complement(221..1510)
                     /locus_tag="VHN55_00010"
     CDS             complement(221..1510)
                     /locus_tag="VHN55_00010"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEX2802358.1"
                     /translation="MANVTVIGAQWGDEGKGKIVDWLASRADLVVRFQGGHNAGHTLV
                     VEGKTYKLSLLPSGIVTGTPSMIGNGVVLDPWALKSEVERIREQGVKVTPDVLMIAET
                     CPLILPIHRDLDALREDASGTGKIGTTRRGIGPAYEDKVGRRAIRLCDLAHLDELDPM
                     LDRLCAHHDALRAGFSEPPVDRKRLRRDLAEIAEFVLPFARPAWRDLDKANRVGKRIL
                     FEWAQGVLLDVDHGTYPFVTSSNTVAGTVAAGSGTGPHAAGFVLGITKAYTTRVGSGP
                     FPTEQDNEVGEELGTRGREFGTVTGRQRRCGWFDAVLVRQAVAVGGITGIALTKLDVL
                     DTLETIRVCTGYRLDGAKLDYLPPHPADQARVEPVYAEIKGWAESTAGARSWADLPAR
                     AIKYVRRIEELIRCPVALVSTSPERDDTILVKDPFAG"
     gene            1794..2177
                     /locus_tag="VHN55_00015"
     CDS             1794..2177
                     /locus_tag="VHN55_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802359.1"
                     /translation="MPGPIAGATRHSGSFAEENGCIVFKSATSSANLTPVFPKGQTVL
                     VSDGWQTLGMYLKGSPLTVKTPYAVAGAVARGPHDGIALAKAAPASCPDTYFVVQGVH
                     KDLRAEADVWPLCMGTLLCTAIRLR"
     gene            complement(2207..3796)
                     /gene="serA"
                     /locus_tag="VHN55_00020"
     CDS             complement(2207..3796)
                     /gene="serA"
                     /locus_tag="VHN55_00020"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEX2802360.1"
                     /translation="MSGQVRVLVADKMDPRAAAIFRDRGIEADEKPGLSTDELKAIIG
                     DYDGLAVRSSTRVAAAVMDAALPRLKVIGRAGIGVDTIDVPAASARGIVVMNTPFGNS
                     ITTAEHAIAMLFALAREIPQADQSTQSGKWEKSRFMGVELAGKTLGLIGCGNIGSIVA
                     DRAHGLKMKVVAYDPFLSPERAVELGVDKAELDELLARADFITLHTPLTDQTRGILSR
                     EALAKTKPGVRIVNCARGGLIDEAALKEGLDSGHVAGAALDVFSQEPATDNPLFGTPG
                     LICTPHLGASTTEAQVNVAIQVAEQMADYLLLGGITNAVNVPSLSAEEAPRLRPYMAL
                     AEKLGRLVGQVVGARIRSIDVEVEGAAAELNIKPITGAVLAGVMSSWSDSVNMVNAPY
                     LAKERGLDVREIRNSQEGDYHTLVAVTVGTDDGPRRVEGTLFGNRAPRLVKIFDIPVE
                     AELAGQMIYIVNSDEPGFIGALGTTLGQHGVNIATFNLGRREEGGEAVALVAVDDPIT
                     PEVSDRLHHLPGVREVVPLSF"
     gene            complement(3793..>3959)
                     /locus_tag="VHN55_00025"
     CDS             complement(3793..>3959)
                     /locus_tag="VHN55_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017667593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoserine aminotransferase"
                     /protein_id="HEX2802361.1"
                     /translation="KAIVKLLEAEEAAFDIGAYRDAPPGLRIWCGATVETADIEALTP
                     WLDWAWEKTK"
BASE COUNT          631 a         1297 c         1331 g          700 t
ORIGIN      
        1 tctaccgtac atggacgcag cagcaggcac gcgggctcgg agtcagcggc tggatccgca
       61 attgctacga cggttcggtc gaagcgcatg tcgaaggtga cgaagctgcg gtgaaggcgc
      121 tcatcggacg aatgcatgac ggcccccctg cggccgaggt cgaaaatgtg caggtggaag
      181 acgcggcgag cgagggggcc ggcggcttcg aggttcggca ctagcccgcg aacgggtcct
      241 tcaccaggat cgtgtcgtcg cgttcgggcg aggtgctcac aagcgccacc gggcagcgga
      301 tcagctcttc gatacggcgg acatatttga tcgcccgtgc cggaaggtcg gcccagctgc
      361 gcgctcccgc ggtcgactcc gcccagccct tgatctctgc atagaccggc tcgacccggg
      421 cctggtcggc gggatgaggc gggaggtaat cgagcttcgc tccgtcgagc ctgtaaccag
      481 tgcagaccct gatcgtttcc agcgtgtcga gcacatcgag cttggtgagc gcgatcccag
      541 ttatcccgcc gaccgccacg gcctggcgga cgagaaccgc gtcgaaccag ccgcagcggc
      601 gctggcgccc ggtcaccgtc ccgaactccc gcccgcgggt gccgagctcc tcgcccactt
      661 cattgtcctg ctcggtcggg aacgggcccg agccgacgcg ggtggtgtag gcctttgtga
      721 ttccaagaac gaagccggcg gcgtggggcc cggtgccgct tcccgcagca acagtgcctg
      781 ccaccgtgtt ggacgaagtg acgaacggat aggtgccgtg atcgacgtcg aggagaacgc
      841 cctgcgccca ttcgaaaagg atccgcttgc cgaccctgtt ggccttgtcg aggtcgcgcc
      901 aggccgggcg cgcgaacgga agcacgaact cggcgatctc ggcgaggtcg cgccgaagcc
      961 gcttgcggtc gaccggcggt tcgctgaagc cggcccgaag ggcgtcatgg tgagcgcaca
     1021 gccggtcgag catggggtcg agttcgtcga ggtgcgcgag gtcgcacagg cggatggcgc
     1081 ggcggccgac cttgtcctca tatgcggggc cgatcccgcg gcgcgtggtc ccgatcttcc
     1141 cggtgccgct ggcatcttcg cgaagcgcgt cgaggtcgcg gtggatggga aggatcagcg
     1201 ggcaggtctc ggcgatcatc agcacgtcgg gagtgacctt gacgccctgc tcgcgaatgc
     1261 gctcgacctc ggacttgaga gcccaggggt cgaggacaac gccgttgccg atcatcgatg
     1321 gcgtgccggt gacgattccc gacggcagca gcgacagctt gtaggtcttg ccctcgacga
     1381 cgagcgtgtg gccggcgttg tggccgccct ggaagcggac gaccaagtcg gcgcggctcg
     1441 ccagccagtc gacgatcttg cccttgcctt cgtcgcccca ctgggcgccg atgacggtga
     1501 cgtttgccaa ggtgattccc cgttgtgagc ggcccgcgcg gctctacggg gtgagtggcg
     1561 gggcgtctag ttggctcggc gttagacagt gagaaagata tagtgtatca ttcccgccgg
     1621 tgggtctgga ggctattatg atgcgctctg acacgaatag gctcgtaccg cgttccctcc
     1681 gcacttctgc tttagtcggc gctgcggcca gtctggccct gacgtcctgt gccgctcagg
     1741 acaacccgtc cctcgcgatg caccgtccgc cgccctattt cgccgtgaac acgatgcctg
     1801 gcccgatcgc cggagcaacc cggcacagcg gttccttcgc cgaggaaaat ggctgcatcg
     1861 tgttcaagtc ggcgaccagt tcggcgaacc tcacgccggt attcccgaaa gggcagacgg
     1921 ttctcgtatc cgatgggtgg cagacactcg gaatgtacct caagggatca ccgctcaccg
     1981 tcaaaacccc ctacgccgtc gccggcgctg tagcccgtgg tccgcacgac gggatcgccc
     2041 tggcgaaagc ggcacccgcc tcgtgcccgg acacctattt cgttgtccag ggcgtgcata
     2101 aggatctcag ggccgaagcc gatgtctggc cactgtgcat gggcactctt ctctgcacgg
     2161 caatccggct gcgctaagtc cgcttcgcgc tgcgtacggg tagccgtcag aagctcagcg
     2221 ggaccacctc tcgcactccc gggaggtggt ggagccggtc cgagacctcg ggcgtgatcg
     2281 ggtcgtcgac cgcgaccaac gcgaccgcct cgccgccttc ctcgcggcgg ccgaggttga
     2341 aggtggcgat attgactccg tgctggccca gggtcgtgcc caatgccccg atgaagccgg
     2401 gctcgtcgct gttgacgatg tagatcatct ggcccgcgag ctcggcttcg accgggatgt
     2461 cgaagatttt caccagcctg ggcgcccggt tgccgaacaa agtcccttcg acccgccgcg
     2521 gtccgtcgtc cgtaccgacg gtgacggcga ccagcgtgtg atagtcgccc tcctggctgt
     2581 tgcggatttc gcggacgtcg agcccacgct ccttcgcgag atagggggca ttgaccatgt
     2641 tcaccgagtc cgaccagctg ctcattacgc cggctaggac ggcgccggtg atcggcttga
     2701 tgttgagctc cgcggcggcg ccttcgacct cgacatcgat cgagcggatt cgggcgccga
     2761 cgacctggcc gaccagccgc ccgagctttt cggcgagcgc catgtagggg cgaaggcgcg
     2821 gcgcctcctc ggcggacagc gagggcacgt tgaccgcatt ggtgattccg ccgagcagga
     2881 gatagtcggc catctgctcg gcaacctgga tggcgacatt gacctgggcc tcggtcgtcg
     2941 aggcgccgag atgaggcgtg cagatcaggc ccggcgttcc gaacagcgga ttgtccgtgg
     3001 cgggctcctg cgagaagaca tcgagggcag cgccggcgac atggccgctg tcgagcccct
     3061 ccttcaatgc cgcttcgtcg attagcccgc cgcgtgcgca attgacgatc cggactcccg
     3121 gtttcgtctt cgccagcgcc tcgcgcgaca ggatgccgcg cgtctggtcg gtcagaggcg
     3181 tatgaagcgt gatgaagtct gccctggcga gaagctcatc gagctccgcc ttatcgacgc
     3241 ccagctcgac cgcgcgctcc ggcgacagga agggatcata ggcgacgacc ttcatcttca
     3301 gcccgtgggc gcggtcggcg acgatcgagc cgatattgcc gcagccgatc aggccgaggg
     3361 tcttgccggc gagctcgacc cccatgaaac ggctcttctc ccacttgccg gactgggtgg
     3421 actggtcggc ctgcgggatt tcgcgggcga gcgcgaacag catggcgatc gcgtgctcgg
     3481 cggtggtgat cgagttgccg aacggcgtgt tcatgaccac gatcccgcgc gccgaggcgg
     3541 cggggacgtc gatcgtgtcg accccgatcc cggctcggcc gatcactttc aggcgaggta
     3601 gcgcggcgtc catgaccgcc gctgcgaccc gtgtcgagct gcgcaccgcg agaccgtcat
     3661 agtcgccgat aatcgccttc aactcgtcgg tcgaaaggcc gggcttctca tccgcttcga
     3721 tgccccggtc gcggaaaata gcggccgccc gagggtccat cttgtcggcg acaagaacgc
     3781 gcacttgccc gctcatttcg tcttctccca agcccagtcc agccacggcg tcagcgcctc
     3841 gatgtcggcg gtttcgaccg tcgccccgca ccagattcga agacccggcg gagcgtctcg
     3901 ataggcgccg atgtcgaagg cggcttcctc ggcctcgagc agcttgacga tcgctttct
//
LOCUS       DATAKH010000002         9593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_19622,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000002 DATAKH010000000
VERSION     DATAKH010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9593
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19622"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..292
                     /gene="rpmF"
                     /locus_tag="VHN55_00030"
     CDS             113..292
                     /gene="rpmF"
                     /locus_tag="VHN55_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEX2802362.1"
                     /translation="MAVPKRKTSPSKRNMRRSHHALKPTQFQECPNCGELKLPHNMCQ
                     ACGHYNGREIVSDEG"
     gene            322..1368
                     /gene="plsX"
                     /locus_tag="VHN55_00035"
     CDS             322..1368
                     /gene="plsX"
                     /locus_tag="VHN55_00035"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEX2802363.1"
                     /translation="MDAAPRIAIDAMGGDSGPAAMVAGVARAHRRDPELRFLIFGDDR
                     LIGPELKKHGRVESAVEIAHTTEAIAAGEKPTQAIRRARTTSMGMAINAVKDGRADAA
                     VSGGNTGALMAMSKLALRTMPGIDRPALAALLPTLGDTDVVMLDLGANTECDAQNLVQ
                     FAVMGAAYSRTGLKIEKPRVRLLNIGTEELKGTGELKEAAALLREADYLPLRFDGFTE
                     GDQLSRGNIDVVVTDGFSGNIALKTAEGTARFVTDLLRRAFKSSLRSKAGFALSRPAL
                     NLLKVHLDPNNHNGAVFLGLNGLVVKSHGSANPKGVANAIRVASRMVRNDITRKIGDD
                     LDNFRAHAFNNEAE"
     gene            1368..2327
                     /locus_tag="VHN55_00040"
     CDS             1368..2327
                     /locus_tag="VHN55_00040"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010184211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEX2802364.1"
                     /translation="MAVRSVIAGVGSALPKRRVSNEELAKTVDTSDQWIVERTGIRNR
                     HIAGDGETTATLARDAALAALDQAGLQPGDIGLIVLATATPDQTFPSSATKVQAMLGI
                     DDCVAFDVHAVCTGFLYALTVADSMLRSGASKRALVIGAETFSRILDWEDRGTCVLFG
                     DGAGALVLESREGESGILATRLHADGRHNDLLFVDGGPSTTGTVGKLRMKGREVFRHA
                     VVNLADVLSEVLAAAGLTADDVDWVVPHQANARILDATSKKLGLPPEKVVVTVDQHAN
                     TSAASVPLALDTAVRDGRIKRGDIVVLEAMGGGFTWGAAALRY"
     gene            2430..2756
                     /locus_tag="VHN55_00045"
     CDS             2430..2756
                     /locus_tag="VHN55_00045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEX2802365.1"
                     /translation="MADLGIARIGQTGLNGTLTRADLADVVHRNLGLSRAESASFVER
                     VLHHMCHSLADGENVKISGFGSFILRDKGQRVGRNPKTGVEVPIAPRRVMTFRASQIL
                     RDRIAR"
     gene            2762..3136
                     /locus_tag="VHN55_00050"
     CDS             2762..3136
                     /locus_tag="VHN55_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013041329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEX2802366.1"
                     /translation="MSAAKAPGAFKTIGELSAELGVAQHILRYWETKFPQLKPLQRAG
                     NRRYYRPDDVELARRINRLLNDEGYTIRGVQKVLRGRGGTDAAETAEDPQVRPETAPS
                     GPKLDVGRLVEIRDRLASALYD"
     gene            complement(3092..5818)
                     /locus_tag="VHN55_00055"
     CDS             complement(3092..5818)
                     /locus_tag="VHN55_00055"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007711173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HEX2802367.1"
                     /translation="MTSLRLPALHATHAGIWIADASGEVREATRGEAIARAAETPHII
                     LNAPLVGQRLGYAELSGLDLLELFAFIHPARFAVPTPAGLSRAAGIEPPSSESEAAEV
                     LQRIAASLIERLADPQWAEREGAWTVNASLHRLGWSWAPLVAKRLERPERGERMLFSR
                     LVQWEEAGDRPPPLATAVDPDDAEVKLNRLTGTRAEPREGQKAMAVAASSVFAPRRSR
                     DGPNMLLAEAGTGIGKTLAYLAPASLWAERSGGTVWVSTFTKALQRQLDSEGPKLFAD
                     RDERARRIVIRKGRENYLCLLNLEDALQGGFSGRPAILAQLVGRWAAYTKDGDMVGGD
                     LPGWLPSLFRRAGSTALTDRRGECVYGGCPHYRRCFVERAERAGREADLVIANHALVM
                     INAARSRETAPQQIVFDEGHHLFDAADSTFAVALSGQEAIEMRRWIVGPEGKSRGRRR
                     GLAARLMDVASYDDQGAAALEQAIEAALALPSDGWLARIAEGAPFGPIEALLAEVRGT
                     VYSRAKAQDAGYGIETELAEPDGALVSRAAAALEALEALNKPLAVLSRRLEAVLEDAP
                     DWLDSQARARVEGAINGLGWRRETLAAWGALLARIGGPADGDFVDWLAVERIDGREYD
                     IAINRRWLDPTRPLAEVVLKPAQGVLVTSATLRGGDGWEGAEQRTGAAHLDCGAGRFE
                     AESPFDYAASSEVLIVTDIRQGDLSALAGGYARLIEAAEGGTLGLFTAIQRLKAVHAR
                     IADRLAREGLPLLAQHVDPIDPGTLVDIFRDDPRASLLGTDALRDGVDVPGESLRLVV
                     LERVPWPRPTVLHAARRMAGGGSAYDDRVVRARLAQAFGRLIRRNSDRGVFVILSAAM
                     PSRLLRAFPAAVQVSRVPLEEAIVRVKARLAKGPGERASVVKSGGEAVADLN"
     gene            complement(5858..6202)
                     /locus_tag="VHN55_00060"
     CDS             complement(5858..6202)
                     /locus_tag="VHN55_00060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX2802368.1"
                     /translation="MSYQASCHCGAVTVDVDAEPPTEVISCNCSHCRKKGFLLAFVPR
                     DKVQVNGEEALGEYRFNKQVIAHRFCRTCGVQPFAEGPGPDGPGAMINVRCVPELDLD
                     SLKITLFDGASH"
     gene            6249..7832
                     /locus_tag="VHN55_00065"
     CDS             6249..7832
                     /locus_tag="VHN55_00065"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEX2802369.1"
                     /translation="MGNSDLRSAAMQSKAWPYEEARKLLKRYPGGKPGGGPVIFETGY
                     GPSGLPHIGTFNEVLRTTFVRRAFEELSDAPTRLIAFSDDMDGLRKVPDNIPNPELLH
                     AHLGKPLTKIPDPFGSHESFAHHNNARLRSFLDQFGFDYEFFSATECYSGGRFDEVIR
                     QVLRNWDGVMGVMLPTLREERRKTYSPVLPISPTSGIVLQVPVEVVDAEAGIIAFEDE
                     GRRVEQSALGGKAKLQWKVDWAARWVALGIDYEMAGKDLTDSVVQSGKIARILGGRPP
                     EGFNYEMFLDEKGEKISKSKGNGLSLEEWLRYGSEESLAFYIYREPKKAKSLHIGVIP
                     RAVDDYWQFRANYPKLPIEQKLGNPVHHIHSGKVPEKLLPVTYGLLLNLVSLPGLHDR
                     ETAWKFVQRYAPGTSPESDSELDQLIGLAVNYARDFVVPNLKKRPPTEDEAAALRDLD
                     SQLANLPSEADAEAIQHLVFEIGKSHYGKDQLRFWFQALYETLLGSSQGPRMGSFIAL
                     YGIDNSRRLIEQALGGADG"
     gene            7825..8079
                     /locus_tag="VHN55_00070"
     CDS             7825..8079
                     /locus_tag="VHN55_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011413884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEX2802370.1"
                     /translation="MAERAHLPGGVVHDLPGDFEDALKADADALTTWHDITPLARNEW
                     ICWIESAKKPETRRKRIDWGRENLNEGKRRPCCWPGCPHR"
     gene            complement(8097..9167)
                     /locus_tag="VHN55_00075"
     CDS             complement(8097..9167)
                     /locus_tag="VHN55_00075"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX2802371.1"
                     /translation="MRRLILAVLASCASAPLLAQAAPSPAKPAQANAPFVRAEAHAAV
                     EELAKQLEERFVFPDAAKAYAARLRSQLAAGAYSNFASAKAFAEAVTADLQAVHKDGH
                     LKMGLVPKDAPAGAPGKKGPPPGFKFISKAGWIADGVAYIRFEAFPGNEETLAELRSF
                     IDSHKQAKSLIIDLRGNHGGGLAEMDVLFPAIFDKPATLVMMDTRIAAEKGSEDDEPE
                     PTLKELPGPEGVVRRAHTVTPAAKRGSLATAKVYVLTSKQTVSAGEHFSLSLKRTRRA
                     TLIGETTRGAGHYGGVVKLGDTGYAAFIPVGRTFDPDTGEGWEGTGVKPDIAVPADKA
                     LDEALKLAGVEKSGEVALAQLK"
     gene            9246..>9593
                     /locus_tag="VHN55_00080"
     CDS             9246..>9593
                     /locus_tag="VHN55_00080"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX2802372.1"
                     /translation="MPKFGTSRAMLDRFDLALLNLVQVNDSRTAESLSEEVPLSPSAI
                     ARRLRRLRSEGWISRTIALLSRRLTDRRLRAIVAVQLSEHADQRGKTALLDRIRSAPN
                     VQLCYELAGADDLL"
BASE COUNT         1686 a         3339 c         3022 g         1546 t
ORIGIN      
        1 cgttcgctat aggagccgcg gttcgcgacg ttccggccgc cgccgcagct aaagctgctg
       61 gaaatcggcg cagatcgtcg ccaatttttt tgcaattcac acaggtgccg gaatggctgt
      121 ccccaagaga aaaacctcgc cttcgaagcg caacatgcgc cgcagccatc atgcgctgaa
      181 gccgacccag ttccaggaat gcccgaattg cggcgagctg aaactgccgc acaacatgtg
      241 ccaggcatgc ggccactaca acggccgcga aatcgtctcg gacgagggct gagcgcagcg
      301 gagcggaggg gctagcaggc gatggacgca gccccgcgca tcgcgatcga cgccatgggc
      361 ggagacagcg gcccggcggc gatggtcgcc ggagtcgcgc gcgcacacag gcgcgatccc
      421 gagcttcgct tcctgatctt cggtgacgac cggctcatcg ggccggagct gaagaagcac
      481 ggccgggtcg aatcggccgt ggagattgcc cacaccaccg aagcgatcgc agccggcgaa
      541 aagccgaccc aggcgatccg ccgcgcccgc acgacgtcga tgggaatggc gatcaacgcc
      601 gtgaaggacg gccgcgccga cgccgcggtg tcaggcggca acaccggcgc cctgatggcg
      661 atgtcgaagc ttgcgcttcg gacgatgccc ggaatcgacc gccccgcgct tgccgcgctt
      721 ctgccaacgc tcggcgacac cgacgtggtg atgctcgacc tcggcgccaa caccgaatgc
      781 gatgcgcaga acctggtcca gttcgctgtg atgggcgccg cctactcccg gaccgggctg
      841 aagatcgaaa agccccgggt ccggctactc aacatcggca ccgaggaact caagggaacc
      901 ggcgagctga aggaggccgc ggccctcctg cgcgaagccg attacctccc gcttcgcttc
      961 gacggcttca ccgaaggcga ccaattgtcg cgcggcaata tcgacgtcgt cgtcaccgac
     1021 ggcttttccg ggaacatcgc gctgaagacc gccgagggca cggctcgttt cgtcaccgac
     1081 ctgcttcgcc gcgccttcaa gagctcgctt cgctccaagg ccggcttcgc gctgtccagg
     1141 ccggcgctga acctgctcaa ggtccacctc gaccccaaca atcacaatgg cgcagtcttc
     1201 cttggcctca acgggctggt cgtgaaaagc catggaagcg ccaaccccaa aggcgtcgcc
     1261 aacgcgatcc gggtcgcttc gcgcatggtc cgcaacgaca tcacccgcaa gatcggcgac
     1321 gacctcgaca atttccgggc gcacgccttc aacaacgagg ccgagtgatg gccgtccgct
     1381 ccgtcatcgc cggtgtcgga tctgcgcttc ccaagcgccg agtctcgaat gaggagctgg
     1441 cgaaaacggt cgacacgtcc gaccagtgga tcgtcgagcg gaccggaatt cgcaaccgcc
     1501 acatcgccgg cgatggcgag acgaccgcga ctctggcccg cgatgcggcg cttgccgcgc
     1561 tcgaccaggc cgggcttcag cccggcgata tcggcctgat cgtcctcgcc accgcgactc
     1621 ccgaccagac cttcccgtcg tccgcgacta aggtccaggc gatgctcgga atcgacgatt
     1681 gcgtggcctt cgacgtccac gccgtgtgca ccggattcct ctatgcgctc accgtcgccg
     1741 attcgatgct ccgctccggc gcttcgaagc gcgcgctggt catcggcgcc gagacgttca
     1801 gccggatcct cgactgggag gaccgcggca cctgcgtcct gttcggcgac ggggccggcg
     1861 ccttggttct cgagtcgcgg gaaggcgaaa gcgggatcct tgccacccgg cttcatgccg
     1921 acgggcgcca caacgacctg ctgttcgtcg acggcggccc gtcgacgacc ggcaccgtcg
     1981 gcaagttgcg gatgaagggg cgcgaggtct tccgtcacgc cgtcgtcaac ctcgccgacg
     2041 tgctttcgga ggttttggcg gctgcgggat tgaccgcaga cgacgtggac tgggtcgtcc
     2101 cccaccaggc gaacgcccgc attctcgacg ccacgtcgaa aaaactcggc cttccgccgg
     2161 agaaggtggt ggtcaccgtc gaccagcatg ccaacacctc ggcggcgtcg gttccgcttg
     2221 ctttggacac cgccgtccgc gacggccgga tcaagcgcgg cgacatcgtc gtgcttgaag
     2281 cgatgggcgg tggctttaca tggggcgcag cagcgctcag atattgaata aatttggaaa
     2341 ttcggcgaat gtcgaattgc cgacatcaga caattccgtt acggtcgtga accggaatcg
     2401 gcgctaaacg ggggcgggag aagatagaca tggctgacct gggaatcgca cggatcgggc
     2461 agaccggctt gaacgggacg ctgactcgcg ccgaccttgc cgacgtcgtg caccgcaacc
     2521 tcggactctc gcgcgccgaa tcggccagct tcgtggagcg cgtgctccat cacatgtgcc
     2581 attcgctggc cgacggggag aatgtgaaaa tttccgggtt cggaagcttc atcctccgcg
     2641 acaaggggca gcgcgtcggg cgcaatccca agaccggtgt cgaagtgccg attgcaccgc
     2701 gccgggtgat gaccttccgg gcaagccaga tccttcgcga cagaatcgcc cgatagtcgc
     2761 ggtgtccgcc gcgaaggctc cgggcgcttt caagacgatc ggcgagcttt cggccgagct
     2821 cggggtcgcg cagcacatcc ttcgctactg ggaaaccaag tttccccagc tcaagccgct
     2881 gcagcgcgcc ggaaaccgtc gctattaccg ccccgacgac gtcgagcttg cacgccggat
     2941 caaccggctg ctcaacgacg agggctatac gattcgcggg gttcagaagg tgcttcgcgg
     3001 ccgcggcggc accgacgccg ctgaaacggc ggaggatccg caggtgcggc cggaaacggc
     3061 ccccagcggt ccgaagctgg acgtcggccg gctagttgag atccgcgacc gcctcgcctc
     3121 cgctctttac gactgacgcc cgttcgccgg ggcccttcgc aagcctcgct tttacccgca
     3181 caatcgcttc ctcgagcgga acgcggctga cctggaccgc cgccggaaag gctcggagca
     3241 ggcgcgacgg catcgcagcc gacaggatca cgaacacccc gcggtcggag ttccgccgga
     3301 tcagccgccc gaacgcctgc gccagccgcg cccgtacgac gcggtcgtca taggcgctgc
     3361 cgccgcccgc catccggcgc gccgcgtgaa gaacggtcgg ccgcggccac ggcactcgct
     3421 ccagcaccac cagcctgagc gactcgcccg gaacgtcgac cccgtcgcga agcgcgtcgg
     3481 ttccaagcag cgacgcgcgc gggtcgtcgc ggaagatatc gaccagcgtg ccggggtcga
     3541 tcggatcgac atgctgggca agcagcggca gaccctcgcg agcgagccgg tcggcgatcc
     3601 gggcgtggac cgcttttagg cgctggatcg ccgtgaacag gccaagggtt ccgccttcgg
     3661 ccgcttcgat cagccgcgca tagccgcctg cgagcgcgga taggtcgccc tgcctgatgt
     3721 cggtgacaat gaggacttcg gaggaggcgg catagtcgaa cgggctttcc gcctcgaacc
     3781 ggccggcgcc gcaatcgagg tgagccgcgc ccgtgcgctg ttcggcgcct tcccagccgt
     3841 cgccgccgcg aagcgtcgcc gaggtgacga gcaccccctg cgccggcttc agcaccacct
     3901 cggcgagcgg ccgggtgggg tcgagccagc ggcggttgat cgcgatgtca tattcgcgcc
     3961 cgtcgatccg ctcgactgct agccagtcga cgaaatcgcc gtctgcgggg ccaccgatcc
     4021 gagcaagcaa ggctccccag gcggcaagcg tctcgcgcct ccagccgagg ccgttgatcg
     4081 cgccttcgac ccgcgctcgc gcctggctgt cgagccaatc gggcgcgtcc tccagcaccg
     4141 cctccagccg ccgcgacagc accgccagcg gcttgttgag tgcctccagg gcctcgagcg
     4201 cggccgcggc gcggctgaca agcgcgccgt ccggctcggc aagctccgtc tcgatgccgt
     4261 atcccgcatc ctgcgccttc gcccgcgaat agacggtgcc ccgaacctcc gcgagcagcg
     4321 cctcgatcgg cccgaacggc gcgccttcgg cgatccgcgc cagccacccg tcggacggga
     4381 gcgccagagc cgcctcgatc gcctgctcca gcgccgccgc gccctggtca tcgtaggacg
     4441 cgacgtccat cagccgcgcc gcaagtcctc gccgacgccc gcgcgacttg ccttcgggac
     4501 cgacgatcca gcgccgcatc tcgatcgcct cctgcccgct cagggcgacc gcgaaagtcg
     4561 aatcggccgc gtcgaacaga tgatggccct cgtcgaacac gatctgttgc ggcgcggtct
     4621 cgcgcgaccg cgctgcattg atcatcacca gcgcgtgatt ggcgatcacc aggtcggcct
     4681 cgcgccccgc ccgctccgcc cgctcgacga agcagcgccg ataatgcggg cagccgccgt
     4741 atacgcactc gccgcgacgg tcggtcagtg cggtcgatcc ggcgcgtcgg aacaggcttg
     4801 gcagccagcc tggaaggtcg ccgccgacca tgtcgccgtc cttggtgtaa gccgcccacc
     4861 gcccgaccag ctgcgctagg atcgccggcc ggccggaaaa gccgccctgc aacgcatcct
     4921 cgagattgag caggcacagg taattctcgc ggcccttgcg gatgacgatc cgacgcgcgc
     4981 gctcgtcccg atcggcgaac agtttcggcc cctcggaatc gagctgccgc tgcagcgcct
     5041 tggtaaatgt cgacacccat acggtcccgc ccgagcgttc cgcccacaac gacgccggcg
     5101 cgagataggc gagagtcttg ccgataccgg tcccggcttc agcgagcagc atgttgggcc
     5161 catcgcgcga gcggcgcgga gcgaacaccg acgaagcggc caccgccatc gctttctgcc
     5221 cctcgcgcgg ctcggccctt gtgcccgtca gccgattgag tttcacctcc gcgtcatccg
     5281 gatcgacggc tgtcgctagc ggtggcgggc ggtcgccggc ttcctcccac tgcaccagcc
     5341 gcgagaacag cattcgctcg ccgcgctcgg gccgctcgag ccgtttggcg accagcggag
     5401 cccacgacca gccgagccgg tgaaggctgg cattgacggt ccacgcgcct tcgcgctccg
     5461 cccattgggg gtcggcaagc cgctcgatca ggctcgccgc gatccgctga agaacttcgg
     5521 cggcttcgga ttcgctcgac ggcggctcta tcccggcggc ccggctcaac cctgccggcg
     5581 tcggcaccgc gaaacgcgcg ggatggatga aggcgaacag ctcgagcagg tcgaggcccg
     5641 agagttcggc gtagccgagc ctttgaccga ccagcggcgc gttcaggatg atgtggggag
     5701 tctcggccgc ccgggcgatc gcctcccccc tcgttgcctc gcgcacctcg cccgatgcat
     5761 cggctatcca gattccggcg tgcgttgcat gaagtgcggg aagtcgaaga gaagtcaccg
     5821 tttcatttga agggacgcga acaaaatagc aacggaacta gtggcttgca ccgtcaaaaa
     5881 gggtgatttt aaggctgtcg agatccagtt cgggaacgca gcgcacgttg atcatcgcgc
     5941 ccggtccgtc cggcccgggc ccctcggcaa acggttgcac cccgcaggtc cggcaaaatc
     6001 gatgggcaat cacctgtttg ttgaatcggt attctcccag cgcctcttcc ccattcacct
     6061 ggaccttgtc cctcggcacg aaggcgagca ggaagccctt cttgcggcaa tgggagcagt
     6121 tgcaggaaat cacctcggtt ggcggctccg cgtcgacatc gaccgtaacc gcaccgcagt
     6181 ggcacgacgc ctgatagctc attgccgtcc ttccccgttt cccgatcccg cgctaacgcg
     6241 cctgcagcat gggtaactct gaccttcgat ccgcggcgat gcaatccaaa gcttggccct
     6301 acgaggaagc gcgcaagctc ctcaagcgct accctggcgg taagcccggc ggcgggccgg
     6361 tcattttcga aaccggctac ggcccctccg gcctccccca catcggcacc ttcaacgaag
     6421 tgctgcgcac caccttcgtc cgccgcgcct tcgaggaact gtcggacgcg cccacccgcc
     6481 tgatcgcctt cagcgacgat atggacggtc tccgcaaggt gcccgacaac atccccaatc
     6541 ccgagcttct ccacgcgcat ctcggcaagc cgctgacgaa gattcccgat ccgttcggaa
     6601 gccacgaaag cttcgcccat cacaacaacg cgcggctgcg cagcttcctc gaccagttcg
     6661 gtttcgacta tgaattcttc tcggcgaccg aatgctactc cggcggccgc ttcgacgagg
     6721 tgatccgcca ggtcctgcgc aactgggacg gggtgatggg cgtgatgctt ccaacgcttc
     6781 gcgaagagcg gcgaaagacc tattcgccgg tactgccgat ctcgccgacc agcgggatcg
     6841 tcctccaggt gccggtcgaa gtcgtcgacg ccgaagcggg gatcatcgcc ttcgaggacg
     6901 aagggcggcg ggtcgagcag tcggcactcg gcggcaaggc caagcttcag tggaaggtcg
     6961 actgggcggc gcgctgggtc gcactcggga tcgattacga aatggccggc aaggatttga
     7021 ccgacagcgt cgtccagtcc ggcaagatcg cgcgaatcct cggtggccgc cctccggagg
     7081 gcttcaacta cgagatgttc ctcgacgaaa agggcgagaa gatctccaag tcgaagggca
     7141 atgggctcag cctcgaggag tggctccgct acggaagcga agagagcctc gcattctaca
     7201 tctatcgcga gcccaagaag gcgaagagcc tgcacatcgg ggtcatcccg cgcgcggtcg
     7261 acgattactg gcagttccgg gcgaattacc cgaagcttcc gatcgagcag aagctcggca
     7321 acccggtcca ccacattcat tccggcaagg tcccggaaaa gctgcttccg gtcacttacg
     7381 ggctactcct caacctcgtc agcctgcccg ggctccacga ccgcgagacg gcgtggaagt
     7441 tcgtccaacg ctacgccccc ggcacatcgc cggagagcga ttccgagctc gaccagctga
     7501 ttggcctcgc cgtcaattac gcccgcgatt tcgtggtccc gaacctgaag aagcggccgc
     7561 cgacggaaga cgaagcggcg gcgctccgcg acctcgattc gcaattggcg aatttgccaa
     7621 gcgaggccga cgccgaagcc atccagcacc tggtcttcga gatcggcaaa agccactacg
     7681 gcaaggacca gctccgcttc tggttccagg cgctttacga gactttgctc ggctcgtcgc
     7741 aggggccgcg catgggcagc ttcatcgccc tctacggaat cgacaacagc cgccgcctga
     7801 tcgagcaggc gctgggcggg gccgatggct gagcgggcac acctccccgg cggcgtcgtt
     7861 cacgatctcc cgggcgactt cgaagacgcc ctcaaggccg acgcagacgc actaacgacc
     7921 tggcacgaca tcacgccgct cgcgcgcaac gagtggatct gctggatcga atccgcgaag
     7981 aagccggaga cgaggcgcaa gcgcatcgac tggggccgcg agaacctcaa tgagggcaag
     8041 cgacggccct gttgctggcc gggctgcccc caccgctaag ggccggcgct accgtcttac
     8101 ttcagctgcg ccagcgccac ctcaccggac ttttcaacgc ccgcgagctt tagagcctcg
     8161 tcgagcgcct tgtcggcggg aactgcaatg tccggcttca cgcccgtgcc ttcccagccc
     8221 tcgcccgtgt cgggatcgaa agtccgtccg accgggatga acgccgcata gccggtatcg
     8281 ccgagcttca cgacgccgcc ataatggcct gcgccgcgcg ttgtctcgcc gatcagcgtg
     8341 gcgcggcggg tccgcttgag cgacagcgag aaatgctcgc ccgcagagac tgtctgcttc
     8401 gaggtcagga catagacctt cgccgtggca agactgcctc gcttggctgc tggagtcacc
     8461 gtgtgggcgc gccggaccac gccttcgggc ccgggcagct ctttcagagt cggctcgggc
     8521 tcatcgtcct cgctcccctt ttcggccgca atgcgcgtgt ccatcatcac cagcgtcgcc
     8581 ggcttgtcga agatagccgg gaacagcacg tccatttcgg ccagcccgcc gccgtggttg
     8641 ccgcgaaggt cgatgatcag gctcttggcc tgcttgtgtg agtcgatgaa gctgcgcagt
     8701 tcggccaaag tctcttcgtt gccgggaaag gcttcgaagc ggatgtaggc gactccatcg
     8761 gcaatccagc ccgccttgga gatgaacttg aagccgggcg gcggcccttt ctttccagga
     8821 gcaccggccg gggcatcctt cggaaccagc cccatcttca ggtgaccgtc cttgtgaacg
     8881 gcctgaaggt cggcggtcac ggcttcggca aaagccttgg cactcgcgaa gttcgaatag
     8941 gccccggccg caagctgtga gcggagcctt gcggcatagg ccttcgccgc gtcgggaaat
     9001 acgaacctct cctccagctg cttggccagc tcttccaccg ccgcatgcgc ctcggcgcgc
     9061 acaaagggcg cgttcgcctg tgcgggcttc gctggcgacg gcgccgcctg cgccagcaac
     9121 ggggccgacg cacaggaagc cagaacggca aggatcaatc tacgcatggc cgatactcca
     9181 ctgtgttaac gtgccaacac gctagcgcga attcgcggct gctatgcgca aagttggtgc
     9241 gccgcgtgcc aaaatttggc acaagtcgag ccatgctcga ccgtttcgat ctcgcccttc
     9301 tcaacctcgt ccaggtcaat gacagccgca ccgccgagtc gttgtccgaa gaggtgccgc
     9361 tgtctccgtc ggcgatcgcc cgaaggctcc gccggcttcg ttcggaggga tggatcagcc
     9421 gcaccatcgc gctgctctcg cggcggctga ccgatcgcag gttgcgggcg atcgtcgcgg
     9481 tgcagctgag cgagcatgcc gaccagcgcg gcaagacggc gcttctcgat cgaatccgct
     9541 ccgcaccgaa tgtccagctc tgctacgaac tcgccggagc cgacgatctg ctg
//
LOCUS       DATAKH010000003         1544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_15739,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000003 DATAKH010000000
VERSION     DATAKH010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15739"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VHN55_00085"
     CDS             complement(<1..422)
                     /locus_tag="VHN55_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802373.1"
                     /translation="MTRTSQPANGALLISEMKEFAGFSKATQRYIRRSLDVAYGRRDA
                     IDCWARDEGEAASIRAQTRLYKQIDHLRMQVPDDSGLDMIEPFMGMLITLAAFDLGQD
                     RLPNFAAFRFLYERLVGAASRPWLPAAFCSAAALPHLHP"
     gene            complement(611..847)
                     /locus_tag="VHN55_00090"
     CDS             complement(611..847)
                     /locus_tag="VHN55_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802374.1"
                     /translation="MNEDRQKKSRTPPAIQSRDPESEIEERLKDNPDNCDAKVDLGSD
                     ESMDASDPPSVVQPEHNEPVPSSSFEDDDGESRP"
     gene            1001..>1544
                     /locus_tag="VHN55_00095"
     CDS             1001..>1544
                     /locus_tag="VHN55_00095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802375.1"
                     /translation="MKPIQHPLREKVFADWPLAVKSILGFWLFYALTVVVRAFLGPDP
                     GTVLENKVLTIVAGILLTFAIYAAIRLLAMQAGLRRRATVAALASIVAAGAMAGILIA
                     ADRYQDRPQDEVRFVSAEGYRVTDVGNATHIERDNAPPITVTWPRVGKLDPYLQFRIA
                     ADALVVWLFFFMAWSAYYVAT"
BASE COUNT          261 a          478 c          492 g          313 t
ORIGIN      
        1 gggtgaaggt gcggaagcgc ggcagccgag cagaaggccg ccggaagcca cgggcgcgag
       61 gcggcgccga ccaggcgctc gtagagaaag cggaaagcgg cgaaattggg cagccggtcc
      121 tggccgagat cgaacgcggc aagggtgatc agcatgccca tgaagggctc gatcatgtcg
      181 aggccgctgt cgtcggggac ctgcatgcgc aggtgatcga tctgcttata gagtcgggtc
      241 tgggcacgga tcgaggcggc ttcgccttcg tcgcgggccc agcagtcgat cgcatcacga
      301 cggccgtagg cgacgtcgag cgagcggcgg atgtagcgct gcgtggcctt cgaaaacccc
      361 gcaaattcct tcatttccga gatcagcaac gcgccgtttg ctggctggct ggtcctcgta
      421 atcatgatcc cgactccttt tgcccaagcg agatcatgcg gtttttatag ttgcgtattg
      481 cttaaccacg tgtcccaccc ccgttcagca ttgaatcaga ggggcgaccg gtgcgcaatg
      541 ttaatatctc acggaccgcc gcaacggccg taaggtgttg attatcggca acgctgtcgg
      601 aacgggtgcg ttacggcctc gactcgccgt cgtcgtcttc gaagctcgat gacggaaccg
      661 gctcgttgtg ctccggctga acgaccgacg gcgggtccga cgcatccatg gactcgtcgc
      721 tcccgagatc gaccttggcg tcgcaattgt cgggattgtc cttcagcctc tcttcgatct
      781 cggactccgg atcgcgcgac tggatcgctg gcggcgtccg actcttcttt tgcctgtctt
      841 cgttcactgc tcttgctccg gcattttaat tcgacaccag aacgacggga ctcgaacggg
      901 cgttccgggc cccggcgctt tcgaccggcg gctcggcgct ttctgcgaac acgcgccgcg
      961 ccaatggccg cgcaggcgga cagcgcgtag aagagaggcg atgaaaccga tccagcatcc
     1021 gcttcgcgag aaggtctttg ccgactggcc gctggccgtg aagtccatcc tcggcttctg
     1081 gcttttctat gcgctgacgg tcgttgtccg tgccttcctc ggcccggatc cgggaacggt
     1141 tctcgaaaac aaggtgctga cgatcgttgc gggcatcctg ctcacgttcg ccatttatgc
     1201 ggcgatccgg ctgctggcga tgcaggcagg ccttaggcgt cgggctacgg tggcggcgct
     1261 cgcttcgatc gtcgccgctg gtgcaatggc aggaatcctg atcgcggcgg accgctacca
     1321 ggaccggccg caggacgagg tccgcttcgt ttcggcggaa ggctaccgag taaccgacgt
     1381 cggcaacgca acccacatcg agcgcgataa cgcgccgccg attaccgtca cctggccacg
     1441 ggtcggcaag ctcgaccctt atctgcaatt ccggatcgcc gccgatgcgc tcgtcgtatg
     1501 gctgttcttc ttcatggcct ggagcgctta ttatgtcgcc acgc
//
LOCUS       DATAKH010000004         1655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_128,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000004 DATAKH010000000
VERSION     DATAKH010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..1052
                     /locus_tag="VHN55_00100"
     CDS             135..1052
                     /locus_tag="VHN55_00100"
                     /inference="COORDINATES: protein motif:HMM:NF039614.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase-related protein"
                     /protein_id="HEX2802376.1"
                     /translation="METQSASAVLLVRPAAFGFNAEAAESNVFSHASSETDFVRHTAV
                     EFEALARSLSDAGVETVILDDTREPAKPDAVFPNNWFSTHADGTMVVYPMATAPRRLE
                     RRVDDVRALLERQGFEVRRVVDLTSHEKQGHFLEGTGSLVLDRPNRRAFASLSLRTHA
                     DVIADFDRQLGYSTFVFDACDPGRRPIYHTNVLLSLGTRFAALCLEAVAEEHRHRLVA
                     EIEESGRTVIPMSFAQLRRFGCNLLELQGKAGPVIALSARAIASLKPDQLRALEGFGK
                     LVAVAVPTIESVGGGSVRCMIAEIHLPRN"
     gene            complement(1049..>1655)
                     /locus_tag="VHN55_00105"
     CDS             complement(1049..>1655)
                     /locus_tag="VHN55_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010218983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX2802377.1"
                     /translation="RNFISVILGGFGGEVAGPAGGAAEARPVKLGSAEDAAYIMKNAQ
                     KVIIVPGYGMAVAQAQHALRELADHLKENGVEVKYAIHPVAGRMPGHMNVLLAEANVP
                     YDEVFELEDINSEFAQTDVAFVIGANDVTNPAAKTDKSSPIYGMPVLDVEKARTVLFV
                     KRSMGGVGYAGVDNELFYRDNTMMLLSDAKKMVEEIVKSLD"
BASE COUNT          296 a          544 c          507 g          308 t
ORIGIN      
        1 atttttcgac gccgagccga ccagcgactc ggcaggccga accttcggcc aattcgcttc
       61 ggcgggcaag cggcgacgct gtggaaagat gtgggtggat tgacgtcatt tcgccggcgc
      121 gggaaagcat cgcggtggaa acgcaatccg caagcgcagt cctgctggtc cgccccgccg
      181 cgttcggctt caatgccgag gcggcggagt cgaacgtatt ctcacacgct tcgagcgaga
      241 ctgactttgt tcggcatacg gcggtcgagt tcgaggctct cgcaaggagt ctatccgacg
      301 cgggcgtgga aactgtgatc ctcgatgaca ccagagagcc ggcaaaaccc gacgcggtct
      361 tcccgaacaa ttggttctcg acccacgctg acggaacgat ggtcgtctat ccgatggcga
      421 ccgcaccgcg acggctcgaa cggcgagtgg acgacgttcg cgccctcctt gagcggcaag
      481 gcttcgaagt tcggcgggtg gtcgatctca catcgcacga gaagcagggg cacttcctcg
      541 aaggaacggg aagcctcgtg ctcgaccggc cgaaccggcg ggcgttcgcg agccttagcc
      601 tgcgcacgca cgctgacgtc atcgccgatt tcgaccggca gctcggctat tcgacctttg
      661 ttttcgacgc ctgcgatccg ggcaggcggc cgatttatca cacgaacgtc ctgctcagcc
      721 tgggcacgcg ctttgcagcc ctgtgcctcg aggccgtcgc ggaagaacac cgccaccgcc
      781 tggtcgccga gatcgaggaa agcggccgaa cggtcatacc gatgagcttc gcccagctcc
      841 ggcgcttcgg ctgcaacctg ctcgagcttc agggcaaggc cggcccggtc atcgcccttt
      901 ccgcaagggc gattgccagc ctgaagccgg atcagctgcg ggcgctcgaa gggttcggta
      961 agctcgtcgc ggtcgccgtt ccaacaatcg agtcggtcgg cggcgggagc gtccgctgca
     1021 tgatcgcgga aatccacctc ccacgaaact aatccagaga ctttacaatc tcttccacca
     1081 ttttcttcgc atctgacaga agcatcatcg tgttgtcgcg gtagaagagc tcgttgtcga
     1141 ctccggcata gccgaccccg cccatcgacc ttttcacgaa cagcaccgtg cgcgccttct
     1201 ccacgtcgag caccggcatc ccgtagatcg gcgagctctt gtcggtcttc gctgccggat
     1261 tggtgacatc attggcgccg atgacgaagg cgacgtcggt ctgggcgaac tcgctattga
     1321 tgtcctccag ctcgaacacc tcgtcgtagg gcacgttggc ctcggccagc agcacgttca
     1381 tgtggccggg catacggccc gccaccggat ggatggcgta cttcacctcg acgccgttct
     1441 ccttcagatg atcggccagt tcccgcaagg catgctgcgc ctgcgccacc gccatgccgt
     1501 agcccggcac gatgatgacc ttctgcgcgt tcttcatgat gtaggcggcg tcttccgccg
     1561 aaccgagctt gaccgggcgc gcttcggccg caccgccggc aggaccggcc acttcgccgc
     1621 cgaaaccgcc gaggatgacc gagatgaagt tgcgg
//
LOCUS       DATAKH010000005         4040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_3970,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000005 DATAKH010000000
VERSION     DATAKH010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4040
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3970"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1181
                     /locus_tag="VHN55_00110"
     CDS             <1..1181
                     /locus_tag="VHN55_00110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2802378.1"
                     /translation="VITTQVLHFDVDDHDEGVRFSRDSRIAETIGRGEYHWKSGKNDW
                     QVTFERAFNSLDQKGGLFILSPEGEFEEVDFPEGTGRVTEVRYEGIATLSRPLTPNLD
                     LQVAGGGEISHLDRTDDDQAARKFFRPKGSLNLGWHPSEGWDVSFKARRRVGQISFYD
                     FLAQPQLAQDRENAGNPELVPPQSWEFETEVAHDLGAWGKSKVTAYYHRVEDIIDIIP
                     LADHGEGIGNLPHATRYGFDSTNTFNFDPIGWKGAKLDLSFGIRKTSVKDPLTGERRP
                     ISGNRDRYLYAELRHDIPGTKLAWGATFDYSHYQLNYRLSEVFRSWEGPYWVGVFVED
                     KDVMGLTVRASAGNLLNARHRLTRTIYEDWRDSSDVAIIQRNNQLIGPIFSFSVRGNF
                     "
     gene            1258..2448
                     /locus_tag="VHN55_00115"
     CDS             1258..2448
                     /locus_tag="VHN55_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX2802379.1"
                     /translation="MAEPKILSFDWADPFDLDGQLADEEKLVRDTAEGYAQEKLQPRV
                     TEAYLEERFDREILTEMGALGLLGATIPHEYGGAGLGYVSYGLIARAVERVDSGYRSA
                     MSVQSSLVMYPIHAYGSEEQRQKYLPKLATGEMVGCFGLTEPDSGSDPGSMRTRAQKV
                     DGGYRLTGNKMWITNSPIADVFVVWAKSDAHDGKIRGFVLDKGARGLSAPKIKEKLSL
                     RASITGEIVMDNVEVGEDALLPNVEGLKGPFGCLNRARYGIGWGAMGAAEFCYHAARL
                     YTLDRKQFGKPLASTQLVQLKLANMATEITLGLQAALRVGRRLDEGVLVPETISLIKR
                     NNCGKALDIARTARDMHGGNGISAEFHVMRHSANLETVNTYEGTHDVHALIMGRAITG
                     IAAF"
     gene            2502..3074
                     /locus_tag="VHN55_00120"
     CDS             2502..3074
                     /locus_tag="VHN55_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX2802380.1"
                     /translation="MSMFGWIILGLTALLLLYAVGIYNRLVRLRALVKEAFSGITVQL
                     RRRADLIPNLVEAVKGYATHERQVFEEVTRARAETVKAGSVEATAQADAHMTGLLGRL
                     FAVAEAYPELKANTNFLQLQDQLASIETELQSARRYYNATVRDLNSTIQSFPPVLIAR
                     PLGFSEEPSYEDSDASIQTAPKVSFPSPTA"
     gene            3077..>4040
                     /locus_tag="VHN55_00125"
     CDS             3077..>4040
                     /locus_tag="VHN55_00125"
                     /inference="COORDINATES: protein motif:HMM:NF021489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HEX2802381.1"
                     /translation="MRAFCALLATLVLGASPAVAQERITSFVSDVAVQQDSSLEVTET
                     IDIVSEGNQIRRGIYRDFPTRYRGRNGSRIRVGFEFESAERDGNPEKAAVEPLSNGVR
                     IRIGDADTLIEPGPHRYVIRYRTTRQVGRFDSFDELYWNATGNGWGFPIEAAEARIRL
                     PSPARFLQNAAYTGAEGSTDSNAEVVREEPGEIVFRTTWPLEPYEGLTVAAAWPKGVV
                     AEPDEGTRLGWLLSDYGPPIVGGLGLLGILGFYVLAWKRAGRDPKPGTIVPLFSPPHD
                     LSPAGMRYIAEMEADNRSFAAALVDMGVRGHIRIVEEDGGWLSSD"
BASE COUNT          783 a         1332 c         1246 g          679 t
ORIGIN      
        1 ccgtcatcac gacacaggtc ctgcatttcg acgtggacga tcacgacgag ggagtgcgtt
       61 tctcgcgcga ttcgcggatc gctgaaacga tcggccgcgg cgagtatcac tggaaaagcg
      121 gcaagaacga ctggcaggtc accttcgaac gcgcgttcaa ctcgctcgac cagaagggcg
      181 gcctgttcat cctctcgccg gaaggtgaat tcgaggaggt cgatttcccc gaggggactg
      241 gccgtgtcac cgaggtccgg tacgagggga ttgcgactct cagccggccg ctcacgccga
      301 acctcgatct ccaggtcgcc ggcggtggag agatttcaca tctggaccgg accgacgatg
      361 atcaagccgc gcggaagttc ttccggccca agggcagcct caatctcggc tggcacccgt
      421 ccgaggggtg ggacgtaagc ttcaaggcgc gccgccgggt cggccagata agcttctacg
      481 acttccttgc gcagccgcag ttggcgcagg accgggaaaa tgccggcaat ccggagctcg
      541 tgccgccgca gagctgggag tttgagaccg aagtcgcgca cgacctcggc gcgtggggca
      601 agagcaaggt cacggcttac tatcaccggg tcgaggacat catcgacatc atcccgctgg
      661 ccgaccacgg cgaaggcatc ggcaacctgc cccacgcaac ccgctacggt ttcgacagca
      721 ccaacacgtt caacttcgat ccgatcggct ggaagggcgc gaagctcgac ctcagcttcg
      781 gaatccgaaa gaccagcgtg aaagacccgc tgaccggcga acggcgtcca atcagcggca
      841 accgcgaccg ctatctctac gcggagcttc gccacgacat cccggggacc aagctcgcct
      901 ggggagccac tttcgactac agccattacc agttgaatta ccgtttgagc gaagtcttcc
      961 gcagctggga aggcccatat tgggtcggtg tcttcgttga agacaaagac gttatgggac
     1021 tgacagtccg tgccagcgcc ggcaatctcc tcaatgcgcg ccatcgcctc acccgcacta
     1081 tctacgagga ttggcgcgac agcagcgacg tcgcgatcat tcagaggaac aaccagctga
     1141 tcgggccgat cttcagcttc agcgttcgcg gcaacttcta acaagtcccc aggctggcgc
     1201 ggtctcccgg cgcccgctag agcagccccc gattccaacc aatcgggggc tgtttacgtg
     1261 gctgagccga aaatcctttc gttcgactgg gccgatccgt tcgacctcga tggccagctg
     1321 gccgacgaag agaagctcgt ccgcgacacg gccgagggct atgcccagga gaagctccag
     1381 ccgcgggtta ccgaggccta tctcgaggag cggttcgacc gcgaaatact gaccgagatg
     1441 ggtgcgctcg gcctgctcgg agcgaccatt ccgcacgaat atggcggcgc cggcctgggc
     1501 tatgtcagct acggcctgat cgcccgcgcc gtcgagcggg tcgacagcgg ctaccgctcg
     1561 gcgatgtccg tccagtcgag cctcgtcatg tacccgatac acgcctacgg atcggaagag
     1621 cagcgccaga aatacctgcc gaagcttgcc accggcgaga tggtcggctg cttcggcctc
     1681 acagagcccg attcaggttc cgaccccggg agcatgcgga cccgcgcaca gaaggtcgac
     1741 ggcggctatc gcctcaccgg caacaagatg tggatcacca attcgccgat cgccgacgtc
     1801 ttcgtggtgt gggcgaaatc ggacgcgcac gacggcaaga tccgcggttt cgtcctcgac
     1861 aagggtgcca ggggcctgtc ggcgccgaag atcaaggaga agctgtcgct tcgcgcctcg
     1921 atcaccggcg agatcgtgat ggacaatgtc gaggtcggcg aagacgccct actccccaac
     1981 gtcgagggtc tcaaaggccc gttcggttgt ctcaaccggg cccgctacgg gatcggctgg
     2041 ggagcgatgg gcgcggccga attctgctat cacgccgccc gtctctacac gctcgaccgc
     2101 aagcagttcg gaaagccgct cgcatcgacg cagctcgtgc agctgaagct ggccaacatg
     2161 gcgaccgaga tcaccctcgg cctgcaagcg gcgctgcggg tcggccgccg cctcgacgag
     2221 ggcgttctcg tcccggagac gatcagcctc atcaagcgca acaattgcgg caaggcgctc
     2281 gacatcgcgc ggaccgcccg cgacatgcat ggcggcaacg gaatatcggc tgaattccac
     2341 gtgatgcgcc actccgcgaa cctcgagacg gtcaacacct acgaaggcac gcacgacgtc
     2401 cacgcgctga tcatgggccg cgcgatcact ggcatagccg cattctagcc gaccgccgca
     2461 aaattgctta agctcgcttc cgggcaaacg ggggcaatcg catgagcatg ttcggctgga
     2521 tcatccttgg gcttactgcc ctgctgcttc tttacgcagt gggcatctac aaccggctgg
     2581 tccgcctgcg ggccctggta aaggaagcgt tcagcggcat caccgtccag cttcgccgcc
     2641 gcgcggacct gatcccgaac ctcgtcgaag cggtgaaggg ctatgcaacc catgagcgcc
     2701 aagtgttcga ggaagtcact cgggcgcgcg ccgaaaccgt gaaggcggga agcgtcgaag
     2761 cgacggcaca ggccgacgcc cacatgaccg gattgctcgg ccgcctgttc gccgtcgcag
     2821 aggcctatcc ggagctcaag gccaacacca atttcctcca gctgcaggac cagctggcaa
     2881 gcatcgagac cgagcttcag agcgcccgcc gctattacaa tgccaccgtc cgcgacctca
     2941 attcgaccat ccagagcttc cctccggtgc tgatcgcgcg accgttgggc ttttccgaag
     3001 agccttctta cgaggactcg gacgccagca tccagaccgc gcccaaggtg tccttcccca
     3061 gcccgaccgc gtgacgatgc gcgccttttg cgcccttctc gccacacttg tcctcggggc
     3121 cagcccggca gtggcgcaag agcggatcac cagcttcgtc agcgatgtgg ccgtgcagca
     3181 ggattcgtcg ctcgaggtca ccgaaaccat cgacatcgtt tccgaaggca accaaatccg
     3241 gcgcgggatt tatcgcgatt ttccgacccg ataccggggc cgaaacggca gccggatccg
     3301 ggtgggcttc gagttcgaaa gcgccgagcg cgatggaaat cccgaaaagg cagccgtcga
     3361 gcctctttcc aatggagtca ggattcgaat cggcgatgcc gacacgctga tcgagccggg
     3421 cccgcaccgc tatgtgatcc gctaccgcac cacgcggcag gtcggacgct tcgactcgtt
     3481 cgacgagctg tactggaatg cgaccggcaa cggctggggc ttcccgatcg aggccgccga
     3541 ggcgcgaatc cgcctacctt cacccgcgag gttcctccag aatgctgcct atacgggcgc
     3601 cgaagggtcg accgacagca atgccgaggt tgtccgtgaa gagccgggcg agatcgtctt
     3661 ccgaacgacc tggccgctcg aaccctacga aggcctcacc gtcgccgcgg cctggcccaa
     3721 gggcgttgtc gccgagccgg acgagggtac caggctcggt tggttgctgt ccgattacgg
     3781 gcccccgatc gtcggcgggc ttgggctgct cggcattctc ggcttttacg tgcttgcctg
     3841 gaagcgcgcc ggccgcgacc cgaagccagg cacaattgtg cccctcttct cgcctcccca
     3901 cgacctcagc cccgccggca tgcgctatat agccgagatg gaggcggaca accgctcgtt
     3961 tgctgcggca ttggtcgaca tgggtgtccg cggccatatc cgaattgtcg aggaggacgg
     4021 cggctggctg tcgagcgaca
//
LOCUS       DATAKH010000006         1512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_23729,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000006 DATAKH010000000
VERSION     DATAKH010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23729"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1183
                     /gene="odhB"
                     /locus_tag="VHN55_00130"
     CDS             <1..1183
                     /gene="odhB"
                     /locus_tag="VHN55_00130"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007164582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEX2802382.1"
                     /translation="EVPSPVAGVLTEKVASEGDTVEVGAVIARIDEKAEAGAPAEKGA
                     GSTGTNPPGAGENPELRDEEKAPEPEPEEDGGETSASDHITTLSPAVRRAVLEHHVDP
                     TSIKGTGKDGRITKDDVLAAAKAKESGSPAEAGAQAPQAKAPAPEKKASPPGPRPSPG
                     DRKEERVKMSRLRQTIAKRLKDAQNTAALLTTFNDVDMSAVMEARERYKELFAKKHGI
                     KLGFMSFFVKAVALAARDVPSVNASIEGDEIVYRDYLDVSIAVSAPKGLVVPVVRNAQ
                     AMSFAEIETTIADYGKKAKEGTLTVEEMQGGTFTISNGGVFGSLLSTPIINPPQSAVL
                     GMHRIEERPVAVNGEIVIRPMMYLALSYDHRLVDGREAVTFLVRVKEAIEDPTRLLID
                     L"
     gene            1192..>1512
                     /locus_tag="VHN55_00135"
     CDS             1192..>1512
                     /locus_tag="VHN55_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006954650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2802383.1"
                     /translation="MADNYDFDVLVIGSGPGGYVAAIRAAQLGLKTACAESRETLGGT
                     CLNVGCIPSKALLHASELFEEAAHGTLAKWGVKTSGVEVDLAAMHESKDTAVKGLTGG
                     IEFLF"
BASE COUNT          301 a          485 c          502 g          224 t
ORIGIN      
        1 cgaggtcccc tcgccggtcg ccggcgtgct gacggagaag gtggctagcg agggcgacac
       61 cgtcgaggtc ggggcggtca ttgcgcgaat cgacgagaag gccgaggccg gagcgcctgc
      121 ggagaaaggc gcgggatcta ctggcactaa cccgccggga gccggcgaga accccgagct
      181 tcgcgacgag gagaaagcgc ccgagcccga gccggaagaa gacgggggcg agaccagcgc
      241 gtccgaccat atcactacgc tttcccccgc cgttcgtcgc gctgtactcg agcaccacgt
      301 cgatcccacc agcataaagg gcactggcaa ggacgggcgg attaccaagg acgacgtcct
      361 tgcggcggcc aaggcgaagg aaagcggttc cccggcggag gccggggccc aggcgccgca
      421 ggcgaaagcg ccggcgcccg agaaaaaggc ttcgcctcct gggccccggc cttcgccggg
      481 ggacagaaaa gaagagcgcg tgaagatgtc gcggcttcgc cagacgatcg ccaagcgcct
      541 caaggacgcg cagaacacgg cggcgcttct caccacgttc aacgacgtcg acatgtcggc
      601 ggtgatggag gcgcgcgagc gctacaagga gctgttcgcg aagaagcacg gaatcaagct
      661 cggcttcatg agcttcttcg tcaaagcggt ggctcttgcg gctcgcgacg ttccctcggt
      721 caacgcctcc atcgaaggcg acgagattgt ctatcgcgac tatctcgacg tctcgatcgc
      781 ggtctcggcg ccaaaggggc tggtcgtccc cgtcgtccgc aacgcccagg cgatgagctt
      841 tgccgagatc gagacgacga tcgccgacta cggcaagaag gcgaaggaag gcacgctcac
      901 cgtcgaggaa atgcagggcg gcaccttcac catctccaac ggcggcgtgt tcggctcgct
      961 tctgtccact ccgatcatca accccccgca atcggcggtg ctcggcatgc accgcatcga
     1021 ggagcgcccc gtcgcagtga acggcgaaat cgtcatccgc ccgatgatgt acctggcttt
     1081 gtcctacgac caccgcctgg tcgacggccg cgaggcggtc actttcctcg tccgcgtcaa
     1141 ggaagcgatc gaggacccga cgcggctgct tattgacctt taaggaagca aatggctgac
     1201 aattacgact tcgacgtgct ggtgatcggc tccggcccag gcggctatgt cgccgcgatc
     1261 cgcgccgcac agctggggct gaagaccgcc tgcgcggaaa gccgcgaaac gctcggcggc
     1321 acctgcctca acgtcggctg cattccgtcc aaggccctct tgcacgcgtc agagctgttc
     1381 gaggaagcgg cccatggaac gctggccaaa tggggcgtga agacaagcgg cgttgaagtc
     1441 gatctcgccg cgatgcacga gtccaaggac acggcggtga aggggctgac cggcggaatc
     1501 gagttcctgt tc
//
LOCUS       DATAKH010000007         6745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_27482,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000007 DATAKH010000000
VERSION     DATAKH010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6745
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27482"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2562
                     /gene="pepN"
                     /locus_tag="VHN55_00140"
     CDS             <1..2562
                     /gene="pepN"
                     /locus_tag="VHN55_00140"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013038706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEX2802384.1"
                     /translation="PKHVEIRREDYRPPDWLVPAIELKFDLDPKATRVRATLSVERNG
                     DHDRPLRLDGDDLEPLSVKLDGSDCEWRMDGARLVVELPNDRATVETEVEIHPAANTK
                     LMGLYASGGMLCTQCEAEGFRRITFFPDRPDVLSKYRVRMEADRAKFPILLTNGNPVA
                     EGDSGDGRHWAEWEDPFPKPSYLFALVAGDLKANRDSFTTMSGRKVDLAVWVREADLP
                     KTAHAMESLKQAMQWDEEVYGREYDLDLFNIVAVSDFNMGAMENKGLNIFNSAYVLAD
                     PDTATDRDFDNIARVVAHEYFHNWSGDRVTCRDWFQLSLKEGFTVFRDQSFSADIGSR
                     AVKRIDDVRELRAIQFPEDSGPLAHPVRPDSYIEISNFYTATVYNKGAELIRMMKTLL
                     GEENFRAGTDLYFERHDGEAATCDDFVKALEDASGVDLTHFKLWYSQAGTPKVSARLE
                     QDGERAILHLSQSIPPTPGQPVKKPMAIPLKAALIGESSGAEIAPERLVLLDTSEKTV
                     EFEGIGEAALLSINRDFSAPIVIDVERKEGELEKLAASDTDPFARYEAMQELMLRWLT
                     ATARGEAVDPAPVIRAIGDTLRSNRLDPAFKAEAILVPNESMIGDRMEMVDPDAIHSA
                     RDRLRTVIGTELEGKLANAQRGGGASGYDLGAEAKGARRLRAVALGLLAAGDAAKGAR
                     LAKAQVDSADNMTDRQGALMVLASLDAPEREQALKDFYERYEDDPLVIDKWFSVQAAA
                     QRPDTVEQVEALARHPKFNPANPNRLRSVGSVFGMNQWAFHDASGGGYRFLADLILTA
                     DKLNPQVAARLVTPFGRWRRFDEKRKRLMRAELERMLATQGLSKDLYEQVSKSLA"
     gene            complement(2564..3154)
                     /locus_tag="VHN55_00145"
     CDS             complement(2564..3154)
                     /locus_tag="VHN55_00145"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HEX2802385.1"
                     /translation="MRGVTAVALAASLAGCSLGSLLGGGGKPPAYLYTLTSEAPPAAA
                     ARSAAVGQTVTVRTPVIPKELRTTRVPVQVNPTVIQYVTDLQWVDTPDKLFQSLVEET
                     VRRTTNRVVLDPNQSALDPGLVVTGELNRFGYDAQTHMVVVQYDASLATQGGTHVETR
                     RFEASLPADGTAGTVGPVLNQAANQVAMQVAQWIGG"
     gene            complement(3163..4116)
                     /locus_tag="VHN55_00150"
     CDS             complement(3163..4116)
                     /locus_tag="VHN55_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010215504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX2802386.1"
                     /translation="METRSNYILVGAVTLAMLAGLLIFTVWLAGLSNKETKCYDIYFT
                     QGVGGLNKGSNVNFSGVPVGQITKISLLPDRPEFIWVRIEVANDTPVLQGTTAEIHGV
                     GFTGVSEIQLAGATRGARPLEQQGPQGCPVIPSSTSGLGALLNSAPELMERIQRLTER
                     LTELLSDKNQNAISDILENVDRTTKVLADRAPELADAISDTRVAVRNAGIAAERVGAL
                     ADNTNRLVVEQGQPAAEDLRKAIASVQAAAENLDAMVGDARPGVQNFSKSTLPELNRL
                     VRDLRELTQSLNGVAQRVEQGGIGGALGPEKLPDYKPGKTK"
     gene            complement(4116..4916)
                     /locus_tag="VHN55_00155"
     CDS             complement(4116..4916)
                     /locus_tag="VHN55_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010162558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2802387.1"
                     /translation="MTAPKDCDPIITVRGLSNAFGEQVIHEDLELTVCRGEILGVVGG
                     SGTGKSVLMRSIIGLQKPAAGEVEVLGENMIDRDEDEAKNIRRRWGILFQNGALFSTL
                     TVAENVEVPIREYFPYIKQQLLDEIASYKIAMSGLPAEAGPKFPSELSGGMVKRAGLA
                     RALALDPELLFLDEPTAGLDPIAAAAFDELIRSLQKKLDLTVFLITHDLDTLYAICDR
                     VAVLADKKVIAVATIPELLALDHPWIQEYFNGPRGRAAADTAEEHAEA"
     gene            complement(4913..5962)
                     /locus_tag="VHN55_00160"
     CDS             complement(4913..5962)
                     /locus_tag="VHN55_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2802388.1"
                     /translation="MTGAITISRAASTAREIDAEPDPLTIDLSEVSRMDTVGAWIVYR
                     TTRDRNAKVVGASPEAKSLLEQVAEADKPAKVHPEEAGGFLRVLRELGEWVADVGVTL
                     VGLLGFFGATLVGFANLIKRPKRFRLNAVVQRFDVVGVRALGIIGLMSFLIGIVIAQQ
                     GAVQLQQFGAEVYTINLIGRITVRELGTLMTAIMVAGRSGSAFAAQLGTMKITEEIDA
                     MRTIGVSPIEALVIPRLISAVVMMPLLAFWAMFTSLIGGGIFVWLVLGIPPLTYIQRL
                     QEVIPLTDLWIGLIKAPVFGFIIALAGCFQGMLVESNSEEVGQRTTTAVVQSIFLVIV
                     LDAVFAVFFSSIGWK"
     gene            6110..>6745
                     /locus_tag="VHN55_00165"
     CDS             6110..>6745
                     /locus_tag="VHN55_00165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX2802389.1"
                     /translation="MVEHNRPVFIPVGTNPVRIFGLKADERACRLAANAGFEVERSVP
                     PGRASVLANLDYAWDPAWLKLVRDRPGSILQLDGVPVLAHLPVGHSRESVEQAIAGEG
                     GSLHGLEPIDAATAEVTYDELRKRERPFVLPLRPDTADEVERAAYDASYKGVTDALTL
                     YLWRKPAFYLTRWAAEAGVTPNAITGVGAVLCLLAFFYFWFGNYWLGILAGF"
BASE COUNT         1213 a         2161 c         2195 g         1176 t
ORIGIN      
        1 ccgaagcatg tcgaaatccg gcgcgaggac tatcgtccgc cggactggct ggtccccgcg
       61 atcgagctga agttcgacct tgaccccaaa gcgacgcggg tacgcgccac gctatcggtc
      121 gaacgcaatg gggatcacga ccggccgctc cggctcgacg gcgacgatct cgaaccgctg
      181 agcgtcaaat tggatggctc ggactgcgag tggcggatgg acggcgccag gctggtcgtc
      241 gagctgccca acgaccgcgc caccgtcgag acggaagtgg aaatccaccc ggccgccaac
      301 accaagctga tgggcctcta cgcgtcgggc gggatgctgt gcacgcagtg cgaggcggag
      361 ggcttccgcc ggatcacctt cttccccgac cgacccgacg tgctgagcaa atatcgggtg
      421 cggatggagg cggaccgcgc caagttcccg atcctgctga ccaacggcaa cccggttgcg
      481 gagggcgatt ccggtgacgg gcgccactgg gccgagtggg aggacccgtt ccctaagccc
      541 tcctatttgt tcgcgctggt cgccggcgac ctaaaggcga accgtgacag cttcaccacc
      601 atgtccgggc gcaaggtcga cctagccgtc tgggtgcggg aggcggattt gccgaagacc
      661 gcccatgcga tggagagcct caagcaggca atgcaatggg acgaggaggt ctacgggcgc
      721 gaatacgacc tcgacctgtt caacatcgtt gccgtgtccg acttcaacat gggcgcgatg
      781 gagaacaagg gcctcaacat cttcaactcg gcctacgttc tcgccgatcc cgacaccgcc
      841 acggaccgcg acttcgacaa tatcgcgcgg gtcgtcgcgc acgaatattt ccacaattgg
      901 tcgggcgaca gggtcacctg ccgcgactgg ttccagctca gtttgaagga aggcttcacc
      961 gtcttccgtg accagagctt ttccgccgac atcggaagtc gggcggtcaa gcgcatcgac
     1021 gacgtgcgcg agcttcgggc aatccagttc cccgaggatt caggcccgct tgcccacccg
     1081 gtgcggcccg acagctatat cgagatttcg aacttctaca cggcgaccgt ctacaacaag
     1141 ggcgccgagc tgatccggat gatgaaaact ctgctgggcg aggagaattt ccgcgccggg
     1201 accgatctct atttcgagcg ccacgacggg gaggcggcga cctgcgacga tttcgtcaag
     1261 gcgctggagg acgcgagcgg cgtcgacctc acgcacttta agctgtggta ttcgcaggcc
     1321 ggcacgccca aggtttcggc ccggctggag caggatggcg aacgcgccat tctccacctc
     1381 agccaaagca ttccgccgac ccctggacag cccgttaaga agccgatggc gattccgctg
     1441 aaggcggcgc tgatcgggga gagtagcgga gccgagatcg ctccggagcg gctggtcctg
     1501 ctcgacacat cggaaaagac tgtggagttc gagggaattg gagaggctgc gctgctttcg
     1561 attaatcggg acttctcggc gccgatcgtc atcgatgtcg agcgcaagga gggcgagctg
     1621 gagaagcttg ccgccagcga cacggatccg ttcgcgcgct acgaggcgat gcaggagctg
     1681 atgctgcgct ggctgacggc gaccgcgaga ggcgaagcgg tcgacccggc gccggtgatt
     1741 cgcgccatcg gcgacacgct tcgttcaaac cggctcgacc cggcgttcaa ggccgaggcg
     1801 atcctggtgc ccaacgagag catgatcggc gacagaatgg aaatggtcga cccggacgcc
     1861 atccattccg cccgagaccg gctcaggacc gtcatcggaa ccgagcttga gggaaaactt
     1921 gcgaatgcac agcgcggagg gggcgcgtca ggctatgacc tcggcgccga agccaagggc
     1981 gcccggcggc tgcgcgccgt cgcgctcgga ttgcttgccg ccggcgacgc cgcaaagggc
     2041 gcgaggctcg ccaaggcgca ggtcgattcg gccgacaaca tgaccgaccg ccagggcgcg
     2101 ctgatggtgc ttgcgtcgct cgacgcgccg gagcgcgagc aggcgctgaa ggacttctac
     2161 gagcgttacg aggacgatcc gttggtcatc gacaaatggt tttccgtcca ggcggcggcg
     2221 cagcggcccg ataccgtcga gcaggtcgaa gcgctcgccc gccatcccaa gttcaacccg
     2281 gccaacccca accggctgcg gtcggtcggc tctgtgttcg ggatgaacca atgggcgttc
     2341 cacgacgcat ccggcggcgg ttaccgcttc ctcgccgacc tcatcctgac ggccgacaag
     2401 cttaacccgc aggtggcggc acggctggtg accccgttcg gccgctggcg gcggttcgac
     2461 gagaagcgca aaaggctgat gcgcgctgag cttgagcgga tgcttgcaac gcaaggactg
     2521 tcgaaagacc tctacgagca ggtcagcaag agcctggcgt aggctagccg ccgatccact
     2581 gggcgacctg catcgccacc tggttggccg cctggttgag caccgggccg accgtgccgg
     2641 cggttccgtc ggcggggagc gaggcttcga agcggcgggt ctcgacgtgg gtgccgccct
     2701 gcgtggcgag cgacgcatcg tactggacaa cgaccatgtg cgtctgcgcg tcatagccga
     2761 agcggttgag ctcgcccgtc acgacaaggc cggggtcgag cgccgactgg ttcgggtcga
     2821 gcacgacccg gttggtcgtc ctccgcacgg tttcctcgac cagcgactgg aacagcttgt
     2881 ccggcgtgtc gacccattgc aggtccgtca catattggat gacggtcggg ttaacctgga
     2941 ccggtacgcg agtcgtcctc agctccttgg ggatgacggg cgttcgcacc gtcaccgtct
     3001 ggccgacggc tgcggatcga gccgccgccg cgggaggcgc ttccgaggtc aacgtgtaga
     3061 ggtacgcggg tggcttgccg ccgccgccga gcaggctgcc gagcgaacag ccggcgaggg
     3121 aggctgccaa tgccactgcg gtgacgccac gcacgaacgc tctcattttg tcttccccgg
     3181 tttatagtcg ggcagcttct ccggcccgag agcgccgccg atcccgccct gctcgacgcg
     3241 ctgcgcgacg ccgttcagtg actgggtcag ctcgcgaagg tcgcgcacga gccggttgag
     3301 ctcgggcagt gtcgacttgc tgaaattctg gactccgggc cgggcgtcac cgaccatcgc
     3361 gtcgaggttt tccgctgccg cctggactga agcgatcgcc ttgcgcaaat cctcggcggc
     3421 gggctggccc tgttcgacca cgagccggtt ggtgttgtcg gcaagcgcac cgacgcgctc
     3481 ggcggcgatg ccggcgttgc gaaccgctac gcgggtgtcg ctgatagcat ccgccagctc
     3541 gggagcgcgg tcggcgagga ccttggtggt gcggtcgaca ttctccagga tgtccgaaat
     3601 tgcattctgg ttcttgtcgg aaagcagctc cgtcagccgc tctgtcaggc gctggatccg
     3661 ctccatcagc tccggcgcgc tgttgagaag cgcgccgagc ccgctggtgc tcgacgggat
     3721 gacggggcag ccctgcggcc cctgctgctc gagcggccgg gctccgcggg tggccccggc
     3781 aagctggatt tcgctgactc cggtaaagcc gactccgtga atctcggcgg tcgtgccctg
     3841 caggaccggc gtatcgttgg cgacttcgat cctgacccaa atgaactcgg gacggtcagg
     3901 gagaagcgag atcttggtga tctggccgac cgggactccc gagaaattga cgttcgagcc
     3961 cttgttcagg cctccgacgc cctgcgtgaa gtaaatgtcg tagcatttgg tctccttgtt
     4021 cgagagacct gccagccaga cggtgaagat caacaggccg gcgagcatcg caagcgtcac
     4081 tgcgccgacc aggatatagt tcgaacgggt ttccatcagg cttccgcgtg ctcctcggcc
     4141 gtgtccgccg ctgctcgtcc acgcggcccg ttgaaatact cctggatcca gggatgatcc
     4201 aaagccaata gttccggaat cgttgcgact gctatcactt tcttgtctgc aagcaccgcg
     4261 acacggtcgc agatggcgta gagcgtgtcg agatcatgcg tgatcaggaa cacggtcagg
     4321 tccaatttct tttgcagcga gcggatcagc tcgtcgaagg cggcggcggc gatcgggtcg
     4381 aggccagcgg tcggctcgtc gaggaacaat aattcgggat cgagcgcgag agcgcgggca
     4441 aggccggcgc gcttgaccat cccgcccgac agctccgacg ggaatttcgg gcctgcttcg
     4501 gccggcaacc cgctcatcgc gatcttgtag gacgcgatct cgtcgagaag ctgctgcttg
     4561 atgtacggga aatattcgcg gatcggcact tcgacattct ctgccaccgt caaggtcgag
     4621 aacagggcgc cgttctggaa caggattccc cagcgccggc ggatgttctt ggcttcatcc
     4681 tcgtcgcggt cgatcatgtt ttcgccgaga acctcgactt cgcccgccgc aggtttctgg
     4741 aggccgatga tagaccgcat gagcaccgac ttgccggttc ccgatccgcc gacgacgccg
     4801 agaatttcgc cccggcacac cgtaagctcg agatcctcgt ggatgacctg ctcgccaaag
     4861 gcattgctca ggccccgaac ggtgatgatc ggatcgcagt ccttcggcgc ggtcatttcc
     4921 agcctatcga gctgaagaag acggcgaaaa cggcatcgag cacgatcacc aggaagatcg
     4981 actggacgac ggcggtggtg gtgcgttggc cgacctcttc ggaattgctt tcgacgagca
     5041 ttccctggaa gcagccggcg agggcgatga tgaagccgaa caccggcgcc ttgatgagac
     5101 cgatccacag gtccgtaaga ggaatcactt cctggagccg ctggatgtag gtcaacggcg
     5161 gaattccgag cacgagccag acgaatatcc caccgccgat gagggacgtg aacatcgccc
     5221 agaaggcgag cagcggcatc atcaccacgg ccgagatcaa tcgcgggatt accagagcct
     5281 cgatcggcga aactccgatc gtccgcatcg cgtcgatctc ctcggtaatc ttcatcgtcc
     5341 cgagctgggc agcgaaggcc gatccggagc ggccggcgac catgatcgcg gtcatcagcg
     5401 taccgagctc gcggacggtg atccggccaa tcaggttgat cgtatagact tccgcgccga
     5461 actgctgcag ctggaccgcc ccctgctggg cgatcacgat cccgatcaaa aagctcatca
     5521 gcccgatgat cccgagcgcc cgcacaccaa ccacgtcgaa ccgctggacg acggcattga
     5581 gccgaaatct tttggggcgc ttgatcaggt tggcaaagcc gaccagtgtc gccccgaaga
     5641 agccgagcag gccgaccaaa gtcaccccga cgtccgcaac ccactcgccg agttcgcgaa
     5701 ggacacgaag aaagccgccg gcttcttcgg ggtggacctt ggcgggcttg tcggcttcgg
     5761 caacctgctc aagaaggctt ttcgcttccg ggctggcgcc gacgaccttc gcgttgcggt
     5821 cgcgggtggt gcgatagaca atccaggcgc cgaccgtgtc catccggctg acctcgctga
     5881 ggtcgatggt caaagggtcc ggctccgcgt cgatttcacg cgcagtgctt gcggctcgcg
     5941 agatggtgat cgcccccgtc atgcggtagg tcgccccgtc cccctcggcc ccctgtggcg
     6001 gatcgctctc catgtgcggc ggaagagtgc gcgaaatcgt cgcgtccagc aagcgcggtg
     6061 agcaggaccc actttcatgc cgccgttcgc gaccctaaga accggccaaa tggttgaaca
     6121 caatcgcccc gttttcattc ccgtcggcac gaatccggtc aggatattcg gcctgaaggc
     6181 ggacgagcgc gcctgccgcc tcgcagccaa tgccggcttc gaagtcgagc gatcggtgcc
     6241 gcctggacgt gcatcggtgc tcgccaacct cgactatgcc tgggacccgg cctggctgaa
     6301 gctggtccgc gaccgcccgg gcagcatcct tcagctcgac ggcgttccgg tcctcgcaca
     6361 cttgccggtc ggccattccc gcgaatcggt cgagcaggcc attgccggcg agggcggctc
     6421 gctgcacggc ctcgagccga tcgacgccgc gaccgccgaa gttacgtacg acgagcttag
     6481 gaagcgcgaa cggccgttcg tcctcccgct tcgccccgac accgcggacg aggtcgaacg
     6541 cgccgcctat gacgcgtctt acaaaggcgt caccgacgcg ctgaccctct atttgtggcg
     6601 caagccggcc ttttacctca cccgctgggc ggcggaggcg ggcgtgactc cgaacgcgat
     6661 taccggcgtc ggcgcggtgc tgtgcctgct cgccttcttc tatttctggt tcggcaatta
     6721 ctggctgggc attctggccg gtttc
//
LOCUS       DATAKH010000008         8037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35385,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000008 DATAKH010000000
VERSION     DATAKH010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8037
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35385"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..774
                     /locus_tag="VHN55_00170"
     CDS             <1..774
                     /locus_tag="VHN55_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003041764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEX2802390.1"
                     /translation="RSRAGLLGDDIVLGSNNNNFVKPGPGEPVLISLDDAETLFHEFG
                     HAIHYFLSDVHYPGLGGSQRDFVEYPSQVNENWLLTPAVLQRFAKHHETGQPMPQALV
                     DKIQKAQTFNQGFATVEYLSAAIVDMMLHQDSSGIVDPDAFEKTALAKIGMPDEIVLR
                     HRLPHFNHLFSSDSYSAGYYSYLWSETMDADTWAAFEETGDVWNRTIADRFARYLLST
                     GNETDRAEAYRQFRGRDPDVNALLRKRGFPVPGETGGSD"
     gene            complement(802..1788)
                     /locus_tag="VHN55_00175"
     CDS             complement(802..1788)
                     /locus_tag="VHN55_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEX2802391.1"
                     /translation="MADSLPGFRGPIRVSQFKGGQSNPTYRIDADSGSYVLRRKPPGK
                     LLPGAHAVDREYRVLAALGGQEFPVARVHGLCEDQSVIGTAFYVMDMVEGRIFWEAQL
                     PGLSRADRAAAFDSMNATIARLHSYDPTEIGLGDYGRPSGFVERQVARWSKQYVGDVE
                     AGRITAMDRLVAWLEKHLPPDSGRTSIVHGDFRCDNMIFDARAPTVRAVLDWELSTLG
                     DPASDFTYHLLMYRMPADLFAGLAGMDLDALGIPSEENYVAAYCRRTGRDELPNKDYL
                     VVFNLFRLAAIIHGIRGRIARGTASSAHAIETAGKVEPLAELAWAQAKTARL"
     gene            1920..2765
                     /locus_tag="VHN55_00180"
     CDS             1920..2765
                     /locus_tag="VHN55_00180"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX2802392.1"
                     /translation="MARLIHLSDLHFGAHDPQLVEAVGQKVNAIAPDLVVVSGDFTQR
                     ARTEQFQEACRFLEQLRDAGHEVLAVPGNHDIPLYDVLRRFLSPLTRYMRFIDDTLCP
                     LQEIPGATVLGINTARSLTFKDGRINEEQMQFIRETFDRAAPDATRILVTHHPLFALK
                     VGETVTRAVGRSDLALDAIGDAGVDLLLAGHNHDASVHSARDLVTRAGPALVVQAGTA
                     TSTRVREQEQSFNVIEVDGRSVRVTVESWNGSEFAAQDTQRYERQEDHWRIAGADKRL
                     DEPAQ"
     gene            2782..3621
                     /gene="nadC"
                     /locus_tag="VHN55_00185"
     CDS             2782..3621
                     /gene="nadC"
                     /locus_tag="VHN55_00185"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEX2802393.1"
                     /translation="MIAGFDSDEFVSRILAEDLGEGGDVTSTATISADARFTAELAAR
                     EAIVVAGLELAEAFFRRLDRQVSVERLASDGDHVEAGAILMRLSGNARAMLAAERSAL
                     NTLQHLSGIATLARRYVEAIAGTGAALLDTRKTIPGLRALEKYAARMGGAQNHRMRLD
                     DGVLIKDNHVAVAGSVATAVRAAKDADTGLQVQVEVDSIGQIEEALAAGADRLLLDNM
                     DPATLRRAVELVADRVPLEASGGVTLESIRAIAETGVDFISVGRITQSAPAVDIGMDY
                     ALD"
     gene            3715..5121
                     /locus_tag="VHN55_00190"
     CDS             3715..5121
                     /locus_tag="VHN55_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX2802394.1"
                     /translation="MFKGLKPITYAGREVWPLVEGGKGVSATNHASSGAWAAAGGIGT
                     VSAVNADSYDPEGRIIPQIYQGLTRRERHEELIQFAVDGAVAQVQRAYDIAGGKGAIN
                     INVLWEMGGAQRVLHGVLERTKGLVAGVTCGAGMPYKLSEIAASYGVNYLPIISSARA
                     FSALWKRAYHKAAEWLAAVVYEDPWLAGGHNGLSNAEDPRQPQDPYPRVKALRDTMRE
                     HGIADSVPIVMAGGVWRLDEWENWIDNPELGQIVFQFGTRPLLTQESPIPPEWKAKLM
                     ELEEGDILLHRFSPTGFYSSAVRNSFLRNLEARSDRQIAFTKETLGDHHFELDVGLNG
                     KKNYWVTKGDLQHAREWYAAGFTEAMKTPDETLIFVDPEEKKHIRKDQAECMGCLSQC
                     AFSSWADNEKNTTGRLADPRSFCIQKTLQDIAHGGPVDQNLMFAGHGAYRFKTDPFYS
                     NGFVPTVKQLVDRILTGA"
     gene            5121..5600
                     /locus_tag="VHN55_00195"
     CDS             5121..5600
                     /locus_tag="VHN55_00195"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX2802395.1"
                     /translation="MRLRGLVTALVIAAWATPSAAQDKQPPYWASIASGQAMTRNGPA
                     RTYPGKWLYQRRDLPVRVIQKYENWRLIQDPDGEKGWMLVTLLSDRRTAMVKPGDPRP
                     IYSDPNTHSRIRYRAEAGVVGRIGRCGGGWCRIAIGKRDGYIRTSDIWGVGPDETID"
     gene            5625..6059
                     /locus_tag="VHN55_00200"
     CDS             5625..6059
                     /locus_tag="VHN55_00200"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX2802396.1"
                     /translation="MSVTAAAAFLLAAATQPPVEYLPAPAMNGQAAPFSSAVRVGDVL
                     YLSGILGFGADGKLPEGIEAQTKQTMDNIGVVLKRAGVGFDDVFHCTAFLADMKDWPA
                     FNGVYVTYFKPDRRPARSAFGANGLAAGALLELECQAYAGKG"
     gene            complement(6061..7254)
                     /locus_tag="VHN55_00205"
     CDS             complement(6061..7254)
                     /locus_tag="VHN55_00205"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003044507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX2802397.1"
                     /translation="MTDTTTDPIVILSYARTPMGSFQGALSGASATELGATAVKAAVE
                     RAGVKPDQVDKVFMGNVLPAGLGQAPARQAALGAGLPRSAEAVTVNKVCGSGMQAAIF
                     ATDMLKAGSADVIVAGGMESMSNAPYLSKKYRAGARIGHDTVYDHMMLDGLEDAYDKG
                     RAMGTFAEDAAREYQFTREQQDNYAIESLRRANDAISSGKFDKEVTPVTVTTRKGEVT
                     VDKDEQPGKGNPEKIPQLKAAFAKDGTITAATSSSISDGAAALVLTRESVADKLGTKP
                     IARVVAHAAHAQEPAKFTSAPVPAIQKVLDKAGWSVDEVDLFEVNEAFACVAMIAMRD
                     IGIPHEKINVHGGATALGHPIGASGARILTTLVAALQQTGGKRGVASLCIGGGEATAM
                     AVELV"
     gene            7352..>8037
                     /locus_tag="VHN55_00210"
     CDS             7352..>8037
                     /locus_tag="VHN55_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2802398.1"
                     /translation="MTDPALDFGLGEMADTIRETTERFAREKIAPIAAEIDEKDEFPA
                     QLWPQMGDLGLHGITVEEEYGGLGLGYLEHVVAQEEVARASASVGLSYGAHSNLCVNQ
                     IRRWGNDEQKKKYLPKLISGEHVGALAMSEASAGSDVVGMKLKAEKSGNGYRLNGTKF
                     WITNGHQANTLVVYAKTGEGSRGITAFIIEKDMDGFAPGQKIDKMGMRGSPTAELVFD
                     DCEVPEENIMG"
BASE COUNT         1490 a         2607 c         2566 g         1374 t
ORIGIN      
        1 cggagccgcg cgggcctgct cggcgatgac atcgtgctcg ggtcgaacaa caacaatttc
       61 gtcaagccgg ggccgggcga gccggtgctg atcagcctcg atgacgccga gaccctgttc
      121 catgagttcg gccacgccat ccattacttc ctctcggacg tccattatcc gggcctcggc
      181 ggatcgcagc gcgacttcgt cgaatatcca agccaggtga acgagaattg gctgctgacc
      241 ccggcggtgc tgcagcgctt cgccaagcac cacgagaccg gccagccgat gccgcaggcg
      301 ctggtcgaca agatccagaa ggcgcagacg ttcaaccagg gcttcgccac cgtcgaatat
      361 ctgtcggcgg cgatcgtcga catgatgctc caccaggact cgtccggaat tgtcgacccg
      421 gacgcgttcg aaaaaacggc gctcgccaag atcggaatgc cggacgagat cgtgcttcgc
      481 caccggctgc cgcacttcaa tcacctgttc tcgtcggatt cctattccgc cggctattat
      541 tcctacctgt ggtcggagac gatggacgcc gacacctggg cagcgttcga ggaaacgggc
      601 gacgtctgga accgcacgat tgcggaccgc ttcgcgcgct acctgctgtc gaccggcaac
      661 gagaccgatc gagcggaagc gtatcgacag ttccgcggcc gcgacccgga cgtcaacgcg
      721 ctgctcagga agcgcggctt cccggtgcca ggcgaaaccg gcggcagcga ctaacagcca
      781 ttacgaattg ccaggcgcac ttcagaggcg cgccgttttc gcctgggccc aggcaagctc
      841 ggcgagcggc tcgaccttgc cggctgtttc gatcgcatgc gccgaagacg ctgttccgcg
      901 agcgatccgg ccccggatcc cgtggatgat cgccgccagc cggaacaggt taaagacgac
      961 gagataatcc ttgttcggga gctcgtcgcg cccagtccgg cgacaataag cggccacata
     1021 attctcttcg gaggggatac cgagcgcgtc gaggtccatg cccgcaagtc cggcgaagag
     1081 atcagcaggc atccggtaca tcagcaggtg ataggtgaag tccgacgccg gatcgccgag
     1141 cgtcgacaac tcccagtcga gcactgctcg aacggtcggc gcccgcgcgt cgaagatcat
     1201 gttgtcgcag cggaaatcgc catgcacgat gctggtgcgg ccgctgtcgg gcggaagatg
     1261 cttttccagc cacgccacga gccggtccat cgccgtgatc cgcccagcct cgacgtcgcc
     1321 gacatattgt ttcgaccagc gtgcgacctg ccgttcgacg aacccgcttg gccggccata
     1381 gtcgccgagc ccgatttccg tcgggtcgta gctgtgcaga cgggcgatcg tcgcattcat
     1441 tgaatcgaac gcggcggcac ggtcggcgcg gctcagtcca gggagctgcg cctcccagaa
     1501 gatccgccct tcgaccatgt ccatcacgta aaaggcggtg ccgatgacgc tctggtcttc
     1561 gcataggcca tgaacccgcg cgaccggaaa ttcttggccc ccgagcgccg ccagcacccg
     1621 atattcccgg tcgactgcat gcgcaccggg aagcagcttt cccggtggct tgcggcgaag
     1681 gacataggat ccgctgtccg cgtcgatgcg gtaggtcggg ttggactggc cgcctttgaa
     1741 ctggctgacc cggatcggtc cgcgaaagcc tgggaggcta tcggccatcc acgcttcgag
     1801 cgccgcttcg tcgaatcgca accgatcgct aactgcgcgg gttccggtgt tcgcttcggt
     1861 gcggtccact tacccacatg tatcgatgaa ccggcgcgtg tcacgcgcgt tggcgaagca
     1921 tggctcgcct gatccacctg tccgacctcc atttcggcgc ccacgacccg cagttggtcg
     1981 aggccgtcgg tcaaaaagtg aacgcgatcg cgcccgacct cgtggtcgtc agcggcgact
     2041 tcacccagcg cgcccgtacc gaacagttcc aggaggcgtg ccgctttctc gaacagcttc
     2101 gcgacgccgg ccacgaggtg ctcgccgtgc ccggcaatca cgacatcccg ctgtacgacg
     2161 tgcttcggcg gttcctctcg ccgctgactc gttacatgcg cttcatcgac gacacgctct
     2221 gcccgctcca ggaaattccc ggggcgactg ttctcgggat caacacggct cggtcgctca
     2281 ctttcaagga cggccggatc aacgaagagc agatgcagtt catccgcgaa acgttcgatc
     2341 gggcggcgcc cgacgccacc cgaatcctgg tcacccacca cccgctgttc gcgctgaagg
     2401 tcggtgaaac cgtgacacgc gcagtcggcc ggagcgacct ggcgctcgat gcgatcggcg
     2461 acgccggcgt cgacttgctc ctcgccggcc acaatcacga cgcatccgtg catagcgccc
     2521 gcgacctcgt cacccgcgcc ggccccgcgc tcgtagttca agccggcacg gcgacctcga
     2581 cccgggtccg cgagcaggag cagagcttca acgtcatcga ggtcgatggc cggagcgtcc
     2641 gggtaaccgt cgaatcgtgg aacggctccg aattcgccgc ccaggatact cagcgatacg
     2701 agcggcagga ggatcactgg cggatagccg gagcggacaa gaggctcgac gagccggcgc
     2761 agtagccata gacgcgcagc catgatcgcc ggcttcgaca gcgacgaatt cgtcagccgt
     2821 atcctcgccg aggatttggg agagggcggc gacgtcactt cgactgcgac gatctccgcc
     2881 gatgcccgct tcaccgccga gcttgccgcg cgcgaggcga tcgttgttgc gggcctggaa
     2941 cttgccgaag cctttttccg gcggcttgac cggcaagtca gcgtcgaacg cctcgcaagc
     3001 gacggcgacc atgtcgaggc aggcgcgatt ctgatgcggc tttcgggcaa tgccagggca
     3061 atgcttgccg ccgaacgttc agcactcaac acactccagc acctgtcggg catcgcgacc
     3121 cttgcgcggc gttacgtcga ggccatcgcc ggcaccgggg cagccctgct ggacacccgc
     3181 aagacaattc ccgggcttcg ggcgctggag aaatatgctg cgcggatggg cggggcgcag
     3241 aaccaccgga tgcgcctgga tgacggtgtt ctgatcaagg acaaccacgt ggccgtcgcc
     3301 ggctcggttg ccactgccgt ccgggccgcg aaggatgccg acactggcct gcaggtccag
     3361 gtggaggtgg attcgatcgg ccagatcgaa gaagcgctcg ccgccggagc cgaccggctc
     3421 ctgctcgaca acatggaccc ggccacgctc cgacgggcag tcgagctggt cgccgaccgc
     3481 gttccgcttg aggcgtcggg cggggtcacc ctcgaatcga tccgcgcgat tgcggaaacc
     3541 ggcgtcgatt tcatctccgt cggccgaatt acgcaatccg ctcccgccgt cgacatcggc
     3601 atggattatg cactcgatta ggaacttgcg cggcaaccgc tatttattcg catcgaggcg
     3661 aatcgcgccc tatatgagcg ccttgcgagc gcatccgcgc cggggagatc gaatttgttc
     3721 aaggggctga agcccatcac gtacgccggc cgcgaggttt ggccgctggt cgaaggcggc
     3781 aagggcgtta gtgcgaccaa tcatgccagc tcgggcgcct gggcggctgc gggcggaatc
     3841 ggaaccgtgt cggcggtcaa cgccgacagc tacgatcccg aagggcggat aatcccgcaa
     3901 atctaccaag gcctgacccg gcgcgagcgg cacgaggagc taatccagtt tgcagtcgac
     3961 ggtgccgtcg cccaggtcca gcgcgcctat gacatcgccg ggggcaaggg cgcgatcaat
     4021 atcaacgtgc tgtgggaaat gggcggcgcg cagcgagtac tccacggggt cctcgagcgc
     4081 acgaaggggc tcgtcgccgg cgtcacctgc ggcgccggca tgccgtacaa gctgagcgag
     4141 attgccgctt cctacggcgt caactacctc ccgatcatca gctcggcacg ggcgttcagc
     4201 gcattgtgga aacgcgccta tcacaaggcg gccgaatggc tcgcagcggt cgtttatgaa
     4261 gacccgtggc tcgccggggg gcacaacggc ctcagcaacg ccgaggaccc gcgccagccg
     4321 caggatccct acccacgggt gaaggcgctt cgcgacacga tgcgcgagca cggcatcgcc
     4381 gacagcgttc cgatcgtcat ggcaggcgga gtctggcgcc tcgacgagtg ggaaaattgg
     4441 atcgacaatc ccgagctcgg tcagatcgtg ttccagttcg gcacccgtcc gctgctcacc
     4501 caggaaagcc cgatcccgcc cgagtggaag gcgaagctga tggagctgga ggaaggcgac
     4561 atcctcctcc accgtttctc tccgaccggc ttctactcct cggcggtccg caacagcttc
     4621 cttcgcaacc tcgaagcccg atcggaccgg cagatcgcct tcaccaagga aacgctcggc
     4681 gaccatcatt tcgagctcga cgtcggcctt aacggcaaga agaactattg ggtcaccaag
     4741 ggcgacctgc agcacgcccg cgaatggtat gcggccggct ttaccgaggc gatgaaaacc
     4801 cccgacgaga cgttgatctt cgttgacccg gaagaaaaga aacacattcg caaggaccag
     4861 gccgagtgca tgggctgcct ttcgcaatgc gcgttttcgt cttgggcgga caatgagaag
     4921 aacacgaccg gacggctggc cgacccgcgc agcttctgca tccagaaaac ccttcaggac
     4981 atcgcccacg gagggccggt ggaccagaat ttgatgttcg cgggccacgg tgcctatcga
     5041 ttcaagaccg atcctttcta ttccaacggc ttcgtcccga cggtgaagca gctggtcgat
     5101 cggattttga cgggcgcctg atgcggcttc gggggctggt aaccgcactt gtgattgccg
     5161 cttgggcgac gccctcggcg gcgcaggaca agcagccgcc ctattgggcg tcgatcgcga
     5221 gcgggcaggc gatgacccga aatgggccgg cgcggaccta tccgggcaaa tggctttacc
     5281 agcgccgcga cctgccggtg cgggtgatcc agaaatacga aaactggcgc ctcatccagg
     5341 atcccgacgg cgagaagggc tggatgctgg tgaccctgct cagcgaccgg cgaaccgcga
     5401 tggtcaagcc gggcgatccg cggccgatct acagcgaccc gaacacccac agccggatac
     5461 gctatcgcgc cgaagccgga gtcgtcgggc ggatcggcag atgcggcggc gggtggtgcc
     5521 ggatcgccat cggcaaacgc gacggttata tccgcacaag cgatatctgg ggcgtcggcc
     5581 cggacgagac gatcgactga tcaaggttta aagggggcat caaaatgagc gtaaccgcag
     5641 cagccgcatt cttgcttgca gccgccactc agccgcccgt cgaatatctc cccgccccgg
     5701 caatgaacgg ccaggccgcg ccattctcga gcgcggttcg ggtgggcgat gttctttatc
     5761 tgtccggcat tctgggcttc ggggccgatg ggaagctgcc tgaaggcatc gaagcgcaga
     5821 ccaagcagac gatggacaat atcggcgtcg ttcttaagcg cgctggcgtc ggcttcgacg
     5881 acgttttcca ctgcaccgct ttccttgccg acatgaagga ctggccggcg ttcaacggcg
     5941 tctacgtcac ttatttcaag cccgaccgac gacccgcaag aagcgcattc ggagccaacg
     6001 gcctcgccgc cggcgccttg ctcgagcttg aatgccaggc ctacgcgggg aaggggtagc
     6061 ctaaaccaac tccaccgcca tcgcggttgc ttcgcccccg ccgatgcaca ggctcgccac
     6121 cccgcgcttc ccgccggttt gctggagcgc cgcgaccaaa gtcgtcagga tgcgcgcacc
     6181 gctggcgccg atcggatgtc cgagcgcggt cgctccgcca tggacgttga ttttctcgtg
     6241 cgggattccg atgtcgcgca tggcgatcat tgcgacgcag gcaaaggcct cgttgacctc
     6301 gaacaggtcg acctcgtcga cgctccagcc cgccttgtcg agcaccttct ggatcgcggg
     6361 caccggggcg gaggtgaatt tcgccggctc ctgagcatgg gcggcgtggg cgacgacgcg
     6421 cgcgatcggc ttggtgccaa gcttgtcggc gacgctctcg cgggtcagga ccagtgccgc
     6481 ggcgccgtcg ctgatcgatg acgaggtcgc ggcagtgatc gtgccgtctt tggcgaaagc
     6541 agccttgagc tgcgggatct tctcgggatt gcccttgccg ggctgctcgt ccttgtcgac
     6601 ggtgacttcg cccttacggg tggtgacggt gacgggagtc acctccttgt cgaacttgcc
     6661 gctgctgatc gcgtcgttgg cgcggcgaag gctctcgatc gcataattgt cctgctgctc
     6721 acgcgtgaac tgatattcgc gcgccgcatc ttcggcgaag gtgcccatcg cgcggccctt
     6781 gtcataggcg tcctcgaggc cgtccagcat catatggtcg tagaccgtgt catggccgat
     6841 ccgcgcacct gcgcgatact tcttcgacaa atagggtgcg ttggacatgc tctccatgcc
     6901 gccggcgacg ataacgtcgg cggacccggc cttgagcatg tcggtggcga agatcgcggc
     6961 ctgcatgccc gatccgcaca ccttgttgac cgtgaccgct tcagccgagc gaggaaggcc
     7021 tgcgccgagc gctgcctggc gggccggagc ctggccgaga ccggccggaa gcacattgcc
     7081 catgaacacc ttgtcgacct ggtccggctt cacgccggcg cgctcgaccg ccgccttaac
     7141 cgcagtggcg ccaagctcgg tcgccgaagc gcccgatagt gcgccctgga agctgcccat
     7201 cggcgtgcgc gcgtaggata ggatgacaat cgggtcagtg gtggtgtcgg tcatttgtga
     7261 agctccgtct tgttgcagcg cacataagac cgctcgctcg cttgttcaaa tcgcggaggc
     7321 ggtgctacgc gcgcttcgac aggagacccg aatgaccgat cccgcactcg atttcggcct
     7381 cggcgaaatg gccgacacga tccgcgagac gaccgagcgc ttcgctcggg agaagattgc
     7441 gccgatcgcg gccgaaatcg acgagaagga cgaattcccg gcccagctct ggccgcagat
     7501 gggcgatctc gggcttcacg ggatcacggt cgaggaggaa tatggagggc tcggtctcgg
     7561 ctatctcgag catgttgtcg cgcaggagga ggtggcgcgg gcttcggcat cggtgggcct
     7621 gagctacggc gctcattcca acctgtgcgt caaccagatc cgccgttggg gcaatgacga
     7681 gcagaagaag aaatatctgc cgaagctgat cagcggcgaa catgtcggcg cgctggcgat
     7741 gagcgaggcc agcgccggct cggacgtcgt gggcatgaag ctcaaggcgg agaagagcgg
     7801 caacggatac cgcctcaacg gcaccaagtt ctggatcacc aacggtcacc aggcgaacac
     7861 gctcgtcgtc tacgccaaga ccggcgaggg aagccgcggg attaccgcct tcatcatcga
     7921 aaaagacatg gacggcttcg cgccgggtca aaagatcgac aagatgggca tgcgcggctc
     7981 gcccaccgcc gaactcgtat tcgacgactg cgaagtgccc gaggaaaaca tcatggg
//
LOCUS       DATAKH010000009         8236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_23881,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000009 DATAKH010000000
VERSION     DATAKH010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8236
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23881"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="VHN55_00215"
     CDS             <1..691
                     /locus_tag="VHN55_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019051968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HEX2802399.1"
                     /translation="LIMIVIRLAPIAVACFMFNLAALFGWDLLIRLSAYVGVVLLALA
                     IQMFVVFPILLATLGKKNPLAFFRETQEASVMAFSTASSNATLPTSLKVADENLNLPR
                     RIARFVLTIGATANQNGTAMFEGVTVIFLAQFFGVELTLWQQVMVMLVCILGGIGTAG
                     VPAGSLPVVALILAMVGIKPEAIAIVLGVDRFLDMCRTTLNVVGDLVAAQVISAAEPD
                     ETQVEAPPQPA"
     gene            691..1503
                     /locus_tag="VHN55_00220"
     CDS             691..1503
                     /locus_tag="VHN55_00220"
                     /inference="COORDINATES: protein motif:HMM:TIGR01459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01459 family HAD-type hydrolase"
                     /protein_id="HEX2802400.1"
                     /translation="MAPSPTLDEIGDRYRVILCDIWGCIHDGVNLYPGAAARLARWRG
                     EGRTTILITNAPRTAEAVARQLVRLGLDPELWDGIATSGDAGIEALNKAARPVGFIGT
                     QSDRAILEGSGVRITDTGDFDELACSGLDGRRRQVAEYEEQIRPLAERDVLMHCLNPD
                     RVVILDGQPVPCAGAIADRYIELGGRVEWYGKPYPAIYRHALRLAGDAPPDQILAIGD
                     GLETDTLGAARMGMDCVYVTGGIAQGQSMPAGFAAKHGLDDWRPLAVVEGLR"
     gene            complement(1477..2808)
                     /locus_tag="VHN55_00225"
     CDS             complement(1477..2808)
                     /locus_tag="VHN55_00225"
                     /inference="COORDINATES: protein motif:HMM:NF014051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEX2802401.1"
                     /translation="MRHWFKDQHMRSLLKNSSYLGASRIVAAIAAVVTLAITGRALGV
                     MMFGLLILIHSYAQAASSLSKFQSWQIVVRYGGEGLVAGRPEDFKVATGFSFGLDILS
                     GIVGMLLAMAVLPLIGGWFGIPDRYILLSILYCTVIPTMQAMTPSGVLRTLDRFDLVS
                     WGGITYPIARMVLAAIAWASDAPFEIYIAIWWVTDLGGDLYMWWLTHRELKRRDMADA
                     LRPTLRPHPLKGAWKFAIRVNVTSSLTAAWGPIARLIVGGLLGPASAAFYRVAATLAD
                     SAQRPTDLLARAFYPEVMRLDPRTKRPWKLTLRGAAIAAMFGVLAVLLVAFAGEPLIQ
                     LMFGSQFAPAYPVLAVLIIAPLLAMISFPLEPMLYRLDRSDAPLTARIVATTVYFVIV
                     APLSWRFGVQGAAAAFVIGTVVFVAILSLQLWREYRRLHPASRSAKALDDC"
     gene            complement(2850..4886)
                     /locus_tag="VHN55_00230"
     CDS             complement(2850..4886)
                     /locus_tag="VHN55_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007011888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX2802402.1"
                     /translation="MPHANGVNSNGTRAIALVGPAGAGKTSVAEAILFAAGATDRHGS
                     VGNGTSIGDSSPEARSRGGSTELNLYNFDFLDDHFALIDTPGSVGFTADGARAIALAD
                     LAIVVVDPDPARAPLAAPALRALDEQGIPHILFVNRIDQAHGRIRDLLSALQPVSVSP
                     LIARQIPIRDGEKITGFVDLALERAFHYNGKDSEQIDIPGEIQDREQEARNQMLEQLA
                     DHDDELLEQLVMEQPPEQDRVLKDLARETGESLAVPVLFGSAESGWGLGRLLKALRHE
                     TPGPESTAGRLEVSDPSLHVFKIHSGGTVGRLALARALGGRISEGSDLRTRNGETARL
                     GALFRVQGERTQKVSEAKNGDIVAVAKIDHVKAGEWLSSGTVPPPIDVELPSLNCAFA
                     IEPADRKDDVKLSGALHRLLEEDPALVLEQDEETHEMRLRGVNDEHLKTVLARLSRRY
                     GVEVKSHAPTIGYRESIRKTVTQKGRHKKQSGGHGQFGDVIIEVKPLPRGSGFQFGDR
                     ITGGAIPKQWIPAVEDGVREAMRKGPLGFPVVDVAVTLIDGSYHSVDSSELAFRLAGR
                     LAMAEALAAAGPHLLEPMQKVGVVCPSSAASRVSSAVASRRGQMLGMAPRDGWTGWDR
                     IDAIIPEAELSGLEAELRSQSQGLASYEAEFDHLAELNGPLADKVVRQSVPEPA"
     gene            5037..6092
                     /locus_tag="VHN55_00235"
     CDS             5037..6092
                     /locus_tag="VHN55_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010542685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX2802403.1"
                     /translation="MAKRKGRAADRHGHRVTSPWRMPSQAWKDIASRTWKRAWQDNVG
                     LVAAGVTYYGFLALVPLLGMIVLAYGVLADPETVVRNVRAITMILPPDAAQLIADQLI
                     AAVKMTRETRGFGILVALLVALYGGTNGAGAIIGALNIAYVEKEKRSLGRFYLIAAAI
                     TLGGVVLALLALVAATSLTFLTNLVPGVSGVVVGVGKIGGYAALTLAAAAVAATLYRF
                     APSREHAQWQWITPGSLFAAIIWLLLTLVFSFYVTSVTDYGATYGSLGTIIVLLTWIY
                     LSAYALIVGAELNSEIEHQTAKDSTTGKPRPMGKRGAWAADNVAKDDEPDVRKVPSMA
                     EAMPDAPTQKKFKTEKR"
     gene            complement(6099..7010)
                     /gene="rpoH"
                     /locus_tag="VHN55_00240"
     CDS             complement(6099..7010)
                     /gene="rpoH"
                     /locus_tag="VHN55_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEX2802404.1"
                     /translation="MAAKSGGAMSIPASGGEAGLNRYLAEIKKFPILAPEEEYMLAKR
                     WREHGDTEAAAKLVNSHLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRG
                     FRLATYAMWWIRASIQEFILRSWSLVKMGTTAAQKKLFFNLRRMKNQIDAFEEGDLKP
                     QDVTKIATDLGVTEDEVVSMNRRMSMGGDTSLNVSLKGDEGGESQWQDFLVDSGPLQD
                     ELVAEAEESQVRHDLLVDAMDSLNEREKHILTERRLTDDPKTLEELSQVYGVSRERIR
                     QIEVRAFEKLQSSLIKLAGEKKLLPAA"
     gene            complement(7070..8017)
                     /locus_tag="VHN55_00245"
     CDS             complement(7070..8017)
                     /locus_tag="VHN55_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010217434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX2802405.1"
                     /translation="MGGTQTIEVQLEPAQSGWRLDRALAAAVPTLSRERLKALIRSGG
                     LTSGETPLRDPATKVRGDERFLLQVPEPEPAHNEPQEIPLEVVFEDPHLLVIDKPAGL
                     VVHPAAGNRDGTLVNALLHHCGESLSGIGGVARPGIVHRIDKDTSGLLVVAKSDVAHE
                     GLAKQFAAHSIDRKYLAIVSGLPKSSGGTVDAPLARSASNRKKIAIVEDGRGRRAVTH
                     WKRLEILDDAALVECSLETGRTHQVRVHMASLGHPLLGDPVYGRSRPHRELLKELDFH
                     RQALHAARLGFTHPVTKHRLSFSSGMPADMQELFTRLRV"
BASE COUNT         1385 a         2632 c         2741 g         1478 t
ORIGIN      
        1 gctgatcatg attgttatcc ggctcgcccc gattgccgtt gcctgcttca tgttcaatct
       61 cgccgccttg ttcggatggg acctgctgat ccggttgtcg gcctatgtcg gcgtggtcct
      121 tctggcgctt gcgatccaga tgttcgtggt attcccgatc ctgcttgcga cactcggcaa
      181 gaaaaacccg ctcgctttct tccgcgagac ccaggaggcg agcgtgatgg ccttctccac
      241 ggcctcgtcg aacgcaacgc ttcccacctc gctcaaggtt gccgacgaga acctcaacct
      301 gccccggcga attgcaaggt tcgtcctcac catcggcgcc accgccaacc agaacgggac
      361 cgcgatgttc gagggcgtga cggtcatctt cctcgcgcaa ttcttcgggg tcgagctgac
      421 gctatggcag caggtgatgg tgatgctggt ctgcatcctc ggcggaatcg ggacggcggg
      481 cgtccccgcc ggctcgcttc cggtcgtcgc gctgatcctg gccatggtcg ggatcaagcc
      541 ggaggcgatc gccatcgtgc tgggcgtcga ccgcttcctc gacatgtgcc ggaccacgct
      601 caacgttgtc ggcgacctgg tggcggcgca ggtgatctcg gccgcggaac ccgacgagac
      661 gcaggtcgag gcgccgccgc agccggcgtg atggcgccct caccgaccct ggacgagatt
      721 ggcgacaggt accgggtcat cctctgcgac atctggggct gcatccacga cggcgtgaac
      781 ctttaccccg gcgccgcggc gcggcttgcg cgatggcgcg gcgagggccg aacgaccatc
      841 ctcatcacca acgcgccgcg aacggccgag gcggtggccc gccagctggt ccggctcggg
      901 ctcgatccgg agctgtggga cggcatcgcc accagcggcg atgcaggaat cgaggcgctc
      961 aataaggcgg cgcggccggt cgggttcatc ggcacccagt cggatcgggc aatcctcgaa
     1021 ggcagtggag taagaatcac ggacaccggc gatttcgacg agctcgcctg ctccggtctc
     1081 gacggcaggc gcaggcaggt cgccgaatat gaggagcaaa tccgcccgct ggccgagcgc
     1141 gacgtgctga tgcactgcct caatcccgac cgggttgtga tcctcgacgg tcagccggtg
     1201 ccgtgcgccg gcgcgatcgc cgaccggtac atcgaactcg gcggacgcgt cgaatggtac
     1261 ggcaagccct atccggcgat ctaccgccac gcgctgcgac tggccggcga cgctccaccc
     1321 gatcaaattc tcgcaatcgg ggacgggctg gagaccgaca ccctcggcgc cgcgcgaatg
     1381 gggatggatt gcgtttacgt caccggcggc atcgcccagg gacagtccat gcctgcgggt
     1441 ttcgcggcga agcacggcct tgacgactgg cgtccgctag cagtcgtcga gggccttcgc
     1501 tgacctgctg gcgggatgaa ggcggcgata ttcgcgccac agctgcaggc tcagtatcgc
     1561 gacgaacacg acagtgccga ttacgaaggc cgccgccgcg ccctgcaccc cgaagcgcca
     1621 gctgagcggc gcaacgatca cgaagtagac cgtagtcgcc actatccgcg ccgtcagggg
     1681 cgcatccgag cggtcgagcc ggtaaagcat cggctccagc ggaaaggaga tcatggcgag
     1741 gagcggggca atgatcagca ccgcaagcac cgggtatgcg ggagcgaact gcgatccaaa
     1801 catcagctgg atgagaggct ctccggcgaa ggcgaccaga aggacagcga ggactccgaa
     1861 catggccgcg atggcagcgc cacgaagcgt cagcttccac gggcgcttcg tccggggatc
     1921 gagccgcatc acctccgggt agaaagcgcg ggcgagcagg tcggtcggcc tttgcgcgct
     1981 gtcggcaagg gtcgcggcca cgcggtagaa agcggcgctc gcgggtccca gaaggccacc
     2041 gacgatcagc cttgcgatcg ggccccacgc agcggtcagg ctcgacgtca cgttgacccg
     2101 gatcgcgaac ttccaggcgc ccttgagcgg atgcggcctc agcgtcggcc ggagtgcatc
     2161 ggccatgtcg cggcgcttga gctcgcggtg ggtcagccac cacatgtaga gatcgccgcc
     2221 aaggtcggtg acccaccaga tcgcgatata gatttcgaat ggcgcgtcgc ttgcccaggc
     2281 gatcgcagcg aggaccatgc gcgcgatggg gtaggtgatc ccgccccagc tgacgaggtc
     2341 gaaccggtcg agggtccgaa gcaccccgct tggagtcatc gcctgcatcg tggggatgac
     2401 ggtgcagtag agtatcgaga gcaggatgta gcggtcggga atgccgaacc agccgccgat
     2461 cagcggaagc acggccatcg ccagaagcat tccaacgatg ccgctgagga tgtcgaggcc
     2521 gaacgaaaag ccggtcgcga ccttgaagtc ctccggccgc ccggcaacca gtccctcgcc
     2581 tccatagcgg acgacgatct gccacgactg gaacttgctg aggctgctcg ccgcctgcgc
     2641 gtagctgtgg atcaggatca gaagcccgaa catcatcacg ccgagcgcgc gcccggtgat
     2701 cgccagcgtc acgaccgcgg caattgccgc gacgatccgg gacgcgccaa gatagctgct
     2761 gttcttcagc agcgaccgca tgtgctggtc tttgaaccaa tggcgcattc gcgccgctta
     2821 atcgaaagac agagggctgt cgctagggcc tatgccggct cggggacgct ttgccggacc
     2881 accttgtcgg cgagcgggcc gttgagctcg gcgagatgat cgaactcggc ctcgtagctg
     2941 gccaggccct ggctttgcga ccgaagctca gcctccagcc cgctaagctc agcttcgggg
     3001 ataattgcgt cgatccggtc ccagcctgtc cagccgtccc tcggcgccat gcccagcatc
     3061 tggccgcgcc ggctcgcgac agccgagctc acacggcttg cagcgctgga cgggcagacg
     3121 acgccgacct tctgcatcgg ctcgagcagg tgcggcccgg ccgcggccag tgcttcggcc
     3181 atggcgaggc gtcccgccag ccggaatgcc agttccgagc tgtcgacgct gtgatagctg
     3241 ccgtcgatca aggtcaccgc gacatccacg accggaaagc cgaggggccc cttgcgcatc
     3301 gcctcccgga ctccgtcctc gacggccggg atccattgct tgggaattgc gccgcccgtg
     3361 atcctgtcgc cgaactggaa gcccgatccg cgggggagcg gcttcacctc gatgatgacg
     3421 tcgccgaact ggccgtggcc gccggactgc ttcttgtggc ggcccttctg ggtcaccgtc
     3481 ttacggatcg attcgcggta gccgatcgtc ggcgcgtgcg acttcacttc gactccatag
     3541 cggcggctga ggcgggcgag cacggtcttg aggtgctcgt cattgactcc ccggagccgc
     3601 atttcgtggg tctcctcgtc ctgctcgagc acgagcgcgg gatcctcctc gagaagccgg
     3661 tgaagggcgc cggacagttt cacatcgtcc ttgcggtcgg caggctcgat cgcgaacgcg
     3721 cagttgaggg aaggaagctc gacgtcgatt gggggcggga cggtgccgct gctcagccac
     3781 tccccggctt tgacatggtc gatcttggcg accgcgacga tgtcgccgtt ttttgcctcc
     3841 gaaactttct gggtgcgttc tccctgcacc cgaaacaagg cgccgaggcg cgcggtctcg
     3901 ccgtttcgag tcctgaggtc ggagccttcg cttattcggc cgccgagcgc tcgagcgagc
     3961 gcaagccggc cgaccgttcc gccgctgtgg atcttgaaca cgtgcagcga tggatcgctg
     4021 acctcgagcc ggccggcagt gctttccggc cccggcgttt cgtgacgcaa cgccttgaga
     4081 agacgtccaa gcccccagcc gctctcggca gagccgaaca gcaccggaac cgcgaggctc
     4141 tctccggtct cgcgggcaag gtctttgagg acgcggtcct gctcgggcgg ctgttccatc
     4201 accagctgct cgagaagctc gtcgtcatgg tccgccagct gctcgagcat ctggttgcgc
     4261 gcttcctgct cgcggtcctg gatttcgccg gggatgtcga tctgctcgct gtccttgccg
     4321 ttgtaatgaa aggcccgttc gagcgccaag tcgacgaagc cggtgatctt ctcgccgtcg
     4381 cggatcggaa tctgcctcgc gatcagcggt gacacgctga cgggctgcaa ggcggagagg
     4441 aggtcgcgga tccggccgtg cgcctggtcg attcgattga cgaagaggat atgcgggatg
     4501 ccctgctcgt cgagcgcgcg aagagctggc gccgcgagag gggcgcgcgc ggggtcggga
     4561 tcgacgacga cgatggcgag gtcggcgagc gctatggcgc gggctccgtc ggcggtgaag
     4621 ccgactgacc cgggcgtgtc gatcagcgcg aaatgatcgt cgaggaaatc gaaattatag
     4681 aggttgagct cggtcgagcc gccgcgcgat cgcgcttccg ggctagagtc gccgatgctt
     4741 gtgccgttgc cgacggagcc gtggcggtcg gtcgctccgg ccgcgaacag gatcgcttcg
     4801 gcaacgctgg tcttgcccgc gccggccggt ccgaccagcg cgattgctcg agtgccgttg
     4861 gaattgacgc catttgcgtg gggcatgcga ctctcctctc gtccgtgtca gcgggcgcgc
     4921 gagtcgcttc tttatgaagg cgctcacgcg ctcttccgaa acgaacagcg tcggacggaa
     4981 tcgtttcgaa cgcaagcccc ccggaacggc agtccggctc aggttttgtt cgcttgatgg
     5041 cgaagcggaa aggcagagca gccgacaggc acggccaccg ggtgacatcg ccgtggcgaa
     5101 tgccgtcgca ggcgtggaag gacattgcgt cgcgaacctg gaagcgggcg tggcaggaca
     5161 atgtcggcct cgtcgccgcg ggcgtcactt attacggctt cctcgctctc gttcctctgc
     5221 tcggcatgat cgtgctcgca tacggcgtgc tcgccgaccc ggagaccgtc gttcgcaacg
     5281 tgcgcgcgat tacgatgatt cttccgcccg acgcggccca gctgatcgcc gaccagctca
     5341 ttgccgcggt caagatgacc agggagacga ggggctttgg cattctggtt gcgcttcttg
     5401 ttgccctgta cggcgggacg aacggagccg gggcgatcat cggggctctc aacatcgctt
     5461 atgtggagaa ggagaagagg tcgcttggac gcttttacct catcgccgcg gcgataacgc
     5521 ttggtggcgt tgtcctggcg ctgcttgcgc tggtcgcggc gacgagcctg acattcctta
     5581 caaatctggt gccgggggta tccggagtgg tcgtcggcgt ggggaaaatc ggcggctatg
     5641 cggcgctgac tttggccgcc gcggcggtcg cggcaacgct ctaccggttc gcgccgtcgc
     5701 gcgaacatgc gcagtggcaa tggatcacgc ccgggtcgct gttcgcggct atcatctggc
     5761 tgctgctgac gctggttttc agcttctacg tcacatcggt gaccgattac ggtgcgacct
     5821 acggatcgct ggggacgatc atcgtcctgc tgacctggat ctacctgtcg gcctatgcgc
     5881 tgatcgtcgg ggccgagctc aacagcgaga ttgagcacca gacggccaag gacagcacca
     5941 ccggcaagcc gcggcccatg ggcaagcgcg gcgcctgggc agccgacaat gtcgctaagg
     6001 acgacgagcc ggacgtaagg aaagtgccgt cgatggcaga ggcgatgccc gacgcgccga
     6061 cgcagaagaa gttcaaaacg gagaagcgct aacccgcctc aggcggccgg aagcaatttc
     6121 ttctcgccgg caagcttgat cagcgaggac tgcagcttct cgaaagcgcg gacctcaatc
     6181 tggcggatcc gctcgcggct gacgccgtag acctggctga gctcttcgag cgtcttcggg
     6241 tcgtcggtca ggcggcgctc ggtgaggata tgcttctcgc gttcgttgag gctgtccatc
     6301 gcatcgacga ggaggtcgtg ccgcacctga ctctcctccg cctcggcgac cagctcgtcc
     6361 tgaagcgggc cgctgtcgac aaggaagtcc tgccactggc tctcgccgcc ctcgtcgccc
     6421 ttcaacgaaa cgttgagcga ggtgtcgccg cccatcgaca tgcggcggtt catcgagacg
     6481 acctcgtcct cggtcacccc gaggtctgtg gcgatcttgg tcacgtcctg cggcttgagg
     6541 tcgccctctt cgaaggcgtc gatctggttc ttcatccggc gaagattgaa gaacagcttc
     6601 ttctgcgccg ccgtcgtgcc catcttcacg aggctccacg agcgcaggat gaactcctgg
     6661 atcgaggctc gaatccacca catcgcgtaa gtcgcgaggc ggaaaccgcg atcgggctcg
     6721 aactttttca cgccctgcat gaggccgata ttgccttcgg aaatgagctc gctcaccggc
     6781 aggccgtagc cgcggtagcc catggcgatc ttcgccacga gccgaaggtg ggagttgacg
     6841 agcttggccg ccgcttccgt gtccccgtgc tcgcgccagc gcttggcgag catatattcc
     6901 tcctcagggg cgaggatcgg gaatttcttg atttcggcaa gatagcggtt gaggccggct
     6961 tccccgcctg atgcgggaat cgacatcgcg ccgccagatt ttgctgccat ttcgatccat
     7021 ctccctgtgg ccgcgcgctt cttgggcgag cgcttggccg cttctattct tatacacgaa
     7081 gtcgagtgaa cagttcctgc atgtcggctg gcatgccact tgagaacgac aggcggtgct
     7141 tcgttacggg atgagtaaat cccagccttg cggcgtgtaa agcctgtcgg tgaaagtcca
     7201 attctttcaa cagctcgcga tggggcctcg aacggccata aacggggtcg ccgagcaaag
     7261 ggtggcccag ggacgccata tggacccgca cctggtgggt ccgcccggtt tcgagcgaac
     7321 attcgaccag tgccgcgtcg tcgagtattt cgaggcgctt ccagtgagtt acggcgcgcc
     7381 tgccgcgtcc gtcttcgact atcgcaatct tcttgcggtt agaggccgac cgcgccagcg
     7441 gggcatcgac ggtgccgccg ctgctcttgg gaagcccgga gacgattgcg aggtacttgc
     7501 ggtcgatgct gtgcgcggcg aattgcttcg ccagtccttc gtgggcgacg tcgctcttcg
     7561 ccacgaccaa gagaccggag gtgtccttgt cgatcctgtg cacgatgccg ggccgcgcaa
     7621 caccgccgat cccggacaac gactcaccac agtggtgaag aagtgcgtta acgagggtgc
     7681 catcgcggtt ccctgccgca ggatgcacga ccagccccgc gggcttgtcg ataaccagca
     7741 ggtgcgggtc ctcgaagacg acttcgagcg ggatttcctg cggctcgttg tgcgccggct
     7801 cgggttcggg aacctggagc aggaaccgct cgtcgccgcg aaccttcgtc gcggggtcgc
     7861 ggagcggtgt ttcgcccgat gtgaggccgc cggaacggat gagcgccttc agcctctcgc
     7921 gcgacagggt cggcaccgcc gcagccagcg cgcggtcgag ccgccagccc gactgagccg
     7981 gctcgagttg cacctcgatg gtctgcgttc cccccacagc agcgatatgg gtgcgccgca
     8041 aaatggcttc aagcggcggt gtttttcggc ggtcgcggcg gccgaaacgc agcgaacgca
     8101 gcgaacgcta cgcgcgcgtg cgtgcgcgcg cgaggcgacg gcgcacgagc agagtcgagg
     8161 caagaggagg acggcgccgg aaacctcatc cggcagctta aggcacacta gtgcttctgt
     8221 aggacaggat cttgtg
//
LOCUS       DATAKH010000010        16937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_11833,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000010 DATAKH010000000
VERSION     DATAKH010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 16937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16937
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11833"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1207
                     /locus_tag="VHN55_00250"
     CDS             <1..1207
                     /locus_tag="VHN55_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010336085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEX2802406.1"
                     /translation="EFEERFIAIGLPYQIIGGFRFYERAEIRDALAYLRLIHQPADDL
                     AFERIVNQPKRGLGDKALATIHAAARAQQQPLLIAAASLLDSDELQARARNPLGRFVA
                     DIARWRQMADATPHAELARIVLDESGYTAMLQADRSAESAGRLENLAELARAMEEYEN
                     LSGFLEHVSLVMDNDEDRDRDKVTIMTMHAAKGLEFDTVYLPGWEEGIFPSQRALDEG
                     GLASLEEERRLAYVAITRAKRRSTILHAANRRIYGQWTSSLPSRFVAELPEDHIETET
                     TMSGGESLWRAQWSEHADPFAHVARANARGPGWQRAAFSSPSSAGGRGVAERRGLNDA
                     YVRPPIEVKASAVSLGNKGRDDLELGQRVFHQKFGHGTIAAIEGNKLEIDFEHAGRKK
                     VLDSFVSSG"
     gene            1221..1538
                     /locus_tag="VHN55_00255"
     CDS             1221..1538
                     /locus_tag="VHN55_00255"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2802407.1"
                     /translation="MPITSPTVRDNPERKRFEIDLGDGSFAFAEYTLPEGKIMFTHTE
                     VPSAHEGQGFGTMLIRAALASAREQGLKVIPICPFFAAYMAKHADVQDLLDDAWRRKF
                     GLQ"
     gene            1648..2283
                     /locus_tag="VHN55_00260"
     CDS             1648..2283
                     /locus_tag="VHN55_00260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802408.1"
                     /translation="MTEATSVTTFVVGSRLPWPEDAAARDDNGPFEAGVIHDCGIRQE
                     CSIRKISALGATVRTRVQQARGELVTIELPTGQRASATVEWAKDGDTGIVFDKPIDVL
                     ALINRTLISQPTDRRAMPRVEIRCGAYVKRGGDFLAATVRNISSRGLQLEGDNLPPTG
                     SYVAVFVEGLNVPPGEIAWRKHKLAGVELLEELSWASLMPWIRETIRKQAN"
     gene            2486..2695
                     /locus_tag="VHN55_00265"
     CDS             2486..2695
                     /locus_tag="VHN55_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX2802409.1"
                     /translation="MPTGTVKFFNASKGYGFIQPEDGGQDAFVHITAVEKAGMRTLNQ
                     DQKVSYELQQDQRGKTSAVNLQPAD"
     gene            2774..2980
                     /locus_tag="VHN55_00270"
     CDS             2774..2980
                     /locus_tag="VHN55_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017664973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802410.1"
                     /translation="MTDRETYLARAAEARAQADAATLDNVRDRCLRSEAAWSEMAARA
                     ERTERMRQTLLADKAKAAEAAADK"
     gene            complement(3272..3347)
                     /locus_tag="VHN55_00275"
     tRNA            complement(3272..3347)
                     /locus_tag="VHN55_00275"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3312..3314),aa:Lys,seq:ttt)
     gene            complement(3363..3854)
                     /gene="folK"
                     /locus_tag="VHN55_00280"
     CDS             complement(3363..3854)
                     /gene="folK"
                     /locus_tag="VHN55_00280"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEX2802411.1"
                     /translation="MAGANHLYAIAIGSNRRHGRYGRPQQVVEAAIARLDRDFGLFDA
                     SPILLNRAQGGAGRDFANSVALVESDCEPPEMLRALKRIEREFGRRRGRRWGSRVLDL
                     DIVDWSGGNWRSRTLTVPHPAAANRAFVIEPLAAIAPGWRLDSPLSARHLAHRLARRR
                     PRS"
     gene            3878..4546
                     /locus_tag="VHN55_00285"
     CDS             3878..4546
                     /locus_tag="VHN55_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX2802412.1"
                     /translation="MSFASPADRSPVPQAEAPRDCPLCPRLVRLREQLRGEHPDWWNA
                     PVPAFGDSDAWLAIVGLAPGKKGANRTGRPFTGDYSGEIFYSTLLQFGLAEGEYRGET
                     DDPLTLKGTVVVNAVKCLPPGNRPTPEEVNTCSAYLEASLAALADVRVVIALGQIAHV
                     AAARTLGLWPKAKFAHLAEAAAADGRVLLSSYHCSRQNTNTGRLTREMFADVFERACR
                     IGRR"
     gene            4533..5039
                     /locus_tag="VHN55_00290"
     CDS             4533..5039
                     /locus_tag="VHN55_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2802413.1"
                     /translation="MAGDDVIRTERLVLRRARSDDASALHRLFTNPVAMRYWSRPVHE
                     QMEQTENWLQSMLDPPTAETDDFIVTLDGALIGKLGCWQLPDVGFMLDPDLWGRGYAY
                     EAFTAFIERRRRLGSSHLTADVDPENEASLRLLKRVGFNETGREARTWNIAGEWRDSV
                     YLRLDLTT"
     gene            complement(5036..5887)
                     /gene="aguB"
                     /locus_tag="VHN55_00295"
     CDS             complement(5036..5887)
                     /gene="aguB"
                     /locus_tag="VHN55_00295"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010406163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0050126 - N-carbamoylputrescine amidase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidase"
                     /protein_id="HEX2802414.1"
                     /translation="MSKITVAALQLAFGEDTDANIRAVSELVREAHSRGAEVVLPPEL
                     FEGPYFCREEDESLFANAKPTAEHPSVLAMQALAAELKIWIPTSFFEAEGPHHYNSLA
                     MVGPDGKVAGVYRKSHIPDGPGYEEKFYFRPGNTGFKVWPGPHKATLGVGVCWDQWYP
                     ETARAMMLMGADILFYPTAIGSEPHDPDLDTSRLWRRAMIGHAVSNVVPVVAANRIGT
                     ECGQRFYGHSFICDERGDMLAEFGAEETGALIATLDLSAAKKHRAAFGFFRDRRPELY
                     ARLIEDI"
     gene            complement(5884..6861)
                     /locus_tag="VHN55_00300"
     CDS             complement(5884..6861)
                     /locus_tag="VHN55_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010406159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEX2802415.1"
                     /translation="MAAFALPEWAPHQAVWIGFPSDPELWLADLAPAQREVAAFAEAV
                     HSRGKGEQVWLVASHEDSAAAARRLAPFAKVIVEPFGDIWLRDTGPILCGSGKDRRAQ
                     GFRFNGWGGKYDLPGDDTIGRRLAAHSGFAYAQADWVLEGGAIDQDGSGTVVTTEQCL
                     LNPNRNSTMGRDEVDQALRRDLGFERVIWLGEGLANDHTDGHVDNLARFVAPGRLAIP
                     TPAKDDPNTAIYRDAARRLRKTKLDVVTLPSPGTVTNADGDIVPASYMNFYIGNAAVV
                     VPQYGVANDRAAVDVVQALFPGRVAIGLRADHILTGGGSFHCISQQVPA"
     gene            6988..8766
                     /locus_tag="VHN55_00305"
     CDS             6988..8766
                     /locus_tag="VHN55_00305"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX2802416.1"
                     /translation="MVRYLIAAALLVLASGVEARVDYAIDLTAPEHHTGKVTILFPET
                     PGPFLDVKMPAWRTGRYTIEDLANGVRGFTATDSKGQPLRWQKIDKSTWRVQLPQLAS
                     VRISYGLYANELALRTRHIDDSHAYLDASAVFMYADRYRGDDVTVALQVPPAWNSVSG
                     MRSAGPNRFVAPNWDILVDSPIETGIHKLYRFSEGGQDYEVLFWGKGNYDAEQAVSDL
                     KAMVAEADTIWSSYPFDRYVFMIHATDGPGGGATEHRNSTVIQFPRDYFQPRRRYMSF
                     LSTASHEFIHTWNVKAYRPAGLVPYNYQSENYTDLLWVAEGSTSYFTEHLLLRSGLMK
                     PDEFFESLASEIEHNRHTPGTDVQSVAEASFDEWISVSGDRARNASVNIYSEGSLVSW
                     MLDIALLQQTGGKVSYRDVHEVLYRRFDADERGYTSRDMLAILAELTGKSWEAWWARN
                     VESPVGAVDFEALLKPVGLTAREEGPKVAWAGWSGRPDDGAVRLTSVERGSPAWNAGF
                     TIGDIIVAIDGKTIAADGFESAFGDYAPGATVTVSYVRRSEPGEKRITLGSVAKDGIK
                     VVPVERPTRAQKALFQRWLLIPYPSK"
     gene            complement(8815..9429)
                     /gene="rpsD"
                     /locus_tag="VHN55_00310"
     CDS             complement(8815..9429)
                     /gene="rpsD"
                     /locus_tag="VHN55_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEX2802417.1"
                     /translation="MSKRSSAKYKLDRRMGENVFGRPKSPVNRREYGPGQHGQRRKGK
                     LSDFGIQLRAKQKLKGYYGDITEKQFKRTYTEASAMKGDASQNLIGLLERRLDMIVYR
                     AKFAPTIWAARQLVSHGHIRVNGVKCNIASRRVDVNDVIELGPKAQEMALVIEAQSLA
                     EREVPDYVVPDGTSKVTFTRVPTLDEVPYPVRMEPNLVIEFYSR"
     gene            complement(9563..10300)
                     /locus_tag="VHN55_00315"
     CDS             complement(9563..10300)
                     /locus_tag="VHN55_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX2802418.1"
                     /translation="MADSAPKPVIVLVRPQLGQNIGKAARAMLNFGLVDMRLVAPRDG
                     WPNPDAGPAASGADTVLERAQVFATVQEAIADCSTVYASTVRRRDLVMPVVTPEAMAA
                     EIAASTAPAAILFGPERSGLETEEVALANAIVTVPINPEFASLNLAQAVILLAYEWSK
                     QSALAVPPEKDLEPPAPHSDLDGLVRQLDEALETKGYFHPPSRTQATRNTLRTIFTKT
                     GWSSREVKAIRGVIRALVEAPRNRGKA"
     gene            complement(10290..10742)
                     /gene="nrdR"
                     /locus_tag="VHN55_00320"
     CDS             complement(10290..10742)
                     /gene="nrdR"
                     /locus_tag="VHN55_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEX2802419.1"
                     /translation="MRCPFCTHEASQVKDSRPSEDGASIRRRRQCEACGARFTTFERV
                     QLRDLTVVKKSGEREPFDRAKLERSVSIACRKRNISNEQIERLITSIQRQLETRGDEV
                     TTTQIGEAVMDGLKALDHVAYIRFASVYKDFSEPGDFAEIAGAVGDGG"
     gene            complement(10746..12056)
                     /gene="glyA"
                     /locus_tag="VHN55_00325"
     CDS             complement(10746..12056)
                     /gene="glyA"
                     /locus_tag="VHN55_00325"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011445883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEX2802420.1"
                     /translation="MASAANLNDVQPKGFFTDGLKQADPEIADAIANELGRQREKIEL
                     IASENIVSKAVLEAQGSILTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAGF
                     ANVQPNSGSQMNQAVFLALLEPGDSFMGLDLNAGGHLTHGSPVNMSGKWFHPVPYGVR
                     RDDQLLDMDEVARIARENRPKLIIAGGTAYSRIWDFAAFREIADEVGAFLMVDMAHFA
                     GLVAGGVHPSPVPHAHVVTTTTHKSLRGPRGGLILCNDEAIAKKMNSAVFPGLQGGPL
                     MHVIAAKAVAFKEALQPDFKVYAKQVVANARALAKALEGEGLDIVSGGTDNHLMLVDL
                     RPKQAKGKHAEKALDRASITCNKNGIPFDPEKPFVTSGIRLGTPAATTRGFGEAEFQL
                     VGSMIAEVVDGLRKNGEEGDAQVEQSVARRVEELCARFPIYPDL"
     gene            complement(12056..12502)
                     /gene="rpiB"
                     /locus_tag="VHN55_00330"
     CDS             complement(12056..12502)
                     /gene="rpiB"
                     /locus_tag="VHN55_00330"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEX2802421.1"
                     /translation="MRIALASDHAGFALKDELAAWLRDGGHVVLDLGTNGPESVDYPE
                     FGARLANSVASGEAECGIAVCGSGIGISIAVNRNPACRCARVDDPLSARLAREHNDAN
                     VLALGGRLIGADMARACVTEFLGTDFAGGRHQRRVDQLSQLLQESD"
     gene            complement(12743..13132)
                     /locus_tag="VHN55_00335"
     CDS             complement(12743..13132)
                     /locus_tag="VHN55_00335"
                     /inference="COORDINATES: protein motif:HMM:NF016161.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HEX2802422.1"
                     /translation="MEPFYLEIRAAHIGAVAASGLLLLLRAVPRNVAGATWVMAWPVR
                     LLSYTVDTVLLTAALMLTTIIRQYPFVDNWLTMKLLLLVLYIMLGYWALRGRSAAIRW
                     GSLAGAGVVYAFIITVARAHSPLGLFA"
     gene            complement(13139..15460)
                     /locus_tag="VHN55_00340"
     CDS             complement(13139..15460)
                     /locus_tag="VHN55_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004212696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEX2802423.1"
                     /translation="MTSTRKLWTLLTVLLVVSFGVLLLVGRDISFKMPPMPEQVVSQS
                     GETVYTRADIERGRQVWQSMGGMQLGSIWGHGGYVAPDWSADWLHRESIAILDGWSGG
                     RGYARLPAEQKAQLEGRLQDIMRPNTYDPATKTITLAAERAEAIRTVSRHYESLFGDD
                     PATATLRENYAMKNGTVPDPEHRRALSAFFWWTAWAATTQRPDSKVTYTNNWPSEPLV
                     DNRPPSTTFIWSAFSVTFLLAGIALLGWHHASTHGRREAEEKKHDLPRSDPLRGIKIT
                     PSMRATAKYFWVLLALFLVQILFGAMTAHYQVEGQLVYGYEAAEILPYSITRTWHTQL
                     AVLWIATAWLGTGLYMAPAISGYEPKFQALGVNILWVCLLIIVVGSFAGQWLAVMQTL
                     GLENNFWFGHQGWEYADMGRFWQWFLFLGLLIWLTLVGRALWPALKENNEWRSITALF
                     FLSAVAIGLFYGAALLWNEHTHISIVEYWRWWLVHLWVEGFFEVFATAVIAFLFTRLG
                     LIPVKIATVAVLFATIIFMAGGVLGTLHHLYFAGTSTAVLALGASFSALEVVPLAYIG
                     FEAYDHWRLASATPWMQRYRWPVMFFLSVSFWNLVGAGLFGFLINPPLSLYYMQGLNL
                     TPLHGHTALFGVYGMLGIGLVLFCLRGMRPDLKWDERVLRISFWCFNIGLAMMAVFTL
                     LPLGTLQLLAAIDQGYWFARSHEFMQQPIVELLIWMRVPGDTVFSIGALALTYFVARL
                     WLWPQREDDRGESVVLEGGAMPKGSRAKPATAK"
     gene            complement(15545..16756)
                     /gene="hemA"
                     /locus_tag="VHN55_00345"
     CDS             complement(15545..16756)
                     /gene="hemA"
                     /locus_tag="VHN55_00345"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011445447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HEX2802424.1"
                     /translation="MDYDSIFKSAIERLHGEGRYRVFIDILRTKGSYPNAHCFGGNGP
                     KPVIVWCSNDYLGMGQHPAVIEAMETALHQVGAGSGGTRNISGNTHYHMELEAELASL
                     HGKEGALLFTSGYVSNEAALSTIGKLLPGCVIFSDELNHASMIAGIKNSGCEKRVFRH
                     NDLEHLEQLLSECEDGTPKLIAFESVYSMDGDIAPIAAICDLADKYGALTYLDEVHAV
                     GMYGDCGGGISERDGLAHRLTIIEGTLGKAFGVMGGYIAASRTIIDCIRSYAPGFIFT
                     TSLSPVLVAGALASVRHLKTSPTEREAQQAAAATLKKKFASAGLPVMPSVTHIVPVLV
                     GCPIKAKRISDVLLAEYGLYVQPINFPTVPRGTERLRFTPGPCHTTEMMDELTSALIE
                     IWGRLELKLAA"
BASE COUNT         3138 a         5352 c         5476 g         2971 t
ORIGIN      
        1 cgagttcgag gagcgcttca tcgcgattgg cctgccgtac cagatcattg gcggcttccg
       61 cttctacgaa cgcgccgaga tccgcgacgc gctcgcctat ttgcgcctca tccaccaacc
      121 ggcggatgac cttgccttcg agcggatcgt caaccagccc aagcgcggtc tcggtgacaa
      181 ggcgctcgcc acgatccacg ccgccgcgcg ggcccagcaa cagccgctcc tcatcgccgc
      241 cgcctcgctt ctcgacagtg acgagctcca ggcccgggcc cgcaacccgc tcggccgctt
      301 cgtcgccgac atcgcccgct ggcggcagat ggcggacgca acgccgcatg ccgagcttgc
      361 ccggatcgtc ctcgacgaga gcggctacac cgcaatgctc caggccgacc ggtccgccga
      421 atccgccggc cgcctcgaaa acctcgccga gctcgcccgg gcgatggagg aatatgagaa
      481 cctctcgggc ttcctcgagc atgtcagctt ggtgatggac aatgatgagg accgcgaccg
      541 cgacaaggtc acgatcatga ccatgcatgc cgcaaagggc ctggagttcg acaccgtcta
      601 tttgccgggc tgggaggagg ggatattccc gtcgcagcgc gcgctcgacg aaggcggcct
      661 cgccagcctc gaggaggagc gccgcctcgc ctatgtggcg ataacccgcg ccaagcgccg
      721 ctcgacgatc ctccacgccg ccaaccgccg gatctacggc cagtggacca gcagtctgcc
      781 gagccggttc gtcgccgagc ttcccgaaga ccatattgaa acggaaacga cgatgtccgg
      841 cggcgaaagc ctgtggcggg cgcaatggtc cgaacacgcc gaccccttcg cccatgtcgc
      901 ccgcgccaac gcccgcggcc ccggctggca gcgcgcggcc ttttcaagtc cttcctccgc
      961 aggcggaaga ggagttgcgg agaggagggg tctgaatgat gcctatgtcc gcccgccgat
     1021 cgaagtgaag gccagcgcgg taagcctggg aaacaagggg cgcgacgacc tcgagctggg
     1081 ccagcgagtc ttccaccaga agttcggcca cggcaccatc gcagcaatcg aaggcaacaa
     1141 gctggaaatc gacttcgaac acgccgggcg caaaaaggtg ctggattcgt tcgtgagctc
     1201 cggctgaaag cgcattctcc atgcccatca caagccccac cgtccgcgat aatcccgagc
     1261 gcaagcgctt cgagatcgac ctcggcgacg gctcatttgc cttcgcggaa tatacgttgc
     1321 cggaaggcaa gatcatgttc acccacaccg aagtgccgtc ggctcacgaa gggcagggct
     1381 tcggcacgat gctgatccgc gccgctttgg cttcggcgcg cgagcagggg ctgaaggtta
     1441 tcccgatttg cccgttcttc gcggcgtaca tggcaaagca tgcggacgtt caggacctcc
     1501 tcgacgatgc atggcggcgg aagttcgggc tgcagtaaga tccgacatcg gatgcggtcc
     1561 tccacctggg ctcaaagcaa ggaccgttag ccacttgtta gcacccttgg gcgcaggctc
     1621 tcgcgcgcat ggtgccggac caatcgaatg actgaagcga cgtcagtcac gaccttcgtg
     1681 gtgggatcgc gactcccatg gccggaagac gcggccgcca gagatgacaa tggcccgttc
     1741 gaagcgggcg tgatccacga ctgcggaatc cggcaggaat gctcgatccg caagatatcc
     1801 gcgctcggag cgacggtccg gacgagagtg cagcaggcgc gcggcgaact ggtgacgatc
     1861 gagcttccga ccgggcagcg cgcttcggcc acggtcgaat gggcgaagga cggtgacacc
     1921 ggaattgtgt tcgacaagcc aatcgacgtc ctggcgctaa tcaatcgcac gcttatcagc
     1981 cagccaaccg accgccgggc aatgcctcga gtcgaaatcc gatgcggcgc ctatgtgaag
     2041 cgcggcgggg acttcctggc ggcgactgtg cgcaacatct cttcgcgcgg gctacagctc
     2101 gagggcgaca acctgccgcc gaccggaagc tatgtcgcgg tgttcgtcga ggggctcaac
     2161 gtccctccgg gcgaaattgc ctggcgaaaa cacaaactcg ccggggtcga gctgctggag
     2221 gaactcagct gggcatcgct gatgccgtgg attcgggaga cgattcgcaa gcaggcgaac
     2281 tgaatgccat gggcgcgggc aagcacccgc tgcgccggcg aatcccacgc gcacttacat
     2341 tttgaagccg cagggcctat atggccctcg ctactagtcg caaacggacg gtctcaagag
     2401 cgctttgcgg ctcctcattc cttctcttcg cactcctagc gtgaggaccg attcgcggtc
     2461 cggacaagaa ctgaaggaac tgaatatgcc aacaggcacc gtaaaatttt tcaatgcatc
     2521 gaagggctat ggattcatcc agcccgagga cggcggccag gacgctttcg tccacatcac
     2581 cgcggtcgag aaggcgggaa tgcgcactct caaccaggac cagaaggtca gctacgagct
     2641 tcagcaggac cagcgcggca agaccagcgc ggtaaacctg cagcccgcag actaataaaa
     2701 gcaagggcgg ggccgccgtc gcggcggccc cgctttcgca tttggaattc aagccaagcc
     2761 cgacatggga acgatgaccg acagagaaac ctaccttgcc cgagccgccg aagcgcgcgc
     2821 ccaggccgac gctgcgaccc tcgacaatgt gcgggaccgc tgcctcaggt ccgaagccgc
     2881 gtggagcgag atggctgcta gagccgagcg taccgagcgc atgcgccaga cgctcctcgc
     2941 cgacaaggcg aaagccgcgg aggcggccgc cgacaaataa gtgaaaacga aaaaagatgt
     3001 gtaagaataa agacaagttc ctgcgggcga gaacgcgccg caacccttcc aaaatttccc
     3061 tctttcagcg catgacgccg gcacaaagcc gccaggcccg tgcgatcgcc tacaaggctg
     3121 ctctcgccgt tatcggctaa gggtcggctt tccatttcag atttgatgct ggtgcgctcg
     3181 cttccctccc agcagcatgc tcgccagtcc ccggactggc tgcgcttgga gcactgtcct
     3241 ctacatgccc cggcatgtct gcgggcagtg ctggtgagcc ctgctggatt cgaaccagcg
     3301 acctactgat taaaagtcag ttgctctacc aactgagcta agggcccatc agcgccgccg
     3361 cgttagcttc gcgggcgcct tcgggcaagg cgatgggcaa gatggcgtgc cgacagtggc
     3421 gaatccagcc gccacccagg agcgatcgcc gccaacggtt cgattacgaa tgcccggttg
     3481 gcggccgccg ggtgcggcac cgtcagagta cgtgaacgcc aattgccgcc actccagtcg
     3541 acgatgtcga ggtcgagaac ccggctgccc caacggcggc cgcgtcggcg gccgaattcg
     3601 cgttcgatgc gctttagcgc gcgaagcatt tccggcggct cgcaatcgct ttccactagc
     3661 gcgaccgaat tggcgaaatc gcggcctgcg ccgccctgcg ctcggttgag gaggatcggc
     3721 gacgcatcga ataggccgaa gtcgcggtcg aggcgggcga tcgcggcctc gacgacctgc
     3781 tgtggccgcc cgtagcggcc gtgccgccgg ttcgatccga tcgcgatcgc gtacaggtgg
     3841 tttgcgccag ccacggccgt tcgcctacgg caggcgcatg tcgttcgcca gccccgccga
     3901 ccggtcgccg gtcccgcaag ccgaggcgcc acgcgactgc cccctgtgcc cgcggctggt
     3961 gcggttgcgc gagcagcttc ggggcgaaca tcccgactgg tggaacgcgc ccgtgcccgc
     4021 gttcggagac tcggatgcgt ggctggcgat cgtcggcctg gcgcccggca agaagggtgc
     4081 gaaccggaca ggcaggccgt tcaccggcga ctattcggga gagattttct attcgacact
     4141 gctccagttc ggcctcgccg agggcgagta tcggggcgag acagacgatc cgctcactct
     4201 gaagggcaca gtggtcgtga acgcggtgaa atgcttgcca ccaggcaacc ggcccacacc
     4261 ggaggaggtc aatacctgca gcgcctatct cgaagcctcg cttgcggcgc tcgccgatgt
     4321 gcgggtggtg attgcgctcg ggcagatcgc ccatgtcgct gccgcccgca ctctcggact
     4381 ttggcccaag gcgaagttcg ctcatttggc tgaagccgcc gcggcggatg gacgcgtgct
     4441 cctgtcgagc tatcactgct ctcgacagaa cacgaatacc gggaggctta ctcgcgagat
     4501 gttcgcagat gtgttcgaaa gggcgtgcag aattggccgg cgatgacgtc atccgcaccg
     4561 agcggctggt ccttcggcgc gcccgttccg acgatgcttc ggcgctgcac cggttgttca
     4621 ccaacccggt cgcgatgcga tattggtcga ggccggtcca cgaacaaatg gagcagaccg
     4681 agaactggct gcaatcgatg ctcgatccac cgaccgccga aaccgacgat ttcatcgtaa
     4741 ctctggacgg ggcgctgatc gggaagctcg gctgctggca attgcccgat gtcggattca
     4801 tgctcgatcc ggacttgtgg ggccggggtt acgcctatga ggccttcacg gccttcatcg
     4861 aacggcggcg ccggcttggc tcctcccacc tgaccgccga cgtcgacccg gaaaatgaag
     4921 cgtcgctgcg gcttctgaaa cgcgtcggct ttaacgagac aggccgcgag gctcgtacct
     4981 ggaacatcgc tggggaatgg cgcgacagcg tttacctgcg gctggacctc acaacctaaa
     5041 tgtcctcgat aaggcgcgcg taaagctccg gccgccggtc gcggaagaag ccgaaggcag
     5101 ccctgtgctt cttagcggcc gagaggtcga gcgtcgcaat aagcgcccca gtctcctccg
     5161 cgccaaattc cgcgagcatg tcgccgcgtt cgtcgcaaat gaaactatgg ccgtagaagc
     5221 gctggccgca ctcggtaccg atgcggttgg cggcgacgac cggaacgacg ttcgataccg
     5281 catggccgat catcgcccga cgccacaggc gggacgtgtc gagatcggga tcgtgcggct
     5341 ctgatccgat cgccgtcgga tagaagagga tgtcggcacc catcagcatc atcgcgcgcg
     5401 ccgtttccgg gtaccattgg tcccagcaca caccgacgcc gagcgtcgcc ttgtgcgggc
     5461 ccggccagac cttgaagccg gtgttgccgg ggcggaagta gaatttctcc tcatagcccg
     5521 gcccatcggg aatgtggctc ttgcgataga ccccggcgac ctttccatct gggccgacca
     5581 tcgccaggga attgtaatgg tgtggcccct cggcttcgaa aaagctggtc gggatccaga
     5641 tcttcagctc ggccgcgagc gcctgcatcg ccagcacgga cggatgctcc gccgtcggct
     5701 ttgcatttgc gaacaggctc tcatcttcct cgcggcagaa atagggcccc tcgaacagtt
     5761 cgggcggcag gaccacctct gcaccgcgcg aatgggcctc gcgcaccagc tcggagaccg
     5821 cgcggatgtt tgcgtcagtg tcctcgccaa aggcgagctg cagcgctgcg acggtaatct
     5881 tgctcatgcc gggacctgtt gcgagatgca gtggaagctt ccccccccgg tgaggatgtg
     5941 gtcggctcga agcccgattg caacgcggcc ggggaacagg gcctggacga cgtcgaccgc
     6001 agcccggtcg ttggctacgc cgtactgggg caccacgaca gcagcgttgc cgatgtagaa
     6061 gttcatgtag ctcgcgggga caatgtcgcc gtccgcgttc gtcaccgtgc cgggcgaggg
     6121 cagtgtgacg acgtcgagct tcgtcttgcg cagtcgccgt gcggcatcgc ggtagatcgc
     6181 ggtgttggga tcgtccttcg ccggagtcgg gattgccagc cggcccggag ccacgaaccg
     6241 agccagattg tcgacatggc cgtcggtgtg gtcgttggcg agaccctcgc ccagccagat
     6301 cacgcgctcg aagccgagat cgcggcgtag cgcctggtcc acctcatcgc gccccattgt
     6361 cgagttgcgg ttcgggttga ggaggcattg ctcggtcgtg acaaccgtgc ccgagccgtc
     6421 ctggtcgatg gccccgcctt cgagcaccca gtcggcctgg gcgtaagcga agcctgaatg
     6481 cgcggcgagc cgacggccga tcgtatcgtc gcctggaagg tcgtacttcc cgccccagcc
     6541 gttgaaccgg aaaccctgcg cgcgtcggtc cttgcccgac ccgcagagga tgggcccagt
     6601 gtcccgaagc cagatatcgc cgaacggctc gacgatcacc ttggcgaagg gcgccaatct
     6661 gcgcgccgcc gctgccgaat cttcgtgact cgcgaccagc cacacctgtt cgcccttgcc
     6721 ccgcgaatgc accgcttcgg cgaatgccgc gacctcgcgc tgcgcaggcg caaggtcggc
     6781 aagccacagc tccgggtcgg acggaaaacc gatccagacc gcctgatgcg gagcccattc
     6841 gggaagtgcg aaagctgcca tggcgctgcg cctagcgaac cgtctggttc aggcaagcgc
     6901 cttgcgccgg ttcgtttgtc gaagcggccc tgtttgaagc ggctttggct gctaacgatg
     6961 tgcgcgacga cggaggagaa tttgcaagtg gtaagatatc tgatcgcggc tgcgctgctg
     7021 gtcctggcga gcggcgtcga ggcgcgggtc gattatgcga tcgaccttac tgcgcccgag
     7081 catcacaccg gcaaggtcac gatcctgttt ccggaaacgc cgggcccgtt cctcgacgtg
     7141 aagatgcctg cctggcggac cgggcgctac acgatcgaag atctcgccaa cggtgttcgg
     7201 ggcttcacgg cgaccgattc gaagggccag ccgttacgct ggcaaaagat cgacaagtcg
     7261 acctggcggg tgcagctgcc ccagttggcg tcggtgcgca tcagctacgg gctctatgcc
     7321 aacgagcttg cgcttcggac ccgccatatc gacgacagcc acgcctatct cgatgcgtcg
     7381 gccgtgttca tgtacgccga caggtaccgc ggggacgatg tcaccgttgc gctgcaggtg
     7441 ccgccggcgt ggaacagcgt gtcggggatg cggtccgccg gccctaaccg cttcgtcgcg
     7501 cccaattggg acatcctcgt cgactcgccg atcgagaccg ggatccacaa attgtaccgc
     7561 ttctccgaag gtggccaaga ctatgaagtc ctgttctggg gcaagggcaa ttacgatgcc
     7621 gaacaggcgg tttccgacct caaggcgatg gttgcggaag cggacacgat ctggagctcc
     7681 tatccgttcg atcgctacgt cttcatgatc cacgccaccg acgggcccgg cggtggggcg
     7741 accgagcacc gcaactcgac cgtcatccag ttcccgcgcg actatttcca gccgcgcagg
     7801 cgctacatga gctttctttc aacggcctcg cacgagttca tccacacctg gaacgtcaag
     7861 gcgtaccggc ccgccgggct ggtgccgtac aattaccaga gcgagaacta caccgacctg
     7921 ttgtgggtcg cggagggctc gaccagctat ttcaccgagc acctgctgct ccggtccggg
     7981 ctgatgaagc ccgacgaatt tttcgagagc ctcgcgagcg agatcgagca caaccgccac
     8041 actccgggga ctgacgtcca gtcggtcgcc gaggcttcgt tcgacgagtg gatctccgtc
     8101 tccggcgatc gcgcccggaa tgcgtcggtc aacatctact ccgaaggttc gctcgtttcg
     8161 tggatgctcg acatcgcttt gcttcagcag accggcggca aggtttccta tcgcgacgtt
     8221 cacgaggtct tgtatcggcg cttcgacgcc gacgagcgcg gctacacgtc aagggatatg
     8281 ctcgcgatcc tcgccgagct gaccggaaag tcgtgggaag cctggtgggc gcggaacgtc
     8341 gaatctcccg tcggtgcggt cgatttcgaa gcccttctga agcccgtcgg actgaccgcc
     8401 cgtgaggagg gcccgaaggt cgcgtgggct ggctggtctg gccggccaga cgacggtgcg
     8461 gtgcggctga cgtcggtcga acgcgggagc cccgcctgga acgccggttt caccatcggc
     8521 gacatcatcg ttgcgatcga cggcaagacg atcgcagccg acggcttcga atcggcgttt
     8581 ggggactacg cgcccggcgc gacggtgacg gtcagctacg tgcgccgaag cgagccggga
     8641 gagaagagga tcacgctcgg atcggtggcc aaggatggca tcaaagtggt gccggtcgag
     8701 cgtcctactc gagcgcagaa ggcgctgttc cagcgctggc tgttgatccc gtacccatcg
     8761 aaataaaaag ggcggccgcg atggccgccc ttcaaagatc gctaacgcca gggattagcg
     8821 cgagtagaac tcgatgacca ggttgggctc catccgcacc ggatagggca cttcgtcgag
     8881 agtcgggaca cgagtgaagg tcaccttcga ggtgccgtcg ggaaccacgt aatcggggac
     8941 ttcgcgctcg gcgaggctct gcgcctcgat gaccagcgcc atctcctgcg ccttgggccc
     9001 gagctcgatc acgtcgttaa cgtcgacccg gcggctggcg atgttgcact tcacgccgtt
     9061 gacgcggatg tggccgtggc tgaccagctg gcgggcggcc cagatcgtcg gcgcgaactt
     9121 ggcgcgatag acgatcatgt cgagccggcg ctcgagaagg ccgatcaaat tctgcgaagc
     9181 gtcgcccttc atcgcgctgg cctcggtgta ggtgcgcttg aactgctttt cggtgatgtc
     9241 gccgtaatag cccttcagct tctgcttggc gcggagctgg attccgaagt cggaaagctt
     9301 gcctttccgg cgctggccgt gctggccggg accgtattcg cggcggttga ccgggctctt
     9361 gggccgtccg aagacgttct cgcccattcg gcggtcgagt ttgtacttgg cgcttgagcg
     9421 cttgctcaca tcaaatctcc aattcgcgtt tcaaagtttc ccggaaccgc accgactgcc
     9481 attggggcag gcgcgatcac cgcttcaccg ggaatgcggg atcaattgcg agcggcgcac
     9541 ctagggagcg gccgagagaa ggtcaagctt ttccgcggtt tcgaggagcc tcgacaagcg
     9601 cgcggatcac tccgcggatc gcctttacct cgcgcgagga ccagccggtc ttggtgaaga
     9661 tggtgcgaag cgtgttcctg gtcgcctggg tccgcgacgg cgggtggaaa tagcctttgg
     9721 tctcgagcgc ttcgtcgagc tgccggacaa ggccgtcgag atcgctgtgc ggcgcaggcg
     9781 gttcgaggtc cttctccggc gggaccgcga gcgcgctttg cttcgaccat tcgtaggcaa
     9841 gcaggataac cgcctgagcg aggttgaggg aggcgaattc gggattgatc gggacggtga
     9901 cgatcgcgtt ggcgagagcg acctcctcgg tctccagtcc cgaccgctcg ggaccgaaga
     9961 ggatagcggc gggcgcggtc gaagcggcga tctccgccgc catcgcttcg ggtgttacga
    10021 ccggcatcac gaggtcgcgg cggcggaccg tcgaggcgta gacggtcgag cagtcggcga
    10081 tggcttcctg gacggtagca aagacttgag cgcgctcgag cacggtatcg gcgccactgg
    10141 cggcaggtcc ggcgtcgggg ttgggccagc catcccgcgg cgcaaccaga cgcatgtcga
    10201 caagcccgaa gttgagcatg gcccgcgccg ccttgccgat attctgcccg agctgcggac
    10261 ggacgaggac gatgaccggc ttaggcgcgc tatccgccat cgccgaccgc gccggcgatt
    10321 tccgcaaagt cgcccggctc gctgaagtcc ttgtagacgc tcgcgaagcg gatgtaggcg
    10381 acatggtcga gggctttcag gccgtccatc accgcttcgc cgatctgagt ggtggtcacc
    10441 tcatcgccgc gggtttcgag ctggcgctgg atcgaggtga tcaggcgctc gatctgctcg
    10501 ttggagatat tgcgcttgcg gcaggcgatg gaaacggaac gctccagctt cgcccggtcg
    10561 aacggctcgc gctcgccgga cttcttgacc accgtgaggt cacgcagctg gacccgttcg
    10621 aaggtcgtga aacgtgcccc gcacgcctcg cactggcggc ggcggcggat tgacgccccg
    10681 tcctcagacg ggcggctgtc cttaacctgg ctggcttcgt gggtgcagaa ggggcagcgc
    10741 aacgcttaga ggtccggata gattggaaag cgggcgcaca gctcctcgac ccggcgggcg
    10801 accgactgct cgacctgggc gtcgccctcc tcgccgttct tgcgaagccc gtcgacgact
    10861 tcggcgatca tggagccgac gagctggaat tccgcctcgc caaagccgcg ggtggtcgca
    10921 gccggggtgc cgagccggat tcccgaggtg acgaacggct tttccggatc gaacgggatt
    10981 ccgttcttgt tgcaggtgat cgaggcgcga tcgagcgcct tttcggcatg cttgcctttg
    11041 gcctgcttgg gccggaggtc gaccagcatc aggtgattgt cggtcccgcc ggaaacgata
    11101 tccagccctt cgccttccag cgcctttgct agagctcggg cgttggcgac tacctgcttt
    11161 gcatagacct tgaagtcggg ctggagcgct tccttgaacg cgacggcctt ggcggcgatg
    11221 acatgcatca gcggaccgcc ctgaagcccc gggaataccg ccgagttcat cttcttcgcg
    11281 attgcttcgt cgttgcatag gatgagcccg ccgcgggggc cgcgaagcga cttgtgcgtg
    11341 gtggtcgtga cgacgtgtgc atgcggcacc gggctggggt ggactccgcc cgcgaccagg
    11401 ccggcgaaat gggccatgtc gaccatcagg aaagcgccga cctcgtcggc gatctcgcgg
    11461 aacgcggcga agtcccagat ccgcgaataa gcggtacccc ccgcgataat gagcttcggc
    11521 cgattttcgc gagcgattcg agccacctcg tccatgtcga gcaattggtc gtcgcggcgg
    11581 acgccgtacg ggaccgggtg aaaccacttg cccgacatgt tgaccggcga tccgtgggtc
    11641 aggtggccgc ccgcattgag gtcgagcccc atgaagctgt cgcccggctc cagcagagcc
    11701 aggaacaccg cctggttcat ctggctgccg ctgttgggct ggacgttggc gaaaccggcg
    11761 ccgaacagct ccttggcgcg gtcgatggca agctgctcga ccacgtcgac atattcgcag
    11821 ccgccgtaat agcgcttgcc gggatagcct tccgcatatt tgttggtaag gatcgatccc
    11881 tgcgcctcca gaaccgcctt cgagacgatg ttttcggacg cgatcagctc gatcttctcg
    11941 cgctggcggc caagctcatt ggcgatcgcg tccgcgatct ccggatcggc ctgcttcagg
    12001 ccgtcggtga agaagccctt gggctgaacg tcgttcaaat tggcggcgct ggccatcagt
    12061 cgctttcctg caggagctgt gagagctggt cgacccggcg ctggtgccgg ccgccggcaa
    12121 agtcggtgcc aaggaattcg gtgacgcagg cccgcgccat gtcggcgccg atcagccggc
    12181 cgccgagggc gagcacgttg gcgtcattat gctcgcgggc gaggcgtgcc gacagcggat
    12241 cgtcgaccct ggcgcagcgg caggcgggat tgcggtttac agcaatggag attccgattc
    12301 ccgagccgca gacggcgatc ccgcactcgg cctcgcctga ggcgacggag ttcgccaagc
    12361 gcgccccgaa ttcagggtaa tcgacacttt cggggccatt ggtgccaagg tcgaggacga
    12421 catgtccgcc atcgcgaagc caggccgcga gctcatcctt gagggcgaat ccggcgtggt
    12481 cggaggcgag ggcgatgcgc attcgaactt cctagcttcc accggcgcgg agcgccacaa
    12541 ctgcgaccct taaagtcact aaagtcacgc gatgcgccgc catttctgtg aacttaagcg
    12601 gagtggcgtc cctgaaacga tggatcccat attgcttggc atggtcgcag tgaaccacgg
    12661 ttcacccgct gtaggacagc aaattcggca gttcgccgaa cggatgcggc ggcgggtcgg
    12721 gtttggcggt cactagccgc tgtcaggcga agagtccgag cgggctatgc gcccgggcga
    12781 ccgtaatgat gaacgcgtag acgactccgg cgccggccaa gctcccccaa cggatcgcag
    12841 ccgatcgccc ccgaagggcc cagtaaccca gcatgatgta caggacgagg agaagcagct
    12901 tcatcgtcag ccaattgtcc acgaaggggt attggcggat gatcgttgtc agcatcaaag
    12961 cggcggtcag gaggacggtg tcgaccgtat aggacagcag cctgaccggc cacgccatca
    13021 cccatgtcgc accggcgaca ttgcgcggta ctgcccgcag gagcagtagc aagccgcttg
    13081 ccgccaccgc gccgatatga gcggcgcgga tttcgagata gaagggctcc accgcgactt
    13141 atttggctgt cgccggcttc gcgcggctac ctttcggcat cgcgccacct tcgagaacta
    13201 ccgactctcc gcggtcgtct tcgcgctgcg gccaaagcca caggcgagcc acgaaatagg
    13261 tgagggcgag ggcgccgatc gaaaagacgg tgtcgcccgg tacccgcatc catatgagca
    13321 gctcgacgat cggctgctgc atgaactcgt gggagcgggc aaaccaatag ccctgatcga
    13381 tcgccgccag cagctgaaga gtgccaagcg ggaggagcgt gaacaccgcc atcatcgcca
    13441 gtccgatgtt gaagcaccag aagctgatcc gcaggacgcg ctcgtcccat ttgaggtccg
    13501 gcctcattcc gcgaaggcag aacaggacca ggccgattcc gagcatgccg tagacgccga
    13561 acagcgcggt gtgcccgtgc aatggagtga ggttcagccc ctgcatataa tagagggata
    13621 gcggcggatt gatgaggaag ccgaaaaggc cggccccgac caggttccag aacgacacgg
    13681 acaggaagaa catgaccggc cagcggtagc gctgcatcca cggagtggcg cttgcgagcc
    13741 gccagtgatc gtaggcttcg aacccgatat aggcgagcgg caccacctcg agcgccgaga
    13801 aactcgcgcc cagcgcaagg accgctgtcg atgtcccggc gaagtacagg tgatgaagcg
    13861 tgccgaggac tccgccggcc atgaagatga tcgtcgcgaa cagcacggca acggtggcga
    13921 tcttcaccgg gatcagacca agccgcgtga acaggaacgc gatgactgcg gttgcgaaca
    13981 cctcgaagaa accttcgacc cacaggtgga ccagccacca gcgccaatat tcgacgatcg
    14041 aaatgtgggt gtgctcgttc caaagcagcg ccgcgccgta aaagaggcca atggcaaccg
    14101 ccgacaggaa gaacagggcg gtgatggagc gccactcgtt attttccttg agcgcaggcc
    14161 acagggcgcg gcccacgaga gtcagccaga tcaagaggcc gaggaacagg aaccactgcc
    14221 agaagcggcc catgtcggca tattcccaac cctggtggcc gaaccagaaa ttgttctcga
    14281 gcccgagcgt ctgcatcact gcgagccact ggccggcgaa cgagccgaca acgatgatca
    14341 gcagacagac ccacagtata ttgaccccga gtgcctggaa tttgggttcg tagccggaga
    14401 tcgccggcgc catgtaaagg ccggtgccaa gccaggctgt cgcgatccac agcaccgcaa
    14461 gttgcgtgtg ccaagtgcga gtgatggaat aaggcagaat ctcagcggcc tcgtagccgt
    14521 aaacgagctg gccctcgacc tgatagtgtg cggtcatcgc gccgaacaag atctggacca
    14581 ggaacagcgc cagcagcacc cagaaatact tggccgtcgc cctcatcgag ggcgtaatct
    14641 tgatgccccg cagcgggtcc gaccgcggca ggtcgtgctt cttttcttca gcttccctgc
    14701 gcccatgggt ggaagcgtga tgccagccga gcaacgcaat tcccgcgagc aggaaggtga
    14761 cgctgaacgc cgaccagatg aaggtcgtcg acggaggccg attgtcgacc agcggctcgc
    14821 tcggccagtt gttggtgtaa gttaccttgc tgtcgggacg ctgagtcgtt gccgcccacg
    14881 cagtccacca gaagaatgcc gagagcgccc ggcggtgttc cggatccggc acggtgccgt
    14941 ttttcatcgc ataattttcg cgaagcgtgg cggtggcggg atcgtcgccg aacaggcttt
    15001 cataatgtct ggacaccgtg cggatggcct ccgcgcgttc cgcggcgagg gtaatcgtct
    15061 tggtcgcggg atcgtaggtg ttcggccgca tgatgtcctg gagacggccc tccagctgag
    15121 ccttctgctc ggctggcagt cgcgcgtagc cgcgcccgcc gctccaaccg tcgaggatgg
    15181 cgatcgattc gcgatgcagc cagtcggccg accagtcggg agcgacatag ccgccatgac
    15241 cccagatgga gccgagctgc atgccgccca tggattgcca cacttggcgc ccgcgctcga
    15301 tgtcggcgcg ggtgtaaacc gtctcgccgc tctgcgacac gacctgctcg ggcatgggcg
    15361 gcatcttgaa actgatgtct cggccgacaa ggagcagcac accgaacgac acgacgagaa
    15421 gaaccgtcag tagagtccaa agcttgcgag tgctcgtcat tcaaagtccc cgtgtttgat
    15481 gctggtcagc cgatggcagc cggatggcgc cagtctcgaa ttcgaatgaa agggattgcc
    15541 ggactcaagc ggcgagcttc agttcgagcc ggccccatat ctcgatgagc gcgctcgtca
    15601 gctcgtccat catctcggtc gtgtggcagg ggccgggggt gaagcggagc cgctcggttc
    15661 cgcgcgggac ggtcgggaaa ttgatcggct gaacgtagag gccgtattcg gcgagcagaa
    15721 cgtcgcttat ccgcttcgcc ttgatcgggc agccgaccag aaccgggacg atgtgggtca
    15781 cgctcggcat caccggaagg ccggccgatg caaacttctt cttcagagtc gccgccgccg
    15841 cctgctgcgc ttcacgttcc gtaggcgacg tcttcaggtg gcggacgctg gcgagcgcac
    15901 cggctaccag aaccggcgac agcgaggtcg tgaagatgaa gcccggagca tagcttcgga
    15961 tgcagtcgat gatcgttcgg ctcgccgcga tatagccgcc catgactccg aacgccttgc
    16021 ccagcgtgcc ttcgataatc gtcagccggt gagcgagccc gtcacgctcg gaaattccgc
    16081 cgccgcagtc gccgtacatg ccgaccgcgt gcacttcgtc gagataggtc agtgcgccat
    16141 atttgtcggc gaggtcgcag atcgcggcaa tcggcgcgat gtccccatcc atcgaataga
    16201 cgctttcgaa cgcgatcagc ttgggagtcc cgtcctcgca ttcggaaagc agctgctcga
    16261 gatgttccag gtcgttgtgc cggaacacgc gcttctcgca gcccgagttc ttgatccccg
    16321 cgatcatcga ggcgtggttg agctcgtcgg agaagatcac gcagccgggg agcagcttgc
    16381 cgatagtcga aagcgccgcc tcgttggaca cgtagccgga ggtgaacaat agcgccccct
    16441 ccttgccgtg aagcgacgcg agctcggcct ccagttccat atggtaatgc gtgttgccgc
    16501 tgatgttgcg ggtgccgccg gagcccgctc cgacctgatg gagagccgtt tccatcgcct
    16561 cgatcacggc cgggtgctgg cccatcccga gatagtcgtt cgagcaccag acgatgaccg
    16621 gcttgggccc gttgccgccg aagcagtggg cgttggggta ggagcctttg gtgcggagga
    16681 tgtcgatgaa cacccggtag cggccctcgc cgtggagccg ttcgatcgct gacttgaaga
    16741 tgctgtcgta atccaacgct taccgtcccg ccgcgtgttc gggagccttt accgtcgcgc
    16801 agcggccatt tccacccagt aaacctactt atagtgatcg aacttctgcc agtcccgagc
    16861 ggccgttcaa atcgcgctct ggtccggaac tctcgtggtc gttcgccgat ttcccaccca
    16921 ttcatggtgg ggcgcgg
//
LOCUS       DATAKH010000011         2832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35503,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000011 DATAKH010000000
VERSION     DATAKH010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35503"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..961
                     /locus_tag="VHN55_00350"
     CDS             <1..961
                     /locus_tag="VHN55_00350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4350 domain-containing protein"
                     /protein_id="HEX2802425.1"
                     /translation="ESHREVAGMRLLQKLPQAICALGAVFFLAACHEVDFDGTVERPA
                     FRENGPVILFDEGHHNHHSLRSTYAPFAKLLKNDGFEVRKLSGPLSANDLATGRILTI
                     VTAQSDTETNDAPAFTPGEVGAILSWVRDGGSLLLVTDHYPFPNAVEPLAAALGLEVA
                     KGMTFDARHFRSGTEDDSRLIFSRENGLLARHPIIEGRNPTERVSVVETFTVDAFRPH
                     NAGIQPLLQLADTAVNRVGRPNVSRQGGDVVVTVEFGDPVPASGWVQGAAFGLGRGRV
                     VALAESAMITAQEDGGRKLGMNAPGNDNRQFLLNVIHWLARVY"
     gene            complement(975..1757)
                     /gene="purC"
                     /locus_tag="VHN55_00355"
     CDS             complement(975..1757)
                     /gene="purC"
                     /locus_tag="VHN55_00355"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEX2802426.1"
                     /translation="MARRRQIYEGKAKILYEGPEPGTLIQYFKDDATAFNAQKRGTIS
                     GKGVLNNRISEHIFTALAAIGVPTHFIRRVNMREQLIRQVEIVPIEVVIRNVAAGSLS
                     KRLGIEEGTQLPRTIIEYYYKDDALGDPLISDEHIACFGWASQEEMNDIADMAIRVND
                     FLSGMFAAIGIRLVDFKLEFGRVWDGDYARIILADEISPDGCRLWDIKSNEKLDKDRF
                     RLDLGKVAEAYQEIARRLGLMPEGEDESAVLDLDEHRKKRGR"
     gene            complement(1840..>2832)
                     /locus_tag="VHN55_00360"
     CDS             complement(1840..>2832)
                     /locus_tag="VHN55_00360"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010411802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX2802427.1"
                     /translation="ASVYLFDRTNAKLTKLYTGRPELVGAPLVPMWPVEIKSRDGLTL
                     PSYLTLPVNADANRDGKAEQPVPMVLYVHGGPWGRDTYGYHPYAQWLANRGYAVLQVN
                     FRASTGFGKDFVTAGNLQWGKTMHDDLIDSVDWAVANGVTTPDKVAIMGGSYGGYATL
                     AGLAMTPEKFACGVDIVGPSNLFTLLETIPPYWEAIKQQFYQRMGNPTTEDGRALLKA
                     ASPLTYVDAIKRPLLIGQGANDPRVNKRESDQIVAAMKAKNIPVTYVLFPDEGHGFAR
                     PANSIAFNAVAENFLQPCLGGRAEPIGDALEPSSAEVLEGAANVTGLTQSAGSK"
BASE COUNT          475 a          864 c          918 g          575 t
ORIGIN      
        1 agaaagccat cgcgaggttg cggggatgag gctgctgcaa aaattgcccc aggcgatttg
       61 cgcgctcggc gcagtcttct ttcttgccgc ctgccacgag gttgatttcg acgggacggt
      121 tgagcggccg gcgttcaggg aaaatggccc ggtcattctc ttcgacgaag gacatcacaa
      181 tcaccacagc cttcgatcga cttacgcacc gttcgcgaag ctgctgaaaa atgacggatt
      241 cgaggtccgc aagctttcgg ggccgctgtc tgcgaacgat cttgcgacgg ggcgcatcct
      301 caccatcgtc actgctcaat cggacaccga aaccaacgat gcgcccgcct tcaccccggg
      361 cgaggtaggg gcaatcctct cctgggtccg ggatggcggc tcgctactcc tggtgaccga
      421 tcattacccc ttccccaatg cggtggagcc gctcgctgcc gcgctcgggc tcgaagtcgc
      481 aaaaggcatg actttcgatg cccgtcattt ccggagcggc actgaagacg acagccgtct
      541 catcttttcg cgcgagaacg gtcttctggc ccgccacccg atcatcgagg gacgcaatcc
      601 gaccgagcgc gtttccgtcg tagagacatt cacggtcgac gctttccggc cgcacaatgc
      661 aggcatccaa ccgctgctcc agctcgccga caccgcggtc aatcgcgttg gacgcccaaa
      721 cgtcagtcgc cagggcggcg atgttgtcgt gaccgtcgaa ttcggcgatc ccgttcccgc
      781 ttccggatgg gtacagggtg cggctttcgg gcttggccgt ggccgcgttg tcgctttggc
      841 cgagtcggca atgatcactg ctcaggaaga tggcggaagg aagctcggca tgaatgcacc
      901 gggtaatgac aaccgtcagt tcctgctcaa cgtcatccac tggctggcgc gagtctattg
      961 atcgggaaag acggctatct tccccgcttc tttcggtgtt cgtccaggtc gaggaccgca
     1021 ctttcgtctt cgccctcggg catcagccca agccggcggg cgatttcctg ataggcttcg
     1081 gcgaccttgc cgaggtcgag gcggaagcgg tccttgtcga gcttctcgtt ggacttgatg
     1141 tcccacagcc ggcacccgtc ggggctgatc tcgtcggcaa ggatgatccg tgcgtaatcg
     1201 ccgtcccata cgcgcccgaa ttcgagcttg aagtcgacga ggcggattcc gatcgccgcg
     1261 aacatgccgg aaaggaagtc gttcacccgg attgccatgt cggcgatgtc gttcatctct
     1321 tcctggctgg cccagccgaa gcaggcgata tgctcgtcgg agatgagcgg gtcgccgagc
     1381 gcgtcgtcct tgtaataata ttcgatgatc gttcgcggaa gctgcgtccc ctcctcgatc
     1441 ccgaggcgct tcgacagcga gccggccgcg acgttgcgga tcacgacttc gatcgggacg
     1501 atctcgacct ggcggatcag ctgttcgcgc atgttgacgc ggcggatgaa atgggtcggg
     1561 accccgatgg ctgcgagcgc ggtgaagata tgctcggaaa ttcggttgtt gagcacgccc
     1621 ttgccgctga tcgtcccgcg cttctgcgca ttgaacgcgg tcgcgtcgtc cttgaaatat
     1681 tgaatcaagg tgccgggctc tggcccttcg tagaggatct tggccttacc ctcgtagatc
     1741 tggcggcgac gagccatatt cggtgttgcg ctccggcggg gttcgaaaga gcggcggcta
     1801 taggcgagcc gccgccccat cgcaattgcg tcgcctggcc tatttggagc cggccgattg
     1861 ggtcagcccg gtgacgttcg ccgcaccttc caggacctcc gccgaggaag gttcgagggc
     1921 gtcgccgatc ggctcggccc tgccgccaag gcacggctgg aggaagtttt ccgcgaccgc
     1981 gttgaaggcg atgctgttcg ccggccgggc aaagccgtgg ccttcgtcgg ggaacaggac
     2041 gtaggtcact gggatattct tcgccttcat cgcagcgacg atctggtccg actcgcgctt
     2101 gttgacccgc gggtcgttgg cgccttgtcc gatcagcagc ggccgcttga tggcgtcgac
     2161 gtaggtgagc ggggaggcgg ccttaagaag cgcccggccg tcttccgtcg tcggattgcc
     2221 catgcgctgg tagaattgct gcttgatcgc ctcccaatag ggcgggatcg tttcgagcag
     2281 ggtgaagagg ttggacgggc cgacgatgtc gactccgcag gcgaacttct cgggagtcat
     2341 ggccaggccg gcaagcgttg catagccgcc atagctgccg cccatgatcg cgaccttgtc
     2401 cggtgtcgtg acgccgttgg cgacggccca gtcgacgctg tcgatcaggt cgtcgtgcat
     2461 ggtcttgccc cactgcaggt tgcccgcggt gacgaagtcc ttcccaaatc cggtcgaggc
     2521 gcggaagttg acctggagga ccgcatagcc gcggttcgcg agccattgcg cataagggtg
     2581 ataaccgtag gtgtcgcggc cccacggtcc gccgtggacg tagagcacca tgggcaccgg
     2641 ctgctcggcc ttgccatccc ggttggcgtc ggcgttcacc ggaagggtga ggtagctggg
     2701 cagtgtcagt ccgtcgcggg acttgatttc gaccggccac atcgggacga gcggcgcccc
     2761 gacgagctcg ggccggccgg tatacaattt ggtcagcttc gcattggtgc ggtcgaagag
     2821 gtagaccgag gc
//
LOCUS       DATAKH010000012         5724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_15895,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000012 DATAKH010000000
VERSION     DATAKH010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5724
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15895"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1426)
                     /locus_tag="VHN55_00365"
     CDS             complement(<1..1426)
                     /locus_tag="VHN55_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEX2802428.1"
                     /translation="MNAPTAALVAPRPERLRLVGQRRQTLSTMHQRLMLAMLVFAGVI
                     GLISVRIVYLAAFGDHAGSRPGVAALVPDRGDIVDRDGQPLARTIDAWSIGLHPGKVI
                     GDKAQLARKLATLMPERSEGDYLSMLQSGKTFFYLRRRASPDVVEAVNALGEPGIALD
                     REPERLYPQTSLAAHVIGFTNLDGHGASGAELAFDERLSDPATRGEPVQLSISMTVQQ
                     ALEHELLEAKTHFSAIGAAGIIMDVHTGEILAMTSLPAMNPNAPGKVTPDQMFNRATL
                     GVYELGSTFKPFTLAMAMDSGVVNSPGQTYNCPKVLPAYGHLVHDTHPFGRTCTVAEI
                     MMESSNIGMAQMAEQVGTARQKAFLKRMGFLDRLEVELPERGRTLTPGSRWGPFETMT
                     VGFGHGIAVAPLQLAMGYATLFNGGIYRPPTILKVGAGNPLPKGRRVFTADTSYRMRS
                     LLRLVVTEGTGKKANAPGYRVGGKT"
     gene            complement(1423..2109)
                     /locus_tag="VHN55_00370"
     CDS             complement(1423..2109)
                     /locus_tag="VHN55_00370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802429.1"
                     /translation="MSVRSFHSVFMATAVAGAALGCYLVSLRVASERAALQEVESQIF
                     AAQSDIRLLQTEIGTRARLSQLERWNARALALSAPSAGQILADKFQLARLVAPQRKLD
                     IEAPVVLASAPAPQPAPQLGTDSDSDPAPVATLLHEASYQVPDRKPVSALRETPPKPA
                     ASKAVKPATSDEVASAAKPTVSKKPAAAQKSASTPPAAAKKPVRTASVDPLAPLPAGQ
                     STTEASRTNR"
     gene            complement(2106..3056)
                     /gene="rsmH"
                     /locus_tag="VHN55_00375"
     CDS             complement(2106..3056)
                     /gene="rsmH"
                     /locus_tag="VHN55_00375"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016747709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEX2802430.1"
                     /translation="MTARADHTPVLVDEVIDALALQPGDTAVDGTFGAGGYTRAMLAV
                     GVGRVIGFDRDPDAIAEGRSLVPDPRLTLVQERFSQMDRVLAERGIGPVDAIALDIGV
                     SSMQIDRPERGFAFSADGPLDMRMDQSGPTAAEFLNQADEAEIARVLREYGEEPRART
                     IARAIVAARPIDRTGELAAIVRRALGYRTGQKSDPATRTFQAIRIHLNAELDELEDGL
                     VAAERALRPGGRLAVVTFHSLEDRIVKRFFRERSGATPAGSRHRPVLADPNEPTFERV
                     AKPVSPSERELAGNPRSRSARLRSAVRTPAPSRLTTGERK"
     gene            complement(3053..3544)
                     /locus_tag="VHN55_00380"
     CDS             complement(3053..3544)
                     /locus_tag="VHN55_00380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEX2802431.1"
                     /translation="MALEHLFQGSALNSVDAKGRVSVPAFLRSVIERRGDARMITLAK
                     HEAFPCLSAYDPAYAALKHSKLERLLEKEETNPDSQLDYEQRNLMAFAATEEVPYDSS
                     GRIVLPPMMRRKGDIADFALFLGAGETFQIWNPKLLLAEPRIPDDMKDIARFRLEERG
                     LKL"
     gene            complement(3820..4557)
                     /locus_tag="VHN55_00385"
     CDS             complement(3820..4557)
                     /locus_tag="VHN55_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802432.1"
                     /translation="MTGYRSRRRWVAAALGALLMAIAVTAGIAFRSHSSGYAPRPPGE
                     RPALLLLTSLPIVFPEEFTLEGVGSPALTVLQSRYRVIPISVADRQSLDQHRLLLMAQ
                     PRAQPAEVLVELDQWVRSGGRVLLLADPALQWPSQRPLGDALRPPLAYADTGLLGHWG
                     LRLDSSDDLGSTVIEAAGHRISTAAPGELVASGRECTVDEARLIARCRIGLGTATVIA
                     DADFLDSERLGAANLELLLAELDRLER"
     gene            complement(4554..4799)
                     /locus_tag="VHN55_00390"
     CDS             complement(4554..4799)
                     /locus_tag="VHN55_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802433.1"
                     /translation="MPHRAGTTAQRVRIGLTGLAFAFLLVLLGSIVSRSGQDDRSSAI
                     ENSTTNSPKEPLAELGVAPGSETQEERAAENRARGSQ"
     gene            4881..5228
                     /locus_tag="VHN55_00395"
     CDS             4881..5228
                     /locus_tag="VHN55_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802434.1"
                     /translation="MTRTPLLLALLATAALAGCDNGNDGTIVAGPDADVANQAPATDK
                     PVTLPPSIAASKIYRCKDNSVVYVDWLSDGSARVRTERTDVGTPVQVGEGMPLSGSPD
                     AATVTYNGQSCKA"
     gene            5311..>5724
                     /locus_tag="VHN55_00400"
     CDS             5311..>5724
                     /locus_tag="VHN55_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008602748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HEX2802435.1"
                     /translation="MEVAEAPAVTPEIVAEHGLNDEEYSRILKALGREPNLLELGIFS
                     VMWSEHCSYKSSRVHLKTLPTEAPWVIQGPGENAGVIDIGDGDAAIFKMESHNHPSYI
                     EPYQGAATGVGGILRDVFTMGARPVANLNALRFGSP"
BASE COUNT          931 a         1868 c         1943 g          982 t
ORIGIN      
        1 cggtcttgcc gcccacccgg tagcccggcg cgttcgcctt cttgccggtt ccttccgtca
       61 ccaccagccg cagcagcgag cgcatccggt aactcgtgtc agccgtgaac acgcgcctgc
      121 ccttcggcag cggattgccc gcgccgacct tcaggatcgt cggcggacga tatattccgc
      181 cgttgaacaa ggtcgcatat cccattgcca gctgcagcgg ggcgacagcg atgccatggc
      241 cgaagccgac ggtcatcgtc tcgaaggggc cccagcggga gccgggggtg agggttcggc
      301 cccgctcggg aagctcgacc tccagcctgt cgaggaagcc catacgcttg aggaacgcct
      361 tctgcctcgc agtcccgacc tgctccgcca tttgcgccat tccgatgttg gagctctcca
      421 tcatgatctc ggcgaccgtg caggtgcggc cgaacggatg cgtgtcgtgg acgaggtggc
      481 cgtaggcggg aaggaccttg gggcaattgt aggtctgtcc gggcgagttc accacgccgg
      541 aatccatcgc catcgccagc gtgaacggct tgaatgtcga gccgagctcg taaacgccga
      601 gcgtcgcccg gttgaacatc tggtcgggag tcaccttgcc gggagcgttg gggttcatcg
      661 ccggaaggga cgtcatcgca aggatctcgc cggtgtggac gtccatgatg attccggccg
      721 ctccgatcgc cgagaaatgg gtcttcgcct cgagaagctc gtgctcgagc gcctgctgaa
      781 ccgtcatcga aatcgacagc tgcaccggtt cgccgcgcgt tgccgggtcc gacagtcgct
      841 cgtcgaaagc gagctcggcg ccggatgctc cgtggccgtc gagattggtg aagccgatca
      901 cgtgcgcggc gaggctggtt tgcgggtaca accgctccgg ctcgcggtcg agcgcgattc
      961 cgggctcgcc gagcgcgttg accgcctcga cgacgtcggg cgaggcgcgg cggcgaaggt
     1021 agaagaatgt ctttcccgat tggagcatcg acagataatc gccttcgctt cgctccggca
     1081 tcagtgtcgc gagcttgcgc gcgagctgcg ccttgtcgcc gatcaccttt ccgggatgga
     1141 ggccgatgct ccacgcgtcg atagtccggg cgagcggttg cccgtcgcgg tcgacgatgt
     1201 cgccgcgatc cgggacgagc gccgcgactc cgggacggct tccggcgtgg tcgccgaacg
     1261 ccgccaggta gacgatccgg acggagataa ggccgatcac cccggcaaag acgagcatcg
     1321 ccagcatcag ccgctggtgc atggtcgaca gcgtctggcg acgctggccg acaagccgaa
     1381 gccgctcggg gcgcggggcg acgagggctg cggtcggggc gttcatctgt tcgtgcgcga
     1441 tgcctcggtc gtggactgac cggccggaag cggcgccagc gggtcgacgc ttgcggttcg
     1501 taccggcttc ttcgccgcgg ccggcggagt ggaagcgctc ttctgggccg cggccggctt
     1561 cttcgacacc gtaggcttcg cagcggaagc gacttcatcg ctcgtggccg gcttcaccgc
     1621 tttggaagcg gcaggcttgg gcggcgtttc ccgtagggcg gaaaccggct tccgatccgg
     1681 cacctgatag ctggcttcat gaaggagcgt cgcgaccgga gcgggatccg agtccgaatc
     1741 ggtgccaagc tgcggcgccg gctgcggcgc cggtgcggat gccaggacca ccggcgcttc
     1801 gatgtcgagc ttgcgctgcg gcgcaaccag cctcgccagc tggaacttgt cggcgaggat
     1861 ctggccggcg ctcggcgccg aaagtgcgag agcgcgggcg ttccaccgtt cgagctggct
     1921 gagcctggcg cgggtgccaa tttccgtctg aagcagtcgg atgtcggact gggcagcgaa
     1981 gatctggctt tcgacttcct gaagcgccgc gcgctcggat gccacccgaa gggaaacgag
     2041 gtagcacccg agtgcggctc cagccacggc cgtcgccatg aacaccgaat ggaagctgcg
     2101 gacactcatt tgcgctctcc tgtcgtcaag cggctcgggg ccggcgttcg gaccgcgctt
     2161 ctcagccgcg ccgaacgcga gcgagggttg ccggccagtt cgcgctccga cggggaaacc
     2221 ggctttgcga cccgctcgaa cgtgggctcg ttcgggtcgg ctaggacggg tcggtggcgc
     2281 gaaccggccg gggttgctcc gcttcgttcg cggaagaagc gtttgacgat ccggtcttcg
     2341 agggaatgga aggtgacgac cgcgagccgc ccaccgggac ggagcgcccg ttcggccgcc
     2401 accaaaccgt cttcgagctc gtcgagctcg gcattgaggt gaattcgaat cgcctggaac
     2461 gtacgggtcg cggggtcgct cttctggccg gtgcgatatc ccagtgcgcg gcggacgata
     2521 gctgcaagtt cgccggtccg gtcgatcggc cgggcggcga cgatcgcccg ggcgatggtc
     2581 cgcgcgcggg gctcctcgcc gtattcgcga agcacgcggg cgatttctgc ttcgtcggct
     2641 tggttgagga actccgccgc ggtcggcccg ctttggtcca ttcgcatgtc gagcggcccg
     2701 tcggccgaga aggcaaagcc ccgctccggc cggtcgatct gcatcgagct gaccccgata
     2761 tccagagcga tagcgtcgac gggtccgatc ccgcgctcgg cgaggacccg gtccatctgg
     2821 ctgaagcgct cctggacgag cgtgaggcgc gggtcaggga cgagtgaccg gccttccgcg
     2881 atcgcatccg gatcgcggtc gaaaccgatc acccgtccca cccccaccgc gagcattgcg
     2941 cgggtgtagc cacccgcacc aaaggtgccg tcgacagcag tgtcgccggg ctggagggcg
     3001 agcgcgtcga tgacttcgtc gacgagcact ggcgtatggt cggcgcgggc ggtcaaagct
     3061 tgagcccccg ctcctcaagc cggaaccggg cgatatcctt catgtcgtcg ggaatgcgcg
     3121 gttccgccag cagcagcttc gggttccaga tctggaaggt ctcgccggcg ccgaggaaca
     3181 gcgcgaaatc agcaatgtcg ccttttcggc gcatcatggg cgggaggacg atccggccgg
     3241 aactgtcgta gggaacctct tcggtggcgg cgaaggccat caggttgcgc tgttcgtagt
     3301 cgagctgcga gtcggggttg gtctcttcct tctcgagaag ccgttcgagc ttgctgtgct
     3361 tgagcgccgc gtaggcggga tcgtaggcgc tgaggcaggg aaaggcttcg tgctttgcga
     3421 gcgtgatcat gcgggcgtca ccgcgccgtt cgatgaccga gcgcaggaag gccggcacgg
     3481 agacgcgtcc cttcgcgtcc accgagttga gagcgctgcc ctgaaacaga tgctctaacg
     3541 ccacgtctac tccccgttcg cgtagcgcac agcttccccg ttcgcgggtg agcggtatcg
     3601 ccgccggtcc cgcgccggat tccaagagtg agggttttgc cccgcgctac agccggtgtt
     3661 ggtaactcag catctgacgg gatacaatgg gtttcgatgc cattttgagg gatttcatgc
     3721 cgctaggcgg tttttcgcga cttttttgcc tcagtttcgc ggtctgttct cgtcctgttc
     3781 tatgttactt gggctgtgga taagtttgtg ggcggcgaat cacctctcga gccggtccag
     3841 ctcggcaaga agaagctcca ggttggccgc tcccagccgt tccgagtcga gaaaatcagc
     3901 gtcggcgatg acggtggcgg tgccgagccc gatgcggcat ctcgcgatca gccgcgcctc
     3961 gtcgacggtg cactcgcggc cggacgctac gagctcgccg ggcgcggcgg tgctgatccg
     4021 gtggccggca gcctcgatca ccgtcgaccc caggtcgtcg gaagaatcta accgcagccc
     4081 ccaatgcccg agcagtcctg tgtccgcata ggcaaggggt ggcctcaggg catcgccgag
     4141 cggccgctgg ctgggccatt gcagcgccgg gtcggcgagc agcagcaccc ggccgccgct
     4201 tcgaacccat tggtcgagct cgaccagcac ctcggccggt tgcgcccgcg gctgggccat
     4261 cagcaggagc cgatgctgat cgagcgactg ccggtccgcg acgctgatcg gaatcactcg
     4321 gtaacggctt tggagaacgg tcaacgccgg cgagccgacg ccttcgagcg tgaactcctc
     4381 gggaaacacg atcggcaggc tagtgagcag aagcaaggcg gggcgctcgc cgggcgggcg
     4441 cggagcgtag ccgctcgaat ggctgcggaa cgcgatcccc gccgtaacgg caatggccat
     4501 gagcaatgcg cccagtgcgg cggcgaccca gcgccgccgg gagcgatacc cggtcactga
     4561 ctcccgcgag ccctgttctc cgccgcccgc tcttcctgcg tctcggagcc cggagcgacg
     4621 ccgagttcgg cgagcggctc cttcggcgag ttcgtcgtcg aattttcgat cgccgaggag
     4681 cgatcgtcct ggccggagcg gctgacaatg ctgcccagca ggacgagaag gaaggcaaac
     4741 gcaaggccgg tcagcccgat acgcacccgc tgcgcagtcg ttccggctcg gtgaggcacg
     4801 aggggaagct atggctggct ttgccaagat gcaagttcca cacttgacga acggccgtag
     4861 cgctgcgcaa tcgcgccgcc atgactcgca ccccgcttct gctcgccctc ctcgcaaccg
     4921 ccgcgctagc cggttgcgac aatggcaatg acggcaccat cgtcgccggc cccgacgccg
     4981 atgtcgccaa ccaggctccg gccaccgaca agccggtgac actcccaccg tcgattgcgg
     5041 ccagcaagat ctaccgctgc aaggacaata gcgtcgttta cgtcgattgg cttagcgatg
     5101 gcagcgcacg cgtccggact gaacggaccg acgtcggaac gcccgtccag gtcggcgagg
     5161 gcatgccctt gtccggcagc ccggacgccg cgaccgtcac ctacaacggc cagtcctgca
     5221 aggcctgagc gccccaacaa gatcgaattg agaaccccgg cttcacggcc ggggtttttt
     5281 tgtgcccctg ccccagctat cggcgcggcc atggaagtcg ccgaagcccc agcagtcacc
     5341 cccgaaatcg tcgccgagca cgggctcaac gacgaagaat atagccgaat ccttaaggcg
     5401 ctcggccgcg agccgaacct tctcgagctc ggaatcttct cggtcatgtg gtccgagcat
     5461 tgctcgtaca agagctcgcg cgttcacctg aagacgctcc cgaccgaggc gccgtgggtg
     5521 atccaggggc cgggcgagaa cgccggagtg atcgacatcg gcgacggcga cgcggcgatc
     5581 ttcaagatgg agagccacaa ccatccgtca tacatcgagc cctaccaagg cgcggcgacg
     5641 ggcgtcggcg gaatccttcg cgatgtcttc accatgggcg cgcggcccgt tgccaacctc
     5701 aatgcgctcc gattcggctc gccc
//
LOCUS       DATAKH010000013         4199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_23929,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000013 DATAKH010000000
VERSION     DATAKH010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4199
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23929"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..549
                     /locus_tag="VHN55_00405"
     CDS             <1..549
                     /locus_tag="VHN55_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013041340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HEX2802436.1"
                     /translation="NNYLLGQEPAPFDLLHWNSDVTNLPAGWHRDYLATLYKANRLVE
                     KGGVSVAGVPIDLSTIDLPAYIQAGREDHIAPPQSVWKIMDHIGGAKRFVLAGSGHIA
                     GVVNPPAAQKYCHWVNDEPCGTLEDFIAGATEHKGSWWPDWLEWLKAQAPKSVKTEGA
                     RIPGKGKLKAIEDAPGRYVKER"
     gene            complement(550..1146)
                     /locus_tag="VHN55_00410"
     CDS             complement(550..1146)
                     /locus_tag="VHN55_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEX2802437.1"
                     /translation="MSQEPRIDAYIARAQPFARPILEHVRKRVHAAAPDAEEAMKWGA
                     PAYTLGGKILLITAAFKKHAAVNFWRGQELCGKEAAADAMGQFGKLTSVDDLPADKEL
                     DRLIREAAELAKTAPAPRKVKHAAKPAPNMHPEFSAALAKAPKARATLDGFSPSAQRD
                     YLEWISEAKQDATRQKRIATAVEWLSEGKKRHWKYEKC"
     gene            complement(1143..1364)
                     /locus_tag="VHN55_00415"
     CDS             complement(1143..1364)
                     /locus_tag="VHN55_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802438.1"
                     /translation="MLNLVSLIIGFVALVFAAIAFLPLLGLANWLVVPLAIFGAAIGA
                     MGRGTAGRNLNILVIVIGVFRLMLGGGIF"
     gene            complement(1400..1813)
                     /locus_tag="VHN55_00420"
     CDS             complement(1400..1813)
                     /locus_tag="VHN55_00420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802439.1"
                     /translation="MTCKLASFIPAILLASCATAPAPAPGMACGITGASDWSAWVNAM
                     PGPNARPALIATGKVTVPSGGWTFAWRDLRVMESYPVQVVAELEAIPPAGGASQAFVS
                     HDIRGEWPVDPPVGAFTVRCGDMVLARVSPVETAH"
     gene            complement(1852..2772)
                     /gene="rarD"
                     /locus_tag="VHN55_00425"
     CDS             complement(1852..2772)
                     /gene="rarD"
                     /locus_tag="VHN55_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014074931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HEX2802440.1"
                     /translation="MNPRAQVTDKNARHGLWFGVAAYGLWGILPIYFKALADVGAIEI
                     VAHRVLWSVPFLGLLLFAMGGGAELRRVIRQPRTLAILAVTAALIAANWLLYVYAVTS
                     GRILAGSLGYYLNPLVNVLLGRAVLKERLSWLQWLAVAVAAAGISGLALQAIGQLWIS
                     LALAASFATYGLLRKIAPVEAVAGLAVETTILLPLALLWLGFVIMSGGPAFGPSDQDM
                     VLLLLAGIATTVPLILFTAAARRLRYSTLGMLQFIAPTLQFLCAVFLYGERFTAAHAI
                     AFGSIWLALALYVAAIVRTPKAPASAMAPE"
     gene            2902..3546
                     /locus_tag="VHN55_00430"
     CDS             2902..3546
                     /locus_tag="VHN55_00430"
                     /inference="COORDINATES: protein motif:HMM:NF027558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4893 domain-containing protein"
                     /protein_id="HEX2802441.1"
                     /translation="MAAVAVVAGCDAINNRPRSGASVIVEEPSAGDAWKQLANVSDQS
                     RINRLGLAWQQALMEAKPKFGKAIAAEGALLEPRSALPRPQPTPGSYNCRMIRLGKDK
                     PKSPVFEKFQPFFCYVLSDDEGGLTIVKQTGSQRPAGQLMDDDFPDRMIFLGSLALGN
                     QQEPLAYSEDPERDMAGVFERIAPFKWRLVIPWPRSGAKLEVFELTPVAKQPEG"
     gene            3543..3914
                     /locus_tag="VHN55_00435"
     CDS             3543..3914
                     /locus_tag="VHN55_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX2802442.1"
                     /translation="MSQAGLLADPAEVRRLLIASASAGEPITYSELLNALGHRFTRPK
                     MRALCKVLSVVDDDAAERGEPELAVLVVRQSDGLPGQGWWVGGAILHGHDGLWTGPEA
                     MKLVRRLQRQAFEHWSGKAAG"
     gene            3947..>4199
                     /locus_tag="VHN55_00440"
     CDS             3947..>4199
                     /locus_tag="VHN55_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEX2802443.1"
                     /translation="MADARTFTVSEDDDGIRLDRWFKRNQPDISFNMVSRWARTGQLR
                     VDGKRVTPGDRIAAGEEIRVPPVEPEAPRRGRARPKREPL"
BASE COUNT          809 a         1334 c         1380 g          676 t
ORIGIN      
        1 aacaattatc tgcttgggca agagccggcg ccgtttgacc tgctgcactg gaacagcgac
       61 gtcaccaacc tgccggcggg ctggcaccga gactatcttg caaccctcta caaggccaac
      121 cggctggtcg aaaaaggcgg ggtcagtgtc gctggcgtgc ccatagattt atcgacgatt
      181 gacctgcccg cctacatcca ggctgggcgc gaggaccata tcgccccgcc gcaaagcgtc
      241 tggaagatca tggaccacat cggcggcgcc aagcgcttcg tgctggccgg ctccggccat
      301 atcgccggcg tggtcaatcc tccggccgcg cagaaatatt gccactgggt caatgacgag
      361 ccgtgcggaa cgctggagga tttcatcgcc ggcgccaccg agcacaaggg gagctggtgg
      421 ccggactggc tggagtggtt gaaggcgcag gcgccgaagt ccgtgaagac ggaaggtgcg
      481 cgaatcccag ggaagggcaa gctcaaggcg atcgaggacg ctcccgggcg gtacgtcaag
      541 gagcgctagt cagcacttct catatttcca gtgccgcttc ttgccctcgc tgagccactc
      601 caccgcagtg gcgatccgct tttggcgagt cgcgtcctgt ttcgcctcgg agatccactc
      661 gagataatcc cgctgcgcag agggcgagaa gccgtcgagc gtcgcccttg ccttcggtgc
      721 cttcgccagc gctgccgaaa attccgggtg catgttcggt gcgggtttgg cggcatgctt
      781 caccttgcgc ggcgccggag cggtcttcgc gagctcggcg gcctcgcgga tcagccgatc
      841 aagctccttg tcagcgggca aatcgtccac cgacgtgagc ttgccgaact ggcccattgc
      901 atccgccgct gcctccttcc cgcaaagctc ctgcccacgc cagaagttga ccgcggcatg
      961 cttcttgaac gcggcagtga tcagcaggat cttgccgccg agcgtgtaag ccggggcacc
     1021 ccacttcatt gcttcttcgg cgtccggggc ggcagcatga acgcgcttgc gtacgtgctc
     1081 caatataggc ctcgcgaatg gctgggcacg tgcgatgtat gcgtcgattc gcggctcttg
     1141 gctcaaaaga ttcctccccc aagcatcagc cggaagaccc cgatgacgat caccaggata
     1201 ttgaggttac gccccgctgt gccgcgcccc atcgcgccga ttgccgcccc gaaaattgcc
     1261 agcggcacga ccagccagtt ggccaagccg agcagaggca ggaaggcgat tgccgcaaag
     1321 acgagcgcca cgaatccgat aatcagtgaa acgaggttca gcatgcttgc cctctctttt
     1381 gagagtgccc gcttagcagt tagtgcgcag tttccacagg gctgacgcgc gccaggacca
     1441 tgtcgccgca gcggacggtg aaggcgccga ccgggggatc gaccggccac tcgcctcgga
     1501 tgtcatggga gacgaacgcc tggctggcgc cgccagcagg cggaatggct tcgagctcgg
     1561 cgacgacctg aaccggatag ctttccatga cccgcaggtc gcgccaggca aaggtccatc
     1621 cgccggacgg aacggtgacc ttgccggtcg cgatcagagc cgggcgggcg ttgggccccg
     1681 gcattgcgtt cacccaggcg ctccagtcac tcgcgccggt aatgccgcag gccattccgg
     1741 gcgctggcgc cggtgcggtc gcgcacgagg cgagcagaat cgcgggtatg aatgaggcga
     1801 gcttgcaggt catctcacga acgaatgcgg caatggctcg ccagttccgc tctattccgg
     1861 cgccatggcc gaagccggcg ctttcggagt ccggacaatc gcggccacat aaagggcgag
     1921 cgcgagccag atcgaaccga aggcgatcgc gtgcgcagca gtgaatcgct ccccatagag
     1981 aaaaaccgcg cacaggaatt gcagggtcgg agcgatgaac tggagcattc ccaacgtcga
     2041 atagcggagc cggcgagcgg ccgcggtgaa caggatgagc ggaaccgtcg tcgcgattcc
     2101 ggcgaggagc aggaggacca tgtcctggtc gctgggcccg aatgccggcc cgccgctcat
     2161 gatcacgaag cccagccaca gcagcgccaa tggcaacagg atcgtcgtct cgaccgcaag
     2221 cccggcaacg gcttccacgg gagcgatctt gcggagcaat ccgtaggtgg caaaactcgc
     2281 cgcgagggcg aggctgatcc acaattgccc gatcgcctgc aaggcgagcc cagagattcc
     2341 ggcggccgca accgctacgg caagccactg cagccagcta agccgctcct tcagcacggc
     2401 gcgcccgaga agcacgttga ccagcgggtt gagatagtag ccgaggcttc cggcgagaat
     2461 tcggccgctc gtgacggcat agacgtagag aagccagttg gcggcgatca gcgcggcggt
     2521 aacggccagg attgccagag tgcgaggctg gcggatcacc cggcggagct cggccccgcc
     2581 gcccattgca aacagcagaa gcccgaggaa cggcaccgac cacaggactc gatgggcgac
     2641 gatctcgatc gcgcctacat ccgcgagcgc cttgaagtag atcggcagga ttccccatag
     2701 accgtaggcc gcgactccga accacaagcc gtgccgtgcg tttttgtcgg tgacctgcgc
     2761 ccggggattc atcagccggg cgcgtaaccg gggacaacgg caagtgaaag gccttggtca
     2821 agttcgcctt ggttgcatcg gaaccgccgg actgcgagag tcgcggccat gcggatgagg
     2881 cttgccacgt cgcttgggat tatggctgcc gttgcagtcg tcgctggctg cgacgcgatc
     2941 aacaatcgcc cgcgaagcgg agccagcgtc atcgtcgagg agccgtcagc cggcgacgcc
     3001 tggaagcaat tggcaaatgt cagcgaccag agccggataa atcgcctcgg gctggcgtgg
     3061 caacaggccc tgatggaggc gaagccgaag ttcggcaaag ccatagccgc cgagggcgcg
     3121 ttgctggagc cgcgatcggc gcttccccgc ccgcagccca ccccgggaag ctacaattgc
     3181 cgaatgatca ggctgggcaa ggacaagccc aagtctccgg tcttcgaaaa attccagcca
     3241 ttcttctgct atgtcctcag cgacgacgag ggcggcctta cgatcgtcaa gcagaccggc
     3301 agccagcgcc ccgcgggcca gctaatggac gacgatttcc ccgatcgaat gatcttcctt
     3361 ggaagtcttg ccttgggcaa ccagcaggag ccgctggctt atagcgagga tcccgaacgc
     3421 gacatggccg gcgtgttcga gaggatcgca ccgttcaagt ggcggctggt gatcccgtgg
     3481 ccgcgaagcg gtgccaaact cgaggtgttc gagctgaccc cggtggcgaa acagccggag
     3541 ggatgagcca ggccggtttg cttgccgatc ccgccgaggt caggcggctg ctcatcgcct
     3601 ccgcctccgc cggcgagcca atcacctatt cggaactgct caacgcgctc ggacaccgct
     3661 tcacccgacc gaagatgcgg gccttgtgca aggtcctatc cgtcgtcgac gatgacgctg
     3721 cggagcgagg cgagcccgag ctggcggtgc tcgtcgtccg ccagtcggac ggactgccgg
     3781 ggcagggctg gtgggtgggt ggagcgatcc tccatggcca tgacggcctg tggaccggcc
     3841 ccgaggctat gaagctcgtt cggcggctcc aacggcaggc cttcgaacat tggtcgggca
     3901 aggcggcggg ttagctttcg ccgcttcagt cgctaagggg gcggccatgg cggacgcccg
     3961 gacattcacg gtcagcgaag atgacgatgg cattcgcctc gatcgctggt tcaagcgcaa
     4021 ccagcccgac atcagcttca acatggtgtc tcgctgggca cgcaccggtc agttgcgggt
     4081 cgacggaaag cgggtaacgc cgggcgaccg gatcgcggcc ggcgaggaaa ttcgggttcc
     4141 gccggtcgag ccggaagcac cacgccgcgg tcgcgccaga ccaaagcggg agcccctca
//
LOCUS       DATAKH010000014         1544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35518,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000014 DATAKH010000000
VERSION     DATAKH010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35518"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VHN55_00445"
     CDS             complement(<1..245)
                     /locus_tag="VHN55_00445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802444.1"
                     /translation="MTDKHQHPLNVSGEPRAFFGRRSGKRLHKGQDALYRDVLPRLTI
                     PLPETTLDPGTLFPEAARIEIEIGYGGGEHLSRIASE"
     gene            complement(324..>1544)
                     /gene="metK"
                     /locus_tag="VHN55_00450"
     CDS             complement(324..>1544)
                     /gene="metK"
                     /locus_tag="VHN55_00450"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010185575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEX2802445.1"
                     /translation="EGHPDKVCDRISDEIVDLVFKEAKKTGMDPSQVRIACETLATTN
                     RVVIAGEVRVPESLLKKDKQGNILKDASGAPIVNPAKFKSTARKAIRAIGYEQDGFHW
                     KKCRIDVLLHGQSADIAQGVDEKGNKDVGAGDQGIMFGYASRETPELLPAPIYYAHKI
                     LEILTEARKSGVGAAVKLGPDAKSQVTVKYENGVPVGVTQIVVSTQHVDASLTSEDVR
                     KIIEPYVRQALPEGWIGKDTVWHVNPTGKFVVGGPDGDAGLTGRKIIVDTYGGAAPHG
                     GGAFSGKDPTKVDRSAAYAARYLAKNVVAAGLADRATIQLSYAIGVAKPLSVYVDLHG
                     TGKVEESKLEAILSEVFDLSPRGIRNKLELNKPIYAKTSAYGHFGRKPGRDGSFSWEK
                     TDLVPALKAAVKAA"
BASE COUNT          245 a          472 c          517 g          310 t
ORIGIN      
        1 ctctctgacg cgatgcgcga caggtgctcg ccgccgccat agccgatctc gatctcgata
       61 cgcgcggctt cggggaaaag cgtccccggg tcgagcgtcg tttcgggcaa cgggatcgtg
      121 aggcgtggca gcacatcgcg atagagcgca tcctgcccct tatgcagccg cttgcccgag
      181 cggcggccaa agaaggctcg cggctcgccg ctgacattga gggggtgctg atgcttgtcg
      241 gtcattggtg cggtgactag cacgtcctca aatggaaatc cccgctctcg cggggatcgc
      301 cgtgatcaat aatgggcgcc ggctcaggcg gctttgacgg ccgccttcag tgccgggacc
      361 aaatcggttt tctcccacga gaagctgccg tcgcggccgg gcttgcggcc gaaatggccg
      421 taggccgagg tcttggcgta gatcggcttg ttgagctcga gcttgttgcg gataccgcgc
      481 ggcgacaggt cgaacacctc gctcaggatg gcttcgagct tgctttcctc gaccttaccg
      541 gtgccgtgca gatcgacata gaccgagagc ggcttcgcaa cgccgatggc atagctcagc
      601 tggatcgtgg cgcggtcggc gagaccggct gcaacgacgt tcttggcgag gtagcgcgcg
      661 gcataagcag ccgaacgatc gaccttggtg ggatccttgc ccgagaaggc accaccgcca
      721 tgcggggcgg cgccaccata agtatcgacg atgatcttgc ggccggtcag gccggcatcg
      781 ccatcgggtc cgccgacgac gaacttgccg gtggggttga cgtgccagac ggtgtccttg
      841 ccgatccagc cttcgggcag cgcctggcgt acgtagggct cgatgatctt gcgcacatct
      901 tcggacgtca gcgacgcatc gacgtgctgc gtcgagacga cgatctgcgt cacgccgact
      961 ggaacaccgt tctcgtactt caccgtgacc tggctcttgg cgtcggggcc gagtttgacg
     1021 gctgcgccca cacccgactt gcgggcttcg gtcaggattt cgaggatctt gtgcgcgtaa
     1081 tagatcgggg cgggcaacaa ctcgggggtc tcacggctcg catagccgaa catgatgccc
     1141 tggtcgcccg cacccacgtc cttgttgccc ttctcgtcga caccctgggc gatgtcggcg
     1201 gactggccgt gcaggagcac gtcgatgcgg cacttcttcc agtggaagcc gtcctgctcg
     1261 tagccgatgg cgcggatggc cttgcgcgcg gtggatttga acttcgccgg gttgacgatg
     1321 ggcgcgcccg aagcgtcctt gaggatgttg ccctgcttgt ccttcttgag cagcgattcg
     1381 ggtacgcgga cttcgccggc gatgacgacg cggttggtgg tggccagcgt ctcgcaggcg
     1441 atgcggacct gactggggtc catgccggtc ttcttggctt ccttgaagac gaggtcgacg
     1501 atttcgtccg aaatccggtc gcagaccttg tcaggatgac cctc
//
LOCUS       DATAKH010000015         4653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_406,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000015 DATAKH010000000
VERSION     DATAKH010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4653
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..996)
                     /gene="trmFO"
                     /locus_tag="VHN55_00455"
     CDS             complement(<1..996)
                     /gene="trmFO"
                     /locus_tag="VHN55_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HEX2802446.1"
                     /translation="MNAEVQIIGGGLAGSEAAWQLARAGVRVRISEMRGGGDTTPAHE
                     TDWLAEMVCSNSFRSDDAEHNAVGLLHQEMRDLDSLIMSAADRHRVPAGSALAVDREA
                     FAAEVTRTLENHDRIEIVRERVDSLPDGPAIVATGPLTGSALAESITAETGQGALAFF
                     DAIAPIVHRDSVDMEVAWMAARWDKGGKDYINCPLDKPQYEAFVRALIDGEKMPFKDW
                     EKDTPYFEGCMPIEVMAERGAETLRHGPMKPVGLDNPRTGRWPYAVVQLRQDNALGTL
                     WNMVGFQTKLKHGEQVRIFRMIPGLENAEFARLGGIHRNSFINSPALLDRALRLKS"
     gene            1113..2126
                     /locus_tag="VHN55_00460"
     CDS             1113..2126
                     /locus_tag="VHN55_00460"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017665315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX2802447.1"
                     /translation="MQRVLITGTAGFIGYHLAELLLDQGCTVHGYDGMTDYYDVNLKR
                     RRHQRLLQKPNFAATEGMLEDFETLRRVTMEFHPDVIVHLAAQAGVRYSLEEPRAYVD
                     ANIVGTFNILEVARELAPQHLLMASTSSVYGANTEMPFSEKEKADTQLSIYAATKKAT
                     ESMAHSYAHLFGVPTTMFRFFTVYGAWGRPDLALFKFVDAILDDRPIDVYNHGDMERD
                     FTYVGDLVRAIHLLMAAVPPPKDGRGEVSPNDSLSPVAPFRIVNIGNSEPVRLLDFIE
                     TIEEQLGKKATKNYMGMQPGDVRATWANADLLRDLTGYQPQTQVREGVAAFVEWFRDY
                     YGK"
     gene            2132..2563
                     /locus_tag="VHN55_00465"
     CDS             2132..2563
                     /locus_tag="VHN55_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEX2802448.1"
                     /translation="MRIYTIGYEAATQGEFVSALKEAGVERIIDVRALPNSRRPGFSK
                     TPLRNALAEAGIDYVHLRALGTPADGRAAARAGRHEELKRIYSGQLELPEAIAEGAKM
                     IELAGERPSALLCYERDPAACHRSLLLRAIAPDAEVVDLFA"
     gene            complement(2570..3025)
                     /locus_tag="VHN55_00470"
     CDS             complement(2570..3025)
                     /locus_tag="VHN55_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014076096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment family protein"
                     /protein_id="HEX2802449.1"
                     /translation="MAIPHGALIFVGDGKKMLFLRNEGDSGMIDLRTESHDERADPMD
                     REIKTDAPGTQSPRVGIGRDTMEETDFHQQGEDRWVIQAAEELNRRALSNDFDALVVV
                     APPKALGVLRKKLHKETERRIVLTVNKEMTDRPIPDIEELLVGEGAPPA"
     gene            complement(3095..>4653)
                     /locus_tag="VHN55_00475"
     CDS             complement(3095..>4653)
                     /locus_tag="VHN55_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HEX2802450.1"
                     /translation="AVAREKLLDRKWPGAEIRPYIALVEAVEPQGRKKNYQLSEAQVK
                     AILELRLHRLTALGRDEIGGELKELADSIGELLEILANRARLYEVMREEFDEVEAEFA
                     SPRKTELAAAADGIEDEDLIEREDMVVTVTMTGYIKRTPLSIFREQKRAGKGRSGMQT
                     KEEDAVTELFVTSTHNPVLFFSNIGRVYRMKVWRLPEGGPNTKGRPMVNLLPLAEGET
                     ISTVLPLPEDESEWGGLHIMFATRHGTVRRNSMDAFTNIPSNGKIAMKFVAGDDGNEA
                     DDADEGAEDTTDRLVGVRLLTEEDDVLLATRNGKAIRFMSTDVREFQSRNSTGVRGIR
                     LLGDDEVISMSILRRAGTTAEEREAYLRAPLWRGNEAAEGLKAERYAEIAEKEQFLLT
                     VTENGYGKRSSTYEYRRTKRGGQGIINIVTSERNGGVVASFPVTPGQQLMLVTNQGKM
                     IRTTVGDIRIAGRNTQGVTIFNVAEGEHVVSVARIDESDEEELEGEEKEIAPVPDAEV
                     GEDLASGEEE"
BASE COUNT          757 a         1541 c         1434 g          921 t
ORIGIN      
        1 gcttttcagc ctcagcgcgc gatcgagaag cgctggggag ttaatgaagc tgttgcggtg
       61 aatgccgcca agccgcgcga actcggcatt ctcgaggccg ggaatcatcc ggaaaatgcg
      121 cacctgttcg ccgtgcttca acttggtctg gaacccgacc atgttccaca aggtgccaag
      181 cgcgttgtcc tgccgaagct gcacgacggc atagggccag cggccggtgc gtggattgtc
      241 gagcccgacc ggcttcatcg gcccgtgacg aagggtctcc gccccccgct cggccatcac
      301 ttcgatcggc atgcagcctt cgaaataggg cgtgtccttc tcccaatcct tgaacggcat
      361 cttctcgccg tcgatcagcg cccggacgaa ggcctcgtac tgcggcttgt cgagcgggca
      421 gttgatgtaa tccttgcccc ccttgtccca ccgcgccgcc atccacgcga cctccatgtc
      481 gacgctgtcg cgatggacga ttggcgcgat cgcgtcgaag aaggccagcg cgccctgccc
      541 cgtttcggct gtgatcgatt cggcgagtgc ggagccggtc agcggtcccg tcgcgacgat
      601 cgccggccca tcaggcagtg aatccacccg ttcgcggacg atctcgatcc tgtcgtgatt
      661 ttcgagcgtg cgcgtgacct cggccgcgaa agcttcgcgg tccaccgcca gcgccgatcc
      721 cgcaggcacc cggtgccggt cggcggcgct catgatcagc gaatcgaggt cgcgcatttc
      781 ctggtggagg agcccgacgg cgttgtgttc ggcatcgtcg gagcgaaagc tgttggaaca
      841 caccatttca gccagccagt ccgtttcgtg cgccggggtc gtgtcgccgc cgcctcgcat
      901 ttccgaaatc cggacccgga ctccggcccg ggcgagttgc cacgcggctt cgctaccggc
      961 gagcccgccg ccgatgattt ggacttcagc attcatttcc ggccgtctag cgcgacgatc
     1021 gcacccgttc cagttgcgct tccggttgac ttggctcggc tgttcccgcc actgcccgcg
     1081 aaattccatc caaccgcgga catcgactct acatgcaacg cgtactgatc accggcactg
     1141 ccggattcat cggctatcat ctcgcagagc tgctgctcga ccagggctgc actgtgcacg
     1201 gctatgacgg gatgaccgac tattacgacg tcaacctgaa gcggcggcgc caccagcggc
     1261 tgctccagaa gccgaacttc gccgccaccg aagggatgct ggaggacttc gaaacgctgc
     1321 gcagggtgac gatggaattc catccggacg tgatcgtcca tctcgccgcc caggctggtg
     1381 tccgctacag cctcgaggag ccgcgcgcct atgtcgacgc caatatcgtc ggcaccttca
     1441 acatcctcga agtcgcccgc gagctcgcgc cgcagcacct tctgatggcg tcgacgtcgt
     1501 cggtatacgg cgcaaatacc gaaatgcctt tttccgagaa ggagaaggcg gacacccagc
     1561 tcagcatcta cgccgcgacg aagaaggcga cggagtcgat ggcgcattcc tatgcgcatc
     1621 tgttcggcgt gccgacgacg atgtttcgct tcttcaccgt ctacggtgcg tggggacggc
     1681 cggacctggc gctgttcaag ttcgtcgacg ccatcctcga tgaccgtccg atcgacgttt
     1741 acaaccacgg cgacatggag cgcgacttca cctacgtcgg cgacctggtc cgcgccatcc
     1801 acctgctaat ggcggccgta ccgccgccta aggacgggcg cggtgaggtc tccccaaacg
     1861 attccctgag ccccgtcgct ccattcagga tcgtcaacat cggcaattcg gagccggtcc
     1921 gccttctcga cttcatcgag acgatcgagg agcagttggg gaagaaggcg acgaagaact
     1981 acatgggaat gcagccgggc gacgttcgcg cgacctgggc taacgcagac ctcctgcgcg
     2041 atctcaccgg ctaccagccg caaacgcagg tgcgtgaggg cgttgccgcc ttcgtcgagt
     2101 ggtttcgcga ctattacggc aaataatgcc cctgcgaatc tacaccatcg gctacgaggc
     2161 ggcgacacag ggcgaattcg tgtcggcgct gaaggaggcg ggtgtcgagc gaatcatcga
     2221 tgtgcgtgcg ctgcccaatt cccggcggcc cggcttttcc aaaacgccgc tcaggaacgc
     2281 gctcgccgaa gccggcatcg attacgtcca cttgcgcgcc ctcggaacgc ctgcggacgg
     2341 acgtgcggcg gcccgggccg gccgccacga ggagttgaag cgaatctatt caggccagct
     2401 cgagcttccc gaagcaattg ccgaaggcgc gaagatgatc gagcttgccg gcgaaaggcc
     2461 gagcgctctg ctttgctatg agcgcgatcc ggccgcctgc catcgcagct tgcttcttcg
     2521 cgcaatcgcg cccgacgcgg aggtcgtcga cctgttcgcc tgaggagagt caggccggtg
     2581 gcgcgccttc gccgacaagc agttcctcga tgtcggggat cggccggtcg gtcatctcct
     2641 tgttcaccgt caggacgatc cgccgctccg tctccttgtg gagctttttg cggagcacgc
     2701 ccaatgcctt gggcggagcg acgaccacca gggcatcgaa atcattgctc agcgcgcggc
     2761 ggttcagctc ttcggcggcc tggatcaccc agcggtcctc gccttgttga tggaagtccg
     2821 tttcctccat tgtgtcccgg ccgattccga cccgcggcga ctgagtcccc ggcgcgtcgg
     2881 tcttgatttc gcgatccatg ggatcggcgc gctcgtcgtg cgattccgtt ctcaggtcga
     2941 tcatcccgga atcgccttcg ttgcgaagga acagcatctt cttgccgtcg ccgacgaaga
     3001 taagggcgcc gtgaggaatg gccatgggcg atttactcct ttggggtgat gtcagctcag
     3061 ctgaagcaac gccgccgaag gcacggacgt tcccctactc ctcctcgcca gaagccaggt
     3121 cctcgccgac ttcagcgtcg gggacgggcg cgatctcctt ctcttcgccc tcaagctctt
     3181 cctcgtcgct ttcgtcgatc ctcgcgacgc tgacgacatg ctctccttcg gcgacgttga
     3241 agatcgtcac tccctgcgtg ttgcggccgg cgatgcggat gtcaccaacc gtggtgcgga
     3301 tcatcttgcc ctggttggtg acgagcatga gctgttggcc cggggtaacg ggaaagctcg
     3361 cgaccacgcc gccattgcgc tcgctggtga cgatgttgat gatcccctgg cccccgcgct
     3421 tggtgcgccg gtactcgtag gtcgacgagc gcttgccgta gccgttctcc gtgacggtca
     3481 ggagaaactg ctccttctcc gcaatttcgg catagcgctc cgctttcagc ccttcggccg
     3541 cctcgttgcc gcgccaaagc ggcgcgcgca gataggcctc gcgttcctcg gcggtcgttc
     3601 ctgcgcgacg gaggatcgac atcgagatca cttcgtcatc gccaagcagg cggattccgc
     3661 gaacgccggt ggagttgcgc gactggaact cacggacgtc ggtcgacatg aagcggatcg
     3721 ccttgccgtt gcgggtggcg agcagcacgt catcttcctc ggtcagcagg cgtacgccga
     3781 ccagccggtc ggtcgtgtcc tcagcgccct cgtcagcgtc gtcggcctcg ttgccgtcgt
     3841 cccccgcgac gaacttcatc gcgatcttgc cgttgctcgg aatgtttgtg aacgcatcca
     3901 tgctgttccg ccggacggtg ccgtggcggg tggcaaacat gatgtgcagc ccgccccatt
     3961 cgctctcgtc ctcgggcagg ggaagcacgg tcgagatcgt ctcgccttcg gccaaaggca
     4021 ggaggttgac catcggccgc cccttggtgt tgggcccgcc ctcgggcagg cgccacacct
     4081 tcatccggta gacccggccg atgttcgaga agaacaacac ggggttgtgg gtcgaagtga
     4141 cgaacaattc ggtgaccgcg tcctcttcct tcgtctgcat gccggagcgg cccttgccgg
     4201 cgcgcttctg ctcgcggaag atcgatagcg gggtgcgttt gatgtagccg gtcatggtca
     4261 ctgtcacgac catgtcctct cgctcgatca ggtcctcgtc ctcgatcccg tcggcggcgg
     4321 cagcgagctc cgtcttgcgc ggggacgcga actcggcttc gacctcgtcg aactcctcgc
     4381 gcatcacctc gtagaggcgg gcgcggttgg cgaggatctc gagaagctcg ccgatcgaat
     4441 cggcaagttc tttcagctcg cccccaattt cgtcgcggcc gagcgcggtc aggcggtgga
     4501 gcctgagttc gaggattgct ttcacctgcg cttcggacag ctgataattc ttcttccggc
     4561 cctgcggctc gacggcttcg accagcgcga tgtacgggcg gatctcagcc cctggccact
     4621 tgcggtcgag cagtttctcg cgggctaccg ccg
//
LOCUS       DATAKH010000016         2010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_407,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000016 DATAKH010000000
VERSION     DATAKH010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VHN55_00480"
     CDS             complement(<1..511)
                     /locus_tag="VHN55_00480"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEX2802451.1"
                     /translation="METSGGIQASLAGRYASALFDLARDEKQIDAVGRSLDSLKQALA
                     DSRELTQLANSPLVDRDDAGKAFAAVADQLKLDPITTNFLGVLARNGRKDQLAPVIRL
                     FRRLAADHRGETTAEIVSAHPLSDDQVAALKAKLKARAARDVTIDASTDPNLLGGLIV
                     RIGSQMIDAS"
     gene            708..1169
                     /locus_tag="VHN55_00485"
     CDS             708..1169
                     /locus_tag="VHN55_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1203 domain-containing protein"
                     /protein_id="HEX2802452.1"
                     /translation="MTYRITGLDPEPFKTLFALSDKELAEHGMVRMTVTEKPGFPCRV
                     SLVDRDVGEQVILLNHVSHDVANPYRASHAIFVADAEQREFFDQVPPVFAARTLSLRA
                     FGEDGMMVDALITQPGEADAGIRTLFGNRGIAYIHAHNAARGCFSARIERC"
     gene            1163..>2010
                     /locus_tag="VHN55_00490"
     CDS             1163..>2010
                     /locus_tag="VHN55_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010162908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
                     /protein_id="HEX2802453.1"
                     /translation="MLMIADQDAWAAFERRDRSWDGRVIGAVKTTGIYCKPSCPARRP
                     KREHVTFFESGEEARSAGYRPCLRCRPDEVGRDREAVTKAVKLIEQAEEPPTLSELAE
                     AVGYAPHHFQRMFKRDLGVSPADFARALRAKRAEKHLQENGRVTDAIYDAGYSAPSRF
                     YADAKERMGMTPSAWRDGGRGETIRWTSFDSPLGRMLIAATSKGICRLTFDDSEASLQ
                     RLFPNASIVEDEGGMRQLVEGALTAIERPSAAPDLPVDVAGTAFQEAVWRELRKIPLG
                     ETRSYA"
BASE COUNT          358 a          641 c          681 g          330 t
ORIGIN      
        1 gcgaagcgtc gatcatctgg cttccgatcc tgacgatcag ccctccgagg agattggggt
       61 cagtgctcgc gtcgatagtg acgtcccgcg cggcgcgggc cttcagcttc gccttcaggg
      121 ccgcgacctg gtcgtcgctc aacgggtggg ccgaaacgat ctcggcagtg gtttcgccgc
      181 ggtggtccgc agcgagcctg cggaacagtc ggatgaccgg agcgagctgg tccttgcggc
      241 cgttcctcgc aaggacgccg aggaagttgg tcgtgattgg gtccagcttg agctggtcgg
      301 cgacagcggc gaaggccttg ccggcatcgt cgcgatcgac cagcggagag ttggcgagct
      361 gggtcaactc gcgcgaatcg gcgagcgcct gcttcagcga atcgaggctt cgcccgactg
      421 cgtcgatctg cttttcatcg cgggccaagt cgaacagagc ggacgcatag cgtcctgcta
      481 agctggcctg aatgccgccg gatgtctcca cgcgcccaaa gctccagaac tggaattgcc
      541 cccatgcgaa aatggggcgt ttgcacggcc ttacaccgca ccgcccccat gggttggcgc
      601 gcccgtagca gcgggtgcgg agcgatgcaa ggcggcgagc gcggcacttt cggtttgagc
      661 gcaagccgcg ggaagcgata gcgtgccgct gcggctaatc cccgcccatg acctaccgaa
      721 tcacaggatt ggaccccgag ccattcaaaa ccctgttcgc cctttccgac aaggagcttg
      781 cagagcacgg gatggtgcgg atgaccgtaa ccgaaaagcc gggctttccc tgtcgggtga
      841 gcctcgtcga tcgcgacgtc ggggagcagg tgatccttct aaaccacgtc agccacgacg
      901 tcgcgaaccc ctatcgcgca agccacgcaa tcttcgtagc cgatgcggag cagcgtgaat
      961 tcttcgacca ggttccgccg gtatttgcag cccgaaccct gtcgctgcgc gcattcggcg
     1021 aggacgggat gatggtggac gcgctgatca cccagcccgg cgaggccgac gcgggcatcc
     1081 gcacgctgtt cggcaaccgg ggaatcgcct acattcatgc ccataatgcc gctcgcggct
     1141 gcttctcggc gaggatagag agatgctgat gattgccgac caggatgcct gggccgcatt
     1201 cgagcgccgc gaccgcagct gggacggccg ggtgataggc gcggtcaaga ccaccggcat
     1261 ttactgcaag ccgagctgcc ccgcacggcg cccgaagcgc gagcacgtca ccttctttga
     1321 gtcgggcgag gaggcgcgct cggccggtta ccggccgtgc cttcgctgca ggccggatga
     1381 ggtcggccgc gaccgcgagg cggtgacgaa ggccgtgaaa cttatcgagc aggcggagga
     1441 gccgccgacg ctttcggagc tcgcggaggc ggtcggctac gcgccgcacc acttccagcg
     1501 gatgttcaag cgcgacctcg gcgtatcgcc ggctgacttt gcgcgggcat tgcgggccaa
     1561 gcgcgcagag aagcatctcc aggaaaacgg gcgagtgacc gacgccatct acgacgccgg
     1621 ctattcggcc ccgagccgct tctatgccga tgcgaaggag aggatgggaa tgaccccgtc
     1681 ggcgtggcgg gacggcgggc gcggcgagac gattcgctgg accagtttcg acagcccgct
     1741 cgggcgaatg ctgatcgcag ccacctcgaa aggcatttgc cgcctgacct tcgacgacag
     1801 cgaagcgtcg ctccagcggc tgtttcccaa cgcctcgatc gtcgaggacg agggcggaat
     1861 gcggcagctc gttgagggcg cgctaaccgc catcgagcgg ccctcggcag cgcccgacct
     1921 tcccgtcgac gtcgcgggaa ccgccttcca ggaagccgtg tggcgagagc ttcgcaagat
     1981 cccgttggga gagactcgaa gctatgccga
//
LOCUS       DATAKH010000017         3554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_8159,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000017 DATAKH010000000
VERSION     DATAKH010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3554
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8159"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1557
                     /gene="fusA"
                     /locus_tag="VHN55_00495"
     CDS             <1..1557
                     /gene="fusA"
                     /locus_tag="VHN55_00495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003042194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX2802454.1"
                     /translation="KGVVDLVNMRGIVWQDESLGANFDYVDIPDELKDKAAKYRHDLL
                     ETVVEQDDDVMMAYLEGEEPDADTIKKLIRKGTLGQAFVPVLCGSAFKNKGVQPLLDA
                     VVDYMPSPLDVPAIKGVNPDTDAEDTRPADDSAPFSALAFKIMNDPFVGTLTFARIYS
                     GKLAKGTVLNSVKDKREKIGRMLLMHANSREDIDEASAGDIVAIAGLKETTTGDTLCD
                     SNKPIILERMEFPDPVIELSVEPKTKADQEKMGIALSRLAAEDPSFRVSTDHESGQTL
                     IKGMGELHLDILVDRMKREFKVEANVGAPQVAYRESLAKAVDVDYTHKKQSGGSGQFG
                     RVKVTVTPGERGTGVQFFDEIKGGNIPREYIPSVEKGMRETAETGSLIGFPIIDFEIH
                     LTDGAYHDVDSSALAFEITGRGAMREVAQKAGIKLLEPIMKVEVVTPEDYLGDVIGDL
                     NSRRGQIQGTDSRGNAQVVEAMVPLANMFGYVNQLRSFTQGRAQYTMQFSHYEEVPQN
                     VADEVKAKLA"
     gene            1633..2823
                     /gene="tuf"
                     /locus_tag="VHN55_00500"
     CDS             1633..2823
                     /gene="tuf"
                     /locus_tag="VHN55_00500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEX2802455.1"
                     /translation="MAKAKFERNKPHVNIGTIGHVDHGKTTLTAAITKVLAETGGATF
                     TDYANIDKAPEERERGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTKEHILLAKQVGVPTMVVYLNKVDQVDDPELLELVELEIREELSK
                     REFDGDNIPIIAGSALAALEGKNDEIGKESILKLMAAVDEWVPTPERPLDKPFLMPIE
                     DVFSISGRGTVVTGRVETGVVKVGEEVEIVGIKDTQKTVVTGVEMFRKLLDQGQAGDN
                     IGALLRGVGREEVERGQVLAKPGSITPHTDFKAEVYVLSKDEGGRHTPFFANYRPQFY
                     FRTTDVTGEVELPSGTEMVMPGDNVNLGVKLIAPIAMDPGLRFAIREGGRTVGAGVVA
                     EITK"
     gene            2940..3251
                     /gene="rpsJ"
                     /locus_tag="VHN55_00505"
     CDS             2940..3251
                     /gene="rpsJ"
                     /locus_tag="VHN55_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEX2802456.1"
                     /translation="METQNIRIRLKAFDHRVLDQATGDIADTARRTGALIRGPIPLPT
                     RIEKFTVNRSPHVDKKSREQFEVRTYKRLLDIVQPTPQTVDALMKLDLAAGVDVEIKL
                     A"
     gene            3420..>3554
                     /locus_tag="VHN55_00510"
     CDS             3420..>3554
                     /locus_tag="VHN55_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEX2802457.1"
                     /translation="MRTGVIAKKVGMTRLFQADGRHVPVTVLQLDEVQVVGRREMDKD
                     G"
BASE COUNT          736 a         1099 c         1150 g          569 t
ORIGIN      
        1 aagggcgtcg tcgacctcgt gaacatgcgc ggcatcgtct ggcaggatga atcgctgggc
       61 gcgaacttcg actatgtcga catccccgac gagctcaagg acaaggcggc caagtaccgg
      121 cacgacttgc tcgagaccgt cgtcgagcag gacgacgacg tgatgatggc ctacctcgaa
      181 ggcgaggagc cggacgccga cacgatcaag aagctgatcc gcaagggtac gctcggacag
      241 gcgttcgtcc cggtgctgtg cggctccgcc ttcaagaaca agggcgttca gccgctcctc
      301 gatgcagtgg tcgactacat gccgagcccg ctcgacgttc ccgcgatcaa gggcgtcaat
      361 ccggacaccg acgccgagga cacgcgtcct gcggacgata gcgctccgtt cagcgcgctg
      421 gcgttcaaga tcatgaacga cccgttcgtc gggaccctga ccttcgcgcg catctattcg
      481 ggcaagctgg ccaagggcac ggtcctcaac tcggtcaagg acaagcgcga gaagatcggg
      541 cgaatgctcc tgatgcacgc gaacagccgt gaggatatcg acgaggcgtc ggcgggcgac
      601 atcgtcgcca tcgccggtct caaggagacc acgacgggtg acacgctgtg cgactccaac
      661 aagccgatca ttcttgagcg gatggagttc ccggacccgg tcatcgagct cagcgtcgaa
      721 cccaagacca aggccgacca ggagaaaatg ggcatcgccc tgtcgcggct ggcggccgag
      781 gacccgtcat tccgggtgtc gacggaccat gaatcgggcc agacgctcat caagggaatg
      841 ggcgagctcc acctcgacat cctcgtcgat cgcatgaagc gcgagttcaa ggtcgaggcc
      901 aatgtcggcg ccccgcaggt cgcctaccgc gagtcgctcg cgaaggcggt cgacgtcgac
      961 tacacccaca agaagcagtc gggcggctcc ggtcagttcg gccgggtcaa ggtcaccgtg
     1021 actcccggcg agcgcggaac gggcgtgcaa ttcttcgacg agatcaaggg cggcaacatc
     1081 ccgcgcgaat atattccgtc cgttgagaag ggcatgcgcg agaccgccga gaccggctcg
     1141 ctgatcggct tcccgatcat cgatttcgaa atccacctga ccgacggcgc ttaccacgac
     1201 gtcgattcat cggcgctggc tttcgagatc accggccgcg gtgcgatgcg cgaagtggcc
     1261 cagaaagccg gaatcaagct gctcgagccg atcatgaagg tcgaggtcgt cactcccgag
     1321 gattatctcg gcgacgtcat cggcgacttg aacagccggc gcgggcagat ccagggcacc
     1381 gacagccgcg gcaacgcgca ggttgtcgag gcgatggtcc cgctcgccaa catgttcggc
     1441 tacgtcaacc agctgcgatc gttcacccag gggcgggcgc agtacacgat gcaattttct
     1501 cattacgagg aagtgccgca gaacgtcgcc gacgaggtga aggcgaagct ggcataacgg
     1561 taattttgta gctatgggcg cgtccgcaca tgggcggcgc gcccgcaaaa atcgaaaaac
     1621 gagaggcgta aaatggcgaa ggctaaattc gagcggaaca agccgcacgt gaacatcggg
     1681 accatcggtc acgtcgacca tggcaagacg acgctgacgg cggcgatcac caaggtgctc
     1741 gccgagaccg gcggcgccac gttcaccgac tatgcgaaca tcgacaaggc tccggaagag
     1801 cgcgagcgcg ggatcaccat ttcgacggcg cacgtcgaat atgagacggc taaccgccac
     1861 tacgcgcacg tcgattgccc gggccacgcc gactatgtga agaacatgat caccggcgcc
     1921 gctcagatgg acggcgcgat cctggtggtt tcggccgccg acggcccgat gccgcagacc
     1981 aaggagcaca tcctgctcgc caagcaggtc ggcgttccga ccatggtcgt ttacctgaac
     2041 aaggtcgacc aggtcgacga tcccgagctc ctggagctgg tcgagctgga aatccgcgaa
     2101 gaactcagca agcgcgagtt cgacggcgac aacattccga ttatcgccgg ctcggcgctg
     2161 gccgcgctcg agggcaagaa cgacgagatc ggcaaggaat cgatcctcaa gctgatggct
     2221 gcggtcgacg agtgggtccc gaccccggag cgtccgctcg acaagccgtt cctgatgccg
     2281 atcgaggacg tgttctcgat ctccggccgc ggcaccgtcg tgaccggccg cgtcgagacc
     2341 ggagtcgtca aggtcggcga ggaagtcgag atcgtcggaa tcaaggacac ccagaagacg
     2401 gtcgtcaccg gcgtcgagat gttccgcaag ctgctcgacc agggccaggc tggcgacaac
     2461 atcggcgcgc tgcttcgcgg cgtcggccgt gaggaagtcg agcgcggcca ggtcctggcc
     2521 aagcccggct cgatcactcc gcacaccgac ttcaaggcag aggtctacgt cctgtcgaag
     2581 gacgaaggcg ggcgccacac gccgttcttc gccaactatc gtccgcagtt ctatttccgg
     2641 acgacggacg tcaccggcga ggtcgagctt ccgtccggca ccgaaatggt gatgccgggc
     2701 gacaacgtga acctcggcgt caaactgatc gctccgatcg ccatggaccc gggccttcgc
     2761 ttcgcaatcc gcgagggcgg ccggaccgtc ggcgcggggg ttgtcgcaga gataacgaag
     2821 taatataggg cgccagccgc gcgggtctaa gattcgcgcg gctcgcactg taatgttgtt
     2881 gaatttcgcg ggcctcggct tcggctgcgg ttcgccggct ctttcgcatc ggtagggata
     2941 tggaaacgca gaacatccgg attcgcctga aggcgttcga tcatcgagtg ctcgatcagg
     3001 caactggcga catcgccgat acggcgcgcc gcacgggtgc actgattcgc gggcccattc
     3061 ccctgccgac gcgcattgag aagttcaccg tcaaccgctc gccgcacgtc gacaagaagt
     3121 cgcgcgagca gttcgaggtg agaacgtaca agaggctgct cgatatcgtg cagccgaccc
     3181 cgcaaacggt cgacgctctg atgaagctgg accttgccgc gggcgtcgac gtggagatca
     3241 aactggcctg agccggtttg gagtcacaga cggaggatac cgcggagcca ttggctccgg
     3301 ctgcgtcccc gccgctcctt tccaggagca atagcccagg cggggcacgc ggaaaatttg
     3361 gatgggctgc aagcacttgg ggattgtctc caagtgcctc tgtgtaggag caactggtcg
     3421 tgcgcaccgg cgtgatcgcg aagaaagtag gaatgacccg cctgttccag gcggacggac
     3481 ggcacgtgcc ggttaccgtc ctgcagctgg acgaggttca ggtcgtcggc cgccgcgaaa
     3541 tggacaagga cggc
//
LOCUS       DATAKH010000018         6966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_424,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000018 DATAKH010000000
VERSION     DATAKH010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6966
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1611
                     /locus_tag="VHN55_00515"
     CDS             <1..1611
                     /locus_tag="VHN55_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017499238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX2802458.1"
                     /translation="EIGIALLLFIIGLELRPGRLWRLRNDIFGLGLAQVVLCGLAISL
                     LLHVAVGLSPEASLAIGLPLGLSSTAQVLPMLRSENELNTPQGERAFSVLLFQDLSIV
                     PLITIIAAMARVPPDPTAPSGWTLALYTVGAIAGLVLAGRLVLNPLFRLVGRFGEREL
                     FVVAGLFAVVGASAIMHSLHLSVALGAFVAGVMLAESPYRHEVESDVEPFRSILLGLF
                     FLSVGMLLDLRVIADQPLFVLGVAVGVIVTKTLVIAGLARIFGNDWPRSVRLGLLLSQ
                     AGEFGFVLFAQATTAALILPEAASLFGAVVTLTMAATPFLMRITDWLERREESAEGLD
                     GPEESPETTAIVVGYGRFGQTVAQMMMGKGIAVTLIDKTPSMIETAQEFGTKVYYGNG
                     LRLDLLRAAGAETAQVIAFCNDNSGGELNREALRAVLKAFPQASVMVRVYDRRHLIAL
                     RGLDLTLAKRELFESAIVMGKAALRASGIAAQDVERVEREYRLRDCERLERQAESGDL
                     HAGEERSFASRPLADDAAGSADEAPEVG"
     gene            1710..1844
                     /locus_tag="VHN55_00520"
     CDS             1710..1844
                     /locus_tag="VHN55_00520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802459.1"
                     /translation="MSRAVIIFIVILVVIAGAVVFLSSQTREVPTQPVEIDVTNAAGN
                     "
     gene            1828..3594
                     /locus_tag="VHN55_00525"
     CDS             1828..3594
                     /locus_tag="VHN55_00525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802460.1"
                     /translation="MRPAIKRLLLVGTAAALAIPAIAQVQNTVAAPTVSNTPAPATQP
                     AQPDPGPQPAQTETRPETVSGEAEQETLNQPPPTPIEYPRFARRDPFTAGALDPRQLG
                     IGGDPWGMASGVFLSSLMRQMDTPVASRWLHIGLRGALLAAAHSPRGVNPVDWAAERA
                     WLLLRMGEADAARMVISSVDTDRFTPKMTQVAVQSALANSDPLALCAIGDGLRKAEPR
                     IVAIVQAICSGLNGESELASAQIESARRRGPIGGIDLALAQKVVGATSDSGTATTIEW
                     EPVEALTAWRYGLATATAMSPPARLLDSATPRLRAWHARAPLIPFQDRLESARIATGL
                     GVFSSRALIDFYSWIYDSTDPNELGGSDAWQLRLAFAANDQGTRLAAMRQLWRLGGDR
                     LQREASRAMLATAASRIQPARQIQGDASNLIASMLAAGLDSQAARWTDVVGQMDGGDA
                     DTAWAMLALGAPDGAGVDVSPGRVNAFIGRDSSKGRKRSALLVAGLAALGRLDAGAAS
                     RLNSRHGLNIGRSSRWTHMIDAAARRDQTGSVLVLAGTGLQAADFESLPSSQLFHIVM
                     ALRNSGQEFLARMVAAEALART"
     gene            3591..4478
                     /locus_tag="VHN55_00530"
     CDS             3591..4478
                     /locus_tag="VHN55_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010187014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase"
                     /protein_id="HEX2802461.1"
                     /translation="MTASGDALVDRFLDMLAAEAGASANTLTAYRSDLLRASRDLGAE
                     LGEAGRDDLAKLGQKWAGLAASTVARRSSALRRFYRFLVDDGLRSDDPSPALPNPQLQ
                     RPLPKILGESEVEALFEAAGDKAASGEPLALRNLALLELLYGSGLRASEVVALPRGAV
                     RKGQPFLILSGKGSKERLVPISSRAEAAVGLWLENVPESSRWLFPSGKAHITRVRLFQ
                     LVRQMAADAGIAPDRISPHVLRHAFATHLLSGGADLRVLQALLGHADIATTQIYTHVD
                     AARLVKLVNERHPLAERSR"
     gene            4513..5454
                     /locus_tag="VHN55_00535"
     CDS             4513..5454
                     /locus_tag="VHN55_00535"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEX2802462.1"
                     /translation="MLTYLDFEKPIAELEARVRELKEAAENGDVDIQPEVAKLEAKAS
                     KLLTDTYSKLSPWQKAQVARHPERPHLKDYIAGIAEEFIPLAGDRAYAEDPAILGGFA
                     RIDGRKVMLIGHEKGDDTASRLKHNFGMAKPEGYRKAIRLMSLADRFGLPVVTLVDTP
                     GAFPGVEAEERGQAEAIARSTEQCLELGVPMIAAIVGEGGSGGAVAIATANRVLMFQH
                     AIYSVISPEGCASILWRTADKAADAAEAMRITANDLQALGVIDRIVPEPVGGAHRDRE
                     AAIATLKAAILEELDGCASMKPKQLIGQRRAKFLAIG"
     gene            5539..>6966
                     /locus_tag="VHN55_00540"
     CDS             5539..>6966
                     /locus_tag="VHN55_00540"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX2802463.1"
                     /translation="MRKSLLFLSAAAIFVTATAVPAQYAVRTLDPRLVAEAQREHTQI
                     LEEYGGAESGQRAAYVSSVGNRVAAYSGIANPASAYRFTLLNSAVENAFSVPGGYIYV
                     TRQLLTLMDDEAELAFAIGHEVGHVAGGHAQAREQVARRNSVGSVLASIFGGFGGFGQ
                     AVAQWAARDAVLHTLRFSREQEYAADTLGMRYLIGAGYDVSGAAEMLAALTRNSALQA
                     RVQGSDNRRLPEWASTHPLSVNRMQRALADARATGRLGTGVKRSDEFLSRLDGIYVDD
                     DPEQGIIDGRTFTHPDLLIQFTVPVGYLMQNGTRAVSIAGSAGKAEFGGGRYDGSLEN
                     YVQLLMQSLAGNRRIAVPPPQRTVINGIPAAYTVVRGRGSSGPVDISVMAYQWAPRTV
                     YHFITLTPGGTAMGPFAQTANTIRKITAAEAAEIRPRVIDVVTVRPGDTVQSLAGQMA
                     YRDFRLERFLSLNGLDPNARLVPGQK"
BASE COUNT         1154 a         2284 c         2308 g         1220 t
ORIGIN      
        1 gaaatcggaa tcgctttgct gctgttcatc atcgggctcg agcttcggcc gggccggctg
       61 tggcggcttc gcaacgacat cttcgggctc gggctggcgc aggtggtcct ttgcgggctc
      121 gcgatcagcc tgcttctcca cgttgcggtc ggcctgtcgc cggaggcatc gctggcgatc
      181 ggccttccgc ttgggctgtc gtccaccgcc caggtgctgc cgatgctgcg ctcggaaaac
      241 gaactcaaca cgccgcaggg cgagcgggcc ttttcggtgc tgctgttcca ggatctgtcg
      301 atcgtcccgc tgatcacgat catcgccgca atggcgcgag tgccgccgga cccgaccgcc
      361 cccagcggct ggacgcttgc gctctatacc gtcggggcga tcgccggact cgtgcttgcc
      421 gggcgactgg tcctcaatcc gctgttccgg ctcgtcggcc gcttcggcga gcgcgagctg
      481 ttcgtcgtcg ccggcctgtt cgcggtcgtc ggagcgtccg cgatcatgca ttcgcttcac
      541 ctgtcggttg cgctcggcgc cttcgtcgcg ggcgtgatgc tcgccgaatc gccgtaccgc
      601 cacgaggtgg aaagcgacgt cgagccgttc cgctcgatcc ttctcgggct gttcttcctc
      661 tcggtcggga tgctcctcga cctgagggtc attgccgacc agccgttgtt cgtcctcggc
      721 gttgcagtgg gggtgatcgt caccaagacg ctggtgatcg caggacttgc gcgcatattc
      781 ggcaacgact ggccgcgaag cgtgcgtctc ggcctcctgc ttagccaggc cggcgagttt
      841 gggttcgtgc tgttcgccca ggcgacgacg gctgcgctga tcctacccga ggccgcctcg
      901 ctgttcggcg cggtcgtgac cctgaccatg gcggccactc ccttccttat gcgaatcacg
      961 gactggctgg agcggcgcga ggagagcgcg gagggcctcg acggaccgga ggagtcgccc
     1021 gaaacgacgg caatcgtcgt cggctacggc cgtttcggcc agaccgtcgc ccaaatgatg
     1081 atgggcaaag gcatcgccgt gacgctgatc gacaagactc ccagcatgat cgagacagcg
     1141 caggagttcg ggaccaaggt ctattatggc aacgggctcc ggctcgacct gcttcgagcg
     1201 gccggtgccg agactgcgca ggtgatcgcc ttctgcaacg acaattcggg cggcgagctg
     1261 aaccgcgaag cgctgagggc ggttctcaag gctttcccgc aggcgtcggt gatggtgcgc
     1321 gtctacgatc gccgccacct gatcgcgttg cgcggcctcg acctgacgct tgccaagcga
     1381 gagctgttcg aaagcgccat agtcatgggc aaggctgccc ttcgcgcgag cggcatcgca
     1441 gcccaggacg tggagagggt ggagcgcgaa tatcggctcc gtgattgcga gcggctcgag
     1501 cggcaggcgg aaagcggcga tcttcacgcc ggggaggaac ggtcgtttgc gtcgcggccg
     1561 ttggccgatg atgctgcggg ctccgcggac gaggcacccg aggtcggcta gcggcgcctc
     1621 ctggccttta ccgtcgaagg aggggctata caggggcgcc gaaggtcggg caaaggtgcg
     1681 gcgaccccaa actacagcgg aagggcccga tgtcgcgagc cgtaatcatt ttcatcgtca
     1741 ttctcgtcgt gatcgcggga gcggtcgtgt tcctctccag ccagactcgt gaagtaccca
     1801 cgcagccggt cgagatcgac gtcaccaatg cggccggcaa ttaagcgact cctccttgtc
     1861 ggcacagctg ctgcactcgc gatcccggcg atcgcgcagg tgcagaacac ggttgctgcg
     1921 ccgaccgtat cgaacactcc cgcgccggcg acgcagccgg cgcagccgga tcctgggccg
     1981 caaccggccc agaccgaaac gcgcccggag accgtcagcg gggaggccga acaggaaacc
     2041 ctgaaccagc cgccgccgac tccgatcgaa tatccgcgtt tcgcccgccg cgatcccttc
     2101 accgccggcg ctctcgatcc ccgtcagctc gggatcggcg gcgacccgtg gggaatggcc
     2161 agcggcgttt tcctgtcatc gctgatgcgg cagatggaca cgcctgttgc ctcgcgctgg
     2221 ttgcatatcg gccttcgcgg cgctctcctc gccgccgcgc attcgccgcg gggcgtcaac
     2281 cccgtcgatt gggctgccga gcgcgcatgg ctattgcttc ggatgggtga ggccgatgcc
     2341 gcgcgaatgg taatctcaag cgtggacacc gaccggttca cgccgaagat gacgcaagtg
     2401 gcggtccaga gcgcgcttgc caattccgat ccgctggcgc tgtgcgcaat tggcgacggg
     2461 ctgcgaaaag cggaaccgcg aatcgttgca atcgtgcagg cgatctgttc cggcctcaac
     2521 ggggagtcgg agttggcctc ggcgcaaatc gaatcggcgc gccggcgcgg gcccatcgga
     2581 ggcatagacc tggcgctcgc tcagaaggtc gtcggagcga cttcggattc cggtaccgct
     2641 acgacgatcg agtgggagcc ggtcgaggcg ctgacggcgt ggcgttacgg ccttgccacc
     2701 gctaccgcga tgagcccgcc ggcgaggctt ctcgactccg caacaccacg gcttcgcgcc
     2761 tggcacgcgc gggcaccgct gatcccgttc caggaccggc tcgaatccgc ccgtatcgcg
     2821 accggccttg gagtcttttc ctcccgcgcg ctgatcgatt tctattcgtg gatttacgat
     2881 tccaccgacc ccaatgaact gggcggcagc gacgcctggc agttgcggtt ggccttcgcc
     2941 gccaacgacc agggaacccg gcttgccgca atgcgccagc tctggcggct tggcggtgac
     3001 cggctccagc gcgaagcttc gcgcgcgatg ttggcgactg ccgcctcgag gatccaaccg
     3061 gcccgccaaa ttcagggtga tgcctccaat ctcatcgcgt ccatgctcgc agccgggctc
     3121 gattctcaag cggcgcgctg gacggatgtg gttggccaga tggacggcgg agacgccgac
     3181 accgcctggg caatgcttgc gctcggggct cccgatgggg ctggcgtcga tgtcagccct
     3241 ggccgggtga acgccttcat cggccgcgat tccagcaagg gcaggaagcg cagcgcactc
     3301 ctggttgcgg gcctcgccgc gctcgggcgg ctcgacgcgg gcgcagcatc gcgactcaat
     3361 tcgcggcacg gcctaaacat cgggcgctcg tcgcgctgga cccacatgat cgacgctgcg
     3421 gcgcggcggg accagacagg cagcgtcctg gtgcttgcag ggaccgggct ccaggccgcg
     3481 gatttcgaat cgctaccgtc gtcccagctt ttccacatcg tcatggccct tcggaacagc
     3541 ggtcaggagt tccttgcccg aatggtcgcg gccgaggcgc ttgcccggac gtgacggcct
     3601 ccggcgacgc cctggtcgac cgcttcctcg acatgctcgc cgccgaggcc ggcgcttcgg
     3661 ccaataccct cactgcgtat cgaagcgacc ttttgcgtgc atcgcgggac cttggcgcgg
     3721 agctgggcga ggcgggccgc gacgaccttg ccaagctggg acagaaatgg gccggcctcg
     3781 ctgcatcgac cgtcgcccgc aggtcctctg cgctccggcg cttctatcgc ttcctcgtcg
     3841 acgacggcct tcgcagcgat gacccatctc ctgcgcttcc caacccgcag ctgcagcggc
     3901 cgttgcctaa aattctcggc gaaagcgagg tcgaggcgct gttcgaggcg gcgggagaca
     3961 aagcggcaag tggcgagcct ctggccttgc gaaaccttgc gctgctcgag cttctctacg
     4021 gctcgggcct gagggcgagc gaagtcgttg cgctacctcg gggcgcggtt cgcaaggggc
     4081 agccgttcct gatcctaagc ggcaagggat cgaaggagcg gctggttccg atctccagcc
     4141 gggccgaggc ggcggtcggg ctgtggctgg aaaatgtccc cgaatcgagc cggtggttat
     4201 tccccagcgg caaggcgcac ataacccggg tccggctgtt ccagcttgtc cggcagatgg
     4261 ccgcggacgc aggcatcgct cccgaccgga tcagcccaca cgtacttcgc catgcctttg
     4321 ccacgcacct gctttcgggc ggcgccgacc ttcgcgtcct tcaggcgctt ctcggccacg
     4381 ccgacattgc gacgacccag atctacacgc atgtcgacgc cgcacgattg gtgaaattgg
     4441 tgaacgagcg gcacccgctt gcggagcgtt cgcgttgacg cttcgcttcg ccacgcttac
     4501 ccgcgccagc gcatgttgac gtacctcgac ttcgaaaaac cgatcgccga gctggaggcg
     4561 cgcgttcgcg agctgaagga ggcggccgaa aacggggacg tcgatatcca gcccgaggtc
     4621 gcgaagctcg aggcgaaagc gtcgaagctc ctgactgaca cctattccaa gctgtccccc
     4681 tggcagaagg cgcaagtggc gcggcatccc gagcggccgc atctcaagga ttacatcgcc
     4741 ggaatcgccg aggagttcat cccgctcgcg ggtgaccgcg cctatgccga agatcccgcg
     4801 atcctcggcg gcttcgctcg gatcgacggc cgcaaggtga tgctgatcgg gcatgaaaag
     4861 ggcgacgaca ccgcgtcccg gctgaagcac aatttcggga tggccaagcc cgagggctac
     4921 cgcaaggcga tccggctgat gagtctcgcc gaccgattcg ggcttcccgt cgtcacgctc
     4981 gtcgacacgc ccggcgcttt cccgggagtc gaggccgagg agcgcgggca ggcggaagcc
     5041 atcgcccgct cgaccgagca gtgcctggaa cttggcgtgc cgatgatcgc tgcgatcgtc
     5101 ggcgagggcg gctccggcgg cgcggtagcg attgccacgg cgaaccgcgt cttgatgttc
     5161 cagcatgcga tctactcggt gatctcgccc gaaggctgcg cctcgatcct gtggcggacg
     5221 gccgacaagg ctgccgacgc cgccgaagcg atgcgcatta ccgccaacga ccttcaggcg
     5281 cttggagtca tcgacaggat cgttcccgag ccggtgggag gagcgcatcg cgaccgcgaa
     5341 gcggccatcg caactctgaa ggctgcgatc ctcgaggagc tggacggctg cgcgtcgatg
     5401 aagccgaagc aattgatcgg acagcgacgg gccaagttcc tggcaatcgg ctgacgaggt
     5461 ggcaggaacc gctccagtca tctctcgttc aaatccgcga cgcaacattc tcccgaacaa
     5521 agccaaaaga gaggagcgat gcggaagagt ctgctgttct tgtctgccgc cgccatattc
     5581 gtcacggcca cggcggttcc ggcgcaatat gcggtccgga cgctcgatcc gcggctggtc
     5641 gccgaagcgc aacgcgaaca tacgcagatc ctcgaggaat atggaggcgc cgaaagcgga
     5701 cagcgcgcag cttacgtaag ttcggtcggc aaccgtgtcg cggcctattc cggcattgcc
     5761 aatccggcga gcgcctatcg attcacgctg ctcaattcgg ccgtcgagaa cgccttttcc
     5821 gtccccggtg gctacattta cgtcactcgc cagctgttga cgctgatgga cgacgaggcg
     5881 gagcttgcct ttgcgatcgg gcacgaggtc ggccatgtcg ccggcggcca tgcccaggcg
     5941 cgagagcaag tcgcgcgacg caattcggtc ggaagcgtgc tcgcgtcgat cttcggaggc
     6001 ttcggcggct tcggccaggc cgttgcccaa tgggccgccc gcgatgcggt tcttcatacg
     6061 ctgaggtttt cgcgcgaaca ggaatatgcc gccgacacgc tggggatgcg ctacctgatt
     6121 ggtgccggat acgatgtttc cggggccgcc gaaatgctcg ctgccctgac ccgcaattcg
     6181 gcactccagg cgcgggttca ggggagcgac aatcggcggt tgccggaatg ggcgagcacc
     6241 cacccgctga gcgtcaatcg gatgcagcga gcgcttgccg atgcccgtgc aacgggccgg
     6301 ctggggaccg gagtcaagag gagcgacgaa ttcctgagcc gactcgacgg gatctacgtc
     6361 gatgacgatc ccgaacaggg gattatcgac ggccgcacct tcactcatcc cgaccttctg
     6421 atccagttca ccgtgcccgt cggctatcta atgcagaacg gcactcgggc ggtgtcgatt
     6481 gcgggctccg cgggcaaggc ggagttcggc ggcgggcggt acgacggaag cctggaaaac
     6541 tatgtccaat tgctgatgca aagcttggcc ggcaaccgcc gaatcgcagt gccgccaccg
     6601 cagcgcactg tcatcaacgg catccccgcc gcttatacgg tcgttcgcgg cagaggttcg
     6661 tcaggcccgg tcgatatcag cgtaatggcg taccaatggg ctccccgaac ggtctatcac
     6721 ttcatcaccc tcacgcctgg tgggacagcg atggggccgt tcgcgcagac ggcgaacacg
     6781 atccggaaaa tcacagcggc cgaagccgcc gaaatccgcc cgcgagtcat cgatgtggta
     6841 acggtccggc cgggcgacac ggtgcagtcg ctagccgggc aaatggccta tcgcgatttc
     6901 cggctggagc ggttcctgtc gctcaatggc cttgatccga acgcgaggct tgtgcccggc
     6961 caaaag
//
LOCUS       DATAKH010000019        15973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_461,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000019 DATAKH010000000
VERSION     DATAKH010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 15973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15973
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..395
                     /locus_tag="VHN55_00545"
     CDS             150..395
                     /locus_tag="VHN55_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008993651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802464.1"
                     /translation="MHDGPEWFAAKRFGYGSGFPIAWQGWLVLAIYLAVMVGAAYALH
                     GSPLALIGVVLPATVLLMLITAKTTRGGWRWRWGKDD"
     gene            395..1318
                     /locus_tag="VHN55_00550"
     CDS             395..1318
                     /locus_tag="VHN55_00550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010405060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2802465.1"
                     /translation="MMIALFIAAAAAAAQPITAPGPQGPLAGTLLDAGPTAPVVLIIP
                     GSGPTDRDGNNPLGVKAAPYRLLAEELAGMGVSTVRIDKRGMLGSKDAIADANAVRIA
                     DYADDTHAWVKSIRERTGARCVWVLGHSEGGLVALEAAQKADGLCGVILVSAVGRKMG
                     DVIREQLRANPANAPLLEVAMPAIDSLEAGKSVDSSTMPAPLQKLFAPQIQPFLMDLM
                     ASDPAKLAAGVKLPMLIVQGGRDLQVSESDAKALAAAQPRAKLVIVPQMNHVLKDVGS
                     DDRAANFATYGDPSLPVDSAIVEAIADFLKP"
     gene            complement(1315..3156)
                     /locus_tag="VHN55_00555"
     CDS             complement(1315..3156)
                     /locus_tag="VHN55_00555"
                     /inference="COORDINATES: protein motif:HMM:NF025381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4231 domain-containing protein"
                     /protein_id="HEX2802466.1"
                     /translation="MNREPPDLRLQVEPGAGIHPPRLPFVLSVGITGHRVEALPEGAL
                     ETIVERLGTALVEIKARAVNLYEREAGCFADCPPRMLFVSPLADGSDQIAADIALELG
                     FELHAILPFAREAYRGTLHNSALARFDDLVDRAACVLELPGGLDEQRAAFVMAGRATI
                     AHCDVLIALWDGLPPRGRGGTGEVVELALTRGTPLVHVPVDPAQSLGLRWSAFDPSVV
                     TRHAESSVERSFTTDHLDQVLTGLLSPPPDRNERGFIATFQRERSRLWKTRVEYPLML
                     AAAGVSRFERSAWRGDISAAYIREDWERYQSGCWAPSGLSNPLAPLEQWYGWTDSLAS
                     HFAQCHRSGHVFNFILAAFAVLLALTALPFPEWKPALALVEVVVILSILINTRIGNRQ
                     QWHRRWLDYRQLAERLRPMRSLKLLGIAAPDPPGTAANPISRRWVEWYAAGVWRAIGF
                     PRGRIGANQAPALATAISAHELWPQVDYHHRSAKQVEALDGRLETLGLAVFGATLLSC
                     IALLVAIAVDHEWALANAKWFTIAAAGLPAIGTAIFGIRVQGDYQGTAVRSEQTAIVL
                     RQVAERLETESPDLPRAADLVEQAARLMTADLGDWALLNQQHDLSVG"
     gene            complement(3178..3561)
                     /locus_tag="VHN55_00560"
     CDS             complement(3178..3561)
                     /locus_tag="VHN55_00560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802467.1"
                     /translation="MSKKITFKPHQNGGSVDWKVGNQAAGKHKTKVRKDSGAEALNFS
                     LSNDAIAAGYKFDTSDPIWVCEDNGRCPSSPSAHGQIKLLDATDSSVSVADLNTEQVT
                     LRYQLNVTNGKGARVPIDPIIQNVL"
     gene            complement(3581..5719)
                     /locus_tag="VHN55_00565"
     CDS             complement(3581..5719)
                     /locus_tag="VHN55_00565"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HEX2802468.1"
                     /translation="MNKWTRPFEWSGASAGPAEGRTAPARHHYFAFLSYSHEDSADAD
                     WLHQELERFRVPSSIAGRLTGNGVIPRRLTPIFRDRQELAAADDLGEEIREALEASRC
                     LIVLCSPAAARSKWTSAEIEAFKRAHPDGCVIAAIVAGEPFASERTDETEEECLPPPL
                     RQKFDKRGRPTGKRNEPLAADLREGRDGRRRGLLKIVAGILGLALDDLVQRDHLRRQR
                     RLAGIAIGSFAGMFVATALAVTAIEARDSARDQRREAEGLVEFMLGDLKDKLEPIGRL
                     DALDGVGTRVLAYYEKRDTADLSDAALAQRSKALSLMGEVAVQRRDLDGASRLYRGAM
                     AGTGEAIRRQPDDPQRLFDHAQNVFWIGQIAIFQGSLPQAASAFREYKRLADRMVALD
                     PNSIKWRMEVYNAEANLAGVLTKQRRFEEAAALWNQLFRMISALTTADPRNREYRQSL
                     VESLAWYADAERDLGRLANATALRERHVALLSQLESETGDVTYRQKLMSAQRYLGGLY
                     AIRGRNDDALRQLRSAIATSDRLTATDSENSRPLEEGFMARLAAANILLASGARDEAA
                     SMTQAGCELARNLLSKDPTIPAWRGGLRDCLMSRALLASASASHRDASALAAQAVQVA
                     RTVKTTDPADDAFHVARALRTLGDVRRASGDAAGAQSAWREAAAVIPRGIAERPDELN
                     ERAMIEARVGRRADAAAIRAQLARMGYRST"
     gene            5841..6971
                     /gene="ispG"
                     /locus_tag="VHN55_00570"
                     /gene_synonym="gcpE"
     CDS             5841..6971
                     /gene="ispG"
                     /locus_tag="VHN55_00570"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEX2802469.1"
                     /translation="MSIRPWRDIERRKSRQIMIGSVPVGGDAPISVQTMTNTPTEDSK
                     ATIEQIRRCEEAGADIIRVSCPTAAATASLKEIVREANVPIVADIHFHYKRALEAADA
                     GAACLRINPGNIGSEERVREVIAAARANGCAIRIGVNAGSLEKDLLEKYAEPCPEALV
                     ESALDHIRILEDHGFRDYKVAVKASDVFLAVAAYQQLVDQVDCPLHLGITEAGGLIGG
                     TVKSAIGIGNLLWAGIGDTIRVSLSAEPEEEVRVGYEILKSLGIRSRGVRVVSCPSCA
                     RQGFDVIRTVETLEERLQHIKTPMSLSVLGCVVNGPGEARETDIGITGGGNGTHMVYL
                     SGITDHHVKDGDMIDHIVRLVEQKAAEIEASEADPATLDAAE"
     gene            6989..7891
                     /locus_tag="VHN55_00575"
     CDS             6989..7891
                     /locus_tag="VHN55_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2802470.1"
                     /translation="MNRVPQHPILAFSVALAAVGVLSIMDALMKALVIALGIYAVSVW
                     RSLVMLVISSAAYLPRRRAWPSRPTLRIHIARGAVVMVMALLFFWGIGRVPLAQAIAL
                     TFIAPLVALLLAVLFLGERIGPRAIVGSVTAFAGVLVIVVGQARGQLGPEVLLGSLAI
                     VGSALCYAANIVLMRRQAVAAKPLEIAFFQSLVVAVLWLAVIAFAGLPQWPELGWWGW
                     IIVAATMSLAGALLFAFAYARADAGYLAVTEYSAFLWASVLGWLVFGEHVTGYTLAGA
                     LLIVAGCLIASRRVADAPPEIEAA"
     gene            complement(7888..8523)
                     /locus_tag="VHN55_00580"
     CDS             complement(7888..8523)
                     /locus_tag="VHN55_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1345 domain-containing protein"
                     /protein_id="HEX2802471.1"
                     /translation="MAAREGIGNTIAPPRFIAFMILLVVAVPVAMRYLDTAHAIMIGF
                     DVAATIFLLSSITLLGTREAAEIREHAQKNDGNRVLLLALTGVVMTVLLVVMGVQTVG
                     GTPQPFTKILIIGTLATAWLFSNTIYALHYAHLAYLDPQRGCAGISFPDTDVPVYWDF
                     VYFAFTLGMTFQTSDVQIGSTAIRRVVTFHCFAAFIFNIGILAFTIGVIGS"
     gene            8573..8887
                     /locus_tag="VHN55_00585"
     CDS             8573..8887
                     /locus_tag="VHN55_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEX2802472.1"
                     /translation="MPWVWLIVGGLFEIGFTTSLRFVEGFRNVPWTIAFLVSVAISMA
                     LLELASRSIPMGTAYAVWGGIGAVGTVIVGLLWFGEPASLVRVLLIFVIVAAIAGLRL
                     AS"
     gene            complement(8876..10480)
                     /locus_tag="VHN55_00590"
     CDS             complement(8876..10480)
                     /locus_tag="VHN55_00590"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF006006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX2802473.1"
                     /translation="MRNLVFVPLLALAACATSAEDPRFGGVPIFSDPAADGTVSEQAP
                     FIGTAQAATAQSLDRIAALNPVLHAVIATDPTAMAQARQVDASGKQGPLAGKPVLLKD
                     NIEAAGPMPTTAGSLALVNNVTGRDSPLVARLRDAGAVIIGKANLSEWANFRSSSSIS
                     GWSAVGGQAGNPYALDRNGCGSSTGSATAVAAGMVRFAIGTETDGSVTCPASLNGIVG
                     LKPTVGLVSRTHIVPISASQDTAGPMAPTVLETAQLLTVIAGSDSADQATKEADSRKT
                     DYGAGLDANSLSGKRIGVMRFAAGFGTDELFEAALAVLKARGATLVDIKDFDDEGLGR
                     NEFKVLLVEFKAGLNDYLATTPATVRTRTLADLIAFNKAHAPQEMPLFGQEIFEQAEK
                     TKGLDDPAYKKARRASFNAAGPNGIDRLLKEHRLVALVGPTMPPAWKIDAVNGDQISG
                     GGAGNLAAIAGYPHLTVPMGLVKGLPVGLSFIGPKWSEKLLLDLGFAFEQARGPFPQP
                     TLMPSVESGPQVAPALEPQDLPVSGG"
     gene            complement(10495..11778)
                     /gene="murA"
                     /locus_tag="VHN55_00595"
     CDS             complement(10495..11778)
                     /gene="murA"
                     /locus_tag="VHN55_00595"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEX2802474.1"
                     /translation="MDSIWIKGGKRLEGKIAISGAKNAALALLPCALLTADKLTLTNL
                     PRLADVDTFSHLLNQLGVSTSVAGVKKGEFGRRMTLQADDIASTVAPYDMVRKMRASV
                     LVLGPMLARAGEATVSLPGGCAIGDRPIDLHLKALECMGAEIELAAGYVKASAPGGRL
                     AGGDYSFPVVSVGATENALMAAVLATGRTQLFNAAREPEIVDLCNLLVAMGGKIEGIG
                     SSHLIIDGVEALHGTTYEVMPDRIEAGSYACAAGITGGSIDLIGARPDDMRATLNALA
                     QAGLMLEFHDKGIKVSADGPLKPLALSTSPFPGFATDMQAQFMAMLSRAEGDSFLEET
                     IFENRYMHVPELRRMGANVDIHGRSAIVHGVDTLAGAEVMATDLRASMSLILAGLAAE
                     GETEVLRVYHLDRGYERLEEKLSAVGATIERRSSG"
     gene            complement(11825..12160)
                     /gene="clpS"
                     /locus_tag="VHN55_00600"
     CDS             complement(11825..12160)
                     /gene="clpS"
                     /locus_tag="VHN55_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004209974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEX2802475.1"
                     /translation="MGDGPGRGDGLDDDLEIGVATRTRPKTKKPSNYKVLMLNDDYTP
                     MEFVVLVLQRFFSMSIEDATRVMLQVHQQGVAVCGVFTYEVAETKVAQVIDFARENQH
                     PLQCTLEKA"
     gene            complement(12309..12998)
                     /locus_tag="VHN55_00605"
     CDS             complement(12309..12998)
                     /locus_tag="VHN55_00605"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HEX2802476.1"
                     /translation="MEIEMVSETNTPAKAVEETVEVQNDAAVKVAKAASPTAVKPAKP
                     ARKNSAAKVRRKARAASAKPQARANKRNNEMKNDSTNIFAGFNAFPGASAFEKLFTEA
                     TGRGEEAVKRSRKAAEELADLYRGNIDAFVEAGRIAATGAQSIGQEVVAKSRDNLEQT
                     ANTVRSFAEAKSPTELLQLQSDFARTAFDRFVEESSSLTESMVKLAGEAFQPISNRAS
                     ASVEKLNTIAA"
     gene            13105..13758
                     /gene="gmk"
                     /locus_tag="VHN55_00610"
     CDS             13105..13758
                     /gene="gmk"
                     /locus_tag="VHN55_00610"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008995369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEX2802477.1"
                     /translation="MDGSADQVSRARRGLLIVLSSPSGAGKTTLSRMLMETDPSITMS
                     VSATTRPKRPGEVEGADYNFVDESEFDRLIAADEFVEWAPVFGYRYGTPKAPVKAALK
                     DGRDILFDIDWQGTQQLHAAMGEDLVRIFLLPPSMSELEERLNNRGTDSDGVIADRMA
                     RAEAEISHWAEYDYVLVNEDASRCLAEIRTIVAAERLKRARQIGLVAFVRDLVGPAH"
     gene            complement(13755..14450)
                     /locus_tag="VHN55_00615"
     CDS             complement(13755..14450)
                     /locus_tag="VHN55_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043461 - proton-transporting ATP synthase
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP12 family protein"
                     /protein_id="HEX2802478.1"
                     /translation="MKRFWKAAAAVPEDGGWALQLGGKPLRTPAREPLLVPSEHLAQA
                     VADEWNAAGEMVDPREMPLTGLANAAIDRIAPDPQAFAAELAKYGESDLACYRAEGPR
                     RLVERQEKNWDQLLAWARRRFDVDFCTTSGVVHVPQPEPTLRQLGNAVAANDPYRLAG
                     LAPLITIGGSLVAALAVLEGALTAEAAWDAVTIDEQWQREQWGSDEEAEAVLEARRRD
                     FLAAARFLELLGS"
     gene            complement(14447..14674)
                     /locus_tag="VHN55_00620"
     CDS             complement(14447..14674)
                     /locus_tag="VHN55_00620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802479.1"
                     /translation="MADEDLWKRRFAIFSAARLIGLCTVLAGIAVAFTGLLRPGGWPA
                     VGAVLVVLGLIDAVGAPMLLRKHWEREDRSE"
     gene            complement(14667..15332)
                     /locus_tag="VHN55_00625"
     CDS             complement(14667..15332)
                     /locus_tag="VHN55_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX2802480.1"
                     /translation="MTKLAIFDCDGTLVDSGATIYRALSEAFETHRLELPPARDCRKV
                     IGLSLTEAMAALVPHAPERDHLLLAETYKGCFFRARQEGRVEEPLFDGIVQLLDDLES
                     DDWLLAVATGKSHRGLRHCLESHGLNARFISLQTADRHPSKPSPEMALAAMAEAGASA
                     ARTVVIGDTSFDMAMAVAAGATAIGAAWGYHDSDELVAAGARSVAEAPGDVLRLATEA
                     VNG"
     gene            complement(15329..>15973)
                     /locus_tag="VHN55_00630"
     CDS             complement(15329..>15973)
                     /locus_tag="VHN55_00630"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX2802481.1"
                     /translation="KLVHRLDKDTSGVLLVARSARAAAFFSKSFSGRTAKKIYWALVL
                     GVPSADEGLIDAPLAKQPGTGGEKMHVDEEQGQSAKTRWRVIDRAGNRAAWVELQPLT
                     GRTHQLRAHMMAIGHPIVGDGKYGGAESFLTGGISRKLHLHARRLKIDSPGGGKIDVT
                     AQLPDHFAHTLEMLGFELAEAERAAAPARRARPAKPRRETRRGERRSRGERAKR"
BASE COUNT         2664 a         5097 c         5320 g         2892 t
ORIGIN      
        1 cggggacggc cggcaaagaa gtaggaggac gacgatgttc atggcctttc acgcgagccc
       61 ggctcaccgg ccgatactga tcgcagtggc actcttgctg ctcgcaaccg ggatcgccgt
      121 ggcagccctc ctgggctgac gaggctgcga tgcacgacgg ccccgagtgg ttcgctgcaa
      181 agcgcttcgg ttatggcagc gggtttccga tcgcgtggca gggatggctc gtcctggcca
      241 tctatctggc ggtcatggtc ggtgccgcat acgcgcttca tggatcgccg ctggcgctga
      301 tcggcgtcgt cctgccggcg actgtgctct tgatgttgat cactgcgaaa acgacgcgcg
      361 gcggctggcg ctggcgctgg ggaaaggacg attgatgatg attgcacttt tcattgcagc
      421 agccgctgcc gccgcgcagc cgataaccgc gccggggccg cagggcccgc tggccggaac
      481 cttgctcgat gccgggccga ctgccccagt cgtccttatc atccccggct ccggtccaac
      541 cgaccgcgac ggcaacaacc cgctcggagt gaaggcggcg ccgtatcggc tgcttgccga
      601 agagcttgcc ggcatgggcg tatcgaccgt tcgaatcgac aagcgcggga tgctgggaag
      661 caaggacgcc attgccgacg ccaatgccgt ccggatcgcc gattatgcag acgatacgca
      721 cgcttgggtc aagtcgatcc gtgaacgcac aggagcgcgt tgcgtctggg ttctcggcca
      781 cagcgaaggc ggtcttgtcg cgcttgaagc cgcgcagaag gccgacgggc tttgcggagt
      841 gatcctggtc agcgcagtcg gccggaagat gggcgacgtg atccgcgagc agctccgggc
      901 caatcctgcc aatgcgccgc ttctggaagt cgcgatgccg gcgatcgact cgctcgaggc
      961 aggcaagagc gtcgattcct cgacgatgcc ggctccgctg caaaagctgt tcgcgccgca
     1021 gatccagccg ttcttgatgg acctgatggc ctcggatccc gcgaagctag cggccggggt
     1081 caagctgccg atgctgatcg tccagggcgg tcgcgacctg caggtctcgg aatccgacgc
     1141 gaaagctctc gcggcagctc agcctcgggc aaagctggtc atcgtcccgc agatgaatca
     1201 cgtgctgaag gacgtgggca gcgacgatcg cgcggcgaac ttcgcgacct acggcgatcc
     1261 gtctcttccg gtggactcgg cgatcgtcga ggcgattgcc gatttcttga agccttagcc
     1321 gaccgacaag tcgtgctgct ggttgagcag cgcccagtcg ccgaggtcgg cggtcatcag
     1381 gcgtgccgcc tgttcgacga ggtcggcggc ccggggcagg tccgggcttt cggtttcaag
     1441 ccgctcggcc acctgccgca ggacaatggc cgtctgttcc gaccggaccg ccgttccttg
     1501 gtagtcgccc tggactcgaa tcccgaagat cgctgttccg atcgccggca ggccggcggc
     1561 ggcgatggtg aaccatttcg cgttggcgag cgcccactca tgatccacgg ctatcgcgac
     1621 gagcagggcg atgcagctca acaaagtggc tccgaagacc gccaggccca gcgtttcgag
     1681 acggccgtcg agcgcttcca cctgctttgc cgagcgatgg tgataatcga cttgcggcca
     1741 taactcgtgc gccgaaatcg cggtggccag tgcgggagcc tggttcgcgc cgatccggcc
     1801 gcgcggaaac ccgatcgctc gccatacgcc tgccgcatac cactcgaccc accggcgaga
     1861 gatcggattc gccgccgttc cgggcggatc gggagcggcg attcccagga gcttcaggct
     1921 cctcatcggg cgcaatcgct ccgccagctg acgatagtcg agccagcggc ggtgccattg
     1981 ctgccgattg ccaatcctgg tgttgatgag gatcgacagg atcaccacga cttcgaccag
     2041 cgccagcgcc ggtttccatt cggggaacgg cagcgcggtc agcgcgagca ggactgcgaa
     2101 cgccgccagt atgaaattga acacgtgtcc gctccggtgg cattgggcga aatggctggc
     2161 gagcgaatcg gtccagccat accattgctc gagcggcgcc agcgggttgg acaggccgct
     2221 cggtgcccag cagccgcttt gatagcgctc ccaatcctcg cggatataag ccgccgaaat
     2281 gtcgccgcgc catgcgcttc gttcgaaccg cgaaacaccg gcggcagcaa gcattagcgg
     2341 atattcgacg cgcgttttcc aaagccggct gcgctcgcgc tggaacgtgg cgatgaagcc
     2401 gcgctcgttg cggtcgggcg gtggcgacaa cagcccggtc aggacctgat cgagatggtc
     2461 ggtagtaaag ctccgctcca cggagctttc ggcgtggcgg gtgacgaccg acggatcgaa
     2521 cgcgctccag cggaggccga gcgactgggc aggatcgact ggaacatgga ccagcggcgt
     2581 gccgcgggtc agcgccagct cgacgacttc cccggtgccc ccgcgaccac gcggagggag
     2641 cccgtcccac agcgcgatca ggacgtcgca atgcgcgatc gtcgcccggc cagccatcac
     2701 aaaggcggcg cgctgctcat cgaggccgcc tggaagttcc aggacgcagg cggcgcggtc
     2761 gacaagatcg tcgaaccgcg ccagcgcgga attatgcagc gtcccgcgat aagcttcgcg
     2821 cgcaaaaggc aggatcgcat ggagctcaaa gcctagctcg agagcgatgt cggcggcgat
     2881 ttggtcggag ccgtcggcca gcggcgagac gaacagcatc cgtggcgggc aatctgcgaa
     2941 gcagccggct tcgcgttcgt agagattgac cgcgcgcgcc ttgatctcga ccagcgcggt
     3001 gccaaggcgc tcaacgatgg tctcgagcgc tccctcggga agcgcctcca cgcgatgccc
     3061 ggtaatgccg acgctgagca cgaacggaag gcgcggcggg tgaatgcctg cccctggctc
     3121 gacctggagg cggagatcag gcggttcgcg gttcaagctg ggttcgcgcg ctgacggtca
     3181 aagaacgttc tggatgatgg ggtcgatggg cactctcgcg ccttttccgt tggtcacgtt
     3241 caactggtac cgaagcgtaa cctgctcggt gttgagatcg gccacgctga cgctgctgtc
     3301 ggtcgcgtcg agcagcttga tctgcccatg cgcggacggg gacgaggggc atcgaccatt
     3361 gtcttcgcag acccagatcg gatccgaagt gtcgaacttg tagccggccg cgatggcatc
     3421 gttgctcaac gaaaagttca gggcttcggc gccggaatcc ttgcgcacct tggtcttgtg
     3481 cttgccggcg gcctggttgc cgactttcca gtcgacggag ccaccgttct gatgtggctt
     3541 gaacgtgatt ttcttactca tcggtcactc tccgctcttt tcatgtgctt cggtatccca
     3601 ttcgcgccag ctgcgcccgt atcgccgctg catccgcgcg acggccgacc cttgcctcga
     3661 tcatagcgcg ctcgttcaac tcgtcgggcc gttcggcgat tccacgaggg ataaccgccg
     3721 ccgcttcccg ccacgccgac tgcgctccag ctgcatcgcc cgaagccctg cgaacgtcgc
     3781 ccagggtgcg cagcgcacgg gcaacatgga aggcgtcgtc cgccggatcg gttgtcttga
     3841 ctgtccgcgc cacctgcacc gcctgagccg caagcgcgga cgcatcgcga tgggaggccg
     3901 acgcgctggc caggagcgct ctggacatca ggcagtcgcg aagcccgcct cgccaggccg
     3961 gtatggtggg atccttgctc agcagattgc gagccagttc gcagccggcc tgagtcattg
     4021 aggccgcctc atcgcgcgcg ccgctcgcga ggaggatatt cgcagccgcg agccgcgcca
     4081 tgaagccctc ttcgagcggc ctgctgtttt cggaatccgt cgccgtcagc ctgtcgctgg
     4141 tggcgattgc cgaccgaagc tggcgaaggg catcgtcgtt ccgcccgcgg atcgcataga
     4201 ggccgccgag gtagcgctgt gcggacatca gcttttgccg ataggtcacg tcaccggtct
     4261 ctgattccag ctgcgagagc agcgcgacat gccgctctcg caacgccgtg gcgttggcaa
     4321 gccgccccag atccctctct gcatcggcat accaggcgag cgattcgacg agcgactggc
     4381 ggtattcccg gttacgcggg tccgccgttg tcagggcact gatcatccgg aacagctggt
     4441 tccataaagc ggccgcctct tcgaagcggc gctgctttgt aaggacgccg gcgagattgg
     4501 cctcggcgtt gtagacttcc atccgccact tgatgctgtt cgggtccagc gcgaccatcc
     4561 ggtccgccag ccgcttgtat tcgcggaacg ctgaagcggc ctgcggcaac gatccttgga
     4621 agatcgcgat ctgcccgatc cagaacacgt tctgcgcgtg atcgaacagc cgctgcggat
     4681 cgtcaggctg gcgccgtatg gcctcgccgg tgcccgccat ggcaccgcga tacagccgcg
     4741 aagctccgtc gaggtcgcgc cgttgaaccg caacttcacc catcaggctc aaggcctttg
     4801 accgttgtgc aagcgccgcg tcggaaaggt cggcggtgtc ccgcttttcg taataggcga
     4861 gcacccgcgt tccgacgccg tcgagcgcgt cgagcctccc gatcggctcc aacttgtcct
     4921 tgagatcgcc gagcatgaac tcgacgagcc cctccgcttc acgacgctgg tcgcgggcgg
     4981 agtcccgcgc ttcgatcgcg gtgacagcaa gagcagtagc aacgaacatc cccgcaaatg
     5041 agccgattgc aattccggcg agccgccgct gtcggcgcaa atgatcgcgc tgcaccaggt
     5101 cgtcgagcgc gagtccgagg atccccgcga cgattttcag aaggccgcgg cggcgtccgt
     5161 cgcggccttc gcgcaggtcg gcggccaagg gttcgttgcg cttcccggtc ggccggccgc
     5221 gcttgtcgaa tttctgtcgc agggggggcg gaaggcactc ctcttccgtt tcgtcggtgc
     5281 gttcgctcgc gaatggctcg ccggcgacga tagcggcgat gacgcagccg tccggatgcg
     5341 cgcgcttgaa ggcttcgatc tctgcactcg tccatttcga cctggcggct gcgggcgagc
     5401 agagcacgat caggcagcgc gatgcttcga gggcctcgcg tatctcctcc ccaaggtcgt
     5461 cggcagcggc gagctcctgg cggtcgcgga agatgggagt cagtcgccgg ggaatgaccc
     5521 cgttgccggt cagtcggccg gcaatgctcg aagggactcg aaaccgctcg agctcctggt
     5581 ggagccagtc ggcgtcggcg ctgtcttcat ggctgtagct caggaaggcg aaatagtggt
     5641 gcctggcggg cgcggtcctg ccctcggcgg gcccagccga agcaccactc cactcgaacg
     5701 gccgggtcca cttgttcact ggcgcccccg cgagtcttcc gcccaagccg tatcacggct
     5761 ggccatttgc cgccaaccac cagaagttag cgaactttcc gcctttgccg cggctcaccc
     5821 gagcacctat atgcacggcc atgtccattc ggccctggcg cgatatcgag cggcgcaagt
     5881 cgcggcagat catgatcggc tccgtccccg tgggcgggga cgcgccgatc agcgtccaga
     5941 ccatgaccaa tacgccgaca gaggactcca aggcgacaat cgagcagatc cgccgctgcg
     6001 aagaggccgg cgcggacatc atccgagttt cgtgcccgac cgcggctgcg accgcttcgc
     6061 tcaaggagat cgttcgggaa gcgaacgtgc cgatcgtcgc cgacattcac ttccactaca
     6121 aacgcgcgct cgaagctgcg gacgcgggag ccgcgtgcct aaggatcaat cccggaaaca
     6181 tcggctccga agagcgggtc cgcgaggtta ttgcggcggc gcgggcgaac ggctgcgcga
     6241 tccgtatcgg cgttaatgcc gggagcctcg aaaaagacct gctcgaaaaa tatgccgagc
     6301 cgtgcccgga ggcgctcgtc gagagcgctc tggaccatat ccggatcctc gaggaccacg
     6361 gatttcgcga ctataaggtc gcggtgaagg cctcggacgt cttcctcgcc gtcgccgcct
     6421 accagcagct cgtcgatcag gtcgattgcc cgctccacct cgggatcacc gaggccgggg
     6481 gattgatcgg cggaacggtc aaatccgcga tcgggatcgg caacctcctg tgggccggga
     6541 ttggtgacac gatccgggtg tcgctgtcgg ccgagccgga ggaagaagtc cgcgtcggct
     6601 acgagattct caagagcctc ggaatccgaa gccgcggcgt gcgtgtcgtt tcctgcccaa
     6661 gctgcgcccg ccagggtttc gacgtgatcc ggacggtcga gacgctcgaa gaacggcttc
     6721 agcatatcaa gacgccgatg tcgctgtcgg tgctcggctg cgtcgtcaac gggcccggcg
     6781 aggcgcgcga gaccgacatc gggatcaccg gcggcggcaa cggaacgcac atggtctatc
     6841 tgtcgggcat caccgatcac catgtgaaag acggcgacat gatcgaccac atcgtaaggc
     6901 tggtcgagca aaaggcggcg gagatcgagg cgtcagaggc cgacccggcg acgctcgacg
     6961 cggctgaata agtcgatatt ggcggcgcgt gaaccgcgtc ccgcagcatc ccatcctcgc
     7021 cttctccgtg gcgctggccg cggtcggcgt cctgtccatc atggacgcgc tgatgaaggc
     7081 actggtgatc gcgctcggta tttacgcggt cagcgtttgg cgctcgctgg tcatgctggt
     7141 catctcaagt gccgcctacc tgccccggcg gcgggcgtgg ccgagccgcc cgaccttgcg
     7201 aatccacata gcgcggggcg cggtggtgat ggtgatggcg ctgctcttct tctgggggat
     7261 cggccgcgtg ccactcgcgc aggcgatcgc gctcactttc atcgctccgc tcgtcgcgct
     7321 tctgcttgcg gtgctgttcc tcggcgagcg gatcgggcct cgcgccatag tcggatcggt
     7381 gacagcgttc gccggtgtcc tggttattgt ggtcggccag gcgcgcgggc agctcgggcc
     7441 ggaggtgctg ctcggaagcc tcgcaatcgt cggctcagct ctctgctacg ctgccaacat
     7501 cgtcctgatg cgccgccagg cggttgcagc gaagccccta gagatcgcgt tcttccagtc
     7561 gctcgtggtg gcggtcctgt ggcttgcggt cattgcattt gccgggcttc cgcaatggcc
     7621 ggagctcggt tggtggggct ggattatcgt cgcggcgacg atgtcgctgg cgggggcact
     7681 gctgttcgcc ttcgcctatg cgcgcgcgga cgcagggtat ctggcggtga cggaatatag
     7741 cgccttcctc tgggcgtccg tcctcggctg gctcgtcttc ggcgaacatg tcactggata
     7801 tacgctggct ggagctctgc tgatcgtcgc gggttgcctg atcgcgtcgc gccgtgtcgc
     7861 cgacgcgccg ccggaaatcg aagccgccta gctaccgatc actccgatcg tgaaggcgag
     7921 gatgccgata ttgaagatga acgcggcgaa gcagtggaaa gtcaccaccc ggcggattgc
     7981 cgtcgacccg atctgcacgt cggatgtctg gaacgtcatc cccagggtga aggcgaaata
     8041 gacgaaatcc caatagaccg gcacgtccgt gtccggaaag ctgatgccgg cacagcccct
     8101 ttgcggatcg agataggcga ggtgggcgta gtgaagcgca tagatcgtgt tgctgaacag
     8161 ccacgcagtc gcgagagtcc cgatgatcag gattttcgtg aagggctggg gagtgccgcc
     8221 gaccgtctga acgcccatga cgacgaggag caccgtcatt accactccgg tcagcgcaag
     8281 cagcaggacc cggttcccgt cattcttctg cgcatgctcg cggatctcgg ctgcctctcg
     8341 agtgccgagc aaggtgatcg acgacagcag gaagatggtg gccgcgacat cgaatccgat
     8401 catgatcgcg tgagccgtgt cgagatagcg catggcgacc gggacggcga cgacgaggag
     8461 aatcatgaac gcgatgaagc gtggcggagc aatcgtgttg ccgatgcctt cgcgggcggc
     8521 catggacggg cagattagcg cgcgatcgcc gcgcgtccag cgggagcaat ctatgccctg
     8581 ggtatggctg attgtcggtg ggctgttcga gatcggcttc acgacctcgc ttcgcttcgt
     8641 cgaagggttc cgcaacgtcc cgtggacgat cgccttcctg gtctccgtcg caatcagcat
     8701 ggcgttgctc gagcttgcgt cgcgttcgat cccgatgggc acggcttatg cggtctgggg
     8761 cgggatcggg gccgtgggta cggtcatcgt cggccttctt tggttcggcg agccagcatc
     8821 gcttgtgcgg gtgctgctga tcttcgtgat cgtcgcggcg attgccggtc tgcggctagc
     8881 ctcctgagac aggaaggtcc tgcggctcca aggctggagc gacttgcggg ccggactcga
     8941 cggacggcat cagcgtcggc tgaggaaacg ggccacgcgc ctgctcgaat gcaaagccga
     9001 ggtcgagaag cagcttttcc gaccatttcg ggccgataaa gctcagcccc acgggcaggc
     9061 ccttcaccag ccccatcggc accgtcaggt ggggatagcc ggcgatggct gccaggtttc
     9121 cggccccgcc gccggaaatc tggtcgccgt tgaccgcgtc gatcttccac gccggcggca
     9181 tcgtcggccc gaccagggcg actagtcggt gctccttcag cagcctgtcg atgccgttcg
     9241 gcccggccgc gttgaagctg gctcgccggg ccttcttgta ggcggggtcg tcgaggcctt
     9301 ttgtcttctc ggcctgctcg aagatctcct ggccgaacaa aggcatttcc tgcggcgcgt
     9361 gcgccttgtt gaacgcgata aggtcggcga gcgttcgcgt ccgcacggtt gccggagtgg
     9421 tggcgagata gtcgttcagg ccggccttga actcgacgag cagaaccttg aactcgttgc
     9481 gtcccaggcc ttcgtcatcg aagtccttga tgtccaccaa cgtcgcaccg cgcgctttca
     9541 gcaccgccaa tgccgcttcg aacagctcgt cggtgccgaa tcccgcggca aagcgcatca
     9601 cgccgatacg cttgccggat agggaattgg cgtcgagacc cgccccgtag tcagttttgc
     9661 gcgaatccgc ttccttcgtc gcctgatccg cggaatcgct gccggcaatt acggtcagga
     9721 gctgggcggt ttcgagaacg gttggcgcca tggggcctgc cgtatcctgg ctggcgctga
     9781 tcggaacgat gtgggtgcgg ctgaccagcc cgacggtcgg cttcaatccg acgatcccgt
     9841 tgagcgacgc gggacaggtg accgagccgt cggtttcggt gccgattgca aagcggacca
     9901 tgcccgccgc gaccgcggtg gcgctgccgg tcgatgagcc gcagccgttg cggtcgagcg
     9961 cgtaagggtt gcccgcctgg ccgccgactg cgctccagcc ggagattgag ctgctggagc
    10021 ggaagttcgc ccattccgac aggttcgcct tgccgatgat gacagctccg gcgtcgcgca
    10081 ggcgcgcaac cagcggcgag tcgcggccgg tgacattgtt cactagcgca aggctgcccg
    10141 cagtggtggg catcgggccg gccgcttcga tattgtcctt gaggagcaca ggcttgccgg
    10201 caagcggtcc ctgcttgccc gacgcgtcaa cctggcgcgc ctgggccatt gccgttggat
    10261 cggtggcgat gacggcatgg agcacgggat tgagggcggc gatccgatcg agcgactggg
    10321 cggtagcggc ttgcgccgtg ccgatgaacg gggcctgctc ggagactgtc ccgtctgcgg
    10381 ccggatcgga gaagatcggg acgccgccga agcgcggatc ttccgccgaa gtcgcgcacg
    10441 cggcgagtgc gagcaaaggc acgaaaacga gattacgcaa cggcaagcct ccccctatcc
    10501 cgaacttctc cgctctatcg tagcaccgac tgcggaaagc ttctcctcaa gacgttcata
    10561 gcccctgtcg aggtggtaga cacgaagcac ttcggtctcg ccctcggcgg cgaggcccgc
    10621 caggatcagg ctcatcgagg ccctgaggtc ggtcgccatc acttccgccc cggccagggt
    10681 gtcgactccg tgaacgatcg ccgagcggcc gtggatatcg acattcgcgc ccatccgccg
    10741 aagctccggg acgtgcatgt agcggttctc gaaaatcgtt tcttcgagga agctgtcgcc
    10801 ctcggcgcgg ctcagcatgg ccatgaactg ggcctgcatg tccgtcgcaa agccggggaa
    10861 gggcgaagtc gatagggcta gcggcttgag cgggccgtcg gcgctgacct tgatgccttt
    10921 gtcgtggaac tcgagcatca gcccggcctg ggcaagcgcg ttcaacgtcg cccgcatgtc
    10981 gtcgggacgg gcgccgatca agtcgatgct tccgccggta atccccgcgg cgcaggcata
    11041 acttcccgcc tcgatccggt ccggcatcac ctcataggtg gtgccgtgga gcgcttcgac
    11101 tccgtcgatg atcaggtgcg atgagccgat gccctcgatt tttccgccca tggccaccag
    11161 caggttgcac aggtcgacga tttccggctc tcgagcggcg ttgaataact gggtccggcc
    11221 agtggcgagg accgcagcca tcaacgcatt ttcggtggct ccgaccgata ccaccgggaa
    11281 gctgtagtcg cccccggcca ggcgcccgcc gggcgcgctc gccttcacgt aacccgcggc
    11341 aagctcgatt tcggcgccca tgcattcgag cgccttgagg tggaggtcga tgggccgatc
    11401 gccgatcgcg cagccgcccg gcagcgacac agtcgcctcg ccggcgcgcg cgagcatcgg
    11461 tccgaggacg aggaccgagg cgcgcatctt ccggaccatg tcgtagggag cgaccgtgga
    11521 ggcgatgtcg tccgcctgga gagtcattcg acggccgaac tcgccctttt tcactccggc
    11581 aacgctggtc gagacgccca actggttgag gaggtggctg aaagtgtcga cgtcggctag
    11641 ccgaggaaga ttggtcaggg tcagcttgtc ggcggtcagc agcgcgcagg gcaaaagcgc
    11701 gagcgccgca ttcttcgcgc cgctgatggc gatcttgcct tcgaggcgct tgccgccctt
    11761 gatccaaatg ctgtccactg ccgccgttta gcggacgcgg gcagcggcgc aacagcggct
    11821 cagatcaggc tttctcgagc gtgcactgaa ggggatgctg gttctcgcga gcgaagtcga
    11881 tcacttgggc aaccttggtc tccgcgactt cgtaagtgaa gacgccgcac accgcgactc
    11941 cctgctggtg gacctggagc atgacgcggg tagcgtcctc gatgctcatc gagaagaagc
    12001 gctggagcac gagcacgacg aactccatcg gcgtgtagtc gtcgttgagc atcagcacct
    12061 tgtagttgga cggcttcttg gtcttcgggc gagtgcgagt cgcgaccccg atctcgagat
    12121 cgtcgtctag accgtcaccg cgtccggggc cgtcccccat gctcgtcaca tgccaagtca
    12181 tagctgtcgg taaatatggc acggtcggaa cgcgccgcaa ggctggagcg atgcgtggag
    12241 cgcagaaaaa aggcggccgc tccgtttgga gcggccgcct gcggtgcctg acgggagggg
    12301 aggagttgtc aggcagcgat tgtgttgagc ttctcgacgc tcgcgctggc gcggttcgag
    12361 atcggctgga aagcctcgcc ggcgagcttg accatcgatt cggtcaggct cgagctctct
    12421 tcgacgaaac ggtcgaaggc ggtccgggcg aagtcgctct gcagctgaag aagctcggtc
    12481 gggctcttcg cctcggcgaa cgagcgaacg gtgttcgccg tctgctcgag gttgtcgcgg
    12541 ctcttggcga cgacctcctg gccgatcgac tgggcgccgg tggcggcgat tcggccggcc
    12601 tcaacgaacg catcgatgtt gccgcgatag aggtcagcaa gctcctcggc ggccttgcgc
    12661 gagcgcttca cggcttcctc gccgcgaccc gtcgcttcgg tgaacagctt ttcgaacgcg
    12721 gaagcgccgg gaaaggcgtt gaaaccggcg aaaatgttgg tggaatcgtt cttcatctcg
    12781 ttattcctct tgttggcgcg ggcctgcggc ttggcgctgg cggccctggc tttgcggcga
    12841 accttcgccg ctgaattctt ccgtgccggc ttggccggct tcacagccgt cggagaagca
    12901 gccttggcca ccttaacggc ggcgtcgttc tgcacttcga ccgtctcttc gacagccttg
    12961 gcaggggtgt tcgtttccga aaccatctct atctccattt gctgcattgc aacataaatg
    13021 gtgcagagca caatttcaag agataagttg tgcgatgcag cacgcgccct tgacgaagcg
    13081 gcggggcgca tcgcaagagc gggcatggac ggttcagctg accaagtgtc gcgcgcacgc
    13141 cgcggcttgt tgatcgttct ttcctcgccg tcgggggcgg ggaagacgac cttgtcgcgg
    13201 atgctgatgg agaccgatcc atcgataacc atgtccgtgt cggcgactac acggccgaaa
    13261 cggcccggag aagtagaggg cgccgactat aatttcgtcg acgagtccga gttcgaccgg
    13321 ctcatcgcgg cagatgagtt tgtcgagtgg gcgccggttt ttggctatcg ctatggaacg
    13381 ccgaaagccc ccgttaaagc ggcgctgaag gacggtcgcg acattctctt cgatatcgac
    13441 tggcaaggga ctcagcagct acatgccgcg atgggtgaag acctggtccg gatcttcctg
    13501 cttccgccgt cgatgtcaga gctggaggaa cggttgaaca atcgcggtac cgacagcgac
    13561 ggcgtgatcg cggaccggat ggcgagggcg gaagcggaaa tcagccactg ggccgaatat
    13621 gactatgttc tggtcaatga ggacgccagc cgctgccttg cagaaatccg gacgattgtt
    13681 gccgccgagc gattgaagcg ggcgcggcag atagggctag tcgccttcgt tcgagacctc
    13741 gtcggccctg cacactagct acctagcagc tccaggaatc gcgccgcggc aaggaaatcg
    13801 cgccgccttg cctccagcac cgcctcggcc tcttcgtcgg agccccattg ctcgcgctgc
    13861 cattgctcgt cgatggtcac ggcatcccac gcggcttcag ctgtcagtgc gccctccagc
    13921 accgcgagcg cagcaaccag cgatccgccg atcgtgatca gcggagccag gcccgccagc
    13981 cggtatggat cgttggcagc cacggcattg ccgagctgac ggagagtcgg ctcgggctgt
    14041 gggacgtgaa cgacgccgga ggtggtgcag aagtccacat cgaaccggcg ccgtgcccac
    14101 gccagcagtt ggtcccagtt cttctcctgg cgctcgacga ggcggcgcgg gccttcggcg
    14161 cgatagcagg caaggtcgct ttcgccatat ttggccagct ccgcagcgaa cgcctgcggg
    14221 tcgggcgcga tgcggtcgat tgctgcattg gcgagcccgg tcagcggcat ttcgcgcgga
    14281 tccaccatct cgccggcagc attccactca tcggcgactg cctgggccaa gtgctcgctc
    14341 ggcaccagca gcggctcccg cgccggcgtg cgaagcggct taccgcctag ctggagcgcc
    14401 cagccgccat cctcgggaac ggcggccgca gccttccaga agcgcttcac tcggaccggt
    14461 cctcgcgttc ccagtgtttc ctcagcagca tcggcgctcc caccgcatcg ataagtccga
    14521 ggacgacgag aacggcgccg acagccggcc agcctcctgg tctcagcagg ccggtgaagg
    14581 cgacggcaat gccggcgagg acggtgcaca gcccgatcag ccgggcggcc gagaagatgg
    14641 caaagcggcg cttccagagg tcctcgtcag ccatttaccg cctccgtcgc aaggcgcagc
    14701 acatcgccag gggcttcggc aaccgaacgt gcgcccgccg caaccagctc gtcggaatcg
    14761 tgatagcccc aggcggcgcc gatagccgtc gctccggcgg caacggccat cgccatgtcg
    14821 aagcttgtat cgccaatcac gacagtccga gctgcggaag cgccagcctc ggccatggcc
    14881 gcgagcgcca tttccggcga aggcttcgac gggtgccggt cggcggtctg aagtgagata
    14941 aagcgggcgt tcaggccgtg gctctcaagg cagtggcgaa gaccgcgatg cgacttgccg
    15001 gtcgccaccg caagcagcca atcgtcgctc tcgaggtcgt cgagaagctg gacgatcccg
    15061 tcgaacagcg gctcttcgac ccgtccttcc tggcgcgccc ggaagaagca gcccttgtag
    15121 gtctcggcga gcagcaggtg atcgcgctcg ggtgcatgcg gcacaagcgc cgccatcgcc
    15181 tcggtgaggc tgagcccgat gaccttccgg cagtcgcgtg cgggcggcag ctcgagccgg
    15241 tgcgtttcga aggcctcgct cagcgcccgg tagatggtgg cgccgctgtc gacgagcgtg
    15301 ccgtcgcagt cgaagatcgc gagcttggtc atcgtttcgc ccgctcgccg cgtgagcgcc
    15361 gctcgccgcg tcgagtctcg cgacggggct tggctgggcg ggctcgcctt gccggggccg
    15421 ccgcccgttc cgcctcggcc agctcgaaac cgagcatttc cagggtgtgg gcgaaatgat
    15481 ccggaagctg ggccgtgacg tcgatcttgc cgcctccggg cgaatcgatc ttcagccgcc
    15541 gtgcatggag gtggagcttg cggctaatac cgccggtcag gaaggattcg gcgccgccgt
    15601 acttgccgtc cccgacgatc gggtgaccga tagccatcat gtgggcgcgg agttggtgag
    15661 tccggccggt cagcggctga agctcgaccc aggcagcgcg attgccggcg cggtcgatga
    15721 cccgccaccg ggtcttcgcc gactggccct gttcctcgtc gacgtgcatt ttctcgccgc
    15781 cagttccggg ctgcttggcg agcggtgcgt cgatcagccc ttcgtcggcg gacggaacac
    15841 cgagcacgag cgcccagtag attttcttcg ccgtccggcc agagaaggat tttgagaaaa
    15901 aggcggcggc acgggcgctt ctcgctacca gcaggactcc ggacgtatcc ttgtcgagcc
    15961 ggtggacgag ctt
//
LOCUS       DATAKH010000020         4284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_31457,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000020 DATAKH010000000
VERSION     DATAKH010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31457"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..1893
                     /locus_tag="VHN55_00635"
     CDS             7..1893
                     /locus_tag="VHN55_00635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEX2802482.1"
                     /translation="MATARHYLTPEEAKSQAPLEAVVVRFAGDSGDGMQLTGGQFTLS
                     TALAGNDLATFPDFPAEIRAPQGTTFGVSAFQINFGSAAIDTAGDQPDVLVAMNPAAL
                     KVNADQLREGGLIIADEGEFTARNLSKAGYEQNPLEDGSLAKWQVIHFNISQLTLDAV
                     KPFGLGNKEALRCKNMWTLGLALWMFDRDRQPIVDWLKAKFAKAPELAEANIAALNAG
                     HAYGETVELGAPGIAQHHIAAAPAEPGLYRTVTGAEALALGLVAGCQLAGLKMFFGSY
                     PITPASPLLHHLARLKEFGITTFQAEDEIAAICAAIGASYAGQLGITSSSGPGIALKT
                     EALGLAVMTELPLVVVNSQRGGPSTGLPTKTEQSDLYQAVYGRNADSPLPVIAARSPA
                     DAFDCAIEAVRIATRYMVPVMLLTDGYIANAAEPWRVPDMSGYQPFPVSYFDSAPGEG
                     QAVMPYARNADLARPWIRPGTAGLEHRIGGIEKQPGTGNIDYSPGAHEEMTLERANKV
                     LGVADTIPEQDVCLGNDSGKLAVVGWGSTFGPIHQAVRRARNRGLDVSHIHIRHIWPM
                     PENMSVLLKGFEHILVPEMNMGQLKTLLRDQFLVDARPLPKVAGQPFRIAEIEAAIDE
                     ALKT"
     gene            2026..3042
                     /locus_tag="VHN55_00640"
     CDS             2026..3042
                     /locus_tag="VHN55_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEX2802483.1"
                     /translation="MNEMTTVTTAKDWASDQEVRWCPGCGDYAVLKAVQRTMPDLGVA
                     RENTVFISGIGCSSRFPYYMATYGFHTIHGRAPAVATGVKLANPELDVWIITGDGDAL
                     SIGGNHTMYVLRRNLDCQILLFNNEIYGLTKGQYSPTSRLGTRSPSTPFGSIDRPITP
                     CMFALGSGARFIARGIDVHKNLPDVLKAAHAHRGASFVEIYQNCIVYNDEVFGSFTEK
                     QNAAAKQLWLQAGEKMLFDGGARGLALDVDTLTLKMVDGDDPSVIVHNPKNRGIAAML
                     IEMRQDEGFPVALGVIYEDPRPTFESAVIDQNAAAAEGKAPDLQKLVAKGQTWMVEKE
                     PREL"
     gene            3060..4016
                     /locus_tag="VHN55_00645"
     CDS             3060..4016
                     /locus_tag="VHN55_00645"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEX2802484.1"
                     /translation="MDNITHTLAGGLLGQMGLKRQSRFAMAACLLGASAPDIDVFAPL
                     ILPVDGIAFHRGPTHAVFAVPVLAAALTALLWLLHRLWPRPGKAAEFRPAALFAVALI
                     AIASHPFLDWLTTYAIAIFSPVSSRWYSGNAIFIIDWVYWLLMIGGIAGSWWRSRRQR
                     ANPGQPARIAGLLLVAYIGFNLGESSAIERATAAALRRQGIEAELVVASPPPFAFWRR
                     SIAWRSADRWGSGTYDLANGLRLDPVSYPLGLDDPRLARAIRNRRYVRSFLTWSRMPI
                     VVQEDGRTYLSDQRFYGQLRSRVVPAKVRSFFRRNAFVVPLD"
     gene            4095..4284
                     /locus_tag="VHN55_00650"
                     /pseudo
     CDS             4095..4284
                     /locus_tag="VHN55_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978911.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
BASE COUNT          749 a         1447 c         1340 g          748 t
ORIGIN      
        1 gtccctttgg ctacggccag acattatctt accccggaag aagcgaaatc ccaggcaccg
       61 ctcgaagcgg tggtggtgcg gttcgcgggc gattccggcg acggcatgca gctgaccggc
      121 gggcagttca ccctctcgac cgcactcgcc ggcaacgacc ttgctacctt ccccgatttt
      181 cctgcggaaa tccgcgctcc gcaggggacg accttcgggg tctccgcctt ccagatcaat
      241 ttcggctcgg ccgcgatcga caccgccggc gaccagccgg acgttctggt ggcgatgaac
      301 ccggcggcgc tgaaggtgaa cgccgaccag cttcgcgagg gtgggctgat catcgccgac
      361 gagggcgagt tcaccgcgcg caacctcagc aaggccggct acgaacagaa cccgctcgag
      421 gacggaagcc tggcgaaatg gcaggtgatc cacttcaaca tctcgcagct caccctcgac
      481 gcggtgaagc cgttcggcct cggcaacaag gaagcgctcc gctgcaagaa catgtggacg
      541 ctggggctgg cgctgtggat gttcgaccgc gaccgccagc cgatcgtcga ctggctcaag
      601 gccaagttcg ccaaggcgcc ggagctcgcc gaggccaata tcgcggcgtt gaacgcaggc
      661 catgcctatg gcgaaacggt cgagcttggc gcgcccggaa tagcccagca ccacatcgcc
      721 gccgcccccg ccgagcccgg tctctaccgc accgtcacgg gcgcggaagc gcttgctctc
      781 ggccttgttg ccggctgcca gcttgcgggt ttgaagatgt ttttcggttc ctacccgatt
      841 acgcctgcaa gcccgcttct ccaccatctg gcccggctga aggagttcgg gatcaccacc
      901 ttccaggccg aggacgagat cgccgccatc tgcgccgcga tcggtgcttc ctacgccggc
      961 cagctcggga tcacctcgtc gtccggtccc gggatcgccc tcaagaccga ggcgctcggc
     1021 cttgcggtga tgaccgagct tccgctcgtc gtcgtcaact cgcagcgtgg cggtccgtcg
     1081 acgggtcttc cgaccaagac cgagcagtcg gacctctacc aggccgttta tggccgcaat
     1141 gcggattcgc cgcttccggt aatcgccgcc cgctcgcccg ccgatgcgtt cgattgcgcg
     1201 atcgaggcgg ttcggatcgc cacccgctac atggtgccgg tgatgcttct gaccgacggc
     1261 tatattgcca atgccgcgga gccgtggcga gtgcccgaca tgagcggcta tcagccgttt
     1321 ccggtaagct atttcgacag cgctccgggc gagggccagg cggtaatgcc ctacgcccgc
     1381 aacgccgacc tggcgcggcc gtggatcagg cccggcactg cgggcctcga gcaccgaatc
     1441 ggcgggatcg agaagcagcc cggaaccggc aacatcgact atagccccgg agcgcatgag
     1501 gagatgaccc tcgaacgcgc aaacaaggtg ctgggcgtcg ccgacaccat tcccgagcag
     1561 gacgtgtgcc tcggcaacga cagcggcaag ctggctgtag tcggctgggg atctaccttc
     1621 ggcccgatcc accaggcggt ccgccgtgcc cgcaatcgcg ggctcgacgt cagccacatc
     1681 cacatccgcc acatctggcc gatgcccgaa aatatgtctg tcctactcaa gggcttcgag
     1741 catatcctcg tccccgagat gaacatgggc cagctcaaga ctctgcttcg cgaccagttc
     1801 ctggtcgacg ccaggccgct gccgaaggtc gccggccagc cgttccggat cgcggagatc
     1861 gaggctgcaa tcgacgaggc cttaaagaca tgaaaatggt cgctcatcgc gtgactttag
     1921 tgactttaag cgagtgctcg cagtgaaaca gatcaacgtt ttcccgatgc tggcgatgct
     1981 gatcatcgtc gtgctcctga tcgcctggct cggcgggtat ctgtcatgaa cgagatgacg
     2041 accgtcacca ccgcgaagga ttgggcaagc gaccaggaag tccgctggtg cccaggctgc
     2101 ggcgactatg cggtattgaa agccgttcag cggacgatgc cggacctcgg agtcgcgcgc
     2161 gagaacacgg tgttcatctc gggaatcggc tgctcgagcc gcttccctta ttacatggcg
     2221 acttacggct tccacacgat ccacggccgc gctccggcgg tcgcgaccgg agtgaagctt
     2281 gctaaccccg agctcgacgt gtggatcatc accggcgacg gcgatgcatt gagcatcggc
     2341 ggcaaccaca cgatgtatgt ccttcgccgc aacctcgact gccagatcct gctgttcaac
     2401 aacgagatct acggcctgac caaggggcaa tattcgccga ccagccggct cggcacgcgc
     2461 tcgccgtcga ccccgttcgg ctcgatcgac cggccgatca cgccgtgcat gttcgcattg
     2521 ggctccggag cccgcttcat cgcccgcggg attgacgtcc acaagaacct gcccgacgtg
     2581 ctcaaggcag cccacgccca caggggcgcg agcttcgtcg aaatctacca gaattgcatc
     2641 gtctacaatg acgaggtgtt cggctccttc accgagaagc agaatgcggc ggcgaagcag
     2701 ctgtggttgc aggccggcga gaagatgctg ttcgacgggg gcgccagggg actcgcgctc
     2761 gatgtcgaca cgttgacctt aaaaatggtc gacggcgacg atccgtcggt catcgtccac
     2821 aacccgaaga accgcgggat cgccgcgatg ctgatcgaga tgcggcagga cgaaggcttc
     2881 cctgtcgctc tcggagtcat ctacgaggac ccgcgcccga ccttcgaaag cgctgtgatc
     2941 gaccagaatg cggccgcggc cgaaggcaag gcgcccgacc tccagaagct ggtcgccaag
     3001 ggccagacct ggatggtcga gaaggaaccg cgcgagctct gagcaccggc gtctcctgat
     3061 tggacaatat cacccacacc ctggccggag gcctgctcgg ccagatgggg ctgaagcgcc
     3121 agtcgcgttt cgcgatggct gcctgcctgc tcggcgccag cgctccggac atcgacgtct
     3181 tcgctccgct gatcctgccg gtcgacggga tcgccttcca tcgcgggccg acccacgccg
     3241 tcttcgcggt gccggtcctc gccgccgcac tcaccgcctt gctttggctc ctgcatcgac
     3301 tgtggccgcg gccgggcaaa gccgcggagt tccggcccgc cgcgctattc gcggtcgcgc
     3361 tgatcgctat cgccagccat ccgtttctcg actggctgac aacctacgcg atcgcgattt
     3421 tctcgccggt cagctcgcgc tggtattcgg gcaatgcgat cttcatcatc gactgggtct
     3481 actggctgct gatgatcggc ggcatcgccg gcagctggtg gcgatcccgc aggcagaggg
     3541 ccaacccggg ccagccggcg cggatcgcag ggctgctcct cgtcgcttat atcgggttca
     3601 acctcggcga gagctcggcg attgagcgag ccaccgctgc ggcgcttcgg cggcagggga
     3661 tcgaggctga gctcgtcgtc gccagcccgc cgcctttcgc cttctggcgc cggagcatcg
     3721 cctggcgaag cgccgaccgc tggggaagcg gcacctatga tctggcgaac gggctgaggc
     3781 tggacccagt cagctacccg ctcgggctcg acgaccccag gcttgcccgc gccatccgca
     3841 acaggcgtta cgtgcgctcg ttcctcacct ggtcacgaat gccgatcgtc gtccaagagg
     3901 acggccgaac ctatctcagc gaccagcgct tctacggcca attgagatcg cgggtagttc
     3961 cggcaaaggt gcggagcttc ttccgcagga acgctttcgt cgttcccctg gattaggaat
     4021 cgactcggac gagctcgccg gtcgcgctgt cggagatgag gcggtcgacg atgaagtcgg
     4081 cgatgacctg cggcggcttc acctcgtccg tcgggcatga gcctcgcgcc ttctggggcg
     4141 cctacggctc gtccaaggcc gcgctcgaga atttggtcct cacctacggc gatgagaccg
     4201 cccatgccgg caagatccgg gtccatgtcg tcgaccctgg agcgacccga acccggatgc
     4261 gcgaactagc cttccccggc gagg
//
LOCUS       DATAKH010000021         3062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_16065,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000021 DATAKH010000000
VERSION     DATAKH010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16065"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1203
                     /locus_tag="VHN55_00655"
     CDS             <1..1203
                     /locus_tag="VHN55_00655"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2802485.1"
                     /translation="LFGTVGNDVLDGLAGADQMTGGSGNDTYYVDDVGDLIFEQLNGG
                     ADLIYSSVSYKIGANVENLTLTGTDSIRGTGSNLDNVITGNSGDNVLDGRVGADTMIG
                     AAGNDTYVVDNAGDVVVENADEGIDTVNSSLSHTLGANVENLVLTGTASINGTGNGLA
                     NVITGNSGNNVIDGGAGADRLIGGAGNDTYYVDNSADVVVEKAAGGIDLVYASSIYTL
                     KLNIENLVLTGSTSIDGTGNESDNFILGNSTRNYLTGGAGADLLAGGLGNDVLKGGAG
                     ADAFLFDTTLGSANVDTIKDFVSGEDTIVLDQSIFSALSEGALSASAFHLGTKAQDTD
                     DRILYDQATGRIFYDADGSGGGAKVLFAQLTAGTVLTSDDFSVVDHGDIPSPTDLSGV
                     WHDHFFFV"
     gene            1320..1412
                     /locus_tag="VHN55_00660"
     tRNA            1320..1412
                     /locus_tag="VHN55_00660"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1354..1356,aa:Ser,seq:gct)
     gene            1629..1910
                     /locus_tag="VHN55_00665"
     CDS             1629..1910
                     /locus_tag="VHN55_00665"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2802486.1"
                     /translation="MKANSDLSGCINAGRERRVTLNCAAVVTESDGCTVDVTLIDVSK
                     HGFRLRSVAELEIGSTILLQMPEARPVRCEIRWACGHEAGGAFLDPITL"
     gene            complement(1917..>3062)
                     /locus_tag="VHN55_00670"
     CDS             complement(1917..>3062)
                     /locus_tag="VHN55_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127564.1"
                     /note="catalyzes the conversion of salicylyl-CoA to
                     gentisyl-CoA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional salicylyl-CoA
                     5-hydroxylase/oxidoreductase"
                     /protein_id="HEX2802487.1"
                     /translation="DGKTNKTAPPMFAPFRMREMTVENRVTVSPMAMYSAVDGVPNDF
                     HFVHYGERALGGAGLLFTEMTCVSPEGRISPGCTGMWNADHVAAWKRIVDFVHSNSKA
                     KICLQLGHSGAKGSTRVGWEEDNAPLDAGNWPVMAASDVPWSSANQLPRPMTRADMDA
                     VRDQFVAAVKMGIACGFDMVELHAAHGYLLSGFLTPLQNKRTDEYGGSLQNRLRYPLE
                     VFRAMREAWPNEKPMSVRISATDWAGDQGITPDEAVEIGEAFAREGADLIDVSAGQTW
                     TGAQPVYGRMFQTPFSDKLRNEAKLATMAVGNIYEPDHANSILAAGRADLVALARPHL
                     IDPFWTLRAAAALDYRDIHVPPQYLNGQAQLARNLKREAEAAAALRV"
BASE COUNT          561 a          968 c          996 g          537 t
ORIGIN      
        1 ctgttcggca ccgtcggcaa cgacgtcctg gacggcctgg ccggagccga ccagatgact
       61 ggaggctccg gcaacgacac ctactacgtc gacgatgtcg gcgacctgat cttcgagcag
      121 ctcaacggag gcgccgacct catctactcg agcgtcagct acaagatcgg cgcgaatgtc
      181 gaaaacctga cgcttaccgg aacagactcg atcaggggca cgggcagcaa cctcgacaat
      241 gtcatcaccg gcaatagcgg cgacaatgtc ctggacggac gcgtcggcgc tgacaccatg
      301 atcggcgccg ccggcaacga cacgtatgtc gtggacaacg cgggcgacgt ggtcgtcgaa
      361 aatgccgacg agggcatcga caccgtcaac tcgagcctga gccacacgct aggcgcgaac
      421 gtcgagaatc tcgtgctgac ggggacggct tcgatcaatg gcacgggcaa cggcctggcc
      481 aacgtcatta ccggcaatag cgggaataac gtcatcgacg gcggagccgg agccgaccga
      541 ctgatcggcg gtgccggaaa cgacacttat tacgtcgata acagcgccga cgttgtcgtc
      601 gaaaaggcgg caggcggcat cgatctcgtc tatgcgagct ccatctacac gctcaagctc
      661 aacatcgaga acctggtgct gactggcagc acttcgatcg atggcacagg caacgaatcg
      721 gacaatttca tcctcggcaa cagcacacgc aactacttga cgggtggcgc cggggccgac
      781 ctgctcgccg gcgggctggg caacgacgtg ctcaagggcg gtgcaggggc cgacgccttc
      841 ctgttcgaca cgacgcttgg ttcggcgaac gtcgacacga tcaaggactt cgtttccggc
      901 gaagatacta tcgtgctcga ccagtcgatc ttttccgcgc tttcggaagg ggcgctgagt
      961 gcttctgctt tccaccttgg cacaaaggcg caggataccg atgaccggat cctctatgac
     1021 caggccaccg gcaggatctt ctacgatgcc gacggtagcg ggggtggcgc gaaggttctg
     1081 ttcgcgcagt tgaccgcagg gacggttcta accagcgacg acttcagcgt cgttgaccat
     1141 ggcgacatcc cgagcccaac tgatctgtcg ggcgtttggc acgaccattt cttcttcgtc
     1201 tgagccctcg ccgggcgaat cggaacggtg atcgcactga ttgccgttcc ctttcgcccg
     1261 agcggttggt tgatacggcg aaaagcgccc tatatagccc ccggctccca agccgctgcg
     1321 gagacgtggg tgagtggctg aaaccagcgg tttgctaaac cgccgtacgg ggtattcccg
     1381 taccgagggt tcgaatccct ccgtctccgc cacttttgct tcggccgcat tcagcccagc
     1441 cagcgaaact cggtaaaggc gttttcaacc cttttcattt ccgagccggt aaacccgctc
     1501 gcgttaacga ggtggcggac gacccgacgg agccgagtgg acgcgactcc ctgaaggacg
     1561 atctgcgccg agcgaatggc cggccggctc gactcgtccg ctgccgatgt tcggcagggg
     1621 ggaagaagat gaaggcgaac agcgatcttt cgggatgcat caacgccggc cgcgagcggc
     1681 gggtgacgct caattgcgcg gcggtcgtga ccgagtccga cgggtgcacc gtcgacgtga
     1741 cgctgatcga cgtgtcgaag cacggcttcc ggctgcgctc ggtcgcggag ctggagatcg
     1801 gctcgaccat cctgctgcag atgccggaag cgcggcccgt gcggtgcgag attcgctggg
     1861 catgcggcca cgaagccggc ggcgccttcc tcgatccgat cactctctga caggcttcac
     1921 acgcgcaagg ccgcggcggc ttcggcctcg cgcttcaaat tgcgggcgag ctgcgcctgg
     1981 ccgttgaggt actgcggcgg aacgtggatg tcgcggtagt cgagcgcggc tgcggcgcgc
     2041 agggtccaga acgggtcgat caggtgcggg cgggcgagcg cgacgaggtc tgcccggccc
     2101 gccgcgagga tcgaattggc atggtcgggc tcatagatgt tgcccaccgc catcgtcgcc
     2161 agcttcgcct cgttgcggag cttgtcggag aagggcgtct ggaacatccg gccgtagacc
     2221 ggctgcgccc cggtccaggt ctggcccgcc gaaacgtcga tcaggtcggc gccttcgcgg
     2281 gcgaaggcct cgccgatctc gacggcctcg tccggagtga ttccctggtc gcccgcccag
     2341 tcggtcgccg aaatgcggac cgacatcggc ttttcgttcg gccaggcttc gcgcatcgcg
     2401 cggaacactt cgagcggata gcggaggcga ttctggaggc tgccgccata ttcgtcggtc
     2461 cgcttgttct gcagcggggt caggaagcct gagagcagat agccgtgggc ggcgtggagc
     2521 tcgaccatgt cgaagccgca cgcgatgccc atcttcaccg ccgcgacgaa ctgatcgcgc
     2581 accgcgtcca tgtcggcccg ggtcatcggc cggggcagct ggttggcgct cgaccacggc
     2641 acgtcggacg ccgccatcac cggccaattg cccgcgtcga gcggggcatt gtcctcttcc
     2701 cagccgacgc gagtggagcc cttcgccccg gagtggccga gctgaaggca gattttcgct
     2761 ttggaattgg aatggacgaa atcgacgatc cgcttccatg cggcgacgtg atcggcgttc
     2821 cacatgccgg tgcagccggg actgatccgc ccttccggcg acacgcaggt catctcggtg
     2881 aacagcagcc cggcgccgcc tagagcgcgc tcgccgtaat ggacgaaatg gaagtcgttc
     2941 ggcacgccgt cgaccgccga atacatggcc atcggcgaaa ccgtgacgcg gttctcaacc
     3001 gtcatctcgc gcatcctgaa aggagcgaac atcggcggcg cggtcttatt ggtcttgccg
     3061 tc
//
LOCUS       DATAKH010000022         9404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_524,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000022 DATAKH010000000
VERSION     DATAKH010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9404
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_524"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VHN55_00675"
     CDS             <1..294
                     /locus_tag="VHN55_00675"
                     /inference="COORDINATES: protein motif:HMM:NF028171.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2802488.1"
                     /translation="PAVTHVDNSARIQTVHRDTNPLYHRLISRFAELTGCPVLVNTSF
                     NVRGEPIVCTPADAFRCFMATDIDMLVIGNCLLGKADQDPALRDEYYERYELD"
     gene            281..1390
                     /locus_tag="VHN55_00680"
     CDS             281..1390
                     /locus_tag="VHN55_00680"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEX2802489.1"
                     /translation="MSWTRKLAFLAIIWSVALAVLLAGAEIFLRLTDGGWGSTLRLNL
                     VRSRTYEYRVSNLYDWNSPTVRYVRDEYGLRDDCASPADIDILTVGGSTTDQRFLAQE
                     ATYQAVMQRDLAQAAGRDICVSNAGIDGHSTHGHLRAFRDWFPLIPGLEPKLFVFYIG
                     INDADFTRAGPGDFETKVGAGYGNPIRRFHVVQLGLWVRDTLDSLLGTRPAHGGHSRV
                     DWRTADFPQERLAADTPERAARNAAAFRKRLQQMLHYARADGAEVLCVTQPHRMVRSV
                     DGRKRGVEPYFGGESGHPAYGGLDYDYSLRQLNRAMRDECGERRLVDLYGTDFNDGDF
                     FDYAHNTPSGARKVGDRIARFIERSDLMDELRTGP"
     gene            complement(1440..1961)
                     /locus_tag="VHN55_00685"
     CDS             complement(1440..1961)
                     /locus_tag="VHN55_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEX2802490.1"
                     /translation="MRSAFDFSPYRRSAVGFDRLFDMLENSSLGNGGENYPPFDLIRT
                     GEHDYRIELAVAGFKPDEIDITAQQNVLVVSGRKKEESGEEGSDYIYRGIATRSFERR
                     FALADHIQVRGADMKDGLLSIELVREIPEAMKPKKIEIGGGSEKRERSAIGGGEEPAS
                     KQTLDAKPERESA"
     gene            2269..4251
                     /gene="parE"
                     /locus_tag="VHN55_00690"
     CDS             2269..4251
                     /gene="parE"
                     /locus_tag="VHN55_00690"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006959942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEX2802491.1"
                     /translation="MSDLFSSSSAPTSSDNYDAASIEVLEGLEPVRRRPGMYIGGTDA
                     RALHHLAAEVIDNAMDEAVAGHASRIEVTLEPGNRLTVTDNGRGIPVEEHPRFPGKSA
                     LEVIMTTLHSGGKFEGKAYSTSGGLHGVGVSVVNALSTETIVEVARERVLYRQSFAKG
                     LATSKLEEVGATSNRRGTTVAFTPDPEIFGADAKFSPDRLYKLARSKAYLFAGVEIRW
                     HCDPALAGDSVPAEAVFQFPGGLADHLREQLGERPCVTAEPFTGRQDFPDNQGSAEWA
                     VAWPLYSDGAQSYYCNTIPTPDGGTHEAGLRAALTKGIRAFGELVGDKKAKNITADDV
                     FNGIELMLSVFIRNPHFQSQTKDRLTSLEAARFVEAAVRDHFDHYLADNMDRGRALLG
                     SIVERMDERLKRRAEREVQRKTATSARKLRLPGKLTDCANDDPKGTELFIVEGDSAGG
                     SAKQARDRKTQAILPIRGKILNVASATQDKIRANSEIADLQLALGCGVRDKFDEDSLR
                     YERIIIMTDADVDGAHIATLLMTFFFQEMPELVQRRHLFLAQPPLYRLSSGAKTLYAR
                     DDAHRAELEATEFKGKKVEVSRFKGLGEMNPNQLKQTTMSPATRSLIEITLPAQYEER
                     HAARDIVDRLMGRDPAKRFEFIQSRASALDEDEIDA"
     gene            complement(4260..4475)
                     /locus_tag="VHN55_00695"
     CDS             complement(4260..4475)
                     /locus_tag="VHN55_00695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802492.1"
                     /translation="MRDTSFLLALCGMVFLAVAALAWFRIIRKPDEQPPTKKDDRRSE
                     LAAKVVVVAFGLSAVAAVIAIAGWIWR"
     gene            complement(4468..5493)
                     /locus_tag="VHN55_00700"
     CDS             complement(4468..5493)
                     /locus_tag="VHN55_00700"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phosphoacceptor
                     domain -containing protein"
                     /protein_id="HEX2802493.1"
                     /translation="MPEPFLVLDDTLHLLAGSRCFYVVYGEDPLKAPGTSLFDLSGGQ
                     WDIPGLRQLLKSVVDTRESVNGFEFEQDFAKVGIRTVQLNALPLRDESGTSRMVLLAI
                     KDISERRAAEQEKQRLLEHTEELLEQQKTLLREMRHRIANSLQIIASILLLKAGSVAS
                     EETKNELRAAHQRVMSVAAVQSHLQASDGIERIEMGPYLTKLSAGLAASMIDPRQDVE
                     ISVEAGAGALPSSDAVSLGLIVTELIINAIKYAFPQSRSSAHVRVRFEMARSDWKLTV
                     SDNGTGRLEKVEESESSGLGTVLVAALAKQLKAQIVEKSSAKGLEIAVTKATFQPSVE
                     RAVAVNA"
     gene            complement(5722..5913)
                     /locus_tag="VHN55_00705"
     CDS             complement(5722..5913)
                     /locus_tag="VHN55_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802494.1"
                     /translation="MSGENWHEERDRLVKLLADIESGKVTHIDQDQLRELQATNPKAI
                     EMVKARLAKLNVRLGDRHS"
     gene            6192..6479
                     /locus_tag="VHN55_00710"
                     /pseudo
     CDS             6192..6479
                     /locus_tag="VHN55_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683963.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
     gene            6542..6940
                     /locus_tag="VHN55_00715"
     CDS             6542..6940
                     /locus_tag="VHN55_00715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802495.1"
                     /translation="MAIRIAGAAVFLLAGCTVVDDSAVPESPDIQRLEKQLAQHPCVG
                     GLDGWQRNYRFSRKTGLFSPYSLSPDLDVIEFHLRRARTVTIAPGLNVLPPEAGGNWP
                     DSQAIQTVDGRYRLTDGSLKLAPCNAVPGN"
     gene            complement(6941..8548)
                     /gene="ybaL"
                     /locus_tag="VHN55_00720"
     CDS             complement(6941..8548)
                     /gene="ybaL"
                     /locus_tag="VHN55_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008833586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaL family putative K(+) efflux transporter"
                     /protein_id="HEX2802496.1"
                     /translation="MPHHTPLIGTIVAGLVAAFVLGAIAHRLKVSPIAGYLLAGVLVG
                     PFTPGFVADGNLAAELAEIGVILLMFGVGLHFSLRDLLSVRKIALPGAAVQIAVATSM
                     GMILAEVLGWGLLSGLVFGMSLSVASTVVLLRALESRNLLNTDRGRIAVGWLIVEDLA
                     TVLALVLLPAIAVAATSADDGATSIGMSFSVTLVKIVGFVAFMLIVGKRVIPWALHWV
                     VHTGSRELFRLAVLSIALGVAFGAALVFDVSFALGAFFAGMILGETQLSRRATEETLP
                     LRDAFAVLFFVSVGMLFDPAVLLEQPLPLLATVSIIIVGKSVAAYAIVKAFRYDNQTA
                     ITVSASLAQIGEFSFILANLGTDLNILPAAARDLILAGAIISILLHPLIFGLAAKRVR
                     RAAEASEVEAPSENIIVVGYGRVGKLVSRRLRSARRNFVLIDDQFDVVELARQAGVET
                     VRGNAASREILIDAGIERASHLLIAIPEGFEAGGIAEVARKLNPGISIIARAHSAEEV
                     QHLKDHGANRVIMGEDEIARQMIAASA"
     gene            9057..9404
                     /locus_tag="VHN55_00725"
                     /pseudo
     CDS             9057..9404
                     /locus_tag="VHN55_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020818613.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
BASE COUNT         1762 a         3214 c         2832 g         1596 t
ORIGIN      
        1 ccggcagtca ctcacgtcga caatagcgcc cggatccaaa ccgtgcaccg ggacaccaac
       61 ccgctctacc acaggctcat cagccgcttc gcggagctga ccggctgccc ggttctggtc
      121 aacacgtcgt tcaacgtccg cggcgagcca atcgtctgca cgcccgcgga cgccttccgc
      181 tgcttcatgg cgaccgacat cgacatgctc gtaatcggca attgcctgct tgggaaagcc
      241 gatcaggacc cggcgctccg cgatgaatat tacgagcgct atgagctgga ctaggaagct
      301 cgctttcctg gcgatcattt ggtcggttgc gcttgccgtc ctgctcgccg gggccgagat
      361 cttcctccgg ctgacggatg gcggctgggg cagcacgctg cgcctgaacc tcgtccgcag
      421 ccgcacctac gaataccggg tttccaacct ttacgactgg aacagcccga ccgtccgcta
      481 tgtgcgcgac gaatatggcc tccgcgacga ctgcgcttcg cccgccgata tcgacatcct
      541 gacggtcggg ggttcgacca ccgaccagcg gttcctcgcc caggaggcca cctaccaggc
      601 ggtgatgcaa agggacctgg cacaggcggc gggccgcgac atctgcgtca gcaacgcggg
      661 gatcgacggc cacagcaccc atggccatct tcgagctttc cgcgactggt tcccattgat
      721 ccccggcctc gagccgaagc tgttcgtctt ctatatcggc atcaacgacg ccgacttcac
      781 ccgcgccggt ccgggcgatt tcgaaaccaa ggtgggggcg ggatacggaa atcccatcag
      841 gcggttccac gtggttcagc tgggcctgtg ggttcgcgac acactcgata gcctgttggg
      901 aaccaggccg gcgcatggcg gtcacagccg cgtcgactgg cggaccgccg attttccgca
      961 ggaaaggctg gcggccgaca cccccgagcg cgcagcccgc aacgccgccg cctttcgcaa
     1021 gcggcttcag cagatgctgc actatgcccg cgccgacggc gccgaagtcc tgtgcgtcac
     1081 ccagccgcac cggatggtcc ggtcggtcga tggccggaag cgcggcgtcg agccctattt
     1141 cggcggcgag tccgggcatc cggcctatgg cggcctcgac tatgattatt cgcttcggca
     1201 gctgaaccgg gcgatgcgcg acgaatgcgg agagcgtcgc ctggtcgacc tgtacggcac
     1261 ggatttcaac gacggcgatt tcttcgatta cgcccacaac acgccgagcg gcgcccgcaa
     1321 ggtcggcgac cggatcgccc gtttcatcga gcgatcggac ctgatggacg agcttcgaac
     1381 cggcccttga aaaaagcccc ggaggagacc cccccggggc ttgtcacgcc tgtactgcct
     1441 taagcgctct cgcgctccgg ctttgcgtcg agcgtctgct tcgatgccgg ctcctcgccg
     1501 ccaccgatcg ccgaccgctc acgcttttcg gagccgccgc cgatctcgat cttctttggc
     1561 ttcatcgcct cggggatttc gcggaccagc tcgatcgaca gaaggccgtc cttcatgtca
     1621 gcaccgcgga cctggatatg gtcggcaagc gcgaaccgcc gctcgaacga gcgggtcgcg
     1681 atcccgcggt agatgtagtc ggagccctct tcgccggact cctccttctt ccttccgctg
     1741 acgaccagca cgttctgctg ggcggtgatg tcgatctcgt ccggcttgaa cccggccacc
     1801 gcgagttcga tccggtagtc gtgctcaccg gtcctgatca ggtcgaacgg cggataattc
     1861 tcgccgccgt ttccaaggct gctgttctcg agcatgtcga acagccggtc gaatccgacc
     1921 gcggaacggc gatagggtga aaagtcgaaa gcactacgca tgtcttgtcc tccttcttga
     1981 gcaacaaggc ggagctagag cctccgagcg cagcgacgcc ggcgcaccgc gccgccggag
     2041 cagcgcgaag agctggcgag agccggccag cctgcccgcg aagcgggaca ggactgacgt
     2101 cacgggattc attcccgtga cggcccgggt tcacagcccc gtcaccgggc ccgtttggcg
     2161 cccggcacgc gaaaattttg gaactgcagt ttgcgatttc aagactgtgg aaaacaccta
     2221 atcgcccagt tggcacggct cgaaacgcgg ccctatagcg ttcctgtaat gtccgatctg
     2281 ttttcctctt cgtcagcacc cacttcgtcc gataattacg acgccgcctc gatcgaggtt
     2341 ctggaggggc tggagccggt ccgccgccgc cccggaatgt acatcggcgg caccgacgcg
     2401 cgcgccctcc accacctcgc cgccgaggtc atcgacaatg cgatggacga ggcggtcgcc
     2461 ggccacgcgt cgcgcatcga ggtcacgctc gagcccggca accgcctcac cgtaaccgac
     2521 aacggccgcg ggatcccggt cgaggagcac ccccgcttcc ccggcaagtc ggcgctggag
     2581 gtcatcatga ccacgctcca ctcgggcggg aagttcgagg gcaaggcgta cagcacctcc
     2641 ggcggcctcc acggagtcgg ggtcagcgtc gtcaacgcgc tctcgaccga gacgatcgtg
     2701 gaggtcgccc gcgagcgtgt cctctaccgc cagagcttcg cgaagggcct cgccacctcc
     2761 aagctcgaag aagtcggcgc cacatccaac cgccgcggca ccaccgtcgc cttcacgccg
     2821 gacccggaaa tcttcggcgc cgacgcgaag ttcagccccg atcgcctcta caagctcgcc
     2881 cgctccaagg cctatctctt cgccggcgtc gaaatccgct ggcactgcga tcccgccctc
     2941 gccggcgaca gcgtgcccgc cgaggccgtc ttccaattcc ctggcggcct cgccgaccac
     3001 ctccgcgagc agctcggcga gcgcccctgc gtcaccgccg agcctttcac cggccgccag
     3061 gacttccccg acaatcaggg cagcgccgaa tgggcggtcg cctggccgct ctattccgac
     3121 ggcgcgcaaa gctattactg caacaccatc cccacgcccg acggcggcac ccacgaggcg
     3181 ggcttacgcg ccgcgctcac caagggcatc cgcgcgttcg gcgagctggt cggcgacaaa
     3241 aaggcgaaga acatcaccgc cgacgatgtc ttcaacggca tcgagctgat gctcagcgtc
     3301 ttcattcgca acccgcattt ccagagccag accaaggacc gcctgaccag cctcgaggcc
     3361 gcgcgcttcg tcgaggccgc cgtccgcgac catttcgacc attatctcgc cgacaacatg
     3421 gaccgcggcc gcgcgctcct gggatcgatc gtcgagcgca tggacgagcg cctgaagcgc
     3481 cgcgccgagc gcgaggtgca gcgcaagacc gccaccagcg cccgcaagct ccgcctcccg
     3541 ggcaagctca ccgattgcgc caacgacgac cccaagggca ccgaattgtt catcgtcgaa
     3601 ggcgacagcg ccggcggctc ggcaaagcag gcgcgcgata ggaaaacgca ggcaatcctg
     3661 cctatccgcg gcaagatcct caacgtcgcc tcggccactc aggacaagat ccgcgcaaac
     3721 agcgagatcg ccgacctcca gctcgccttg ggctgcggcg tccgcgacaa gttcgacgag
     3781 gattcgctcc gctacgagcg catcatcatc atgaccgacg ccgacgtcga cggcgcccac
     3841 atcgccacgc ttctgatgac cttcttcttc caggaaatgc ccgagctggt gcagcgccgg
     3901 cacctgttcc tcgcccagcc cccgctctac cgcctctcaa gcggcgccaa gaccctctac
     3961 gcccgcgacg acgcccaccg cgccgagctc gaagccaccg agttcaaggg caagaaggtc
     4021 gaagtcagcc gcttcaaggg cctcggcgaa atgaacccga accagctcaa acagaccacc
     4081 atgagcccgg cgacccgcag cctcatcgag atcacgcttc ccgcgcagta cgaggagcgc
     4141 cacgccgcga gggacatcgt cgaccgcctc atggggcgcg acccggcgaa acggtttgag
     4201 ttcatccaga gtcgcgccag cgcactcgac gaggacgaga tcgacgcctg atcggcggct
     4261 tacctccaga tccacccggc gattgcgatg accgcggcga cggcgctcag gccgaaagcg
     4321 accacgacca ccttggccgc caattcggag cgccggtcgt ccttctttgt cggcggctgc
     4381 tcgtccggtt tgcggatgat ccggaaccac gccagcgcgg ccacggcgag gaacaccatc
     4441 ccgcaaagcg ccagcaggaa gctggtatca cgcattgacc gccaccgcgc gctccacgct
     4501 cggctggaag gtcgccttcg tgacggcgat ctcaaggccc ttggctgacg atttctcgac
     4561 gatctgcgcc ttcagctgct tggccagcgc ggccaccagg actgtgccga ggccgctgga
     4621 ctcgctttcc tccacctttt cgagcctgcc ggtcccgttg tccgaaaccg tcagcttcca
     4681 gtccgacctt gccatttcga acctcacccg gacgtgagcg gaggagcggc tttgcgggaa
     4741 cgcatatttg atggcgttga tgatcagctc ggtgacgatc agcccgaggc tgacagcatc
     4801 gctggacgga agtgctccag cccccgcctc gacgctgatc tcgacgtcct gccgggggtc
     4861 gatcatcgaa gccgccagcc cggcgctcag cttcgtcaga tagggaccca tctcgatccg
     4921 ctcgattccg tccgaagcct gcaagtggct ctgcaccgcc gccaccgaca tcaccctctg
     4981 gtgcgccgct cgaagctcgt tcttggtttc ctcggacgcg accgagccgg ccttgagcag
     5041 caggatgctg gcgataatct gcaggctgtt ggcgatccgg tgccgcattt cgcgaaggag
     5101 cgtcttctgc tgctccagca gctcctcggt atgctccagg agccgctgct tctcctgctc
     5161 ggcggcgcgg cgctcgctga tgtccttgat cgcaagcagc accatccggc tggtcccgct
     5221 ttcgtcgcgt aagggcagcg cgttgagctg gacggtccgt attccgacct tggcgaagtc
     5281 ctgctcgaat tcgaaaccgt tgaccgactc gcgggtgtcg acgacggatt tgagcagttg
     5341 gcgaagtccc ggaatgtccc actggccgcc ggagaggtcg aacagcgaag tgccgggcgc
     5401 ctttagcgga tcctcgccgt aaactacgta gaagcagcgg cttccggcaa gcaaatggag
     5461 tgtgtcgtcg agcaccagga aaggttcggg caaggtatcg acgatcgcca gtgccagcga
     5521 ttgcgcttgg attaggtcgg aaggcggctt gataaaggtt gctccagcag gcggggagcg
     5581 tcgtatctct cagccaccgg cgcgccgatt cgaaaggccg gtgatgccat cgtcatacac
     5641 gattgccggg caacccccta acctgcatca agtcgcgggc gggtcggatc gatgtcgcga
     5701 ccggcttgcc gggatgtgcg gtcaggagtg gcggtcgccc agtcgcacgt tgagcttcgc
     5761 aagccgcgcc ttcaccatct cgatggcctt ggggtttgtc gcttgaagct cccgtagctg
     5821 gtcctggtcg atgtgcgtca ccttgccgga ctcgatgtct gcaagcagct tgaccagccg
     5881 atctcgctcc tcatgccaat tctcgccgct catcccggtc tccgcccctt ctcgtcattc
     5941 cggccttgag ccgggactcg ccttcacttc aacggcaacg cagcaaaccc gaaatcctcc
     6001 gcaaaatcgc gccaggtcgg attcacctca tggatcagct cgtccttgtt ctcaaagcgg
     6061 tagaaagtca ggcagacccc ggatcgagtc cggggtgacg acacttccgc gctccccgtc
     6121 gtccccgatt taatcccgga cccgccttgt tcgtcccctc agatcggcgc attctacgcc
     6181 gctttctccg ccgcgacgac gcccaccgcg ccgagctaga ggccaccgag ttcaagggca
     6241 agagcgtcga cgtcagccgc ttcaagggcc tcggcgagat gaacccggcg caattgaagg
     6301 aaacgacgat gagcccggac acccgctctc tcatcaagat cacgcttccc ggcgaatatc
     6361 aggaccgcca gccggtcaaa gatctggttg agcggctgat gggccgcgac cccgcgaagc
     6421 gctttgagtt catccagaac agcgcggcgg ccctggacga aggcgccata gacgcgtagc
     6481 ggccggcgac gagccgtcga cattttttga gttgctgacg agtccatgac atagctgctc
     6541 catggcaatc cggatcgcag gcgctgctgt tttcctgctc gccggctgca ccgtggtcga
     6601 cgacagcgcg gttccggagt ctcccgacat ccagcggctc gaaaaacagc tggcgcagca
     6661 cccgtgcgtc ggcggactcg atggctggca gcgtaattac cgcttctctc gaaagaccgg
     6721 actcttctcc ccctattcgc tcagcccaga cctcgatgtg atcgagttcc atctgcggcg
     6781 cgcacggacc gtgaccatcg ctccggggct caacgtcctc cctcccgaag caggcgggaa
     6841 ctggcccgac agccaggcga tccaaaccgt ggatggccgc tatcggctta cggacggctc
     6901 gctcaaactt gctccgtgca acgcggtgcc tggcaactga tcaagcggag gcggcaatca
     6961 tctgccgggc aatctcgtct tcgcccatta tgacgcggtt cgctccgtga tccttaaggt
     7021 gctgaacttc ctcggccgag tgtgctcggg cgatgatgct gatacccggg ttcagcttgc
     7081 gcgccacctc ggcaatgcca cccgcctcga agccctcggg gattgcgatc aaaaggtgcg
     7141 atgcgcgctc gatgccggca tcgatcagga tttcacgaga cgccgcattg ccgcggaccg
     7201 tttcgacgcc agcctgtctc gctagttcga ccacgtcgaa ctggtcgtct ataaggacga
     7261 aattgcgccg ggcacttcgc agtcgccggc tgacgagctt gccgactctg ccataaccga
     7321 ccacgatgat attttcggac ggcgcttcga cctctgacgc ctcggctgct cttcgcaccc
     7381 gctttgcggc aagtccgaag atcaaagggt gcaggaggat tgaaatgatc gcgcccgcaa
     7441 ggatcaggtc gcgtgccgcg gcgggcagaa tgttcaggtc cgtgccaagg ttggcgagga
     7501 tgaacgagaa ctcgccgatc tgcgcgaggc tggcggaaac ggtgatcgcc gtctggttgt
     7561 cgtatctaaa tgccttcacg attgcgtaag ccgccacgga cttgccgacg atgatgatgg
     7621 agacagtggc aagcagcggg agcggctgct ccaaaagaac tgccggatcg aacaacattc
     7681 cgaccgatac gaagaacagg acggcgaagg cgtcacgcag cggcagcgtc tcctcggtcg
     7741 ccctccggct gagctgggtt tcgcccagga tcatcccggc gaagaaggcg ccgagcgcaa
     7801 aggatacgtc aaagacgagc gccgccccga atgcgacgcc caacgcgatt gacaagacgg
     7861 cgagcctgaa cagctctcgt gatccggtat gcacgaccca atgaagtgcc cagggaatta
     7921 cgcgcttgcc gacgatgagc atgaacgcga cgaacccgac gatcttcacc aaagtcaccg
     7981 agaaggacat tccgatcgaa gttgcaccat cgtcggcgct cgttgccgcg accgctatcg
     8041 cgggcaggag cacaagcgcg agaaccgtcg cgagatcctc gacgatcaac catccgaccg
     8101 cgatccggcc ccggtcggtg ttgagcaggt tgcggctttc gagtgcgcga agcagcacga
     8161 cggtgctcgc gacggacagg gacatgccga aaacgagccc gcttagcagt ccccagccga
     8221 gcacctccgc aaggatcatt cccatcgagg tggcgacagc gatctgaaca gcagcacccg
     8281 gcaatgcgat cttccggact gacagcagat cgcgaagtga gaagtgcagc ccgacgccga
     8341 acatcagcaa gatgacgccg atctcggcca gctcggccgc gagattgccg tcagcgacga
     8401 atcccggagt aaatggcccg acaaggacgc ccgcgagcag gtaacccgca atcggcgaca
     8461 ccttcagccg gtgcgcgatg gccccgagga cgaacgcggc gacgagcccc gccacgatcg
     8521 tgccaatgag tggagtgtgg tgaggcattg gcttcaacta gaaggccgaa gcacttccgc
     8581 aaaccccgtt tgcacaggag gaagcgctca gggacgaatg gtttgggcta ctgcgcgccg
     8641 agtgcagccg cgccgatgcg aagcggcgcc gcaacagcgc gaacgcgggc taaccgtgct
     8701 tcttcctccg cctgttccgc cggcggaact cagcctggta ggtttcccag cgtttgcgca
     8761 cccaccttcg cgttttccgc cagcgaatgg cgttcaacaa atacatcacc gccatgccgg
     8821 cgaggaaggc gacgatcaaa ttttgcacgg gccggaaata gcagccgcgt ccttgactgg
     8881 gaagcgcccg ccgccttccc ggtcatgcaa tgagccgggt gccgccgcgg gatcgggaag
     8941 cgcccgcacg aacgaaagtc gtgctaaggc gctgatttgg cgctttactc cggtcgttac
     9001 ggccgttagc ggcatcgagc gtgatcgccg cgtgaaggag ccctcgcgta cctacccgac
     9061 aactagaagc agagctgatc gcggccaaaa atgctctccg cgagagcgac gcgcgattcg
     9121 agactctggc cgacgcgctt ccccacatgg tgtggtcgac gctccccgac ggctatcacg
     9181 attattacaa cgcccgctgg tacgaattca ccggcgttcc catgggctcg accgacggcg
     9241 aagcgtggaa cggcatgttc caccccgacg accaggggct ggcgtgggag aagtggcggc
     9301 acagcctcgc caccggggag ccctacgaga tcgaatatcg ccttcgccac cgaagcggcg
     9361 aatatcgctg gacgctcggc cgggcgatgc cgatgcacga cgag
//
LOCUS       DATAKH010000023         8618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_27576,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000023 DATAKH010000000
VERSION     DATAKH010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8618
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27576"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..811)
                     /locus_tag="VHN55_00730"
     CDS             complement(<1..811)
                     /locus_tag="VHN55_00730"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010407547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /protein_id="HEX2802497.1"
                     /translation="MKKVRKAIFPVAGLGTRLLPATKSIPKEMLTIVDRPLIQYAVDE
                     AREAGIDQMIFVTGRGKSSLVDYFDSAFELEAVMREKGKSLEVLEPSRARFGEVVTVR
                     QQEPLGLGHAVWCARDIVGDEPFAVLLPDELMLGKPNCLAQLVSAYERVGGNVVAALE
                     VADSETHKYGVIDPGPSDGRLTEIKGMVEKPKPGTAPSNLMLPGRYILQPEVMRQLDT
                     QERGAGGEIQLTDAMARLVGKQPFNAWTFEGARHDCGSAAGFVMANIAAALG"
     gene            complement(808..1164)
                     /locus_tag="VHN55_00735"
     CDS             complement(808..1164)
                     /locus_tag="VHN55_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802498.1"
                     /translation="MHEPLREGTVTHSLPLRIAICAGLLGPSACGNMGDLEPAPGRSL
                     PVKPLMARATPTPEQLLTPPAYANPDRIDELMKRSAPRQADRFDLPPPSGEAPTVPIE
                     ELDEEQTDQIGPVTPQ"
     gene            1216..1776
                     /locus_tag="VHN55_00740"
     CDS             1216..1776
                     /locus_tag="VHN55_00740"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX2802499.1"
                     /translation="MPKRLAIAAALAAISVSGCDRGRSDGQPAQTPESPSKGVERSRA
                     GQAMPDSKLFNPDEEQATMAETAGRPVLVNLWASWCAPCVKELPTLDALSRRPGAPRI
                     VLVSEDIGGRTSVDAFLESHGIGNLESWRDPNMALSAGLGVQVMPTTVYYDSSGREIW
                     RYVGELDWTSDEAAKLLAEAGQGATR"
     gene            complement(1736..2743)
                     /locus_tag="VHN55_00745"
     CDS             complement(1736..2743)
                     /locus_tag="VHN55_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016743781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2802500.1"
                     /translation="MKPLDRQMFERKVADASGAVDGDGRHVIRTQMNRSDWAILVALA
                     LIWGAAFFFISVAVHAIAPLTYVWLRLSIAAAGLWLFLWWSGDRIALPRNVWGSILLL
                     ALLNNAIPFTLFGWGQTHIASGLASILNATTPIWGVVVAHLFTHDERMSPRKIAGILL
                     GFGGVATMIGPSLLSNLGNSALAQIACVAASLSYALAAVWARRFRRMGLPPMAVTTGQ
                     LTAGAAIMLPIALVVDQPWTAPFPGFGPLAALSALALLCTGFAYVLYFRLIDSAGATN
                     ALLVTLLVPPTAILLGALFLSEALAPQDFLGLLLIALGLAAIDGRLLSALRPARLRRA
                     A"
     gene            complement(2820..3644)
                     /gene="dapD"
                     /locus_tag="VHN55_00750"
     CDS             complement(2820..3644)
                     /gene="dapD"
                     /locus_tag="VHN55_00750"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEX2802501.1"
                     /translation="MNSELQQVVDRAWDDRESIGANTRGDVRQAVDAALAALDSGDVR
                     IAEKVGDEWVVHQWLKKAVLLSFRLNPMEMIAGGPGVAHWWDKVPSKFAGWGEREFRS
                     AGFRAVPGAIVRHGAYIAPGAVLMPSFVNIGARVGEGTMVDTWATVGSCAQIGRNVHI
                     SGGAGIGGVLEPLQAGPVVIEDDCFIGARSEVAEGVIVEQGAVLSMGVFLGASTKIVE
                     RATGEVYYGRVPAYSVVVPGALPSQHGGPSLACAVIVKRVDERTRSKTSINDLLRD"
     gene            complement(3641..4309)
                     /locus_tag="VHN55_00755"
     CDS             complement(3641..4309)
                     /locus_tag="VHN55_00755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEX2802502.1"
                     /translation="MDPRFAHIRDWIFDLDNCLYPASTELFALIDERMGAYIQRLLDC
                     DPVEARRVQKHHFHRHGTTLAGLMKDHGVDPDDFLDDVHSIPLDRVQCDERLASALER
                     LPGRKFVFTNGDAPYARRVLEAIGVYDRFDDLHDIRASSYRPKPDPHGYELLCERFGI
                     DSRSALLVDDMAINLAPAKALGMTTVWVDNGSERGTHGLGDFIDHKIAHVGEWLEQIL
                     GGNR"
     gene            4428..6743
                     /locus_tag="VHN55_00760"
     CDS             4428..6743
                     /locus_tag="VHN55_00760"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010218797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HEX2802503.1"
                     /translation="MNRRYLSSSAVAITLAFAVSACGGGGSGVQPLPFTPAPTPTPTP
                     TPTPTPTPTPTPTPTPTGTNYDTTEYRRSNYAVAANAIEAYDRGATGKGVKIGIVDSG
                     INPNLAEFKGRIDPASGDVAGGNRGASDEDGHGTAVSAVAAAGRNGADTMGVAFDATI
                     VSLRADKPGTCASEDGCEFFDDAIARGVDAARAAGAKVINLSLGGSAPSPALLSAFQR
                     AVDKGIVIVISAGNDGEDPVKRDNPDPFALTPAQRFPGAVIIAGSVGVDNGTGGININ
                     TISSFSNRAGSGAQWYLTALGYRDRAPDNTGAQYLWSGTSFSAPTISGAAALLAQAFP
                     HLSGSEIIEILFKSADDLGNKGVDSIYGRGRLNLAAAFQPIGTTSMADSGTAVSTSGN
                     GDLPAASGDANTGQALGAIILDGYDRAFALDLAKTLRQAEASHPLRQAIQSNVRVSSA
                     SAGPLTIAMTVSERRDNSQGFALERLGIGPEDARKSRLIAGSAIARLDKDTAAAFGFA
                     EGAKAMERRLSGAQSGAFLIAKDIAGDPGFAAQREGSVAVRRNLGPVAVTVSGESGSV
                     WTEVPTTATDSPYRWQSLAIDKTIGKTWVSAGLSRLDEKQTLLGGRMGNAFGGGGANS
                     LFLDVEARRQLGGGFSAAVMGRHGWTGFAGGKLQTEAYAFDIQKTRLFNDSDRIGFRV
                     AQPLRVSSGGLGMLLPTSYDYATETATSSWTTYSLTPSGREIDAELSYGSSLWNGSGW
                     LGGNVFMRRQPGHVASADNDYGAAIRFTLGF"
     gene            complement(6727..7476)
                     /locus_tag="VHN55_00765"
     CDS             complement(6727..7476)
                     /locus_tag="VHN55_00765"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007681975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX2802504.1"
                     /translation="MSRTLTLLFAIVSYAIFFATFLYLIVFVGDLQLGAVSQRTVDSP
                     SSTLSVWAAAVVNVALIALFGLQHSVMARQGFKRAWTKIVPKPVERSIYVLAASAVLI
                     IMFRFWQPLSAVVWDVTGSAAAMPLWALFWIGWGTVLLSTFLINHFELFGLQQAWMNM
                     SGREAPPPTFRTPLLYRLVRHPLYLGFFLAFWATPQMTAGHLLLAAGMSVYMLIAIRY
                     EERDLVAIHGRDYEEYRGRVGMLIPRLRNRG"
     gene            complement(7543..7830)
                     /locus_tag="VHN55_00770"
     CDS             complement(7543..7830)
                     /locus_tag="VHN55_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802505.1"
                     /translation="MRFFILAAIALFPATSTVAQRPATPKALEDLGLVRSHCPPTAAQ
                     QVARQIRQGRSPLFHRLVPLPPATAYQAVVREIDGCEVPLTVIEYRTGRRP"
     gene            complement(7881..8240)
                     /locus_tag="VHN55_00775"
     CDS             complement(7881..8240)
                     /locus_tag="VHN55_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019053176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEX2802506.1"
                     /translation="MNKETKVRARPAAITLTDGANARIAELMGRAPEGTIGVKLSTPR
                     RGCSGLAYSVDYVSEENPLDEKIETPGGTFYVDGASVLYLVGSIMDWREDDFAAGFVF
                     DNPNATGSCGCGESFTV"
     gene            complement(8237..>8618)
                     /locus_tag="VHN55_00780"
     CDS             complement(8237..>8618)
                     /locus_tag="VHN55_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011415463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly protein"
                     /protein_id="HEX2802507.1"
                     /translation="SVARKRDYLAGFLAGETEPGPATAGNEELKDRIVEALKSIYDPE
                     IPVDIYELGLIYDVEITEDGDAVVTMTLTTPHCPVAESLPNEVELRVLSVPGVRDAEV
                     KLVWDPPWDPSKMSDEARLELGML"
BASE COUNT         1609 a         2754 c         2823 g         1432 t
ORIGIN      
        1 gaccaagcgc cgccgcgata ttggccatca cgaaaccggc cgcgcttccg caatcgtggc
       61 gcgctccctc gaaagtccag gcattgaacg gctgcttgcc gaccagccgc gccatcgcgt
      121 cggtcagctg gatttcgccg cctgctcccc gctcctgggt atcgagctgc cgcatcactt
      181 cgggctggag tatgtagcgg ccgggaagca tcaggttcga cggtgccgta ccgggcttcg
      241 gcttttcgac catccccttg atctcggtca gccgcccgtc gctcggaccc gggtcgatga
      301 ctccatattt gtgggtctcg ctgtccgcta cctccagcgc cgcgacgaca ttgcccccga
      361 cccgttcgta agcggaaacc agctgtgcga gacagttcgg tttcccgagc atgagctcgt
      421 cgggaagcag caccgcgaaa ggttcgtcgc cgacgatgtc gcgagcgcac cagaccgcgt
      481 gaccgaggcc gagcggctcc tgctgccgta ccgtgacgac ctcgccgaac ctggcccgtg
      541 aaggctcgag cacctcgagg ctcttgccct tttcgcgcat caccgcctcg agctcgaagg
      601 cggaatcgaa atagtcgaca aggctggatt tcccgcgccc cgtgacgaag atcatctgat
      661 cgatccccgc ttcccgggcc tcgtcgactg catattggat caacggccga tcgacgatcg
      721 tcagcatttc cttcgggatc gacttggttg cgggaagcag ccgcgtgccc aagccggcga
      781 cggggaatat cgcttttcgg accttcttca ctgtggggtc accgggccga tctggtcggt
      841 ctgttcctcg tcgagttcct caatcggaac ggtcggcgcc tcaccgctag gcggcggcag
      901 gtcgaagcgg tcggcctggc gcggcgcgga tctcttcatc aactcatcga ttcggtcggg
      961 attggcgtaa gccggcgggg tgagcagctg ttcgggagtt ggcgttgctc gcgccatcag
     1021 cggtttcacc ggcaacgacc ttccgggggc cggctcgagg tcgcccatgt tgccgcacgc
     1081 ggaagggccg agaagtccgg cgcagatcgc aattcgaagc ggaagcgagt gtgtcacggt
     1141 accttcgcgt agcggctcgt gcattcttct tccagccggt tgtgcgtgat gctcgccctg
     1201 actatcggca gccgcatgcc gaaacgttta gcaatcgccg ccgcgctggc cgcaatttcc
     1261 gtatccggct gcgaccgggg ccgctccgac ggccagcccg cccagacacc cgaatccccc
     1321 agcaaggggg tcgagcgcag tcgcgcgggc caggccatgc cggactccaa gctcttcaac
     1381 ccggacgaag agcaggcgac aatggccgaa acggcgggca ggccggtgct ggtcaacctg
     1441 tgggcgagct ggtgcgcgcc ctgcgtcaag gagcttccga ctctcgacgc tttgagccgg
     1501 cggcccgggg cgccgaggat cgtcctggtg tccgaggata taggcgggcg cacttcggtc
     1561 gacgcgtttc tggagagcca tggcatcggc aatctcgaat cctggcgcga ccccaacatg
     1621 gccttgtcgg ccgggcttgg agtgcaggtg atgccgacca ccgtctatta cgattcgtcg
     1681 ggacgcgaga tctggcgcta tgtcggcgag ctcgactgga ccagcgacga ggcggctaag
     1741 ctgctcgccg aagccgggca gggcgcaacg cgctgagcag ccgcccgtcg atcgccgcga
     1801 ggccgagtgc gatgagaagc agcccgagga aatcctgcgg agcgagcgct tcggaaagga
     1861 acagcgcgcc gagcaggatc gcggtcggcg gcaccagcaa agtcaccagc agcgcgtttg
     1921 tcgcgcctgc cgaatcgatc agccggaagt agaggacgta ggcaaagccg gtgcatagca
     1981 gcgccagcgc cgaaagcgcg gcgagcgggc caaagccggg gaagggcgcc gtccacggct
     2041 ggtcgacgac cagcgcgatg ggcagcatga tcgccgcacc tgcggttagc tggccggtag
     2101 tgaccgccat tggcggcagg cccattcgcc tgaatcggcg agcccagacg gcggcgagcg
     2161 cataactgag tgaagcagcg acgcaggcga tctgagcgag cgccgagttg ccgagattag
     2221 agagcagcga cgggccgatc atggtcgcta cgccgccgaa tccgagcagg attccggcaa
     2281 tcttccgcgg gctcatccgc tcgtcgtggg tgaacaaatg ggcgaccacc acgccccaga
     2341 tcggcgtcgt cgcgttgagg atggacgcaa ggccgctggc gatatgggtc tggccccagc
     2401 cgaagagcgt gaacggaata gcgttgttga gcagcgccag cagcaggatc gagccccaga
     2461 cgtttcgcgg aagtgcgatc cggtccccgc tccaccacag gaacagccac agtcccgcgg
     2521 cggcgatcga caacctcagc cacacatagg tgagcggcgc gatggcgtgg acggcgacgc
     2581 tgatgaagaa gaaggccgcg ccccagatca aggcgagggc gacgaggatc gcccagtcgg
     2641 aacggttcat ttgcgtgcga atcacgtgcc gaccatcgcc gtcgacggcc ccggaagcgt
     2701 ccgcgacctt gcgttcaaac atctggcggt cgagcggctt catggcagat tggatctagc
     2761 cgccgtgcgc gcaccgcggc caacaaatgc acgctcgccg ccgataaggc gggcttatgt
     2821 cagtctcgga gcaggtcgtt gatgctggtc ttcgagcgcg tgcgctcgtc gacccgcttt
     2881 acgataactg cgcaggcgag ggacggtccg ccatgctggg acggcagagc gcccgggacg
     2941 acgacggaat aggccggaac gcggccataa tagacctcgc cggtcgccct ctcgacgatc
     3001 ttggtcgaag cgccaaggaa cacgcccatc gacaagactg ccccctgttc gacgattacg
     3061 ccttcggcga cctcggaacg ggcgccgatg aagcaatcgt cctcgatcac cactgggccc
     3121 gcctgcagcg gttcgagcac tcccccgata ccggcgccgc cagagatatg cacattacgg
     3181 ccgatctgcg cgcagcttcc aacggtggcc caggtgtcga ccatcgtccc ttcgccgacg
     3241 cgggccccga tgttgacgaa gctcggcatc aacactgctc ccggggcgat gtaggcgccg
     3301 tggcggacga tcgctcccgg cacggcgcga aatccggccg accggaactc cctttcgccc
     3361 cagccggcga atttcgacgg caccttgtcc caccagtgag caacaccagg gccgcctgcg
     3421 atcatctcca tcggattcag ccggaacgac agcagcaccg ctttcttgag ccactggtgg
     3481 acaacccact cgtcgccaac cttttcggcg atccggacat cgccggaatc gagcgcggcc
     3541 agggcggcgt cgacggcctg gcgaacatcg ccgcgcgtat tcgcgccgat ggactcgcga
     3601 tcgtcccacg cgcgatcgac gacctgctga agctccgaat tcatctgttt cccccgagga
     3661 tctgctccag ccactcgccg acgtgcgcga ttttgtgatc gatgaaatcg ccgagcccgt
     3721 gcgtaccgcg ttcggagcca ttgtcgaccc agaccgtcgt cattcccagt gctttcgcag
     3781 gcgcgaggtt gatcgccata tcgtcgacga gaagcgcgga tcgcgaatcg atcccgaagc
     3841 gctcacagag cagctcgtat ccgtgtgggt ccggcttggg cctgtaactg ctggcccgga
     3901 tgtcgtgaag gtcgtcgaag cggtcgtata caccgatcgc ttcaagaact cggcgagcat
     3961 aaggagcatc gccgttggtg aagacgaact tgcgccccgg aaggcgctcc agcgcggatg
     4021 cgagacgctc atcgcactgc acgcgatcga gcgggatcga gtgtacgtcg tcgaggaaat
     4081 cgtccgggtc gacgccatgg tccttcatca gacccgcaag cgtggtgccg tggcggtgga
     4141 aatgatgctt ctgcacccgc ctggcttcaa ccgggtcgca gtcgagaaga cgctggatgt
     4201 acgcgcccat gcgctcgtcg atcagcgcga acagctcggt cgacgccggg taaaggcagt
     4261 tgtcgagatc gaaaatccag tcgcggatgt gagcgaagcg ggggtccatg agcgtgcggg
     4321 cgccttagcg gttaaccatc cttcaggaaa atgaaagctt tgataggaga taagcgcaac
     4381 aggggaagtg cttgattttc aagatgttga gcgggagtta ggggcaaatg aacagacgct
     4441 atctgtcgag cagcgcggtc gccattacgc tcgctttcgc agtctctgcc tgcggcggcg
     4501 gtggatcggg cgtgcagccg ttgccgttca ctccggcgcc gactccaacg cctacaccga
     4561 ctccaacacc cacacccact ccaacaccca ctccgactcc gaccccaact ggcaccaatt
     4621 acgatacgac cgagtatcga aggtccaact atgcggtcgc cgcgaacgcg atcgaagcct
     4681 acgatcgagg agcgacgggc aagggcgtca agatcggcat cgtcgactcc ggcatcaatc
     4741 ccaacctcgc cgaattcaag ggcaggatcg acccggccag cggcgacgtc gccggcggca
     4801 atcgcggcgc cagcgatgaa gacgggcacg gaaccgcagt ctcggccgtt gccgccgccg
     4861 gccgcaatgg cgccgacacg atgggcgttg cattcgacgc gacgatcgtt tcgcttcgtg
     4921 ccgacaagcc aggcacctgc gccagcgagg acggctgcga atttttcgat gatgcgatcg
     4981 cccggggagt cgatgcggcg cgggcagcgg gcgccaaggt gatcaatctc tcgcttggcg
     5041 gatcggcgcc gagcccggca ttgttgtcgg cattccagcg ggccgtggac aaggggattg
     5101 tcattgtcat ttcggcggga aatgacggtg aggatccggt gaaacgcgat aatccggatc
     5161 cgttcgcgct gacgccagcg cagcgattcc ccggcgcggt gatcattgcc ggatcggttg
     5221 gggtcgacaa tggaaccggc ggcatcaata tcaacacgat ctcgagcttt tcgaacaggg
     5281 cgggatcggg cgcccaatgg tacctgacag cgcttggtta ccgcgaccgg gcgccggaca
     5341 atacgggcgc gcagtatctc tggtcgggaa cgagcttttc ggcgcccacc atatcgggcg
     5401 cagccgccct gctggcgcag gcgtttccgc atcttagcgg cagcgagatc atcgaaatcc
     5461 tgttcaagtc ggcagacgac ctggggaaca agggcgtcga tagcatctac ggccgcggcc
     5521 gcctcaatct cgccgcggcc ttccagccga tcggcacgac cagcatggcc gacagcggga
     5581 ctgccgtcag caccagcggc aatggggact tgcccgcggc gtccggcgac gcgaacacgg
     5641 gtcaagcgct cggcgccatc atcctggacg gctacgaccg cgccttcgca ctggatctgg
     5701 cgaagacgct ccgccaggcc gaagcgtccc acccgctgag gcaagcaatt cagagcaacg
     5761 tccgagtgag cagcgcgtcg gcgggaccgt tgacgatcgc aatgacggtg tcggagcgtc
     5821 gcgacaattc gcagggcttc gctctcgaga ggctcggaat cggacccgag gatgctcgca
     5881 agtcgcggct gatcgcgggc tccgcaatcg cccggctaga caaggatacc gccgccgcct
     5941 tcggctttgc ggagggagcc aaagcgatgg agcgccgcct ttccggagcg cagtccggcg
     6001 ccttcctgat cgccaaggac attgccggcg atcccggctt cgctgcgcaa cgcgagggta
     6061 gtgtcgccgt ccggcgcaac cttggcccgg tcgcagtgac ggtgtcgggc gaaagcgggt
     6121 cagtgtggac ggaagtcccc acgaccgcga ccgattcccc ttatcgatgg cagagcctcg
     6181 cgatcgacaa aacgatcggg aagacgtggg tttcggcagg gctcagccgg ctcgacgaga
     6241 agcagacgct gctcggcggc cggatgggca atgcattcgg gggcggcggc gcaaacagcc
     6301 tgttcctcga cgtcgaggct cgccgccagc tcggcggcgg gttcagtgca gcggtcatgg
     6361 gccgccacgg ctggaccggc ttcgccggcg gaaagctgca gacggaagcc tatgctttcg
     6421 acatccagaa gactcggctg ttcaacgaca gcgaccgcat cggctttcgc gtcgcgcagc
     6481 cgttgcgggt ctccagcgga ggcctgggga tgcttctccc gacctcgtac gattatgcga
     6541 ccgagacggc gacgagcagc tggacgacct attcgctgac gcccagcggc cgcgaaatcg
     6601 atgccgagct cagctacggc tcgagcttgt ggaacggaag cggctggctc ggcggcaatg
     6661 tgttcatgcg ccggcagcct gggcatgtcg ctagcgccga caacgactat ggcgcggcaa
     6721 tccgcttcac cctcggtttc tgagccgcgg gatcagcatt cccacgcggc cgcgatattc
     6781 ctcgtaatcc cggccatgga tggcgaccag gtcgcgctcc tcgtaacgga tggcgatgag
     6841 catgtagacg gacatcccgg ccgccagaag gaggtggccg gcagtcattt gcggggtcgc
     6901 ccagaacgcc aggaagaagc ccaggtagag ggggtggcga accagccggt aaagcagcgg
     6961 agtcctgaat gtggggggcg gcgcttcgcg gccactcatg ttcatccagg cctgctgcaa
     7021 tccgaatagc tcgaaatggt tgatcaggaa ggtgctcaga agcaccgttc cccagccgat
     7081 ccagaacagc gcccacagcg gcattgcggc cgcgctgccc gtgacatccc agacgactgc
     7141 agacagcggt tgccagaaac ggaacatgat aattagcacc gcactggcgg ccagcacgta
     7201 gatgctgcgc tcgaccggct tcggcacgat cttcgtccac gcgcgcttga atccctggcg
     7261 agccatgacg ctgtgctgaa gcccgaacag cgcgatcagt gcgacattca ccacggcggc
     7321 cgcccagacg gacagggtcg aggacggcga gtcgaccgtc ctttgagaca ctgccccgag
     7381 ttgcaggtcc ccgacgaaga cgatcaggta gagaaaggtc gcgaaaaaga tcgcgtagct
     7441 gacaatcgcg aacaggagcg tgagcgtgcg agacataccg atcccccgtc ggatgtgtgg
     7501 cggctattgc ctaccacatg ccgggccgcc agcgaagccg ggctatggcc ggcggccggt
     7561 ccggtattcg atgacggtca acggcacttc gcaaccgtca atttcccgca cgacagcctg
     7621 ataagccgtt gccgggggaa gagggacgag gcgatgaaac agcggcgacc gaccttgccg
     7681 gatctgcctc gcgacctgct gcgctgcggt cggcgggcaa tggctgcgga cgagtccgag
     7741 gtcttcgagc gcttttggag tcgccggccg ttgagcgacg gtcgatgtcg ccgggaacaa
     7801 ggcgatggcg gcgagaatga agaaacgcat tgcttcctcc tcgccggctt aactagcagg
     7861 aagagcggcc ggtttcgaga tcagaccgtg aagctctcgc cgcagccgca cgagccggtg
     7921 gcgttgggat tgtcgaacac gaagccggcg gcaaaatcgt cctcgcgcca gtccatgatc
     7981 gatccgacaa gataaagcac ggacgcgccg tcgacgtaga aggtgccgcc cggggtctcg
     8041 atcttctcgt cgagcgggtt ttcctcgctg acgtaatcga ccgaataagc gaggccggag
     8101 cagccgcggc gcggagtcga cagctttacg ccgatcgtgc cctcgggtgc gcggcccatc
     8161 agctcggcga tgcgcgcgtt ggcgccatcg gtgagcgtga ttgcagccgg gcgggctcgg
     8221 accttggttt ccttgttcat agcattccca attcgaggcg cgcctcgtcg ctcatcttgg
     8281 acgggtccca cggcgggtcc cagaccagct tgacctcggc atcgcgcact ccggggaccg
     8341 acagcacccg aagctccacc tcattgggaa gcgattccgc gacggggcag tggggcgttg
     8401 tcagtgtcat ggtcacgacg gcatcgccgt cctccgtgat ctcgacgtcg tagatcagcc
     8461 cgagctcgta gatgtccaca gggatttcgg ggtcgtaaat cgacttcagt gcctcgacga
     8521 tccggtcctt caattcctcg ttgccggccg tggccggccc gggctcagtc tcgcccgcga
     8581 gaaagccggc gagatagtcg cgcttgcggg ctacgctc
//
LOCUS       DATAKH010000024         1550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_575,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000024 DATAKH010000000
VERSION     DATAKH010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_575"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VHN55_00785"
     CDS             <1..189
                     /locus_tag="VHN55_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007680988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX2802508.1"
                     /translation="PGLLTRLDVAVGDKVEPGQPVAVMEAMKMENILRAPKAATVKAT
                     PAKAGDSLAVDQVIVEFE"
     gene            complement(278..>1550)
                     /locus_tag="VHN55_00790"
     CDS             complement(278..>1550)
                     /locus_tag="VHN55_00790"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX2802509.1"
                     /translation="VVATMPLLRPGEIATVIERAQISHAIVDSRFIGDFRDAVDQTHS
                     VKHIVKYDGDYGKGELETRCASLDPLPPADTGRDDPCIIAFTSGTTGVPKGCVQFHRD
                     VLAPCDTFAKHLVDPKPGDVFLTSAPMAFTFGLGITPMFPLRFGAASATMEQASPQLM
                     LEAISKFGVTHLGTAPTAYKAMLSQPGLDAALKTLRYCVSAGEHLPEATWRAWKERTG
                     IAITDGIGSTEMMHIFVSAAGDDIRPGATGKAVPGYVATVLDDDGNPMDEGTGRLAIK
                     GPTGCRYLDDERQRNYVVNGWNITGDTYRRDADGYYWYLARSDDMIVSSGYNIGAPEV
                     ENALLSHPAVAECAVIGVPCEERGQKVKAFVVLAADAESSDDLMAELQAHAKAQIAPY
                     KYPREIEFVEALPKTATGKLRRSELRQLKVD"
BASE COUNT          252 a          493 c          524 g          281 t
ORIGIN      
        1 ccagggctcc tgacgcgcct cgacgtcgcg gtcggcgaca aggtcgagcc cggccagccg
       61 gtcgcggtca tggaagcgat gaagatggaa aacatcctcc gcgcgcccaa ggcggcgacc
      121 gtcaaggcga ctccggcaaa agcgggcgac agcctcgccg tcgatcaggt catcgtggag
      181 tttgaatgag gagccgagct ggcgcgaaac actgcgagcg cgcaacatat tcgcgctcgg
      241 cgtcatatgc atggtcctcg tggcttgggc cgttgggcta atcgaccttt agttgcctca
      301 actcgctccg cctgagcttg cccgtcgccg tcttgggcag ggcctccacg aactcgattt
      361 cgcgcggata tttgtaggga gcgatctgcg ccttcgcgtg ggcctgcagc tccgccatca
      421 gatcgtctga cgactctgca tccgccgcaa gcaccacgaa cgccttcacc ttctggccgc
      481 gctcctcgca cggaaccccg atcaccgcgc attcagcgac ggcggggtgg gagaggagcg
      541 cattctccac ttccggagcg ccgatgttgt agccggagct gacgatcatg tcgtcgctgc
      601 gcgcgaggta ccagtaatag ccgtcggcgt cgcggcggta ggtgtcgccg gtgatgttcc
      661 agccgttgac gacgtagttc cgttggcgct cgtcatcgag gtaccggcag cctgttgggc
      721 ccttgatcgc gagccggccg gtgccttcgt ccatcggatt gccgtcatcg tcgagcaccg
      781 tcgcgacata gccgggcacc gccttgccgg tggcgccggg gcgaatatca tcgcccgctg
      841 ccgagacgaa gatgtgcatc atctcggtcg agccgatgcc gtcggtgatc gcgatccccg
      901 tgcgctcctt ccacgcccgc cacgtcgctt cgggaaggtg ttcgccggcg gaaacgcaat
      961 accgcagcgt cttgagggcc gcgtcgagcc ccggctgcga cagcatcgcc ttgtaggcgg
     1021 tgggggcggt gccgaggtgc gtgactccga acttggagat ggcctcgagc atcagctgcg
     1081 ggctcgcttg ctccatcgtc gcgctcgccg cgccgaagcg aagcgggaac atcggcgtga
     1141 ttccgaggcc gaaggtgaag gccatcggcg cactggtcag gaagacgtcg cccggctttg
     1201 gatcgaccag gtgcttcgcg aacgtgtcgc acggcgccag cacatcgcgg tggaactgga
     1261 cgcagccctt gggcacaccg gttgtgccgc tggtgaaggc gatgatgcac ggatcgtcgc
     1321 ggccggtgtc ggcgggcgga agcggatcga gcgaagcaca gcgcgtctcc agctcgccct
     1381 tcccgtaatc gccgtcgtac ttgacgatgt gtttgacgct gtgagtctga tcgacggcgt
     1441 cgcggaagtc gccgatgaag cggctgtcga caatcgcgtg gctgatctgc gcgcgttcga
     1501 tcacagtcgc gatttcgccg gggcgaagca aaggcatggt cgcgacgacc
//
LOCUS       DATAKH010000025         4440 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_588,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000025 DATAKH010000000
VERSION     DATAKH010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4440
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2008)
                     /gene="pnp"
                     /locus_tag="VHN55_00795"
     CDS             complement(<1..2008)
                     /gene="pnp"
                     /locus_tag="VHN55_00795"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007013687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEX2802510.1"
                     /translation="MFDIKTVEIELGGKTLKLETGRVARQADGAVLATLGETVVLCAV
                     TAAKSVKPGQDFFPLTVHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPL
                     FPEGFYNEVLVIAQVLSYDGENEPDIVAMYAASAALTISGVPFMGPIGAARVGFIDGE
                     YVLNPGSAQLAESKLDLVMAGTPNAVMMVESEAQELSEDEMLGAVMFGHKASQKVCEA
                     IISLAEKAAKEPWELATDTGQKAEIKAKLKDLVGKDIAAAYKLTNKSERSAALNAARD
                     KAKEAFAEADPQDQLVAGKAVKGLEADIVRNAILKDGRRIDGRDTRTVRPIESMVHFL
                     PRAHGSALFTRGETQAVVTVTLGTKESEQMIDGLEGLSYSRFMLHYNFPPYSVGEVGR
                     FGAPSRRETGHGKLAWRALRPMLPSNEEFPYTIRVLSDITESNGSSSMATVCGGSLAL
                     MDAGVPIKAPVAGIAMGLILEGKDFAVLSDILGDEDHLGDMDFKVAGTANGVTSLQMD
                     IKVAGITEEIMKTALAQAKEGRAHILGEMAKALPDVRTELSEHAPRIETMQIPKDKIR
                     EVIGTGGKVIREIVAETGAKVDIDDEGMIKISSSDLSQIEAARQWIHGIVAEPEPGTI
                     YTGKVANIVDFGAFVTFMPGKDGRRIDGRDTRTVRPIESMVHFLP"
     gene            complement(2170..2439)
                     /gene="rpsO"
                     /locus_tag="VHN55_00800"
     CDS             complement(2170..2439)
                     /gene="rpsO"
                     /locus_tag="VHN55_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEX2802511.1"
                     /translation="MSITAEEKQKLIKAHGRGKGDTGSPEVQVAILTSRIKTLTEHFK
                     THAKDNHSRRGLLMMVNQRRSLLDYLRREDEQRYTDIIAKLGLRK"
     gene            complement(2446..3345)
                     /gene="truB"
                     /locus_tag="VHN55_00805"
     CDS             complement(2446..3345)
                     /gene="truB"
                     /locus_tag="VHN55_00805"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008066943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEX2802512.1"
                     /translation="MINGWIVLDKPVGLGSTQAVSRIKRALREAGEPKTKVGHGGTLD
                     PLASGVLPIAIGEATKVAGRMLDATKAYEFTIKFGEETDTLDTEGQVVATSEVRPTPG
                     QVEVVLPRFTGEIEQVPPSYSALKIEGKPAYARARAGEEVELKPRTVTVHDLKLASFD
                     DNSVTLATTVSKGTYIRSLARDIARALNSRGHVTMLRRTRAGPFSLESAISLDFLNEA
                     AKARDLTRAVLPLEAALDDIPALPVTPGQAQLLRHGQRLAGFPAQPGLQLATSEGTPV
                     ALVEALADGLRVVRGFNFPDVAE"
     gene            complement(3342..3878)
                     /locus_tag="VHN55_00810"
     CDS             complement(3342..3878)
                     /locus_tag="VHN55_00810"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX2802513.1"
                     /translation="MIEGLKSPLKGDGCRAELLSEAHREVLGSACAEDPDLWEIYYIN
                     YGPENFDRAFDWLMRRPDWVRFALYEGDAFVGMSSYLNIDDSRALLEIGSTYYRPAAR
                     GTGFNRRCKDMMIRHAFDCGYRRIEFRVDRRNLRSQAAMKNLGAVREGVLRGHGPTWN
                     GHMRDTVLFAILKDEWPV"
     gene            complement(3875..4267)
                     /gene="rbfA"
                     /locus_tag="VHN55_00815"
     CDS             complement(3875..4267)
                     /gene="rbfA"
                     /locus_tag="VHN55_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEX2802514.1"
                     /translation="MRRNETAEGRSVRLLRVGEQVRHVLSELLQRGDVHDQTLQSHLV
                     SITEVRMSPDLRHATVFVKPLLGQDEEAVLKALRQNTAYLQREVAQRVRTKYAAKLKF
                     LADESFDEGTHIDRLLRSEKVAQDLDEE"
BASE COUNT          701 a         1373 c         1498 g          868 t
ORIGIN      
        1 ggggcaggaa gtggaccatc gattcgatcg gccgcaccgt cctggtgtcg cggccgtcga
       61 tccgtcggcc gtccttgccg ggcatgaagg tcacgaaggc gccgaaatcg acgatgttgg
      121 cgaccttgcc ggtgtagatg gtgccgggct cgggctcggc gacgatgccg tggatccact
      181 ggcgggcggc ctcgatctgg ctcaagtcgg aggagctgat cttgatcatg ccctcgtcgt
      241 cgatgtcgac cttggctccg gtctcggcga cgatctcgcg gatgaccttg ccgccggtgc
      301 cgatgacttc gcggatcttg tccttgggga tctgcatcgt ctcgatccgc ggcgcatgct
      361 cggaaagctc ggtgcggacg tcggggagcg ccttggccat ttcgccgagg atgtgggctc
      421 ggccctcctt ggcctgggcc aaagcggtct tcatgatctc ctcggtgatc ccggcgacct
      481 tgatgtccat ctggagcgaa gtgaccccgt tggcggtgcc ggcgaccttg aagtccatgt
      541 cgcccaagtg gtcctcgtcg ccgaggatgt cggagaggac cgcgaaatcc ttgccctcga
      601 ggatcaggcc catggcgatt ccggcgaccg gcgccttgat cgggacgccc gcgtccatca
      661 gcgcaagcga gccgccgcag acggtggcca tcgagctgga gccgttggac tcggtgatgt
      721 cggagaggac ccggatcgta taggggaact cctcgttcga cggcagcatc ggccgaagag
      781 cgcgccaggc gagcttgccg tggccggtct cgcggcgcga cggggcgccg aagcggccga
      841 cttcgccgac cgaatagggc gggaagttat agtgcagcat gaagcgcgag taggagagcc
      901 cctccagccc gtcgatcatc tgctctgatt ccttggtgcc cagggtgacg gtgacgaccg
      961 cctgggtctc gccgcgcgtg aacagggccg agccgtgggc gcggggcagg aagtggacca
     1021 tcgattcgat cggccgcacc gtcctggtgt cgcggccgtc gatccgtcgg ccgtccttga
     1081 ggatggcgtt gcgaacgatg tcggcctcta ggcccttgac cgccttgccg gcgacgagct
     1141 gatcctgcgg gtccgcctcg gcgaaagctt ccttcgcctt gtcgcgggca gcgttgagcg
     1201 ccgccgagcg ctcggacttg ttggtgagct tgtaggcggc ggcgatatcc ttgccgacga
     1261 ggtccttgag cttcgccttg atctcggcct tctggccggt gtcggtggcg agctcccacg
     1321 gctccttggc ggccttctcg gcgagcgaga tgatcgcttc gcagaccttt tggctggcct
     1381 tgtggccgaa catgacggcg ccgagcatct cgtcctcgga cagctcctgc gcctcggact
     1441 cgaccatcat caccgcgttg ggggtgccgg ccatgaccag gtcgagcttg ctttccgcga
     1501 gctgggcgga gccggggttg aggacatatt cgccgtcgat gaagccgacc cgggcggcgc
     1561 cgatcgggcc catgaagggg actccgctaa tcgtcagcgc tgcggacgcg gcgtacatgg
     1621 cgacgatgtc aggctcgttc tcgccgtcgt aggaaaggac ctgggcgatg acgaggacct
     1681 cgttgtagaa gccctccggg aacagcggcc ggatcggccg gtcgatgagg cgggaggtga
     1741 gcgtttcctt ctcggtcgct ccgcgctcgc gcttgaagaa gccgccgggg atacgcccgg
     1801 cagcggagaa tttctcctgg tagtggacgg tcagcgggaa gaagtcctgc cccggcttga
     1861 cgctcttggc ggcggtgacc gcgcaaagga ccacggtttc gcccagcgtc gcgaggaccg
     1921 cgccgtcggc ctggcgggca acgcggcccg tttcgagctt gagggtcttg ccgccgagct
     1981 cgatttctac ggttttgatg tcgaacattt tatttccttc accccgcggg ccggatgccg
     2041 gcgggacatc tgtcgcgagc tagccggctc gcagcggttc ggggcctgtt tcgcccctag
     2101 agccatccgc cgaaatgcgg tgaggccccg atacgcaaaa cggctccgcg cgggagccgt
     2161 ttcgttaggt tacttgcgaa gtccgagctt cgcgatgatg tcggtgtagc gctgctcgtc
     2221 ctcacgacgg agatagtcga ggagggagcg gcgctggttg accatcatga gcagcccgcg
     2281 acgcgaatgg ttgtccttcg cgtgcgtctt gaaatgctcg gtcagggtct tgatgcggct
     2341 ggtcaggatg gcgacctgga cctccggcga accggtatcg cccttgccgc ggccgtgggc
     2401 cttgatcagc ttctgctttt cttcagcggt aatcgacatt cgtgtttact ccgcgacatc
     2461 gggaaaattg aacccccgga cgaccctgag gccgtcggcc aaggcttcca cgagagccac
     2521 cggagttccc tccgatgtcg caagctgaag ccccggctgt gcggggaaac cggcaaggcg
     2581 ctgtccgtga cggagcagct gtgcctggcc gggggtgacg gggagggccg ggatgtcgtc
     2641 cagcgccgct tccaacggaa gcaccgcccg tgtcaggtcg cgcgccttag cggcttcgtt
     2701 cagaaagtcc agcgaaatgg ctgattcgag cgaaaacggg ccggcgcgcg tccgcctcaa
     2761 catggtgacg tgtccgcgac tgttcaatgc gcgggcgatg tcgcgggcga gggagcggat
     2821 gtacgtgccc ttggagacgg tggtggcgag ggtgacgctg ttatcgtcga agctcgccaa
     2881 tttcagatcg tggacggtta ccgtccgcgg cttcagctcc acctcctcgc cggcgcgtgc
     2941 tcgggcgtag gcgggcttcc cctcgatctt gagcgccgaa taactgggcg gcacctgctc
     3001 gatctcgccg gtgaagcggg ggagcacgac ctcgacctgc ccgggcgtcg gccggacttc
     3061 gctggtcgcg acgacttgcc cttccgtatc gagcgtgtcg gtttcctcgc cgaacttgat
     3121 cgtgaactcg tacgccttgg ttgcatcgag cattcggccc gcgaccttgg tggcttcgcc
     3181 gatcgcgatc ggaaggaccc cgctggcgag cgggtcgagc gtgccgccgt ggccgacctt
     3241 cgttttcggc tcgcccgcct cgcgaagcgc gcgcttgatc cgcgagacgg cctgggtgga
     3301 gccgagcccc accggcttgt cgaggacgat ccagccgttg atcacaccgg ccactcatcc
     3361 ttcaggatcg cgaacagcac cgtgtcgcgc atgtggccgt tccaggtcgg gccgtggccg
     3421 cgaagcacgc cttcgcgcac cgcaccgagg ttcttcatcg cggcctggct gcgaagattg
     3481 cggcgatcga cgcggaattc gatccggcga taaccgcaat cgaacgcatg gcggatcatc
     3541 atatccttgc aacggcggtt gaacccggtg ccccgagccg ccggccggta ataggtgcta
     3601 ccgatttcta gaagggcgcg gctatcgtcg atattgaggt aactgctcat gccgacaaag
     3661 gcgtcaccct cataaagggc gaaccggacc cagtcgggac gccgcatcag ccagtcgaac
     3721 gcacggtcaa aattctccgg cccgtaattg atgtaataga tttcccagag atcgggatcc
     3781 tcggcgcagg cggaaccaag cacctcgcga tgcgcctcgc tgagcaattc cgcgcggcag
     3841 ccatcgcctt tcagaggcga cttcaggcct tcgatcattc ctcgtccaag tcctgggcga
     3901 ctttttccga gcggaggagc cggtcgatgt gggttccttc gtcgaagctc tcgtcggcga
     3961 ggaacttgag cttggccgca tatttggtgc gaacgcgctg ggcgacttcg cgctggaggt
     4021 acgcggtgtt ctggcggagc gccttcaaga cagcctcctc gtcctggccg agcaatggct
     4081 tcacgaacac ggtggcgtgg cgaaggtcgg gcgacattcg cacttcggtg atgctgacaa
     4141 ggtggctctg cagcgtttga tcgtggacgt cgccgcgctg gagcagttcg ctcagcacgt
     4201 ggcgcacctg ctcgccgaca cggagaagtc ggaccgagcg gccttcggcg gtttcgttgc
     4261 ggcgcatcag cccatcacct tcgggccatg atattcatgc caagaattat ctgacgtccc
     4321 gtattcttcg cgacagaaga atttggccat cgcaaggtca ttttgcagat agtcgtaagc
     4381 catcagctct gaatcctcgc gctcgtatac gagcacgtaa acgccttctg gttggggctc
//
LOCUS       DATAKH010000026         2243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_24157,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000026 DATAKH010000000
VERSION     DATAKH010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24157"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /locus_tag="VHN55_00820"
     CDS             complement(<1..780)
                     /locus_tag="VHN55_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2802515.1"
                     /translation="MAEQYDVVVLGSGPGGYVAAIRAAQLGLKTAIVERESLGGICLN
                     WGCIPTKALLRSAEVFHQIKHADAYGLSAGQPGFDLGKVVKRSRDVAGQLNRGVTGLM
                     KKNKIAVHMGEGKLTAKGKLSVTGADGKATELTAKHIIVATGARARDLPFAKADGQRI
                     WTYRHAMTPKEMPTELLVIGSGAIGIEFASFYADLGAKVTVVEMLDRVVPVEDAEISA
                     FLEKQLTKQGMQVLTSAGVESLKSDAKGVAAVIKTKDGKSAE"
     gene            complement(840..>2243)
                     /locus_tag="VHN55_00825"
     CDS             complement(840..>2243)
                     /locus_tag="VHN55_00825"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006950029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEX2802516.1"
                     /translation="LGALMLDNRLVEDVGLKLKPHHFHEELHARIYEAILKLTDKNMV
                     ANPVTLRPMFEADEAMKEVGGAGYLGKLTGSGAALIAAKDFAQQIYDLALLRALIGVG
                     RELVENALDTSEEVAPIEQIERAETELYKVAEEGGAEGKAKSFAEATREALQTAERAL
                     NSGGHLSGLTTGLENLNSKIGGLHNSDLIIVAGRPGMGKSALGTNIAFSAAQRFIRDT
                     EDGIEAEKSAGAAVALFSLEMSADQLATRILAEQSGISSENLRMGKISKQEFRELARA
                     AAALESLPLYIDDTPGLTIAALRARARRLKRQKGVGLVIVDYLQLLQGTGRNGNDNRV
                     QEISEISRGLKTLAKELNVPVIGLSQLSRAVEQREDKRPQLSDLRESGSIEQDADIVL
                     FIYREDYYLAAKQPADDHPDFAEWQEEMGRAYGRAEVIVAKQRHGATGKVRLKFDSRT
                     TKFSDPVDEGFLPEARG"
BASE COUNT          335 a          747 c          709 g          452 t
ORIGIN      
        1 ctccgccgac ttgccatcct tggtcttgat caccgccgcg acgcccttgg catccgactt
       61 gaggctttcg acgcccgcgg acgtcaggac ctgcatgccc tgcttggtca gctgcttctc
      121 gagaaacgca ctgatctccg catcctcaac gggcacgacc cggtccagca tttcgaccac
      181 ggtcaccttg gcgcccaggt cggcgtagaa actggcaaat tcgatcccga tcgcgcccga
      241 tccaatgacc agcagttcgg tcggcatttc cttcggcgtc atcgcatgac gataggtcca
      301 gatgcgctgc ccatctgcct tcgcaaacgg cagatcgcgc gctcgcgcgc cggtcgcgac
      361 gatgatgtgc ttggccgtta gctccgtcgc cttaccgtcg gcgccagtca ccgacagctt
      421 gcccttcgcg gtgagcttcc cctcgcccat gtgaacggcg atcttgttct tcttcatcag
      481 cccggtgacg ccgcggttga gctggccggc gacgtcgcgg ctgcgcttga ccaccttgcc
      541 caggtcgaat ccgggctggc ccgccgacag cccgtaggcg tcggcgtgct tgatctggtg
      601 gaacacttcc gcggagcgaa gcagcgcctt ggtcgggatg cagccccagt tgaggcagat
      661 gccgccaagg ctttcgcgct cgacgatggc cgttttcagc cccagctggg cggcgcggat
      721 cgcggcgaca tagccgccgg gacccgaccc gaggacgacg acatcatatt gctcggccat
      781 tgcgatgctc cgggttgcgg tgccgccccc ttattgcatc gtccgaagat ggcaaacggt
      841 cacccccggg cttcgggtag gaatccttcg tcgacagggt cgctgaactt ggtggtccgg
      901 ctgtcgaact tcaggcgcac cttgccggtg gcgccgtggc gctgcttggc gacgatgact
      961 tcggcgcggc cgtaggcgcg gcccatctct tcctgccact cagcgaaatc gggatggtcg
     1021 tcggccggct gcttggcagc cagataataa tcctcgcggt agatgaagag gacgatgtcg
     1081 gcgtcctgct cgatcgaccc cgattcgcga aggtcggaga gctgcgggcg cttgtcctcg
     1141 cgctgctcga cggctcggct tagctgcgaa aggccgatga ccggcacgtt cagctccttc
     1201 gccagagttt tgagtccgcg gctgatctcg gagatttcct ggacccggtt gtcgttgccg
     1261 ttgcggcccg tcccctggag cagctgcaga tagtcgacga tgaccagtcc gacgcccttc
     1321 tgccgcttga ggcggcgggc tcgggcgcga agcgcggcga tcgtaaggcc gggcgtgtcg
     1381 tcgatgtaga gcggcaggct ctcgagggcg gccgccgccc gggcgagctc gcggaactcc
     1441 tgcttgctga tcttgcccat ccgcaaattt tcggagctga tccccgattg ctcggcgaga
     1501 atacgcgtcg ccagctggtc ggccgacatt tcgaggctga acagggcgac cgcggcaccc
     1561 gccgatttct ctgcctcgat gccgtcttcg gtgtcgcgga tgaatcgctg cgcggcggaa
     1621 aaggcgatat tggtcccgag cgccgatttt cccatgcccg gacggccggc gacgatgatc
     1681 aggtcgctgt tgtgcaagcc gccgatcttg ctgttgaggt tctccagccc ggtcgtcagg
     1741 ccggacaggt gcccgccgct gttgagagca cgctccgccg tctggagcgc ctcgcgcgtc
     1801 gcttcggcga agctcttcgc cttgccctcg gccccgcctt cctcggcgac cttgtaaagc
     1861 tcggtttcgg cgcgctcgat ctgctcgatc ggcgcaacct cttcgctggt gtcgagagca
     1921 ttctcgacta gctcgcgacc cacaccgatc agcgcccgga gaagcgccag gtcgtaaatc
     1981 tgctgggcga aatccttggc cgcgatcagt gccgcgcccg agccggtgag cttgccgaga
     2041 tagccggcac cgccgacttc cttcattgcc tcgtcggcct cgaacatcgg ccgcagggtc
     2101 accgggttgg cgaccatatt cttgtcggtg agcttgagga tcgcttcgta gatccgcgcg
     2161 tgaagctcct cgtgaaaatg gtgcggcttg agcttcagcc cgacgtcctc gaccagccgg
     2221 ttgtcgagca ttagggcgcc caa
//
LOCUS       DATAKH010000027        11135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_8341,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000027 DATAKH010000000
VERSION     DATAKH010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11135
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8341"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..481
                     /locus_tag="VHN55_00830"
     CDS             122..481
                     /locus_tag="VHN55_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX2802517.1"
                     /translation="MSNGQSPSEQQDRVFRALANSHRRAILDTLRDQPLTTGALCDLF
                     SDIDRCTVMQHLRVLEAAGLVQVERRGRERWNHLNPLPIHDIHERWIGPHAAYAVSIL
                     ARLKRDLQPVGKAGAKE"
     gene            569..1915
                     /locus_tag="VHN55_00835"
     CDS             569..1915
                     /locus_tag="VHN55_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802518.1"
                     /translation="MSAPIPEFEAGGSPDAGAFLDALNSLAPTERRKHATVFNYWHSI
                     RGNRDFPPIRDLDPLQISDAGPHSVLLGIIDEGADADIRHIGAAIKGSVQAERISEVQ
                     APSLLSCIAANLPAITGSKQPFAFEDVIDTDEGAIRCSVSLLPFSTTGESVDYVYGYV
                     SLAPADGPDEAAPEAEAPPAEMEPVEAVEETEEDSELLLQEVAPTAEDEPAIEPEPEE
                     PSNPGFSGRLSEKLKAAAGFYGRVADLELGAWKVEDPSDDPSSEEPLADEPEQVPEQV
                     VTEEPEQADPEPETIAQELEQAPQEPEEIIEEPEHAIEQAPPAESQSDGGLQSLLAAV
                     RSKADEARLAKLRSNVALYEGLGAAYDFALDAEHEPEDYLKLVEAKGLKIQLRAPMAP
                     VVKLAFSGMCDDSTIAQLEAVLAWAIKQDLPRGSLAERIQSEGGIAAIIDSIGKKA"
     gene            complement(1947..2432)
                     /locus_tag="VHN55_00840"
     CDS             complement(1947..2432)
                     /locus_tag="VHN55_00840"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2802519.1"
                     /translation="MSESVTRPEGQPERRRVHRIALRLNATIREPGRSRVGVRLIDIS
                     THGCRIESTAGASRDSWVLLSIAGLETQYCRIAWCCEEFAGLEFATPLAEPVLQRLLE
                     GQQDLSESSISELREIAARTSRLAAQRPESGDEGLAEFSRKCAVDAVVEGLRLGDALK
                     D"
     gene            2527..4191
                     /locus_tag="VHN55_00845"
     CDS             2527..4191
                     /locus_tag="VHN55_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010187196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX2802520.1"
                     /translation="MAKRTGGRILVDQLKINGCDRVFTVPGESFLAVLDALHDTPEIA
                     VTVCRQEGGVAYMADADGKMTGRPGIAFVTRGPGATNASGGIHVAFQDSTPMILFIGD
                     VARGDRGREGFQEIDFPAFFAPIAKWAARIDDARRIPEFIARAYRVATAGRPGPVVLA
                     LPEDMLRDQVEAADRPCVAPLSEAPDPGAIQALFELLKEAAAPAAIVGGADWSPRAAH
                     HFANFAYRHGIPVAAAFRRQDAIDNKCAVYAGQLGYGPNPKLQQRIRDADLILAVGAR
                     LGEATTDGYTLITPDHPGQTLVHVHPDPNELGRVYHADLPICADMGEFAEMVDEWIDP
                     ALVRFSCGEQAHKEWLDWSEPKPRKGVTLDLGPCVAAMRERLPENTIICNGAGNFSGW
                     WHRYWHYGPMPTQLAPTSGTMGYGVPAAVAAALRFTDRPVVAVAGDGDFLMNGQELAT
                     AAQYGCDLLVIVVDNSSYGTIRMHQEREYPKRISATGLDNPDFAALARAYGGWGETVE
                     TTQDFAPALEKALKKKGVRLIHCKTDVEQISNATTISDIRARSKRR"
     gene            complement(4188..4478)
                     /locus_tag="VHN55_00850"
     CDS             complement(4188..4478)
                     /locus_tag="VHN55_00850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802521.1"
                     /translation="MAEAEQPIAKSDVVVVNHGALGPYTSQSQDVEETVPHRRGSFHE
                     DWNDLLTRFAHRRKHDQPRAELLEKAQEEALKSELCEPFDPHQALFDRAHAD"
     gene            complement(4471..5196)
                     /locus_tag="VHN55_00855"
     CDS             complement(4471..5196)
                     /locus_tag="VHN55_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007684447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HEX2802522.1"
                     /translation="MIVATALAAAVLLAWAWLLRSPMADGSAMESMAMPREPLSAAYL
                     LPAFGMWAIMMVAMMVPSAAPMILLHARIDKAPSARARTAHTTLFALAYLLVWTLFSA
                     AAALAQAILVRSGIVTAAGLAVGSNTLAAGLLLTASAYELTAAKRVCLDKCQSPLVFM
                     LRRYRAGAAGAFRLGIVHGLYCLGCCWALMLLLFAGGVMNLAWVAVLGILVLGEKLVP
                     PSWRAERLVALALFIGAIALLLG"
     gene            complement(5249..5890)
                     /locus_tag="VHN55_00860"
     CDS             complement(5249..5890)
                     /locus_tag="VHN55_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007012442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HEX2802523.1"
                     /translation="MTDTKWTIKGREFVHCNCAYGCPCQFNALPTHGNCEAVVAVQID
                     EGRHGDTILDGLRIGAIVQWPGAVHEGRGQCVPIVDERADDNQREALLRIMSGLDTVE
                     GGTFFAVFATTYEKVHDPVFAPIELDIDIDGRSARVKIPGVMEARGEPIKNAVTGEES
                     RSRMQMPQGFEFDVAEVGRGWATTQGPVAIELSDSHAHFAELHMTENGVVHPA"
     gene            complement(5962..7281)
                     /locus_tag="VHN55_00865"
     CDS             complement(5962..7281)
                     /locus_tag="VHN55_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007014076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythromycin esterase family protein"
                     /protein_id="HEX2802524.1"
                     /translation="MADALVRELPDLIRSSAQPLPDIDDDRFAAFFDRFASARVVCLG
                     EASHGTSEFYRARAEISKRLIAHHGFNIVAVEADWPDAATIDRYVRHRQARKGERRAF
                     ERFPTWMWRNREFDTFIRWIRRHNRGRDYEHMTGFFGLDLYNMSMSMRAVIDFLEDAD
                     PEAAKVAKSRYGCLEPWAEEPQRYGANATHEGYGRCEVPVMQMMRDLMQRNFDCLSEE
                     CDEWLDAAANARLVKNAEKYYRVMYYGAAASWNLRDTHMFETLNQLLDAKGPKSKAIV
                     WAHNSHIGNAAFTEMGQVRGELNIGQLVKEKFDARARLIGFGTHTGTVAAADDWDEPM
                     QVKAVNPSLPDSYERASHDSRLPRFLIDLRAEEIGREIRESLMEPRLQRFIGVIYRPE
                     TERWSHYSRCILPRQYDGWVWFDETSAVTPLPGEQRPGEEETYPFGL"
     gene            complement(7274..7939)
                     /locus_tag="VHN55_00870"
     CDS             complement(7274..7939)
                     /locus_tag="VHN55_00870"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEX2802525.1"
                     /translation="MAETMTDFAAEREAMVQRQIESRGIRDPKILEAFRAVPREEFLS
                     GEYRDLAYGDHPLPIEAGQTISQPYIVALMIQAAEITPGDRVLEVGAGSGYAAAVMSR
                     IAGKVVAIERQSDLVKVAQERMKRFGYDNVEIVEGDGTRGWTAEAPFDAILAAASGSH
                     VPPAWVEQLADGGRIVMPVGEPGWVQKLVKVTKGPAGKLITEDLGAVRFVPLIGEEGW
                     SDG"
     gene            7990..8796
                     /locus_tag="VHN55_00875"
     CDS             7990..8796
                     /locus_tag="VHN55_00875"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2802526.1"
                     /translation="MQPVDIRFSGSVPANYERYMVPLLFRPYSRLLAERAAAFAPAKI
                     LETAAGTGVVTAALAEALPDAEIVATDLNQAMLDVAATRVSAPKVSFREADALQLPFE
                     NGSFDLVVCQFGVMFFPDKVAGNAEARRVLRDGGHYLVAIWDEIERNPLSHLAHRTMQ
                     ALFPDNPPMFMKRGPFSYGDSGQIRSDLQEAGFAEIRIDTVELKSRSPSAHDAAYGLT
                     YGSPMGVELAEYGGEALDRTFAKFAEGAKAMEGPEGFEAPMSAHIVTATK"
     gene            complement(8789..9809)
                     /gene="thiS"
                     /locus_tag="VHN55_00880"
                     /pseudo
     CDS             complement(8789..9809)
                     /gene="thiS"
                     /locus_tag="VHN55_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014500580.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
     gene            9943..10431
                     /gene="accB"
                     /locus_tag="VHN55_00885"
     CDS             9943..10431
                     /gene="accB"
                     /locus_tag="VHN55_00885"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017666133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEX2802527.1"
                     /translation="MAGPAKGGDKNGMRIDPALVKELADLLTENQLTEIEVEDGDRKI
                     RVQRLAGGAASAAHHAPQAAPMPQPMTAPPMHAEAAIGDVDGESVRSPMVGTAFLASE
                     PGADPFVKPGDTVKAGDTLLIVEAMKVMNPITAPRGGVVKQLLVENGQPVEFDQPLVL
                     LA"
     gene            10432..>11135
                     /locus_tag="VHN55_00890"
     CDS             10432..>11135
                     /locus_tag="VHN55_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012817173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEX2802528.1"
                     /translation="MPIQKLLIANRGEIALRIHRACHEMGIKTVAVHSTADSDAMHVR
                     LADETVCIGPPPATESYLNIPNIISAAEIVHADAVHPGYGFLSENAQFAEIVESHDIT
                     WVGPKPEHIRTMGDKIEAKRTAARLGLPLVPGSDGPIESIEDAKTLAKKIGYPVLIKA
                     ASGGGGRGMKVVPSEDQLESLISQASNEARSAFGDDTVYMEKYLADPRHIEFQVFGDG
                     AGNAIHLGERDCSLQRR"
BASE COUNT         2024 a         3804 c         3406 g         1901 t
ORIGIN      
        1 atcggccacg gcctcgaaca cctcgtgggg cggccgtccg acgatcatca tcaccttgaa
       61 tttcaggtcc atcgcgactc acctccttgc ggcacgagct tttatgttat atatttgtaa
      121 catgtcaaat gggcagtccc cgtcggaaca gcaggatcgc gtcttccgtg cgctggcgaa
      181 ctcgcaccgg cgggcgatcc tcgacacgct ccgcgaccag ccgctgacga ccggcgcgct
      241 gtgcgaccta ttttcagaca tcgatcggtg caccgtgatg cagcacttgc gggtcctcga
      301 ggccgccggc ctcgtccagg tcgagcggcg cggacgagag cgctggaacc acctcaaccc
      361 gcttccgatc cacgacatcc acgaacgctg gatcggcccg cacgcggcct atgcggtcag
      421 catccttgcg cgactgaagc gcgatctcca accggttggc aaagccgggg caaaggaatg
      481 aaagaaaagc gatatcccga gccggctttt aaccaattct aagaaccctt cggccgacac
      541 tgcttcgcag acgtgagcgg aggaacgaat gagcgcgccg attcccgaat tcgaagcagg
      601 tggaagcccg gatgccggag cgtttctcga tgcgctgaac agtctcgcgc ccacggagcg
      661 gcgcaagcat gccaccgtct tcaactattg gcattccatc cgcgggaacc gggatttccc
      721 gccgatccgc gacctcgacc cgctccagat ctccgacgcc ggtccgcaca gcgtcctgct
      781 cggcattatc gacgaaggtg ccgacgccga cattcgccac atcggtgccg caatcaaggg
      841 cagcgtccag gccgaaagga tcagcgaggt gcaggcacct tcgctcctgt cctgcatcgc
      901 tgcgaacctc cccgccatta ccggctcgaa gcagcctttc gccttcgagg acgtgatcga
      961 cacagacgag ggagcaatcc gttgctctgt cagcctcctc cccttcagca ccaccggaga
     1021 gtcggtcgat tacgtctacg gctatgtcag cctggcacct gccgacggcc ccgatgaagc
     1081 ggcacctgag gccgaagcgc cgcctgccga aatggaaccg gtcgaagccg ttgaggagac
     1141 cgaagaagat tccgaactcc tgctccaaga ggtcgcacct accgccgagg acgagccggc
     1201 tatcgagccc gaacccgagg agccgagcaa tcccggcttc tccggcaggc tgtccgagaa
     1261 gctgaaagcg gctgccggct tctacggccg ggtcgccgac ctggagctgg gcgcctggaa
     1321 ggtcgaagac ccgagcgacg atccgtcttc cgaggagccg ctcgccgacg agcctgagca
     1381 agtcccggaa caagtggtca ccgaggaacc ggagcaagcc gatccggagc ctgaaacaat
     1441 tgctcaggag ctcgagcagg ccccgcagga gcccgaggaa atcatagaag agccggagca
     1501 cgctatcgag caagcgccac cagccgagtc ccagtccgat ggcggcctgc agtcgctgct
     1561 cgcagcggtg cgcagcaagg cagacgaggc gcgcctggca aagcttcgaa gcaatgtcgc
     1621 gctctacgaa gggctgggcg cagcctatga tttcgcgctc gatgccgagc acgagccgga
     1681 ggattatctc aagctggtcg aggcgaaagg gctgaaaatc cagcttcgcg ccccgatggc
     1741 gccggtcgtg aagctcgcct tcagcggcat gtgcgacgat tcgacgatcg cgcaactgga
     1801 agcggtgctc gcctgggcga tcaagcagga cctgccgcgc ggatcgctcg cggagcgcat
     1861 ccagtccgag ggtggaatcg cggcgatcat cgacagcatc ggcaagaagg cctgaagacc
     1921 cgaaggccgg tcaggcgccc cggggactag tctttcaggg cgtctcccag acgcagtcct
     1981 tcgacgaccg cgtcgaccgc gcatttgcgc gaaaactcgg cgagcccctc gtccccgctt
     2041 tcgggccgtt gcgcggccag tcggctggtt cgggcggcga tttcgcgaag ctcgctgatc
     2101 gacgattcgg ataggtcctg ctgaccctcc agcaatcgct gcaggaccgg ctcggccaag
     2161 ggcgtcgcga attccagccc ggcgaactcc tcgcagcacc aggcgattcg gcaatattgg
     2221 gtttccagcc cggcgatact gagaaggacc caggaatcgc gggaagctcc cgcggtggat
     2281 tcgatccggc agccatgggt cgaaatgtcg attaggcgca ctcccacccg gctccggccg
     2341 ggctcgcgaa tggtcgcgtt gagccgcagc gcaatgcgat gcactcgcct gcgttcgggc
     2401 tgcccctcgg gtcgagtcac ggattcgctc atatgcccga caattgatgc gccgcgatgg
     2461 tgaacatttc ctttcgctcg catcggtgcg tgacgcgtca tttccttccc gctagagcgc
     2521 tccgccatgg caaagcgcac cggcggacgg attctcgtcg accagctgaa gatcaatggc
     2581 tgcgaccggg tcttcaccgt tccgggagaa agcttcctgg cggtgctcga cgctctccac
     2641 gacacacctg aaatcgccgt tacggtatgc cgccaggaag gcggggtcgc ctatatggcc
     2701 gatgcggacg gcaagatgac cggccggccc ggaatcgcct tcgtcacccg cggtccggga
     2761 gcgaccaacg ccagcggcgg catccatgtc gctttccagg attcgacgcc gatgatcctg
     2821 ttcatcggcg acgtcgcccg cggcgaccga ggccgcgaag gcttccagga gatcgacttc
     2881 ccggcctttt tcgcgcccat cgccaaatgg gcggcgcgga tcgacgatgc ccggagaatt
     2941 cccgaattca tcgctcgcgc gtaccgcgtc gcgaccgccg gccgtccggg accggtcgtt
     3001 ctcgctcttc cggaagacat gcttcgcgac caagtcgaag ccgccgaccg gccttgcgtc
     3061 gcacctctgt ccgaagcccc agatcccggg gcgattcagg ccttgttcga gctcctcaag
     3121 gaagcggccg ccccggcggc gatcgtcggc ggcgccgact ggagcccgcg cgcggcccac
     3181 catttcgcca acttcgccta ccgccacgga attcccgtcg ccgccgcctt tcgcaggcag
     3241 gacgcgatcg acaacaagtg cgcggtctat gccggccagc tcggctacgg tcccaatccg
     3301 aagcttcagc agcggatccg cgacgccgac ctgatcctcg ccgtcggcgc ccggctgggt
     3361 gaagcgacca ccgacggtta cacgctgatt acccccgacc atcccggcca gacgctcgtc
     3421 cacgtccacc cggacccgaa cgagcttggc cgggtttatc acgcggactt gccgatctgc
     3481 gccgacatgg gcgagttcgc cgagatggtc gacgaatgga tcgaccccgc cctcgtccgc
     3541 ttctcctgcg gagagcaggc gcacaaggaa tggctcgact ggtcggagcc gaaaccccgc
     3601 aagggcgtaa cgttagacct cggcccctgc gtcgccgcga tgcgggagag gctccccgag
     3661 aatacgatca tctgcaacgg cgccggcaat ttctccggct ggtggcaccg ctactggcac
     3721 tacggcccaa tgccgacgca actcgccccg accagcggga ccatgggcta tggggttccc
     3781 gccgcggtcg cagcggcgct ccgcttcacc gaccgcccgg tcgtcgcggt tgctggagat
     3841 ggcgatttcc tgatgaacgg ccaggagcta gcgacggctg cccaatatgg ctgcgacctg
     3901 ctggtcattg tcgtcgacaa ctccagctac ggcaccatcc ggatgcacca ggagcgggaa
     3961 tatccgaagc ggatttccgc gacaggcctc gacaatcccg atttcgccgc cctcgcccgc
     4021 gcctatggcg gctggggcga gaccgtcgaa acaacgcagg atttcgcgcc agcactcgaa
     4081 aaggcgctca agaaaaaggg cgtccggctg atccactgca agacggacgt cgagcagatc
     4141 agcaatgcca cgacgatttc ggatattcgc gcgaggtcga agcgccgtta gtccgcgtgc
     4201 gcacggtcga acagggcctg gtgcggatcg aagggctcgc acaattccga cttcaacgct
     4261 tcttcctgcg ctttttccag caactccgct cgcggctggt cgtgcttgcg ccggtgcgcg
     4321 aaacgagtca gcaaatcgtt ccagtcctcg tgaaagctgc cccttcggtg cggcacggtc
     4381 tcctccacat cctgcgactg tgaagtgtac ggcccgagcg cgccgtggtt cacgacaaca
     4441 acatccgatt tggcaatcgg ttgctcggcc tcagccaagc aggagcgcga ttgctccgat
     4501 gaagagcgcc aatgccacca gccgctcagc gcgccaggag ggcggaacca gcttttcgcc
     4561 cagaacgagg atcccaagca ccgcgaccca ggcaaggttc atcactccgc cggcgaacag
     4621 gagcagcatc agcgcccagc aacagccgag gcaatagagt ccatgaacga tcccgagacg
     4681 aaacgccccg gcggcgccgg cccggtagcg acggagcatg aacacaagcg gcgactggca
     4741 cttatcgagg cacactcgct tggctgcggt tagctcatag gcggaggcgg tcagaaggag
     4801 ccccgcggca agcgtattgc tgccgactgc cagccccgcg gcggtgacaa ttcccgatcg
     4861 gacgagaatc gcctgggcga gcgcggccgc tgccgaaaac agggtccaga caagcaggta
     4921 agcgagcgcg aacagcgtcg tgtgagctgt ccgcgcccgg gcagacggcg ccttgtcgat
     4981 tcgcgcgtgg agaaggatca tcggcgccgc agacggcacc atcatcgcca ccatcatgat
     5041 cgcccacatg ccgaatgcgg ggaggaggta ggccgcggaa agcggctctc gtggcatggc
     5101 catcgattcc attgccgatc cgtccgccat cggtgagcgc agcagccacg cccacgcgag
     5161 aaggacggcc gccgcgagcg cggtggcgac gatcacgctg tcgcgggaaa gcaagctttt
     5221 gagtggcgca gcgcctgcgc cggattgctc aggcggggtg gacgacaccg ttctcggtca
     5281 tgtgcagctc ggcgaaatgc gcatggctgt cgctaagctc tatcgccacc gggccttgag
     5341 tcgtcgccca gccgcggccc acctccgcaa cgtcgaattc aaagccctgc ggcatctgca
     5401 tccggctgcg gctttcttcg ccggtcacgg cgttcttgat cggctccccg cgcgcttcca
     5461 tcacccccgg gatcttcact cgcgccgagc ggccgtcgat gtcgatgtcc aactcgatcg
     5521 gagcgaagac cgggtcgtgt actttctcat aagtggtcgc gaacaccgcg aaaaacgtcc
     5581 cgccttcgac cgtgtcgagg ccgctcatga tccgcagcaa agcctcgcgc tggttgtcgt
     5641 cggcgcgttc gtcgacgatc gggacgcact ggccgcggcc ttcatggacg gctcccggcc
     5701 attgcacgat tgctccgatc ctcaatccgt cgagtatcgt gtcgccgtgc cgcccctcgt
     5761 cgatctggac cgcgaccacc gcctcgcaat tgccatgcgt gggaagcgcg ttgaactggc
     5821 acgggcagcc gtaggcgcag ttgcaatgaa cgaactcgcg ccctttgatt gtccacttgg
     5881 tatcggtcat cgggccctcc tgtcgccagg gtcatagcag aagccgcggc gccgtttaac
     5941 cgttactgct tccggtccgg gtcacagccc gaacgggtaa gtctcctcct cgcccggccg
     6001 ctgctcgccc ggaagcggcg tcaccgcact ggtttcgtcg aaccacaccc agccgtcgta
     6061 ctggcgcggc aggatgcagc gggaataatg gctccatcgc tccgtctccg ggcgataaat
     6121 cacgccgatg aagcgctgca gccgcggttc catcagcgat tcccggattt cgcgcccgat
     6181 ttcttccgcc ctgaggtcaa taaggaagcg cggcaaccgg ctgtcgtgcg atgcgcgctc
     6241 atagctgtcg ggaagcgacg ggttcaccgc cttcacctgc atcggctcgt cccagtcgtc
     6301 cgccgccgcg acggtgccgg tgtgggtgcc gaagccgatc agccgcgccc tggcgtcgaa
     6361 cttctccttc accagctggc caatgttcag ctcgccgcga acctgcccca tctcggtaaa
     6421 agcggcgttg ccgatatggc tgttgtgcgc ccacacgatc gccttggact ttggcccctt
     6481 ggcgtcgaga agctggttga gcgtctcgaa catgtgcgtg tcgcgcaggt tccagctcgc
     6541 ggcggcgcca tagtacatca cgcgataata tttctcggca ttcttcacga gccgggcatt
     6601 ggcggcggcg tccagccact cgtcgcattc ttccgaaagg cagtcgaagt tgcgctgcat
     6661 caggtcgcgc atcatttgca tgaccgggac ttcgcagcgc ccatagccct cgtgggtcgc
     6721 gttcgcgcca taacgctgcg gctcttcggc ccagggctcg aggcagccgt agcgtgactt
     6781 tgccactttc gccgcttcgg gatcggcgtc ttcgaggaaa tcgatcacgg cccgcatcga
     6841 catgctcatg ttgtagaggt cgagcccgaa aaagccggtc atatgctcgt agtcgcggcc
     6901 gcggttgtgg cggcggatcc agcggatgaa tgtgtcgaat tcccggttac gccacatcca
     6961 ggtcggaaag cgctcgaacg ctcgtcgctc gcccttgcgc gcttggcgat gccggacata
     7021 gcggtcgatc gtcgccgcgt ccggccagtc cgcctcgacg gcgacgatgt tgaagccgtg
     7081 gtgggcgatc agccgcttcg aaatttccgc ccgtgcccga tagaattcgc tcgtcccgtg
     7141 actggcctcg ccaaggcata cgacgcgtgc gctcgcgaag cggtcgaaaa aggcggcgaa
     7201 acggtcgtcg tcgatgtcgg ggagaggctg ggccgacgag cggatcaggt ccggcagctc
     7261 gcggacgagt gcgtcagcca tcgctccacc cttcctcgcc gatcagcggc acgaaacgga
     7321 ctgcgccgag gtcctcggtg atcagcttgc ccgccggccc cttcgtcacc ttgaccagtt
     7381 tctggaccca gcccggctcg ccaaccggca tgacgatccg cccgccatcg gccagctgct
     7441 cgacccaggc cggaggcaca tggcttccgc tcgctgcggc gagaatcgca tcgaacgggg
     7501 cctccgcagt ccagccgcgg gtgccgtcgc cctcgacgat ctcgacattg tcgtagccga
     7561 accgcttcat ccgctcctgg gcaaccttca ccaggtcgct ttgccgttcg atcgcgacca
     7621 ccttgccggc gatccggctc atcaccgccg ccgcatagcc cgagcccgcc cctacctcga
     7681 gcaccctgtc gcccggcgtg atctcggcgg cctggatcat cagcgccacg atgtaaggct
     7741 gggagatcgt ctgcccggcc tcgatcggaa gcgggtgatc gccataagcg agatcgcgat
     7801 actcgcccga gaggaactcc tcgcgaggaa ccgcccggaa cgcttcgagg atcttggggt
     7861 cgcgaatgcc gcggctttcg atctgccgct ggaccatcgc ctcgcgttcg gcggcgaagt
     7921 ctgtcatggt ttcggccatg tgccaccacc tctgagtgta aactcgaatc gcgggagggc
     7981 cgttccaaga tgcagccggt cgacatccgc ttttccgggt cggtcccggc caattacgaa
     8041 cggtacatgg tgccgctcct gttcaggccc tactccaggc ttttggcgga gcgcgcggcg
     8101 gcattcgcac ccgctaaaat cttggaaacg gctgctggaa ccggagtcgt gacggcggct
     8161 cttgccgaag ccttgcccga tgccgagatc gtcgcgaccg acctcaacca ggccatgctc
     8221 gacgttgcgg cgacacgcgt ctcggctcca aaagtctcgt tcagggaagc ggacgcgctc
     8281 cagctaccgt tcgaaaacgg cagcttcgac ctggtcgtct gccagttcgg cgtgatgttt
     8341 tttcctgaca aggtcgccgg caatgccgag gcgcggcgag tgctgcgcga cggcggccat
     8401 tatctcgtcg ccatctggga tgagatcgag cgcaatccgc tgtcgcatct cgcccaccgc
     8461 acgatgcagg cgctgttccc agacaacccc ccgatgttca tgaagcgcgg gccgttcagc
     8521 tacggcgatt ccgggcaaat ccgaagcgac cttcaggaag ccggtttcgc cgaaatccgc
     8581 atcgataccg tcgagctgaa gagccgcagc ccctcggctc acgatgcggc ctacgggctg
     8641 acctatggat cgccgatggg ggttgagctt gccgaatatg gcggcgaggc tctcgaccgg
     8701 accttcgcga aattcgccga aggtgcgaaa gccatggaag gccctgaggg gttcgaggcg
     8761 ccgatgtcgg cgcacatcgt cactgcgact aaatgagtcc cgccagcggg ctgctcgggt
     8821 cggcgtagcg ccgcttgccc atgcgtccgg agaggtaggc gagccgcccc gcctcgaccg
     8881 ccgatttcat cgcccgcgcc atcatcaccg ggtccttcgc ttcggcgatt gcggtgttca
     8941 tcagcacccc gtcgcaaccg agctccatcg caaccgccgc gtcgctcgcg gtgccgactc
     9001 cggcatcgac cagcaccggc acgcctgcgc cttcgacgat cagacggatg gtgacgaggt
     9061 tctgtatccc gagacctgat ccgatcggcg ccccaagcgg catgatcgcc accgcgcccg
     9121 cttcctctaa ctgcttcgcg gcaatgggat cgtcgacgca atagaccata ggctcgaagc
     9181 cctctttgac gagggtctcg gtcgccttca gcgtctcgcg catgtcggga taaagggtcc
     9241 gcgcttctcc aagcacctcc agcttcacca gattccaccc gcccgcttcg cgcgccagcc
     9301 gaagcgtccg caccgcgtcg tcggcggtaa agcagccggc ggtattgggg agatacgtca
     9361 ccttcttcgg gtctatgaag tcggtcagca tcggctgctt ggggtcggcg atgttcaccc
     9421 gccgaaccgc gaccgtgacg atctccgcgc cgctagcttc caccgcggcg gcattctcgg
     9481 cgaaatcctt atatttgccg gtgccgacga tcagccgcga cgaaaaggtc cttcccgcca
     9541 cagtccatgt gtcggatttc acctgtccgg gagcgttcac ctcaaccgcc cccgacgaaa
     9601 tggacgatct cgaaggcgtc gccgtcgctc acctgcacct cgccaagcgt tgagcgcggc
     9661 accacttcga gattgcgctc caccgcaacc ttgcgggggt cgagcccgat cgcttccagc
     9721 atcgccgcga tgctgctttt cgcggggaca gccctgggct cgccgttgac gactacggaa
     9781 atcatctctt cctgaagtgt ttcagccatt tatcccaatg cgctttgtcg attgccttct
     9841 cgctcatata gagccgcgcc gagccgatgc cacccgtgcc gggctggacg cggcggcaag
     9901 gctctgcaag ggcagcgcgc ctgactgaat aggggagtgt tgatggccgg accagccaag
     9961 ggcggcgaca agaacgggat gcgtatcgat cctgcgctcg tgaaggagct cgcggatctc
    10021 ctgaccgaga accagcttac cgagatcgag gtcgaggacg gcgaccggaa aatcagggtc
    10081 cagcggctcg ccggaggcgc agcttcggcc gcgcaccacg cgccccaggc cgctccgatg
    10141 ccgcagccaa tgaccgctcc gccgatgcat gccgaagctg ccatcggcga cgtcgacggc
    10201 gaaagcgtcc gctcgccgat ggtcgggacc gctttcctcg cctccgagcc cggcgccgac
    10261 ccgttcgtga agcccggcga cacggtgaag gccggcgaca cgcttctgat cgtcgaggct
    10321 atgaaggtga tgaacccgat caccgccccg cgcgggggag tcgtcaagca gctgctggtc
    10381 gagaacggcc agccggtgga gttcgaccag ccgctggttc tcctggccta aatgcccatc
    10441 caaaagcttc tcatcgccaa ccgcggcgaa atcgcgctca ggattcaccg cgcctgccac
    10501 gaaatgggca tcaagacggt cgcggtccat tcgaccgccg acagcgacgc gatgcacgtc
    10561 cgcctcgccg acgaaaccgt gtgcatcggg cctccgcccg cgaccgaatc ctacctcaac
    10621 atccccaaca tcatctccgc ggccgagatc gtccacgccg acgcagtcca ccctggctac
    10681 ggcttcctgt ccgagaacgc acaattcgcc gagatcgtcg aaagccacga catcacctgg
    10741 gtcggcccca agcccgagca tatccgcacc atgggcgaca agatcgaggc caagcgcacc
    10801 gccgccaggc tcggcctacc cctggtcccg ggctccgacg gtccgatcga aagcatcgaa
    10861 gacgccaaga ccctcgccaa gaaaatcggt tacccggttc tgatcaaggc ggcctcgggc
    10921 ggcggcggtc ggggaatgaa ggtggttccc tccgaagacc agctcgaaag cctgatcagc
    10981 caggcgtcca acgaggcccg ctccgccttc ggcgacgaca ccgtctacat ggagaaatat
    11041 ctcgccgacc cgcgccacat cgaattccag gtcttcggcg acggcgccgg aaacgcaatc
    11101 cacctcggcg aacgcgactg ctcgctccag cgccg
//
LOCUS       DATAKH010000028         9112 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35726,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000028 DATAKH010000000
VERSION     DATAKH010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9112
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35726"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(236..1819)
                     /locus_tag="VHN55_00895"
     CDS             complement(236..1819)
                     /locus_tag="VHN55_00895"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2802529.1"
                     /translation="MRKATSTAVHLASSHVIVTCATLAAIILFVGLGSQVIPSALSGV
                     PLPPSSSMAKVAFLLNIAIILFGWRRSKDLAEALKAYEEAQSAANRNANTDSTTGLDN
                     RRQFVRALAEAVGRRSKGALLLLDLDHFKRVNDLHGHFVGDELLRRVAGILREAAPDA
                     QSIARIGGDEFTVLLTEATAAQAEAVASEILSALRSPVEVDNTRAQVSTSVGLATLQG
                     CSSGEMVLRRSDVALYAAKGQGRNRLAWFDKELERELSERIQFEEDLRSGIERSEFLP
                     FFQPLIDLNSRELVGFEALARWDSPTRGLLDAERFIEPAERSGLIGPIGFMVFEKALQ
                     EAGNWPAHLKLAVNISTAQFRDHTLAEQIVKLLTVHGFPARRLELEISEATVLENREQ
                     ALAIVGSLRNLGISISLDDFGTGYASLARVQELPLDRIKIDKSFINAIVKSDRTAAIV
                     ETIANLGHTLKVPITAEGVESERIREALDGLGCTEAQGWLFGRAISAEAVHAFLSAKD
                     TAEMSERFASSGGRSARLK"
     gene            complement(1947..4187)
                     /locus_tag="VHN55_00900"
     CDS             complement(1947..4187)
                     /locus_tag="VHN55_00900"
                     /inference="COORDINATES: protein motif:HMM:NF020137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M10 family metallopeptidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2802530.1"
                     /translation="MIKHGTTDATLLWSRTDSSTAISVSLSPKLYDAFPIDGVGDLKP
                     VSTTAVLLLTADSVGDDISTTHSVSVDGDHVVSTIDTLGDQDFFRVELEAGRTYEIGQ
                     YLVTGGPSGVPLSDAYLEIYDSAGNLLASEDGGGPNTPSGLDALMTFAPQASGTYYIN
                     ARAFDQDGTNGTTGDAVGDYELFVDDVTDQPHYVPYYDINSPLHSIDWGTQVDRTSRN
                     PDGEEGPRVTGNAFTGVGWNPYGIEGKNVITVYFAKAGDVFVSEDPLNPGLTTTIVAK
                     GMADWEKQAFWNALHLYEDVADIVFVEVNTRAEADFKFITYIGTPGAGASLLGRMSPP
                     GEDNEGQAEFNAGDVRWTEEGLQPGGFYFPTIFHEIGHGMGMAHPHDDGGQSSVMRGG
                     GGGTAGIGGGLGDFNLSQQVYTVMSYNDGYSSSPYGQPRSGGITGAEVDHYGWVASLS
                     PLDIAVIQDKYGVNEDTATGDDTYLIKDFNGPGNFYSSIWDAGGTDVIAYEGAGDANI
                     DLRAATLAYEEGGGGRVSDVWGIYGGFTIANGVTIENARSGTGNDTLTGNEAANRLES
                     GAGNDSLAGNGGDDVLVGGAGSDVMTGGAGADLFVFTSDGDSTPGAGRDIITDFTQGS
                     DVIDLSELNASTFVGSALFSGNAGEVRFAAFGGATIVELDSNGDGLADFQLEVQGQAG
                     LSFADFAGLEIDGTARTAGGGGGGKKLGHDKPGSGSLAVGYDDGLTSGPLAPEHHEAH
                     YAYDYL"
     gene            4572..5738
                     /locus_tag="VHN55_00905"
     CDS             4572..5738
                     /locus_tag="VHN55_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HEX2802531.1"
                     /translation="MTLTISSAFDAGNIRVLEQGGDSADLEIVKDHMSDFYQWFYFRV
                     AGGKGCEVTLRIVNCGGSAYPHGWPDYRACVSSDRDEWLRIDGTSYADGTLTIRFAPD
                     ADVVWIAYFAPYSMERHHDLVTSVASLPGVTYSSLGKSLDGQDIDCLTLGEGPLNVWL
                     YARQHPGESMAEWWMEGALEKLTDLDDPVVRVLRRECTFRVVPNMNPDGSRRGHLRTN
                     AVGVNLNREWHAPSAEKSPEVLWVRNAMDESGVDFAMDVHGDEAIPANFLAGFEGIPS
                     LTDRQTGLFKLFSETLERVSPDFQTRQGYEIPKPGEANMSMSTTQLAERYGCVSMTLE
                     MPFKDNFDLPDAVYGWSPERSKHLAAACMDSLHAILPDLKTATADRPKAEKVDA"
     gene            5731..6417
                     /gene="gpmA"
                     /locus_tag="VHN55_00910"
     CDS             5731..6417
                     /gene="gpmA"
                     /locus_tag="VHN55_00910"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010185723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004619 - phosphoglycerate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEX2802532.1"
                     /translation="MPSLVLLRHGQSQWNLANRFTGWWDVDLSEKGVAEASAAGELMK
                     RHGFDFDICFTSVLTRAIKTLNLALEPMDRLWLPVRKHWRLNERHYGGLTGLNKQEMR
                     DKVGDEQVKIWRRSFDIPPPPLEAESEYDVAGDRRYAGVDVPDTESLKDTIERVLPYW
                     DEAIAPALKSGERVLISAHGNSIRALVKHLSNVGDDDIVGVEIPTGEPLVYELNDDLS
                     ARESYYLSER"
     gene            complement(6414..6989)
                     /locus_tag="VHN55_00915"
     CDS             complement(6414..6989)
                     /locus_tag="VHN55_00915"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX2802533.1"
                     /translation="MQGDAESLDMDAQAEIARLKEKIAQLEERVRHLDELAHQDPLVP
                     VPNRRGFLRQLDALIGRVSRYGESAAMLFVDIDGLKQINDSLGHKAGDEALVQVANTL
                     TAGVRRSDCVARLGGDEFGVLLAHASEDSARETAERLTALIDERDSQCDGKPLPLSVA
                     IGITIIGAGDTAEQVIARADRAMYDRKSAAA"
     gene            7111..7593
                     /gene="purE"
                     /locus_tag="VHN55_00920"
     CDS             7111..7593
                     /gene="purE"
                     /locus_tag="VHN55_00920"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010339039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEX2802534.1"
                     /translation="MAGPQVGIIMGSKSDWETMRHAAEMLDSLGIAHETKVVSAHRTP
                     KRLYDYAHGARERGLKVIIAGAGGAAHLPGMAASMTTLPVLGVPVETQSLKGMDSLLS
                     IVQMPAGVPVGTLAIGRAGAVNAALLAASILAVADPKLAGRLDEHRASQTASVAETPE
                     "
     gene            7590..8648
                     /locus_tag="VHN55_00925"
     CDS             7590..8648
                     /locus_tag="VHN55_00925"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010339040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEX2802535.1"
                     /translation="MTIAPGGTIGIIGGGQLGKMLAVAAAQLGYTCHIFEPGESPCAA
                     DVAARFTRADYDDVEALRRFADGVDVATYEFENVPAKSLDVIASKLRPGVASLQVGQH
                     RGREKEFIEGTGARVGPWMRVDSEADALEAERRLGAPLVLKTRRLGYDGKGQAWAQQA
                     GSVVEAWDAIGREPAVAEARIDFDCEFSVVLARGADGAIATWDLPLNDHENGILRRST
                     VPAGDAVERHHGEAVAVATKIAETLGHIGVLTVEFFATADGPIVNEIAPRVHNSGHWT
                     IEGAVTSQFEQHIRAICGLPLGSTARVGSSAVMENLLGDEIEGWPRLVAEPEAHVHLY
                     RKGNHRPGRKMGHVTRIS"
     gene            8707..>9112
                     /locus_tag="VHN55_00930"
     CDS             8707..>9112
                     /locus_tag="VHN55_00930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802536.1"
                     /translation="MRHLAVLLPLTFLAAAPLAAAEPVAVPSFRSIELRGGGNVIVRP
                     GPARVTILEGSSRFTRFAVDRQGQLKIDACNAQCPRNYDLTIEIRYPTVLPMGVKGGG
                     TITAESGFGPQQSVAAGVGGGGLIDLRSVTART"
BASE COUNT         1548 a         3027 c         2924 g         1613 t
ORIGIN      
        1 ccaggactgg gagtttgggc attggcgttg gctagcgaag cggcgtcgct cgcgccagca
       61 ttctcgatga gcgccggctc agaagatcgc gtcgagcagc ccgaacacga ccaatagccc
      121 gatgacgaag acgaataaga ctatgcagcc aatggccctg agcaccggca agctccttcc
      181 tgattgaatt ctcgggaaca tctacgaggg gccggctgcg gagttccggg cggacctact
      241 tcaatcgcgc ggatcgccct cccgagcttg cgaaccgttc cgacatctct gcggtatcct
      301 tggcgctcag gaaggcatgc accgcttcgg ccgagatcgc gcggccgaac agccatccct
      361 gcgcttcggt gcagccgagg ccatcgagcg cctcgcgaat gcgctccgat tccacgccct
      421 ccgcggtaat cgggaccttc aacgtatggc cgagattggc gatggtctcc acgatcgcgg
      481 cggtgcggtc gctcttcacg atcgcgttga tgaagctctt gtcgatcttg atcctgtcca
      541 gcgggagttc ctgcacgcgc gcaagtgacg catagccggt cccgaaatcg tcgagcgaaa
      601 tgctgattcc gaggttcctg aggctgccga cgatggccag cgcctgttcg cggttttcga
      661 gcacggtggc ctcgctgatc tccagctcca gccgccttgc cggaaagcca tggaccgtga
      721 gcagcttgac gatctgctcc gctagcgtgt ggtcgcggaa ttgggctgtg gagatattca
      781 ccgcgagctt gaggtgggcg ggccaattcc cggcttcctg cagcgccttt tcaaacacca
      841 tgaatccgat cggaccgatg aggccgcttc gctctgccgg ctcgatgaac cgctcggcgt
      901 cgagcaagcc gcgagtcggg gagtcccacc ttgccagcgc ttcgaagccg acgagctcgc
      961 gactgttgag gtctatcagc ggctggaaga acggcaggaa ctcgctgcgt tcgatgccgc
     1021 tgcggaggtc ttcctcgaac tgaatgcgct cggacagctc gcgctccagt tccttgtcga
     1081 accatgccag gcgatttcgg ccctggccct tggcggcgta aagggcgaca tcgctccgcc
     1141 ggagcaccat ttcgccgctg ctgcagccct ggagcgtggc cagcccgacc gacgtagaga
     1201 cctgcgcgcg cgtgttgtcg acctcgacag gggaccgaag cgccgacagg atttctgaag
     1261 ccacggcttc ggcctgcgcc gcggtcgcct cggtcaggag cacggtgaat tcgtcgccgc
     1321 cgatgcgcgc gatagactga gcgtccgggg ctgcttctct aaggatgccc gcgacccgcc
     1381 gaagcagttc gtcgccgacg aaatgcccgt ggaggtcgtt cactcgcttg aagtggtcga
     1441 gatcgagcaa cagcagtgcg cccttgcttc gccgtccgac tgcttcggca agcgcccgga
     1501 cgaattgccg gcgattgtcg agcccggtgg tcgaatcggt gttcgcgttg cgattggcgg
     1561 cactctgcgc ctcctcatat gccttcagcg cctcggccag gtccttcgat cgccgccagc
     1621 cgaacaggat gatcgcgatg ttgaggagga aggcgacctt ggccatgctc gaagagggcg
     1681 gcagaggcac gcccgagagc gccgagggaa tgacctggct gccgagcccg acgaaaagga
     1741 tgattgccgc cagcgtcgcg catgtgacga tgacgtgact gcttgcaagg tgaactgccg
     1801 tacttgtcgc tttacgcacg tctcgagcgt ccttcgtgat gctcggaccg acctagagaa
     1861 aatatgttaa ttcccggcaa acacggcgcg ccggtcatcg cctggggcga ggcgcgacga
     1921 gtgtgtcgag cctcgcccgc cgacgatcac agatagtcgt atgcgtagtg cgcctcgtgg
     1981 tgctccggcg ccagcggacc ggaggtcagc ccatcgtcgt accccacggc cagcgaaccg
     2041 ctacccggct tgtcgtggcc tagcttcttg ccgcctccgc cgccgccggc cgtcctggcg
     2101 gtaccgtcga tctcgaggcc ggcaaagtca gcgaacgaca ggccagcctg tccttgcacc
     2161 tccagttgga agtcggcgag cccatcgcca ttggagtcga gctcgacgat cgtcgctccg
     2221 ccgaacgccg caaagcgcac ttcgccggca ttgccggaga acagtgccga cccgacgaat
     2281 gtggatgcgt tcagctccga caggtcgata acgtcgctgc cctgcgtgaa gtcggtgatg
     2341 atatcccggc cagctcctgg cgtgctgtct ccgtcgctcg tgaaaacgaa caggtcggca
     2401 cccgctccgc cggtcatgac atcgcttccc gcaccgccga cgagcacatc gtcgccgcca
     2461 ttgccggcca ggctgtcgtt cccggcgccg gactcgagcc ggttcgccgc ctcgttgccg
     2521 gtcagcgtgt cgttgccggt cccgcttcgg gcattctcga tcgtgactcc gttggcgatg
     2581 gtgaagccgc catagatgcc ccagacgtcg gaaacccggc cgccgccgcc ttcctcgtac
     2641 gcgagcgtcg ccgcccgaag gtcgatattg gcgtcgccgg cgccctcata ggcgatgacg
     2701 tcggttccgc ccgcatccca gatggaggaa tagaagttgc cggggccgtt gaagtccttg
     2761 atcaggtagg tgtcgtcgcc ggtcgcggta tcctcgttga ctccatattt gtcctgaata
     2821 acggcgatgt cgagcgggct cagcgatgcg acccagccat aatggtcgac ctcggcgccg
     2881 gtgattcctc cggatcgggg ctggccataa ggcgagcttg aatagccgtc gttatacgac
     2941 atgacggtat agacctgctg gctgagattg aagtcgccca gcccgccacc gatgcccgca
     3001 gtgccgccgc cgcctccgcg catgacgctg gactggccgc catcgtcgtg cgggtgcgcc
     3061 attcccatgc cgtggccgat ttcgtggaag atggtcggaa aatagaagcc gccgggctga
     3121 agcccttctt cggtccagcg gacgtcgccg gcgttgaact cggcctggcc ttcattgtcc
     3181 tcgcccggcg ggctcatccg ccccagaagc gatgcgccgg ccccgggggt tccgatatag
     3241 gttatgaact tgaagtcggc ctctgctcgc gtgttcacct cgacgaagac gatgtcggcg
     3301 acgtcctcgt aaaggtgaag cgcgttccag aacgcctgct tctcccagtc cgccattccc
     3361 ttggcgacta tcgtcgtggt caggcccggg ttgagcgggt cttcggagac gaagacgtcg
     3421 ccggccttcg cgaaatagac ggtgatgacg ttcttgccct ctattccata ggggttccag
     3481 ccgactccgg tgaacgcatt gccggtgact cgcggccctt cttcgccgtc ggggttgcgg
     3541 gaggtgcggt ccacctgcgt tccccagtcg atcgaatgaa gcgggctgtt gatgtcgtaa
     3601 taggggacgt agtgcggctg gtcggtaacg tcgtcgacga acagctcgta gtcgccgacc
     3661 gcatcgccgg tggttccgtt cgtgccgtcc tggtcgaacg cgcgggcatt gatgtaataa
     3721 gtgccactcg cctgcggagc gaaagtcatc agggcgtcga ggccggaggg cgtgttcggc
     3781 ccgccgccat cctcggaagc aagcaggttg ccggcggaat cgtagatttc caaataggca
     3841 tcggacagcg gcacgccgct gggcccgccg gttaccagat actggccgat ttcgtacgtc
     3901 cttccggctt ccagttcgac cctgaagaag tcctggtcgc cgagggtgtc gatcgtcgac
     3961 accacatggt cgccgtcgac cgagacactg tgggtagtgc tgatgtcgtc gccgacgctg
     4021 tcggccgtca ggaggaggac tgcggtcgtg ctcaccggct tcaagtcacc gactccgtcg
     4081 atcgggaagg cgtcgtacag ctttggactg agcgagacgg aaatggcggt gctgctgtcg
     4141 gtgcgggacc acagcagagt ggcatcggtc gtaccgtgct tgatcattca actctcccta
     4201 agcggcagtg cagccgacgc tctccggagc cggaggggtg tccctcgcgg cggtcgtgat
     4261 cctgtcggct ggggtgggca agggcatggg ccttggggct catgcggggc gcatttcggg
     4321 gcatcgaaca ttccttcgag gagccgaaac ggcgccagcc caagtgcaac gacctgtcgc
     4381 aggcggtttg ctcatgcgtt tacgacgact cgggccgcag tggcgatgag ccgagacgag
     4441 cgccgcagct cggcccaaaa ccgacaccgt ccggagtgga gaccgcgcga gggttaacgg
     4501 gcgggtttgc ctgaccggcg gcctggcact atcagcctcc gcaacttgca accgcagttc
     4561 tcaaggattc catgaccctc acaatttcga gcgcgttcga cgccggcaat atccgcgtgc
     4621 tggaacaggg cggcgacagt gccgacctgg aaatcgtcaa ggaccacatg tccgacttct
     4681 accaatggtt ctatttccgc gtcgccggcg gaaagggctg cgaagtgacc ctacggatcg
     4741 tcaattgcgg cggctccgcc tacccgcacg gctggcccga ctatcgcgcc tgcgtttcgt
     4801 cggaccggga cgaatggctc cggatcgacg gtactagcta cgcagacggc acgctcacca
     4861 tccgcttcgc tccggacgcc gacgtcgtct ggatcgcgta tttcgcgcct tattcgatgg
     4921 agcggcatca cgatctcgta acctcggtcg cctcgcttcc gggcgtgacc tattcgtcgc
     4981 tcggaaagtc gctcgacggg caggacatcg actgcctgac cctgggcgag gggccgctca
     5041 acgtctggct ctacgcccgc cagcaccccg gcgaatcgat ggccgaatgg tggatggaag
     5101 gcgctctcga aaaactgacc gacctcgacg atcccgtggt tcgcgtgctc cgcagggagt
     5161 gcaccttccg tgtcgtgccc aacatgaatc cggacggttc gcgccgcggc catcttcgca
     5221 ccaacgccgt cggagtgaac ctcaaccgcg aatggcacgc gccgtcggcg gaaaagagcc
     5281 cggaagtgct gtgggtccgc aatgcgatgg acgaatcggg cgtcgatttc gcgatggacg
     5341 tgcatggcga cgaggcgatc ccggcaaact tcctcgccgg tttcgagggc attccctcgc
     5401 tcaccgaccg ccagaccgga ctgttcaagc tgttcagcga gacgctcgag cgggtatcgc
     5461 ccgatttcca gacccgccag ggctatgaga ttcccaagcc gggcgaagcc aatatgtcga
     5521 tgtcgaccac ccagctggcc gagcgctacg gctgcgtatc gatgacgctg gagatgccgt
     5581 tcaaggacaa tttcgacctc cccgacgcgg tctacggctg gtcgccggag cggtcgaagc
     5641 atcttgccgc cgcctgcatg gactcgctgc acgccatcct tccggatctg aagaccgcga
     5701 ccgccgacag gccgaaggcc gaaaaggtcg atgcctagcc tcgtcctcct ccgccacggc
     5761 cagtcgcagt ggaacctcgc caaccgcttc accggctggt gggacgtcga cctgtcggaa
     5821 aagggcgtcg ccgaagccag cgcagccggc gagctgatga aacgccacgg cttcgacttc
     5881 gacatctgct tcaccagcgt cctcacgcgg gcgatcaaga ccctgaacct ggctcttgaa
     5941 ccgatggacc ggctgtggct tccggtgcgc aagcactggc ggctcaacga gcgccactac
     6001 ggcgggctga ccggcctcaa caagcaggag atgcgcgaca aggtcggcga cgagcaggtc
     6061 aagatctggc gccgctcgtt cgacatcccg ccgccgccgc tggaggccga aagcgagtat
     6121 gacgtcgccg gcgaccgcag gtacgcgggc gtcgacgttc ccgatacgga aagcctaaag
     6181 gacacgatcg agcgcgtcct tccctattgg gacgaagcga ttgcacctgc actcaagagc
     6241 ggcgagcggg tgctgatcag cgctcacggc aattcgatcc gggccctggt caagcatctg
     6301 tctaacgtcg gcgacgacga catcgtcggg gtcgaaatcc cgaccggcga accgttggtc
     6361 tacgagctga atgacgacct cagcgcccgc gagtcctatt atctgagcga gcgctaggcc
     6421 gccgccgact tgcggtcgta catcgcgcgg tcggcgcggg cgatcacctg ctcggcggtg
     6481 tcgccggcac cgatgatcgt gatcccgatg gcgacgctga gcggcagcgg cttgccgtcg
     6541 cactggctgt cgcgctcgtc gatcagcgcc gtcagccgct cggcggtttc gcgggcgctg
     6601 tcctcgcttg catgggcgag aagcacgccg aattcgtcgc cgccgaggcg ggcgacgcaa
     6661 tcgctgcgcc gaaccccggc cgtcagcgtg ttcgcgacct ggaccaaagc ctcgtcgccg
     6721 gccttgtggc cgaggctgtc gtttatctgc ttcaatccgt cgatgtcgac gaacagcatc
     6781 gccgcgcttt cgccgtagcg gctcacccgg ccgatcagcg catcgagctg gcgaagaaag
     6841 ccgcggcggt tggggaccgg caccagcggg tcctggtggg cgagctcgtc cagatgccga
     6901 acgcgctcct caagctgcgc gatcttctcc ttcaagcgcg cgatttcggc ttgcgcgtcc
     6961 atgtccagcg actcggcatc cccctgcatc acggcgccgg gataccagaa tcgccgccgc
     7021 gtgaaatctg cacgaatcgg ctgtcctgat tgcgaacagg cgaatcgctt cctaaaccgc
     7081 cgcttcggcg aagcagatgg gaattgacga gtggcggggc cccaggttgg aatcatcatg
     7141 ggcagcaagt ccgactggga gacgatgcgc catgccgccg agatgctcga cagcctcgga
     7201 attgcccacg aaaccaaggt cgtgtccgct caccgcacgc ccaagcggct ttacgactat
     7261 gcgcatggcg cgcgcgagcg ggggctcaag gtgatcatcg ccggcgccgg cggtgccgcc
     7321 catttgcccg ggatggccgc ctccatgacg accctcccgg tgctcggagt cccggtggag
     7381 acccagtcgc tcaagggcat ggatagcctg ttgtccatcg tccagatgcc cgcgggggtg
     7441 ccggtcggaa cgctcgccat cggcagggcg ggcgcggtca acgccgcgct cctcgccgcc
     7501 tcgatcctcg cggttgccga ccccaagctg gccgggcggc tcgacgagca ccgcgcaagc
     7561 cagacagcct cggtcgccga aacgccggaa tgaccatcgc tccgggcggc accatcggaa
     7621 tcatcggcgg cggccagctc ggcaagatgc ttgccgtcgc cgccgcccag ctcggctaca
     7681 cctgtcatat cttcgagccc ggcgagtcgc cctgcgccgc cgacgttgcc gcgcgcttca
     7741 cccgcgccga ctatgacgat gtcgaggcgc ttcgccgctt cgccgacggc gtcgacgtcg
     7801 ccacttacga gttcgagaat gtccccgcca agtcgctcga cgtcatcgct tcgaagcttc
     7861 gcccgggagt cgcttcgctg caggtcggcc agcatcgcgg acgcgaaaag gaattcatcg
     7921 agggcaccgg cgcccgggtc ggcccctgga tgcgggtcga tagcgaagcc gacgcgcttg
     7981 aggcggagcg caggcttggg gccccgctgg tgctcaagac tcgccgcctc ggctacgacg
     8041 gcaagggcca ggcgtgggcc cagcaggccg gctcggtcgt cgaagcctgg gacgccatcg
     8101 gccgcgagcc ggcggtcgcc gaagcgcgga tcgacttcga ctgcgaattc tcggtcgtgt
     8161 tggcgagggg cgccgacggc gcgatcgcta cctgggacct cccgctcaac gaccacgaga
     8221 acgggatact ccgccgctcg accgtccccg ccggagacgc cgtcgagcgc caccacggcg
     8281 aagcagtcgc ggttgcgacg aagatcgccg aaaccctggg ccacatcgga gtcctcaccg
     8341 tcgaattctt cgccactgca gacggtccga tcgtcaacga gatcgcaccc cgcgtgcaca
     8401 acagcggcca ctggacgatc gagggggcgg tcacctcgca gttcgagcag cacattcgcg
     8461 ccatctgcgg cctcccgctc ggctcgaccg ctcgggtcgg ctcgtcggcg gtgatggaaa
     8521 acctgctcgg cgacgagatc gaaggctggc cgcgcctggt cgccgagccc gaagcccacg
     8581 ttcacctcta ccgcaagggc aatcaccgtc ccggccgcaa gatgggccat gtgacgcgca
     8641 ttagctgatt gacagcgcta caattgtagc gctacaggtg tagcgtcacc ttcgaaaggc
     8701 cagctcatgc gacatctcgc cgtcctcctg cccctgacgt tcctcgccgc cgcccccctc
     8761 gcggccgccg agccggttgc cgtcccgtcc ttccgttcga tcgagcttcg cggcggcggc
     8821 aatgtcatcg tccgccccgg cccggcccgg gtcacgatcc tcgaagggag cagccggttc
     8881 acccgctttg cggtcgaccg ccagggccag ctcaagatcg acgcctgcaa cgcgcaatgc
     8941 ccgcgcaact acgacctgac gattgagatc cgctacccga ccgtgcttcc gatgggcgtc
     9001 aagggtggcg gcaccatcac cgccgaatcg ggcttcggcc cccagcagtc ggtggccgcg
     9061 ggagttggcg gcggcgggtt gatcgacctg cgctcggtca ctgctcgcac gg
//
LOCUS       DATAKH010000029         4197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_4089,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000029 DATAKH010000000
VERSION     DATAKH010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4197
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4089"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /gene="pyrB"
                     /locus_tag="VHN55_00935"
     CDS             complement(<1..235)
                     /gene="pyrB"
                     /locus_tag="VHN55_00935"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017671374.1"
                     /note="catalyzes the transfer of the carbamoyl moiety from
                     carbamoyl phosphate to L- aspartate in pyrimidine
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEX2802537.1"
                     /translation="MDLLSIDSLTDAQIAAILDRADEFRPGSTSDSLKGRIVFNLFYE
                     NSTRTLMSFASAAHRLAANVVTLPVEQSSVKKGE"
     gene            complement(247..729)
                     /gene="ruvX"
                     /locus_tag="VHN55_00940"
     CDS             complement(247..729)
                     /gene="ruvX"
                     /locus_tag="VHN55_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014076381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEX2802538.1"
                     /translation="MAAVITGDTGQFLASLPDAGKLAGLDVGTKTIGLAICDSGWHFA
                     GPAETLRRTKFTADMEKLREFIAREHVVGLVVGLPLSMDGSDSPRTQSVRAFARNLEP
                     LAIPILLWDERWSTQAVERAMIAADVSRARRAEKVDSLAAAHILQGAIDALANLAGPE
                     "
     gene            complement(714..1817)
                     /locus_tag="VHN55_00945"
     CDS             complement(714..1817)
                     /locus_tag="VHN55_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010186873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3089 domain-containing protein"
                     /protein_id="HEX2802539.1"
                     /translation="MCARRFLLAVTILTLLAVAAAFALFQFGGRVLRQQYTPQGHFQP
                     PPEGGAPAYRDAGLWIARPDIPNNPAQWLPAGMTRSEPGSAAVFYIHPTTYLKGDRWN
                     APMNDPASAWRDELFVQSQASTFSTAGEVWAPRYRQAAYGSFLLNSSDAQQALLVAYR
                     DVSDAFDEFLRQAGADRPIILAGHSQGALHLIRLLQERKADFKDRLVAAYVVGWPISA
                     AADLPALGYPACAAPGQASCILSWMSFGDPANPDLILDTWKTTSGPTGEKRRRRDIVC
                     VNPLSGTRSGSAPPSANPGTLVPNGDFSSANLVAGRVGAHCDDGLLIVDGEIPPLGPY
                     VLPGNNYHVYDYALFWGAIRRDAERRLAAWQRL"
     gene            1988..2473
                     /gene="msrB"
                     /locus_tag="VHN55_00950"
     CDS             1988..2473
                     /gene="msrB"
                     /locus_tag="VHN55_00950"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010414496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX2802540.1"
                     /translation="MTDTRETTFDLTPPTEDQLQQLKAGLSDEERRVLLEHGTEAPFC
                     GVFLEEKRPGVYTCRLCGLPLFHGGQKFESGTGWPSFTTPFAADHLDTVRDMSYGMVR
                     TEIVCARCGSHQGHVFPDGPPPTGERYCINSVSLEFTPEDEPLPDKLGRGAPEGEVWS
                     G"
     gene            2519..2806
                     /gene="gatC"
                     /locus_tag="VHN55_00955"
     CDS             2519..2806
                     /gene="gatC"
                     /locus_tag="VHN55_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007686469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEX2802541.1"
                     /translation="MSVSPEQVRHIAKLARIAMSDEEVERLVPELNNILGWVEQLGEV
                     NTDRVEPLTAVIEQKLRLREDAVTDGDCRDEVLANAPAAEHGFFAVPKVIE"
     gene            2803..>4197
                     /gene="gatA"
                     /locus_tag="VHN55_00960"
     CDS             2803..>4197
                     /gene="gatA"
                     /locus_tag="VHN55_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010403224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEX2802542.1"
                     /translation="MSELTSLTIAELRDGIRSREFKARDVAEAYNAAVAAARGLNAYT
                     VETPEDALAAAEAADSGKATGPLAGIPLGIKDLFATEGVDTTAGSKILKDFKPPYEST
                     VVANLRKAGAGMLGKLNMDEFAMGSSNETSAYGPVINPWRRKDGGNAALTPGGSSGGS
                     AAAVAAGIAAGVTGTDTGGSIRQPAAFTGICGIKPTYGRCSRWGIVSFASSLDQAGPM
                     AKTVRDCAILLGAMAGFDPKDSTSLNEPVPDWEGGLSSDLNGKRVGIPKEYRIDGVPE
                     EINGLWDKGIEWLKDAGAEPVEISLPHTKYALPTYYIIAPAEASSNLARYDGVRYGLR
                     VEGAKTLDDMYAATRAAGFGAEVKRRIMIGTYVLSAGFYDAYFTKAQKVRALIKQDFA
                     RAFEQCDVILTPTAPSAAFGLGEKSDDPIAMYLNDVFAVPASLAGLPAMSVPGGLDGQ
                     GLPLGLHLIGPELDE"
BASE COUNT          733 a         1292 c         1482 g          690 t
ORIGIN      
        1 tctcgccttt cttcaccgac gattgctcga ccggaagcgt gacgacgttg gcggcgagcc
       61 ggtgggcggc gcttgcgaag gacatcaacg tgcgggtcga gttctcgtag aacaggttga
      121 acacgatccg gcccttcagg ctgtcgctgg tgctgccggg acgaaattcg tccgcgcgat
      181 cgaggatcgc tgcgatctgc gcgtcggtca gggagtcgat cgatagaagg tccacttgct
      241 gaccgcttat tcgggaccgg caagatttgc cagtgcgtcg atcgccccct ggaggatgtg
      301 ggctgccgcg agcgagtcga ctttctcagc gcggcgggcg cggctgacgt cggccgcgat
      361 catcgcccgt tccaccgcct gggtcgacca gcgctcatcc cataacaaga ttggtatagc
      421 gagcggctcg aggttgcggg cgaaagcgcg caccgactgc gtgcgggggc tgtcgcttcc
      481 gtccatgctg agcggaagcc cgacgacaag gccgacgaca tgttctcggg cgatgaactc
      541 gcgcagtttc tccatgtcgg cggtgaactt tgtccgccgc agcgtctcgg cggggccggc
      601 gaagtgccac ccggaatcgc agatcgcgag gccgatcgtc ttggttccga cgtcgaggcc
      661 cgcaagcttg ccggcatccg gcaggctcgc caggaactgg cccgtatcgc cggttataac
      721 cgctgccatg ccgccagcct ccgttccgcg tcgcggcgga tcgcgcccca gaagagggcg
      781 tagtcgtaga cgtgataatt gttgcccgga agcacgtagg ggccgagtgg cgggatttcg
      841 ccgtcgacga tcaggaggcc gtcgtcgcag tgggcgccga cccggccggc gaccaggttc
      901 gcgctcgaaa aatcgccatt ggggacgagc gttcctggat tcgccgaggg cggcgccgat
      961 cccgacctgg ttccgctaag cgggttcacg cagacgatgt cgcggcggcg gcgcttctcg
     1021 cccgtcgggc cgctggtcgt cttccatgta tcgaggatga ggtcgggatt ggctgggtcg
     1081 ccgaagctca tccagctgag gatgcacgaa gcctggccgg gcgccgcgca ggctgggtag
     1141 ccgagggctg gaaggtcggc ggccgcgctg atcggccaac cgacgacata agcggctacg
     1201 agccggtcct tgaagtccgc cttccgctcc tgcagcaacc ggatcaggtg gagcgcgccc
     1261 tggctgtggc cggcgaggat gatcgggcga tctgcccccg cctgcctgag gaactcgtcg
     1321 aaggcgtcgg agacgtcgcg ataggcgacg agcagcgctt gttgcgcatc gctgctgttc
     1381 aaaaggaacg agccataggc ggcctggcga taccttggcg cccacacttc gccggccgtg
     1441 ctgaatgtgc tcgcctggct ctggacgaac agctcatcgc gccaggcgct cgccgggtcg
     1501 ttcataggcg cgttccagcg gtcgcctttc aggtaggtag tcgggtggat gtagaagacc
     1561 gccgccgagc cgggttccga acgagtcatg cccgctggaa gccattgtgc aggattgttc
     1621 gggatgtcgg ggcgcgcgat ccaaagaccg gcgtcgcgat aggccggcgc accgccttcg
     1681 ggcggaggct ggaaatgacc ctgcggcgta tattgctggc gaaggaccct cccgccgaac
     1741 tggaataagg cgaacgccgc ggcgactgcc agcagcgtca ggatcgtcac ggcaaggagg
     1801 aagcggcgag cgcacatcgg tggggcggtt aggcgagggg ggccgaccgg gcaaccgagc
     1861 gacaacaact ttccgagcag atcgagggcg gcgaccggag aaatgagcct ttcgcattcg
     1921 acggggtgcc gacaggagtg acggacgacg gccggtgcgg taatcggcgg cgtgaaaggc
     1981 gcaagcaatg accgacaccc gcgaaacgac gttcgacctc accccaccga ccgaggacca
     2041 gctccagcag ctcaaagccg ggctcagcga cgaggagcgg cgcgtgctcc tcgagcacgg
     2101 gaccgaggcg ccgttctgcg gcgtgttcct cgaggagaaa cggcccggcg tttacacgtg
     2161 ccggctgtgc gggctgccgc tgttccacgg gggacagaag ttcgagagcg ggaccggctg
     2221 gccgagcttc actacgccct tcgccgccga ccatctcgat acggtccgcg acatgagtta
     2281 cggcatggtt cggaccgaga tcgtatgcgc ccgctgcggg tctcaccagg ggcacgtctt
     2341 tcccgacggg ccgccgccga ccggcgagcg atactgcatc aactcggtga gcctcgagtt
     2401 cacgcccgaa gacgagccgc ttcccgacaa gctcggccgc ggcgctcccg aaggcgaggt
     2461 ttggagcggc tagggccgct tgccgcccgt tagcggcccc gctatccgcg cccccgcaat
     2521 gagtgtttcc cccgaacagg tccgccatat cgccaagctc gcccgaatcg cgatgagcga
     2581 cgaggaagtc gagcggctcg tgcccgaatt gaacaacatc ctcggctggg tcgagcagct
     2641 cggcgaggtg aataccgacc gagtcgagcc gctgaccgcc gttatcgagc agaagctgcg
     2701 gcttcgcgag gatgctgtga ccgacggcga ctgccgcgac gaggtgctgg cgaacgcgcc
     2761 agccgccgag cacgggtttt tcgccgtgcc caaggtgatc gagtgagcga gcttacgtcc
     2821 ttaaccattg ccgagcttcg cgacggtatc cgttcgcgcg agttcaaggc gcgcgatgtc
     2881 gcggaggcct ataatgcggc ggtcgctgcg gctcgcgggc tgaacgctta tacggtggaa
     2941 acaccggagg atgccctcgc tgccgccgaa gcggccgatt cgggcaaggc gacggggccg
     3001 ctggcaggca ttccgttggg gatcaaggat ttgttcgcga ccgagggcgt cgatacgacg
     3061 gcggggagca agatcctcaa ggacttcaag ccgccttacg agagcaccgt ggtggccaac
     3121 ctgcgcaagg cgggcgcggg gatgctgggc aagctcaaca tggacgagtt cgcaatgggc
     3181 tcgtcgaacg agaccagcgc ctacgggccg gtgatcaatc catggcggcg caaggacggg
     3241 ggcaatgcgg cgctgacccc tggcggttcg tcgggtgggt ccgctgcggc ggtcgccgca
     3301 gggattgcgg cgggcgtgac cgggacggac accggcggat cgatccggca gccggccgcc
     3361 tttaccggta tttgcggcat caagccgacc tacgggcggt gctcgcgctg gggaatcgtg
     3421 tcgttcgcaa gctcgctcga ccaggcgggg ccgatggcga agacggtccg cgactgcgcg
     3481 atcctgctcg gcgcgatggc ggggttcgat cccaaggatt cgacatcgct gaatgagcct
     3541 gtgcccgact gggaaggcgg attatcgagc gatctcaacg gcaaaagagt cgggattccg
     3601 aaggaatatc ggatcgatgg cgtcccggaa gaaatcaacg gcctctggga caagggcatc
     3661 gagtggctga aggacgcggg cgcggagccg gtcgagatca gccttccgca caccaaatat
     3721 gcgcttccga cctactacat catcgctccg gccgaagcat cgtcgaacct cgctcgctat
     3781 gacggggttc gctatgggct ccgcgtcgag ggcgcgaaga cgctcgatga catgtatgcg
     3841 gcgacgaggg cggcgggctt cggtgccgag gtgaagcggc ggatcatgat cggcacctat
     3901 gtgctgtcgg cgggcttcta cgacgcttat ttcaccaagg cacagaaggt gcgggcgctg
     3961 atcaagcagg atttcgcccg ggcgttcgag cagtgtgacg tcattttgac gccaaccgct
     4021 ccatccgcag cgttcgggct cggcgagaag agcgacgacc cgatcgcgat gtacttgaac
     4081 gacgtattcg cggtgcctgc cagtctcgcc ggccttcccg cgatgagcgt gccaggcggc
     4141 ctggacgggc aggggcttcc gctcgggctc cacctcatcg ggccggagct ggacgag
//
LOCUS       DATAKH010000030        11805 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_678,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000030 DATAKH010000000
VERSION     DATAKH010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11805
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_678"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="VHN55_00965"
     CDS             complement(<1..414)
                     /locus_tag="VHN55_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthetase"
                     /protein_id="HEX2802543.1"
                     /translation="MARFIFVTGGVVSSLGKGLLSASLGALLQARGFKVRIRKFDPYL
                     NVDPGTMSPYQHVEVFVTDDGAETDLDLGHYERFTGVSARQSDNITTGRIYRDIIARE
                     RRGDYLGATVQVIPHVTNAIKEFALSEIDDLDFVIC"
     gene            complement(485..862)
                     /gene="secG"
                     /locus_tag="VHN55_00970"
     CDS             complement(485..862)
                     /gene="secG"
                     /locus_tag="VHN55_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEX2802544.1"
                     /translation="MFTFLLIVQTIVAAALVGTILMQRSEGGGLGVGGSSSGFMTARG
                     AADFLTRSTAVLATIFIALAIALAAIAGVNRKPATIDTSLANSLAPAAPVAAPAAPSE
                     AQPAEGQQQAPANHAEPAVPLAQ"
     gene            complement(908..1657)
                     /gene="tpiA"
                     /locus_tag="VHN55_00975"
     CDS             complement(908..1657)
                     /gene="tpiA"
                     /locus_tag="VHN55_00975"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019371028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX2802545.1"
                     /translation="MTRRNLVVGNWKMHGVAADIGEIQAIAEAAARNPQADVGICVPA
                     TLIDRAVRAVPGFAIGAQDVHSAPKGAHTGCISAEMLDDAGATIAIVGHSERREAQCE
                     SDEDVRAKAEAGLRASLLTILCVGESLEVRESGGALATVLQQLDQSLPRNVDLAKLSI
                     AYEPIWAIGTGRTATTGDIAEMHAAIRQRLNAIYGDSGERIRILYGGSVKAANAAEIF
                     AAEDVDGGLVGGASLTAADFIPIIEAAALKA"
     gene            1768..3705
                     /locus_tag="VHN55_00980"
     CDS             1768..3705
                     /locus_tag="VHN55_00980"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEX2802546.1"
                     /translation="MLKSFRRASKSTIGTAVIAFIGILILIGFAGADMQSVGLGGSGL
                     SADTLAKVGSLEVTDRDMDSAMQQRLAQVRQENPEADYSALAGDFEPLLQDMIAQRAL
                     QEFARKHGLVLSKRLIDAEIANIPGVKGLAGEVSTEAYQAFLARQRLTDQEVRELISG
                     NLLERLLVIPGVTDARVPVGVATPYASMLLEERQGQVAIIPAAPFTAGLNPTDSQLQQ
                     YYNANRARYMVPEQRVLKIARIGPEQVANITASPQEVEAYYKANQQVYGAKDIRTISQ
                     ALVPDQKVAAAIAQRARSGQSLVDAAKPAGLGAADVQLGPQTRQQFGEVVGSKVMAAA
                     FGAKAGEIVGPIQSDLGWHVIKIEAAETRPGKSLAEARDEIANRITTEKRENALADIV
                     NGIQDSIDDKGSSFDEAAKAAGLTVTTTPRITAGGTSLGNSGYAFPTELEPALKSGFE
                     LAPTDEPVVDQLAEGKGFALVSPAEVIPAAPPPLASIRDRVRDDWIQGRALQKAKQVA
                     DAIAAKAAGKGSLADALKQAGVPLPPPQPMRARRIQLSQMGEKVPAPLRALFSSTQGK
                     TPVGPDPDGRGYFVVKVDKVIPGNALNQPALIAQVQNEFAEPMAQEYARQFLSAVKQS
                     MGVQRNEAAISAAKKRIVGGS"
     gene            3783..4430
                     /gene="lexA"
                     /locus_tag="VHN55_00985"
     CDS             3783..4430
                     /gene="lexA"
                     /locus_tag="VHN55_00985"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEX2802547.1"
                     /translation="MLTSKQRELLLFIHQRLGETGVSPSFDEMREALSLKSKSGVHRL
                     ISALEERGFIRRLPNRARALEVVKLPEGSATAAVPQRPVIPAAANDTIEIPLHGRIAA
                     GTPIEALQGTEGFAVPAALLGPGEHYALEVSGDSMIEEGILDGDFALVRKVDSARDGE
                     IVVALVDEEEATLKTYRREGAMIRLDPANSRYEPQRYDESRVRIQGRLTGLIRRY"
     gene            4435..4782
                     /locus_tag="VHN55_00990"
     CDS             4435..4782
                     /locus_tag="VHN55_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2802548.1"
                     /translation="MKSPRLDYLELPSGELESSIAFYQKAFGWSLTRFGPSYAATTTG
                     DTDIGLQGDQGAWSEAPLPVIQVEDVVAAAAAVEAAGGDIIRPVYSFPGGRRFHFRDP
                     SGNELAAWQAAGE"
     gene            complement(4787..5059)
                     /locus_tag="VHN55_00995"
     CDS             complement(4787..5059)
                     /locus_tag="VHN55_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEX2802549.1"
                     /translation="MPQYVIERDMPGVGGLGAADLKGASQTSCNVLRELGPEIQWVHS
                     YVTDNKIYCIYRAPNEDIIREHAQKGGFPANKISEVKTIIDPTTAE"
     gene            complement(5097..7235)
                     /locus_tag="VHN55_01000"
     CDS             complement(5097..7235)
                     /locus_tag="VHN55_01000"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEX2802550.1"
                     /translation="MQWTSAPNIAGAPLPQRARGYWRAQFSAVRERLEAFLEAERAQL
                     PPWAVVGFGTGIAAWFALDTPREWLALLALGSGLAIAGFTIRGGRAERAAGWFALAMT
                     LGCALVWARSATVAAPRVERPGVEAFEAVVERTEPLVAKGTVRLTLATATPGVPPRVR
                     VSIPADKAQPSLASGARVRVRAWLMPPPSMALPGTYDFARDAWFRGIGAVGRALGSVE
                     IIEPGGGSGLDGVRQRLGEHVRERLPGASGGIATALATGDQNAVAEDDAEAMRRSGLT
                     HLLSVSGLHIAAVVGAAMLLTLKLLALSERVALRLNLVLVAAGAGAVAGIGYTLLTGA
                     QVPTVRSCIVALLVLAGIALGRDALSMRLLSVAALAILLVKPESLAGASFQLSFAAVT
                     AIIALHSTGWARRTFMRRDEGPVARIGRAILAMLATGLAVELALIPFALYHFHKAGLY
                     GIAANLVAIPLTTFVIMPLEAGALLLDLAGLGAPLWYFAGLSIDALLWLARTVGNASG
                     AVATLASMPGWSFATIIAGGLWLSLWTGRARLAGLVPFAIGAAGAAAAPTPDLLVTGD
                     GKHLAVVATDGRPRILRNRTGDFMRDVFAESSGFDGDPEELEDSRFAACSHDACVANV
                     VRAGRSWRVLATRSSAWLEWNDLVAGCARADIAVSDRWLPRGCAPKWLKLDRKSLSRT
                     GGVAIYLSDEPRVVTVAEQIGNHPWATMSK"
     gene            7265..8680
                     /gene="gltX"
                     /locus_tag="VHN55_01005"
     CDS             7265..8680
                     /gene="gltX"
                     /locus_tag="VHN55_01005"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX2802551.1"
                     /translation="MSASDHSPVVTRFAPSPTGFLHIGGARTALFNWLFARHHGGKFL
                     LRIEDTDKVRSTKEAIDAILDGMRWLGLDWDGHEYYQSQFWSRHAEVAHKLLERGHAY
                     RCFMTTEELAAEREKAQAERRPFRIRSPWRDRGDAPEGEPFVIRLKAPQEGETVIQDQ
                     VQGRVAVQNAEIDDFVLLRSDGTPTYMLAVVVDDHDMGITHVIRGDDHLNNAFRQLAI
                     IRAMGWPEPVYAHVPLIHGPDGAKLSKRHGALGVDSYRDELGMLPEAVFNYLLRLGWG
                     HGDDEIISREQATEWFGLDHVGKSPSRFDFKKLENLNGHYIREADDSRLAQLVAPRIA
                     TALTADQRDLLVKAMPELKARAHTLNELADGTRFLFDKRPLAMDPAAEALLTPEARSL
                     LNAAHGALAGVGSWEHDEIEQSIRQVADEQGVKLGKLAQPLRAALTGRTTSPGIFDVL
                     ALLGQGESLKRIEDQLLERHE"
     gene            8677..9960
                     /locus_tag="VHN55_01010"
     CDS             8677..9960
                     /locus_tag="VHN55_01010"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEX2802552.1"
                     /translation="MTDAVTFKLPKGDFDYKVLDGSVGPEVVDIRKFYGETGMFTYDP
                     GFTSTASCQSAITYIDGEKGILLHRGYPIDQLAEQSTFMEVAYLLLHGELPNREELDT
                     FTYTISRHTMLHEQLMIFFRGFRRDAHPMAIMCGVVGALSAFYHDSTDITDPQQRMIA
                     SHRLIAKMPTIAAMAFKYSIGQPFLYPDNSLSYTANFLRMTFGVPAEQYEINPVIENA
                     MRRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLR
                     EIGDPKNIPSYIARAKDKNDPFRLMGFGHRVYKNYDPRAKVMQATAEEVLKELNISDP
                     VLDVAQELEQIALHDDYFIEKKLYPNVDFYSGVILNAIGFPTDMFTALFALARTVGWV
                     AQWNEMISDPEQKIGRPRQLYVGETKREYVPVEKR"
     gene            complement(9969..11291)
                     /locus_tag="VHN55_01015"
     CDS             complement(9969..11291)
                     /locus_tag="VHN55_01015"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX2802553.1"
                     /translation="MASAPSDPRPILGRVDASGRLVAADPELERLQVEAGSSLGSSLA
                     LPQLAAIVRIAKRLGIPLSRRVLAAGRGQDVDMWVRAVPEDEDVVLTIERWTARPASQ
                     PRLAAMSAVEHESLVAKPLGWSVDDHLRLLEIAPPLAELLSCDAADAAGEPLTKYFRL
                     EEGEDGEMPLLDALVSRGGFEGQRVSARDSGRQFLLNGSVVLAADGAFAGFEGTAVVD
                     GDSGAESGRPALDGAIQTALRSPLDRIVQSAEEMRSAADSSVGERYTAYAADIATAAR
                     HLLSVVRSLGENGESAADGQVDLAELASEAVALVDSQAQERSIIIGVQPIECLFARGQ
                     ARSVVQILVNLIGNAVRYSPPQTTVTVSFAQSQESAMVHVADEGAGIDACDHERIFEA
                     FQKGSEEGEGSGLGLAIARRLARAMGGDIQLRSAPGEGSRFTLVLPVA"
     gene            complement(11272..>11805)
                     /locus_tag="VHN55_01020"
     CDS             complement(11272..>11805)
                     /locus_tag="VHN55_01020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802554.1"
                     /translation="VVLVNAIAAALRTDLVKRLDPADADERLGTASLSVLAGHDEGNR
                     LEARLFDLVHALGEAERLDESLIRSALDEGEASLLAEVLGRTAGISFQPAWEHLTGAG
                     GLALLLRMSGASRTLAGEVIARLAEVVAADPESEISAFDSLSEQDVDSARKWLRLDPA
                     YRSAIETLASGHGQRTL"
BASE COUNT         2198 a         3894 c         3845 g         1868 t
ORIGIN      
        1 gcaaatgacg aagtcgaggt catcgatctc cgagagggcg aattccttga tcgcgttggt
       61 gacgtgcgga atgacctgga cggtggcacc gagataatcg ccgcggcgct cgcgggcgat
      121 gatgtcgcgg tagatgcgac cggtggtgat attgtccgac tggcgcgcgg acacccccgt
      181 gaagcgctcg taatggccaa ggtcgagatc ggtctcggcg ccgtcgtcgg tgacgaagac
      241 ctcgacgtgc tggtagggtg acatcgtccc ggggtcgacg ttgagatagg ggtcgaactt
      301 gcggattcgg accttgaatc cgcgcgcctg gaggagcgct ccgagcgagg cggagagcag
      361 gccttttcca agtgaagaca ccacgccgcc ggtgacgaaa atgaaccgcg ccatggggct
      421 tgcggcttag agatggattg cccgattggg caagccgtca gtgaaaataa atgtggctaa
      481 gtcgtcactg ggccagggga accgcgggct cggcatggtt ggctggcgcc tgctgctggc
      541 cctcggcggg ctgcgcttcg ctcggagccg ccggtgcggc cacgggcgcc gccggcgcaa
      601 gagagttggc cagcgaagtg tcgatcgtcg ccggcttgcg gttgaccccg gcaattgccg
      661 caagcgcgat cgccagggcg atgaagatgg tcgcaagcac cgccgtcgag cgggtcagga
      721 agtcggccgc accgcgagcc gtcatgaatc ccgacgagct tcccccaact ccaaggcctc
      781 cgccctccga gcgttgcatc aggattgtgc cgaccaacgc agcggcaacg atagtctgaa
      841 cgatcaacag gaaggtgaac atcgggggag cccttgaatg gtgtcgcggc gacttagcga
      901 cccgcgctca tgctttcaac gccgccgcct cgatgatcgg gatgaagtcg gccgcggtta
      961 ggcttgcgcc gccgacgagg ccgccgtcga cgtcttcggc ggcgaagatt tcggcggcgt
     1021 tggccgcctt caccgagccg ccgtagagaa tccggatcct ctctccggaa tcgccgtaaa
     1081 tggcgttgag ccgctggcgg attgcggcat gcatttcggc gatatctccg gtggtcgctg
     1141 tacggccggt gccaatggcc cagatcggct cgtaagcgat ggagagcttc gcaaggtcca
     1201 cgttgcgagg aagcgactgg tcgagctgct ggagcacggt ggcgagcgcg ccgcccgatt
     1261 ctcggacctc cagtgattcg ccgacgcaga ggatggtcag gagactcgcc cgaagccctg
     1321 cttccgcctt ggcgcggacg tcctcgtcgc tctcgcactg ggcttcgcgg cgctccgaat
     1381 ggccgacgat ggcgatggtc gctccggcat catcgagcat ttcggcggag atacagccgg
     1441 tatgcgcccc tttcggcgcg gaatgcacgt cctgcgcgcc gatcgcgaaa cccggcaccg
     1501 cgcgcaccgc gcggtcgatc agcgtcgccg ggacgcagat accgacatcg gcctgcgggt
     1561 tgcgggccgc tgcctccgcg attgcctgaa tctcgccgat gtcagcggcg acgccgtgca
     1621 tcttccaatt gccaaccacc aagttgcgcc gagtcatcat ttgcccctgc cgttgccgaa
     1681 acgcgcctag ccgcgccgcg cttgaaggcg caagcgcccg cccctaaagc ttcgcctgaa
     1741 ttttccttcc cgagagtttc gcccgcaatg ctcaaatcct tccgccgcgc ttccaaatcc
     1801 accatcggca ccgccgttat cgccttcatc ggaatcctga tcctgatcgg atttgccgga
     1861 gccgacatgc aaagcgtcgg ccttggcgga agcggcttga gcgccgacac gctggcaaag
     1921 gtcggatcgc ttgaagtcac cgaccgagat atggactcgg cgatgcagca gcggctggcg
     1981 caagtccgcc aggagaatcc cgaagccgac tattcggcgc tcgcaggcga tttcgagccg
     2041 ctcctccagg acatgattgc gcagcgcgcg cttcaggagt tcgcgcgcaa gcacgggctg
     2101 gttctgtcaa agcgcctgat cgatgcggaa atcgccaaca tccccggggt gaaagggctg
     2161 gccggagagg tcagcaccga agcctatcag gctttcctgg cccgtcagcg gctgaccgac
     2221 caggaggtcc gcgaactcat ttccgggaac ctgctggagc ggctactggt cattcccggc
     2281 gtgacggatg cccgggtccc ggtcggggtc gcgacccctt atgcgtcgat gctcctcgaa
     2341 gagcggcagg gacaagtggc gataatcccg gccgccccct tcactgccgg cctgaaccca
     2401 acggactctc aactgcagca atattacaat gccaaccggg cccgctacat ggtcccggag
     2461 cagcgagtgc tgaaaatcgc ccggatcggg ccggagcaag tggcgaacat caccgccagc
     2521 ccgcaggaag tggaagccta ttacaaggct aaccagcagg tttacggggc caaggatatc
     2581 cggacgatca gccaggcgct cgttcccgac cagaaggtcg ccgcggcaat cgcccagcgc
     2641 gcccgcagcg ggcaaagcct ggtggatgcg gcaaagccgg ccggcctcgg agcggcggat
     2701 gtgcagctcg gcccgcagac ccgccagcag tttggcgagg tcgtcggcag caaggtcatg
     2761 gcggcggcgt tcggcgcgaa agcgggcgaa atcgtcggtc caatccagtc ggacctcggc
     2821 tggcacgtga tcaagatcga ggccgcagag acccgtccgg gcaagtcgct cgccgaggca
     2881 cgggacgaaa tagccaatcg gatcaccacc gagaagcgcg agaatgcgct tgccgacatc
     2941 gtcaacggca tccaggattc gatcgacgac aagggaagca gtttcgacga ggccgccaag
     3001 gcggcgggcc tgaccgtgac cacaaccccg cggatcaccg ccggcggaac cagcctaggc
     3061 aattccggct acgccttccc caccgaactt gagccagcgc tcaagtccgg cttcgagctg
     3121 gcgccgaccg acgagccggt cgtcgaccag ctggccgagg gcaagggctt cgctttggtg
     3181 tcgccggccg aggtcatccc tgccgccccg cccccgcttg ccagcatccg cgaccgcgtg
     3241 agagacgatt ggatccaggg acgggcgttg cagaaggcga agcaggttgc cgatgccatt
     3301 gccgccaagg cggccgggaa gggttcgctt gctgacgcgc tcaagcaggc gggcgtaccg
     3361 cttccgccgc cgcagccgat gcgagcccgg cgaatccagc tttcgcagat gggcgaaaaa
     3421 gtgccggcgc cgttgcgggc gctgttctca agcacccaag ggaagactcc ggtcggtccc
     3481 gatccggacg gacgcggcta tttcgtggtc aaggtggaca aggtgatccc aggcaacgct
     3541 ctcaaccagc ccgcccttat cgcccaggtg cagaacgagt tcgcagagcc catggctcag
     3601 gaatatgcgc ggcagttcct gtcagcggtc aagcagagca tgggcgtcca gcgcaacgag
     3661 gcggcgatct ccgctgcgaa gaagcggatc gtcggcggga gctgacaagc ccgcagggct
     3721 tgacccgcca agctttgttg cctagacgtt ccctattcgt tccagcgatg ggggccgacg
     3781 acatgctgac atccaaacag cgcgagcttc tcctcttcat tcaccagcgc cttggggaga
     3841 ccggggtcag ccccagcttc gacgagatgc gcgaggcgct ttcgctcaaa tccaagtcgg
     3901 gggtgcaccg actcatctcc gcgctcgaag agcgaggatt cattcgccgg ctgcccaatc
     3961 gcgcccgggc tctcgaagtc gtcaagctgc ccgaaggcag cgccactgcg gcagtcccgc
     4021 agcgcccggt gatcccggcg gcggcaaatg atacgatcga aatcccgctt cacgggcgga
     4081 tcgccgcggg aacgccgatc gaggcgcttc aaggcaccga gggcttcgcg gtcccggcgg
     4141 cactgctcgg gccgggcgaa cattatgcgc tcgaagtgtc gggtgactcg atgattgagg
     4201 aggggatcct cgatggcgac tttgccctcg tccggaaggt cgacagcgcc cgcgacggag
     4261 agatcgtcgt cgctcttgtc gacgaagagg aagcgacttt gaagacctat cggcgcgaag
     4321 gggcgatgat ccgcctcgat ccggcaaatt cccgctacga gccgcagcgc tacgacgaaa
     4381 gccgggttcg aatccagggc cgcctgacag ggctgatccg gaggtactga aacgatgaaa
     4441 agcccgcgcc tggactatct ggaacttccc tccggcgagt tggaatcctc gatcgctttc
     4501 taccagaagg cgttcggctg gagcctcacg cgattcgggc cgagctatgc ggcaacgacg
     4561 acaggcgaca cggacatcgg attgcagggc gaccagggcg cctggtcaga ggcgccgttg
     4621 ccggtcatcc aggtggaaga cgttgttgcc gccgccgccg ctgtcgaggc ggccggcggc
     4681 gacatcattc ggcccgtcta cagcttcccg ggcggccgcc gattccactt ccgcgacccc
     4741 agcggcaacg agcttgcggc ctggcaagcg gccggggagt gagcccctat tccgcagtgg
     4801 tcgggtcgat gatggtttta acctcggaaa tcttgttggc gggaaaaccg cccttttgcg
     4861 catgctcgcg gatgatgtcc tcgttcggcg ctcggtaaat gcagtagatc ttgttgtcgg
     4921 tgacgtagct gtggacccat tgaatttcgg gtccgagctc gcgaaggacg ttgcagctgg
     4981 tttgggacgc gccctttaga tccgctgctc ccaaaccgcc gacgcccggc atgtcccgtt
     5041 cgatcacata ttgcggcatt ctacttccct tctgtcacca aggcgcgttc gatacctcat
     5101 ttcgacatcg tcgcccacgg gtgattacca atctgctcgg ccaccgtcac gacgcgcggc
     5161 tcgtcgctga gataaattgc gacaccgccg gttcgcgaca gcgacttgcg gtcgagcttg
     5221 agccacttcg gagcgcagcc gcgggggagc caacggtccg aaaccgcgat gtcggcgcgc
     5281 gcgcagccgg ccaccaggtc attccactca agccaggcgg acgaacgggt cgcgagcacc
     5341 cgccacgaac gaccggccct cacgacattg gcgacgcatg cgtcgtgcga gcaggccgca
     5401 aaccgcgaat cctccagctc ttccggatcg ccgtcgaagc cggagctctc agcaaaaacg
     5461 tcgcgcatga aatcgccggt tcggttgcga aggatccgcg gcctgccgtc ggtcgcgacg
     5521 actgccagat gcttgccgtc gccggtgacg agcaggtcgg gagtcggagc ggcggcagct
     5581 cctgccgctc cgatcgcgaa aggcacgagc cccgcaagcc gcgcccgccc ggtccacagc
     5641 gacagccaca aacctccggc gataatcgtt gcgaaggacc agcccggcat cgatgcgaga
     5701 gttgcgactg cgccgctggc attgccgacg gtgcgcgcca accacaacag cgcgtcgatc
     5761 gaaagacctg cgaagtacca cagtggcgcg ccgagaccgg cgaggtcgag aagcagcgct
     5821 ccggcctcca gaggcatgat gacgaaggtg gtcagcggga tcgcaacgag gtttgcggcg
     5881 atcccgtaaa gcccggcctt gtggaaatgg tagagagcga acgggatcag ggccaattca
     5941 acggccagcc cggtggcaag catcgccagg atggcccggc cgatgcgcgc gaccggtccc
     6001 tcgtcgcggc gcatgaacgt gcgacgcgcc caaccggtcg agtgcagcgc gatgatcgcg
     6061 gtcaccgcgg cgaagctgag ctggaagctg gcgccggcga gcgactccgg cttgaccaga
     6121 aggatggcca gtgcggcgac gctcaagagg cgcatgctga gcgcgtcccg cccgagtgct
     6181 atgccggcga gcaccagaag agcgacgatg cagctcctga ccgtcggcac ctgcgcgccg
     6241 gtgagaagcg tgtagccgat cccggcgacc gctccggccc cggccgcgac cagcaccagg
     6301 ttgaggcgca gcgccacgcg ctccgaaagc gcaagcagct tgagagtcag aagcatcgcg
     6361 gcgccgacga ccgcggctat gtgcagcccg ctgacggaga gaagatgggt caggccgctc
     6421 ctgcgcatcg cctccgcgtc gtcttcggcg acggcattct ggtcgccggt ggcaagcgcc
     6481 gtagcgattc cgccagacgc gcccggaagg cgctcccgga catgctcgcc gaggcgctgc
     6541 cgcacaccgt cgaggccgct gcctccgccc ggctcgataa tctcgacgga cccaagggca
     6601 cgcccaaccg cgccgatccc gcggaaccag gcgtcgcggg cgaaatcgta ggtgccgggg
     6661 agcgccatcg atggcggcgg catcagccag gcgcggaccc gcaccctggc gccggaagca
     6721 aggctcggct gtgccttgtc ggccggaatc gaaaccctca cccgcggcgg cacgcccggg
     6781 gtcgcagtcg ccagggtcag gcgcacggtc cccttggcga ccagcggctc cgtacgctcg
     6841 acaaccgctt cgaaggcctc caccccgggc cgctccaccc gcggcgcggc tacggtcgcc
     6901 gagcgcgccc aaaccagggc gcagccgagc gtcatcgcca gcgcgaacca gcccgctgcc
     6961 cgctcggcgc ggccgccgcg aatcgtaaag ccggcgatgg caaggccgct cccgagcgcc
     7021 agcaacgcca gccattcacg cggcgtgtcg agcgcgaacc aggcggcgat accggtgccg
     7081 aagccgacaa cggcccacgg cggaagctgg gcgcgctcgg cctcgagaaa ggcttccagc
     7141 ctttcccgaa ccgcagaaaa ctgcgccctc caatagcccc gagcccgctg tggaagaggc
     7201 gcacccgcta tgttaggggc gctcgtccat tgcattgcac aactgagaca agaggaaaga
     7261 gcgcttgagc gcaagcgatc attcgccggt ggtgacacgc ttcgcgccgt cgccgacagg
     7321 attcctgcac atcggcggcg cccggacggc gctgttcaac tggctgttcg cccgccatca
     7381 cggcggcaag ttcctgcttc ggatcgaaga taccgacaag gtccgctcga ccaaggaggc
     7441 gatcgacgcg atcctcgacg ggatgcgctg gctcggcctc gattgggacg ggcacgaata
     7501 ttaccagtcg caattctggt cgcgtcacgc cgaggtcgcg cacaagctac tcgagcgcgg
     7561 ccacgcctat cgctgcttca tgaccaccga ggagctcgct gcggagcgcg aaaaggcgca
     7621 ggccgagcgt cggccattcc ggatccgcag tccctggcgc gaccgcggcg atgccccgga
     7681 gggcgagccg ttcgtcatcc gcctgaaggc gccacaggag ggcgaaaccg tcatccagga
     7741 ccaggtccag ggccgggtcg cggtgcaaaa tgccgagatc gacgatttcg tcctgctcag
     7801 gtcggacggc acccccacct acatgctggc agtggtcgtc gacgaccacg acatgggaat
     7861 tacccatgtg atccgcggag acgaccattt aaacaatgct ttccgacagt tggcaattat
     7921 ccgcgcgatg ggatggccgg agccggtcta cgcgcatgtg ccgctgatcc acggccccga
     7981 cggcgccaag ctcagcaagc ggcatggtgc gcttggagtc gattcctacc gcgacgagct
     8041 ggggatgctt cccgaagcag tgttcaacta tctgctccgg ctcggctggg ggcatggcga
     8101 cgacgagatc atcagccggg agcaggcgac cgaatggttt gggctcgacc atgtcggcaa
     8161 atcgccgtcg cggttcgatt tcaagaagct tgagaatctc aacggtcact acatccggga
     8221 agcggacgat tcgcggctcg cgcagctggt ggcgccgagg atcgcgacgg cgctgactgc
     8281 ggaccagcgg gacctgctgg tcaaggcgat gcccgagctg aaggcgcgcg cccacacact
     8341 caatgagctc gccgacggca cccgattcct gttcgacaag cgcccgctcg cgatggatcc
     8401 ggcggccgag gccctgctca cgcccgaagc ccgctcgctt ctgaacgcgg cgcatggagc
     8461 gctcgccggc gtcggcagct gggagcacga cgagatcgaa caatcgatcc gccaagtggc
     8521 cgacgagcag ggcgtgaagc tcggcaagct tgcgcagccg cttcgagccg cgctgaccgg
     8581 gcgaacgacg agcccgggaa tttttgacgt gctggccctg ctcgggcagg gcgagagcct
     8641 taagagaatt gaagaccagc ttttggagcg acacgaatga ccgacgccgt caccttcaaa
     8701 ctgccgaagg gcgatttcga ctataaggtg ctcgacggtt cggttggccc cgaggttgtc
     8761 gatattcgca aattctacgg cgagacgggg atgttcacgt acgaccccgg cttcacatcg
     8821 actgcgagct gccagagcgc gatcacttat atcgacggcg aaaagggtat cctcctccac
     8881 cgcggctatc ctatcgacca gctcgcggag caatcgacct tcatggaagt cgcctatttg
     8941 ctcctccacg gcgagctgcc caaccgcgaa gagctcgaca ccttcaccta caccatctcg
     9001 cgccacacga tgctccacga gcagctgatg atcttcttcc gcgggttccg gcgtgacgcc
     9061 cacccgatgg cgatcatgtg cggagtggtg ggtgcgctgt cggctttcta ccacgacagc
     9121 acagacatca ccgacccgca gcagcggatg atcgcctccc accggctgat cgccaagatg
     9181 ccgacgattg cggcgatggc gttcaaatat tcgatcggcc agccgttcct ctatcccgac
     9241 aacagcctca gctatacggc caatttcctg cggatgacgt tcggggtccc ggccgagcaa
     9301 tatgaaatca acccggtgat cgaaaatgcg atgcgccgga tcttcatcct tcacgccgac
     9361 cacgagcaga atgcgtcgac ctcgacggtc cggctagcgg gatcgtcggg cgccaatccg
     9421 ttcgcctgca tcgcggcggg gatcgcctgc ctgtggggcc cggcgcacgg cggcgccaac
     9481 gaagccgcgc tcaacatgct tcgcgagatc ggggatccga agaatatccc gagctacatc
     9541 gcccgcgcca aggacaagaa cgacccgttc cggctgatgg gcttcggcca ccgggtctac
     9601 aagaactacg acccgcgagc gaaggtgatg caggcgaccg cggaggaggt gctcaaggag
     9661 ctcaacatct ccgatccggt cctcgacgtc gcccaggagc tcgagcagat cgccctccac
     9721 gacgattatt tcatcgagaa gaagctctac cccaacgtcg atttctactc gggcgtgatc
     9781 ctcaacgcga tcggcttccc gaccgatatg ttcaccgcgc tgttcgcgct cgcccggacc
     9841 gtcggctggg ttgcccagtg gaacgagatg atctccgacc ccgagcagaa aatcggccgt
     9901 ccgcgccagc tctatgtcgg cgagacgaag cgcgagtacg tgccggtcga gaaacgataa
     9961 ggcggcgctt aggcgaccgg cagaaccagg gtgaatcgcg agccttctcc gggcgcgctc
    10021 ctgagctgaa tgtcgccgcc catcgcccgc gcaagccggc gagcgatcgc gaggccgagg
    10081 ccgctaccct ccccctcttc gctgcctttc tggaaagcct cgaaaattcg ttcgtggtcg
    10141 caggcgtcga ttcccgcgcc ctcgtcggcg acgtgaacca tcgccgattc ctgcgactgc
    10201 gcgaacgaca ctgtgacagt agtctggggc ggtgaatagc gcaccgcatt gccgatcagg
    10261 ttgaccagga tctggacgac gcttcgcgcc tggccacgag caaacaggca ctcgatcggc
    10321 tggacgccga tgatgattga gcgctcctgc gcctgcgagt cgaccagcgc gacggcctcg
    10381 gacgcgagct cggcgaggtc gacctggcca tcggcggcgg attcgccgtt ctcccccagc
    10441 gagcgcacga cggaaaggag gtggcgcgcc gcagtcgcga tgtcggccgc ataagcggtg
    10501 tagcgttcgc cgacagacga gtcagcggca gagcgcattt cctccgccga ctgcacgatc
    10561 cggtcaagcg gcgagcgaag cgccgtctga atggcgccgt cgagcgccgg tcgcccactc
    10621 tccgcaccgg agtcgccatc gaccacggcc gtaccttcga acccggcaaa ggcgccgtcg
    10681 gcggcgagca cgacactgcc gttaagcagg aactggcggc cgctgtcgcg agcgctgact
    10741 cgctggccct cgaagcctcc cctggacacg agtgcgtcga gaagcggcat ttcgccgtcc
    10801 tcgccctcct caaggcgaaa gtacttggtc agcggctcgc cggccgcatc ggccgcgtcg
    10861 cacgagagca attccgcgag tggcggtgca atctcgagca ggcgcaagtg atcgtcgacc
    10921 gaccagccaa gcggcttggc gacgaggctt tcatgttcga ccgccgacat tgcggcaagg
    10981 cgcggctgcg atgctggccg ggcagtccac cgctctatcg tgagtacgac gtcttcgtct
    11041 tccggaaccg cccgcaccca catatcgaca tcctgcccgc ggcccgcggc gaggacgcgc
    11101 cgtgacagcg ggattccgag gcgcttcgcg atccgcacga ttgccgcgag ctgggggagc
    11161 gccagcgagg agccgaggct cgagccggcc tcgacctgca atcgctccag ctcaggatcg
    11221 gcggcgacca gccggccgct agcgtcgacg cggccgagga tcggtctggg gtcagagggt
    11281 gcgctggcca tggcccgaag ccaatgtttc gatcgccgag cgataggcgg gatcgagccg
    11341 aagccatttg cgcgcgctgt ccacgtcctg ctcggacagc gaatcgaagg cggaaatttc
    11401 gctttcgggg tctgccgcga cgacctccgc gagacgggca atgacctcgc cggcaagtgt
    11461 tcgcgaggcg ccgctcattc gaagcagcaa ggccaggcca cctgcccctg tgaggtgctc
    11521 ccatgcgggc tggaacgaga ttccggccgt tcgtccgagt acctcggcaa gcagcgacgc
    11581 ttccccttcg tcgagagcgg agcgaatcag gctttcatcg agccgctccg cctcgccaag
    11641 cgcatgaacg agatcgaaaa gccgcgcttc gaggcgatta ccttcgtcgt ggccggcaag
    11701 cacggacagg ctggctgtcc cgagccgctc gtcggcatcg gccggatcga ggcgtttgac
    11761 gagatcggtt cgaagcgcgg cagcgattgc gttcacgagc acgac
//
LOCUS       DATAKH010000031         7815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_686,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000031 DATAKH010000000
VERSION     DATAKH010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7815
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1584
                     /locus_tag="VHN55_01025"
     CDS             <1..1584
                     /locus_tag="VHN55_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011906740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2802555.1"
                     /translation="ARTIHSAGSDLLSLINDILDLSKIESGTVSIELGDMPLATLKQH
                     MERTFRQIAADKGLDFNVNFDSDLPDAIRTDEKRLQQVVLNLLSNAFKFTSKGGVTLD
                     VSCATGGWSPNHPVLRNSDSAIEIAVTDTGIGIPQEKQKLIFEAFQQADGTTSRKYGG
                     TGLGLSISREIARLLGGELQVRSKAGEGSTFTLFVPLEAASVPVVVSGDSGDARYENS
                     GAMVPSSLPGGMEVADDRDDLNGDPFVLIVEDDPTFASVLLDIARDSGLKGVVATAGS
                     GTLAMARKLQPNAITLDLGLSDIDGFVLLDLLKHDPDVGNVPIHVVSGSDRVERAMKA
                     GAFGVTEKPAEQKELAKLFRNLLKEAKKKPRRRAAAPATSATREMPELAGAKVLIVDD
                     DIRNIFSLTSVLESYNVEVLHAERGREGIEILANTPGIDVALIDIMMPDMDGYETMRE
                     IRRMPEIADLPLIAVTAKAMKGDRQKCLDAGASDYIAKPVDLDLLLALLRVWVTGSRD
                     TAQSQHSLVVGQRRSGSGE"
     gene            1587..3650
                     /locus_tag="VHN55_01030"
     CDS             1587..3650
                     /locus_tag="VHN55_01030"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2802556.1"
                     /translation="MGRASAEPLTEADPQVTAESGERPRVLIVDDDERNLLALKTILE
                     DVGEVVVANSGEEALRQLLKGEFAVILLDVFMPGMDGYETAQIIRDREQTKRIPIVFL
                     SAVNKETEHLMRGYAMGAVDYVFKPVDAVVLRSKVAVFVDLFAKTREIEKKARQEQAL
                     LDNALRANAERLKAEQGLRQAEQRQAAIIESMPILLYLEPLGCNPRCPKFVSGDLHAM
                     TGYSFADMLENADLWTERLHSEDRSKVLAALEERNSTGRLSVEYRWRCADGSFRHFHD
                     QAVLLKDGKGKPHEYAGTVTDVTDRRLLETQLVQAQKMDAIGKLTGGIAHDFNNLLAA
                     VLGGLGLIERRAELSGESKRILTMTKRAADQGSELVRRLLAFSRQQQLEPAPLDLNAI
                     HKGVDDLLTHTLGGLVELDWQVPADCWAPFADQSQLELALMNLIINARDAMRDGGTIT
                     VLVENRTLTTDDPLPLAEGDYVAISVIDRGCGIPADMIDKVLEPFFTTKDVGKGTGLG
                     LSMVYGFAKQSGGAFRLDSQVDEGTCAELWLPRSTGSQRRASSPNEKQEEPESHSPLR
                     ILLIDDHDEVRGTTAAMLSDLGHSTCEASSGSEAIELIQSPDNEFDLLITDYAMPRQS
                     GLEVVRIAREKQPELPAIIVTGYADEEEIGSRPSKVGLLMKPFTLAKLSAAVREASSG
                     QTAEE"
     gene            complement(3632..4021)
                     /locus_tag="VHN55_01035"
     CDS             complement(3632..4021)
                     /locus_tag="VHN55_01035"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2802557.1"
                     /translation="MHAFIIEDDYLIAQTLQDMLERLGYSKFSFARSEDAAVMGARTE
                     PIDLITADVRLLPGDGLQAVRTICDNRDIPAVFITGYADELIERAPDAVVVQKPLDEQ
                     DLRNAVQRVIGRGGGPAIPPGGYSSAV"
     gene            4259..4417
                     /locus_tag="VHN55_01040"
     CDS             4259..4417
                     /locus_tag="VHN55_01040"
                     /inference="COORDINATES: protein motif:HMM:NF022150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KGG domain-containing protein"
                     /protein_id="HEX2802558.1"
                     /translation="MANSRNGGSKRGFAAMSPEKQREIAAKGGRASHGGGRRPGSASS
                     RATQAATR"
     gene            4469..5221
                     /locus_tag="VHN55_01045"
     CDS             4469..5221
                     /locus_tag="VHN55_01045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX2802559.1"
                     /translation="MYRSDLNSRDKSGAIIAVAAVHGALLFALLHLSGRIDLAEPQSV
                     MNVFDITEQPPPPEEVQQPQPKPEEKPKPKEAEGAASEKNIRSRATPVAAPKPEIELP
                     VPVPVTTSETPNQGTEPTQGASTVVGPGTGAGGIGTGTGSGGAGSGTGGGGGGGYVIP
                     PRLLTPVLRGRDFPRPLLNAWPRGAQLFARVRVSPAGTVIQCIVDRGTGVPSIDSAVC
                     NLVEQRFRYSPARNRAGQPVAGWAGYRQEPPH"
     gene            5242..5931
                     /locus_tag="VHN55_01050"
     CDS             5242..5931
                     /locus_tag="VHN55_01050"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEX2802560.1"
                     /translation="MIEAEWWDYDSPDEMAEAVAGDIGFIVESALDARAAALIALPAD
                     DIARVIFPRLADASLQWKQVMIIPTDDRIVAVDDERSKARALAQAFLPKGARVVPIVT
                     PLDDYRLAGNSADARLQDLPWPPDLVWLSVGDDGSAAGIVTGPDLQDALDAPKARRAV
                     GTKPEDGGEARVTLTRASILSARTLLITLQGQDKRDMVEGAIADGQSSRLPIGRVLAE
                     AEQPIDIHWCP"
     gene            complement(5933..7588)
                     /locus_tag="VHN55_01055"
     CDS             complement(5933..7588)
                     /locus_tag="VHN55_01055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017670339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2802561.1"
                     /translation="MASVAEPNQHKPWSMSRVVIASSTGTAFEWYDFFIFGSLAPVIA
                     RSFFSALDPTPALIAALGLFAAGFAFRPLGALVFGVIGDRLGRKGAFLATVSLMGGAT
                     FLIGILPTYAQAGALAPAALIVLRILQGIALGGEYGGAAIYVAEHASDERRGSATGWI
                     QSSASFGLLAAMLIIFASRSWLGEEAFGAWGWRIPFLLSVFLLGISLWMRLKLSESPA
                     FAKLVEEGQVAKAPLREAFGERENLRRVLIAFFGIMLAQGAVWYFTFFYMQVYLEKSL
                     GMPASMKDLLLVVMTVVSAPLYVFFGWWSDRIGRKPVIVGGMALALLLYFPGSHWIAQ
                     AVNPALVQAQRTTPVVVETNPATCSAQFDPVGTAKFTSGCDIAKSVLISRGISYDTRS
                     SADGQTRVLVGSHAVPIGGGEGLPGPELKDLKASSSETIGTALHSAGYPKSADPARMN
                     LPVLIAVLLLFVVAATALYGPQAAALVEMFPTRVRYTAMSFPYHFGIGWVGGFLPVTS
                     FAIVAATGNIYSGLWYAVAFTGISVVVSLLFLPETRGRKLEEV"
BASE COUNT         1540 a         2489 c         2564 g         1222 t
ORIGIN      
        1 gcccggacga tccactcggc cgggtcggac ctgctgagcc tgatcaacga catcctggac
       61 ctgtcgaaga tcgaatccgg cactgtttcc atcgagctcg gcgacatgcc gctggcgacc
      121 ctcaagcagc acatggagcg caccttccgg cagatcgctg ccgacaaggg gctcgacttc
      181 aacgtcaatt tcgactccga cctgcccgac gcgatccgca ccgacgaaaa gcggctgcag
      241 caggtcgtgc tcaatttgct gtcgaacgcc ttcaagttca cgtcgaaggg cggagttact
      301 ctcgacgtca gttgcgcgac tggcgggtgg agcccgaacc atccggtcct ccggaattcc
      361 gatagcgcca tcgaaatcgc ggtaaccgac accgggatcg gaattccgca agaaaaacag
      421 aagctgattt tcgaagcctt ccagcaggct gacggcacga ccagccggaa gtacggcgga
      481 accggattgg gactgtcgat cagccgggaa atcgcgcgac tgctgggcgg cgaattgcag
      541 gtccgctcga aggccggcga aggctcgacg ttcactttgt tcgtcccact ggaggctgcg
      601 tccgtcccag tcgtggtaag cggcgatagc ggcgacgccc gctacgagaa cagcggcgcg
      661 atggtgccgt cgagcctgcc cggaggaatg gaggttgccg acgaccgcga cgacctgaac
      721 ggcgatccgt tcgtgttgat tgtcgaagac gacccgactt tcgcgtcggt actcctcgac
      781 atcgctcgtg actccggact gaagggcgtc gtcgcgaccg cgggatcagg aacgctggcg
      841 atggctcgaa agctgcagcc gaacgcaatc acgctcgacc ttggcctcag cgacatcgac
      901 ggtttcgtcc ttctcgactt gctcaagcac gaccccgacg tcggcaacgt gccgatccac
      961 gtcgtctcgg gctcggaccg cgtcgaacgg gcgatgaaag ctggagcgtt cggggtcacc
     1021 gagaagccgg ccgagcagaa ggagctggcg aagctgttca ggaacctgct caaggaggcg
     1081 aagaagaagc cgcggcgccg agccgccgcg ccggccacct cggcgactcg cgagatgccg
     1141 gaactcgcgg gagcgaaggt gctgatagtc gacgacgaca ttcgcaacat cttctcgctg
     1201 acgagcgtgc tcgagagcta caacgtcgag gttctccatg ccgagcgtgg ccgtgaaggc
     1261 attgaaatcc tggcgaacac tcccggaatc gacgtcgcgc tcatcgacat catgatgccg
     1321 gacatggacg gctacgaaac gatgcgggag attcgcagga tgccggagat cgccgacctg
     1381 ccgctcatcg cggttacggc gaaggctatg aagggcgacc gtcagaagtg cctcgatgcc
     1441 ggcgcttcgg actatatcgc caagccggtg gacctcgacc tgctgcttgc gcttctccgg
     1501 gtatgggtca ccggatcccg ggacacggct caaagccagc actcgctcgt tgtcggccag
     1561 cgtaggtcag gaagcgggga gtaagagtgg gacgtgcgtc cgcagagccg ctgacggaag
     1621 ctgatccgca agttacggcc gaatcaggcg aacgcccccg ggtgctcatc gtcgacgacg
     1681 acgagcgcaa cctgctcgcg ctcaagacga tactcgagga tgtcggcgag gttgtcgttg
     1741 ccaactcggg cgaggaggcg ctcaggcagc tgctcaaggg cgagttcgcg gtcatcctcc
     1801 tcgacgtgtt catgcccggc atggatggtt atgaaaccgc ccagatcatc cgcgatcgcg
     1861 agcagacgaa gcgaattccg atcgtcttcc tgtcggcggt caacaaggaa accgagcacc
     1921 tcatgcgcgg ctatgcgatg ggtgccgtcg attatgtgtt caagccggtc gacgccgtcg
     1981 tcctgcgctc taaggtcgcg gtgttcgtcg acctgttcgc gaagacccgc gaaatcgaga
     2041 aaaaggctcg ccaggaacag gccctgctcg acaatgcgct gcgcgcaaat gccgaacggc
     2101 tgaaggcgga gcaggggctt cggcaagccg aacagcggca ggcggcgatc atcgagtcga
     2161 tgccgatcct gctgtacctg gagccgctag gctgtaaccc gcgctgcccc aagttcgtca
     2221 gcggcgacct ccatgcgatg acgggctatt cgttcgcgga catgctcgaa aatgccgacc
     2281 tgtggacgga gcggctccat agcgaagacc ggagcaaggt gctcgctgca ctggaggagc
     2341 gcaactccac tggccgtcta tcggtcgagt atcgctggcg atgtgcggac gggagcttca
     2401 ggcacttcca cgatcaggcg gtgctgctca aggacgggaa gggtaagccg cacgaatatg
     2461 cgggcactgt caccgacgtg acggacaggc gcctgctgga gacgcagctg gtccaggcgc
     2521 agaagatgga tgcgatcggc aagctgaccg gaggaatagc gcacgacttc aacaacctcc
     2581 tcgcggcggt cctcggcggc ctcggactca tcgaacgtcg cgccgagctt tccggcgagt
     2641 ccaagcgaat cctgacaatg acgaagcgcg ccgccgacca ggggtcggag ctcgtgcgcc
     2701 gcctcctcgc cttctcgcgt cagcagcagc tcgagccggc gccgctcgac ctgaacgcaa
     2761 ttcacaaggg cgtcgacgat ctcctgaccc atacgctggg cggacttgtc gagctcgact
     2821 ggcaggtccc cgccgattgc tgggccccgt tcgccgatca gtcgcagctg gagctcgctt
     2881 tgatgaacct gatcataaat gcccgcgacg caatgcgcga cggcggcacg atcacggttc
     2941 ttgtggagaa ccggaccctg acgaccgacg atccgctgcc gctggccgaa ggcgactatg
     3001 tagcgatttc cgtcatcgat cgcggctgcg gcatcccggc cgacatgatc gacaaggtgc
     3061 tggagccgtt cttcacgacg aaggacgtcg gcaagggaac cggcctggga ctgagcatgg
     3121 tctatggctt tgccaagcaa tcggggggag cttttcggct cgacagccag gtggacgagg
     3181 ggacttgtgc cgaattgtgg ctcccccgct caaccggcag ccagcggcgc gcaagctcac
     3241 cgaacgaaaa gcaggaagag ccggaaagcc acagcccgct gcggatcctg ctcatcgacg
     3301 atcatgacga ggttcgcggg accaccgccg ccatgctgtc cgaccttggc cattccacct
     3361 gcgaggcttc aagcggaagc gaggccatcg aacttatcca gtcgccagac aatgaatttg
     3421 acctgctgat caccgattat gcgatgcctc ggcaaagcgg cctggaagtg gtgcggatcg
     3481 cccgcgaaaa gcagccggaa ctgccggcga tcatcgtcac cggctatgcc gacgaagagg
     3541 agatcggcag ccggccaagc aaggtcgggc tgctgatgaa gccttttacc ctcgcgaagc
     3601 tgtccgccgc cgttcgcgag gcatcgagtg gtcagacagc ggaagaatag ccgccgggcg
     3661 gaatggccgg gccgccgccg cgcccgatga cccgctgcac ggcgttgcgc aagtcctgct
     3721 cgtcgagcgg cttctgtacg acgacagcgt ccggggcacg ctcgatcagt tcgtcggcgt
     3781 agccggtgat gaaaaccgcc ggaatgtccc gattgtcgca aatcgtgcgg acggcctgga
     3841 ggccgtcgcc cggcaacagc cgaacgtcgg cggtgatgag gtctatcggt tcggtgcgag
     3901 cgcccatcac cgctgcatcc tcggatcgcg cgaagctgaa ttttgaatag ccgagccgct
     3961 ccagcatgtc ctggagggtc tgagcgatga gatagtcgtc ttcaattatg aatgcgtgca
     4021 ttggactgcc tcgcgggcga ccgttgcccg gcgggcagta caacgccgct gctgacagga
     4081 gtttccgggc aagtcgagat tacggcgctt ggctcggacg ccgtcggaag atgcgcgtct
     4141 gcattcggcc gctttcctca taacctgcat cagcagtgtg aactcccgct gcaaacgcgc
     4201 gttggcgggt tgctcgaaag cggtgctgaa cgactggaga gccgaggagg aaacgaaaat
     4261 ggcgaatagc aggaatggcg gatccaagcg cggtttcgct gcgatgagcc ccgaaaaaca
     4321 gcgcgaaatt gcagccaagg gcggtcgcgc cagccacggc ggcggacgcc ggccgggcag
     4381 cgccagctcg cgcgcgacgc aggcggcgac ccgttagtca ctcgtaacgg caactgacct
     4441 gtgcgagccc gcgttaccaa cgcggcaaat gtacaggtcc gacctcaaca gccgcgacaa
     4501 gagcggcgca atcatcgcgg tggcggcggt ccacggcgcg ctcctgttcg cgctgctcca
     4561 cctgtccgga cggattgacc tggccgagcc gcaaagcgtg atgaacgtgt tcgacatcac
     4621 cgagcagccg ccgccacccg aagaggtcca gcaaccgcag ccgaaaccag aggagaagcc
     4681 caagccgaag gaggccgaag gcgcagccag cgaaaagaac attcgaagca gggcgacccc
     4741 ggtagccgcc cccaagcccg agatcgagct tcccgtgccg gtgccggtca cgacttcgga
     4801 gaccccgaac caggggacgg agccgaccca gggcgcctcc accgtcgtcg gcccgggcac
     4861 gggcgcgggc ggaatcggta cgggaaccgg ttccggaggt gccggcagcg ggacgggcgg
     4921 cggcggaggt ggcggttacg tgataccgcc gcggctcctt actccggtcc tgaggggacg
     4981 cgattttccg cggccactcc tcaatgcctg gccgcggggt gcccagctgt tcgcccgagt
     5041 ccgggtcagc ccggcgggga cggtgatcca gtgcatcgtc gaccgcggca ccggagttcc
     5101 gtcgatcgat tcggccgtct gtaacctcgt cgagcagcgc tttcgctaca gtcccgcgcg
     5161 caaccgggca ggtcagccgg ttgcgggatg ggcaggatac cggcaggagc ctccgcacta
     5221 gccgagacga ggagagcgga agtgatcgaa gccgaatggt gggactatga ttccccggat
     5281 gagatggccg aggccgttgc gggcgacatc ggcttcatcg tcgagagcgc gctcgatgcc
     5341 cgcgccgccg cgttgatcgc gctgcccgcg gatgacattg ctcgcgtcat cttcccccgg
     5401 cttgccgacg ccagcctgca gtggaagcag gtgatgatca tcccgaccga cgacaggatc
     5461 gtcgccgtcg acgacgagcg aagcaaggcg cgggcgctgg cgcaggcttt ccttccaaag
     5521 ggcgcgcggg tggttccgat cgtgactccg ctcgacgatt accggctcgc cggaaatagc
     5581 gccgatgcgc ggctccagga cttgccgtgg ccgcccgacc tcgtctggct aagcgtaggc
     5641 gatgacggaa gcgcggccgg gatcgtcacc gggcccgacc tccaggatgc gctcgacgcg
     5701 cccaaggcaa ggcgggcggt cggaaccaag ccggaggacg ggggcgaggc gcgagtcacg
     5761 ctgacccggg cctcgatcct atcggcgcgc acgctgctga tcacccttca gggacaggac
     5821 aagcgcgata tggtcgaagg cgccatcgcc gatggacaga gttcgagact gccgatcggc
     5881 cgggtgctcg ccgaggccga gcagccgatc gacatccact ggtgcccctg agctagacct
     5941 cttccagctt ccgcccgcga gtctcgggca ggaacaggag cgagacgacc accgaaatgc
     6001 cggtgaaggc gaccgcgtac cacaagccgg agtatatgtt gccggtggcg gcgacgatcg
     6061 cgaagctcgt caccggcaag aaaccgccga cccagccgat cccgaaatga taggggaagg
     6121 acatggccgt gtagcggacg cgagtcggga acatctcgac cagcgccgcc gcctgcgggc
     6181 cgtagagcgc ggtggccgcg accacaaaca gcagcagcac ggcaatcagc accggcaggt
     6241 tcatccgcgc cggatcggcg ctttttggat agcccgccga atgcagcgcc gtgccgattg
     6301 tctcgctgga gctcgccttc aggtccttga gctcgggccc tggaaggccc tcgccgccgc
     6361 cgatcggtac agcgtgcgat ccgaccagga cacgagtctg gccgtcggcc gaactgcggg
     6421 tgtcgtagga gattccgcgg ctgatcagga cgcttttggc gatgtcgcag ccgcttgtga
     6481 acttggccgt tccgaccggg tcgaattggg ccgagcaggt cgcgggattg gtttcgacca
     6541 cgactggtgt cgtccgctgc gcctgaacga gcgccgggtt cacggcttga gcgatccagt
     6601 gcgaaccggg gaagtagagg agcagcgcaa gtgccatccc gccgacgatg accggcttac
     6661 gcccgatccg gtcggaccac cagccgaaga agacgtagag cggggcgctg acgaccgtca
     6721 tcaccaccag cagcaggtcc ttcatcgacg ccggcattcc aagcgacttc tcgagataga
     6781 cctgcatgta gaagaaggtg aagtaccaca ccgcgccttg ggcgagcatg atcccgaaga
     6841 aggcgatgag gacccgcctg aggttctcgc gctcgccgaa cgcttcgcgg agcggcgctt
     6901 tcgcgacctg cccctcctcg accagctttg cgaacgccgg gctttccgac agcttgagcc
     6961 gcatccacag cgaaattccg agcaggaaca ccgacagcag gaacgggata cgccaccccc
     7021 aggcgccgaa cgcctcctcg ccgagccagc ttcgcgatgc gaatatgatc agcattgcgg
     7081 ccagtagccc gaaggacgcc gacgactgga tccagccggt ggcgctcccc cgtctttcgt
     7141 cggacgcatg ctcggcgaca tagattgcgg cgccgccata ttcgccgccc agcgcaatgc
     7201 cctgcaggat ccgaagcact atgagcgccg ccggcgcgag cgctccggcc tgcgcgtaag
     7261 tgggaaggat tccgatcagg aacgtcgcgc cgcccatcag gctgacggtt gcaaggaagg
     7321 cgcccttgcg gccgaggcgg tcgccgatga ctccgaaaac aagcgcgccg agcggtcgga
     7381 aagcgaagcc ggcggcgaac aggccaagtg cggcgatcag cgccggagtc ggatcgagcg
     7441 ccgagaagaa ggaccttgcg atcaccggcg cgaggcttcc gaaaatgaag aaatcgtacc
     7501 attcgaacgc cgttccggtc gacgacgcga tcaccacccg cgacatcgac cacggcttgt
     7561 gctgattcgg ctccgccacg ctcgccatca tctctcccct cccgctgcaa aaagggatag
     7621 cggcgcggcc ggctcacgca agttcgcttc gccaccgcgt atgtcgacgc tgtcgaacct
     7681 gctcaagaag gtcagggaat acccagatcg atcgtccaga acctcaagta gtgggggcta
     7741 cagcctcccc gcgagcagcg agtcgacgac cgacggatcc gcgagcgtcg acgtatctcc
     7801 gaaaccgctc tctgc
//
LOCUS       DATAKH010000032        11527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_16211,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000032 DATAKH010000000
VERSION     DATAKH010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11527
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16211"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..1390
                     /locus_tag="VHN55_01060"
     CDS             293..1390
                     /locus_tag="VHN55_01060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2802562.1"
                     /translation="MPVTLDRRRFVAAASATLLSACATVSPRVPVAGCSPLPSVDVDP
                     ARLIRTVAGLRPYRASGFVVRREQLGDKALVHNYGHGGGGITLSWGSSKLATELGLSG
                     HSGPVAVLGSGVMGLSTARLVQDAGFPVTIYAAAMPPDTTSNIAGGQFFPHRVFERSS
                     ASPEFLAQFTRALDYSWRRFQLMVGDDYGIRWLPTYENSRRTERPLLPTFPPVNRLLE
                     QAEHPFPFETMLRYDTLYVETGRYLRQLLRDFRVAGGKVALRNFASPADIMALTEPLV
                     FNCTGLGSRDLFGDLELRPARGQLAILLPQPEVNYAASGRWGYMFPRADGILLGGTFE
                     LDEWSTDTQPEAIARIVEAHREVFSQFRCTA"
     gene            1423..2766
                     /gene="hslU"
                     /locus_tag="VHN55_01065"
     CDS             1423..2766
                     /gene="hslU"
                     /locus_tag="VHN55_01065"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEX2802563.1"
                     /translation="MNYQAPIPTTGTPDLLKDKLTPKAIVAALDEHIVGQDDAKKAVA
                     VALRNRWRRQQLSPELRDEVTPKNILMIGPTVCGKTEISRRLAKLADAPFVKVEATKF
                     TEVGYVGRDVEQIARDLVEEAVRLERDRRREKVRKGAEDAAMERLLDALTGKGSSTAT
                     RDSFRARFEDGSLDKAEVEIEVSEAPSLPFDIPGQNGVSMINLSDMMAKMTGGPPKQR
                     RKLKVPDAFARLSEEEADKRVDPDDINRVALADAEANGIVFLDEIDKIAVSDVRGGSV
                     SREGVQRDLLPLIEGTTVATKYGPLKTDHILFIASGAFHTAKPADLLPELQGRLPIRV
                     ELKALTEEDFVRILSQTRASLTEQYKALLGTEDVTIEFADDGIAALARIAAEVNDSVE
                     NIGARRLQTVMEKLLEDVSFEAEDRKGETLTIDSAFVDGQLAGIARNADLSRYVL"
     gene            2834..4336
                     /locus_tag="VHN55_01070"
     CDS             2834..4336
                     /locus_tag="VHN55_01070"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX2802564.1"
                     /translation="MSIGRTISIFIAAVAALPAVEALAQEPATAAAPVKDWGVIARQD
                     VEAAYELYVENHPGMHDPGNPGFPEQLKKARDAALAVAAMAHDREGYSRALARFTGEL
                     GDGHAQVYAPAPEGEAPRTRLWPGFVAAWRGEQMIVHRAAPDLPVPSGSAILSCGGAP
                     VPELVSRRLMGALRAREAGQWWSRAPQAFMAFEGYTDDAPRSCRFRTPAGDVRDLELT
                     WVPAPSDHSKWMTSATDGERTAIGLSQPRQGIFLIGMPTFGPDPDEVKAYRSLFESLG
                     EKRAELKAARAVVIDLRHNNGGSSTWSREAARKLWGKEIVDHRLDDFLKEVRIWWRAS
                     EGNTAYMKEMEDNLRADGNADVADAVHEIGAGMKAALANGEKFYVEGEEKDSQPAAGP
                     LSPTDFTVPVYVITPGRCASACLDAIDAFKLFSNVKLIGAPTSADSTYMEVRRAALPS
                     GEGMIVIPNKVWMHRPRGSGEFYTPDIEMTAADWSTAAFLDRIEADLSRR"
     gene            complement(4323..5042)
                     /locus_tag="VHN55_01075"
     CDS             complement(4323..5042)
                     /locus_tag="VHN55_01075"
                     /inference="COORDINATES: protein motif:HMM:TIGR02117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02117 family protein"
                     /protein_id="HEX2802565.1"
                     /translation="MSERKPKRVRYRRRRTKPTLVGRLLTALLAIPAAYMVAALVGSF
                     VPVNSGWTEPEQGITVYLADNGIHTDIIMPASAQGLDWAPLVPRRDTAAGRANARWVA
                     FGSGEEQVYLETPTWWDISPATIWAALTGSRRVMHVEWVSDPAYAAREIRLRPDEYRR
                     LWAAVRSDFELGREGRPMRVDHPGYGCCDAFYRGTGRFNALKTCNSWTADKLRIAGVK
                     TSLWPPFTSGLLWRYRKVSGG"
     gene            5085..5161
                     /locus_tag="VHN55_01080"
     tRNA            5085..5161
                     /locus_tag="VHN55_01080"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5119..5121,aa:Pro,seq:ggg)
     gene            5250..5534
                     /gene="yajC"
                     /locus_tag="VHN55_01085"
     CDS             5250..5534
                     /gene="yajC"
                     /locus_tag="VHN55_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEX2802566.1"
                     /translation="MSAMLIGILPWVLIFVIFYVLLIRPQQKRAKEHQAEIASVKKGD
                     EVVTGGGLRGRVTKVSDAEVEVEIAQGVKVRAVKSTLAQVVKPNAKPAND"
     gene            5547..7133
                     /gene="secD"
                     /locus_tag="VHN55_01090"
     CDS             5547..7133
                     /gene="secD"
                     /locus_tag="VHN55_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEX2802567.1"
                     /translation="MLDFPRWKVLSIWAVIVLGIIFAVPSVIPKSYTLPSWLPSARIS
                     LGLDLAGGSQLLLEADAQDLTKQRLEAMEETISTEMQRGDPPIAISSVSTSGGRVTFA
                     VTNPAQVDAAVERMRALTQPVGLTGTRDWDVGVVDLNRIVLTPTGGGSRQALKDALTV
                     ARDVVRRRIDPQGTKEVTVINQGDRRILVQVPGVENPDALKKLIGQTARLEFKLVDLT
                     ADPAQVQQGRAPAGSQVLPMADGSGFMAVKRRVMVSGEQLSDAKQGFDQDGRPVVDIT
                     FNAAGARRFGRTTQENVGKPFAIILDDKILSAPNINEPILGGRAQISGGFTVETANDL
                     AISLASGKLPVKLNVIDERTVGAELGKDSIQKGIVASIVATFAVIAFMLATYGRFGVY
                     ATLALIANAVMILAGLAIFGSALTLPGIAGFVLTIGAAVDANVLINERIREEQRRGRK
                     VIDSIEHGYREASTAIFDANITNVIAAALMWYFGSGPVRGFAVVLMIGIITSVYTAVN
                     FTRMLVAQWVKRSRPRTLHI"
     gene            7144..8094
                     /gene="secF"
                     /locus_tag="VHN55_01095"
     CDS             7144..8094
                     /gene="secF"
                     /locus_tag="VHN55_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008066215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEX2802568.1"
                     /translation="MRLLKLVPDATNIDFMRWRNFALVLSIVVTVISIAIVGVRGLNL
                     GVDFVGGQMVRATFAQPINVEQLRTNVSRLQLGDSNIQEVGGPRTYQIRLPTPEGGPA
                     AASRAITKVRTMILTEYPNARVDAGESVSGKVSEELARDGALAIGLAMLGIAIYIWFR
                     FEWQFGVGALLTLFHDVAMTLGFFSLTQLQFDLNVVAAILTIVGYSLNDTVVIYDRIR
                     ENLRKFRKMSIVPLLNLSLNETLSRTMVTSISILLALGMLLLFGPDVIFGLTIAIFVG
                     IFVGTYSSIYISSPVLVWLGVTPDSFVRGDGSDVPETQAS"
     gene            8170..8976
                     /locus_tag="VHN55_01100"
     CDS             8170..8976
                     /locus_tag="VHN55_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX2802569.1"
                     /translation="MSNITRIAAVAIAAALLLPASGCARNKTTADTGYIARDVNTLYA
                     LAKQKLDQGDYRQAAKLFDEVERQHPYSMWARRAQLMSAFSYYVARQYNEAIASAQRF
                     LTIHPGNKDAPYAHYLVAMSYYQQVTDVTRDQASTAQALNAFGELIRRYPESRYASDA
                     RLKMDLLNDHLAGKEMEIGRFYERSGKWLAANLRFRKVVEDYQTTSHTPEALERMVET
                     YLALGIPEEAHKAAAVLGANYPGSEWYERAYKLIQKHSPSPQPPQPQPQG"
     gene            8993..10645
                     /gene="recN"
                     /locus_tag="VHN55_01105"
     CDS             8993..10645
                     /gene="recN"
                     /locus_tag="VHN55_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEX2802570.1"
                     /translation="MLRQLAIRNVVLIDRLEIEFDSGLGVLTGETGAGKSILLDALGL
                     ALGARADSALVRQGEESASVTAEVELPADHPAHQLLNNQGLDCDPGEPLLLRRTLKSD
                     GGSRAFVAASAVPAGIVRDVAALVVEIHGQHDDRGLLNPRGHRALLDAFARIDTQPIE
                     DAWRQVTEVEQALAQARAAAAEAERDRDYLAHAVGEIETLDPQAGEETSLAEERAAIQ
                     AGAKAGEALDGLDQLLGGSEGALAQLRQAARRIERGAEDHPALAEALAALDRALIEAH
                     DAEDKIARAADSLAHDPARLEAVEARLFDIRGLARKHRVEPDSLAELGARMRAQLAEI
                     EAGGERIEALDAQLEQARLAYSKLAVELSTRRHEAAAKLDAAVAGELAPLKLDSARFR
                     TAVAAAEPGPSGTDRIEFEVSTNPGAPFGPLTKIASGGELSRFILALKVALAEAGSAA
                     TMIFDEIDRGVGGAVASAIGERLARLSVQSQVLVVTHSPQVAARAAHHYRIEKSHENG
                     ATRTIVRRLSADERREEIARMLSGASITEEARAQASRLLDAA"
     gene            10642..11163
                     /locus_tag="VHN55_01110"
     CDS             10642..11163
                     /locus_tag="VHN55_01110"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEX2802571.1"
                     /translation="MTAYVALLRGVNLVGRSSLKMADLKAIADRLGLGSARTYIASGN
                     LLFTSDEPEDSLRTMLETELQAHMGKAVRVALRTAEEMEAAVLANPFGGEPGNRVQAF
                     FLDGPPPKDLMETVRHKADDERIAVGPREVYVAYGERGIGRSRLRIPAAEAGTGRNMN
                     TVRKLAEMAKEKA"
     gene            11160..>11527
                     /locus_tag="VHN55_01115"
     CDS             11160..>11527
                     /locus_tag="VHN55_01115"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2802572.1"
                     /translation="MSRETAVPLEFEGEQLEGVFVGRRDGAARPTVILIPTVMGVSDL
                     EIGFGKQLVELGYNAFVADLFGKEFRNAPRDTMFGEMARLKGDRAALRRRLLAILEQV
                     RGLDEAEGDSIVAAGYCFGG"
BASE COUNT         2126 a         3730 c         3732 g         1939 t
ORIGIN      
        1 caccgggatg actgcgaacg ggtcgaacac gagagtgcgg atggcgaatt cgacgatcac
       61 gacgaatggc accggcgtat tgattaccaa caacgggatc atcaacacat acggcacgaa
      121 ccggctcgac gggaatccga cgaacggcgc cttcaccgcg cccgtcattc cgcagaaatg
      181 accggctgac ggcagcgacg gcggaacaac taccgtcttc gtcccgagcg aagtcgaggg
      241 ctccggcgct cgacgtctcg acttcgcccg gcacgaacgg cagggtgggg tgatgccagt
      301 cacccttgac cgccgtcgct tcgttgccgc cgcatcggct acgctgctgt ccgcctgcgc
      361 gaccgtgtcg ccgcgggttc cggttgccgg ttgcagtccg ctgccgtcgg tggatgtcga
      421 tccagcccga ttgatccgca cggtcgccgg ccttcgtccc tatcgcgcct ccggtttcgt
      481 cgtccgccgc gagcagctcg gcgacaaggc gctggtccac aattacggcc acgggggcgg
      541 cgggatcacg ctcagctggg gaagctcgaa gctcgcaacc gaactcggac tctccgggca
      601 cagcggcccg gtcgcagtgc ttggctccgg cgtaatgggg ctgtcgaccg cacggctggt
      661 ccaggacgcg ggctttccgg tgacgatcta cgcagccgca atgccgcccg acacgacgtc
      721 gaacatcgcc ggcgggcaat tcttcccgca ccgcgtcttc gagcgctcat cggcgagccc
      781 cgagttcctt gcgcagttca ctcgcgctct cgattacagc tggcggcggt tccagctgat
      841 ggttggcgac gattacggca ttcgctggct gccgacctat gaaaattcgc ggcggacgga
      901 gcgccccctc ctcccgacct tcccgccggt caaccgcctg ttggagcagg ccgagcatcc
      961 gttccccttc gaaaccatgc tccgctacga cacgctctac gtcgagaccg gtcgctacct
     1021 tcgccagctg cttcgcgatt tccgggtcgc cggcggaaaa gtagcactcc gcaactttgc
     1081 gtcccccgcc gacatcatgg ctctcaccga accgctcgtg ttcaattgca cgggacttgg
     1141 cagccgcgac ctgttcggcg acttggagct tcgcccggcg cgcggccagc tcgcaatcct
     1201 gcttccgcaa ccggaagtga attatgcagc gagcggtcgc tggggttaca tgtttccccg
     1261 ggcggacggg atattgctcg gcggcacttt cgagctcgac gaatggtcga cggatacgca
     1321 gccggaagcg attgcgcgaa tcgtcgaagc acaccgcgag gtattctcgc aattccgctg
     1381 cactgcttga acggcggtcc ggcgcctcca atctagcggc ggatgaacta tcaggctcca
     1441 atccccacca ccgggacacc cgatttgctc aaggacaagc tgacccccaa agcgatcgtc
     1501 gccgcgctcg acgagcatat cgtcggccag gacgatgcca agaaggcggt cgccgtcgcg
     1561 cttcgcaacc gctggcgccg gcagcaactc tcgcccgagc ttcgcgacga ggtcacgccc
     1621 aagaacatcc tgatgatcgg ccccaccgtc tgcggcaaga ctgagatcag ccggcggctg
     1681 gcgaagcttg ccgatgcgcc cttcgtcaag gtcgaggcga ccaagttcac cgaggtcggc
     1741 tatgtcggcc gcgacgtcga acagatcgcc cgcgaccttg tcgaggaagc ggtccggctg
     1801 gagcgcgatc ggcgccgcga aaaggtccgc aagggcgccg aggacgcggc gatggagcgg
     1861 ctcctagacg cgctgaccgg caagggatcg agcaccgcca cccgcgacag cttcagggca
     1921 aggttcgaag acggaagcct cgacaaggcc gaggtcgaga tcgaggtctc cgaagcgccg
     1981 tcgctgcctt tcgacatccc cggtcagaac ggcgtcagca tgatcaacct gtccgacatg
     2041 atggcgaaga tgacgggcgg tccgcccaag cagcggcgga agctgaaagt tcccgacgcc
     2101 ttcgcccggc tcagcgagga agaggccgac aaaagggtcg acccggacga catcaaccgg
     2161 gtcgcattgg ccgacgccga agcaaacggg atcgttttcc tcgacgagat cgacaagatc
     2221 gcggtcagcg acgtccgcgg cggatcggtc agccgcgaag gcgtccagcg tgacctgctg
     2281 ccgctgatcg agggaaccac ggtcgcgacc aaatatggcc cgctcaagac ggaccatatc
     2341 ctgttcatcg catcgggcgc cttccacacc gccaagccgg ccgacctgct tcccgagctc
     2401 cagggccgtc ttccgatccg ggtcgaactg aaggcgctga ccgaggagga cttcgtccgc
     2461 atcctgtcac agaccagggc cagcctgacc gaacagtata aggcgctgct cggcaccgag
     2521 gacgtcacca tcgaattcgc cgacgacggc attgccgcgc tggcccgaat cgctgcggaa
     2581 gtgaatgatt cggtcgagaa tatcggcgcc cgaaggcttc agacggtcat ggaaaaactg
     2641 ctcgaggacg tcagcttcga ggccgaggac cgcaagggcg agacgctgac gatcgattcg
     2701 gcattcgtcg acgggcagct cgccggaatc gccaggaacg ccgacctcag ccgctacgtg
     2761 ctctgaacac ctcttggcgc ggcggaatta gcgaatagac agtcaccggg gcgtaacgag
     2821 cgggagtggg tgggtgagca tcggtcgaac aatctcgatt ttcattgcgg cggttgccgc
     2881 gctgccggcc gtcgaagcgc ttgcgcaaga gcccgcaact gccgcggcgc cggtcaagga
     2941 ctggggagtc atcgctcgcc aggatgtcga ggctgcctat gagctatacg ttgaaaatca
     3001 tccggggatg cacgatcccg gcaacccggg ttttcccgag cagctgaaga aagctcgcga
     3061 cgcggcgctc gccgtggcag caatggcgca tgacagggag ggctattcgc gggcgctagc
     3121 acgtttcact ggcgagcttg gcgacgggca cgcccaggtt tacgcgccgg cgcccgaggg
     3181 ggaggcgccg cggactcggc tctggccggg tttcgttgcc gcgtggcgcg gagagcagat
     3241 gattgtccac cgcgcagcgc cggatttgcc cgttccgagc ggctctgcaa tcctttcttg
     3301 tggcggggcg ccggtgccgg agctcgtcag tcgccgcctg atgggagctt tgcgggccag
     3361 ggaggccggg cagtggtggt cgcgtgctcc gcaagcgttc atggcattcg aggggtacac
     3421 cgacgacgct ccgcgtagct gtcgctttcg cacgcccgcc ggcgacgtgc gtgacctgga
     3481 gttgacctgg gtcccagccc cgtcggacca ttcgaaatgg atgacttcag cgaccgacgg
     3541 cgaacgcacc gcgatcgggc ttagccaacc gaggcaggga atcttcctta tcgggatgcc
     3601 gactttcgga ccggatccgg atgaggtgaa ggcctatcgg tcgctattcg aatcgcttgg
     3661 cgaaaaaagg gcggagctga aggccgcacg ggcagtcgtc atcgatcttc gccacaacaa
     3721 cggaggctct tcgacctgga gccgggaagc ggcccgcaag ctttggggca aggaaattgt
     3781 cgaccaccgc ctggacgatt tcctcaagga agtgcggatc tggtggcgag caagcgaagg
     3841 caacaccgca tatatgaagg agatggagga caacctccgt gcggacggca acgctgacgt
     3901 cgccgacgca gttcacgaga tcggtgcggg catgaaggcc gcacttgcga acggtgagaa
     3961 attttacgtc gagggcgagg aaaaggactc tcaaccggca gccgggccgc tgtccccgac
     4021 ggacttcacc gttcccgtct acgtcatcac gccgggtcgt tgcgcgagcg cctgcctcga
     4081 tgcgatcgac gcgttcaaac tgttttcgaa cgtgaagctg atcggcgctc cgacatctgc
     4141 cgattcgacc tacatggaag tgcgacgagc ggcgctgccc tccggtgaag gcatgatcgt
     4201 gattccgaac aaggtgtgga tgcaccgccc gcgcggatcg ggcgaattct atacccccga
     4261 catcgagatg accgcggcgg actggtcgac agcggccttc ctcgaccgga tcgaagcaga
     4321 cctcagccgc cgctgacctt ccgataccgc catagcaggc ccgaagtgaa cggcggccac
     4381 agactggtct tcacgccggc gattcgaagc ttgtcggccg tccagctgtt gcaggtcttc
     4441 agcgcgttga agcgtccggt gccgcggtaa aaggcatcgc agcagccgta gccgggatgg
     4501 tcgacgcgca ttggacggcc ctcgcgccca agctcgaagt cggaacggac ggcggcccac
     4561 aggcgccggt actcgtccgg ccggaggcgg atctcgcgag cggcataggc cgggtcgctg
     4621 acccattcga cgtgcatgac ccggcggctg ccggtcaatg ccgcccagat cgtcgcgggg
     4681 ctaatgtccc accacgtcgg agtctccaaa tagacctgct cctcgcccga accgaacgcc
     4741 acccagcggg cattcgcccg gcccgccgcg gtatccctcc tcggcaccag cggcgcccaa
     4801 tcgaggccct gcgcggaggc gggcatgatg atatcggtgt ggattccgtt gtcggccaga
     4861 tagacggtga ttccctgctc gggctcggtc cagccgctat tgaccggaac gaatgagccg
     4921 acgagcgccg cgaccatata tgcggcggga atcgcgagca gcgccgtcag cagccgcccg
     4981 acgagcgtcg gcttcgttcg gcgccgcctg tatcgaactc gcttcggctt gcgttcgctc
     5041 atgcccctgc ctagatgcgc ctcgccgtcg gaaacaacgg cagtcggggc gtagcgcagc
     5101 ctggtagcgc atcacactgg gggtgtggag gtcgctggtt cgaatccagt cgccccgacc
     5161 atcccgccaa ggaagtctct tagcgaatgt ccaccctctc cctcttcgaa ttcaccgccg
     5221 cagcagccgg cgccggccag ccgggcggaa tgtcggcgat gttgatcgga atccttccct
     5281 gggttctcat tttcgtcatc ttctacgtcc ttctgatccg tccgcagcag aagcgcgcga
     5341 aggaacacca ggcggaaatc gcatcggtca agaagggcga cgaagtcgtc accggcggcg
     5401 ggcttcgggg ccgggtcacg aaggtttccg acgcggaggt ggaagtggag attgcgcaag
     5461 gcgtaaaggt tcgcgccgtt aagtcgacgc ttgcgcaggt ggtcaaaccc aacgccaagc
     5521 cggccaacga ctaggcatcc gcggccatgc tggatttccc gcgctggaag gtgctttcga
     5581 tctgggcagt aatcgtcctc ggcatcatct ttgccgtgcc gagcgtgatt ccgaagtcct
     5641 acacccttcc atcgtggctc ccgagcgccc ggatcagcct cggcctcgac cttgccggcg
     5701 gcagccagct gctgctcgag gccgacgctc aggacctgac gaagcagcgc ctcgaggcga
     5761 tggaagaaac gatcagcacc gagatgcagc gcggcgaccc gccgatcgcg atttcgtccg
     5821 tgtcgaccag cgggggccga gtgaccttcg cggtcaccaa tccggcccag gtggatgccg
     5881 ccgtcgagcg catgcgcgcc ctgacccagc ccgtcgggct gaccggcacc cgcgattggg
     5941 acgttggggt cgtcgacctc aaccggatcg tccttacccc gaccggcggc ggctctcgcc
     6001 aggcgcttaa ggatgcgttg acggtcgcac gcgacgtcgt ccgccggcga atcgacccgc
     6061 aggggactaa agaggtcacg gtcatcaacc agggggaccg gcggatcctg gtccaggtcc
     6121 ccggagtcga gaatcccgat gcgctgaaga agctcatcgg ccagacagcc cggctcgagt
     6181 tcaagctcgt cgacctcacc gccgatcccg cccaggtcca gcagggccgg gcgcctgcgg
     6241 gaagccaggt gctgccaatg gccgacggct ccggcttcat ggccgtcaag cggcgggtga
     6301 tggtctcggg agagcaactg tcggacgcca agcaaggctt cgaccaggac gggcgtccgg
     6361 tggtcgatat caccttcaac gccgcggggg cgcgccgctt cggccggacg acccaggaga
     6421 atgtcggcaa gccgttcgct atcattctcg acgacaagat cctgtcggct ccgaacatca
     6481 acgagccgat cctcggcggc cgggcgcaga tcagcggcgg ctttacggtc gagacagcca
     6541 acgacctcgc gatctcgctt gcttcgggca agctcccggt gaagctcaac gtgatcgacg
     6601 agcgcaccgt gggcgccgaa ctcggcaagg attcgattca aaaaggcatc gtcgcaagca
     6661 tcgtcgccac cttcgcggtg atcgccttca tgcttgctac ctatggccgc ttcggagtct
     6721 atgccacgct cgcgcttatc gccaatgcgg tcatgatcct ggccggccta gccatattcg
     6781 gctccgcgct cacgcttccg ggaatcgccg gcttcgtgct cacgatcggt gccgccgtcg
     6841 atgcgaacgt gctgatcaac gagcgaatcc gagaggaaca gagacgcggc cgaaaggtga
     6901 tcgattcgat cgagcacggg taccgggaag cctcgaccgc gattttcgac gccaacatca
     6961 ccaacgtcat cgccgccgct ttgatgtggt atttcggatc gggtccggtc cgcgggttcg
     7021 cggtcgtcct gatgatcgga atcatcacct cggtgtacac ggcggtcaat tttacccgaa
     7081 tgctggtcgc acagtgggtc aagcgctcgc gtccgcgaac gcttcacatc tgaggattag
     7141 ccgatgcgtc tcctgaagct cgttcccgac gccaccaaca tcgatttcat gcgatggcgc
     7201 aacttcgcgc tcgtgctgtc gatcgtcgta acggtcatca gcattgcgat cgtcggggtt
     7261 cggggcctca atcttggcgt cgatttcgtc ggcggccaga tggttcgagc gacgttcgca
     7321 cagccgatca atgtcgaaca gcttcgcacc aacgtgagcc gcctgcagct cggcgactcg
     7381 aacatccagg aagtcggggg tccgcgaacc taccagattc ggcttcccac cccggaaggc
     7441 ggcccggccg ccgcaagccg cgcaatcacc aaggtgcgga ccatgatcct caccgaatat
     7501 ccaaacgccc gagtcgatgc cggcgaatcg gtttccggaa aggtcagcga ggagcttgcg
     7561 cgcgacggcg ccctggcgat cggcctggcg atgctcggaa tcgcgatcta catctggttc
     7621 cggttcgaat ggcagttcgg cgtcggtgcg ctgctaacgc tgttccacga cgtggccatg
     7681 acgctcggat tcttctcgct gacgcaactc cagttcgacc tcaacgtcgt cgcggcgatc
     7741 ctgacaatcg tcggctactc gctgaacgat acggtcgtga tttacgaccg gatccgcgaa
     7801 aacctgcgga agttccggaa gatgtccatc gtgccgctgc tcaatctctc gctcaacgag
     7861 actttgtcgc ggacgatggt gacgtcgatc tcgatccttc tcgctctcgg catgctcctg
     7921 ctgttcgggc ctgacgttat cttcgggctg acgatcgcca ttttcgtcgg cattttcgtc
     7981 ggcacctatt cctcgatcta tatctcgtct ccggtcctgg tgtggctggg ggtaacgccc
     8041 gacagcttcg tcagggggga tggttcggac gttcccgaaa cgcaggcgag ctgagccgtt
     8101 caccgcaggt tcgtcatccg cgtcgcactt cgacttgcct gcctgacagc cgacgctaat
     8161 gaggactgaa tgtcgaacat cacccgcata gcggccgtag cgattgccgc cgcgctcttg
     8221 cttcccgcgt ccggttgcgc gcgcaacaag accacggccg acaccggtta catcgcccgc
     8281 gacgtgaaca ccctctacgc gctcgccaag cagaaactcg accagggcga ttaccgccag
     8341 gcagcgaagc tgtttgacga ggtcgagcgg cagcaccctt attcgatgtg ggcccgccgg
     8401 gcgcagctga tgagcgcctt cagttattat gtagcaaggc aatataacga ggcgatcgcg
     8461 tcggctcagc ggttcctgac gatccatccc ggcaacaagg acgcgcctta cgcgcattac
     8521 ctggtggcga tgagctatta ccagcaggtg acggacgtca ctcgcgacca ggccagcacc
     8581 gcccaggcgc tcaacgcgtt cggcgagctc atccgccgct atccggaaag ccgctacgca
     8641 tccgacgcgc gcctcaagat ggacctgctg aacgaccatc tcgccggcaa ggaaatggaa
     8701 atcggccgct tctacgaacg gtccggcaag tggcttgccg ccaatctgcg gttccgcaag
     8761 gtcgtcgaag attaccagac caccagccat acgcccgaag cgctggagcg gatggtcgaa
     8821 acctatctcg cgctcggaat tccggaagag gcccacaagg ccgctgccgt cctgggcgca
     8881 aattatcccg gcagcgagtg gtacgaacgc gcgtacaagc tgatccagaa gcactcgcct
     8941 tcgccacagc cgccgcagcc gcagccgcag ggatgaacac cgcgagccgc tgatgttgag
     9001 gcagctcgca atccgcaacg ttgtccttat cgatcgtctc gagatcgagt tcgattcggg
     9061 acttggagtg ctcaccggcg agaccggagc gggcaagtcg atccttctgg atgccctcgg
     9121 cctggcgctt ggcgcccgcg ccgacagcgc gctcgtcagg cagggcgagg agagcgcgtc
     9181 ggtgactgcc gaagtcgagc ttccggccga tcatccggct caccagctac tgaataacca
     9241 gggcctggac tgcgatcccg gcgagccgct gctcctgcgg cggacgctaa agagcgacgg
     9301 cggaagccgc gccttcgtcg ctgcttcggc ggttcctgcg ggaattgtcc gggacgttgc
     9361 cgctttggtc gtcgaaatcc acggccagca cgacgaccgc gggcttctca atcctcgcgg
     9421 ccaccgggca cttctcgacg cattcgcaag aatcgacacg cagccgattg aagacgcctg
     9481 gcgacaagtg acggaggtcg agcaggcgct tgcacaggct cgcgcggcgg ctgccgaggc
     9541 cgagcgcgac cgcgattacc tggcgcatgc cgttggcgaa atcgaaacgc tcgatccgca
     9601 agccggcgaa gagacgagcc tcgccgagga gcgcgctgcg atccaggccg gcgccaaggc
     9661 cggggaagcg ctggacgggc tcgaccagct tctcggcggc tccgaaggag cgcttgccca
     9721 gctccgccag gccgccaggc ggatcgaacg cggggccgag gaccatcccg cgctcgcaga
     9781 ggcgctggcg gcgctcgacc gggcgctcat cgaggctcac gatgccgaag acaagatcgc
     9841 gcgcgcggcg gactccctag cccacgaccc agcgcggcta gaggcagtcg aagcccggct
     9901 gttcgacatc cgtgggcttg cccgcaaaca ccgggtcgaa cccgattcgc tggccgagct
     9961 aggcgcgagg atgcgggcgc agcttgcaga aatcgaggcc ggcggagagc ggatcgaagc
    10021 gctcgacgcg cagctggagc aggcacggct ggcttattcg aagctggccg tggagttgag
    10081 caccaggagg catgaagccg ccgccaagct tgatgcggcg gttgccgggg agcttgcgcc
    10141 gctgaagctg gactcggcgc ggttccggac cgcggttgcg gctgccgagc cggggccgtc
    10201 cggcaccgac cgaatcgagt tcgaagtgtc gaccaaccca ggcgctccgt tcggaccgct
    10261 gacgaaaatc gcgtcgggcg gcgaactttc gcgcttcata ctcgccctga aagtggcgct
    10321 cgccgaagcg gggagcgcgg caacgatgat cttcgacgag atcgaccgcg gcgtcggcgg
    10381 cgcggtggca agcgcgatcg gcgaacggct ggcgcgattg tcggtgcagt cgcaggtgct
    10441 ggtcgtcact cactcgccgc aagtggccgc ccgcgcggcg caccactacc ggatcgagaa
    10501 atcgcacgaa aacggcgcga cgcgcaccat cgtccggcgg ctgtcggcgg acgagcggcg
    10561 cgaggaaatc gcgcggatgc tttcgggtgc gtcgatcacc gaggaggcga gggcgcaggc
    10621 gtcgcggctc ctcgacgctg catgacggcc tatgtcgcgc ttctgcgcgg cgtgaacctg
    10681 gtcggccgaa gcagcctcaa gatggccgac ctgaaggcca tcgccgatag gctcgggcta
    10741 ggatcggcgc ggacctatat cgccagcgga aacctgcttt tcaccagcga cgagcccgag
    10801 gacagccttc gaacaatgct cgaaacagag ctgcaggcgc atatgggcaa ggcggtacgg
    10861 gtcgcgctcc gcaccgcgga ggaaatggaa gcggcggttc tcgccaaccc gttcggcggc
    10921 gagccgggaa accgggtgca ggccttcttt ctcgatggtc cgccgccgaa agatctgatg
    10981 gaaactgtcc gtcacaaggc tgacgacgag cggatcgcgg ttggtcctcg cgaggtctat
    11041 gtcgcatatg gcgaacgcgg tatcggacgg tcgcggctgc gcatccctgc tgccgaggcc
    11101 gggaccgggc gcaacatgaa cacggttcgg aaactggccg aaatggcgaa ggagaaggca
    11161 tgagcaggga aactgcggtc ccactcgagt tcgagggcga acagcttgaa ggtgtcttcg
    11221 tcggcaggcg cgacggtgcc gcgcggccga ccgtgatcct gattccgacg gtgatgggcg
    11281 tttccgacct ggagatcggc ttcggcaagc agctcgtcga gctcggctac aatgcgttcg
    11341 tcgcagacct gttcggcaag gaattccgca acgctcctcg cgacacgatg ttcggcgaaa
    11401 tggcgcggct gaaaggcgac cgggcggcgc tacgccggcg gttgcttgcc attctcgaac
    11461 aggtgcgtgg cctcgacgag gccgaggggg attcgatcgt cgccgccgga tattgcttcg
    11521 gcggaat
//
LOCUS       DATAKH010000033         5211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_709,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000033 DATAKH010000000
VERSION     DATAKH010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5211
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VHN55_01120"
     CDS             <1..368
                     /locus_tag="VHN55_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2802573.1"
                     /translation="LDGELRLKSKPNIRFAGQITGCEGYVESAAVGLMAARFAAAELR
                     NETLPPPPPETAIGALLAHITGGADSETFQPMNVNFGLMPPVGGRARKADRKKAYTDR
                     ARASFADWLASQSAELVAC"
     gene            719..1690
                     /locus_tag="VHN55_01125"
     CDS             719..1690
                     /locus_tag="VHN55_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802574.1"
                     /translation="MSDLQQIAATAPLRLEPFLVAAALAQRAGDYDRAEVLLRQARVR
                     DPRSPAALYLLADVSLRKGKTVEGLHNMAILSRILPETSVQLTPALAEYAQTPGARQE
                     LAGILAENRQLKRPLLIALAADPDNADLILDLAGPAGRTAGSDSKVWQSRLLEGLVAR
                     GDYERAHSLWRQFAGVGEGPRPLLFNGEFKRLDAPPPFNWSFSSADAGFSEPGNNGRL
                     RILYYGRDDSVLASQLLLLPPGTYRFRAPVSGRVAAGTLAFALRCRGTGNTLVNVPIR
                     EPAAEANFTVPSGRCGAQLIQLRGHAQEMPEDSDVRVGPARIERVGG"
     gene            1744..3036
                     /locus_tag="VHN55_01130"
     CDS             1744..3036
                     /locus_tag="VHN55_01130"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX2802575.1"
                     /translation="MGGSSTTIWTNLALQIGGVAMIGWAAIARPRQHLDQRATGAYLL
                     LAFGLLVVLLQLIPLPPAIWTELPGRHQLAEALSALGQAPSWAPISQDSYGSVLTLFA
                     IIPAIAVFVATERLGPSPRGIGLAIVAGMIGSVFLGALQLGGGSGSWAYLQARHSPGA
                     IGFFANENHMATLLLVAIPMTAALVVSAKSERKLSSAARYGVGAALLLMVAVGIVMNG
                     SRAALGLALPVVLASATIFATAMRWRGLMVTVAALALAGGVVVVASNPIAPVETSTGD
                     SSALMRPAIWSTTADAIGDTFPAGTGLGTFERAYHWYEDAADVGRQYINHAHNDYLEV
                     VLELGAGGALLILLFLAWWALAAIRIWSSALATPFARAAMIATAVILAQSFVDFPLRT
                     GAISAIFGACLGLMAQHLRAPAVAKPGEFRPTRHVKLG"
     gene            3292..>5211
                     /locus_tag="VHN55_01135"
     CDS             3292..>5211
                     /locus_tag="VHN55_01135"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNVR domain-containing protein"
                     /protein_id="HEX2802576.1"
                     /translation="MNRDLIVTRDESWDVLPHLDAGAGQEIHSGMDLSRLLRIFREWR
                     MVILACGAVGLLAAIAITLSTTPMYRAGVVLEANPPTVQVISESTQSTGPNVDVYQFV
                     ATQMGLLQSRGLAERVAQDLGLARDPEFADQDAAPARRVQQAARAIEANLQVDQQKDG
                     QLISFSFIWQQPELAAKIANAYADAFIDTSLQRRYEASAYARNFLQRQIASTRRELEK
                     SERQLVQYAQAQGIINSGSGGSQQGNDASSPQGQSLVALNAALADATARRVAAEGAYR
                     QAVAVGATKDVTDSTQALRQARAALQAEYQEKRTLMKPEHPEMASLRSRITELDRQIG
                     REAATATSGVVNSALAAYRAALSAEQALRAQVAGLKSQVLDLRGRSIQYAILQRDVDT
                     NRALYDALLQRYKEIGVAGGIGASPVSIVDRADAPTAPFKPNALLNVLLGLTLGLLGG
                     VVAAIGLDILNDTIRTPSDVRKKLGLPCLGAIPKRSGNAKRTGLLEELDDPTSPAAES
                     YATLATSLRFTTDEGLPNALLVTSARAAEGKSSTTLALCHHFAKLGKTVLLIDADLRK
                     PSFRGESNEKGLTALLTTEDSLAEHVTATKYANLWLLHCGPEPPNPAALLASSRFRAI
                     ISEGCSQYDIVVVDSL"
BASE COUNT          914 a         1683 c         1690 g          924 t
ORIGIN      
        1 tcctcgacgg cgagctgcgg ctcaaatcca aacccaacat ccgcttcgcc ggccagatca
       61 ccggctgcga aggctatgtc gaaagcgccg cggtcgggct gatggcggcc cggttcgcgg
      121 ctgccgagct tcgcaatgag actctgccgc cgccgccgcc ggaaacggct atcggtgcgc
      181 tcttggcgca catcaccgga ggcgcagact cagagacgtt ccagccgatg aacgtcaact
      241 tcggcctgat gccgccggtt ggcggacgag cgcgcaaggc ggatcggaag aaggcctaca
      301 cggaccgggc gcgggcgtcc ttcgccgact ggcttgcaag ccagtcggcc gaactcgtgg
      361 cctgctgaca cgatcgaatc ggccgaattc cgggggggac tatcattttc gtcagaagct
      421 gacagaacaa cagccatggt ggtggattca acagggatgg cgggcgcatt gcccgccgga
      481 gtggaggcgt agcctgaaac gcgggcgggg atccccggcg actgcaattg ccatcgtcct
      541 cgtcgcggtc gtcacggcgg cggaagtcgc tcgcctgacc ttagccgctg ccgtcgccga
      601 ggacaggacc gagctcgcga cgcgcctggc gcccgaagct cctcccgtcc tcgctgcaac
      661 cgccatggcg cagatcgggc aagccgcggc ggtaggggga aatccgagcc cggagacgat
      721 gtccgacctg cagcagattg cagcaaccgc gccacttcgg ctcgagccgt tccttgtcgc
      781 cgcggcgttg gcgcaaaggg ccggagacta tgaccgtgcg gaggtcctgc tgcgtcaggc
      841 gagggtgcgc gatccccggt ctccggccgc gctttacctt ctcgccgatg tttcgcttcg
      901 caaaggcaaa acggtcgagg gattgcacaa catggcgatc ctgtcgcgaa tcctgcccga
      961 gacgtcggtc cagctcacac ccgcacttgc cgaatatgcg cagacccccg gggcgcggca
     1021 ggaactggcg ggcatcctcg ccgagaaccg ccaactcaag agaccgctcc tgatcgcgct
     1081 cgctgccgat ccggacaatg ccgacctgat cctggacctt gcggggccgg ctggccggac
     1141 cgccggcagc gacagcaagg tctggcaatc gcgcctgctc gaagggttgg tcgctcgtgg
     1201 tgactatgag cgcgcccaca gcctgtggcg gcaattcgcc ggggtaggcg aggggccaag
     1261 gccgctgctc ttcaacggcg agttcaaacg ccttgatgcg ccgccgccgt tcaactggag
     1321 cttctcctct gcggatgccg gattctccga gcccggcaac aacggaaggc ttcgaatcct
     1381 ctactacggc cgggacgatt cggtgttggc ttcgcaactc ctgctattgc cgccggggac
     1441 ctatcgcttc cgggcgccgg tgagcggccg ggtcgcagcc ggcacacttg cgtttgcgct
     1501 tcgctgtcgc gggaccggca acacgctggt gaacgtcccc attcgcgagc ccgcggcgga
     1561 ggcgaacttt actgttccgt cgggccgctg tggcgcgcag ctcatccagc ttcgcggcca
     1621 cgctcaggag atgccggagg atagcgacgt ccgagtaggc ccggcgagaa tcgagagggt
     1681 cgggggttga aggagcgaat tccatcgtac gtcgttgcgg cctacctttt gctgtgcatc
     1741 gggatgggcg gcagctccac gacgatatgg accaatctcg cccttcagat cggcggcgtt
     1801 gcaatgattg gctgggcggc gatcgcgcgg ccccgccaac atttggatca gcgggcaacc
     1861 ggagcatatt tgcttcttgc cttcggactg ctggtcgtcc tgctccagct cattcccttg
     1921 ccgccagcca tttggaccga gttgccaggg cggcaccagc ttgccgaagc attgtcggcg
     1981 ctcggccagg ctccatcctg ggcgccgatt tcccaggatt catacggatc ggtcctgacc
     2041 ttgtttgcaa tcatcccggc gattgcagtg ttcgttgcaa cggagcggct cggaccgtca
     2101 ccgcgcggca tcggcctggc catcgtggct ggcatgatcg gctcggtttt cctcggtgcg
     2161 ctgcagctcg ggggagggtc ggggtcatgg gcctatctgc aagcccgtca tagccccgga
     2221 gcgatcggct tcttcgccaa cgaaaatcac atggcgacgc tgctgctggt cgcaatcccg
     2281 atgaccgccg cgctggtcgt gtcggcgaaa tcggaacgca agctctcgag cgcagcccga
     2341 tacggagtgg gggcagcgct actgctgatg gtcgccgtcg ggatcgtgat gaacggctcg
     2401 cgggcggcgc ttggcctcgc cttgccggtg gtcctcgcaa gcgcgaccat ttttgcgacg
     2461 gccatgcggt ggcgcggcct aatggtgacg gtggccgcgc ttgcgctcgc aggaggcgtc
     2521 gtcgtggtcg cgagcaaccc gatagcgcct gtcgagacaa gtaccggcga ttcctccgcg
     2581 ctaatgcggc cggcgatctg gagcacgacc gcggatgcga tcggcgacac ctttccggcg
     2641 ggaaccgggc ttggaacctt cgaacgggct taccactggt acgaggacgc tgccgacgtc
     2701 ggccgccagt acatcaatca cgcccacaac gactatctgg aggtcgtgct tgagcttgga
     2761 gcagggggag ccctgctgat cctgctcttc cttgcgtggt gggccctcgc tgcaattcgc
     2821 atctggagct ctgcgctggc gaccccgttt gcgcgtgccg cgatgattgc gacggccgtg
     2881 atactcgccc agtcattcgt cgacttcccg ctgcgcaccg gagcgatctc cgccatcttt
     2941 ggcgcctgtc ttgggttgat ggcccagcat cttcgagcac ccgcagtcgc caagccaggc
     3001 gaatttcgac caacgcggca cgtgaagctc ggataagttc ggccatcgat gcggcgattc
     3061 acatctcagc ggcgttcaac tccaatgaaa tgcttggcct tgggggccag tccttgcaaa
     3121 attgttgtga caatgccttt acttgcgttg catcgggagt gtcgcgaaag tacagcactc
     3181 tgcccgcagg ctgatcactg gtgctcgggt cagaagtgag gtctagatga ctatagctga
     3241 aaccaggccg gcacttccgg ctggggcacc ggcagaggac ggagtaaccg cttgaaccgc
     3301 gacctaatcg taacccggga cgaaagctgg gacgtccttc cgcatctcga tgcgggtgcg
     3361 ggacaggaga tccactccgg gatggacctg tcgaggctgc ttcggatttt ccgagagtgg
     3421 cggatggtca tccttgcctg tggggcggtt ggactgctcg cagccatcgc gatcaccctt
     3481 tcgacgacgc ccatgtaccg cgcgggcgtc gtgctcgagg caaacccgcc gaccgtccag
     3541 gtgattagcg agagcaccca atcgacgggg ccgaacgtcg atgtctacca gttcgtcgcg
     3601 acgcagatgg ggctgttgca gagtcgcgga ctggcggagc gcgttgccca ggatctcgga
     3661 ttggccaggg atcccgaatt tgccgaccaa gatgcagcgc ccgctcggcg cgtgcaacag
     3721 gccgccaggg caatcgaggc gaacctccag gtcgaccagc aaaaagacgg gcagctcata
     3781 agcttcagct tcatttggca gcagcctgag ctggcggcga aaattgccaa tgcctatgcg
     3841 gatgcgttca tcgatacgag cttgcaaagg cggtacgagg cctcggctta cgcccgcaac
     3901 ttcctgcaac ggcagattgc cagcacccgc cgcgagctag agaagtccga acggcagctg
     3961 gtccagtacg cgcaggccca gggaatcatc aacagcggct caggcggctc tcagcagggc
     4021 aatgacgcct cttccccgca aggtcagtct ctggttgcgc tgaacgccgc gctcgccgac
     4081 gcgacggcac ggcgtgtcgc cgccgaaggc gcctatcgcc aggcggttgc ggtcggcgca
     4141 accaaggacg tcaccgacag tacgcaggca ctgcgccagg cgcgcgcggc cttgcaggcc
     4201 gagtatcagg aaaaacgcac gctgatgaag ccggaacacc cggagatggc gagtctgcgg
     4261 tctcgaatca ccgagctcga ccgtcagatc ggtcgggaag cagccactgc gacgtccggc
     4321 gtcgtcaatt ccgccctggc cgcctacagg gccgcactct ccgccgagca ggcattgagg
     4381 gcgcaggtcg ccggactgaa gtcgcaggtc ctcgaccttc gcggccgcag catccagtat
     4441 gcgatcctgc agcgtgacgt cgacaccaac agggcgctct atgatgcgct cctgcagcgc
     4501 tacaaggaaa tcggagtcgc cggcgggatc ggtgcatcgc cggtttcgat cgtcgaccgg
     4561 gctgacgccc cgactgctcc gttcaaaccc aatgcccttc tgaacgtcct gctcgggctt
     4621 accctgggcc tgttgggcgg agtcgtcgcc gcgatcgggc tcgacatcct caacgacacg
     4681 atcaggacgc cctcggatgt tcggaagaaa ctggggctgc cctgccttgg ggcgattccg
     4741 aagcgatccg gcaacgccaa gcgcaccggc ttgctggagg agctcgacga cccgacatcg
     4801 ccggcggccg aatcctatgc cacgctggct acgtcgcttc ggttcaccac cgacgaaggc
     4861 ctgccgaacg ccctattggt gacgagcgcg agggctgcgg aagggaagtc ctcgacgaca
     4921 ctggcgctgt gccaccattt cgcgaagctc ggcaagacgg tcctgctgat cgatgccgac
     4981 ctcaggaagc cgagcttccg cggcgaatcc aacgaaaagg gcctcactgc cctgctcacg
     5041 accgaggact cccttgcgga gcacgtcacc gcgacgaaat atgcaaatct ctggcttctt
     5101 cactgcggcc cggagccgcc caacccggcg gcgctgctgg ccagctcgcg gttccgggcg
     5161 atcatttcgg aaggctgctc gcaatacgat atcgtggtcg tcgactcgct g
//
LOCUS       DATAKH010000034        14057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_24381,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000034 DATAKH010000000
VERSION     DATAKH010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 14057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14057
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24381"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..786)
                     /locus_tag="VHN55_01140"
                     /pseudo
     CDS             complement(1..786)
                     /locus_tag="VHN55_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010185134.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
     gene            856..1350
                     /locus_tag="VHN55_01145"
     CDS             856..1350
                     /locus_tag="VHN55_01145"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEX2802577.1"
                     /translation="MSLRPRITLVVARSLNGVIGRGGTLPWHIPADLKRFKAVTMGTV
                     MIMGRKTFESLPGLLPGRRHIVLTRDRDWQAEGAEVAHSAEEALALAGSEPVAVIGGA
                     DVFALFLPIADRVELTEVVDDIEGDTVMPDPRKQADWAETEVEVHAPDNGRPGFRFVT
                     LDRA"
     gene            complement(1347..1874)
                     /locus_tag="VHN55_01150"
     CDS             complement(1347..1874)
                     /locus_tag="VHN55_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEX2802578.1"
                     /translation="MKFAIALLLLAVPAPAAAEVVTASANGFELRHSVEVPLLPAEAF
                     AAFGQVQSWWGADHTYSGKSANLSLKLLPGGCFCEALPNGGGIEHLRVTYVDPGKRAV
                     LTGALGPLLYEAVAAVMDVKVDKIPGGSRVTMTYKASGFAAGNADKLAPLVDQVLSGQ
                     LDAYRDFASPEPDQR"
     gene            complement(1905..2555)
                     /locus_tag="VHN55_01155"
     CDS             complement(1905..2555)
                     /locus_tag="VHN55_01155"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017499627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEX2802579.1"
                     /translation="MNIILLGPPGAGKGTQAARLESNRGMVQLSTGEMLRAAVAKGTP
                     VGLKAKAVMEAGELVSDAIVSALIGERLDSIGDKGAIFDGYPRTRAQAEALDLLLADR
                     GRKLDGVIELDVDEEALVERITGRFSCAKCGAPYHDRYKLPKTEDTCDVCGSHDFKRR
                     PDDNEETVRTRLAEYRAKTAPILPYYEERGLVRRVEGMAPVDDVAAAIDAILDGLE"
     gene            complement(2580..3947)
                     /gene="secY"
                     /locus_tag="VHN55_01160"
     CDS             complement(2580..3947)
                     /gene="secY"
                     /locus_tag="VHN55_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEX2802580.1"
                     /translation="MASAAEQLASSISLANFSKATELKKRLWFTLGALVLFRFMSYVP
                     IPGVDPAAMQALFDTQSGGVLDIFNTFSGGALERMSVIALGVMPYITASIVVQLGATM
                     YGPWQALRKEGEAGRKKLNQYTRYLTVLLVLVQGYMVVRGLESQSVRQGIQAVVEPGL
                     VFEAAGTISLVGGTLFLMWLGEQITSRGIGNGISLIIMAGIVAHLPQSVAQLFEGGRT
                     GTMDPLLVALIIFLTLGLVAFICFVERAQRRVLVQYPKRQTARGAMQQERSHLPIKIN
                     TAGVIPPIFASSLLLMPLTVIQWMGSSAQSGTSTSDWLITISTYLQHGSPLYMLIYGA
                     GIIFFTFFYTAVQFNSEETAENLKKHGGFIPGIRPGKATEHYFDYLLTRVTVVGSIYL
                     ALICLVPEFLFAQAGVPFYLGGTSLLIVVNVTMDTVTQIQSHLIAHEYGNLIKKAKLK
                     SGRRR"
     gene            complement(4072..4617)
                     /gene="rplO"
                     /locus_tag="VHN55_01165"
     CDS             complement(4072..4617)
                     /gene="rplO"
                     /locus_tag="VHN55_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010403710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEX2802581.1"
                     /translation="MKLNEIRDNEGARKGRMRVGRGIGSGKGKTAGRGQKGQKSRSGV
                     SIWGFEGGQMPLHMRLPKRGFNNPFARDYAEVNIGAVQKAIDSGKLDSKGTLDHDALK
                     GAGLARGGRDGVRLLGKGELKAKLSVRVAGISKGAREAVEKAGGSVEIIEAKNPAELA
                     AAKKGKARDARLADKAAKAEA"
     gene            complement(4672..4851)
                     /gene="rpmD"
                     /locus_tag="VHN55_01170"
     CDS             complement(4672..4851)
                     /gene="rpmD"
                     /locus_tag="VHN55_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEX2802582.1"
                     /translation="MAKIKITQTGSPIRRDKTQRATLVGLGLNKMGRTVEVEDTPDVR
                     GQVRKVQHLVAVEGA"
     gene            complement(4857..5681)
                     /gene="rpsE"
                     /locus_tag="VHN55_01175"
     CDS             complement(4857..5681)
                     /gene="rpsE"
                     /locus_tag="VHN55_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007164606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEX2802583.1"
                     /translation="MVQENETPEVTKDGVEEAQVEVPAKEDAVVETEGSAEPAPHEPP
                     QEQERPRGGRGGRGPGGGGRGGPGGGRGRGGGDRGGRGRRDDRRGGRGGDDGGEELIE
                     KLVHINRVSKTVKGGKRFGFAALVIVGDGKGRAGFGHGKAREVPEAISKATAAAKKAM
                     IRVPLRDGRTLHHDGLGHFGAGRVTIRTAPAGTGIIAGGPMRAIFESLGVADVVTKSV
                     GTSNPYNMIRATFEALKEQTSPRSVAQRRGKKVADLLGRGGASTAEAEAQAEAITE"
     gene            complement(5682..6035)
                     /gene="rplR"
                     /locus_tag="VHN55_01180"
     CDS             complement(5682..6035)
                     /gene="rplR"
                     /locus_tag="VHN55_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEX2802584.1"
                     /translation="MAKLSLFDRRRQRVRSALRAVSSGKPRLSVHRSGRHIYAQVIDD
                     SAGRTVAAASTLDKELKGKANATREGAAAVGKAIAERAKKAGVSSVVFDRGGFLFHGR
                     VKALADAAREGGLEF"
     gene            complement(6038..6571)
                     /gene="rplF"
                     /locus_tag="VHN55_01185"
     CDS             complement(6038..6571)
                     /gene="rplF"
                     /locus_tag="VHN55_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEX2802585.1"
                     /translation="MSRIGKRAVALPAGVSASTEDRTLSVKGPKGTLQLQMRDEIRYD
                     ISEDGISVVPANDSKEARAFWGMQRTLVQNLVTGVTEGFSKTLEISGVGYRAQAQGKN
                     LRLQLGYSHDVNFSVPEGVEVKTPDQNTVEISGIDKQKVGQVAAEIRRWRKPEPYKGK
                     GIKYRGEYIFRKEGKKK"
     gene            complement(6571..6966)
                     /gene="rpsH"
                     /locus_tag="VHN55_01190"
     CDS             complement(6571..6966)
                     /gene="rpsH"
                     /locus_tag="VHN55_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEX2802586.1"
                     /translation="MAMNDPLSDLLTRIRNGQQARKDSVLTPASKLRAYVLDVLQREG
                     YIRGYSEEAIAGQQGLRIELKYFEGQPAIQHLARVSKPGRRVYSGAKDLPRIRNGLGV
                     VIVSTPRGVLSDAEAREQNVGGEVLAEVF"
     gene            complement(6978..7283)
                     /gene="rpsN"
                     /locus_tag="VHN55_01195"
     CDS             complement(6978..7283)
                     /gene="rpsN"
                     /locus_tag="VHN55_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEX2802587.1"
                     /translation="MAKLSSINKNERRRKLVEKYASKYEKLKAIANDESRDETERLIA
                     RLKMAEIPRNGNPTRIRNRCELTGRSRAYYRKFRLSRIMLRELANKGLIPGVIKSSW"
     gene            complement(7315..7965)
                     /gene="rplE"
                     /locus_tag="VHN55_01200"
     CDS             complement(7315..7965)
                     /gene="rplE"
                     /locus_tag="VHN55_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007682158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEX2802588.1"
                     /translation="MADNETKVEEAEVAEKKAAKPAKPAGKSYTPRLRADYDERIVKA
                     MIAKFGYKSRFEVPRLEKIVINMGVGEGTNDKKLVEKAASEMEAIAGQKPVIAKAKKS
                     IAQFKLREGMPIGCKVTLRRERMYEFLDRLVTIALPRVRDFRGLNPKSFDGRGNYAMG
                     LKEQIVFPEINYDDIDKVRGMDVIVTTTAKTDEEARELLRLFNFPFPAEAEEKQAA"
     gene            complement(7958..8275)
                     /gene="rplX"
                     /locus_tag="VHN55_01205"
     CDS             complement(7958..8275)
                     /gene="rplX"
                     /locus_tag="VHN55_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013933988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEX2802589.1"
                     /translation="MAQKIKKGDTVVILAGKDKGKTGEVTKIIPKEDRVLVSGVNVHA
                     RHRKPTQLNPQGGIERKEAPLHISNVAIADPKSGEPTRVRFEERDGKKVRVAAKSGEL
                     ING"
     gene            complement(8275..8643)
                     /gene="rplN"
                     /locus_tag="VHN55_01210"
     CDS             complement(8275..8643)
                     /gene="rplN"
                     /locus_tag="VHN55_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEX2802590.1"
                     /translation="MIQMQSNLDVADNSGAKRVQCIKVLGGSKRRVAGVGDIIVVSVK
                     EAAPRGRVKKGDVHRAVIVRTAKDIRRPDGSVIRFDSNAAVLVNKADEPIGTRIFGPV
                     VRELRAKKHMKIISLAPEVL"
     gene            complement(8833..9072)
                     /gene="rpsQ"
                     /locus_tag="VHN55_01215"
                     /pseudo
     CDS             complement(8833..9072)
                     /gene="rpsQ"
                     /locus_tag="VHN55_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
     gene            complement(9087..9296)
                     /gene="rpmC"
                     /locus_tag="VHN55_01220"
     CDS             complement(9087..9296)
                     /gene="rpmC"
                     /locus_tag="VHN55_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEX2802591.1"
                     /translation="MAAIDDLKVKTDDQLQQQLLELKREQFNLRFQSATNQLEKPSRV
                     TEVRRTIARIKTLQNQRAGQQAAKA"
     gene            complement(9298..9732)
                     /gene="rplP"
                     /locus_tag="VHN55_01225"
     CDS             complement(9298..9732)
                     /gene="rplP"
                     /locus_tag="VHN55_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010411135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEX2802592.1"
                     /translation="MLQPKRTKFRKAFKGRIHGNAKGGTELNFGAFGLKAMEPERITA
                     RQIEAARRAIQRHIKRAGRLWIRVFPDVPVSSKPAEVRMGSGKGSPEFWVARVKPGRI
                     LFELDGIPGPLAKTAFERAAEKLPIKTKVVARLGEKLVEEER"
     gene            complement(9751..10461)
                     /gene="rpsC"
                     /locus_tag="VHN55_01230"
     CDS             complement(9751..10461)
                     /gene="rpsC"
                     /locus_tag="VHN55_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010545726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEX2802593.1"
                     /translation="MGQKTSPVGLRLQINRTWDSRWFAEGQDYGRLLLEDLKIRRYIL
                     DLLPQAAISKVVIERPAKICRISIYAARPGVIIGKKGVDIEKLRKTLQSMTSSDVSLN
                     IVEIRKPEVDAKLVAQGVADQLERRIAFRRAMKRAVQSALRLGAEGIRITCAGRLGGA
                     EIARTEWYREGRVPLHTLRGNVDYAEAEAHTAYGACGVKVWIFKGEILGHDPTAQDRL
                     MMDAQTSGVRPARDDRRR"
     gene            complement(10465..10842)
                     /gene="rplV"
                     /locus_tag="VHN55_01235"
     CDS             complement(10465..10842)
                     /gene="rplV"
                     /locus_tag="VHN55_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEX2802594.1"
                     /translation="MGKQSAPRKVGDKEALAVGTTIRGSARKLNLVAQMIRGRKVEEA
                     LNILKFSPKGMAEDVRKVLASAVANAENNHNLDVDALVVAEASVGKSLSMKRFATRAR
                     GRSARIVKPFSRLRVIVREQEEA"
     gene            complement(10842..11117)
                     /gene="rpsS"
                     /locus_tag="VHN55_01240"
     CDS             complement(10842..11117)
                     /gene="rpsS"
                     /locus_tag="VHN55_01240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEX2802595.1"
                     /translation="MARSVWKGPFVELSLMKKAEAAQDKGGRAPIKTWSRRSTILPQF
                     VGLTFNVYNGRKFVPVSVNEDMVGMKLGEFAPTRTFHGHASDKKGKR"
     gene            complement(11121..11957)
                     /gene="rplB"
                     /locus_tag="VHN55_01245"
     CDS             complement(11121..11957)
                     /gene="rplB"
                     /locus_tag="VHN55_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEX2802596.1"
                     /translation="MALKQYKPTSPARRGLILVDKSALWKGKPVKALTEGKRKSGGRN
                     NKGHVTSRGIAGGHKQKYRYIDFKRRTWDVAATVERIEYDPNRSAFIALITYEGGEQA
                     YIIAPQRLAPGDKVIAGKKVDVKPGNAMEVGQMPVGTIVHNVELKPGKGGQIARAAGT
                     YVQVVGRDRGMVIVRLNSGEQRYVRSDCMATVGAVSNPDNGNQTLAKAGRTRWLGKRP
                     LTRGVAKNPVDHPHGGGEGRTSGGRHPVTPWGKPTKGARTRSNKATDKFIIRSRHAKK
                     KG"
     gene            complement(11961..12275)
                     /locus_tag="VHN55_01250"
     CDS             complement(11961..12275)
                     /locus_tag="VHN55_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEX2802597.1"
                     /translation="MAKKQQAKAEARHYDVVLSPHITEKSTMLSEHNAVVFRVASGAS
                     KPQIKEAVEALFDVTVTGVNTIVTKGKSKRWKGKPYQRSDFKKAIVTLGEGQTIDVTS
                     GI"
     gene            complement(12268..12894)
                     /gene="rplD"
                     /locus_tag="VHN55_01255"
     CDS             complement(12268..12894)
                     /gene="rplD"
                     /locus_tag="VHN55_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEX2802598.1"
                     /translation="MKVKVQSLDSGKGGDIELNDAIFGLEPRADILHRVVTWQLTNRR
                     APARAARERSEVNRTGKKFGRQKGGGTARHGDRRAPIFVGGGKAHGPRARVFVSSLNK
                     KVRALGLKMALSSKARDGNLIVVDNLDLPEGKTKALKSRLGNLGLGKSALVIDGDALN
                     VGFARASSNLESIDLMPAVGANVYDIMRHETLVLTRAAIEKLEARFNG"
     gene            complement(12894..13799)
                     /gene="rplC"
                     /locus_tag="VHN55_01260"
     CDS             complement(12894..13799)
                     /gene="rplC"
                     /locus_tag="VHN55_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010234665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEX2802599.1"
                     /translation="MRTGVIAKKVGMTRLFQADGRHVPVTVLQLDEVQVVGRREADRD
                     GYTAVQLGAGKAKAKNVAKPQRSAFGKAEVEPKAKVAEFRVADDALLDVGATLSADHF
                     VAGQLVDVCGVTQGKGFAGAMKRWGFGGLRATHGVSVSHRSHGSTGNRQDPGRVFKNK
                     KMAGHMGARNRTQQNLEVVRTDPARGLLFIKGSVPGHKGSWLTVQDAIKVPRRDDIPY
                     PAGLYEAAKAEQAAEEHAAAGLVDEGAVHEIPALPGQDEVEAIAAEQTAHVEEENAAA
                     AEGEAPAADAAEGETPAGDESKEGE"
     gene            complement(13969..>14057)
                     /gene="rpsJ"
                     /locus_tag="VHN55_01265"
                     /gene_synonym="nusE"
     CDS             complement(13969..>14057)
                     /gene="rpsJ"
                     /locus_tag="VHN55_01265"
                     /gene_synonym="nusE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406109.1"
                     /note="NusE; involved in assembly of the 30S subunit; in
                     the ribosome, this protein is involved in the binding of
                     tRNA; in Escherichia coli this protein was also found to
                     be involved in transcription antitermination; NusB/S10
                     heterodimers bind boxA sequences in the leader RNA of rrn
                     operons which is required for antitermination; binding of
                     NusB/S10 to boxA nucleates assembly of the antitermination
                     complex; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEX2802600.1"
                     /translation="IVQPTPQTVDALMKLDLAAGVDVEIKLA"
BASE COUNT         2153 a         4693 c         4463 g         2748 t
ORIGIN      
        1 ggggatgtga tcgagcacca gggccagaga atcggcgggg attagctcga agccctcgat
       61 ccggtcgctt cgcgcttcga agtcgcgaag caaggcgagc gccgccgccg gatcgcgcac
      121 cccagcccag ccgaccgcgc gcgaataaag tgccggcacc aggcgaagcg cggctgcggt
      181 gattatgccg agcgtccctt ccgcaccgac cagcaactgg tcgatgctgt agccgcgatt
      241 gtctttcttg aggccggaca ggccgttgtg gatctaaccg tcgggaagca ccgcctccag
      301 cccagcaacc agcgaacgca tggtcccgaa acggagcact tgggtgccac cggcattggt
      361 cgagacgagg ccgccgacgg tgcagcttcc gcgcgcgccc aacgtaagcg ggaacctgcg
      421 cccgaccgca gccgcctgct catgcagatc ggcgaggatc atgcccgcct cggcaattgc
      481 tgcattgtgc tcggcgctga tcgatcggag ccggttcatc cgccggagcg acaggatgag
      541 cgcggagccg tccgcaggcg gcgtcgcccc gccgaccatc gacgtgttgc cgccctgcgg
      601 gacaagcggc acgcgccggt cagcggcgag gcggacgatc gccgcgactt cctcggtcga
      661 ggcgggcgac aggattgcca gcgctcggcc atgatagcga ccgcgccagt cggtcagcca
      721 cggctcgatg tcggcggggt cggtgatcgc ggccttcgtt ccgaagcggc tgcggacctc
      781 gtcgattagc gctgattggg cgtcgctcac cttgcgctac ttggcatcgg cgccgccgca
      841 cggcaaatcg ggcgaatgag ccttcgcccc cgcatcaccc tggtcgttgc ccgctcgctg
      901 aacggagtga tcggccgtgg cgggaccctg ccgtggcaca ttcccgccga cctcaagcga
      961 ttcaaggcgg tgacgatggg aacggtcatg atcatgggcc gcaagacgtt cgagagcctg
     1021 ccggggctgc ttcccggaag gcgccacatc gtcctgacgc gtgaccgcga ctggcaagcc
     1081 gagggcgcgg aggtggcgca cagtgcggag gaagcgcttg ctcttgccgg aagcgaaccg
     1141 gtggcggtga tcggcggcgc cgacgtgttc gcgctgttcc tgccgatcgc cgaccgggtc
     1201 gagctgaccg aggtcgttga cgacatcgaa ggggacacgg tgatgccgga tcctcgaaag
     1261 caggccgact gggccgagac ggaggtggag gtccacgccc cggacaatgg gcgcccgggc
     1321 tttcgtttcg tgacgctcga tcgcgcctag cgctggtcgg gttccggcga ggcgaagtcg
     1381 cggtaggcgt ccaactggcc ggaaagcacc tggtcgacaa gcggcgccag cttatcggcg
     1441 tttccggcag cgaaccccga agccttatac gtcatggtga ctctcgatcc gcccgggatc
     1501 ttgtcgacct tcacatccat cactgccgca accgcttcgt agagcaacgg ccctagcgca
     1561 ccggtgagca cggcacgttt gccggggtcg acataggtga cccgcaaatg ctcgatgccc
     1621 ccgccgttgg gaagggcttc gcagaaacag ccgcccggca agagcttcag gctgaggttt
     1681 gccgatttgc cgctgtaggt gtgatcggcc ccccaccagc tctggacctg tccaaaggcg
     1741 gcgaacgctt ctgcgggaag cagcggcacc tcgaccgaat gccgaagctc gaacccgttc
     1801 gccgaggccg tgaccacttc ggcagccgcc ggtgccggca cggcaagcag caaaagcgcg
     1861 attgcaaatt tcataaacac ccccaggcgg ggagcatgca gcagctattc cagcccgtcc
     1921 agaatggcgt cgatggcggc tgcgacatcg tcgacgggcg ccatcccctc cacccgccgg
     1981 actaggccac gctcctcgta atagggcagg atcggcgccg tctttgcgcg atattcggcg
     2041 agccgggtcc ggaccgtctc ttcattgtcg tccggccggc gcttgaaatc gtggcttccg
     2101 caaacgtcgc aagtgtcctc ggtcttcggg agtttgtacc gatcgtgata gggcgcgccg
     2161 catttggcgc agctgaaccg gccggtgatc cgctcgacga gcgcctcttc gtccacgtcc
     2221 agctcgatca ccccatcgag ctttcggccg cggtctgcaa gcaacaggtc gagcgcttcg
     2281 gcctgcgcgc gagtccgcgg atagccgtcg aagatggcgc ccttgtcgcc gatcgagtcg
     2341 agccgctccc cgatcaaagc gctgacgatt gcatcgctga ccagctcgcc ggcttccatc
     2401 accgccttcg ccttcagtcc caccggagtc cccttcgcga ccgccgcacg gagcatctcg
     2461 ccggtcgaaa gctggaccat tccgcggttg ctctcaagcc gcgccgcctg ggtgcccttg
     2521 ccggccccgg gagggccgag gaggatgatg ttcatttgcc ggtgccccac tgtcggcggc
     2581 taccgtcggc gcccgctctt gagcttcgcc ttcttgatga gattgccata ttcgtgggca
     2641 atcagatggc tctggatctg ggtcaccgtg tccatcgtga cgttgacgac gatcaacagg
     2701 ctggtgccgc cgagatagaa gggcaccccc gcctgtgcga acaggaactc tgggacgagg
     2761 cagatcagcg ccaaatagat cgaccccacg accgtcaccc gggtcagcaa ataatcgaaa
     2821 taatgctcgg tcgccttgcc gggacggatc ccggggatga acccgccgtg cttcttcagg
     2881 ttctcggccg tttcctcgct gttgaactgc accgcggtgt agaagaaggt gaagaagatg
     2941 atgccggcgc cgtagatcag catgtacagc gggctgccgt gctgaaggta ggtgctgatg
     3001 gtgatcagcc aatcgctggt gctggtgccg gactgagcgc tggagcccat ccactggatg
     3061 actgtcagcg gcatcagcag cagcgacgaa gcgaaaatcg gcgggatcac accggcggtg
     3121 ttgatcttga tcggcaggtg cgagcgctcc tgctgcatcg cgccgcgtgc tgtctgccgc
     3181 ttcggatact ggaccaggac ccggcgctgc gcccgctcca cgaagcagat gaaggcgacg
     3241 aggcccagag tcaggaaaat gatcagggca acgaggagcg ggtccatcgt gcccgttcgg
     3301 ccgccctcga acagctgcgc gaccgattgc ggaaggtggg cgacgatccc cgccatgatg
     3361 atcagcgata tgccgttgcc gatgccgcgg ctggtaatct gctcgcccag ccacatcagg
     3421 aacaaggtgc cgccgacgag gctgatcgtc ccggccgcct cgaacaccag tcccggctcg
     3481 acgacagcct ggatgccctg ccggaccgat tgcgattcaa gcccgcgaac gaccatgtag
     3541 ccctggacca ggaccagcag cacggtcagg taacgagtgt attggttaag cttcttgcgc
     3601 ccggcttccc cttccttgcg gagggcctgc caaggtccgt acatcgtcgc tccgagctga
     3661 acgacgatcg acgcggtgat gtagggcatc acgccaagcg cgatgacgct catcctctcg
     3721 agcgcaccgc cggaaaaggt gttgaagata tcgaggacgc cgccgctctg agtgtcgaac
     3781 agcgcctgca tcgcggccgg gtcgacgcct ggaatcggaa cgtacgacat gaagcggaag
     3841 aggacgagcg cgccgagcgt aaaccacagg cgcttcttga gctcggtcgc cttggagaag
     3901 ttcgcaaggc tgatgctgga agcgagttgc tcggctgcgg atgccattta cctgaattcc
     3961 cctaaactct gcggcccata taggccgccc tgccgccatt gcgagcgtgg caaagcaatc
     4021 cagtcatgtg ccgctggatt gccaggtggc ctacactctg tgcaatgacg ttcaggcctc
     4081 ggccttggct gccttgtcag cgagacgagc gtcgcgcgcc ttgcctttct tcgcagcagc
     4141 cagctcggcc ggattcttcg cctcgatgat ctcgacggaa cccccggcct tctcgaccgc
     4201 ctcgcgggcg cccttggaga tgccggcgac gcggacgctg agctttgcct tcagctcgcc
     4261 cttgccgagc agccggacgc cgtcgcggcc gccacgagcc aggcctgccc ccttgagcgc
     4321 gtcatggtcg agcgtgccct tcgagtcgag cttgccggag tcgatcgcct tctggacggc
     4381 gccgatgttc acctcggcat agtcgcgcgc gaacgggtta ttgaagccac gcttcgggag
     4441 ccgcatgtgg agcggcatct ggccgccctc gaagccccag atcgacacgc ccgagcggct
     4501 cttctggccc ttctggccgc gcccggcggt cttgcccttg cccgagccga ttccgcgtcc
     4561 gacgcgcatg cggcccttgc gggcgccctc gttgtcacga atttcgttca gtttcatgtc
     4621 tttgcactcg ctttcgcttt tttcgcgctg cgcccctacg ggcgcgggtg gttaggcgcc
     4681 ttcaacggct accagatgct ggaccttgcg gacctgtccg cgaacgtccg gcgtgtcttc
     4741 cacctcgacg gtccggccca tcttgttgag gccgagcccg acgagggtcg cgcgctgagt
     4801 cttgtcgcga cggatgggcg aacccgtctg ggtgatcttg atcttcgcca tcactcttac
     4861 tccgtgatcg cttcggcctg ggcttccgcc tcggccgtgc ttgcaccgcc gcggccgagc
     4921 aggtcggcga ccttcttgcc gcgacgctgg gcaaccgagc gcgggctcgt ctgctccttg
     4981 agcgcttcga aggtggcgcg gatcatgttg tacgggttcg acgtgccgac cgacttggtg
     5041 acgacgtcgg caacgccgag gctctcgaag atcgcgcgca tcgggccgcc agcgatgatt
     5101 ccggttccgg ccggggcagt gcggatcgtc actcgaccgg cgccgaagtg gccgagaccg
     5161 tcgtgatgca gagtccggcc gtcgcgcagc gggacccgga tcatcgcctt cttggctgcc
     5221 gcggtcgcct tgctgatcgc ttcgggaacc tcgcgggcct tgccatggcc gaagcctgcg
     5281 cggcccttgc cgtcgccgac tatgaccagc gccgcaaagc cgaagcgctt gccgccctta
     5341 acggtcttgg aaacgcggtt gatgtggacg agcttctcga tcagctcctc gcccccgtcg
     5401 tcgccgccgc gcccaccgcg ccggtcgtca cgacggccac ggccgccacg atcgccgccg
     5461 ccacggccac gtccgccgcc cggtccgccg cgtccgccgc ctcccgggcc acgtccgcca
     5521 cgaccgccgc gcggacgctc ttgctcctgc ggcggctcgt gcggagccgg ctcggcggaa
     5581 ccttcggtct cgacgaccgc gtcctcctta gcggggacct caacctgcgc ctcttcgacg
     5641 ccgtccttgg tcacttccgg ggtttcgttc tcttgcacca tctaaaactc caatccgcct
     5701 tcgcgagcgg catcggccag cgccttgacg cggccatgga acaggaagcc gccacggtcg
     5761 aatacgaccg acgaaacgcc cgccttcttc gctcgctcgg cgatcgcctt gccgacggcc
     5821 gcggcgccct cgcgggtcgc gttggccttg cccttcagct ccttgtcgag agtcgaagcg
     5881 gcggccaccg tcctgccggc ggaatcgtcg atcacctggg catagatgtg cctgcccgag
     5941 cggtgcaccg acagacgcgg cttgcccgac gagacggcgc gaagggcgct tcgcacccgc
     6001 tggcgacgtc gatcgaagag agagagtttc gccatggcta tttcttcttg ccttctttgc
     6061 ggaagatata ctcgccgcgg tacttgatgc ccttgccctt gtaaggctcc ggcttgcgcc
     6121 agcggcggat ctcggccgcg acctggccca ccttctgctt gtcgatgccg ctgatctcga
     6181 ccgtgttctg gtcgggagtc ttgacctcga cgccctcggg cacagagaag ttgacgtcgt
     6241 ggctgtagcc gagctgaaga cgcaggttct tgccctgagc ctgagcgcga tagccgacgc
     6301 cgctgatctc gagggtcttc gaaaagccct cggtgacccc ggtgacgagg ttctggacca
     6361 gcgtccgctg cattccccag aaggcacgcg cctccttgga gtcgttggcg ggaacgacgc
     6421 tgatcccgtc ttcggagatg tcgtagcgga tttcgtcacg catctgcagc tgaagcgtac
     6481 ccttggggcc cttcacgcta agcgtacggt cctcggtgct ggcgctaacg ccagccggga
     6541 gcgcaaccgc ccttttcccg atcctgctca tcagaacacc tccgcgagca cttcgccgcc
     6601 gacattctgt tcgcgcgctt cggcatcgga gaggacgccg cgcggggtcg acacgatcac
     6661 gacgcctagg ccgttgcgga ttcgcggcag gtccttggcg cccgaataga cccggcggcc
     6721 cggcttcgaa acgcgtgcca ggtgctggat cgcgggctgg ccctcgaaat atttcagctc
     6781 gatccgaagg ccctgctgcc cagcgatcgc ttcctcgctg tagccgcgga tatagccttc
     6841 gcgctgaagc acatcgagca cataggcgcg aagcttcgac gccggcgtca ggacagagtc
     6901 cttgcgcgcc tgctggccgt tgcggattcg cgtgagcaga tcgctcaggg gatcattcat
     6961 cgccatactc gatcctccta ccagctcgac ttgatgacgc ccgggatcag gcccttgttg
     7021 gccagctccc tgagcatgat ccgcgacagg cggaacttgc gataataggc ccggctgcgg
     7081 ccggtcagct cgcagcggtt gcggattcgg gtcgggttac cgttgcgcgg gatctcggcc
     7141 atcttcaggc gcgcgatcag gcgctcggtc tcgtcgcgtg actcgtcgtt cgcgatagcc
     7201 ttgagcttct cgtacttcga cgcgtacttc tcgacgagct tccttcgacg ctcgttcttg
     7261 ttgatcgaac tcagtttcgc catgacttaa gttcttctcc tagaagcaga ccgctcaagc
     7321 ggcctgcttt tcctctgctt ccgcggggaa cgggaagttg aacaggcgca gcagctcgcg
     7381 cgcctcctcg tccgtcttcg cggtggtggt tacaatgacg tccatgcccc ggaccttgtc
     7441 gatgtcgtcg taattgatct cgggaaagac aatctgctct ttgaggccca tcgcgtaatt
     7501 ccctcggccg tcgaacgact tcgggttcag gccgcgaaag tcgcggactc gcggaagcgc
     7561 gatggtgacc agccggtcca gaaactcgta catgcgctcg cggcgaaggg tgaccttgca
     7621 tccgatcggc atgccttcgc gcagcttgaa ctgggcgatc gacttcttgg ccttggcgat
     7681 caccggcttc tggccggcaa ttgcctccat ctcggaagcc gccttctcga cgagcttctt
     7741 gtcgttcgtg ccctcgccga cgcccatgtt gatgacgatc ttctcgagcc gaggaacctc
     7801 gaagcggctc ttgtagccga acttcgcgat catcgccttg acgatacgct cgtcatagtc
     7861 cgcccttagg cgcggggtgt aggacttgcc ggccggcttt gcgggcttgg cggctttctt
     7921 ctcagccacc tcggcctcct cgaccttggt ttcgttgtca gccattgatc agctctcccg
     7981 acttggccgc gacccggact ttcttgccgt cgcgctcctc gaagcggacc cgggtcggct
     8041 cgccgctctt gggatcggcg atcgcgacgt tggagatgtg cagcggcgct tccttgcgct
     8101 cgatcccgcc ctgcgggttc agctgcgtcg gcttgcgatg gcgggcgtgg acattcactc
     8161 ccgaaacgag gacccggtcc tccttcggaa tgatcttcgt cacctcgccg gtcttgccct
     8221 tgtccttacc ggcaaggatc acaaccgtgt cgcccttctt tattttctgg gccattacag
     8281 aacctccggc gccaggctga tgatcttcat gtgcttcttc gcccgaagct cgcggacgac
     8341 cgggccgaaa atgcgggttc cgatcggctc gtcagccttg ttgacgagaa ccgcggcgtt
     8401 cgaatcgaag cggatcaccg aaccgtcggg acggcggatg tccttggcgg tgcggacgat
     8461 caccgcacgg tgaacgtcgc ccttcttcac tcggccgcgc ggcgccgctt ccttgacgga
     8521 aacgacgatg atgtcgccga ctccggctac ccggcgcttg gagccgccca gcaccttgat
     8581 gcactggacg cgcttcgcgc cgctgttgtc cgcgacgtcc aggtttgact gcatctggat
     8641 cattgttcga ccctatcctc tttcaaaaat cgctcaggcc tcggcgtcgg cttcagcgac
     8701 gtcctcggca tttgccttgc ccttgccctt cgaggccttg gccggcttct tctcggtctt
     8761 ctccggctcc accgcttcct ccgccggagg ggcgacgacg tcgggttcgt cgatgtcgat
     8821 cacggccgcc ttggcagcgc cgatccgctc gatcaccgtc caggtcttgg acttggagat
     8881 cggcttgcat tcctcgatcc gcacctgctc gcccatcttg aatgcgttgt cggcatcgtg
     8941 agcgtggtac ttcttcgaac ggcggatgat cttcccgtac agcgggtgct tcacccggcg
     9001 gtcgacccgg acagtgacgg tcttgtcacc cttgtccgag acaatcgttc cgatcaggac
     9061 gcgctttggc atctgaattc ctctccttac gccttcgcgg cctgctggcc ggcgcgctga
     9121 ttctgaagcg tcttgattcg cgcgatggtc ctgcggacct ccgtcactcg cgaaggcttc
     9181 tcgagctggt tggtcgccga ctggaaacgc aggttgaact gctcgcgctt tagctcgagc
     9241 agctgctgct gcagctggtc gtcggtcttg accttgagat cgtcgatcgc ggccacttta
     9301 acgttcctcc tcgaccagct tctcgcccag gcgggcgacg accttggtct tgatcggcag
     9361 tttctcggcg gcgcgctcga acgccgtctt cgcaagcggc cccggaattc cgtcgagctc
     9421 gaacaggatc cggccgggct tgacccgggc gacccagaac tcggggctgc ccttgcccga
     9481 gcccatccgg acttcggcgg gcttcgaact taccggcacg tccgggaaca cgcggatcca
     9541 aaggcggccg gcgcgcttga tgtggcgctg gatcgcgcgg cgggccgcct cgatctggcg
     9601 cgcggtgatc cgctccggct ccatggcttt cagcccgaag gcgccgaagt tgagctcggt
     9661 tccgcccttg gcgttgccat ggatccggcc cttgaaggcc ttgcggaatt tggtgcgctt
     9721 tggttgcagc atctcttttt accccagggc ctagcggcgg cgatcgtcgc gggccgggcg
     9781 gactccggac gtctgcgcgt ccatcatcag ccggtcctgg gcggtcgggt cgtgacccag
     9841 aatctcgccc ttgaagatcc agactttgac tccgcaggcg ccgtaggcgg tgtgcgcctc
     9901 ggcttcggcg taatcgacgt tgccccgaag cgtgtgcagc ggaacccggc cctcgcggta
     9961 ccattcggtg cgtgcgatct cggcgccgcc gagacggccg gcgcaggtga tccggatccc
    10021 ttccgcgccc aggcggaggg ccgactggac cgcgcgcttc atcgcccgtc ggaacgcgat
    10081 ccggcgctcg agctggtcgg cgactccctg ggcgacgagc ttggcgtcga cctcgggctt
    10141 gcggatttcg acgatgttga ggctgacgtc gctggacgtc atcgactgaa gagtcttgcg
    10201 aagcttctcg atgtcgacac ccttcttgcc gatgatgact cccgggcgag ccgcgtagat
    10261 cgagatccgg cagatcttcg ccgggcgctc gatcacgacc tttgagatcg cggcctgcgg
    10321 aagcaggtcg aggatgtatc ggcggatctt gaggtcctcg agcagaagcc ggccgtaatc
    10381 ctggccttcc gcgaaccagc ggctgtccca ggtccggttg atctgcaggc gaagcccgac
    10441 aggtgaggtt ttctggccca tatcttacgc ttcttcctgc tcgcgaacga tgacccgaag
    10501 gcggctgaac ggcttgacga tgcgcgccga gcgaccgcgg gcgcgggtgg caaagcgctt
    10561 catcgacagc gacttgccga cgctcgcttc ggcgacgacc agagcgtcga cgtcgagatt
    10621 atggttgttc tccgcattgg cgaccgccga ggcgagcacc ttgcggacat cctcggccat
    10681 tcccttgggc gagaacttaa ggatgttgag cgcctcctcg accttgcggc cgcggatcat
    10741 ctgagcgacg aggttcagct tccgggccga accgcggatc gtggttccga ccgcgagcgc
    10801 ttccttgtcg ccgaccttgc ggggtgcgga ttgcttgccc atcagcgctt gcccttcttg
    10861 tcggacgcat ggccgtggaa ggtgcgcgtc ggagcgaact cgccgagctt catgccgacc
    10921 atgtcctcgt tgaccgacac cggcacgaac ttgcggccgt tgtagacatt gaaggtgagg
    10981 ccgacgaact gcggcaggat cgtcgagcgg cgcgaccagg tcttgatcgg cgctcggcca
    11041 cccttgtcct gcgcggcttc cgctttcttc ataagcgaaa gctcgacgaa cgggcctttc
    11101 cagacggaac gggccattgc ttaacccttc ttcttcgcgt gacgcgaccg gatgatgaac
    11161 ttgtcggtcg ctttgttgct acgagtgcgg gcacccttgg tcggcttgcc ccacggggta
    11221 accggatgac ggccgccgga ggtccggcct tcaccaccgc catgcgggtg gtcgaccggg
    11281 ttcttggcga cgccgcgggt cagcggccgc ttgccgagcc agcgggtacg gcccgccttg
    11341 gccagcgtct ggttgccgtt gtccgggttc gacacggcgc caaccgtcgc catgcagtcg
    11401 gagcggacat agcgctgctc gcctgaattg agcctgacga tgaccattcc gcggtcacgg
    11461 ccgacgacct gcacataggt gccggctgcg cgcgcgatct gcccgccctt gcccggcttg
    11521 agctcgacat tgtggacgat ggttccgacc ggcatctggc ccacttccat cgcattgccg
    11581 ggcttcacgt cgaccttctt gccggcgata accttgtcgc ccggagcgag acgctgcggg
    11641 gcgatgatgt aggcctgctc gccgccttca taggtgatga gcgcgatgaa ggccgaccgg
    11701 ttagggtcgt actcgatccg ctcgacggtc gccgcaacgt cccaggtccg ccgcttgaag
    11761 tcgatgtaac gatacttctg cttgtggccg ccggcgattc cgcgcgaggt cacgtggccc
    11821 ttgttgttgc ggccgccgct cttgcgcttg ccttcggtga gcgccttgac gggcttgccc
    11881 ttccacagcg ccgacttgtc gacgaggatg aggccgcggc gcgccgggct ggtcggctta
    11941 tattgtttga gtgccatggc ttagatcccg ctcgtcacgt cgatggtctg gccctcgccg
    12001 agggtgacga tcgctttctt gaaatcggac cgctggtagg gcttgccctt ccagcgcttg
    12061 ctcttgccct tggtgacgat cgtgttgacg ccggtcaccg tgacgtcgaa caaagcctcg
    12121 acggcttcct tgatctgcgg cttcgacgcg cccgatgcga cccggaacac gaccgcatta
    12181 tgctcggaaa gcatggtcga tttctcggtg atgtgcgggc tgaggacgac gtcgtagtga
    12241 cgtgcttcag ccttggcctg ctgcttctta gccattgaac cgagcctcca gcttttcgat
    12301 cgcggcgcgg gtcaggacca gcgtctcgtg gcgcatgatg tcgtaaacat tggctccgac
    12361 cgccggcatc aggtcgatgc tctcgaggtt cgaagacgcc cgcgcgaaac cgacgttgag
    12421 cgcatcgccg tcgatcacca gcgccgactt gccaaggccg agattgccga ggcggctctt
    12481 gagcgccttc gtcttgccct ccggcaggtc gaggttgtcg acgacgatca ggttaccgtc
    12541 gcgagccttg gacgacagcg ccatcttcag gccgagcgcg cggaccttct tgttgaggct
    12601 cgacacgaaa acccgggcgc gggggccgtg ggccttgccg ccgccgacga aaatcggggc
    12661 ccggcgatcg ccgtggcgag ccgttccgcc gcccttctgg cgaccgaact tcttgccggt
    12721 gcggttgacc tcgcttcgct cgcgagccgc ccgcgcgggt gcgcggcggt tggtgagctg
    12781 ccacgtcacg acccggtgaa ggatgtcggc gcgcggctcc aacccaaaaa tcgcgtcgtt
    12841 gagctcgatg tccccgccct tgccggagtc gaggctctgg accttgacct tcatcactcg
    12901 ccttccttgc tttcgtcgcc tgccggggtc tcgccctcgg cggcgtcagc ggctggagcc
    12961 tcgccctcgg cggcggctgc attctcttct tcgacgtggg cggtctgctc ggcggcgatc
    13021 gcttccactt cgtcctggcc cggaagcgcc ggaatctcgt gcacggcgcc ctcgtcgacc
    13081 agtccggcag cggcatgctc ctcggctgcc tgttccgcct tcgcggcttc gtagaggccg
    13141 gccgggtagg gaatgtcgtc gcggcgcggg accttgatcg cgtcctgcac cgtcagccag
    13201 ctgcccttgt gtccgggcac cgagcccttg atgaacaaaa ggccgcgcgc cggatcggtg
    13261 cgcacgacct cgagattctg ctgggtgcgg ttacgcgcgc ccatgtgccc ggccattttc
    13321 ttgttcttga agacgcggcc gggatcctgg cggttgccgg tcgaaccgtg cgagcggtgt
    13381 gagacggaaa cgccgtgggt ggcgcgaagg ccgccgaatc cccagcgctt catcgctccg
    13441 gcaaagccct tgccctgagt cacgccgcag acgtcgacca gctgcccggc gacgaaatga
    13501 tcggcgctga gcgtagctcc gacatcgaga agcgcgtcgt cggcgacacg aaactcggcg
    13561 actttcgcct tgggctcgac ctcggccttg ccgaaagccg aacgctgcgg cttcgccacg
    13621 ttcttcgcct tcgccttgcc ggcgccgagc tggacggcgg tatagccgtc acggtccgcc
    13681 tcgcggcggc ccacgacctg cacttcgtcc agctgaagga cggttacggg cacatgccgg
    13741 ccgtccgcct ggaacaggcg ggtcattcct actttcttcg cgatcacgcc ggtgcgcacg
    13801 accagttgct cctacacaga ggcacgtggg gacgatcccc aagtgcttgc agcccatcca
    13861 aattttccgc gtgccccgcc tgggctaatg ctccttaaag aggagcggcg gggacgcagc
    13921 cggagccaat ggctccgcgg tatcctccgt ctgtgactcc aaaccggctc aggccagctt
    13981 gatctccacg tcgacgcccg cggcaaggtc cagcttcatc agagcgtcga ccgtttgcgg
    14041 ggtcggctgc acgatat
//
LOCUS       DATAKH010000035        11471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_19934,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000035 DATAKH010000000
VERSION     DATAKH010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11471
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19934"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VHN55_01270"
     CDS             <1..304
                     /locus_tag="VHN55_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2802601.1"
                     /translation="CELAFLGLVPELTGRGHGRWLLGETLRLAWRDGVRRVHVHTCTL
                     DHPAALPAYESAGFVPYKRAVERFPDPRLTGILPRDAAPQVPLLGTETPAVSPPES"
     gene            complement(250..1071)
                     /locus_tag="VHN55_01275"
     CDS             complement(250..1071)
                     /locus_tag="VHN55_01275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802602.1"
                     /translation="MAALSISKAWEETKSRIAVDGKLMITVAAALILLPQAIVTLMAP
                     PEMLSGESPPGWLNLAVFAAAMVGLVGQLAIIRLALGPATSVGEAVSHGARRFLPALV
                     ALLLLALAIAVLAIPLVMLFAGSEGLEAAASGAPSPMVATAALILVVLGVLLGARLLM
                     VMPVAAAEEGGPIHVLRRSWSLAGGHYFKLVAFVLLILVAVLAISLAVQLGGGSVIAL
                     IFDVRPFSPGALLYGLLFGAAQAVYGVGISVLLARIYLQLSGGETAGVSVPKSGT"
     gene            1163..1807
                     /gene="lipB"
                     /locus_tag="VHN55_01280"
     CDS             1163..1807
                     /gene="lipB"
                     /locus_tag="VHN55_01280"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019832197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEX2802603.1"
                     /translation="MESINGVEWRTSEGLVPYYEALAFMEQRAAAIRSGEAGECVWLL
                     EHPPLFTAGTSADPAELINPLDFPVHEAGRGGRYTYHGPGQRVGYVMLDLDKRGRDVR
                     RLVHSLEGWIIATLAELGVESHRAPGRIGIWVGSGSEEAKIAALGIRVKRWVTLHGFS
                     INVDPDLSHFGGIVPCGISEFGVTSLAKQGKESSMSGVDAALRGSFHRFLNDLG"
     gene            1910..2143
                     /locus_tag="VHN55_01285"
     CDS             1910..2143
                     /locus_tag="VHN55_01285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802604.1"
                     /translation="MRALILVAGAALAVAACSNNAADDNMAVDNLTAENLVIENDMTT
                     DMNAVDMNATTDMNTVDMNAVDTNTTTDTTTNM"
     gene            2243..2500
                     /locus_tag="VHN55_01290"
     CDS             2243..2500
                     /locus_tag="VHN55_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802605.1"
                     /translation="MRLVLSLGALALASCGGNAPTNNSAVTEESDATEVTAVNDVTAI
                     DAATGEAADMAADVNYTFNEEAANDSSAAAENSTNDSASDR"
     gene            complement(2497..3129)
                     /gene="queE"
                     /locus_tag="VHN55_01295"
     CDS             complement(2497..3129)
                     /gene="queE"
                     /locus_tag="VHN55_01295"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020820148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase"
                     /protein_id="HEX2802606.1"
                     /translation="MTYAVKEMFLTLQGEGVQAGSRAVFLRFAGCNLWSGREQDRASA
                     QCNFCDTDFVGTDGPGGGKFKSADALAGAVEEEWGEGSENRLVVITGGEPMLQLDTDL
                     IGALHERGFRVAIETNGTLPVAAGLDWVCVSPKAGTEVVQKSGNELKLVWPQSGIDPV
                     ELESWDFDHFLVQPMDCAEGDRAVEAAIALAMERPRWRLTLQAHKVVGLA"
     gene            complement(3126..3809)
                     /gene="queC"
                     /locus_tag="VHN55_01300"
     CDS             complement(3126..3809)
                     /gene="queC"
                     /locus_tag="VHN55_01300"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEX2802607.1"
                     /translation="MAKAVVLLSGGLDSMVTAAIARERGYSLLALTVQYGQRHSIELE
                     AAANIARSLGAERHIVLPLDLRQFGGSALTDDIAVPKSGPGDDIPVTYVPARNIIFLS
                     LCLGLAEAAGARDLFIGVNAIDYSGYPDCRPDFIRAFEAMANLGTKAGIEGEGFEVHT
                     PLIDLSKADIVREASRLGLDAAMSWSCYDPTSELEHCGLCDSCRLRAGGFAEAGLPDP
                     TRYAERPEQ"
     gene            complement(3809..4159)
                     /locus_tag="VHN55_01305"
     CDS             complement(3809..4159)
                     /locus_tag="VHN55_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HEX2802608.1"
                     /translation="MLYLVIKAAISGLIVAVASEVARRYPGWGGLIVSLPLTSLLAMI
                     WLWRDTGDPERIAGLSIGAFWFILPSLPMFAVLPLLLRTGLGFWAALALALAGTLALY
                     AVMFWAAPRLGLKL"
     gene            complement(4311..4694)
                     /locus_tag="VHN55_01310"
     CDS             complement(4311..4694)
                     /locus_tag="VHN55_01310"
                     /inference="COORDINATES: protein motif:HMM:NF023696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 family protein"
                     /protein_id="HEX2802609.1"
                     /translation="MKRLARFAGVVGAGAALAAAGPSALSRAEGGLWEIARGKSDPVQ
                     VCIANPAMFAQFEHRKAKCSRSVIRDDGTRATVHYTCAGGGFGQSDVTMLTPRSLRVE
                     TQGISDGAPFKYKLQAHRVGDCPAH"
     gene            complement(4736..5638)
                     /locus_tag="VHN55_01315"
     CDS             complement(4736..5638)
                     /locus_tag="VHN55_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010164667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEX2802610.1"
                     /translation="MPTIELNTDVALGVTIPARNARGRFARIGPVLDSILANHGYPPV
                     IERLLAEALTLTALLGAMLKEPEGQVTLQAQTENGAVDLLVCDYLGGELRGYVKHDPA
                     RLAEAGPNPSLFALFGKGYLAITFDHPGVDERYQGIVPLEGDSLAHAAESFFAQSEQI
                     PSIVRLAAEKRDEGWSAGGLLFQHLPEGEEGRDRLHTRLDHPDWPHVAILAGSVKAEE
                     LTDPGLTLDDLTWRLFHDEAEVRTMEPLPLRKGCRCDPQYVRSVIARFPAEERAAMVG
                     EDGMIRVDCAFCSTSFPIALEDVS"
     gene            5932..6183
                     /locus_tag="VHN55_01320"
     CDS             5932..6183
                     /locus_tag="VHN55_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802611.1"
                     /translation="MNMEYGEAISASAKARALEIARFKLSAGGTDIRKIATEAVSEAY
                     CVCVVEGEDAAEGQLSPIHGNLIDDIEARLSQFVAQECC"
     gene            6183..6503
                     /locus_tag="VHN55_01325"
     CDS             6183..6503
                     /locus_tag="VHN55_01325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HEX2802612.1"
                     /translation="MALHHLGPGEPAHLPSRLADGNGRAVALVKTDRFEAAQLVLAAG
                     ESIARHSVPGYATIQCLNGTVLLETDETIELKSGDWLYLDRAQEHSVQAVDDSSLLLT
                     ILFE"
     gene            complement(6540..7730)
                     /locus_tag="VHN55_01330"
     CDS             complement(6540..7730)
                     /locus_tag="VHN55_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012817334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX2802613.1"
                     /translation="MAITPLMPVYARCEVRPVKGEGVYLYGENGEKYLDFASGIAVNL
                     LGHGHPHLTKAIQEQAAKLMHVSNLYGSPQGEAFAKRLCDLTFADTVFFTNSGAEAVE
                     CAIKTARRYHHAKGNPEKHDLITFSNAFHGRTMATISATNQEKLRDGFAPLLPGFKVV
                     EFDNLDAALNAVDGNTAGFLLEPVQGEGGIRPASKAFMQGLREFADVNDLMLVLDEVQ
                     CGMGRTGTLFAHEQYDIRPDIMASAKGIGGGFPLGACLATERAASGMVIGTHGSTYGG
                     NPLAMAAGQAVLDVVANEEFLAHVRQTGERLRSALEQMIPNHDELFDSVRGMGLMLGI
                     KMKTDSRAFVNWLRGRGLLTVAAGDNVMRVLPPLVIEEEHIREFVDRLSAAAAKYEVP
                     AEAA"
     gene            complement(7852..8286)
                     /locus_tag="VHN55_01335"
     CDS             complement(7852..8286)
                     /locus_tag="VHN55_01335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802614.1"
                     /translation="MRTILISLAAAASALVVAAPASAQAWSISVQSHGNLGPAYGAPA
                     YGAPYGYAYGYNQGAHQWARQLQQVRMQMHALDRAGRLTRAEERDLRRDINSAERALR
                     NVSRRGVSAYEARVMNQRIARLHYELRRYSDRDYRRGYGYRR"
     gene            8548..9312
                     /locus_tag="VHN55_01340"
     CDS             8548..9312
                     /locus_tag="VHN55_01340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802615.1"
                     /translation="MLTFLRTAALAATVLLVPAASAGVVTASVASQAVTTPAPKIVPA
                     VAPAAPKPPAFEAAMGLEPAHDHGSGLAPGQTAQDFRDWIRRSPANRASLAGFRAHLA
                     AKGVDSVIPLWQLVRTSSSWKGCGAEPFEAPPADKWDHIVKTLQFVRDNVEPAVGEVE
                     ALSAYRNAGLNACSNGAPKSAHREFFALDLTPVNAAVARADMIRSVCSAHARNGRAYD
                     TGLGFYSGRRFHVDSSGFRKWGSNGKGATSPCVSRA"
     gene            complement(10173..10967)
                     /locus_tag="VHN55_01345"
     CDS             complement(10173..10967)
                     /locus_tag="VHN55_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2802616.1"
                     /translation="MPGEPVLSGVNWGGLKTLYIKEVRRFFKVQLQTVWGPALTTLLY
                     LAIFTIALGRGGRTVMGVHFADFLAPGLIVMAMLQNAFANASFSLLVGKIQGNIVDYL
                     MPPLSTGELMAGLVGAAVTRAFFVGFAVWLAMALWPGVSVSVAHPLAAFWFALMAALM
                     LSFLGLITSLWAEKFDHAAAVTNFIIAPLSLLSGTFYSVDALAPAFQAISHANPFFYV
                     ISGFRYGFLGVSDSPILVGAAGLLVLNVALWGTCYGLLRSGWKIKA"
     gene            11092..>11471
                     /locus_tag="VHN55_01350"
     CDS             11092..>11471
                     /locus_tag="VHN55_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HEX2802617.1"
                     /translation="MSWTEERIEQLKQMWHDGATASEIADKLGGVSRNAVIGKAHRLG
                     LEARPSPVKPGEEKEPAPAKTAKKAQPAPAHKPAAAKPKADPAPPIPGSEPARQQRTG
                     GDQMQYRSVGPGGFIRQGPGDQQAP"
BASE COUNT         2154 a         3744 c         3635 g         1938 t
ORIGIN      
        1 gtgtgagctg gcgttcctcg ggctggttcc ggaattgacg ggccggggcc acggccgctg
       61 gctgctcggc gaaacgcttc gcctggcctg gcgcgacgga gtccggcgcg tgcatgtcca
      121 cacctgcacg ctcgatcatc cggcggcgct cccggcctat gaaagcgccg gattcgtgcc
      181 ctacaagcga gccgtcgagc gctttcccga tccgcggctc actggaatcc tcccccgcga
      241 cgccgctcct caggtaccgc ttttggggac tgaaacgccc gccgtttcgc caccggaaag
      301 ctgaaggtag atccgcgcca gaagcacgga gatgcccacc ccataaactg cctgcgcggc
      361 accgaagagc agcccataga gcagtgcgcc ggggctgaac gggcggacat caaagatcag
      421 cgcgatgacc gagccgccgc ctagctgcac cgcaagggag atggcgagca cggccaccag
      481 gatcagcaac acgaacgcga cgagcttgaa ataatgcccg ccggcaagag accagctccg
      541 ccgcaggacg tggatcgggc cgccttcttc ggctgcggcg accggcatta ccatcagcaa
      601 cctggctcca agcaggactc caaggacgac aagaatcagc gcggcagtgg cgaccatcgg
      661 cgagggcgca cccgatgcag ctgcctcaag cccttcggag ccggcaaaca gcatgacgag
      721 agggatagcg agaactgcga tcgccaatgc gagcagaagc agggcgacaa gcgccggaag
      781 gaaacgcctg gcgccgtggg acaccgcctc gccgacgctc gtggcgggac cgagtgcaag
      841 ccggattatt gccagctggc cgacaagccc gaccattgcc gccgcgaaaa cggccaggtt
      901 cagccatccg ggcgggctct cgcccgacag catttcgggt ggggccatca gcgtgacgat
      961 tgcctgcggc aggagaatca gggcggcagc caccgtgatc atcagcttgc cgtccacggc
     1021 aatcctggat ttcgtttctt cccaggcctt cgaaatcgaa agtgcagcca tccggtcccc
     1081 ctgtgctctc cggcctttat gcggggcttg cggcaggcat gcaatcttgc ccgcgggcgc
     1141 ttgccacgcc atctgcctgc gcatggaatc gatcaacggc gtcgagtggc ggacgagcga
     1201 agggctcgtg ccgtattacg aggcgctcgc cttcatggag cagcgtgcag cggcgattcg
     1261 ctccggcgag gccggcgaat gcgtctggct gctggagcat cctccgctgt tcacggcggg
     1321 caccagcgcc gatccggccg agctgatcaa cccgcttgac tttcctgtcc acgaagccgg
     1381 gcgcgggggg cggtacacct atcacgggcc ggggcagcgg gtcggttacg taatgctcga
     1441 cctcgacaag cgcggacgcg acgttcggcg gctggtccat tcgctggaag gatggattat
     1501 cgccacgctc gccgagctag gggtggagtc gcaccgggcg cccgggcgga tcgggatctg
     1561 ggttggaagc ggttccgagg aagcgaagat cgcggcgctc ggaatccgcg tgaagcgctg
     1621 ggtcacgctc cacggctttt cgatcaacgt cgacccggac ttgtcgcatt tcggcggtat
     1681 cgtgccctgc gggatcagcg aattcggcgt caccagcctc gcaaaacaag ggaaagaatc
     1741 gtccatgtcg ggcgttgatg ccgccttgag gggttcgttt caccgttttc tcaatgactt
     1801 gggataatgc atatcaagtc tcttgatggt gacgagccgt tcagattatg ctgagcgcga
     1861 tttgcgaaac gggcgaccgt tgcagatcgc aataaatagg gagttttgaa tgcgtgctct
     1921 gatcctggtc gctggtgcgg ccctggcggt tgctgcctgc agcaacaacg ccgctgacga
     1981 caatatggct gtcgataacc tgactgccga aaatctcgtc atcgagaacg acatgacgac
     2041 cgacatgaac gccgtcgaca tgaatgcgac gaccgacatg aacacggtcg acatgaatgc
     2101 ggtcgacacc aacacgacga ccgacacgac gaccaacatg taatcggcgg ctccgccaag
     2161 gagccgttcg gacttgaggc tgccgggttc gcccggcagc ctcttttttg ggatagtccc
     2221 gccgctgatc tggaggcaat cgatgcgctt agtcctgtca ctcggagccc tcgcgctcgc
     2281 ttcgtgcgga gggaatgcgc cgaccaacaa ttcagcggtg accgaggaaa gcgacgctac
     2341 cgaagtcacc gcagtcaacg atgtcactgc gatcgacgcc gccaccggcg aggccgccga
     2401 catggcggcc gacgtcaact ataccttcaa cgaagaagcg gcgaacgact cgtccgctgc
     2461 agctgaaaac tcgacaaacg actccgcctc cgaccgctag gcgaggccaa ccaccttgtg
     2521 cgcctgaaga gtgagccgcc atcgcggccg ctccatcgcc agcgcgattg ccgcttcgac
     2581 agcccggtcg ccctctgcac agtccatcgg ctggacgagg aaatggtcga agtcccagct
     2641 ttcgagctcg accggatcaa tgcccgactg tggccacacg agcttgagct cgttgcccga
     2701 tttctggacg acttcggttc ccgccttggg gctgacgcag acccagtcga gccccgcggc
     2761 gacaggcaag gttccgttcg tttcaatcgc gactcgaaat ccccgctcgt ggagggcgcc
     2821 aataaggtcc gtgtcgagct ggagcatcgg ctccccgccg gtgatgacca ccagccggtt
     2881 ctccgagcct tctccccatt cctcctcgac cgcgccggcc agcgcatcgg cgctcttgaa
     2941 ttttcccccg cccggcccgt cggtgccgac gaaatccgtg tcgcaaaagt tgcattgcgc
     3001 gcttgcccgg tcctgctccc ggccagacca caaattgcac ccggcaaagc gaaggaacac
     3061 cgccctgctc cccgcctgca ccccttcacc ctggagcgtc aggaacatct ccttgaccgc
     3121 gtaggtcatt gctccggccg ctccgcatag cgggtgggat ccgggagccc tgcttcggcg
     3181 aagccgccgg cgcgcagcct gcacgaatcg cacaggccgc aatgctccag ctctgaagtc
     3241 ggatcgtagc acgaccagct catcgcggcg tcgaggccga gccggctcgc ctcgcgcacg
     3301 atgtcggcct tgctgaggtc gatcagcggc gtgtgcactt cgaacccctc gccttcgatg
     3361 cctgccttgg tgccgaggtt ggccatcgcc tcgaacgctc ggatgaagtc cggacggcag
     3421 tcgggatagc ccgaatagtc gatcgcattg acgccgatga acaggtcgcg ggcgccggct
     3481 gcttccgcca ggccgaggca caaagacagg aagatgatgt tgcgggccgg aacataggtg
     3541 accggaatat cgtcgcccgg gccggacttc ggaacggcga tgtcgtcggt tagcgccgac
     3601 ccgccgaact gccgcaggtc gagcggaagg acgatgtggc gctccgcccc caacgaccgg
     3661 gcgatgttcg ctgcagcttc cagctcgatt gaatggcgct ggccgtattg caccgtcagc
     3721 gcgagcagcg aatagccgcg ctcgcgcgcg attgcggcgg tcaccatcga atcgagtccg
     3781 cccgacagca gtacgacggc cttggccatt acagcttgag ccccagcctt ggcgccgccc
     3841 agaacatcac tgcatagagc gccaaggttc ccgcgagcgc cagcgcgagc gcggcccaga
     3901 agccgagccc ggtccggagc agcaacggga gcaccgcgaa catcggaagc gaaggaagga
     3961 tgaaccagaa cgccccgatc gaaaggccgg cgatgcgctc gggatcgccg gtgtcgcgcc
     4021 acagccagat catcgccagc agcgaggtca gaggcagcga tacgatgagc ccgccccagc
     4081 cggggtaccg ccgcgcgacc tctgacgcga cagcgacgat caggccggag atggccgcct
     4141 tgatgaccag gtacagcatc gcgcgccctc tacgtccttc gccccagcaa aagaagggcc
     4201 gcccgtcgct tggaagggcg gcccagttaa tcgggcctcg gcccgatcgg gaggaaagcg
     4261 tgccgaatcc ggcactcgtc ccttctattc gaagatggtt aaacgcccgc ttaatgagcg
     4321 ggacaatcgc ccacgcggtg tgcctgaagc ttgtatttga acggcgctcc gtccgaaatt
     4381 ccctgcgttt cgacgcgcag cgagcggggg gtcagcatcg tcacgtcact ttgcccgaag
     4441 ccgccgccgg cgcaggtata atggacggtc gcgcgggtgc cgtcgtcgcg aatcacgctg
     4501 cggctgcact tggccttgcg gtgctcgaac tgggcgaaca tcgcagggtt ggcgatgcag
     4561 acctgaaccg gatcggattt gccgcgcgca atctcccaca gcccgccttc ggcccggctc
     4621 aaagcggacg ggccggcggc ggcaagcgca gcgcccgcgc caacgactcc ggcgaatctt
     4681 gcgagcctct tcacgaagcc cctaatagca cgaattcgtt gacgaaaaac gggattcagg
     4741 aaacgtcttc gagagcgatc gggaagcttg tggagcagaa ggcgcaatcg acccggatca
     4801 tcccgtcctc gccgaccatc gccgcccgtt cctcggccgg gaagcgagcg atcaccgagc
     4861 gcacatattg cgggtcgcag cggcagccct tgcgaagcgg cagcggctcc atggtccgca
     4921 cctcggcctc gtcgtggaac aggcgccagg ttaggtcgtc gagagtcagc ccgggatcgg
     4981 tcagctcctc cgcctttacc gacccggcga ggatggcgac gtgcggccag tcgggatggt
     5041 cgagccgggt gtgcagccgg tcacgcccct cctcgccttc gggcaggtgc tggaacagca
     5101 ggccgccggc gctccagccc tcgtcgcgct tttcggcggc cagccggacg atgctcggga
     5161 tctgctccga ctgggcgaag aagctctccg cggcatgggc gaggctgtcg ccttcgagcg
     5221 gaacgatccc ctgatagcgc tcgtcgactc cgggatggtc gaaggtaatc gccagatagc
     5281 ctttgccgaa cagtgcgaac aacgaggggt tcggccccgc ctcggctagc cgtgccgggt
     5341 cgtgcttgac gtagccgcga agctcgccgc cgagataatc gcacaccagc aggtcgacgg
     5401 ctccgttctc ggtctgcgcc tgcagggtga cctgcccctc cggctccttc agcatcgccc
     5461 cgagcagcgc cgtcagggtc agggcctcgg cgagcagccg ctcgatgacc ggcggataac
     5521 cgtgattggc gaggatggaa tcgagcaccg gcccgattcg cgcaaaacgc ccgcgggcgt
     5581 tgcgcgccgg aatggttacg ccaagtgcga cgtccgtgtt cagctcaatt gtcggcattc
     5641 gggataaata gggtcacggc cgaaatggaa caaccaagcg ccgatcgcgg agtgctgctt
     5701 gggcgccgca taggggaaca cccgtatacg tcgcataccc ttccgctgtt attgcgaatc
     5761 tatcgcaacg aatggagggt caaatgcggt tgggccggtc agcacgaaga cggtgcgatg
     5821 cgctggacgt ggcggcaatc tggccttcgt gcgcgcagac atacggggtc gccatccccg
     5881 acgttgaccg tgacggtacg gatcggcccg ccggcaagcc cgaggaggca attgaatatg
     5941 gaatatggtg aagcgatcag cgccagcgcg aaagctcgag ccctcgagat tgctcgcttc
     6001 aaactgtcag caggcggcac cgatatacgc aagattgcga ccgaggccgt ttccgaggct
     6061 tattgcgttt gcgtggtcga gggcgaagat gccgccgagg ggcagctctc tccaatccac
     6121 ggcaacttga tcgatgatat cgaggcccgt ctctcgcagt ttgttgcgca ggagtgctgc
     6181 tgatggcgct ccaccacctt gggcctggcg aaccggcaca ccttccgtcg cggcttgccg
     6241 acggcaacgg aagagcggtt gcactcgtga agaccgacag gtttgaagca gcgcagcttg
     6301 ttctggccgc cggcgagtca atcgctcgac actcggttcc aggctatgcg acgatccagt
     6361 gcctcaatgg cacagtcctc cttgagacgg acgagacgat cgagcttaag tccggtgatt
     6421 ggctttatct cgatcgcgct caggagcact ctgtgcaggc agtcgacgac tcttcgctgc
     6481 tgctcacgat cctgtttgag tgaactcgag acaatagtcg ctgatggggg tctaagtacc
     6541 taagccgctt cggccggcac ctcgtacttg gcggcggctg ctgaaagcct gtcgacgaat
     6601 tcgcggatat gctcctcctc gatgacgagc ggcgggagca cgcgcatcac attgtcgccg
     6661 gccgccacgg tcagcagccc gcgcccgcga agccagttca cgaaggcgcg gctgtcggtc
     6721 ttcatcttga ttccgagcat cagccccatc ccgcggacgc tgtcgaacag ctcgtcgtgg
     6781 ttgggaatca tctgctcgag cgccgagcgc agccgttcgc cggtctggcg gacgtgggcg
     6841 aggaactcct cgttggcgac cacgtcgagc accgcctgcc cggccgccat cgccagcggg
     6901 ttgccgccgt aggtggagcc gtgggtgccg atcaccatcc cgctcgccgc ccgctcggtg
     6961 gcgaggcagg cgcccagtgg gaatccgccg ccgatgccct tggcgctggc catgatgtcg
     7021 ggccggatgt cgtactgctc gtgagcgaac agggtgccgg tgcggcccat cccgcactgc
     7081 acttcgtcga gcaccagcat caaatcgttg acgtcggcga attcgcgaag cccttgcatg
     7141 aaggccttgc tcgcagggcg aatcccgccc tcgccctgga ccggctcaag caggaagccg
     7201 gcggtgttgc cgtcgacggc gttcagcgcc gcgtcgagat tgtcgaactc gacgaccttg
     7261 aagccgggaa gaagcggagc aaagccgtcg cggagcttct cctggttggt ggcgctgatc
     7321 gtcgccatcg tccgcccgtg gaaggcattg gagaaggtga tcaggtcatg cttctcggga
     7381 ttgcccttgg catggtgata gcggcgcgca gtcttgatcg cgcattcgac ggcttcggcg
     7441 cccgaattgg tgaaaaaaac ggtgtcggcg aaagtcaggt cgcacaaccg cttcgcgaac
     7501 gcctccccct gcggcgaccc gtagaggttc gacacgtgca tcagcttcgc cgcctgctcc
     7561 tggattgcct tggtcaaatg cgggtggccg tggccgagca ggttgaccgc gatacccgag
     7621 gcgaagtcga gatatttctc gccgttctcg ccgtacagat agaccccctc ccccttgacc
     7681 ggccgcacct cgcagcgtgc gtaaacgggc atgagcggcg tgatggccat cggcgacttc
     7741 tcctgtggac tgggcggtct tgggtgtagg cgtcgctata gccacggcag gccaaaaata
     7801 aaggcgcgcc cggtcgtccc gggcgcgccc ttttgtcctg atcgctcagg cttagcggcg
     7861 gtagccgtac ccgcggcgat agtcgcggtc cgaatatcgg cgcagctcgt agtgaagccg
     7921 agcgatccgc tggttcatta cccgcgcctc gtaggcggaa accccgcggc gcgagacgtt
     7981 gcgaagcgca cgctcggccg agttgatgtc ccggcgaagg tcgcgctctt cggcgcgggt
     8041 cagccggccg gcacggtcga gggcatgcat ctgcatgcgg acctgctgga gctggcgagc
     8101 ccactggtgg gcaccctggt tgtacccgta ggcatagccg tagggggcgc cataggctgg
     8161 cgcgccgtat gccgggccga ggttgccgtg gctctgcacg gaaatgctcc aggcctgggc
     8221 ggaagccggc gcggcgacga cgagagccga agcagcggca gcaagagaaa tcaaaatggt
     8281 acgcatcgtt gctctccttt cgagcggttg atgcattagc ttttagggca cccggcttgt
     8341 tccagcgctg aacgccgctg acagccgccg ttcaacttgt ttaccacccg taatgtcccg
     8401 ttcaccttac gcccgctcaa cgcatggtcg tgccgctccg caggcggctc caagcgcgct
     8461 tcgctaactc gaagtttgtt cccgaccgcc cccgattcgc acggagtcaa ggttgaaaat
     8521 tcaaaatatt taagctatct tactgaaatg cttacatttc ttcgcacagc cgcgctggcg
     8581 gcaacggtcc tcctcgtgcc tgcggcaagc gccggcgtcg ttacggcgtc ggtcgcgagc
     8641 caggcggtca ccacgcccgc tccgaagatc gttccggcgg tcgccccggc cgcgcccaag
     8701 ccacccgcgt tcgaggccgc gatggggctc gagccggcgc acgatcacgg ctccggcctt
     8761 gcgccgggcc agactgccca ggactttcgc gactggatcc gccgctcgcc cgccaatcgc
     8821 gcgagcctcg ccggctttcg cgcgcacctt gccgccaagg gcgtcgacag tgtcatcccg
     8881 ctttggcagc tggtccgcac ctcttcgtct tggaagggtt gcggtgccga gccgttcgag
     8941 gctccgcccg ccgacaagtg ggaccatatc gtcaagacgc tgcagttcgt ccgcgacaac
     9001 gtcgaacccg cggtcggcga agtcgaggcg ctatccgcct atcgcaacgc tggcctcaac
     9061 gcctgctcga acggagcgcc caagagcgcc caccgcgaat tcttcgcgct cgacctgacg
     9121 ccggtgaacg cggcggtcgc ccgagccgac atgatccggt cggtctgctc cgcccacgcc
     9181 cgcaacggcc gcgcctacga caccggcctc ggattctatt cgggccgccg cttccacgtc
     9241 gactcgtcgg gcttccgcaa atggggctcc aacggcaaag gcgcgacgag tccctgtgtc
     9301 agccgggcct gaagttaaga cagctctatt ggctccctag cggtcgtccc ttagggacac
     9361 tccggcaaaa gccatttacc ggattggccg gactggtccc cgagcggtca gcttaagcgc
     9421 ctcattgtag tccgattccc attgctgtct cgcgcaaggt ggctttccgc tcgagaacac
     9481 tccgttgaga caggcataaa ccatccaatc tacggggcga acaggagagg ctgcgggcga
     9541 ccccgtcagg tactgataga cctctgtggt atcgacgacg ggaagcgtat gctggcccgt
     9601 ttggacgtga ggacccttta ggcaataatc gtcagagggc ttgacccaac aagtccctga
     9661 aggtcctccc ccgcccttta gacaatagcc gtgccaggtc gtccgtccca caaggccgcg
     9721 acgcctgacg accagatcgc attccgtgtc cagcgtgcag gctttcggat cttgcggtac
     9781 gcgcgcgatg agacatgcac cgcccgagcc gttggttgaa aagagtctct caccgggcgc
     9841 gggcgatcga atcgtgaatt ttccgctgag tagccgcgga ttatgacgag tcccggggaa
     9901 ctgaacctgg ggtcgcgtga cctcttgcgc ttcaatcacc gcaagttgga tgcttccgtc
     9961 gatggtcgtt gccgtgcgcg gctcggcacc tgtctcgata ttacaggaat tcagcgcgac
    10021 cgcagcaatt gcgaacaata cccgcttcat cagcccctcc cctgcgtccc acgcttatca
    10081 caaattggaa agtgaacgat aagcaaagag tgagcagccc ttgcttgggt tcgggctttt
    10141 acgtcaggaa atgctggcgc ttccggcacc gcctaagcct tgatcttcca cccgctcctc
    10201 aggagcccgt agcacgtccc ccacagcgcc acgttcagca ccagcaggcc cgccgcgccg
    10261 acgaggatcg gcgaatcgct cactcccagg aagccgtagc ggaagccgga gatcacgtag
    10321 aagaaggggt tagcgtggct gatcgcctgg aacgccggcg ccagcgcatc gaccgaataa
    10381 aaggtgcccg agagcagcga caggggtgca atgatgaaat tcgtcaccgc cgctgcatgg
    10441 tcgaacttct ccgcccatag cgaggtgatg aggccgagga aggacagcat cagcgcggcc
    10501 atcagcgcga accagaaggc agcgagggga tgcgcaactg ataccgaaac ccccggccac
    10561 agcgccattg ctagccacac cgcgaagccg acgaagaagg cgcgggtcac cgccgccccg
    10621 accaggcccg ccatcagctc gccggtggac agcggcggca tcaaataatc gacgatattg
    10681 ccctggatct tgcccaccag cagcgagaag ctggcattgg cgaaggcgtt ctggagcatc
    10741 gccatgacga tcaggcccgg agcgaggaaa tcggcgaaat ggactcccat caccgtcctc
    10801 ccgccgcgcc cgagtgcgat ggtgaagatc gcgagataca gcaaggtcgt cagcgccggt
    10861 ccccagaccg tctgcagctg caccttgaag aaccggcgca cctccttgat atagagggtc
    10921 ttgagccctc cccaattgac tccgctcagc accggctctc ccggcatgct gacgagccaa
    10981 ggcgaggatt ggggactggc aggccggtcg atcacgctta aggcgcctat cggctggcgt
    11041 cgtgggcggc aaggcggccc tggaattttg aaagacccgg agtgaattcg aatgtcatgg
    11101 actgaagagc gaatcgagca actcaagcaa atgtggcacg acggcgccac cgccagcgaa
    11161 atcgccgaca agctcggcgg agtgagccgc aatgcggtca tcggcaaggc gcaccggctc
    11221 gggctcgaag cgcgtccgtc gccggtgaag ccgggcgagg aaaaggaacc ggcacccgca
    11281 aaaacggcga aaaaagcgca acctgccccc gctcacaagc cggccgcggc aaagccgaag
    11341 gccgatccgg cgccgcccat ccccggctcc gagcctgcgc ggcagcagcg gacaggcggc
    11401 gaccagatgc agtatcgctc ggtcggcccc ggcggcttca tccgtcaggg gccgggcgac
    11461 cagcaggcgc c
//
LOCUS       DATAKH010000036         4672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_24435,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000036 DATAKH010000000
VERSION     DATAKH010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4672
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24435"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            339..1340
                     /gene="galE"
                     /locus_tag="VHN55_01355"
     CDS             339..1340
                     /gene="galE"
                     /locus_tag="VHN55_01355"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEX2802618.1"
                     /translation="MPKPSVLVTGGAGYIGSHAVLALKDGGWPVAVVDDLSNGTREIV
                     PEDVPFYEGNIADRSLVGRIFAEQGISAIMHFAGSIVVPESVEKPLLYYANNTVATHS
                     LVSTAVESGVRHILFSSTAATYGSPERVPIGEEDPKEPINPYGASKLMTERMLADCSA
                     AYPLNYGALRYFNVSGADPDLRAGQIGRGSTHLIKIAVEAAVGKRGHVDVFGTDYPTP
                     DGTCVRDYIHVSDLADAHVLALDRLIERPTDNLVLNCGYGEGLSVLEVLDAVDRVAEK
                     PVPREMKPRRPGDPPILVASNRRLVETLDWTPRFADIDVIVTHALHWERKLQGLEAE"
     gene            1337..2950
                     /locus_tag="VHN55_01360"
     CDS             1337..2950
                     /locus_tag="VHN55_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX2802619.1"
                     /translation="MKSFRLLIAPLALLALAAAPAPQSADEAAAGRVRADVEFLASDL
                     LDGRDTGSRGHEIGATYVASQFRAIGLKPGGTGGSWYQQVPFRQSHHKSAPKASLVIR
                     NEVVRLDENAFAARPSLTQKSRKIDAPLVFVGHGVSDSKLGIDDYAGLDVRGKIVVAL
                     QGSPGGLPSEVSAHLDSSKSTTAAAKGAAGLIQIAGTGGRGGSVGRFGRPVIDWVDPT
                     GKSASEGTTLAVVGAISRQAAERLFDAANHSLSSFIASGDNPGAMRGFAIPARLRLTD
                     EMEWRDFTSPEVIGLLPGSDPLLAQEYVVLMGHLDHLGVKDSPKPGEDSIYNGALDNA
                     AGVATMLEAARKFVASGKPPRRSVLFIANTGEEKGLRGADYFAAQPTVPRDKIVGVVD
                     LDMPVLLYPFTDIVAFGGDHSTVARTIADAAGSMGVSVSPDPMPDEAIFVRSDHYRFV
                     TRGIPAILLMTGYANGGEAKWKEFFDKTYHQPTDDLSQPILWDQGARYAELNYRISRA
                     LADADQRPLWYKGDYFGDTFAPSQPKADR"
     gene            3049..3174
                     /gene="ykgO"
                     /locus_tag="VHN55_01365"
     CDS             3049..3174
                     /gene="ykgO"
                     /locus_tag="VHN55_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEX2802620.1"
                     /translation="MKVRNSLKSLKARHRDCRVIRRRGRTYVINKTNRRFKARQG"
     gene            3268..3534
                     /locus_tag="VHN55_01370"
     CDS             3268..3534
                     /locus_tag="VHN55_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802621.1"
                     /translation="MKTLWISIAAGAMVGLAAAAAAQAAQEQKPQATPKGWNYEIKDG
                     KRVPKGNRVTNADGSWREEVRVGKCVTIKEKSAAGEYKESRRCD"
     gene            complement(3531..3929)
                     /locus_tag="VHN55_01375"
     CDS             complement(3531..3929)
                     /locus_tag="VHN55_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802622.1"
                     /translation="MRIAAFALALALAVSACDNGGQSRDAQPTQSIKVRSDAQKGLHD
                     ASDLNRAIALKRAIYDSGYRCQRITSSGYVADYENLEMWMARCDDGRDWAVFIGPDGS
                     AQVRDCKDVARFGLPECAIADEAAAEGNAA"
     gene            complement(3979..>4672)
                     /locus_tag="VHN55_01380"
     CDS             complement(3979..>4672)
                     /locus_tag="VHN55_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEX2802623.1"
                     /translation="SADEVGAAWDYAVANMRGDRPRVIVEEFVRFDSEITLLTVSTKD
                     GVLYCPPVGHRQEHGDYRESWQPASLPGAALASAQDQAKRVVEALGGYGIFGVEFFIR
                     GEEAIFSELSPRPHDTGMVTLVSQYPNEFELHLRAVLGLPIPAIDLAGPSASAVILAG
                     RESENFAYEGIASALALGAADRPIDVRIFAKPRTLKNRRMGVALARAASIEEAVERAK
                     AAAAAVRIRYGD"
BASE COUNT          816 a         1545 c         1504 g          807 t
ORIGIN      
        1 agggatggct gttcggccgc gcgatctcgg ccgaagcggt ccgcgcgttc ctgagcgcca
       61 aagataccgc ggagatatcc gaacgttttg cggggtcggg cgggagatcc gcgcgactga
      121 agtgagcccg cccggaactc cgcagccggc ccctcgtaca ttatcctgag agttcgatca
      181 ggaaggagct tagtggtgct cagggcaatt ggctgcatcg tcttattcgt cttcatcatc
      241 gggcttctgg tcgtgttcgg gctgctcgac gccatcttct gagccggcgc ccaccgagaa
      301 tgctggcgcg agcggcaccc cttcgctagc caccggcaat gcccaaacca tcagtcctgg
      361 tcaccggcgg cgccggttat atcggcagcc atgcggtcct cgcgctgaag gacggcggct
      421 ggccggtcgc ggtcgtcgac gacctgtcca acggaacccg cgaaatcgtt cccgaagatg
      481 tgccgtttta cgaaggcaat atcgccgacc ggtcgctggt ggggcggatc ttcgccgagc
      541 agggcatcag cgcgatcatg catttcgccg ggtcgatcgt ggtccccgaa agcgtcgaga
      601 agccgcttct ttattatgcc aacaacacgg tcgcgaccca ttcgctggtc tcgacggcgg
      661 tcgagtcggg cgttcgccac atcctcttct cctcgacggc agccacctac ggctcgcccg
      721 agcgggtccc gatcggcgag gaggacccga aagagccgat caacccttat ggggcgtcga
      781 agctgatgac cgaacggatg cttgccgact gttccgcggc ctatccgctc aattatggcg
      841 cgcttcgcta tttcaacgtc tcgggcgccg accccgacct tcgcgccggg cagatcggca
      901 ggggatcgac ccacctcatc aagatcgccg tcgaagcggc ggtcggcaag cgcggccacg
      961 tcgatgtctt cggtaccgac tatccgacgc ctgacgggac ctgcgtccgc gattacatcc
     1021 acgtcagcga ccttgccgac gcgcatgtgc tggcgctcga ccggcttatc gagcggccca
     1081 cagacaatct cgtcctcaat tgcggctacg gcgaaggtct gtcggtgctg gaggtcctcg
     1141 acgcggtcga ccgggtcgcc gagaagccgg tcccgcgcga gatgaagccg cgccggccag
     1201 gcgatccccc gattctggtc gcgtccaacc gccggttggt cgaaacgctc gactggactc
     1261 cgcgctttgc ggacatcgac gtgatcgtca cccacgcgct tcactgggag cgcaagctgc
     1321 aggggctaga ggccgagtga aatccttccg attgctgatc gcgccgctgg ccttgcttgc
     1381 ccttgccgcg gcgcctgccc cgcaatctgc agacgaagcg gcggccgggc gagtccgagc
     1441 cgacgtggaa ttcctggcca gcgacctcct cgacggccgc gacaccggct ccaggggcca
     1501 tgagatcggt gccacctatg ttgcatcgca gttccgtgcg atcgggctga agccgggcgg
     1561 caccggcgga agctggtacc agcaggtgcc gttccggcag tcgcaccaca aaagcgcgcc
     1621 caaggcctcg cttgtgatcc gaaacgaggt ggtgaggctc gacgaaaatg cgttcgcggc
     1681 gcggccgagc ctgacccaga agtcacgcaa aatcgacgcg cctctggtct tcgtcggcca
     1741 cggagtcagc gattcgaagc ttgggatcga cgattatgcc ggcctcgacg ttcgcgggaa
     1801 gatcgtcgtc gcgctccagg gctcgcccgg cggcctgccg agcgaggttt cggcgcatct
     1861 cgattcgagc aagtcgacga ccgccgcggc gaagggcgcg gccgggctga tccagatcgc
     1921 cgggaccggc gggcgcggag gcagtgtggg ccggttcggc cggcccgtca tcgactgggt
     1981 cgatcccacc ggcaagtcag cgagcgaggg caccacgctc gccgtggtcg gggcgatttc
     2041 gaggcaggcc gcggagcggc tgttcgacgc cgccaatcac agcctttcga gtttcatcgc
     2101 ctcgggagac aaccccggcg cgatgcgcgg cttcgcaatt ccggcgcggc tccgactgac
     2161 cgacgagatg gaatggcggg atttcaccag tcccgaagtt atcgggctcc ttccggggtc
     2221 ggacccgctg ctcgcccagg aatatgtcgt cctgatggga cacctcgacc accttggagt
     2281 gaaggacagc ccgaagccgg gtgaggactc gatttataac ggcgcgctcg acaatgccgc
     2341 cggagtggcg acgatgctcg aggcggcacg caagttcgtc gcgtcgggca agccgccgcg
     2401 ccggtcggtc ctgttcatcg ccaataccgg cgaggagaag ggacttcgcg gcgccgatta
     2461 ttttgccgcc cagccgaccg ttcccaggga caagatcgtc ggtgtcgtcg atctcgacat
     2521 gccggtgctt ctctatccat tcaccgacat cgtcgccttc ggcggcgacc attcgacggt
     2581 cgctcgaacg atcgccgatg ccgccgggtc gatgggcgta tcggtctcgc ccgacccgat
     2641 gccggacgag gcgatcttcg tccgttccga ccattatcgc ttcgtcaccc gcggaatccc
     2701 ggcgatcctg ttgatgaccg gctatgcgaa cggcggcgag gcgaagtgga aggagttctt
     2761 cgacaagacc tatcaccagc cgaccgacga cctgtcgcag ccgatcctgt gggaccaggg
     2821 cgcccgctat gccgagctca actaccggat atcgcgcgct ctcgccgacg ccgaccagcg
     2881 gccattatgg tacaagggcg attatttcgg cgacacgttc gcgccgtcgc agccgaaggc
     2941 ggaccgctag gcgatcttga cttgcggacg ctctccccat aggtgagccg ccggttttcg
     3001 agaaacctcc cacattccac gtttttgaag gacgaggcgg cgcgcccgat gaaagttcgt
     3061 aattctctca agtcgctgaa ggcccggcac cgcgattgcc gagtcatccg ccgccgcggc
     3121 cggacctacg tcatcaacaa gacgaaccgg cgcttcaagg ctcgccaggg ctaagcccac
     3181 acccgatttc gccgctggat tctctcgccc cgcttcaccg cgggttcacg tgcgtctgtc
     3241 tataaggcaa cactagggag tagtgtgatg aagacgcttt ggatcagcat tgcagcaggc
     3301 gcgatggtcg gccttgccgc ggccgctgcc gcccaggcgg cgcaggagca gaagccgcag
     3361 gcgacgccca aggggtggaa ctacgagatc aaggacggca agcgcgtacc caagggcaac
     3421 cgcgtcacca atgcggacgg cagctggcgc gaagaggtcc gggtcggcaa gtgcgtcacc
     3481 atcaaggaaa agtccgcggc cggcgaatat aaggaaagcc gccgctgcga ctaagcggcg
     3541 ttgccttcgg ccgccgcctc gtccgcgatc gcacattccg gcaatccaaa gcgggcgacg
     3601 tccttgcagt cgcgaacctg cgcgcttccg tccgggccga tgaacaccgc ccagtcgcgc
     3661 ccgtcgtcgc agcgcgccat ccacatctcc agattctcgt agtcggcgac atagcctgag
     3721 ctggtgatcc gctggcaacg gtagccggaa tcgtagatcg cgcgcttcag agcgatcgct
     3781 cggttcaggt cgctggcgtc gtgaagcccc ttttgggcgt cacttctgac cttgatcgat
     3841 tgcgtcggct gagcgtctcg cgactgcccg ccgttgtcgc aggccgacac cgcaagcgcc
     3901 aaagccaggg caaaagctgc gatacgcatt cgtcctcctg tccccacgcc aacgcaaaag
     3961 ccgggcgaag gcttcacgct agtcgccata gcggattcgg acggcagccg cggccgcctt
     4021 cgctcgctcg acggcctcct cgatagatgc agcgcgggca agcgcaacgc ccatccgccg
     4081 gttcttcaga gttctgggct tggcgaagat cctgacgtct atcggtctgt ccgcggcgcc
     4141 gagcgcgagc gccgacgcga tcccctcata ggcgaagttt tcgctctcgc ggccggcgag
     4201 gatcactgcc gacgccgacg ggccggcgag gtcgatggcg ggaatcggga gcccgagcac
     4261 tgcgcgcagg tgaagctcga actcgttggg atattgcgag acgagggtga ccattccggt
     4321 atcgtggggg cgcgggctga gctcggaaaa gatcgcctct tccccgcgga tgaagaattc
     4381 gacgccgaag attccgtacc cgccgagggc ttcgaccacc cgcttcgcct ggtcctgcgc
     4441 cgaagccagc gccgcaccgg ggagcgaagc aggctgccag ctttcgcgat agtcgccatg
     4501 ctcctgccgg tgcccgaccg gcgggcaata aagcacgccg tccttcgtcg agacggtgag
     4561 aagggtgatc tcgctgtcga agcggacgaa ttcctcgacg attacccgcg gtcggtcgcc
     4621 gcgcatgttg gcgacagcat agtcccaggc ggcgccgacc tcatctgcgc tc
//
LOCUS       DATAKH010000037        12396 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_31637,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000037 DATAKH010000000
VERSION     DATAKH010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 12396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12396
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31637"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VHN55_01385"
     CDS             complement(<1..829)
                     /locus_tag="VHN55_01385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802624.1"
                     /translation="MRRDSPGARAIAGKGIMDMSSFIKILAASAFVAAASPSFAQATR
                     TWVSGVGDDANPCSRTAPCKTFAGAISKTASNGEINCLDPGGFGAVTITKSITIDCTG
                     TLGSILNSGVNGVIVNDGSTGAPNTIEVMLRGLTIDGGGSLGGLNGIRFLSGRSLVVE
                     DLFIQNQTGGSGISLQPGGTAEFYAENVTVTDGATGILVQPTGATGTIRAVLRNVRSQ
                     NNSGVGLRLDTTGNTASNGIVVLADKSSFSGNGDGIIVNSPGAGTQAQAMITDSNIFA
                     "
     gene            complement(890..1426)
                     /gene="hslV"
                     /locus_tag="VHN55_01390"
     CDS             complement(890..1426)
                     /gene="hslV"
                     /locus_tag="VHN55_01390"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010414680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEX2802625.1"
                     /translation="MEQYHGTTILGVKKGGKTVIAGDGQVSLGNTVIKPNAKKVRRLG
                     EDGSVIGGFAGATADAFTLFERLEKKLEQYHGQLLRAAVELAKDWRMDKYLRNLEAMM
                     IVADKDTMLILTGNGDVLEPEGGIAAIGSGGNYALAAARALSDYEPDPEKLARRAMGI
                     AAEVCVFTNDQLTVETIG"
     gene            complement(1469..1987)
                     /locus_tag="VHN55_01395"
     CDS             complement(1469..1987)
                     /locus_tag="VHN55_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802626.1"
                     /translation="MPTSWLYRILGIAAAAAALLWLVQSRDRWRDEARANEARFHQEQ
                     AAHAATVAGFRAAADRARREDAENLARVKSEQTAINERTAHDFESRIAAARASAQRLR
                     GQAAAATADPRAGGATPVPGLRASTESVAETAGEDRLPDTDRLIATEQAIQLDELIKW
                     VKAQSAVSANGD"
     gene            complement(1987..2289)
                     /locus_tag="VHN55_01400"
     CDS             complement(1987..2289)
                     /locus_tag="VHN55_01400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802627.1"
                     /translation="MEALPPPATFAEGQRQIYGWLAAAAGVFCGMCSVAMVCLLMWGG
                     WSAAEEHTIVVIFGGALAGFIVAMTSVIVGLLVGGPVGRFKGSASRDGVTVEAEGD"
     gene            complement(2364..2906)
                     /locus_tag="VHN55_01405"
     CDS             complement(2364..2906)
                     /locus_tag="VHN55_01405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006967366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 108 family protein"
                     /protein_id="HEX2802628.1"
                     /translation="MDIDELIDALIDREGGFTNHPDDRGGATNYGITEAVARAHGYSG
                     AMRELPRAEAAAIYKRLYWLRPRFDQVAKRSRKIAAELFDTVANMGPAVAATFLQRAL
                     SALNRNRKDYADLVPDGRIGPATLAALDTFLELRGRSGGEQVLLKALDALQGERYLRL
                     AERRPANEAFLYGWLANRVG"
     gene            complement(2990..3670)
                     /locus_tag="VHN55_01410"
     CDS             complement(2990..3670)
                     /locus_tag="VHN55_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006952770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX2802629.1"
                     /translation="MTGQPQTDYSALDDVTLAQLCAKRDRQAQRHLVTASNQRLFRAA
                     WSILKDRGEAEEAVQAGYLNAFSAISGFEGRSSLSTWLTRIVVNESLGRMRARVRRRE
                     QLESEGVALLDTYRDKLGRGSDEPAPDVALAREQLRILIEQAVAELPDGFRSVFVLRE
                     IEGLSIEETAEALEIRPATVKTRLHRARAKLQQALAPEVRGALQGSFPFAGADCAALT
                     ERVMALLD"
     gene            complement(3667..3990)
                     /locus_tag="VHN55_01415"
     CDS             complement(3667..3990)
                     /locus_tag="VHN55_01415"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX2802630.1"
                     /translation="MRRHSPVAAAAAWALLSVSAPAAAVPRTYTIVVDKMQFGDLPAR
                     VRKGDIIVWDNRDIFRHSVTAKGAFDVDLPAGKTVKMRVTRAGSFPFLCKYHPGMKGV
                     LRVAK"
     gene            complement(3994..4548)
                     /locus_tag="VHN55_01420"
     CDS             complement(3994..4548)
                     /locus_tag="VHN55_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEX2802631.1"
                     /translation="MAGRSQTEVWMIYGLPAILLAAALGIGGVAMADEGPSDAQIAHI
                     AYTAGSLDVAAAKQALAKSKNATVRQFASEMVRDHEAVNDKALSLVKQLGVTPEDNPT
                     SEALAKAAAQAEARLAKLDGPAFDKAYLANEIAFHGTVNGALESTLIPSADNGKLKSL
                     LETGLTLFREHQMHAVNLAAELKD"
     gene            complement(4636..5937)
                     /locus_tag="VHN55_01425"
     CDS             complement(4636..5937)
                     /locus_tag="VHN55_01425"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2802632.1"
                     /translation="MHKKIRLIAGAAALIAAAAPISATAQPRGDEPIAVPANVKQGID
                     FVYVDPQLNSVARRHQRPTNWLLRTIGLDGLFGDRRNAPHPMFAAFAQGLQQYQSSWG
                     RLPQVKIPAGAALKRGSTGKRVDLLRTRLGLPPGGGYDQRLFEMVTAYQRVHGLDPAD
                     GIAGRDTIASLNLGAVHYARRIAINLERAYRLPPTGKFSRYVLVDSGAAEVYLYDNDR
                     VVDAMRVIVGAPKTKTPMMAVIMRDAVANPYWHVPPELIRSLTARRIREDGLSYLKNF
                     HYEVLSDWSGRGRLVDPKTVDWKAIASGKKQPTILVRQLPGPWNSMGEMKFEMPNDYG
                     IYLHDTPQKDLFAKENRWISNGCVRLEDYKRFATWIFGGVPRATTPREQRFEVPEPFP
                     VYMTYFTVAPRGNGVVFRPDRYGFDAQAMPQMFGGREFASR"
     gene            6146..6601
                     /locus_tag="VHN55_01430"
     CDS             6146..6601
                     /locus_tag="VHN55_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802633.1"
                     /translation="MATTAEGRTPVHLWIVGILALLWNAIGCYDYVMTRMRDTDYLAK
                     MMPGTDPNAVLSYIDSFPVWAQAGWALGVWGGLVGAILLLIRSRYSVWAFALSLIGAV
                     LGLGYQIANPGGPAEMHEGIGGLIPYVIIAIAAFLLWYSWSQEKKGVLR"
     gene            complement(6644..9910)
                     /locus_tag="VHN55_01435"
     CDS             complement(6644..9910)
                     /locus_tag="VHN55_01435"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2802634.1"
                     /translation="MATLIAGSAFDMNDMIATGSLSEFFEWGEVQVGSSTDLVVTYSD
                     ETISEELHLTGDFQNYDSNGFPTTGTVSSASYTLDGVTLFTVSGMTISVEDFTAFVMN
                     DDLAGLFQTILSGDDSLQGSSGGDVLGGRAGNDTIDGGDGNDTLLGGGGNDVIHGDAG
                     DDFIASGFGNDTIDGGDGYDVIQVDADLTLSDTITITGSTADMTVSQGGVATSRIFNS
                     ELVQVWTRGDIGTLTIDASSYSSQPGTFLWMIDHNGTDVMIGSSGAEGFANIDVHVQG
                     NDIFTGNGGADIFDYTYAVTGMNGDTITDFDFDDVIDLSHNGDVEVSLGYARADTFIG
                     SAAFSGVAGEYRFSVGDGHTYVEADTDGDAVADQVLTLSNGQYSLVETAAGSNILVRG
                     ESIPASEGDDTIEGTEGADLLEGFGGDDTISGLGGDDTLRGGTGNDTLFGGTGNDLLS
                     EASGDGGPFGDDIYSGGGGYDRVSYFTTDGLHGLTIDLNITTAQNTGQGNDRLVSIEH
                     ITSNYGNDTLTGNAAANWFWTFSGFDTLSGNGGNDYFTVGADDKVVDGGDGIDTIEIA
                     DFSYAQVYQNAGGITVSLELQGAAQWVGTGYWTLSNIENLGGFSHNDHLTGDSNANVL
                     LGHIGNDTLNGGGGNDSLYGDGTWIMVGGVQTLVDDNVSDGPGGDDVLNGGAGNDYMF
                     GGRGNDILDGGTGRDQMVGGAGDDVFYVDDYYDEVIEVSGEGTDAVFASANFILGENV
                     EKLTQTGTVNLYAYGNSSDNILTGNSGISKLFGLDGNDTLDGGAGSDRLFGGLGDDIY
                     YVDSYSDRIIESDGEGTDSVFASDNAILDANVENITLTGSANIWAYGNELDNALTGNS
                     GNNKLFALDGNDIIDGGAGADKMWGDLGDDTYYVDNYNDRAIELAGEGIDTVFASANY
                     VLGDHVEKLTMTGSANLWAYGNGGDNVLSGNGGANKLYGLSGDDTLRGRAGNDLLEGG
                     AGRDVLFGESGADTFVFNDGDFAGMTSSTCDQVKDFSSADGDRIRLSGVDANTLAADD
                     QAFAFIGTGAFSGTAGELRYDQISGTTYVYGDTNGDSLADFMIRLDGAHTLTSGDFVL
                     "
     gene            10100..11206
                     /locus_tag="VHN55_01440"
     CDS             10100..11206
                     /locus_tag="VHN55_01440"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX2802635.1"
                     /translation="MKHALAVEDIYEAAFDDECFAGFAAALASAFGVRSALVHWVHKD
                     GAAEILSHSGYFTDEQLADYAQNFVAMDPWIEAAARAGQVNSVMNLEELVPAARFTNT
                     EFYNEYFRAMGDDTCRCLGIRLETESGAGYLALHRGLTEDAFDESVTSRLAEYLPHIR
                     RVLAIRSKISAAQHHAAGVSAAFDAIGLPILLVDARLRIKQANPAAEDLLREESALRC
                     RLGTLEAMSPAANALLRNAVNAALADEQGPPAAVAVPASMGAPLCLSIAPKVSRGQRL
                     ALILASAPSREQDDRAHRLRLLFRLSPSEAMLAVMLADGHSPAEIAEARQVSVGTVRL
                     QIKHIAAKLGCNRQSQIVGVVSALPPLFTPAGRS"
     gene            complement(11361..>12396)
                     /locus_tag="VHN55_01445"
     CDS             complement(11361..>12396)
                     /locus_tag="VHN55_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX2802636.1"
                     /translation="ITLAEYGFRLPSCIDNRPLRFNEWEAMRPQTTFVSATPGPWEMN
                     ATGGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLIHEAKETARKGYRTLVTTLTKRMAE
                     DLTEYLHEAGLKVRYMHSDVETLERIELIRELRLGVYDVLVGINLLREGLDIPECGLV
                     AILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADTITGSIERALAETSRRREKQL
                     EYNREHGITPESIKRQISDVMAHLTAREGLVVDTGDEERPHLVGHNLKAYIADLEERM
                     RKAAADLEFEEAARLRDEIRRLEEDELGIPDPDRVAPRPLGHSTEGKPGTRKGRYGKQ
                     SRTRFGGRRG"
BASE COUNT         2016 a         3969 c         3986 g         2425 t
ORIGIN      
        1 tggcgaagat gtttgaatcg gtgatcatcg cctgcgcctg ggttcccgcc ccgggagagt
       61 tgacgatgat tccgtcgccg ttgcccgaaa agctgctttt gtcggcgagg acaacgattc
      121 cgttggacgc tgtattgccc gtcgtatcga gcctaagtcc cactccggaa ttgttctgtg
      181 agcggacatt gcgaagcacc gcgcgaatcg ttccggtcgc ccctgtcggc tgcacgagaa
      241 tgcccgtcgc gccatcggtc acggtgacgt tctcggcata gaattcggcc gtgccgcctg
      301 gttggaggga gattccgctc ccgcccgtct ggttctgaat gaacaggtcc tcgaccacga
      361 gcgagcggcc ggacaggaag cggatgccgt tgagtccgcc aaggctcccc ccgccgtcga
      421 tcgtcaggcc gcgaagcatc acctcgatcg tgttcggagc tccggtgctc ccgtcgttga
      481 cgatcactcc gttgactccg gagttgagga tgcttccgag cgtgccggtg cagtctatgg
      541 tgatggactt ggtgatcgtg acggcgccga agccgcccgg atccaggcaa ttgatttcgc
      601 cgttcgatgc agtcttgctg atcgcacccg cgaacgtctt gcagggcgca gtccggctgc
      661 acgggttggc gtcatcgcca acgcccgaaa cccacgttcg agtcgcctgc gcgaacgacg
      721 gtgaagcggc ggcgacaaag gccgatgcgg ccagaatctt gatgaagctg ctcatatcca
      781 tgatcccctt accggcgatc gcccgtgccc ccggcgaatc gcgtctcatt ttccgagcag
      841 cggtgatctt atcacgacgg cattgcgcca gccatcggcg ccagccggac taaccgatgg
      901 tttcgaccgt cagctggtcg ttggtgaaca cgcagacctc ggcggcgatt cccatcgccc
      961 gccgggcgag cttctcggga tccggctcgt agtccgacag tgcgcgggcg gcggcgagcg
     1021 cataattgcc gcccgagccg atcgccgcga tcccgccttc gggctccaga acgtcgccgt
     1081 tgccggtcag gatcagcatc gtgtccttgt cggcgacgat catcatcgcc tcgaggttgc
     1141 gcaggtactt gtccatacgc caatccttgg cgagctcgac cgcggcccga agaagctggc
     1201 cgtgatattg ctcgagcttc ttctcgagcc gctcgaacaa tgtgaaggcg tccgcggtcg
     1261 cgccggcgaa accgccgatc acgctaccgt cctcgccgag gcgccggacc ttcttcgcgt
     1321 tgggcttgat caccgtgttg ccgaggctga cctggccgtc gccggcgatg acggtcttgc
     1381 cgcccttctt tactccgagg atcgtcgtgc cgtgatactg ttccatcgcc ggaatgtggg
     1441 tcagcagcgg agcaggcgca agcgggcgtc agtcgccgtt cgccgaaacg gccgactggg
     1501 ccttcaccca tttgatgagt tcgtcgagct ggatcgcctg ctcggtagcg atcagccggt
     1561 cggtgtcagg aagtctgtct tcaccggcgg tttcagcaac gctttcggtg gaagcgcgaa
     1621 gcccgggcac tggcgttgct ccgccagcgc ggggatcggc tgtggcggct gcggcttgcc
     1681 cgcgcaggcg ctgagcagaa gcacgagcag cggcaatgcg gctttcgaaa tcatgtgcgg
     1741 tcctttcgtt gattgcggtc tgctcggact tcacccgagc gaggttctcg gcatcttcgc
     1801 ggcgcgcccg atcggccgcg gcgcgaaagc cggcgacggt cgctgcgtgc gcggcttgct
     1861 cctggtgaaa gcgggcttcg ttggctcgcg cttcgtcgcg ccagcggtcg cggctctgga
     1921 cgagccacag gagtgccgcc gccgcggcgg cgattccgag gattcggtac agccagctcg
     1981 tcggcatcag tcgccctccg cttccacggt gacgccatcc cgggacgcgc tgcccttgaa
     2041 gcgcccgaca gggccgccga cgagcaggcc gacgatcacc gacgtcatcg cgacgatgaa
     2101 cccggccaat gcgccgccga agatgacgac gatcgtatgc tcctcggccg cgctccagcc
     2161 gccccacatc agcaggcaga ccatcgcgac cgagcacatg ccgcagaaga cgccggcggc
     2221 agctgctagc caaccgtaaa tctggcgctg gccctccgcg aacgtcgctg gcggtggaag
     2281 tgcttccatg tgattttcct cgcttaagtt cactaaagtc acgcgatgag tcgccttttt
     2341 gtgtgacttt aaggggcggc cgcctaaccg acgcggttcg cgagccatcc gtagaggaac
     2401 gcctcgttgg cgggccgccg ctcggcgagg cggaggtaac gctcgccctg gagcgcatcg
     2461 agcgccttga gaagcacctg ttccccgccg ctgcggccgc gaagctcgag gaacgtgtca
     2521 agcgcggcga gggtcgccgg tccgatccgc ccgtcgggaa ccaggtcggc ataatccttg
     2581 cggttgcgat tgagcgccga gagagcccgc tggaggaagg tcgcggcgac cgcggggccc
     2641 atgttggcga cggtgtcgaa cagctcggcg gcgattttcc gagaacgctt tgcgacctgg
     2701 tcaaagcgcg gtcgaagcca atagaggcgc ttgtatatcg ccgccgcctc cgcgcgcgga
     2761 agctcgcgca tcgccccgga atagccgtgg gcgcgggcca ccgcttcggt gatcccgtag
     2821 ttcgtcgctc cgccgcggtc gtccgggtga tttgtgaaac cgccctcgcg gtcgatcagt
     2881 gcgtcgatga gttcgtcgat atccattgcc tgcagccttt ccggtttccg agtcggctgc
     2941 gttgaaccaa attggttcta tgtaggaaag aactttttcc gaaaagcggt taatccagca
     3001 aggccatcac gcgctccgtc agggcggcgc agtcagctcc cgcgaatggg aaactgccct
     3061 gcagcgctcc tcttacctcc ggcgcaagcg cttgttgcag cttcgcccgg gcgcggtgga
     3121 gccgcgtctt cactgtcgcc ggccgaattt ccagcgcttc ggccgtttcc tcgatgctca
     3181 ggccctcgat ctcgcgaagg acgaacaccg accggaaacc gtcgggaagt tcggcgaccg
     3241 cctgctcgat caggatgcgc aactgttcgc gcgcgagcgc gacatcgggc gctggctcgt
     3301 ccgagccccg gccgagtttg tccctgtagg tgtcgagcaa tgccacgccc tcgctttcaa
     3361 gctgctcccg ccgtcgcact cgggcacgca tccgccccag cgattcattg accacgatcc
     3421 tggtcagcca agtgctcagc gacgatcggc cttcgaagcc cgagattgcg gagaaggcat
     3481 tcaggtagcc cgcctggacc gcttcctcgg cctcgccgcg gtccttcagg atgctccatg
     3541 cggccctgaa caatctctgg ttgctggcgg tgaccaggtg gcgctgcgcc tgccggtcgc
     3601 gcttcgcgca cagctgcgcc agagtaacgt cgtcgagcgc ggaataatcc gtctggggct
     3661 ggccggtcac ttggccaccc gtagcacgcc cttcattccc ggatggtatt tgcacaggaa
     3721 ggggaaggac ccagccctgg tgacccgcat cttcactgtc tttccggccg gcaggtcaac
     3781 gtcgaacgcg cccttcgccg ttacgctgtg cctgaatatg tcgcgattat cccagacaat
     3841 gatgtcgccc ttgcggaccc gcgccgggag gtcgccgaat tgcatcttgt cgaccactat
     3901 tgtgtaagtg cgtgggaccg ctgctgcagg ggctgaaact gacagcaggg cccacgcagc
     3961 ggcggcagcc acgggtgaat gccgccgcat cgtttagtcc ttgagctcgg cggcgaggtt
     4021 cacggcgtgc atctgatgct cgcggaacaa ggtcagtccg gtttcgagaa gcgatttcag
     4081 cttcccgttg tcggcggacg ggatcagcgt cgattcaagc gctccgttga cggttccgtg
     4141 gaacgcgatt tcgttggcga gataggcctt gtcgaatgcg gggccgtcga gcttcgccag
     4201 ccgcgcctcg gcttgtgcgg cggccttggc cagcgcttcg ctcgtgggat tatcctccgg
     4261 ggtcacgccg agttgcttga ccagcgacag cgccttgtcg ttcaccgctt cgtggtcgcg
     4321 gaccatctcg ctggcgaatt gccggaccgt ggcatttttc gatttggcga gcgcctgctt
     4381 ggccgcggcg acgtcgaggc tgcccgcggt ataggcaatg tgggcgatct gcgcgtcgct
     4441 gggcccttcg tcggccatcg caacgccgcc gatgccgagc gcggcagcaa gtaaaatcgc
     4501 gggtagtccg tagatcatcc aaacctccgt ctgcgagcgg cctgccatcg gacgcttcag
     4561 ccgattggat gacaccctgg aggaaaggtt cccgtacggc ccggcctatt tcccggccgc
     4621 cgacgcgagc tcgagtcagc gggaggcgaa ctcgcgtccg ccgaacatct gcggcatcgc
     4681 ctgggcgtcg aacccgtagc ggtccggccg aaacacgacc ccgttgccgc ggggggcgac
     4741 tgtgaaatag gtcatgtaga ccggaaacgg ctcgggaacc tcgaacctct gctcgcgcgg
     4801 ggtggtcgcc cggggaacac cgccgaagat ccacgtggcg aacctcttgt agtcctcaag
     4861 ccggacgcag ccgttgctga tccagcggtt ctccttcgcg aacaggtcct tttgcggcgt
     4921 gtcgtggaga tagatgccat agtcgttggg catctcgaac ttcatctcac ccatcgaatt
     4981 ccacggcccc ggaagctggc gaacgaggat cgtcggctgt ttcttgccgc tagcgatcgc
     5041 tttccagtcg acggtcttcg ggtcgaccag gcggccccgt ccgctccagt ccgacagcac
     5101 ttcgtaatga aagttcttga gataggagag cccatcctcc cggattcgcc gcgcggtgag
     5161 cgagcggatg agttcgggcg ggacgtgcca atagggattg gcgactgcgt cgcgcatgat
     5221 gacggccatc atcggagtct tggtcttcgg cgccccgacg atgacccgca tcgcgtccac
     5281 gacgcggtcg ttgtcgtaca aatagacttc ggcagcgcct gaatcgacca acacgtagcg
     5341 ggagaacttg ccggtcggcg gaagccggta ggcgcgctcc aggttgattg cgattcgccg
     5401 ggcgtaatgg acggcgccga ggttgagcga ggcgatggtg tccctgccgg cgatcccgtc
     5461 ggccgggtcg agcccgtgga ctcgctgata ggcggtcacc atctcgaaca gcctctggtc
     5521 gtagccgccg ccgggcggca gcccaagccg tgtccgcagc aagtcgaccc gctttccggt
     5581 cgagccgcgc ttgagcgccg cacccgccgg gatcttcacc tgcggaagcc gtccccagga
     5641 ggattgatac tgctgcaacc cctgggcgaa ggccgcgaac atcggatgcg gggcgttgcg
     5701 gcggtctccg aagagaccgt cgaggccgat cgtccgcaac agccagttag tcggccgctg
     5761 gtggcgcctt gcgacgctgt tgagctgcgg gtcgacatag acgaagtcga tgccctgctt
     5821 gacgttggcg gggacggcga tcggctcgtc gccgcgcggc tgggcagttg cggaaatcgg
     5881 cgctgcggcg gcaatcagcg ccgcggcgcc ggcgatcagg cgaatctttt tgtgcataat
     5941 tttgcgccgg gtccccgaca ctccagaatc caaactcgtt tgctcaacgc cgcaattatg
     6001 gaatggttcg agttgcactg gcctgaacgc gatgtttcga tcagcgtaag ccggcccggc
     6061 ggcgccgtct tgacttcaaa tttgtttcgg agcctcatcc gtttcggctg cgcgggggcg
     6121 ctgccgacct tggaggggac cagcaatggc gacaactgcc gaagggcgca cgcccgtaca
     6181 tttgtggatc gtcggaatcc ttgcgctgct gtggaacgcg atcggttgct acgactatgt
     6241 gatgacgcgc atgcgcgaca cggattatct cgcgaagatg atgcccggca ccgatcccaa
     6301 tgccgttctc agctacatcg acagctttcc ggtctgggcg caggccggat gggcgctcgg
     6361 cgtctgggga ggcctggtcg gcgcaatcct gcttctgatc cggagccgct actcggtctg
     6421 ggccttcgcg ctgtcgctga tcggggcggt tttgggcctt ggctaccaga ttgcgaatcc
     6481 cggcgggccg gccgagatgc acgagggtat cgggggactg atcccttatg tgatcatcgc
     6541 catcgccgca ttcctgctct ggtactcgtg gagccaggaa aagaagggcg tgctgcgctg
     6601 aaattaggcg ggcggcgcct accggcgccg cccgcgaact tgcctagagg acgaaatccc
     6661 cgctcgtcag cgtgtgcgcg ccgtcgaggc ggatcatgaa gtcggcgagg ctgtcgccgt
     6721 tggtgtcgcc gtagacgtag gtggtgccgc tgatctggtc gtagcgaagc tcgccggccg
     6781 tgcctgagaa ggcgccggtg ccgatgaagg cgaacgcctg gtcgtcggcg gccagcgtgt
     6841 tcgcgtccac acccgacaag cggatccggt cgccgtcggc ggagctgaag tccttgacct
     6901 ggtcgcaggt cgagctggtc attccggcga aatcgccgtc gttgaacacg aacgtgtcgg
     6961 cgccgctttc gccgaacagc acgtcgcggc cggcgccgcc ctcgagcagg tcgttgccag
     7021 cccggccgcg gagcgtgtcg tcgccggaaa ggccgtagag cttgttggct ccgccgttgc
     7081 cgctcaggac gttgtcgccg ccgttgccat aggcccacag gttcgcagag cccgtcatcg
     7141 tcagcttctc gacatgatcc ccgagcacgt aattggcgct cgcaaagacg gtgtcgatgc
     7201 cttcgccggc aagctcgatc gcgcgatcgt tgtaattgtc gacataataa gtgtcgtcgc
     7261 cgaggtcccc ccacatcttg tcggcgccgg cgccgccgtc gatgatgtcg ttgccgtcga
     7321 gggcgaacag cttgttgttg ccgctgttgc cggtcagcgc attgtcgagc tcgttgccat
     7381 aggcccagat gttggcgctt ccggtcagcg tgatgttttc gacattggcg tcgaggatcg
     7441 cattgtcgct ggcgaacacg ctgtcggtgc cctcgccgtc gctctcgatg atccggtcgg
     7501 aatagctgtc gacataataa atgtcgtcgc cgagccctcc gaacaggcgg tccgagcccg
     7561 ccccgccatc cagcgtgtcg ttgccatcga gcccgaacag cttgctgatg ccgctgttgc
     7621 cggtgaggat gttgtcggac gaattgccgt aggcgtagag gttgacggtg cccgtctggg
     7681 taagcttctc gacattctcg ccgaggatga aattggcgct cgcgaacacc gcgtcggtgc
     7741 cttcgccgga aacctcgatg acctcgtcgt aataatcgtc gacgtagaag acatcgtctc
     7801 cagctccgcc caccatttgg tcgcgtccgg taccgccgtc gagaatgtcg ttgccgcgcc
     7861 cgccgaacat ataatcgtta ccagcgccgc cattgaggac gtcgtcgccg cccgggccgt
     7921 cggagacatt gtcgtcgacg agggtctgga cgccgccgac catgatccac gtaccgtcgc
     7981 cgtagaggct gtcgttgccg cccccgccgt tcagcgtgtc gttgccgata tggcccagca
     8041 gcacgttggc gttggaatcg ccggtcaggt ggtcattgtg cgagaatccg ccgaggttct
     8101 cgatgttgct aagcgtccag tagccggtgc cgacccactg ggcagcgccc tgcagctcga
     8161 gcgaaacggt gatcccgccc gcgttctgat agacctgcgc ataggagaag tcggcgatct
     8221 cgatcgtgtc gattccatcg ccgccgtcga cgaccttgtc gtcggcgccg accgtgaaat
     8281 aatcgttgcc gccgttgccg gacaatgtgt cgaagccgct gaacgtccag aaccagttgg
     8341 cggcggcgtt accggtcagc gtgtcgttgc cgtagttcga cgtgatatgc tcgatgctga
     8401 cgagacggtc gttgccctgc ccggtattct gcgcggtggt gatgttgaga tcgatggtca
     8461 ggccatggag cccgtcggtg gtgaaatagc tgacgcggtc atagccgccc ccgccgctgt
     8521 agatgtcgtc cccgaacggg ccgccgtcac ccgaagcttc ggagagcagg tcgttgccgg
     8581 tgccgccgaa gagggtgtcg ttaccagtcc cgccgcggag cgtatcgtcg ccgccaagac
     8641 cgctgatggt atcgtcgccg ccgaagcctt caagcaggtc tgcaccctcg gtgccctcga
     8701 tcgtgtcgtc gccctcgctc gcaggaatgc tctcgcctcg caccaggatg ttcgatccgg
     8761 ccgcagtttc gaccagcgaa tactggccgt tcgacagcgt cagcacctgg tccgctacgg
     8821 cgtctccgtc ggtgtcggcc tcgacatagg tgtggccgtc gccgaccgag aagcgatatt
     8881 cgccggccac gccgctgaac gccgcgctgc cgatgaaggt gtcggcacgg gcgtagccga
     8941 ggctgacctc cacgtcgccg ttatggctga ggtcgatcac gtcgtcgaag tcgaagtcgg
     9001 tgatcgtgtc gccgttcatc ccggtgaccg cataggtata atcgaagatg tcggcgccgc
     9061 cgtttccggt gaagatgtcg ttcccctgga catggacgtc gatgttggcg aacccttcag
     9121 cgccagacga gccgatcatc acgtcggtcc cgttatggtc gatcatccac aggaaggttc
     9181 ccggctggct ggagtagctg ctggcgtcga tcgtaagggt cccgatgtcg ccccgtgtcc
     9241 agacctgcac caactcggaa ttgaagattc ggctggtcgc gaccccgccc tggctcacgg
     9301 tcatgtcggc ggtggatccg gtaatcgtga tcgtgtcgga gagcgtcagg tcggcgtcga
     9361 cctggatgac atcatagccg tcgccgccgt cgatggtgtc gttaccgaag cctgaggcga
     9421 tgaagtcgtc gcccgcgtcc ccgtggatca cgtcgtttcc gccgccgccc aaaagcgtgt
     9481 cgttgccgtc gccgccgtcg atggtgtcgt ttccggcgcg gcccccgagc acgtcgccgc
     9541 cgctgctgcc ctggaggcta tcgtccccgg aaagaatcgt ctggaagagt cccgcgaggt
     9601 cgtcgttcat gacgaaagcg gtgaaatcct cgacgctgat cgtcattcca gagacggtga
     9661 acagagtcac gccgtccagc gtgtacgaag cgctgctgac cgttcccgtc gtcgggaatc
     9721 cgttcgaatc gtaattctgg aagtcgccgg tgaggtgcag ctcctccgaa atcgtctcat
     9781 cggaataagt gaccaccagg tcggtggagc ttccgacctg gacttcgccc cattcgaaga
     9841 actccgaaag cgacccggtc gcgatcatgt cgttcatgtc gaatgcggaa cccgcgatca
     9901 aagtcgccat ttgaaaaccc ccaccatgcg gcgcgaagtg ccgctcttga attacggacg
     9961 gcagcgaggg cccatttgag cccggtcctc tgccgcaggc aaaagttcat gattgcaagg
    10021 gcttgtccat tacccaaatg ggatagattc aattttactt aacctacgat ggtgctaggg
    10081 attagcccgg gggcccgggt tgaaacacgc acttgcagtc gaggatatct acgaagcggc
    10141 attcgacgac gaatgcttcg ccggcttcgc ggcggcgctt gccagcgcct tcggtgttcg
    10201 ttcggcgctc gtccactggg ttcacaagga cggcgcagcg gaaatcctct cccattcggg
    10261 ctatttcacg gatgagcaac ttgccgatta cgcgcagaac ttcgtcgcga tggatccctg
    10321 gatcgaagcg gccgcgcgcg ccgggcaggt caattcggta atgaacctcg aagaactcgt
    10381 tcccgcggcc cggtttacca acaccgaatt ctacaacgaa tattttcgag cgatgggcga
    10441 cgatacctgc cgatgcctcg gcattcgtct cgaaaccgaa tccggggccg gctatctcgc
    10501 cctgcatcgg gggctgaccg aggacgcatt cgacgaatcg gtgacgagcc gcctcgccga
    10561 atatctgccg cacattcgcc gggtgctggc gattcgcagc aagatcagcg ccgcccagca
    10621 ccacgccgca ggcgtgtcgg cagcgttcga cgcaatcgga ctgccgatac tcctcgtcga
    10681 cgccaggctg cggatcaagc aggcgaatcc ggccgccgag gacttgcttc gggaggagtc
    10741 ggctttgcgg tgccggctcg gcacattgga ggccatgtcg ccggccgcga atgcgcttct
    10801 gcgcaacgcc gtcaacgccg cgctcgcgga tgaacagggt ccgcccgccg ccgttgccgt
    10861 tccagcgtca atgggcgcgc cgctttgcct ttcgatcgcg ccgaaagtct cgcgcgggca
    10921 gcgcctggct ctgatactcg ccagcgcccc cagccgggaa caggacgacc gcgcccatcg
    10981 cttgcggttg ctgttccggc tctcgcctag cgaagcgatg ctcgcggtca tgctggccga
    11041 tggccacagc cccgccgaaa ttgccgaagc tcggcaagtc tcggtcggca cggtgcggct
    11101 tcaaatcaag catatcgccg caaagctagg ctgcaaccgg cagagccaga tcgtgggcgt
    11161 cgtctccgcg cttccgccgc tcttcacgcc cgccggccgg agctgagtaa ctcgacgcgc
    11221 ccgcgccacg gctccgcatg tcggagcacg caatcctctc gctacgctac tcgctggcgg
    11281 tcggagccac cttccagcac tggtcgcgat gctaccgcgg caaggtgcag tagcaagaat
    11341 tgattgagtt aaagtcgcag ttatcctcgc cgcccgccga accgcgtccg cgactgcttg
    11401 ccgtagcgcc ctttgcgcgt ccccggcttg ccctcggtcg aatgtccgag cggacgcggg
    11461 gcgacccggt caggatcggg gattccgagc tcgtcctcct cgagcctgcg gatctcgtcg
    11521 cgcaggcgag ccgcttcctc gaactcgaga tcggcggcgg ccttgcgcat gcgctcttcg
    11581 aggtcggcga tataggcctt gaggttgtgc ccgacgaggt gcgggcgctc ctcgtcgccg
    11641 gtgtcgacca ccagcccttc gcgcgcggtc agatgcgcca tcacgtcgct gatctggcgc
    11701 ttgatgcttt cgggcgtgat gccgtgctcg cgattgtatt cgagctgctt ctcgcggcgg
    11761 cggctggtct cggcaagcgc ccgctcgatc gagccggtga tggtgtcggc atagaggatc
    11821 acgcgtccgt cgacgttgcg cgccgcccgc ccgatcgtct ggatcagcga tgtctcggag
    11881 cgcaggaagc cctccttgtc ggcgtcgagg atcgcgacca gcccgcattc gggaatgtcg
    11941 aggccttcgc ggagaaggtt gattccgacc agcacgtcat agacgccgag cctcagctcg
    12001 cggatcagct cgatccgctc cagggtctcg acatcggagt gcatgtagcg gaccttgagc
    12061 ccggcctcgt ggagatattc ggtcaggtcc tcggccatgc gcttggtcag cgtcgtgact
    12121 agcgtccgat agcccttgcg cgccgtttcc ttcgcctcgt ggatgaggtc gtcgacctgg
    12181 tcctcgaccg gcttgatctc gaccggcggg tcgatgaggc cggtcgggcg gatcacctgc
    12241 tcgctgaaca cgccgccggt cgcgttcatt tcccacggcc ccggcgtcgc tgagacaaaa
    12301 gtcgtctggg ggcgcattgc ttcccactca ttgaagcgca gtgggcggtt gtcgatgcag
    12361 ctcggcaggc gaaagccata ttcggcaagc gttatc
//
LOCUS       DATAKH010000038         2282 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35914,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000038 DATAKH010000000
VERSION     DATAKH010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35914"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..447
                     /locus_tag="VHN55_01450"
     CDS             67..447
                     /locus_tag="VHN55_01450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802637.1"
                     /translation="MLDKISGLARALYILLAIVAGFMVLGSLNTALVLVALGLVSGIG
                     MAKENYVPAAATAIALPIIGAALGTIPMVGAQLTAVAANLQLGVAGALASALAIALYH
                     FVMDGVTGMAGGGATAEVKAAPAR"
     gene            complement(518..970)
                     /locus_tag="VHN55_01455"
     CDS             complement(518..970)
                     /locus_tag="VHN55_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019367932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEX2802638.1"
                     /translation="MIRDDIKAATITAMKSGDKDSVGTLRLMSAAIKNRDIELRTSDK
                     APDDDALVTEVLQKMIKQRRESAEAYRGGGRSDRAEAEEAEIAVIERFLPKQMSEDEA
                     RAAVQAIIADTGASSIKDMGRVMAEVKQRHAGELEPARASALVKSALS"
     gene            1115..>2282
                     /gene="carA"
                     /locus_tag="VHN55_01460"
     CDS             1115..>2282
                     /gene="carA"
                     /locus_tag="VHN55_01460"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEX2802639.1"
                     /translation="MADAHPTRASQPTGATGVVVFADGRTIWGQGFGAEGEAVGELCF
                     NTAMTGYQEVMTDPSYARQVIAFTFPHIGNVGANDEDVEAVEAHALGCLVREAVTAPS
                     NYRAGEDFAGWMRKRGRIGIAGVDTRALTKLVREEGPPTVAVAHRADGEFNLDKLQQM
                     AADWPGLEGMDLAKEVSRLQVERWSGGKWQWGEGYELGGDDESRPHVVAVDYGSKRNI
                     FRNLCEAGARVTVVPATATFDEIMAHEPDGFFLSNGPGDPAATGEYAVPVIQEMLESG
                     KPLFGICLGHQMLALAVGGKTSKMFQGHRGANHPVKRLEDGCVEITSMNHGFAVEREG
                     LPENVRETHVSLFDDSNCGIELTDKPAFSVQYHPEASPGPQDSFYLFEKFVGMMR"
BASE COUNT          392 a          687 c          782 g          421 t
ORIGIN      
        1 atcgttgcgg ttccgaaaca gggtggcacc agccggcctg gcgggacaat tggaggggga
       61 tccacgatgt tggacaagat cagcggcctc gcccgcgctc tgtacatcct gctggcaatc
      121 gtcgcaggct tcatggttct gggatcactg aacaccgccc tggtgcttgt cgcgctggga
      181 cttgtctccg gtatcggcat ggcaaaggag aattacgtgc cggccgcggc aacggcgatc
      241 gcattgccga taatcggcgc tgctctgggc acgattccga tggtcggcgc gcaactgacg
      301 gcagtagccg ccaatctcca gctcggtgtt gccggcgcgc ttgcaagcgc actcgcaatc
      361 gccctgtacc acttcgtcat ggacggtgtg acgggaatgg ccggcggcgg agccacggca
      421 gaagtgaaag ccgcacccgc gagataggca tttcgtcgat gtgtttcggc tccgccgttt
      481 ctaagcggcg gagccgcgtt catttgaaag ttgcggtcta gctgagtgcc gacttcacca
      541 gagcgctcgc acgagcaggt tccagctcgc ccgcatggcg ctgcttcacc tcggccatta
      601 cccggcccat gtccttgatc gacgaagcgc cggtgtcggc gatgatcgcc tggacggcgg
      661 ctcgagcctc atcctcgctc atctgcttgg gcaggaatcg ctcgatgacg gcgatttcgg
      721 cttcctcggc ctcggcgcgg tcggagcggc cgccgccgcg gtaagcttcc gccgattcgc
      781 ggcgctgctt gatcatcttc tgaagtactt cggtgacgag tgcgtcgtcg tcgggcgcct
      841 tgtcggaggt gcgtagctcg atgtcgcggt tcttgatcgc cgcggacatg agccggagcg
      901 ttccgacgct gtccttgtcg ccgctcttca ttgccgtgat ggtggcagct ttgatgtcgt
      961 cgcgaatcat agttcgtccg ttcgtttggc gggaaacacc caagatagtg cggtttcgcg
     1021 caatttgcag cgttgacgcg agccgcggcg caccctagct gcgatgcctt agcgacatcg
     1081 ctgttcaacc gctcacggaa ggctcttcca gcccatggcc gacgcacatc ccacgcgcgc
     1141 ctcccaacca acgggcgcga cgggagtcgt tgttttcgcc gatggccgca cgatctgggg
     1201 gcagggcttc ggagccgagg gcgaagcggt cggcgagctg tgcttcaaca ccgcgatgac
     1261 cggataccag gaggtgatga ccgatccctc ctacgcacgc caggtgatcg ccttcacctt
     1321 cccgcacatc ggcaatgtcg gtgccaacga cgaggatgtg gaggcggtcg aggcgcatgc
     1381 gctcggctgc ctggtgcggg aggcggtaac ggctccgtcc aattaccggg cgggcgagga
     1441 ctttgcgggc tggatgcgca agcggggacg gatcgggatc gcgggcgtgg atacgcgggc
     1501 gctgacgaag ctggttcgcg aagaggggcc gccgacggtg gcggtggcgc accgggcgga
     1561 cggggagttc aatctcgaca agcttcagca aatggcagcc gattggcccg ggctcgaggg
     1621 catggacctg gccaaggagg tcagccggct ccaggtggag cgctggagcg gcgggaaatg
     1681 gcagtggggc gaaggttacg aactgggcgg ggacgatgag tcccgcccgc acgtcgtcgc
     1741 ggtggattac gggtcgaagc gcaacatctt ccgcaacctc tgcgaagccg gcgcgcgcgt
     1801 gactgtggtc cccgcgaccg cgaccttcga cgaaatcatg gcgcacgagc ctgacggctt
     1861 cttcctgtcc aacggtccgg gcgatccggc ggcgacgggc gaatatgcgg tgccggtgat
     1921 tcaggagatg ctggagagcg gcaagccttt gttcgggatc tgcctcggcc accagatgct
     1981 cgcgctggcg gtgggtggaa agaccagcaa gatgttccag ggccatcgag gcgccaatca
     2041 ccccgtcaag cggctggagg atggctgcgt cgagatcacc agcatgaacc acggcttcgc
     2101 ggtcgagcgc gaggggctgc cggagaatgt ccgcgagacc cacgtgagcc tgttcgacga
     2161 cagcaattgc gggatcgagc tgaccgacaa acccgcattc agcgtgcaat atcaccccga
     2221 ggccagcccc ggcccgcagg acagtttcta tctgttcgaa aagttcgtcg ggatgatgag
     2281 at
//
LOCUS       DATAKH010000039         9539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35922,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000039 DATAKH010000000
VERSION     DATAKH010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9539
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35922"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VHN55_01465"
     CDS             <1..332
                     /locus_tag="VHN55_01465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="YidC/Oxa1 family membrane protein insertase"
                     /protein_id="HEX2802640.1"
                     /translation="DLSAPDPLTPVNLFGLLDFTPPGFLHIGVLAILLGVTMWLQFKL
                     NPQQMDPTQQQIFALMPWVMMFILAPFAAGLLLYWVTSNILTIAQQWWLYRRFGLHLS
                     DTHPAHT"
     gene            332..970
                     /gene="yihA"
                     /locus_tag="VHN55_01470"
     CDS             332..970
                     /gene="yihA"
                     /locus_tag="VHN55_01470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010215984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HEX2802641.1"
                     /translation="MGDDPDLAEQARKLFAGPIEFLKSAPGLEFLPDPLFPEIAFAGR
                     SNVGKSSLLNALTNRKALARTSNTPGRTQELNFFDVGDPIRLRLVDMPGYGFADAPKD
                     MVKRWRFLVNDYLRGRAVLKRTLVLIDSRHGLKPVDREVMQMLDDAAVSYHLVLTKAD
                     KMKASALGRIYEGVAAEAARHPAAHPTVFTTSSDTGSGIADLRTAVLASAEA"
     gene            complement(997..1674)
                     /locus_tag="VHN55_01475"
     CDS             complement(997..1674)
                     /locus_tag="VHN55_01475"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2802642.1"
                     /translation="MAGWVRNWLGRSALARRLDLGRRAWMRAMRPFANELGIVELPAY
                     PLLAARHLANCDLYPLREDLLRAMPRSANVAELGVQHGDFSQKILDICGPEKLHLIDV
                     DLGHVVRSGRFASEIASGRVQLHEADSATTIESFPDGHFDFIYIDADHSYDGVRRDIA
                     AAHPKVAADGYLLFNDYTFWSSAECMPYGVIHAVNEFCLAENWEVTAFALGHLGYSDV
                     AIRRIRE"
     gene            1874..2545
                     /locus_tag="VHN55_01480"
     CDS             1874..2545
                     /locus_tag="VHN55_01480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2802643.1"
                     /translation="MKVIIGNRAYSSWSMRGWLACRQSGEEFEELVVPLYDDEWDRRR
                     DGSEFGPSRGKVPILWDGDCVVWDSLAIIEFLADRAGREKFWPDNEHARGMARSMAAE
                     MHSSFLNLRRELPMNVRRTYPPAELSDEVRDEINRILQLWAQARARFGGTGEFLFGNW
                     CAADIMYAPVVTRFITYGVQVPPFAAAYMKSVLSHPHVNDWIDKAQDEPWVIEEYETE
                     DAAAQ"
     gene            complement(2539..2991)
                     /locus_tag="VHN55_01485"
     CDS             complement(2539..2991)
                     /locus_tag="VHN55_01485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013834285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2802644.1"
                     /translation="MPKLDLESIEQTNGTGYPPPYDKPVAGRWYRRLAPAGGLTDIGA
                     SHCVLEPGAWSSQRHWHEGIDEFVVMLEGEAVLIEDDGETVLRAGDCAAFPKDVANGH
                     HLVNRSERRCAFLAFDSRYGEGDCHYPDADLRYDAGHDRYTRKNGTPY"
     gene            3041..4171
                     /gene="dapE"
                     /locus_tag="VHN55_01490"
     CDS             3041..4171
                     /gene="dapE"
                     /locus_tag="VHN55_01490"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019832482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEX2802645.1"
                     /translation="MIASIDPVELARELIRCPSVTPARGEVFDVLAAALERLGFTVHR
                     WVMGEPPDGPTENMVAIRGEGSPHFGFAGHLDVVPAGDDWSFGPFEAVIENGVLIGRG
                     ANDMKSAIAAFVAAVAQVEQKQGTLSFLITGDEEGYSTYGTPRIIDWLEERGIRPDMI
                     LIGEPTSVDRLGDTVKIGRRGSVNMWIDVPGVQGHVAYPQRTENPIPPLARIIAELEE
                     LHLDDGTDAFPPSNLEFTGIDTPTHASNVIPGSATAQLNIRFNNLHSGAELVRKVEEI
                     AAKHSPGAKVRSRISGEAFLTPPGPLYDLVVNAIREETGLETELSTSGGTSDGRFLIK
                     LCSVVDFGLPNATMHQVGERAAVEDVQALSKIYRRIVAELVG"
     gene            complement(4168..5853)
                     /locus_tag="VHN55_01495"
     CDS             complement(4168..5853)
                     /locus_tag="VHN55_01495"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2802646.1"
                     /translation="MQAGTAQKVSNAILSGAAGLASFIFSLSALLYITALNEKIVAAL
                     VAGAFCLLISYIASERPNSESARALAALGDRLLAVEDGDLVSPAPPIVRDTMPKVAAA
                     VDTLFAEVRASIENAHALGMYDPVTSLPNRLHFRSEADKLLGEAPKGARSAMLFVDLD
                     RFKSVNDSLGHARGDQLLIMVANRLRVVVTAELSDSISRRPLLARLAGDEFTIFFPQV
                     DRVDDVERVARRIALAVAEPFELSGHSVDIGASIGVSVSPDHGTSVESLMRAADIAMY
                     RAKSRGGAQHCLFNDDLAAEHRQKIATEKALTEAVQHGEFQLALQPQLSLVTGEIVGA
                     EALLRWNHPREGLRMPATFIPVAERTGLVAEIGEWVIGEVALVLGTWHREGFIHRLSF
                     NVSPRQLDRIDFFVRLRQAFVDHNVPLSMIELEFTESAAMEVSDAVLGEIAALREDGA
                     RIAIDDFGTGYSNLARLRTMPLDRVKLDPSLIADIETCDKARVIVQAVVQLIKGVGCE
                     IVAEAVENSAQADILRAMGCDTVQGYAFGEPMFEPQYRAWVGRAGGGASQSVA"
     gene            complement(5916..6191)
                     /locus_tag="VHN55_01500"
     CDS             complement(5916..6191)
                     /locus_tag="VHN55_01500"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEX2802647.1"
                     /translation="MNLDRAWVAIDRGLERAIADGDRVLLLVTGHERAGDPPVRRGKI
                     RAAVHDWLSASRHASHIAAVRGAHRRHGGGGSLYIILRRNRTNSTIS"
     gene            6099..6311
                     /locus_tag="VHN55_01505"
     CDS             6099..6311
                     /locus_tag="VHN55_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802648.1"
                     /translation="MSRDEQQDPVAVCNRSFQPAVDRNPGAIEVQPVKVENPVGLDAS
                     RAQAPVPTGIERRAWAVLPLGGGCRR"
     gene            complement(6451..7587)
                     /locus_tag="VHN55_01510"
     CDS             complement(6451..7587)
                     /locus_tag="VHN55_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019832479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEX2802649.1"
                     /translation="MLSACVSRPVQPPPTQPPPVQPQPPVKPPPPPPPANAIAAGISL
                     SAPAILNEADAAEALSAFRISCGSVVKRNDKSGLTTPADWAPVCTQAASVPPGGASAF
                     FQTAFDWVRIGDGKAFATGYFEPEIAASPVPLPGYVPIHATPADLTRCALPDGKTGRG
                     RIDETGQCVYYFTRAEIEAGALASRASVIAWAADPIELFFLHIQGSGRLRFPDGRVVR
                     IGYDNQNGREYVAIGRLLRERGILPPGGASMESIVAWMRANPEQGRELMRANPSYIFF
                     KVLTGPGPLGAMGLPVTPRATVASDPNFIPLGAPVWLGLDRREAWGLWVAQDTGGAIK
                     GANRVDTFWGAGEEARRLAGGMSANGQALVLIPRGAAARAIARR"
     gene            complement(7626..8279)
                     /locus_tag="VHN55_01515"
     CDS             complement(7626..8279)
                     /locus_tag="VHN55_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013845983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44/TimA family putative adaptor protein"
                     /protein_id="HEX2802650.1"
                     /translation="MTVIIILALVALFIGLRLYSVLGERTGHEQQPILKPADPDARVE
                     RPAAPAAPAAKATPDPADLAYLPTAGPGVRALLAADPAFDVAQFLEGAQAAYRMILEA
                     FWSGELDKLRPHVDDNVYKAFASSVEQRTKEGLILDNRVVAIEQAVISAASLEQTVAF
                     VTVRFEADIAAVTRNKDGEVVAGSMSDAVQTRDLWTFRRDIASSDPNWLLVETDEEE"
     gene            8455..8994
                     /gene="secB"
                     /locus_tag="VHN55_01520"
     CDS             8455..8994
                     /gene="secB"
                     /locus_tag="VHN55_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014074370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEX2802651.1"
                     /translation="MAEEDTTRAGNGSDGNGSEPQAATLAQYIKDLSVESPGAPQVFQ
                     WKDQPSLDVGFNLNVEKVSDDVHEVVLKIEVKAQSNDGIHFLVDLAFAGLFGLRNFPE
                     EALAPFLLIEAPRLLFPFARQIICESVQNMGFAPLLLEPIDFGAAYLAQMQQAQQQGE
                     GAAIGDASDKPAEDGPSKG"
     gene            9025..>9539
                     /locus_tag="VHN55_01525"
     CDS             9025..>9539
                     /locus_tag="VHN55_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HEX2802652.1"
                     /translation="MNLIKAGGTIGGLTLVSRILGFAREMIFARVMGAGMAADAFALA
                     FLIPNLFRRLFGEGAFSQGFVPLFARRLDGEGGLDEARKFAEEVQAVFVPILIVITAL
                     FMIAMPAFVGLIASGWRDDPEKFSLAVDLTRITFPYLIFISLVSLFSGILNSLTRFTA
                     AAFAPALLNLAL"
BASE COUNT         1669 a         3099 c         3090 g         1681 t
ORIGIN      
        1 aggacctgtc ggcgcccgac ccgctgaccc cggtcaacct cttcgggctt ctcgatttca
       61 cgccccccgg atttctccac atcggagtcc tcgcgatcct gctgggagtt acgatgtggc
      121 ttcagttcaa gctcaacccg cagcagatgg acccgacgca gcagcagatt ttcgcgctga
      181 tgccttgggt gatgatgttc atcctggcgc ccttcgcggc gggcctgctg ctttactggg
      241 tcacttcgaa catcctcacc atcgcccagc aatggtggct gtaccggcgt ttcgggctcc
      301 acctgtccga cacccacccg gcgcacacct gatgggcgac gatccggacc tggccgagca
      361 ggcccgaaag ctgtttgccg ggccgatcga gtttctgaag tcggccccgg gcctcgaatt
      421 cctgcccgac ccgctgttcc cggagatcgc cttcgccggc cgatccaacg tcggcaagag
      481 ctcgctgctg aacgcgctta ccaaccgcaa ggcactggcg cggacgtcga acacgccggg
      541 ccggacccag gagctgaatt tcttcgacgt cggcgatccc atccggcttc ggctggtcga
      601 catgcccgga tacggcttcg ccgacgcccc gaaggatatg gtcaagcgct ggcgtttcct
      661 ggtgaacgac tatcttcgcg gtcgcgcggt gctgaagcgc acgctcgtcc tcatcgactc
      721 gcgccacggc ctcaagcctg tcgatcgcga ggtcatgcag atgctcgacg atgccgccgt
      781 gagctaccat ctcgtcctca ccaaagccga caagatgaaa gcgtcggcac ttggccgcat
      841 ttacgaaggg gtcgcagccg aagccgcgcg ccatccggca gcgcatccga cggtcttcac
      901 gacctccagc gacacaggaa gcggcattgc cgacttgcga acggcagtgc tggcaagcgc
      961 ggaagcctga ttgccgcgca gccgggctag ccggatttat tcgcgaatcc gcctgatcgc
     1021 cacgtcgctg tagcccaggt gacccaaagc gaaggcggtg acttcccaat tctcggcgag
     1081 gcagaattca ttgaccgcgt gaatgacgcc gtaaggcatg cattcggccg aggaccagaa
     1141 tgtgtaatcg ttgaacaaca ggtacccgtc cgccgcgact ttcggatgcg cggccgcgat
     1201 atcgcgccgg accccgtcat agctgtgatc cgcgtcgatg tagatgaagt cgaaatggcc
     1261 atccgggaag gattcgatcg tcgttgcgga atcggcctcg tggagctgga ctcggccgct
     1321 cgcgatctcg ctcgcgaacc ttcctgatct aacgacgtgg cccaggtcga catcgatcag
     1381 gtgaagcttt tcgggaccgc aaatatcgag aattttttgc gaaaaatccc cgtgctggac
     1441 tcccagttcg gcgacgttgg ccgaccgcgg catcgctcgc aataggtcct ctctcagcgg
     1501 ataaagatcg caattcgcaa ggtgccgcgc cgcgagtagc ggataagcgg gcagctcgac
     1561 gatgcccagt tcgttcgcaa acggccgcat ggcgcgcatc caggcgcggc ggccaaggtc
     1621 gagccgccgg gccagcgcgc ttcgaccgag ccaattgcgg acccagccag ccatctgcgc
     1681 gggccctctg cgttgtcgag gctggtgttt gcgcgccacc ggcggtggat ggactcgcgc
     1741 ccccaggttg gcaaggcgac ggcgcgacgg gtccgccgac gattccggat ccggtgacca
     1801 gacgaagccc gttgatgctc gacttgggac gggcgaatgc ctagggcctc ggccattgcg
     1861 aaggaaggcg tcaatgaagg tcatcatcgg caaccgggct tattccagct ggtcgatgcg
     1921 gggctggctt gcgtgccggc aatcgggcga ggagttcgag gagctcgtcg tcccgctcta
     1981 cgacgatgaa tgggaccgcc gccgcgacgg cagcgagttc ggtccgtcgc ggggaaaggt
     2041 gccgattctt tgggacggcg attgcgtggt gtgggacagc cttgcaatca tcgagttcct
     2101 ggcggaccgc gcagggcgag aaaaattctg gcccgacaac gagcacgcgc ggggaatggc
     2161 gcggtcgatg gccgccgaaa tgcattccag cttcctcaac cttcgccgcg aattgccgat
     2221 gaacgtccgc cgcacctatc cgccggcgga gctttccgac gaagtccgcg acgagatcaa
     2281 ccggatcctc cagctctggg cgcaggcgcg ggcgcggttc ggaggaacag gcgaattcct
     2341 gttcggcaac tggtgtgcag cagacattat gtatgcgcct gtcgtcaccc gcttcatcac
     2401 ctacggagtg caggtcccgc cgttcgcggc tgcatatatg aagtcggttc tctcccaccc
     2461 ccacgtcaac gactggatcg acaaggcaca ggacgagccg tgggtcatcg aagagtatga
     2521 gaccgaggac gccgcggctc agtaaggcgt gccgttcttg cgcgtatagc ggtcgtgccc
     2581 agcatcgtac ctcaaatccg cgtctgggta gtgacagtcg ccctcgccgt accggctgtc
     2641 gaatgcgagg aacgcgcatc gccgctcgct tcgattaacg agatgatggc cgttcgcgac
     2701 gtctttggga aaggcggcgc aatcgccggc gcgtagcacc gtctcaccgt cgtcctcgat
     2761 gaggacggct tcgccctcga gcatcacgac gaactcatcg attccttcat gccagtggcg
     2821 ctggctcgac caggcacccg gctccagcac gcaatgactt gcgccgatgt cggtcagccc
     2881 gcccgcgggc gcgaggcggc ggtaccagcg gcccgcgacc ggcttgtcgt agggcggcgg
     2941 atagccggtg ccgttggtct gctcgatcga ttctaggtcc agcttcggca ttcgctctcg
     3001 tcccctgtgc aatatgccgg ccggttgcta gtcgctccca atgatcgctt caatcgaccc
     3061 agtggagctc gcccgcgagc tgatccgctg cccgagtgtc acgccggccc gcggcgaggt
     3121 tttcgatgtc ctcgcagccg cgctcgagag gctcggcttc accgtccatc gctgggtgat
     3181 gggcgagccg cctgacggcc cgactgaaaa catggttgca atccggggcg aaggatctcc
     3241 gcactttggc tttgccggcc atctcgacgt ggttccggcc ggcgacgact ggagcttcgg
     3301 tcctttcgaa gcggtcatag agaacggcgt gctgatcggc cgcggcgcca atgacatgaa
     3361 gagcgccatc gccgcttttg tcgcggccgt cgcgcaggtc gagcagaagc agggcaccct
     3421 ctccttcctg attaccggcg acgaggaggg ctattccacc tacgggaccc cgcgaatcat
     3481 cgactggctg gaagagcgcg ggatccgacc cgacatgatc ctcatcggcg agccgacctc
     3541 cgtcgaccgc ctcggcgaca ctgtgaagat cggccgccgc ggatcggtga acatgtggat
     3601 cgacgttccg ggcgtgcagg gccacgtcgc ctaccctcaa cggaccgaga acccgatccc
     3661 gccactggcg aggatcatcg ccgagctcga agagcttcat ctcgacgacg gcaccgatgc
     3721 atttccgccg tcaaacctcg aattcaccgg gatcgacacg ccaacccacg ccagcaacgt
     3781 catcccgggc tcggcgacgg cgcagctcaa catccgcttc aacaatttgc acagcggggc
     3841 cgagctggtg cgcaaggtcg aagagatcgc cgccaagcac tcgcccggcg ccaaggtccg
     3901 ctcgcgaatc tccggcgagg cgttcctgac cccgcccggg cctctctatg acctcgtcgt
     3961 caacgccatc cgcgaagaga ccgggctgga aaccgagctt tcgacaagcg gcgggacgtc
     4021 cgacggacgg ttcctgatca agctctgctc ggtggtcgac ttcggcctgc ccaacgcgac
     4081 catgcaccag gtgggcgaac gcgccgcggt cgaggatgta caggctttgt cgaagatcta
     4141 caggcggatc gtggccgagc tggtcggcta agcaaccgac tggctggcgc cgccgccggc
     4201 gcggccgacc caggcccggt actgcggctc gaacatcggc tcgccgaagg cgtagccctg
     4261 gacggtatcg caacccatcg ctcgcaggat gtcggcctgg gcgctgttct ccacggcttc
     4321 ggcgacgatt tcgcagccga cgcccttgat cagctggacg acggcctgga cgatcacccg
     4381 cgccttgtcg caagtttcga tgtcagcgat cagcgacgga tcgagcttga ccctgtcgag
     4441 cggcatcgtt cgaagcctcg ccaggttgga atatcccgtc ccaaaatcgt cgatcgcgat
     4501 tctcgcgcca tcctcgcgaa gcgccgcgat ctcaccgagg accgcgtcgc tgacctccat
     4561 cgccgcgctc tcggtgaatt ccagctcgat catcgacagc ggcacattgt gatcgacgaa
     4621 cgcctggcga agacggacga agaagtcgat ccggtccaac tggcgcgggc tgacgttgaa
     4681 ggacaatcga tggatgaacc cttcgcggtg ccaggtcccg agcaccaggg cgacttcgcc
     4741 gatgacccac tcgccaatct cggcgaccag gcccgttcgc tcggcgaccg ggatgaacgt
     4801 ggccggcatt cgcaagcctt cacgcgggtg attccagcgc aggagcgctt cggctccgac
     4861 gatttcgccc gtcacgaggc tgagctgtgg ctggagcgca agctggaact cgccgtgttg
     4921 gactgcttcg gtcagcgcct tttcagtcgc gatcttctgc cggtgctcgg cggcgagatc
     4981 gtcgttgaaa aggcaatgct gggcgccgcc acgggacttt gcgcggtaca ttgcgatatc
     5041 cgccgcgcgc atcagcgatt cgacgctggt gccatggtcg gggctgaccg aaacgccgat
     5101 cgatgcgccg atgtcgacgc tgtgaccgga cagctcgaaa ggctcggcaa cggcaagcgc
     5161 gatccgccgg gccacccgct caacgtcatc gactcgatcg acctgcggga agaagatcgt
     5221 aaattcgtcg cccgcgaggc gcgccagtag aggccggcgc gagatgctgt cgctcagctc
     5281 ggcggtcacg acgacccgaa ggcggttggc gaccatgatc aggagttggt cgccgcgggc
     5341 gtggccaagg ctgtcgttga cgctcttgaa gcggtcgagg tcgacgaaca acattgccga
     5401 cctcgctcct tttggcgctt ctccgaggag cttgtcagcc tcggagcgga aatgaagccg
     5461 gttgggcagc gaagtcacgg ggtcgtacat gcccagcgcg tgcgcatttt cgatcgaggc
     5521 ccggacttcg gcaaacagcg tgtccacggc ggccgcgacc ttgggcatcg tatcgcggac
     5581 gatcggaggc gctggagaaa caagatctcc gtcttcgacg gcgagcagcc ggtcgccgag
     5641 cgcggcaagg gcgcgtgcgc tttcgctatt tggccgttcg gaggctatgt agctgataag
     5701 caggcagaat gcgcctgcga cgagcgcggc gacgatcttc tcgttcagcg cggtgatata
     5761 gagcagcgcg cttagcgaaa agatgaagga ggccaggcca gctgcgccgg agaggatggc
     5821 gttgctgacc ttctgggcag tgcctgcttg cattcccgat tgcgccctgt ctgatggcct
     5881 gatccggctc catcgtcagg gttaaattgt cagggttaag aaatggtgga gttggtgcgg
     5941 ttgcgccgca aaataatgta aaggctcccg cccccgccgt ggcgccgatg cgcgccccga
     6001 accgcggcaa tgtgcgaggc atgtctcgac gccgacagcc agtcgtgaac ggccgccctt
     6061 atcttgcccc ttcgcaccgg cggatcgccc gccctttcat gtcccgtgac gagcaacaag
     6121 acccggtcgc cgtctgcaat cgctcgttcc agcccgcggt cgatcgcaac ccaggcgcga
     6181 tcgaggttca gcccgtgaag gtcgagaatc cggtcgggct cgacgcttcc cgagcgcagg
     6241 cgccggtccc aactggaatc gagcgtcgtg cttgggcggt cctgccgctt ggcggcggat
     6301 gccggcggtg acggctggcg agatgcgcgg gacgggcggg gatgcggtac ctccggccgc
     6361 ggcgattcag ctaccgccga gctgggttga aagggtttcc gggacagtgg gcggatagtc
     6421 gcggcgacgc gctcccacag cgccttttcg tcagcgtcga gcgatcgcac gcgcggcagc
     6481 gcccctcggg ataaggacga gagcctgccc gttggcagac attcctccgg ctagccgccg
     6541 cgcttcctcg ccggcgcccc agaacgtatc gacgcggttg gcgcccttga tcgctccccc
     6601 tgtgtcctgg gcaacccaca gcccccacgc ttcgcggcgg tcgaggccga gccagaccgg
     6661 cgctcccagc gggatgaagt tcggatccga agccacggtc gcgcgcggcg ttaccgggag
     6721 tcccatggct ccgagcggac cgggtccggt cagcaccttg aagaagatgt aggacgggtt
     6781 ggctcgcatc agctcccgcc cctgctcggg attggcccgc atccaggcga cgatcgactc
     6841 catgcttgcg ccgcccggcg gcagaattcc acgctcgcga aggagccggc cgattgcgac
     6901 atattcgcgg ccgttctggt tgtcgtagcc gatccggaca acgcgcccgt cggggaagcg
     6961 aagccggccg gagccctgga tgtgaaggaa gaacagttcg atcgggtcgg ccgcccaggc
     7021 gattaccgac gctcgcgacg cgagcgctcc tgcctcgatc tcggcccggg tgaaataata
     7081 gacgcactgg ccggtttcat cgatgcggcc acgaccggtc ttcccgtccg gaagggcgca
     7141 gcgagtgagg tcggccggag tcgcgtggat cggcacataa cccggaagcg ggacggggga
     7201 cgcggcaatc tcgggctcga aatagccagt cgcgaacgcc tttccgtcgc caatccgaac
     7261 ccaatcgaaa gcggtctgga aaaaggccga cgcaccgccc ggcgggacgg aggcggcctg
     7321 ggtgcaaacc ggcgcccagt cggcgggggt ggtcagcccc gacttgtcgt tgcgcttcac
     7381 gaccgaaccg cagctgatac ggaacgcgga gagagcctcc gcggcgtcgg cttcgttgag
     7441 gatcgcgggc gcggaaaggc tgattccggc tgctatcgca ttggcgggcg gcggcggcgg
     7501 aggcggcttg acgggcggtt gaggctggac cggcggcggc tgagtcgggg gaggctggac
     7561 gggcctgctg acgcaggcgg aaagcaacag tgcggacgtg aggactaagc cccttagcca
     7621 ggccttcact cttcctcgtc ggtctcgaca agaagccagt tcggatcgct cgacgcgatg
     7681 tcgcgccgaa acgtccacag gtcgcgcgtt tgaacggcat cgctcatcga cccggcgacg
     7741 acctcgccgt ccttgttgcg ggtgaccgcc gcgatgtccg cctcgaacct gaccgtgacg
     7801 aaagccaccg tttgctcaag cgaagctgcc gaaatgacgg cctgctcgat ggccacgacg
     7861 cggttgtcca ggatcaggcc ttccttggtg cgctgctcga cggacgatgc gaacgccttg
     7921 tagacattgt cgtcgacgtg cggccgaagc ttgtcgagtt cgccgctcca gaaagcttcg
     7981 agaatcatcc gataggccgc ctgcgcgccc tcgaggaatt gtgcgacatc gaatgcgggg
     8041 tcggcggcga ggagcgcccg gacgccgggc ccggccgtcg gcaggtaggc gaggtcggcg
     8101 ggatcggggg tcgcctttgc ggccggagcg gcaggcgccg ccggacgctc gactcgcgcg
     8161 tcggggtcgg caggcttcag gataggctgc tgctcgtggc cggtccgctc gcccagcacg
     8221 ctgtagagcc gcaggccgat gaatagcgcc actagcgcga ggatgatgat gacagtcaaa
     8281 ttgtgcaatc caagagcaat tccagacgaa cataatgcgc ggccgacgga gattcaaagg
     8341 cccgtccgcc ggttggccgc cattgcacgg catttggccg actgctaggc gccaattcaa
     8401 taacgcgccc ggctttctcc gggtccgcat cacccgagtt cgagcgagat tggaatggct
     8461 gaagaggata ctacccgcgc gggcaacggc tccgacggca atggcagtga gccgcaggca
     8521 gcgactctcg cgcaatatat caaggacctg tcggtcgaga gccccggcgc tccccaggtg
     8581 ttccagtgga aggaccagcc gagcctcgac gtcggcttca acctcaacgt cgagaaggtc
     8641 tccgacgacg ttcacgaagt ggtgctcaag atcgaggtca aggcgcagtc gaacgacggg
     8701 atccatttcc tcgtcgacct cgccttcgcc gggctgttcg gcctgcgcaa cttcccggaa
     8761 gaagcgctcg caccgttcct cctgatcgaa gcaccgcggc tgctgttccc gttcgcccgc
     8821 cagatcatct gtgagtcggt ccagaacatg ggattcgccc ctctccttct cgagccgatc
     8881 gatttcggag ctgcttatct tgcccagatg cagcaggcgc agcagcaggg tgaaggcgcc
     8941 gccatcggcg atgcatcgga caagccggcc gaggatggtc ccagcaaggg ctgatcggcc
     9001 gcacgccgaa gcgggtttgc gcgcatgaac ctgatcaagg ccggcggcac catcggcgga
     9061 ctgacgctgg tcagccgcat cctgggcttc gcccgcgaaa tgatcttcgc ccgggtgatg
     9121 ggtgcgggca tggccgccga cgctttcgcg cttgccttcc tgatccccaa cctgttccgc
     9181 cggctgttcg gtgaaggtgc gttcagccag ggctttgtcc cgctgttcgc tcgccgcctc
     9241 gatggcgaag gcggcctgga tgaagccagg aagttcgccg aagaggtcca ggccgttttc
     9301 gtgccgatcc tcatcgtcat caccgccctc ttcatgatcg cgatgccggc cttcgtcgga
     9361 ctcatcgcgt cggggtggcg cgacgacccc gagaagttct cgctggcggt cgacctcacg
     9421 cggatcactt tcccctacct gatcttcatc agcctggtgt cgctgttcag cggaatcctc
     9481 aactcgctga cccgtttcac cgctgccgcc ttcgcgcccg cgctgctcaa cttggcgct
//
LOCUS       DATAKH010000040         9088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_928,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000040 DATAKH010000000
VERSION     DATAKH010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9088
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VHN55_01530"
     CDS             <1..524
                     /locus_tag="VHN55_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2802653.1"
                     /translation="LDIIGRGQFLASIFLIGGTAGVFAGGWFADRLGQGDRSWYAKLP
                     AIAWLITAPMFVVGLMAPSLWIAWPLLLIPNALNILWLGPVTTAVQHLVERPLRATAS
                     ASFLLINNLIGLGVGPTLIGGLSDLFKARFGTEALRYATVSVVGFYLLAALLMFFAVS
                     RLRKGWVEDSPQA"
     gene            654..1847
                     /locus_tag="VHN55_01535"
     CDS             654..1847
                     /locus_tag="VHN55_01535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802654.1"
                     /translation="MTRLILAAGVAALAITAPATAGPDKNRGAKSAHVQKERGAKSGK
                     HFAQQDKARGKRAEKAQKVRKQSAERRQKADGQRAKEQRKVAERRFKAQDKTRERRDD
                     RLERIADRRDVVRVREIDRRDRDGRRFAADAKGYGIGGCPPGLAKKPVRCMPPGQAKN
                     LVGERVRVLGDRVSLRDIPNRLRSVYRDTPDYYYRYGDGYMYRVNRSNDVVSSLLPLF
                     GLGMTAGQVFPTSYNSYGLPMAYQPFYPAMANNNYRYANGYIYEVNPYTGLIEDVDPM
                     LGYGYGYGQMLPATYSAYNVPYQYRPLYYDTPNAYYRYAPGAIYQVDPSTSLITAIAS
                     LLSPGLTVGQPLPAGYGAYNVPYAYRTQYYDTPDAMYRYANGSIYRVDPATQLVTALV
                     VSALT"
     gene            1914..2522
                     /locus_tag="VHN55_01540"
     CDS             1914..2522
                     /locus_tag="VHN55_01540"
                     /inference="COORDINATES: protein motif:HMM:NF014522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HEX2802655.1"
                     /translation="MRMLKTLPLCLCAATLALAACGQSGSENAAPDQSGEAKEAAGDQ
                     TIAASVDQNGRFFQAAKAVGLDATLAGPGPYTVLVPSDDAFGKVEGDAISNPADPANR
                     AQITRILTYHILPGVILADDISKAIDNGDGGKAALATMGGETLTATKDGSNIVLTGAD
                     GSKATIAKADIKASNGVIHDIDGVLAPPAGASAGGGEQQPAQ"
     gene            2615..3718
                     /gene="dnaN"
                     /locus_tag="VHN55_01545"
     CDS             2615..3718
                     /gene="dnaN"
                     /locus_tag="VHN55_01545"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020819146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEX2802656.1"
                     /translation="MKATIERATLLKALAHVQSVVERRNTIPILSNVLIEARDDNSMR
                     MMATDLDLQVDESVPANVEQAGATTVPAHTLFDIVRKLPEGSQVELNVAEGKMHLSAG
                     RSRFHLSTLPRDDFPVISEGELPTSFELPAATLRQIIDKTRFAISSEETRYYLMGIFL
                     HLADDQLKAAATDGHRLARVVLPKPDGADGMPDIIVPRKCVAELRKLLEEVEGTVEVS
                     LSPTKIRFGLGSAVLTSKLIDGTFPDYNRVIPTANDKLLKLDPKTFSSGVDRVSTIAS
                     EKTRAVKMSLDRDKVTLSVTSPESGTATEELPADYGADTLEIGFNARYLLDILGEIEG
                     DTVEVHLADAAAPTLLRENDKSNALYVLMPMRV"
     gene            3718..4035
                     /locus_tag="VHN55_01550"
     CDS             3718..4035
                     /locus_tag="VHN55_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802657.1"
                     /translation="MICRVWRGWTTPENADAYQRIVHQDVIPAIEARQIPGFRHIDLM
                     RRELGDEVEFQTLMWFDSLDSIKAFVGEDYSVSHVPEAARAVLKRFDERATHYEVIDR
                     REQ"
     gene            4051..5109
                     /gene="recF"
                     /locus_tag="VHN55_01555"
     CDS             4051..5109
                     /gene="recF"
                     /locus_tag="VHN55_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019367651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEX2802658.1"
                     /translation="MHVSRLALTDFRSYADALIEPRPGFVLLHGENGAGKTNLLEAVS
                     LLSPGRGLRGAALSDMARQAGQGAFAVAARFGEIDIGTGTTTASPERRQVRINGAPAS
                     ANSLGEWLSVLWLTPAMDRLFTGPAGERRRFLDRLVLALEPGHARHAARYEAAMRSRN
                     KLLSEPQGADASWLEALEAQMAEHGAAIADARARTVAALGERTSEAPDDQFARAALAL
                     DGWAGGDLAAELRDSRTRDAAVGRTLVGPHRQDLTVTHRAKAMPAAQSSTGEQKALLL
                     GLVLAHAELVADKRGQPPLLLLDEVAAHLDPKRRAALFARLEGRGQVWMTATEAALFD
                     GIGAASRFHVEPGLVEQG"
     gene            5295..5978
                     /locus_tag="VHN55_01560"
     CDS             5295..5978
                     /locus_tag="VHN55_01560"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HEX2802659.1"
                     /translation="MDRRKVAGGVLVVLVVVVVAGGLLSPARDWFSIDNLRHSRDWLA
                     ELVHARPYLWGSAFFALCVVATALCFPAAPVLGVTGGALFGFWPGLVIVTVASSIGST
                     IAFFDSRYLFRDWVKRKLGRRMEAIDQGVEKHGALYLLILRLNPLVPYWLVNLAMGLT
                     VMRPATYVPLTVAGLAPATFIYVQTGTSISTLGSGSESASVPLLVALFLISAVPVYLK
                     LLARFEPQA"
     gene            6182..7483
                     /locus_tag="VHN55_01565"
     CDS             6182..7483
                     /locus_tag="VHN55_01565"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010406853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX2802660.1"
                     /translation="MSFMSLGLSKPLLDALAAKDYSKATPIQLQAIPTVLSGRDLLGI
                     AQTGTGKTAAFMLPSLQRLAAANRRPRPGNARMLVLAPTRELASQIADSAQAYGRFMH
                     LSVGVVFGGVANGKSVRTVSRGLDVLVATPGRLLDLIDQRVLSLGELEILVLDEADQM
                     LDLGFIHALKRIVSLIPRKRQTLFFSATMPKAIKDLADRYLTNPAEVSVAPVATTVER
                     VEQRVLQVNQPEKTALLIHTLKSSPVERALVFSRTKHGADKIVRLLEAAGIPANAIHG
                     NKSQPQRERALAAFRSGEVKVLVATDIAARGIDIPGVSHVVNYDLPDVPEQYVHRIGR
                     TARAGATGIAIAFCSPDERGNLRDIERLTRQKLAVDALPADFASTVAATRALKPAAPA
                     KGGRGRTHSGDHRPNRHPAHRPQGSRPSGQRRRGSQRRRAG"
     gene            complement(7629..8198)
                     /locus_tag="VHN55_01570"
     CDS             complement(7629..8198)
                     /locus_tag="VHN55_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017666877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2802661.1"
                     /translation="MVKPVKFAHVVYMTRRFDEMISWYRNVFEAEIVYENPALAFLTY
                     DDEHHRFAFANLDILKPGDAPRDDRGEIGVNHVAYTYRNVSDLLDTYARLKRSGITPY
                     WPVHHGTTLSLYYADPDGNRMEFQVDVGTVEEAAVLMKSPAFAANPVGVMYDPDELLA
                     RFEAGEAEASLIVQPMGPPSPIPAAHGMT"
     gene            8603..>9088
                     /locus_tag="VHN55_01575"
     CDS             8603..>9088
                     /locus_tag="VHN55_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013834365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2802662.1"
                     /translation="MATDPNKNAYGAESIKVLKGLDAVRKRPGMYIGDTDDGSGLHHM
                     VFEVSDNAIDEALAGHCDKILITLNADGSVSVEDNGRGIPPDVHKGEGVSAAEVIMTQ
                     LHAGGKFDNTSDENAYKVSGGLHGVGVSVVNALSEWLELTVWRDGKEHFLRFRNGEAE
                     AP"
BASE COUNT         1561 a         3161 c         2848 g         1518 t
ORIGIN      
        1 gcctcgacat catcggccgc ggccagttcc tggcctcgat ctttctcatc ggcggcactg
       61 ccggggtgtt cgccggcggc tggttcgccg acaggctcgg tcagggcgat cgctcctggt
      121 acgccaagct gccggcaatc gcgtggctga ttaccgcgcc gatgttcgtg gtcggcctga
      181 tggcgcccag cctgtggatc gcctggcctc tgctgctgat ccccaatgcc ctgaacatcc
      241 tctggctggg ccccgtcacc accgcagtcc agcacctcgt tgaacgcccg cttcgggcga
      301 ccgcttcggc aagcttcctt ctgatcaaca acctgatcgg cctcggagtc ggcccgactt
      361 tgatcggcgg cctttcggac ctgttcaagg cgcgcttcgg caccgaggcg ctgcgctacg
      421 cgactgtcag cgtcgtcggc ttctacctgc ttgccgcctt gctgatgttc ttcgccgtat
      481 cccggctccg aaagggctgg gtcgaggact cgccgcaagc ctgaacgccg cggaaatctg
      541 cggttcacac tattgcgccg aaatgctggc tcgggccgac gaagcaccct tgcgacgagg
      601 aacgccggtc ccgacatctt cgttgatatc gtgaaacgat ggagtttttt gacatgacca
      661 ggttgattct ggcggcaggc gtcgccgctc tggcgattac cgccccggcg accgcagggc
      721 ccgataagaa caggggtgcg aagtccgcac acgtccagaa ggaacgtggc gcgaagtcgg
      781 gcaagcattt cgcccagcag gacaaggcgc gcggcaagcg cgccgaaaag gcccagaagg
      841 tgcgcaagca gtccgcagag cgcaggcaga aggccgacgg ccagcgcgcg aaggagcagc
      901 gcaaggtcgc cgagcgccgg ttcaaggcgc aggacaagac gcgcgagcgc cgcgatgatc
      961 gcctcgaacg gattgccgac cgccgcgacg tggttcgggt ccgtgaaatc gatcgccgcg
     1021 accgcgatgg ccgccgcttc gcagcggacg ccaagggcta tggaatcggc gggtgcccgc
     1081 cgggactggc gaagaagccg gttcgctgca tgcctccggg ccaggccaag aatctggtcg
     1141 gcgagcgtgt gcgggtgctt ggcgaccggg tcagccttcg cgacatcccc aaccgtctgc
     1201 gcagcgtcta tcgcgacacg cccgattatt actaccgcta cggcgacggc tacatgtacc
     1261 gggtcaaccg aagcaacgac gtcgtcagct cgctgctgcc gctgttcggc ctcggcatga
     1321 ccgccggcca ggtcttcccg accagctaca acagttacgg cctgccgatg gcgtaccagc
     1381 cgttctaccc ggcgatggcc aacaacaact accgctatgc gaacgggtac atctacgagg
     1441 tcaatccgta caccgggctg atcgaggacg tcgacccgat gctcggctac ggctacggct
     1501 acgggcagat gcttccggcg acctattcag cgtataacgt gccgtaccag taccggccgc
     1561 tctattacga cacgccgaac gcttattacc gctatgcacc gggcgcgatc taccaggtcg
     1621 atccgtcgac cagcctgatc accgccatcg cctcgcttct gtcgccgggg cttacggtgg
     1681 gccagccgct tccggccggt tacggcgcct ataacgtgcc ttatgcgtac cggacccaat
     1741 attacgacac tccggacgcc atgtaccgct acgcgaatgg ctccatctac agggtcgatc
     1801 cggcgaccca gctggtgacg gcgctggtcg tctcggcact gacctgatcc atcatggatc
     1861 gcaatcggcc ccgcatgcgt tgcggggccg tattgttttt ttcttcagga ggcatgcgta
     1921 tgttgaagac gcttccgctg tgcctgtgcg cggcaacgct ggccctggcc gcctgcggcc
     1981 agtccgggtc ggagaacgcc gctcccgacc agtcaggcga agccaaggaa gccgcgggcg
     2041 accagacgat cgcggcttcg gtggaccaga acggcaggtt cttccaggcg gccaaggcag
     2101 tcggcctcga cgcaactctt gccgggccgg gcccgtacac cgtactggtc ccgagcgacg
     2161 atgcgttcgg aaaggtggag ggcgacgcga tttccaatcc cgccgatccc gccaaccgcg
     2221 ctcagatcac gcggatcctg acctatcaca tccttcccgg cgtgatcctc gccgatgata
     2281 tttccaaggc catcgacaat ggcgacggcg gcaaggccgc gctcgccacg atgggcggcg
     2341 aaacgctgac cgcgaccaag gacggctcca acatcgtcct caccggcgcg gatggaagca
     2401 aagcgacgat cgccaaggcg gacatcaagg cctccaacgg agtcattcac gacatcgatg
     2461 gcgtccttgc tccgccggcc ggcgcttccg ccgggggcgg cgagcaacag ccggcccagt
     2521 aacttccgga attcgcgcag ctacccactg gcaaggcgct tctcgctcgc tataacaagc
     2581 cgaaccatgg ctttgacggg gcgaggggcg cgcaatgaaa gcgacgattg aacgggcgac
     2641 actcctgaag gcgctcgccc acgtccaatc ggtggtggaa cgccggaaca cgatcccgat
     2701 cctgtccaac gtcctcatag aagcgcgcga cgacaattcg atgcggatga tggcgaccga
     2761 cctcgacctc caggtcgacg agagcgtgcc cgccaacgtc gagcaggcgg gggcgactac
     2821 cgtccccgcc cacacgctgt tcgatattgt ccgcaaactg cccgagggga gccaggtcga
     2881 actgaatgtc gccgagggca agatgcacct ttcggccggc cgctcgcggt tccacctgtc
     2941 gactcttccc cgcgacgatt tcccggtcat ttccgaaggc gagctgccga ccagcttcga
     3001 gcttcctgcg gcgactctcc gccagatcat cgacaagacc cgcttcgcca tctcgagcga
     3061 ggaaacccgc tattatctga tgggcatctt cctccatctc gccgacgacc agctcaaggc
     3121 cgccgccacg gacggccacc gcctcgcccg cgtcgtcctg cccaagcccg acggcgccga
     3181 cgggatgccg gacatcatcg tgccgcgcaa atgcgttgcc gagctccgca agctgctcga
     3241 agaggtcgag ggcacggtcg aagtgtcgct gtcgccgacc aagatccgct tcgggctcgg
     3301 gagcgcggtg cttaccagca agctgatcga cggcaccttc cccgactaca accgggtcat
     3361 ccctaccgcc aacgacaagc ttctgaagct cgacccgaag accttctcgt ccggcgtcga
     3421 ccgggtttcg accatcgcca gcgaaaagac ccgggcggtg aagatgagcc tcgaccgcga
     3481 caaggtgacc ctgtcggtca cgtcgcccga aagcggcacc gcgaccgagg agcttccggc
     3541 cgattacggc gccgacacgc tcgagatcgg cttcaacgcg cgctacctgc tcgacatatt
     3601 gggcgagatc gagggcgaca cggtcgaggt ccacctcgcc gacgcggccg cccccaccct
     3661 gctccgcgag aacgacaagt cgaacgcgct ctatgtcctg atgccgatgc gggtgtgatg
     3721 atctgccgag tctggcgcgg gtggaccacg ccggaaaatg ccgatgccta ccagcgcatc
     3781 gtccaccagg acgtgatccc cgccatcgag gcgcgccaaa tcccgggctt ccggcacatc
     3841 gacctgatgc ggcgcgagct tggcgacgag gtcgagttcc agaccctcat gtggttcgac
     3901 agcctcgatt ccatcaaggc gttcgtcggc gaggattata gcgtcagcca cgtgccggag
     3961 gcggcgcggg cggtgctgaa gcggttcgac gaacgcgcga cccattacga agtcatcgac
     4021 cgaagggaac agtagcggct agacgaaggc gtgcacgtca gccgcctagc cctcaccgac
     4081 ttccgctcct acgccgacgc gttgatcgag ccgcggcccg gcttcgtcct tctccatggc
     4141 gagaacggcg ccggaaagac gaacctgctc gaagccgtgt cgctcctgtc gcccggccgc
     4201 gggcttcgcg gggcggcatt gtcggacatg gcccggcagg cgggacaggg cgccttcgcg
     4261 gttgcggcac gcttcggcga aatcgacatc ggtaccggca cgaccaccgc ctctcccgag
     4321 cggcgccagg tcaggatcaa cggcgcgccg gcgtccgcca attcgctcgg cgagtggctg
     4381 tcggtcctgt ggctcacccc ggcgatggac cggctgttca ccggcccggc cggcgagcgc
     4441 cgccgattcc tcgaccggct ggtgctcgcg ctcgagccgg gccacgcccg ccatgccgcg
     4501 cgctacgaag cggcgatgcg ctcgcgcaac aagctcctgt ccgagcccca gggtgccgac
     4561 gcgtcgtggc tcgaagcgct cgaagcgcag atggccgagc atggcgcggc gatagccgat
     4621 gcgagggcgc gaacggtcgc cgcgcttggc gagcggactt ccgaagcccc cgacgaccag
     4681 ttcgcccgag ccgcgctggc gctcgacggc tgggccggcg gcgacctggc ggccgagctt
     4741 cgcgatagcc gcacccgcga cgcggcggtc gggcggacgc tggtcggccc gcaccggcag
     4801 gacctcaccg tcacccaccg cgccaaggcg atgccggcgg cgcaatcctc gaccggcgag
     4861 cagaaggccc tactcctcgg cctcgtgctc gcccatgccg agctggtcgc cgacaagcgc
     4921 gggcagccgc cgctgctcct cctcgacgaa gtcgccgcgc acctcgaccc gaagcgccgg
     4981 gccgcgctct ttgcgcgcct cgagggccgc gggcaggtgt ggatgacggc gaccgaagcc
     5041 gcgctgttcg acgggatcgg cgccgcctcc cgcttccacg tcgagccggg gctcgtcgag
     5101 cagggctgac gcccgctgcc ctggtggcct agtagcgcaa cacaccaagt cccttcccga
     5161 aagctggcgg aattcaccct cgactccctg tcctggcgat ccagccaagc ggtgcaattc
     5221 gccgcatttc tcacgattcc cgctgctggc acagcgcttg cttcagcagg tgaagacaca
     5281 acggggagtg aatcgtggat cggcggaaag tggcgggtgg cgtcctggtc gtgcttgtcg
     5341 tcgtggtcgt cgccggcggg ctgctgtcgc ccgcgcgtga ctggttctcg atcgacaacc
     5401 tgaggcacag ccgcgactgg cttgccgaac tggttcacgc ccggccctat ttgtggggat
     5461 cggcattctt cgccctgtgc gtcgtcgcga ccgcgctctg cttcccggcg gctcccgtgc
     5521 tcggcgtgac cggcggagca ttgttcggct tctggccggg gctggtcatc gtcacggtcg
     5581 catcttcgat cgggtcgacg atcgccttct tcgactcccg ctacctcttc cgcgactggg
     5641 tgaagcgaaa gctcggccgg cgaatggaag ccatcgacca aggcgtcgaa aagcacggcg
     5701 cgctctacct gctgatcctt cgcttgaacc cgctggtgcc ctactggctc gtcaacctgg
     5761 cgatggggct gacggtcatg cggccggcta cctacgtccc gctgaccgtt gccggcctcg
     5821 cgcctgcgac cttcatctac gttcagaccg ggaccagcat ctccaccctc ggaagcggca
     5881 gcgagtccgc ctccgtcccg ctcctcgtcg ccctgtttct gatcagcgcg gtcccggtct
     5941 acctgaagct cttggcgcgc ttcgaaccgc aggcctgagg cgaaggatgg acatttaagc
     6001 tttcgcccct atatcgcact gcaacacgag gcgctttttc aagcggcgtg atcggctcaa
     6061 cgctttaagc ggtaaccggc ccgcgcctcg aattcctgct ctcctattca cgcggggcgc
     6121 tcttttgacc cgctcgcggt gcgcttaacg cgcatcgccc gcacatattg gattccagac
     6181 aatgtcattc atgtcactcg ggctctcgaa gccccttctc gatgcgctcg ccgcgaaaga
     6241 ttattcgaaa gcgacgccga tccagctcca ggccattccg acggtcctga gcggccgcga
     6301 cctcttgggc atcgcccaga ccggtaccgg caagacggcg gccttcatgc ttccgtcgct
     6361 tcagcggctc gccgcagcca accggcgccc gcgcccgggc aatgcccgaa tgctggtgct
     6421 cgccccgacc cgcgagctcg cctcgcagat cgctgacagc gcccaggctt acggtcgctt
     6481 catgcaccta tcggtcgggg tcgtcttcgg cggagtcgcc aacggcaaga gcgtccgcac
     6541 cgtctcgcgc ggcctcgatg tcctcgtcgc cacgcccgga cgcctgctcg acctgatcga
     6601 ccagcgcgtc ctcagcctcg gcgagctcga aatcctcgtc ctcgacgagg cggaccagat
     6661 gctcgacctc ggcttcatcc acgccttgaa gcggatcgtc agcctgatcc cgcgcaagcg
     6721 ccagaccctg ttcttctcgg caaccatgcc caaggcgatc aaggacctgg ccgaccgtta
     6781 cctgaccaat ccggccgaag tgtcggtcgc gccggtggcg accaccgtcg agcgggtcga
     6841 gcagcgcgtc ctccaggtca accagccgga aaagaccgcg ctcctgatcc acacgctcaa
     6901 gtcgagcccg gtggagcggg cgctggtgtt cagccgcacc aagcacggcg cggacaagat
     6961 cgtccgactg ctcgaagcgg ccgggattcc cgccaacgcc atccacggca acaagagcca
     7021 gccgcagcgc gagcgcgcgc tcgccgcctt ccgctcgggc gaggtgaagg tgctcgtcgc
     7081 gaccgacatc gccgcgcgcg ggatcgacat cccgggcgtc agccacgtcg tcaactacga
     7141 cctgcccgac gttccggagc agtacgtcca ccgcatcggc cgcaccgcgc gcgccggcgc
     7201 caccggcatc gccatcgcat tctgctcgcc cgacgagcgc ggcaacctgc gcgatatcga
     7261 acggctgacc aggcagaagc tcgccgtcga cgccctgccc gccgatttcg cttcaactgt
     7321 cgcagcgact agggcgctca agcccgcagc gcccgcgaag ggtggccgcg gccgtaccca
     7381 ttccggcgac caccgcccca accgccaccc ggcgcacagg ccccagggct cgcgcccgtc
     7441 aggccagcgc cgccgcggca gccagcgcag gcgggctggc taggccgcgg acgttaaacg
     7501 atagggcgtc ttatcctttt ctccctggaa gggagggtcc gggggtgggt gcagccgagg
     7561 cgatcggcgg tgcgagaagg atcgcctccg ctcgcctgaa aagtgggcat tgccgagggt
     7621 gaaggggctt acgtcatccc gtgagcagcc gggatcggcg acggtggccc catcggttgg
     7681 acgatgaggc tggcttccgc ttcgccggcc tcgaaacggg ccagcagctc gtctggatcg
     7741 tacatcacgc cgaccggatt ggcggcgaag gcgggcgatt tcatcagcac ggccgcttcc
     7801 tcgaccgttc cgacgtccac ctggaactcc atccggttgc cgtcggggtc cgcgtagtag
     7861 agggacagcg tggtcccgtg atggactggc caataggggg tgattccgga gcgcttcagg
     7921 cgcgcatagg tgtcgagcag gtcgctcacg ttccggtagg tgtaggcgac gtggttcacg
     7981 ccgatttcgc ccctgtcatc gcgaggcgcg tcgccaggct tcaagatgtc gagattggcg
     8041 aacgcgaacc ggtgatgctc gtcgtcatag gtcaggaatg cgagcgccgg attttcatag
     8101 acgatctcgg cctcgaaaac gttgcggtac cacgaaatca tctcgtcgaa gcgccgcgtc
     8161 atatagacga catgcgcgaa cttgaccggc ttcaccattg gttgtctccc ctgaaccgtg
     8221 ccgaacgcat ggcgcggacg gcgaccgccc caggcacagg gtcgccggcg gccattacca
     8281 tttcggcagc gcggtgtcgc tagccgctaa tgtccgcttc ccacccgttg cggagttcgg
     8341 ggccgagcgc cgcgcttttt gctgtcctac agccacccgt ctgtgcttca gcatgggcga
     8401 tgaagctcga cgctccttcc tttgcggctg gtgacgctcg accaggccgc aaagctcaca
     8461 aagtagaaga agtagaagga cccccgattc ggctggtggg gtcagtcgac gaacgggtcc
     8521 tcacccgttt ttatccattc cctcacgcgc gcgcacgcgt acgcgcgcgt gacttctgag
     8581 tgaaaaaccc tatatctggc ccatggcaac agatcccaac aagaatgctt acggcgccga
     8641 gtcgatcaag gtgcttaagg gcctcgacgc ggtccgcaag cggcccggaa tgtatatcgg
     8701 cgacaccgac gacggctcgg gcctccacca catggtgttc gaggtctcgg ataatgccat
     8761 cgacgaggcg ctcgccggcc attgcgacaa gatcctgatc accctcaacg ccgacggctc
     8821 ggtctcggtg gaggacaatg gccgcggaat tccgcccgac gtccacaagg gcgagggcgt
     8881 ttccgccgcc gaggtcatca tgacccagct ccatgccggc ggaaagttcg acaacacctc
     8941 ggacgaaaat gcctacaagg tctccggcgg ccttcacggg gtcggcgtca gcgtcgtcaa
     9001 cgcgctttcc gaatggctcg agctcaccgt ctggcgcgac ggcaaggagc atttcctccg
     9061 cttccgcaac ggcgaggcag aagcgccg
//
LOCUS       DATAKH010000041         7000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35987,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000041 DATAKH010000000
VERSION     DATAKH010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7000
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35987"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="VHN55_01580"
     CDS             <1..390
                     /locus_tag="VHN55_01580"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003051630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEX2802663.1"
                     /translation="GTATTFDLVGSDGAYKGGIIAPGINLSIDALVNAAAKLPRIAIE
                     APADDSVVGRTTESQMLIGIYWGYVAMMEGLIARMKAQVGRKVTVVGTGGLAALFDKR
                     TDIFDAVEPDLTIQGLSLLYEGLSAGE"
     gene            387..2030
                     /locus_tag="VHN55_01585"
     CDS             387..2030
                     /locus_tag="VHN55_01585"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEX2802664.1"
                     /translation="MTHGEELLFCALGGSGEIGMNVNLYGCRGQWLMVDLGLTFADTY
                     YPGIDLILPELEFIERQQDRLAGIVLTHGHEDHIGALPYLAEDLKVPLYATPFTAGLI
                     ASKLEEEGLTGHVPLHIIDREGSVELGPFKVTYVALAHSIPEGNGVLIETPFGSVFHT
                     GDWKIDETPVLAEPSSAETLQRIGDQGVLALVCDSTNVFQEEPSGSEAGVHAGLREQV
                     AKAKGRVLVTTFASNAARLKTIGEVAVDTGRQVCVAGRSLERILNVAQATGYLLDFPQ
                     RISFEEAMGLPRSEVLIIATGGQGEPRAALGRIATGSHELKLSEGDTVIFSSKIIPGN
                     EIAIGRIMNALSDLGVEIVTEKQAHVHVSGHPGRPELAAMYDWIRPHIIVPVHGEARH
                     LAEQARFALDHGVPKAVVQKNGDVVRLAPGDPKKIDEIRVGRLVLDGDVILPADGATV
                     NERRRISVGGLITVALPIGSDGKLAGPPHIRPFGVPVEEDRDDFISDATDSAQRAFDG
                     KADEEKMREAVRLAVRRCATAWTGKKPIVEVMVVRVEIA"
     gene            2027..2299
                     /locus_tag="VHN55_01590"
     CDS             2027..2299
                     /locus_tag="VHN55_01590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1467 family protein"
                     /protein_id="HEX2802665.1"
                     /translation="MKWTSILAIYFLFFVGSAFILLPFGVKTDEEVGNELVRGQADSA
                     PHVFSLPKHLFRAALLSGVVTGLFVLNYVYGWIVPDDLDLYRRIFG"
     gene            complement(2296..4599)
                     /locus_tag="VHN55_01595"
     CDS             complement(2296..4599)
                     /locus_tag="VHN55_01595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802666.1"
                     /translation="MTATSPHSAPPHHPESEAPEPESVNSAPAGGFDQMQWDESRAGD
                     SPATAGGRTVLATALILLAAAWTAYSAWSAGRALGNGPLTSPEIAQWVAVATGPLALL
                     GLVWLMFGRTRRKEAEKFTQSVVAMRTEARSLEAILAVLSQRINDSRSELTMISEHLM
                     SLGDKATDKLGGLTREFDSSTDKLVQHGQALDRAAEMARTDIAVLLDDLPRAEQHAVA
                     ISQQLRGAATETAERAAQFDAQLAALSERTREADETVSAAAQRLVAHLTHIESAGAAA
                     AVRVGEAESGFSTAVEALLDRTGTTLDEIRAGIDIQAQAVTALVEQAEAGIGRAGVDA
                     AEALGSNVNAANSALEGLTARVAEQERASQRMIADIDRALGELDQRFAALAGAGNEHA
                     GRFLEALGRSRAELGALGQETGIQQESVDALAERTQSLQAALERLSATVRAHLTQALD
                     EAGGKTDHLVNATRSVRPEIEWIRDAAREAGERLDSTGSAIGEQQDRVSALLGSLEHG
                     VGEAENRLAGLATAIASAQAEAAQLTHETGPELVQAMVQVREAASHAAERAREAIASV
                     IPESAEGFSEATREALERVIRESVEDRLREVEIIAARAVDSARGATDRLTQQMLILGQ
                     SATALEQHVEKQQEGDRQADSEAFARRVALLIDSMHSASIDVGKILSDEVDEKAWDSY
                     LKGDRGVFTRRAARLIGGSEAKAIRSHYESDGEFQQSVNRYVHDFEAMLRRVLAERDG
                     GMIAVTLMSSDMGKLYAALSDALDRRR"
     gene            4683..5882
                     /locus_tag="VHN55_01600"
     CDS             4683..5882
                     /locus_tag="VHN55_01600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802667.1"
                     /translation="MAVGALISACLEDESGSLRALLPIAGRTLLEYQVRCASAAGAAP
                     IVVLVEQIPIALNEVLGRLQQDGIAVTTVSDAAEAATRFGAGELVLVIADGLAPSPEL
                     IASVADEEEPVIVTVPDDEAHAKFERIDAVSRWSGVAAVDSQTLGATAAILGDWDLQS
                     TLLRRSLQGGARTVPIPTGTGDPLLAESRNDLADLDRHLIVASRGSRRDWASRYVLPL
                     VEELATEKLVETRIRPENFVQGELLLSIAAVAAFATGWLWVGLALLVVASPLSLIARR
                     LAALRLKPMAAKSLTRRLLWPVAGAALIALGWWQAGHGGGWGALFAAVTGAAFAEAAR
                     VEREKLEFSGEIWLVSRRNAILAALPFAALGHWTSYLVALAIYAGASFFFVQHVNHRI
                     GTELTRR"
     gene            5989..6957
                     /locus_tag="VHN55_01605"
     CDS             5989..6957
                     /locus_tag="VHN55_01605"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEX2802668.1"
                     /translation="MPTVRLDFFLDPSARLTEQERALMAGMLADLVNSIGDEFRSRLG
                     GLEPANDEGEQLAQRLRRSGLLDIGDLVRLLLHRAEDERISTGLRAGREGSRPRFLQA
                     LVSDENAEISAAAMALILARGRRRDRFGGPRILFDDLSAESAVVLVNAIAAALRTDLV
                     KRLDPADADERLGTASRSVLAGHDEGNRLEARLFDLVHALGEAGRLDESLIRSALDDG
                     EASLLGEALGRTAGISFQPAWEHLTGGSGGLALLLRMSGSSRTLAGEVIARLAEVVAA
                     DPESEIAGFDSLSEQDVDSARKWLRLDPAYRSAIETLASGHGQRSL"
BASE COUNT         1102 a         2290 c         2316 g         1292 t
ORIGIN      
        1 gggaccgcga cgactttcga cctcgtcggc agcgatggcg cttacaaggg cgggatcatc
       61 gctcccggaa tcaacctgtc gatcgacgca ttggtcaacg cagccgccaa gcttccccgg
      121 atcgcgatcg aggcgcccgc ggacgacagc gtcgtcggcc ggaccaccga aagccagatg
      181 ctgataggca tctactgggg ctatgtcgcg atgatggaag ggttgatcgc gcggatgaag
      241 gcgcaagtcg gtcgcaaggt taccgttgtc ggcaccggcg ggctcgccgc cctgttcgac
      301 aaacggaccg acatcttcga tgctgttgag cccgatttga cgatacaggg gttgagtctc
      361 ctgtacgaag gactgtcggc gggcgaatga ctcacggaga agaactgctg ttctgcgcgc
      421 tcggcggctc gggcgaaatc ggcatgaacg tcaatctcta tggctgccgc ggacagtggc
      481 tgatggtcga tctcggactg accttcgccg atacctatta tcccgggatc gacctcatcc
      541 tccccgagct cgagttcatc gagcggcagc aggatcggct cgccgggatc gtgctcaccc
      601 acggccacga ggatcatatc ggcgcgcttc cctaccttgc cgaagatttg aaagtcccgc
      661 tttacgcgac acccttcacc gccggcctga tcgcttcgaa gctggaggag gaggggctta
      721 ccgggcacgt cccgctccac atcatcgacc gcgagggatc ggtcgagcta gggccgttca
      781 aggtcactta tgtcgcgctc gcccactcga ttccggaggg caatggagtc ctgatcgaaa
      841 cgccgttcgg cagcgttttc cataccggcg actggaagat cgacgagacc ccggtgcttg
      901 ccgagccctc gagcgcggag acgctgcagc gcatcggcga ccaaggcgtg ctggcgctcg
      961 tttgcgactc gaccaacgtt ttccaggaag aaccttccgg ctccgaagcc ggagtccacg
     1021 cggggctccg cgagcaggtg gctaaggcca aggggcgagt attggtcacg acatttgcgt
     1081 cgaacgcggc acggctgaag acaattggcg aagtcgcggt cgacaccggc cgccaggtct
     1141 gcgtcgccgg ccgctcgctg gagcggattc tcaacgttgc gcaggcgacc ggctaccttc
     1201 tcgatttccc acagcggatt tcgttcgagg aggcgatggg gctaccgcga agcgaagtgc
     1261 tcatcatcgc caccggcggg caaggggagc cgagggcggc gctcgggcgg atcgccaccg
     1321 gcagccacga gctcaagctc agcgaaggcg acaccgtcat cttttcctcg aagatcatcc
     1381 ccggcaacga gattgcgatc gggcggatca tgaacgcttt gtccgacctc ggtgtggaga
     1441 tcgtcaccga gaagcaggca cacgtccacg tctccggcca tccggggcgc ccggagcttg
     1501 cggcgatgta cgattggatc cggccgcaca tcatcgtccc ggtgcacggc gaggcccggc
     1561 atttggccga acaggcgcgt ttcgcgctcg atcatggagt gcctaaggcg gtagtccaga
     1621 agaacggcga cgtcgtccgt ctcgccccgg gagacccgaa gaagatcgac gaaatccggg
     1681 tcggccggct ggtcctcgac ggcgacgtca tcctccccgc cgacggagcg accgttaacg
     1741 agcggcggcg gatcagcgtc ggcggcctca tcaccgttgc tcttccgatc ggttccgacg
     1801 gcaagcttgc cggcccgccg cacatccgcc cgttcggagt gcccgtagaa gaggaccgtg
     1861 acgacttcat ctccgacgcg acggattccg cgcagcgcgc tttcgacggc aaggcggacg
     1921 aggaaaaaat gcgcgaggcg gtgcggctcg ccgtccgccg ctgcgccacc gcatggaccg
     1981 ggaagaagcc gatcgtcgag gtgatggtgg tgagggtcga gatcgcgtga agtggacgtc
     2041 catactcgcg atctacttcc tgttcttcgt cggcagcgcg ttcatcctgc tcccgttcgg
     2101 cgtcaagacc gacgaggaag tcggcaacga gctcgtccgg ggtcaggcgg atagcgctcc
     2161 gcatgtcttc agcctgccga agcacctgtt tcgcgcggcg ctgctctcgg gggtcgtgac
     2221 cggcctgttc gtcctcaatt acgtctacgg ctggatcgtc cccgacgatc tcgacctgta
     2281 ccggcggatc ttcggctagc ggcgccggtc cagcgcgtcg gatagcgcag cgtagagctt
     2341 gcccatatcg gacgacatca gcgtgaccgc gatcattccg ccgtcgcgct cggcgaggac
     2401 ccgacgaagc atcgcctcga aatcgtggac atagcggttg accgactgct ggaattctcc
     2461 gtcggactcg taatgcgacc ggattgcttt cgcctcgctt ccgccgatca gccgcgcggc
     2521 tcgcctggta aagactccgc ggtcaccctt caggtaggaa tcccaagctt tttcatcgac
     2581 ttcgtcggat aggatcttgc cgacgtcgat cgacgccgag tgcatggaat cgatcagcaa
     2641 agcgacgcgg cgtgcgaagg cttcgctgtc cgcctgccgg tccccttcct gctgcttctc
     2701 gacatgctgc tccagcgcgg ttgcgctttg accgaggatc agcatctgct gggtcagccg
     2761 gtcggtcgcc ccgcgcgccg agtccaccgc gcgggcggca atgatctcca cctcgcgaag
     2821 ccggtcctcg acgctctcgc ggatgacccg ctcgagggcc tcgcgggtgg cttcgctgaa
     2881 gccttcggcg ctttcgggaa tgacgcttgc gatcgcttcg cgggcgcgct cggcggcatg
     2941 ggacgccgct tcgcgcacct gcaccatcgc ctggacgagc tcgggtccgg tttcgtgtgt
     3001 aagctgggcc gcttcggctt gagcactggc gatggcggtc gcgaggccgg ctagccggtt
     3061 ttcggcctcg cccacgccgt gctccagcga gccgagaagc gcggataccc ggtcctgctg
     3121 ctctccgatc gcggagccgg tcgagtcgag ccgctcgccc gcctccctgg cagcgtcgcg
     3181 gatccattcg atttcgggac ggaccgagcg cgtcgcgttg acgaggtggt ccgtcttgcc
     3241 gcccgcttcg tcgagcgcct gggtcagatg ggcgcgcacc gtcgcggaaa gccgttcgag
     3301 tgccgcctgg agcgactggg tgcgctctgc cagcgcgtcg accgactctt gttggatacc
     3361 ggtttcctgc ccgagtgcac caagctcggc tcgagatctg cccaaggctt cgaggaaccg
     3421 cccggcatgt tcgtttccgg ccccggcgag cgccgcgaac ctctggtcga gctcgcccaa
     3481 agcgcggtcg atgtccgcga tcattcgctg cgacgcgcgc tcctgctcgg caactcgagc
     3541 ggtcaggccc tctagcgcgc tattggccgc attgacgttt gatccgagcg cttcggccgc
     3601 atccaccccg gcgcgaccga tcccggcctc cgcctgttcc acgagcgcgg tgacggcctg
     3661 ggcctggatg tcaatgcccg cacggatttc atcgagagtc gtgccggttc ggtcgaggag
     3721 cgcttcgacg gcggtcgaaa atcccgattc cgcttcaccg acccgcaccg ccgcggccgc
     3781 tccggcgctc tcgatgtggg tcaggtgcgc gaccagtctc tgcgccgcgg cggaaacggt
     3841 ttcgtcggct tcgcgggtgc gctccgacaa ggccgcgagc tgcgcatcga actgggcggc
     3901 gcgctcggcg gtctcggtcg ccgcgcccct tagctgctgc gaaatcgcga cggcgtgttg
     3961 ttcggccctc ggaaggtcat cgagcagcac cgcaatgtcg gtccgcgcca tttccgccgc
     4021 ccggtcgagc gcctggccat gctgaaccag cttgtcggtg ctcgagtcga actcgcgcgt
     4081 tagcccgccg agcttgtcag tggccttgtc gcccaggctc atcaaatgct cgctgatcat
     4141 tgtcagctcg gatcggctgt cgttgatccg ctgagaaagg accgcgagaa tcgcctcgag
     4201 cgatcgcgcc tccgtccgca tcgcgacgac cgactgggtg aatttctcgg cttcctttcg
     4261 acgggtccgg ccgaacatca gccatacgag gccaagcagc gccagcggac cggttgcgac
     4321 cgcaacccat tgcgcgattt ccggcgacgt cagtggtccg tttccaagcg cacggcccgc
     4381 tgaccacgcg ctataggcgg tccaagcagc ggccagcagg atcagcgcgg tggcaaggac
     4441 cgtgcgtccc ccagccgtcg cgggtgaatc gccggcgcgg ctctcgtccc attgcatctg
     4501 gtcgaagccg cccgccggag cgctgtttac gctctcaggc tcgggtgctt ccgactccgg
     4561 atggtgcgga ggggcggaat gggggctggt tgcggtcatg gaccgcagtt taccaccttt
     4621 gttcgagcaa gaaagcgatt agaaccggca gtgaaagcga gcgtgtgtcg aggaggggac
     4681 aaatggctgt gggagcgctg atctccgcct gtcttgagga cgagtcaggc tcgcttcgcg
     4741 cgcttctgcc gatcgctggc cggaccttgc tcgaatatca ggtccgctgt gcgtcggctg
     4801 ctggcgccgc gccgatcgtc gtcctcgtcg agcagatccc gatcgctctc aacgaggtgc
     4861 ttggccgact gcagcaggac ggaatcgcgg tgacaactgt cagcgacgcc gccgaggcgg
     4921 caacccgctt cggagcgggc gagctggtcc ttgtcatcgc cgatggtctc gccccttcgc
     4981 ccgagctcat cgccagcgtt gccgacgaag aggaaccggt catcgtcacc gtccccgacg
     5041 acgaagcgca cgcgaagttc gagcgaatcg atgcggtaag ccgctggtcc ggtgttgcgg
     5101 ccgtcgattc gcaaacgctc ggggcgaccg cggcaatcct cggcgattgg gatcttcagt
     5161 cgactttgct gaggcggagc ctccagggcg gggcccgaac ggtcccgatc ccgaccggaa
     5221 ccggcgaccc gctgcttgcc gagagcagga acgacctggc cgacctggac cggcacctga
     5281 tcgtcgcgtc gaggggctcg cggcgcgatt gggcgagccg ttacgtgctt ccgctcgtgg
     5341 aggagctcgc gaccgaaaag ctggtcgaaa ctcgcattcg gccagagaat ttcgtccagg
     5401 gtgaactgtt gttgtcgatt gcggcggttg ctgccttcgc gaccggctgg ctgtgggtcg
     5461 gtctcgcatt gctggtcgtt gcttcgcccc tgagcctgat tgcccgccgt ctcgccgctc
     5521 ttcgactcaa gccgatggcc gcgaaatcgc tgacccggcg gcttttatgg cctgtcgcgg
     5581 gcgccgcgct gatcgcgctc ggatggtggc aggcgggaca cggcggaggc tggggtgcgc
     5641 tgttcgccgc tgtcactggc gcggcctttg ccgaagccgc gcgagtcgag cgcgaaaagc
     5701 tcgagttttc cggcgaaatc tggctggttt ccaggcgcaa cgcgatcctt gcagcgttgc
     5761 ccttcgctgc cttgggccac tggacatctt accttgtcgc gctcgcgatc tacgccgggg
     5821 cgagcttttt cttcgtccag cacgtcaacc atcggattgg cacggagttg acccggcgtt
     5881 aactcaagcc gggtaatcag gggcgcgatg gtgcctgtcg aatggccagt tgccgctgcc
     5941 gatcaaggcg gtggggcgtt tgccgcgcgt gtcgcgggcg gtagccgctt gccgaccgta
     6001 aggctcgact tctttctcga tccaagcgcc cggctgaccg agcaggaacg tgccctgatg
     6061 gcagggatgc tcgccgacct cgtcaattcg atcggcgatg aattcaggtc gcgccttggc
     6121 ggcctggagc ctgcgaacga cgagggcgag caactggcgc agcggctccg ccgaagcggt
     6181 ctcctcgaca ttggcgacct cgtccggctt ctcctccacc gcgccgagga cgagcggatc
     6241 tccaccgggc tcagggctgg ccgcgagggc agcaggccgc gcttcctgca agcgctggtc
     6301 agcgatgaaa atgcggagat ttccgcggct gcaatggcat tgatcctcgc caggggacgc
     6361 cgccgcgacc ggtttggcgg gcctcggatc ctgttcgacg acctgtcggc ggaatccgcg
     6421 gtcgtgctcg tgaacgcaat cgctgccgcg cttcgaaccg atctcgtcaa acgcctcgat
     6481 ccggccgatg ccgacgagcg gctcgggaca gccagccggt ccgtgcttgc cggccacgac
     6541 gagggtaatc gcctcgaagc gcggcttttc gatctcgttc atgcgcttgg cgaggcaggg
     6601 cgactcgatg agagcttgat tcgctccgct ctcgacgatg gcgaagcctc gctgcttgga
     6661 gaggctctcg ggcgaacggc cggaatctcg ttccagcccg catgggagca cctcacgggc
     6721 gggtcgggag gcctggcctt gctgcttcga atgagcggct cctcgcgaac gcttgccggg
     6781 gaggtcattg cccgtctcgc ggaggtcgtc gcggcggacc ccgaaagcga aattgctggc
     6841 ttcgattcgc tatctgagca ggacgtggac agcgcccgca aatggcttcg gctcgatccc
     6901 gcctatcgct cggcgatcga aacattggct tcgggccatg gccagcgctc cctctgaccc
     6961 caggccgatc ctcggccgtg tcgacgcggg cggccggctg
//
LOCUS       DATAKH010000042         2251 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_974,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000042 DATAKH010000000
VERSION     DATAKH010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..535)
                     /locus_tag="VHN55_01610"
     CDS             complement(161..535)
                     /locus_tag="VHN55_01610"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX2802669.1"
                     /translation="MKLLLAVAVTGLSLAASAAAQRPTTVAPIQLYSYGYNPNPIVLR
                     AGVPVTLVFQNVSGNGHTFKAQAFFQSARILAGMPHEGEVHVKPRQSMSVTLVPTRGT
                     YPVHCSHFFHDQLGMHTAIYVR"
     gene            complement(622..1077)
                     /locus_tag="VHN55_01615"
     CDS             complement(622..1077)
                     /locus_tag="VHN55_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006962867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA2169 family four-helix-bundle protein"
                     /protein_id="HEX2802670.1"
                     /translation="MDRDTEVGVLETLTTTVIDSVNGYEDAAKNSENSRFEQIFRERA
                     SERRQVVDNLRSEIRRLGGDPPDDGSFMGKTHQTWLDLKAAVTGRDDQRIINSVEAGE
                     DYLKEKFETALNSGDLSGEARQVIESAYQSVRKGHDQMSQLKHGMETQS"
     gene            1223..>2251
                     /locus_tag="VHN55_01620"
     CDS             1223..>2251
                     /locus_tag="VHN55_01620"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2802671.1"
                     /translation="MLTRRNVLHRIGAIGGAGAAYMAMEAMGLAIPTPPGAEDFAIPP
                     GSGDGKSVVILGAGIAGLVAAYELQRAGYSVTVLEARERVGGRVWSIRGGDYIHQFGR
                     PNQRAEFDEGLYFNAGAARIPSTHRVILAYARKFGVAMEPFVNMNRSAGWDFAGKVQP
                     ERRMVNDMHGHIAELLAKAIDQRALDQVMPKAELQQFRGFLGFYGSLDGKGRYVNQGS
                     SGYSVEPGGYSQEPQPLPALALKELLPSRAVGLPYVFEYIWDQQPAMLQPVGGMDRIP
                     NAIYEQVGPLVRLRTAVTGIRRSGDRVRVEHGPGSQATEADYCICTLPMPILARIPND
                     FSAAKKKAL"
BASE COUNT          383 a          694 c          730 g          444 t
ORIGIN      
        1 aagccagccg ggagggctcg agttcgaagt gatggacatg atccaccacc ttcctttccg
       61 cgactggctt aacgtcgatg gcctcggcgc ccccactccg gattccgctg acgaggagac
      121 gagcgacatc ggcggcggca cgagctgaag cggtttccag ctatcggacg tagatcgccg
      181 tgtgcatccc cagctggtcg tggaagaagt ggctgcaatg caccggatag gtgccgcgag
      241 tcggaacgag cgttaccgac atgctctgcc gaggcttgac gtgaacttcc ccttcgtggg
      301 gcattcccgc caggatccgg gccgattgga agaaggcttg cgccttgaag gtgtggccgt
      361 tgccggacac attctggaac acgagcgtca ctggaacgcc cgccctgagc acgatcgggt
      421 tcgggttata gccgtagctg tagagctgga tcggcgcgac cgtggttggg cgctgcgctg
      481 cagccgaggc agccagcgaa agtccggtga ctgcgactgc gaggagaagt ttcattagaa
      541 tcctccatcg ttcgatttgc agcccctgaa atcgtggggc ggcggcgcac tgccgccgcc
      601 ccggaactca agttgtcatc gtcagctctg cgtctccatt ccgtgcttga gctggctcat
      661 ctggtcatgg cccttccgga ccgactggta agcgctttcg atgacctgcc gggcttcgcc
      721 gctgagatcg ccgctgttca gcgcggtttc aaacttctcc ttgagatagt cctcgccggc
      781 ttcgaccgag ttgatgattc gctggtcgtc gcgtcccgtg accgcggctt tgaggtcgag
      841 ccaggtctgg tgggtcttgc ccatgaacga accgtcgtcg ggcgggtcgc cgccaaggcg
      901 acggatttcc gacctcaggt tgtcgacgac ctgccgccgc tcgctcgccc gctcgcggaa
      961 aatctgttcg aagcgggaat tctcgctgtt cttggccgcg tcctcatagc cgttgacgct
     1021 gtcgatcacg gtcgtcgtca gtgtctcgag aacgccaacc tctgtgtctc tatccatttt
     1081 ttaatcctcc ttgctggaaa atgccgttgc ccaaacaacg cgtcagcggg tcaggcgatg
     1141 cgcttccatt cggaaaatgc cgagcatgtg ccgcgattcc gtgtcactct gccttacggg
     1201 gaacaggggg gagtcgagtc gcatgctcac gcgtcgcaac gtacttcaca gaatcggagc
     1261 gatcggcggc gccggggccg cctacatggc aatggaggcg atggggcttg caattcccac
     1321 tcctccggga gccgaggatt tcgcgatccc gccgggtagc ggcgacggga aatcggtcgt
     1381 catcctaggg gcgggtatcg ccgggctcgt ggcggcttat gagctgcagc gggccggcta
     1441 ttccgtcacc gtcctggaag ctcgcgaacg cgtgggcggg cgcgtatggt cgatccgcgg
     1501 cggcgactat attcaccagt tcgggcggcc caatcagcgc gccgaattcg acgagggtct
     1561 ctacttcaat gccggcgcgg cccggatccc ttccacgcat cgcgtgattc tcgcctacgc
     1621 gcgcaaattc ggcgtggcga tggagccgtt cgtgaacatg aaccgcagcg caggctggga
     1681 cttcgccgga aaggtccagc ccgaacggcg gatggtgaac gacatgcacg gccacatcgc
     1741 cgaattgctg gccaaggcca tcgaccagcg ggcgctcgac caggtgatgc cgaaggccga
     1801 gctccagcaa ttccgcggat ttctgggctt ttacggaagc ctcgacggca agggccgtta
     1861 cgtaaaccag ggcagctcgg gctattcggt cgagcctggc ggctattccc aggagccgca
     1921 gcccttgccg gcgctcgcgc tgaaggagtt gctgccgagc cgcgccgtcg ggctcccgta
     1981 tgtcttcgaa tatatctggg accagcagcc ggccatgctc cagcctgttg gcgggatgga
     2041 tcggattccg aacgcgatat acgagcaggt cggtccgctg gtccggctcc ggacggcggt
     2101 gaccgggatc cgccgctccg gcgaccgcgt gcgtgtcgag cacggcccgg gctcgcaggc
     2161 gaccgaagcg gactattgca tctgtacttt gccgatgccg atcctggcgc gaattccgaa
     2221 cgatttttcc gccgcgaaga agaaggcgct g
//
LOCUS       DATAKH010000043         5971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20001,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000043 DATAKH010000000
VERSION     DATAKH010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5971
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20001"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..551
                     /gene="pdxH"
                     /locus_tag="VHN55_01625"
     CDS             <1..551
                     /gene="pdxH"
                     /locus_tag="VHN55_01625"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007706700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEX2802672.1"
                     /translation="DWFAEARASEPNEAEAMALATANPDGRPSARMVLLKAHGPEGFT
                     FYTHYGSRKGEEIAANRNVALLFHWKSLCRQVRIEGVAHQVEPEEADAYFATRPRDSQ
                     IGAWASKQSRPLANREAFEARYAEMKQKFDGMAVPRPSDWSGFRVVPEAIEFWTAREH
                     RLHERRLFTLSADGWSEGLLYP"
     gene            548..1504
                     /locus_tag="VHN55_01630"
     CDS             548..1504
                     /locus_tag="VHN55_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019830950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX2802673.1"
                     /translation="MSGAHPHGHGHAHGDDRSSLTSRAALASISMAVLLIGLKSWAAL
                     QTSSMAMLGSLTDSTLDLVASLVVLLGVRVAAQPADYQHRFGHGKAEALAALAQVVII
                     SISALFIGFRSVQRLLEGAETADAELGIGVSLVAIGFTVALLAYQQYVVRRTGSVAIS
                     TDRLHYASDLMLNASVIVALVLDQYAGVVGADAVFGLLIALWLARGAWMSSSNALAQL
                     MDREWPDQMRERFLEAARKFPELEGLHDLRTRTSGTHNFVQFHVWVPADWTVKEAHDR
                     MDRIEQELEKQFPATEILIHLDPEGHTDREGVLPAHIAEQPE"
     gene            1501..2280
                     /locus_tag="VHN55_01635"
     CDS             1501..2280
                     /locus_tag="VHN55_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004209761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEX2802674.1"
                     /translation="MTTLPFFQVDAFADAPLTGNPAAVMPLDAWLDDTLMQRIAAENN
                     LSETAFAVPSAADSADYDLRWFTPTTEVDLCGHATLASGHILITGERIRFSTRSGVLT
                     VSREDELLKLDLPAYPSQPADLPGVKEALGVSGEAFASEGGNNSAIVLLSSEEEVRAV
                     RPDFAALREFDRLVIVTAPGDEHDVASRVFAAYHGIDEDPVTGAAHAALVPFWAKRLG
                     RHEFTAFQASERGGTLYCREAGQRVILGGHCVTVITGNFQL"
     gene            complement(2258..2734)
                     /locus_tag="VHN55_01640"
     CDS             complement(2258..2734)
                     /locus_tag="VHN55_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX2802675.1"
                     /translation="MPPPLSSGILLFRRTSAETEVLLIHPGGPFWTNRDSGAWMIPKG
                     RVDPGESPAAAAAREFAEELGTPLASAPFPLCRVRQSGGKIVEAFGAEGDFDPSTLNS
                     MEFEMEWPPRSGSMKRFPECDRARWMTIAEARRMMLPSQLPMLDALESWLRAGSSR"
     gene            complement(2718..3833)
                     /gene="mnmA"
                     /locus_tag="VHN55_01645"
     CDS             complement(2718..3833)
                     /gene="mnmA"
                     /locus_tag="VHN55_01645"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEX2802676.1"
                     /translation="MIVNFGLDRPKGSRIVVAMSGGVDSSVTAALAARTGAEVIGVTL
                     QLYDHGEAVKRTGSCCAGQDIYDAKQVADRLGIAHYVLDYESRFREGVIDKFADEYAH
                     GRTPIPCALCNQGVKFTDLIAFAGELGADCLATGHYVRRVANGNRVELHKGADPKRDQ
                     SYFLYGTTSEQLRFLRFPLGDLPKPEVRRIAIDTGLSVASKPDSQDICFVPDGDYASL
                     VKRLRPETQAPGDIVDLGGRVLGEHRGVVHFTVGQRRGIEIGGSAEPLYVVRIEPETR
                     RLVVGPRSALAIERIRVEDLSWIGEDQNSVTVKVRSLAPAVPAQIEGRWVRFERPEYG
                     VAPGQAAVFYDGSRVLGGGWIAETVAADTRLSRAAAA"
     gene            4233..4532
                     /locus_tag="VHN55_01650"
     CDS             4233..4532
                     /locus_tag="VHN55_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008995171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1153 domain-containing protein"
                     /protein_id="HEX2802677.1"
                     /translation="MLENQKIRPAQVIGPLGEPLTLDSLPPPNTNRWVVRRKAEVVAA
                     VAGGLLTVDEACERYSLSLEEFTSWQRAVDRSGMPGLRVTRIKHYRDVYERQQRY"
     gene            4715..4975
                     /locus_tag="VHN55_01655"
     CDS             4715..4975
                     /locus_tag="VHN55_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX2802678.1"
                     /translation="MGFIVWLIVGGIIGWLASLIMRTDAQQGIILNIVVGIIGAVIAG
                     LIFGGGNINSSNPLDLTNILWSLLGAVILLAIVNLIRRGTVR"
     gene            complement(5072..5797)
                     /locus_tag="VHN55_01660"
     CDS             complement(5072..5797)
                     /locus_tag="VHN55_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEX2802679.1"
                     /translation="MKTIYVAALFAAAALPVAPAVAQPTAQITQAIAGTRLDVSASGE
                     VSRVPDLAVISAGVVTRAATATAALRENSDRMDRVLAALKSAGIADRDIQTSSINLNP
                     EYRYVENQAPQLVGYTASNQVTVRFRDIRNSGKVLDALVSQGANQINGPNMTIEHPET
                     ALDEARAKAVAAGRARANLYARALGMRVVRIVSVSESGGSYPVPPPMPYAERAVMAGD
                     AATKIVPGEQKLQVNLSMVFELQ"
BASE COUNT         1046 a         1907 c         1944 g         1074 t
ORIGIN      
        1 acgattggtt cgccgaagcg cgggcgagcg agccgaacga ggcggaagcg atggccttgg
       61 caaccgccaa tccggacggc cggccgtcag cgcggatggt gctcttgaag gctcatgggc
      121 cggagggatt caccttctac acccactacg gcagccgcaa gggcgaagag atcgccgcca
      181 atcgcaatgt cgccttgctg ttccattgga aatcgctgtg ccggcaggtg cggatcgagg
      241 gagtcgcgca ccaggtcgag ccggaggagg cagacgctta tttcgcgacc cggccccgcg
      301 actcgcagat cggcgcctgg gcatcgaagc aatcgcggcc gttggccaat cgcgaagctt
      361 tcgaggcccg ctacgcggag atgaagcaga agttcgacgg aatggcggtc ccgcgcccga
      421 gcgactggtc ggggttccgg gtcgtccccg aggcgatcga attctggacc gcgcgcgagc
      481 accgtctgca cgagcggcgg ctgttcacgc tatccgcgga cggctggtcc gaaggactgc
      541 tctacccgtg agcggagcgc acccgcacgg ccacggccat gcccatggtg acgatcgttc
      601 gtccctgacg tctcgagcgg cgctcgcaag catttccatg gccgtgctgc tgatcgggtt
      661 gaaaagctgg gctgcgctgc agacatcgtc gatggcaatg ctcggctcgc ttaccgacag
      721 cacgctcgac ctggtcgcca gcctcgtcgt tttgcttgga gtgcgtgtcg ccgcccagcc
      781 tgcggactat cagcaccgct tcggccacgg aaaggccgag gcactggcgg cgctggcaca
      841 ggtcgtcatc atctccatct cggcgctgtt catcggattt cgctcggtcc agcggctttt
      901 ggagggggct gaaacggcgg atgcggagct tgggatcggc gtgtcgctgg tagccatcgg
      961 cttcaccgtc gcactgctcg cctaccagca gtacgttgtc aggcgcaccg gttccgtcgc
     1021 gatctccacc gaccggctgc actacgcttc cgacctgatg ctcaatgcct cggtgatcgt
     1081 cgcacttgtc ctcgaccaat atgcgggagt cgtcggcgcc gacgcggtct tcgggctgct
     1141 catcgccttg tggcttgcgc gcggtgcctg gatgtcgtcc agcaacgcgc tcgcgcaatt
     1201 gatggatcgc gagtggccgg accagatgcg cgagcgattc ctcgaggcgg ctcgcaagtt
     1261 cccggaactc gagggcctgc acgatctgcg gactcggaca agcgggacgc acaatttcgt
     1321 tcagttccac gtctgggtgc ccgccgactg gacggtgaag gaagcgcacg accggatgga
     1381 ccggatcgag caggagctcg aaaaacagtt tccggcgacc gagatcctga tccacctcga
     1441 tccggaaggg cacaccgacc gcgagggggt gcttccggcc cacattgcgg agcaaccgga
     1501 atgacgacac tgcccttctt ccaggtcgat gccttcgcgg acgctccgct gaccggcaat
     1561 cccgcggcgg tcatgccgct ggacgcctgg ctcgacgata ccctgatgca gcgcatcgcg
     1621 gccgagaaca atctcagcga aaccgcattc gcggtcccgt ccgcggctga ctctgcagac
     1681 tatgacctgc gctggtttac cccgacgacc gaagtggacc tgtgcggtca cgccactctg
     1741 gcttccgggc acatcctgat caccggcgag cgaatccgct tctccacccg ctccggcgtg
     1801 ttgacggtca gccgcgaaga tgagctgctg aagctcgatc tgcccgctta tccttcccag
     1861 ccggccgacc tgcctggcgt gaaggaagcg cttggggttt ccggcgaggc cttcgccagc
     1921 gagggcggca acaatagcgc gatcgtgctc ctctcctccg aggaggaggt tcgagcggtg
     1981 cggccggatt tcgcggcgct gagagagttc gaccggcttg tgatcgtgac cgcgcccggc
     2041 gacgagcacg acgtcgcaag ccgagtcttc gccgcttatc acggaatcga cgaggacccg
     2101 gtcactgggg ccgcccacgc ggcgctggtc cccttctggg ccaagcgcct gggccgccac
     2161 gagttcaccg ctttccaggc cagcgagcgc ggtggaaccc tctattgccg cgaagccggc
     2221 cagcgggtga tcctgggcgg ccactgcgtc acggtcatca ccgggaactt ccagctctaa
     2281 gccagctctc gagcgcatcg agcatcggca actggctcgg aagcatcatc cggcgcgcct
     2341 ccgcaatcgt catccaccgc gctcggtcgc attccgggaa acgcttcatg gagccgcttc
     2401 gcggcggcca ttccatttcg aattccatgc tgtttagggt ggatggatcg aaatccccct
     2461 cagcgccgaa agcctcgaca atcttgcccc ctgactgccg cacccggcac agagggaagg
     2521 gcgccgatgc gagcggggtg cccagctctt cggcgaactc gcgggccgcg gcagcggcgg
     2581 gactttcgcc gggatcgacg cggcctttcg ggatcatcca ggcgccggaa tcgcggttcg
     2641 tccagaacgg tccgccggga tggatgagca gaacttcggt ttcggcgctt gtccggcgaa
     2701 acagcaggat tcccgagcta agcggcggcg gcacgggaaa ggcgggtgtc cgctgcgacc
     2761 gtctcggcaa tccagccgcc gccgagcacc cgcgagccgt cgtagaaaac ggcggcctgc
     2821 ccgggcgcga ccccatattc ggggcgctcg aagcgaaccc agcggccctc gatctgcgcc
     2881 ggcacggccg gtgccagcga gcgcaccttc acggtcacgg aattctggtc ctcgccgatc
     2941 cagctcaaat cctcgacacg aattcgctcg atcgccaggg cgctgcgcgg cccgacgacg
     3001 aggcggcggg tctcgggctc gatccggacc acgtagagcg gctcggcgct tccgccgatc
     3061 tcgatccccc tgcgttggcc gaccgtgaag tgaacgactc cgcgatgctc cccaagcacc
     3121 cgtccgccca gatcgacgat gtcgccgggt gcttgcgttt cgggccgaag ccgcttcacc
     3181 agcgaagcgt aatcgccgtc gggaacgaag cagatatcct ggctgtcggg cttcgaagcg
     3241 acggacaggc cggtgtcgat cgcaattcgg cggacctcgg gcttcggcag gtcgcccagc
     3301 gggaagcgca ggaagcggag ctgttcggac gtcgtgccgt agaggaaata gctctggtcg
     3361 cgcttcggat cagcgccctt atgcagctct actcggttgc cgttagcgac cctgcgcaca
     3421 taatggccgg tggccaggca gtcggcgccg agctctccgg caaaagcgat caggtcggtg
     3481 aacttcaccc cctggttgca caaggcacag gggatcggcg tccgcccatg cgcatattca
     3541 tcggcgaact tgtcgatcac gccctctcgg aagcggcttt cgtaatcgag gacgtaatgg
     3601 gcgatcccga gccggtcggc gacttgcttg gcgtcgtaaa tgtcctggcc cgcgcagcag
     3661 gagccggtgc gctttaccgc ctcgccgtgg tcgtaaagct ggagagtcac tccgatgacc
     3721 tcggcacccg tccgcgcggc gagcgcggcc gtgacggagc tgtcgacgcc gccggacatg
     3781 gcgacgacga tccgcgagcc cttggggcgg tcgaggccga agttaacaat catttgtcgt
     3841 tgtggggcgg ctctttacgc gaagttcact cctcactgct agtccgcttc gggacgaagg
     3901 cagttcaggg ggtgccgtgt cgcgaatcga aggaaaaatc ggtgaagagg gtgacgaacc
     3961 ggtcgatgcc gcggagatcc tggccgcgct tgccagcgat agcgattcga aggccagccg
     4021 acggaaaggc gcggtgcgtt gttacctctc agcgagcgaa ggctggcgcg aggcattgtc
     4081 agtccttggg ggcgcgttcg cgagcgacga gtcatggttg aaggcgaaca agcaaaagtg
     4141 agcgacgaat taaccagcgg ttttgacaat atcttcaacg cggcggtctt aagacaggca
     4201 catcgcaatt ttacgaagca ggtttgacgg gaatgctcga gaaccagaaa attcgccccg
     4261 cacaagtcat cggccccctc ggtgagccgt tgacgctcga ctcgttgccg ccgcccaaca
     4321 ccaaccggtg ggtggtgcgc cgaaaggcgg aagtcgttgc ggcggtcgct ggcggcctgc
     4381 tgaccgtcga cgaggcgtgt gagcgctatt cgttgagcct cgaggaattc accagctggc
     4441 agcgcgcggt cgaccgtagc ggaatgccgg gattgcgggt tacccgaata aagcactatc
     4501 gcgacgtcta cgagcgccag caacgctact gatcctcagc gtccgccttt cgtgaggcgt
     4561 gcggaaccgg tgatttcggt ggattacccg ctctttcggc gccgcaaggc tggacagacc
     4621 ctttccaatc cggaacaaca agggcgcatc aggcgtcttt aggtgctcca ggccgccgag
     4681 tatcatggcg gtcccaaaca ggaggggaac gctcatgggt ttcatcgttt ggcttatcgt
     4741 cggaggcatc atcggctggc tcgccagcct gatcatgcga actgacgccc agcaaggcat
     4801 catcctcaat atcgtcgtcg gaataatcgg cgcggtcatc gccgggctga tcttcggcgg
     4861 cggcaatatc aacagctcta acccgctcga cctgaccaat atcctgtggt cgctcctcgg
     4921 tgcggtcatc ctgctcgcga tcgtcaacct catccgtaga ggcacggtcc gctaggggca
     4981 tcgccaagtt cgactaacga ggccgcgccg ggcgaaccgg cgcggccttt cgttattcag
     5041 cccggacttc cccgggacgt gcttcgcgca attactgcag ctcgaaaacc atcgacaggt
     5101 tgacctgcag cttctgctcg ccgggcacga tcttcgttgc agcatcgccc gccatgaccg
     5161 cgcgctccgc gtaaggcatc ggcggcggaa ccggatagga gccgccgctt tcgctgaccg
     5221 acacgattcg aacgacccgc atgccaaggg cgcgggcgta gaggttggca cgggcccggc
     5281 cggcagcaac ggccttggct cgagcttcgt cgagcgccgt ctcgggatgc tcgatcgtca
     5341 tgttggggcc gttgatctgg ttcgcgccct gggaaacgag cgcgtcgagg accttgccgc
     5401 tgttgcggat gtcgcgaaac cggaccgtca cctggttgga ggcagtgtag ccgaccagct
     5461 gcggcgcctg gttttcgacg taacgatatt cgggattgag gttgattgag cttgtctgga
     5521 tgtcacgatc ggcgatgccg gcgctcttca gtgcggcgag gactcgatcc atccgatcgg
     5581 aattctccct gagtgcggca gtcgctgtcg cggctcgagt cacaaccccg gcgctgatta
     5641 cggccagatc cggcactcga gagacctcgc cgctcgcgct gacgtcgagc cttgtccccg
     5701 caatcgcttg ggtgatctgc gccgtgggct gggcaacggc gggtgcgacc gggagcgcag
     5761 cggcggcgaa tagtgcggcg acgtaaatcg tcttcatcga gtcattccct tgtcgaccat
     5821 cgttgcatca gggaattgcc ataccgatat ggctgttgcc tgaatggtgc gcctgcgccc
     5881 gttcaggcgc gccggctgac gatcagacgg taaagtccga gaatgatgaa agcgccgacg
     5941 atggcggcaa tgaatcccgc gccctcgcca t
//
LOCUS       DATAKH010000044         4686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_24554,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000044 DATAKH010000000
VERSION     DATAKH010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4686
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24554"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..984
                     /locus_tag="VHN55_01665"
     CDS             <1..984
                     /locus_tag="VHN55_01665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2802680.1"
                     /translation="DRTAQSLLLTGRHWVPQSDFRSIAPFLQGNLKLLDGKVRLAGGV
                     RRENVKLNVPDFTTLASYGSRSVEGGSPSFGKTLVNGGVVVEPVDGLRGYASYAEGYT
                     IADVGRILRGINTDGVRVDDFLSLEPVVSNNRELGLEWRRGAVTASASYWWSDSDLGS
                     ILVRGMDGIFSVARQPISLQGLDLSADWQTPVEGVRLGAAYARVDGTTDPDGDGTLDA
                     DLDGANIAPNRLNLYAALERGAFDARLTMRNYLSRSFEGQDPRNDFDGYTLFDALLGY
                     RMGSHRVVFGVQNLTDEQYVTYYSDTQGPTDNLRFFAGRGRTFTLGVTSEF"
     gene            992..2074
                     /locus_tag="VHN55_01670"
     CDS             992..2074
                     /locus_tag="VHN55_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007684437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HEX2802681.1"
                     /translation="MKTISTIHRWAGGFIGFLLALLALTGTLLLWEGEWVSLPGAGDP
                     VAENVGTIAAITERAATTGELQRITFASDETALHLLIYAGGGGAYVRQDGSVVDSWSS
                     QWARPELWLFDLHHHLFSGATGETLTGIAGIAGLLFVVTGILLWLRSRGRFRPTVLPR
                     RMSPGAIVKHHRDLGILAAPLLVLSMATGVLMVFPKAGEVLLAPLGSGTAGAREIAGA
                     APPAGPVLTSALEQSKGAFPGAALRRISLPAAPGSPVVVRMKQEFEWTPNGRTQLEFD
                     GESGRLLTISDPATGPLLAAVVEKFYPLHSAKVGGLAMKLLMSLSGLSLAMLGTFAVY
                     SFWFRKAKRRPARGTGRIGAIKALRG"
     gene            2329..>4686
                     /gene="rpoB"
                     /locus_tag="VHN55_01675"
     CDS             2329..>4686
                     /gene="rpoB"
                     /locus_tag="VHN55_01675"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEX2802682.1"
                     /translation="MATQAIDVPALNTGRTASARRIRKIFGNIHEISEMPNLIEVQRE
                     SYEQFLRSDPAIGYVSGLEKTLRSVFPIEDFAGTAHLDFDHYVLEEPKFDTDECRQRG
                     LTYAAPMRVTLRLTTFEIDPDTEARSVIDIKEQDVYMGDMPLMTMNGTFIINGTERVI
                     VSQMHRSPGVLFDHDRGKTHASGKYLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRK
                     LPVTALLHALGLSSEEILNTFYNTVVYERGKNGWQIPYLSEAWRGQKPMYDVADAKTG
                     EIIFKSGEKITPRRANQAAKDGLKNVIIPTEEIFGRFSAYDLINEKTGEIYIEAGDEV
                     SEENLAKMDEAGIKTLELLDIDYVNTGPWMRNTLKADKSEDQDSALSDIYRVMRPGEP
                     PTKETADALFYGLFFDPERYDLSAVGRVKLNMRLGLDAEDTVTTLRREDILAVVQELV
                     NLKDGKGEIDDIDNLANRRVRSVGELLENQYRIGLLRMERAVKERMSSVDVSTVMPND
                     LINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRD
                     VHPTHYGRICPIETPEGPNIGLINSLASFSRVNKYGFIETPYRKVVDGKVTNDVVYLS
                     AMEEAKHTIAQANAELNKDKTFAEEIVSARRNGDFLMAPRDQITLMDVSPKQLVSVAA
                     SLIPFLENDDANRALMGANMQRQAVPLVRAEAPFVGTGMEETVARDSGAAISATRGGI
                     VDQVDATRIVVRATGELRAGESGVDIYTLMKFQRSNQNTCINQRPL"
BASE COUNT          865 a         1516 c         1524 g          781 t
ORIGIN      
        1 gaccgcaccg cgcagtcgct gctgctgacc gggcgccact gggtgccgca gagcgatttt
       61 cggagcattg cgccattcct ccagggcaat ctgaagcttc tcgacggcaa ggtccggctg
      121 gcaggagggg tcaggcgcga gaacgtgaag ctcaacgtgc ccgacttcac caccctcgcc
      181 tcctacggat cgcgctcggt cgagggggga agcccgagct tcggcaagac cctggtcaac
      241 ggcggagttg tcgtcgagcc ggtcgacggg cttcgcggct acgcttccta tgcggaaggc
      301 tatacgatcg ccgacgtcgg gcgaatcctg cgcgggatca ataccgacgg ggtgcgggtg
      361 gacgacttcc tgtcgctcga gccggttgtt tcaaacaatc gcgagctggg gctggaatgg
      421 cgccgcggcg ccgtcaccgc cagcgcgagc tactggtggt ccgacagcga cctggggtcg
      481 atcctggtgc gcgggatgga cggcatcttc agcgttgcac ggcagccgat ttcgctacag
      541 gggctcgact tgagcgccga ctggcaaacg cccgtcgagg gagtccggct cggcgccgcc
      601 tacgccaggg tcgatggcac caccgacccc gatggagacg gaacgctgga tgccgatttg
      661 gacggcgcca acatcgcgcc caaccggctc aacctctatg ctgcgctaga gcgtggggcg
      721 ttcgacgctc ggctgacgat gcgcaactat ctctcgcgct cgttcgaagg gcaggatccg
      781 cgcaacgact tcgatgggta caccttgttc gacgcgctgc ttggataccg gatgggatcg
      841 catcgggtcg tgttcggcgt ccagaacctg accgacgagc aatatgtcac ttattacagc
      901 gacacgcagg ggccgactga caatctgcgc ttcttcgccg ggcgaggccg gacgttcacg
      961 ctcggcgtga ccagcgagtt ctgacgcggt cgtgaagacg atttcgacta ttcaccgctg
     1021 ggcgggcggc ttcatcgggt tcctgctggc gcttctggca ctgactggaa ccctcctctt
     1081 gtgggagggg gagtgggtgt cgcttcccgg cgccggcgac cccgttgccg aaaacgtcgg
     1141 cacgatcgcg gcgatcaccg agcgagccgc cacgacgggc gagttgcagc ggatcacctt
     1201 cgccagcgac gagactgcgc tccacttgct gatctatgcc ggcggcggcg gcgcctatgt
     1261 tcggcaggac gggagcgtcg tggacagctg gtcgagccaa tgggcgcggc cggagctgtg
     1321 gctgttcgac ctgcaccatc atttgttttc cggggcgacg ggcgaaaccc tcaccggaat
     1381 cgccggaatt gcggggctgc tgttcgttgt caccgggatc cttctgtggc tgcgaagccg
     1441 cgggcgattc cggccgaccg tgcttcccag gcggatgagc cccggggcga tcgtcaagca
     1501 ccatcgcgac ctcggaatcc tcgcggcacc gcttctggtc ctgtcgatgg cgacgggcgt
     1561 gttgatggtt ttcccgaagg caggcgaggt cctgcttgcg ccgctcgggt caggcacagc
     1621 gggcgctcgc gaaattgccg gcgcagcgcc gccggcgggg ccggtgctga caagcgctct
     1681 cgagcagtcg aagggggcgt tcccgggcgc tgcgcttcgg cgcatcagcc tgcctgcagc
     1741 gcccggcagt ccagtcgtcg tgcggatgaa gcaggagttc gaatggactc cgaacgggcg
     1801 tacccagctc gagttcgatg gagagagcgg ccgcctgctc accatcagtg atccggcaac
     1861 tggaccgcta ttggcggcgg tggtcgaaaa attctacccg ctgcacagcg ccaaggttgg
     1921 gggcctggcg atgaagctgc tgatgagcct gtctggcctt tcgctggcaa tgctcggcac
     1981 cttcgccgtc tattccttct ggttccgcaa ggcgaagcga aggcccgcgc gcgggacggg
     2041 gcggatcggg gcgatcaagg cgctacgagg gtgactgcga actcgccttc cccctcttgc
     2101 aagccgccga aataggatta tatcggcttc atccaaacat atcggctctg gccgcacgct
     2161 gtcgtgcgcc cggagctttt cccgtcctct ccgggacagg gcccgaaccg gcgcacgggc
     2221 tcaacgcatt ggagagggaa gcggggcaag cgctcaggac tgaacaccgg cgacgccggt
     2281 taacgcgagc caccgctggc gcggggccgc agtagcgcag ggaatataat ggcgacacag
     2341 gcgatcgacg ttccggccct caacaccggc cgaacagctt ccgcgcggcg aatccgcaag
     2401 atcttcggca acatccacga aatctcggaa atgccgaacc tcatcgaggt ccagcgcgag
     2461 agctacgagc agttcctccg ttccgatcca gcgattggct atgtgtcagg cttggaaaag
     2521 acccttcgct cggtcttccc gatcgaggat tttgccggga ccgcccacct cgacttcgac
     2581 cattatgtgc tcgaggagcc gaagttcgac accgacgagt gccgccagcg cgggctgacc
     2641 tatgccgcgc cgatgcgggt cacgcttcgc ctgacgacct tcgagatcga ccccgacacc
     2701 gaagcccgtt ccgtcatcga tatcaaggag caggacgtct acatgggcga catgccgctc
     2761 atgaccatga acggcacttt catcatcaac ggcaccgagc gggtgatcgt cagccagatg
     2821 caccggtcgc cgggcgtgct gttcgaccat gaccggggca agacccacgc cagcggcaag
     2881 tatctgttcg ccgcccgggt gatcccgtat cgcggcagct ggctcgactt cgagttcgac
     2941 gccaaggaca tcgtcaacgt ccggatcgac cgcaagcgca agctcccggt caccgcgctc
     3001 ctccacgcgc tggggctgag cagcgaggaa attctcaaca ccttttacaa cacggtcgtc
     3061 tacgagcgcg gcaagaacgg ctggcagatc ccttacctct cggaggcgtg gcgcggccag
     3121 aagccgatgt acgacgtcgc cgacgccaag accggcgaga tcatcttcaa gtcgggcgag
     3181 aagatcacgc cgcggcgcgc aaaccaggcg gccaaggacg ggctgaagaa cgtcatcatc
     3241 ccgaccgagg aaatcttcgg ccgtttctcc gcctacgacc tgatcaacga gaagaccggc
     3301 gagatctaca tcgaggccgg cgacgaggtc agcgaggaaa atctcgccaa gatggacgag
     3361 gccgggatca agaccctcga gcttctcgac atcgactacg tcaacaccgg cccctggatg
     3421 cgcaacacgc tgaaggcgga caagtcggag gaccaggatt cggcgctgtc cgacatctac
     3481 cgggtcatgc gcccgggcga gccgccgacc aaggaaaccg ccgacgcgct cttctatggc
     3541 ctgttcttcg accccgagcg ctacgacctg tccgcggtcg gccgggtgaa gctcaacatg
     3601 cgccttggcc tcgacgccga ggacacggtt acgaccctcc gccgcgagga cattctggcg
     3661 gtcgtccagg agctcgtgaa tttgaaggac ggcaagggcg agatcgacga catcgacaac
     3721 ctggccaacc gccgggtccg ctcggtcggc gagctgctcg agaaccagta ccgaatcggc
     3781 ctgcttcgaa tggagcgcgc cgtgaaggag cggatgagca gcgtcgacgt gtcgacggtg
     3841 atgcccaacg acctgatcaa cgccaagccc gcggttgccg cggtccgcga gttcttcgga
     3901 agctcgcagc tgtcgcagtt catggaccag accaatccgc tgtcggaagt cactcacaag
     3961 cgccgcgtat cggcgctcgg gccgggcggc ctgacccgtg agcgcgccgg cttcgaagtc
     4021 cgcgacgttc acccgaccca ttacggccgg atctgcccga tcgagactcc ggaagggccg
     4081 aacatcggcc tgatcaactc gctggcgagc ttcagccggg tcaacaagta cggcttcatc
     4141 gagactccgt accgaaaggt cgtcgacggc aaggtcacca acgacgtcgt ctatctgtcg
     4201 gccatggaag aggcgaagca cacgatcgcc caggcgaatg ccgagctgaa caaggacaag
     4261 accttcgccg aggagatcgt ttcggcgcgc cgcaacggcg acttcctgat ggcgccgcgc
     4321 gaccagatca cgctgatgga cgtcagcccc aagcagctgg tgtcggtcgc tgcctcgctg
     4381 atcccattcc tcgagaacga tgacgccaac cgcgccctga tgggggcgaa catgcagcgc
     4441 caggcggtgc cgctggttcg cgccgaggcg ccgttcgtcg gcaccggcat ggaagagacc
     4501 gtggcgcgcg attcgggcgc ggcgatctcc gccacccgcg gtggcatcgt cgaccaggtc
     4561 gatgcgaccc gtatcgtcgt tcgcgccacc ggcgagcttc gcgcgggtga atcgggcgtc
     4621 gacatctaca cgctaatgaa gttccagcgg tcgaaccaga acacctgcat caaccagcgc
     4681 ccgctg
//
LOCUS       DATAKH010000045        14564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_12066,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000045 DATAKH010000000
VERSION     DATAKH010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 14564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14564
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12066"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VHN55_01680"
     CDS             <1..317
                     /locus_tag="VHN55_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEX2802683.1"
                     /translation="IHSKPDAGEIQACRFWLKQERELIRAPVTVALGATAARSLVGKL
                     VTIKAVRGKPIELADGSECWVTMHPSAMLRMPDRDRRRAERERFVAEMKRVWKRAEKL
                     AG"
     gene            complement(314..2422)
                     /locus_tag="VHN55_01685"
     CDS             complement(314..2422)
                     /locus_tag="VHN55_01685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEX2802684.1"
                     /translation="MKMQATSFVAVLLASASPAIAASDDPAAAPDAIAAADNPQTVIV
                     EGKRDQYGVRSTSTATKTETDVKHIPQSLTVISEQQIEDQQLRSVSDLLYFVPGATPG
                     TGESNRDQFTLRGNSTTADLFVDSIRDDVQYFRDFYNVERVEVLRGANAMIFGRGGGG
                     GIINRVTKRSTFAPFRDFAVSGDSEGGVRLTGDFDQPLGASAGLRVNGVYENGDSFRR
                     HVDIERYGINPTVGALIGPRTRFDLSYEHFHDRRTADRGVPSDGSRPLEGFDKTFFGD
                     PDLSFARANVDVATLAVQHEISEGLTLRNRTLLGDYDKFYQNVYPSNLDEATREVILG
                     AYNSRNDRRNLFSQTDLIWNGRLGGVDQTLLFGFELGRQKSRNLRLSGTFAGGNRIPL
                     SDPTIDADVTFAPSPSDADNRTRATVAAVYVQEQLRPAEWLEIVAGLRFDSFKLKVDD
                     LRAGDGEFERTDELWSPRLGLILKPKRNLSLYASYSRSYLPQSGDQFSGLTIDTEAMK
                     PERFDNYEVGAKWEPVPGLLATAALYQLDRSNTRAPNPDGSGTVVLTGEQRTRGLELG
                     LERSITHRWQVSAGYALQKAEITSSTQSCPDGDCEVPLVPRHSFSMWNRHDVTRNLGV
                     GLGMIARTKSFASISNDVVLPGYVRVDAAAFYRITRAIQLQVNVENLFGADYFPTAHN
                     DNNIAPGAPRTVKAALRVGF"
     gene            complement(2500..3843)
                     /locus_tag="VHN55_01690"
     CDS             complement(2500..3843)
                     /locus_tag="VHN55_01690"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX2802685.1"
                     /translation="MSDAFIPPCPPRGPGPVAPWRGFFGERARTAVYGWSEQAFRTWH
                     ISRTVFGHRIHIPLHPDAVQRVLLDNSANYEKPKLVKRVLMPTIGSGLLSSDGDLWRK
                     QRKIVAASFTPPAVDALVPVFGEVAAEAAGPWPGGFLDMAAEATKATMQVISRALFSG
                     DPRITSREASAHITAALEAVTDARMQVLLGLPLIPISPRGIRGRSGQRYLRKTLGNVV
                     RERLREGAPDDFTGQVARALIEQFPREQAIALAVDNAITFYLAGHETTSNAISWTLFV
                     LSRLPELQDEAAEEGRAALQAGVDSKLPDRLPLLRSIVEETMRLYPPAPRMDREAVEP
                     DRLGDHAISAGDIVSVWPWLLHRHERLWEEPDRFDHLRFLGEERKTRHRFQYIPFGGG
                     PRTCVGGRFAMAEALTILAHWLSDWRFAPTGQQVQVSGMVTLRPKGGLLLNASRR"
     gene            complement(3840..7256)
                     /locus_tag="VHN55_01695"
     CDS             complement(3840..7256)
                     /locus_tag="VHN55_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013038753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2802686.1"
                     /translation="MRIRRLKLSGFKSFVEATELRIEPGLTGVVGPNGCGKSNLLEAI
                     RWVMGEGSAKSLRGDGMEDVIFAGTATRPARDFAEVSILLDRETDAEGGAGDGEVTRR
                     IERGSGSAYRIDGRDVRAKDVALLFADAATGAHSPALVSQGKIASIIASKPTERRLLL
                     EEAAGISGLHARRKDAEQKLRAAEANLARLSELLSDQEQRAAALRRQARAAERYRQIT
                     DKIRAVEARLVHARWAEADAAAEEARRDAAASEQEVERLREQVEALRGDQEQAESLLG
                     ECRRAAADARARGSEIAHQLATARARRDTVTRRMAELERLESASAADIRREEALKDDA
                     GRTIAQLEEERSAIEAGLADGEREAARIASELTELEAKSRDSEAALADLLARQAAMRA
                     ERRVAEAALESARSHQSRVQGERDKLEQQLQALGDGSESERARDEAIANARAAEQARA
                     DAEERLARAEDARSAAADARDEAETALAKARADLSAARAEHDALSRALEQGGGSAIGK
                     LSAQAGYEKALAAALGDDCDAEVGSHGARRWQGSEPLPGDPSLAPGLECLADRVNAPD
                     ELVRRLRQVGVADSDTGQQLDVGQRLVTRDGRMRRWDGFVAEGAGAAAAERLIRSNRY
                     AELARYLPELEAEVGERESKRKDALEALDRLRQDAESARSEALKAERAIREAERASDI
                     AEAAIERAQAQRSALEQRLADLQPLTKAASEAVTAAETALGTLADPAELEAETDSARA
                     RAAEAGTAVADKRAEAATRAREASAARERHSAAGREQAEWRRRQGDAEARLSQARERL
                     AQQEREREELQREPQALDEQVGALEQESAGSEAVVSKAVASEREAEAALAQAASAVTT
                     ASEASASARERRAAAQARSEAQESRRSEYARICLEKFECIPQRLPEKMGFDAADVPDA
                     EAESATLEKLTADRDRIGPVNLVAEQELAEIEDERSRGAAEAEELTQAIHRLRGSIGN
                     LNREGRVRLLEAFERVNDHFRSLFMTLFDGGQAHLELIESDDPLEAGLEIMAQPPGKR
                     LQSLTLLSGGEQALTAIALIFALFLTNPAPICVLDEVDAPLDDANVERFCDLLDRMTR
                     ETDTRYLIVTHNAVTMSRMHRLYGVTMIEKGVSRLVSVDLGGAETLLAAE"
     gene            complement(7280..8041)
                     /locus_tag="VHN55_01700"
     CDS             complement(7280..8041)
                     /locus_tag="VHN55_01700"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX2802687.1"
                     /translation="MKPSYILAAAAALASSGCNAERGNDAAVSEATATEAVKPPASGD
                     WTEVVTGTSAGGFRMGNPDAKVKLVEFGSMTCPHCAAFDKNAVEPLTSKYVKTGQVSY
                     EFRNYVRDPFDISASLIARCNGSKSFFALTHALFNDQQAWIAKVQQAPPAQLEAVQNM
                     GPDSQFLAIAKLADLQKWASMRGVPTAKSTQCLTDQASINKLVEMNSDATSAYPNFAG
                     TPTFVINGKMVELGQVTEAQVWPTLEAKIRAALGS"
     gene            complement(8038..8601)
                     /locus_tag="VHN55_01705"
     CDS             complement(8038..8601)
                     /locus_tag="VHN55_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HEX2802688.1"
                     /translation="MAKTRVGKSRDKDAPRQGRARAAGELIGNAGGAAFRRFGFIQSS
                     VVRRWPEIVGDRYARVSSPESIRFPAGKKSGGVLSVVVQGAHAPLMQHLAPLIIERVN
                     RFFGYCAIANLSFRQGAAPKREQSPKRPQLRPVPREIGEGLREIADPELRSCLEALAA
                     SIEGSDGPPEVDSPHPNPIPTVGVIRR"
     gene            8629..9627
                     /locus_tag="VHN55_01710"
     CDS             8629..9627
                     /locus_tag="VHN55_01710"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000701 - purine-specific mismatch base
                     pair DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEX2802689.1"
                     /translation="MRANVAELLLQHYVDKSRSLPWRSPPGFPPPDPYRVWLSEVMLQ
                     QTTVAAVAPRFERFVRRWPTVEALASASDEEVLSEWAGLGYYARARNLIACARKVASA
                     GGFPDTEADLRALPGIGDYTAAAIAAIAFGRSAVVVDSNVERVSARLNGFTRPTKAQI
                     RSAVASITPGNRAGDFAQAMMDLGATVCRPRAPDCHNCPLQDGCSAYASGAPEQFPAR
                     PAKKEKPARHGVAWWIERDGAVRLVRRPGRGLLGGMAALPGSDWTADKPEIAAPVLGR
                     VRHVFTHFTLDLLVVRHAPIEEGWWQPLSTIGDAGLPTLYRRAADSVLDGRRKLAA"
     gene            9617..10462
                     /gene="nudC"
                     /locus_tag="VHN55_01715"
     CDS             9617..10462
                     /gene="nudC"
                     /locus_tag="VHN55_01715"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: protein motif:HMM:NF001299.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000210 - NAD+ diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HEX2802690.1"
                     /translation="MRPEPFFCGPGLDRGDSARADSDRLAQFAVAPAARQLVWKEGLP
                     AIGSDGSLQWDEVIRPELFLGLEGQSPRFSALQETIAAGPAVFSLLGNLSPSDAPLFA
                     AALSLARWHSTHRFCANCGAASGIVRGGWSRRCGSCLAEHYPRVDPVVIMLAEHDGRL
                     LLGRQHHYPPNRYSALAGFVEVGESIEQAVARELAEEAGIEVTEVTYVASQPWPFPSS
                     MMVGCTARALDDRLTIDFSELEDARWFTRGEVAAAVQGRAGAPFQAPPPHAIARTLLE
                     HWLAA"
     gene            10530..11204
                     /locus_tag="VHN55_01720"
     CDS             10530..11204
                     /locus_tag="VHN55_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019830964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX2802691.1"
                     /translation="MDDRFNTIAGWVLFAGIVALGGSIVAGEAFHSERPETMGYPIEG
                     VEVEGEGGEAEQPIEFFLASADPAKGEQVFKKCAACHNADKGGANQLGPNLWNVMGEP
                     IGKGKGFPFSSALADKGGTWDWHSMSEWLKSPKSFAPGTKMTFAGLGSPEDRANVIAF
                     LNQHSDSPLPMPAAPAAPAGSEAAGGDADTAAAAAEGDQAQKEPVLDNTAADVKGGGE
                     AAQPNQ"
     gene            complement(11220..12116)
                     /locus_tag="VHN55_01725"
     CDS             complement(11220..12116)
                     /locus_tag="VHN55_01725"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HEX2802692.1"
                     /translation="MADSIPPKRIFPTSKVDAQSARHVPSIPQTESDAYKLAFQDMDF
                     LLREDLRPVRFQLELLKPELLLQEAKIASTFVFYGSARIPHPSKADALVEAATNDDQR
                     RVAERLKAKSPYVEKARELARLASRCECDEEGMRHFVVCSGGGPSIMEGANCGAADEG
                     KDSIGLNIVLPHEQLPNTYVTPELSFQFHYFALRKMHFLLRARAVAVFPGGFGTFDEF
                     FELLTLIQTGKVRPLPILLFGREFWNRVVDFEALAEEGVIAPHDLDLIHWSEDPQEAW
                     NHVVRFYERHPDPPRIQTAPPE"
     gene            complement(12160..13569)
                     /gene="creD"
                     /locus_tag="VHN55_01730"
     CDS             complement(12160..13569)
                     /gene="creD"
                     /locus_tag="VHN55_01730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017669594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HEX2802693.1"
                     /translation="MPLTDGFRSPAFKLFLAIVVGFALAIPLFSVWLLVYDRQSQSEQ
                     ASASITAGWGGPQAMTGPVLVIPYRATATETVVQNGQSVTRSNEVMRELTLAPEAIGL
                     STTINPEVRKRSIYEAVVYDAKVEGQARFAFPPDLARTGVDPAKMDLARAELRFGLSD
                     PRGLAANPSVTVGGRPLRLQPGGGSGGGRGFFAWIDAAGLQSAPLAVDFAYNFRGNSS
                     LTLAPDAGETRWTVRSSWPHPSFAGEFLPADRRVGDDGFSATYRVGNLALGRSLVSTG
                     EAGAAPPVDRITPPSRTTVPAAPMDVTRASGPVQTAAISLIQPVDLYSQVNRATKYGF
                     LFIGFTFLALLMFDVIAGVRVSPVEYLLMGAALILFFVLLLALAEVIGFTPAYVLASA
                     AIAGLNTAYSAAVLGSWRRAWFIGGLLVGLYAVLYILLSLEAYSLLIGSLLLFAALAG
                     VMYATRRIDWSAPRREAAD"
     gene            13733..>14564
                     /locus_tag="VHN55_01735"
     CDS             13733..>14564
                     /locus_tag="VHN55_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003040964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX2802694.1"
                     /translation="MSDAPEKPDYRPTVFLPKTDFPMKAGLPQKEPAILAGWEEQGLY
                     GQVRKSRAGRDKFILHDGPPYANGDIHIGHALNHVLKDMVVRTQTLLGKDSPYVPGWD
                     CHGLPIEWKVEEQYRKKKLNKDEVPVKEFRAECRAYAQHWVDVQREQLKRLGIGGDWA
                     NPYLTMQYDSEATIVSELFKFAETGQLYRGAKPVMWSPVEKTALAEAEIEYEDIVSTQ
                     IDVGFEIVESPIPELVGAHAVVWTTTPWTIPVNQAIAYGPEVDYVLIEGTFGDDTPDE
                     T"
BASE COUNT         2367 a         4824 c         4852 g         2521 t
ORIGIN      
        1 gaattcactc caagcccgat gccggcgaaa tccaggcctg ccgtttctgg ctcaagcagg
       61 agcgcgagct gatccgcgcc cctgtgaccg tcgcacttgg agcgacggcg gcgcgctcac
      121 tggtcggcaa gcttgtcacc atcaaggcgg tgcgcgggaa gccgatcgag cttgccgacg
      181 ggtcggaatg ctgggtgacc atgcatccga gcgcgatgtt gcggatgccc gaccgcgacc
      241 gccgccgcgc tgaacgcgag cggttcgtcg cggagatgaa acgcgtttgg aagcgtgccg
      301 agaagcttgc tggctagaag ccgacgcgaa gcgccgcctt gacggtcctt ggtgctcccg
      361 gagcgatatt gttgtcgttg tgcgcggtcg ggaaataatc ggcgccgaac aggttctcga
      421 cattcacctg cagctggatc gcgcgggtga tccgatagaa ggccgccgcg tcgactcgga
      481 catatcccgg aagcacgacg tcattgctta tcgaagcgaa cgacttcgtt cgggcaatca
      541 ttccaaggcc gactcccagg ttccgagtca cgtcgtggcg gttccacatc gagaagctgt
      601 gtctcggcac cagcgggacc tcgcagtcgc cgtccgggca ggactgggtc gaggaggtga
      661 tctcggcttt ctgcaacgca tagccggcgg acacctgcca gcggtgggtg atgcttcgct
      721 cgaggccgag ctcgagtccg cgggtgcgct gctcgccggt aaggacgacc gtcccgctgc
      781 cgtcagggtt cggagcgcgg gtgttcgacc ggtctagctg gtacagcgcc gcggtggcga
      841 gcagcccggg aaccggctcc catttcgcgc cgacttcgta attgtcgaat cgctcgggct
      901 tcatcgcttc agtgtcgatg gtgagaccac tgaactggtc acccgattgc ggcaggtagg
      961 accgcgaata gctggcgtag agcgacaggt tgcgctttgg ctttaggatc aggccaagcc
     1021 gcggcgacca cagctcgtcg gttcgttcga actcgccatc gcctgcccgc agatcgtcga
     1081 ccttcagctt gaagctatcg aaacgcagcc cggcgacgat ttccagccat tcagcgggcc
     1141 ggagctgctc ctggacatag acagcagcga cggtcgcgcg ggtgcggttg tccgcgtcgc
     1201 tcggcgaagg cgcgaatgtg acgtctgcgt cgatcgtcgg atcgctcagc ggaattcggt
     1261 tgccgccggc gaaagtgccc gacagccgca ggttgcgtga tttctgccgt cccagctcga
     1321 aaccgaacag caaggtctgg tcgactccgc cgagcctgcc gttccagatg agatcggtct
     1381 ggctgaacag gttccggcgg tcgtttcggc tgttgtaggc gccgaggatc acttcgcggg
     1441 tcgcctcgtc caggttcgac gggtacacgt tctggtagaa tttgtcgtag tcgccgagca
     1501 acgtgcggtt gcgaagcgtc agcccctccg aaatctcgtg ctgcacggcg agcgtcgcga
     1561 catcgacatt ggcgcgcgcg aagctgaggt ccggatcgcc aaaaaacgtc ttgtcgaagc
     1621 cctcgagcgg ccggctcccg tcggacggca ctccgcggtc ggcggttcgg cggtcgtgga
     1681 aatgctcata ggacaggtcg aaccgggtgc gcggtccgat cagtgccccc accgtcgggt
     1741 tgatcccgta acgctcgata tcgacgtggc ggcggaagct gtcgccattt tcatagacgc
     1801 cattgactcg aagcccagcg gacgcgccca gcggctggtc gaaatccccg gtcaggcgaa
     1861 cgccgccctc gctgtcgccc gaaacggcaa agtcgcggaa cggggcgaag gtcgagcgct
     1921 tggtcacgcg attgatgatt ccgcctccgc cgccgcggcc gaagatcatc gcgttggccc
     1981 cgcgaaggac ctccacccgc tccacgttgt agaagtcgcg gaaatattgg acgtcgtcgc
     2041 ggatgctgtc gacgaacagg tctgcggtcg tactgttgcc gcgaagcgtg aactggtcgc
     2101 ggttgctttc gccggtgccc ggagtggcgc cggggacgaa atagagcagg tccgaaactg
     2161 accggagctg ctggtcctcg atctgctgtt cggaaatgac cgtgagtgac tgcgggatgt
     2221 gcttgacgtc cgtttcggtc ttcgtcgccg tgctcgtgga gcgaacgcca tattggtcgc
     2281 gcttgccctc gacgatgacg gtctgcggat tgtccgccgc cgcgatcgcg tcgggcgcgg
     2341 cggcgggatc gtccgacgcc gcaatcgccg gcgaggcgga cgccagcagg acggctacaa
     2401 aagatgtggc ctgcattttc attcagcacc cccagttcgg gatgcgcact atcgttaatg
     2461 atagttattc gcaatagcga aaactgtacg ccagaaaggc tagcgacggg acgcgtttag
     2521 cagcaggccg cctttcgggc ggagagtgac cattcccgaa acctgcacct gctgacccgt
     2581 cggcgcgaat cgccagtcgc tcagccagtg cgccaggatc gtcagcgctt cagccatcgc
     2641 gaaacggcct ccgacgcagg tgcgtggacc gccgccgaat gggatgtact ggaaacggtg
     2701 ccgcgtcttg cgctcctcac cgaggaagcg caggtgatcg aagcggtccg gctcctccca
     2761 caggcgttcg tggcggtgaa ggagccacgg ccagacggat acgatgtcgc cggcgctgat
     2821 tgcatggtcg ccaaggcggt ccggctccac ggcctcgcgg tccatccgcg gcgccggtgg
     2881 gtacagccgc atggtttcct cgacgatcga gcgaagcagc ggaagccggt ccggcagctt
     2941 ggaatcgacg cccgcctgca aggctgcacg gccctcctcc gccgcctcgt cctgaagctc
     3001 cggcaagcgg ctgaggacga acagggtcca gctgatcgcg ttcgacgttg tctcgtggcc
     3061 cgcgagataa aatgtgatcg cattgtcgac ggctagcgcg atcgcttgct cgcgcgggaa
     3121 ttgctcgatc agcgcccgcg ccacttgtcc ggtgaagtcg tcgggggcgc cctcgcgaag
     3181 ccgttcccga acgacgttcc cgagcgtctt ccggagatat cgttggccgg agcgcccgcg
     3241 gatgccgcgg ggcgagatcg ggatcagcgg cagccccagg agcacttgca tccgcgcgtc
     3301 ggtgaccgcc tccagggcgg cggtgatgtg tgcggaggcc tcgcggctgg tgatccgcgg
     3361 atcgccgctg aacagcgccc gcgagatgac ctgcattgtc gcctttgtcg cctcggccgc
     3421 catgtcgagg aagccgccgg gccagggccc ggccgcctcc gccgcgactt cgccgaacac
     3481 cggaaccaga gcgtccaccg ctggcggagt aaagcttgcg gcgacgatct tgcgctgctt
     3541 gcgccacagg tcgccgtcgg agctcaacag gccgcttccg atcgtcggca tcaacacccg
     3601 cttgaccagc ttcggctttt cgtaattggc cgaattgtcg agaagcacac gctgcaccgc
     3661 gtccgggtgc agggggatgt ggattctgtg tccgaacacg gttcggctga tgtgccaggt
     3721 tctgaacgcc tgctccgacc agccgtaaac cgcggtcctc gcgcgctcgc cgaaaaatcc
     3781 gcgccacggc gcaacgggtc cggggccgcg cggcggacag ggcggaatga aggcgtcgct
     3841 cactcggcgg cgagtagcgt ttccgcgcct cccaagtcga ctgaaaccag ccggctgaca
     3901 cccttctcga tcatcgtcac tccatacagc cggtgcatcc ggctcatcgt cactgcattg
     3961 tgggtcacga tcaggtagcg ggtgtcggtc tcgcgggtca tccggtcgag aaggtcgcag
     4021 aagcgctcga cattggcatc gtcgagtggc gcatcgacct cgtcgagaac gcagatcggc
     4081 gccgggttgg tcaggaacag ggcgaagata agcgcaatcg ccgtcagagc ctgctcgccg
     4141 cccgagagca gggtcagcga ctgaagccgc ttgcccggag gctgggccat gatctcgagg
     4201 ccggcctcca gcggatcgtc gctttcgatc agctccagat gcgcctggcc gccgtcgaac
     4261 agggtcatga acaggcttcg gaaatggtca ttgacccgct cgaacgcctc gagcagccga
     4321 accctgccct cgcggttgag gttgccgatc gagccgcgca ggcggtggat ggcctgggtc
     4381 aactcctcgg cctcggcggc ccctcgcgac cgttcgtcct cgatttccgc aagctcctgt
     4441 tcggccacga ggttgacggg gccgatccgg tcgcggtcgg cggtcagctt ttccagtgtt
     4501 gccgactctg cttcggcatc gggaacatcg gccgcgtcga agcccatctt ctccggcagc
     4561 cgctggggga tgcattcgaa cttttcgagg cagatccgcg catattcgga gcggcgcgat
     4621 tcctgcgctt ccgaccgcgc ctgggccgct gcccggcgct cgcgggccga cgccgaggct
     4681 tcggaggcgg tggtgacggc agatgccgct tgcgcgagcg ctgcttccgc ctcccgctcc
     4741 gaggcaacgg ccttcgaaac cacagcctcg ctgcctgcgc tctcttgctc gagcgccccg
     4801 acctgctcgt cgagcgcctg cggctcccgc tggagctcct cgcgctcccg ctcctgctgg
     4861 gccaggcgtt cgcgcgcctg cgacagccgc gcttcggcat cgccttggcg gcggcgccat
     4921 tcggcctgct cgcgtccggc ggcggaatgg cgctcgcgtg cggccgaggc ttcgcgtgcg
     4981 cgggttgccg cctcggccct cttgtcggcg acggccgtcc ctgcctctgc tgcccgggca
     5041 cgggcggaat ctgtctcggc ttcgagttcc gccggatcgg caagcgttcc gagcgcggtt
     5101 tccgcagccg taaccgcctc ggaagccgcc ttggtgagcg gctggagatc ggcgagccgc
     5161 tgctcgagcg cgcttcgctg cgcctgggcc cgctcgatgg ccgcttcggc gatatcgctc
     5221 gcccgttcgg cttcgcggat ggcacgttcg gctttgagcg cctccgagcg cgcgctctca
     5281 gcgtcttgcc ggagccggtc gagcgcctcg agtgcgtcct tgcgcttgga ctcgcgctcc
     5341 ccaacttcag cctcgagctc cggcaggtaa cgcgccagct cggcataacg gttgcttcgg
     5401 atcagccgct cggcagcagc agcacctgcg ccctcggcga cgaagccgtc ccagcgccgc
     5461 atccggccgt cacgagtgac gaggcgttgc ccgacatcga gctgttgtcc agtgtcgctg
     5521 tcggcgacgc cgacctggcg aaggcgtcga accagttcat ccggtgcgtt cacacgatcg
     5581 gcgaggcatt cgagcccggg tgccagtgaa ggatcgcccg gcagtggctc gctcccctgc
     5641 cagcgccgcg ctccgtgcga tccgacctcc gcatcgcaat cgtcgcccag ggctgccgct
     5701 agggccttct cgtagccggc ttgggcagaa agcttgccga tcgcggaccc gccgccctgc
     5761 tcgagcgccc tcgacagcgc atcatgttcc gcccgagccg ccgataggtc cgctcgcgcc
     5821 tttgcgagcg cggtttcagc ctcgtcgcgc gcatccgccg ccgccgagcg ggcatcctcc
     5881 gctcgcgcca gacgctcctc tgcgtcggct cgagcttgct cggcggccct ggcgttggcg
     5941 atcgcctcgt cgcgcgcccg ctcgctttca gaaccgtcgc cgagcgcctg caactgctgc
     6001 tccagcttgt cgcgctcacc ctgcacgcgc gactggtggg agcgggcgga ttcgagtgct
     6061 gcttcggcga cccggcgttc cgcgcgcatc gcggcctgcc gcgctagcag gtcggccagc
     6121 gccgcttccg aatcccgcga tttcgcttcg agctccgtca gctccgaagc gatccgagcc
     6181 gcttctcgct cgccgtccgc aagcccggcc tcgatcgcgg agcgttcttc ctccagctgc
     6241 gcgatggtcc tgccggcatc gtccttcagc gcttcttcgc ggcgaatatc ggcagcgctc
     6301 gccgactcga gccgctcgag ttctgccatt cggcgggtca ccgtgtcacg gcgagcccgc
     6361 gcagtcgcga gctggtgggc aatctcgctt ccccgcgcgc gcgcgtcggc agcggcccgg
     6421 cgacattcgc caagcagcga ttccgcttgc tcctggtcgc cgcgcaacgc ttcgacctgc
     6481 tcgcggagcc gctccacctc ctgctcgctt gcagcggcat cgcggcgggc ctcctcggca
     6541 gcggcatcgg cctcggccca gcgcgcgtgg acaagccgcg cttcgaccgc ccggatcttg
     6601 tcggtgatct ggcgatagcg ctcggcggcg cgcgcctgcc gcctcagcgc cgccgctctt
     6661 tgctcctggt cggacagaag ctctgagagg cgggccaggt tcgcttccgc ggcgcgaagc
     6721 ttctgctcgg catccttgcg ccgtgcgtga agcccggaaa tgcccgccgc ctcctcgagc
     6781 agaagccgcc gctcggttgg cttcgacgcg atgatcgacg cgatcttccc ctggctgacg
     6841 agagcgggcg agtgggcgcc ggtggcggcg tcggcgaaca gcaaggccac gtccttggcg
     6901 cggacgtcgc ggccgtcgat ccgataggcg gagccggaac cgcgctcgat ccggcgggtg
     6961 acctcgccgt cccctgcccc gccctccgca tccgtctcgc gatcgagcaa gatcgaaact
     7021 tcggcgaagt cgcgcgcggg gcgggtggcg gtcccagcga agatcacgtc ttccatgccg
     7081 tcgccgcgga gcgacttggc gctcccttca cccattaccc agcggatcgc ttcaagaagg
     7141 ttcgacttgc cgcagccgtt cggcccgacg actccggtga ggcccggctc gatcctcagc
     7201 tccgtcgctt cgacgaaact cttgaacccg ctcagcttaa ggcgacggat acgcaagctg
     7261 cgcctccccc tctccgaatc tagctaccca aagcggcgcg gatcttcgcc tcgagcgttg
     7321 gccagacctg cgcttccgtc acctggccga gctcgaccat cttgccgttg atcacgaagg
     7381 tcggcgtgcc agcgaagttc ggataggcgc tcgtcgcgtc gctgttcatt tcgaccagct
     7441 tgttgatcga tgcctggtcg gtcaggcact gtgtgctctt ggcagtcgga acgccgcgca
     7501 tcgacgccca cttctgcagg tcggcgagtt tcgcgatcgc caggaactgg ctgtccggac
     7561 ccatgttctg gaccgcttca agttgcgccg gcggagcctg ctggaccttg gcgatccaag
     7621 cctgctggtc gttgaaaagt gcgtgggtca gagcgaagaa gctcttcgag ccgttgcaac
     7681 gggcgatcag cgaagcgctg atgtcgaacg ggtcgcggac gtagttgcgg aactcgtagc
     7741 tcacttgccc ggtcttcaca tatttggaag tgagcggttc gacggcattc ttgtcgaacg
     7801 ccgcgcaatg cgggcacgtc atcgagccga attcgaccag cttcaccttg gcatcgggat
     7861 tgcccatcct gaagccgccg gcgctggtgc cggtgacgac ttcggtccag tcgccgctcg
     7921 ccggcggctt tacggcttcg gtagcagtcg cttcggaaac ggccgcgtca ttgcctcttt
     7981 ccgcgttgca gccgctgctc gcgagggcgg ctgcagcggc aagtatgtag ctcggcttca
     8041 tcgacgtatc actccaacgg ttggaatcgg gttcgggtga ggagaatcga cctccggcgg
     8101 tccatcgctt ccctcgatgc tggccgcaag tgcctcgagg cacgagcgaa gctccggatc
     8161 tgcaatttcg cgcagtcctt cgccaatctc cctgggcacc ggccgcagct gcggccgctt
     8221 cggcgactgc tcccgtttcg gcgctgcacc ttgcctgaac gacaggttcg cgatcgcgca
     8281 atagccgaag aagcgattga cccgctcgat gatcaggggt gcgagatgct gcatcagcgg
     8341 cgcgtgcgcg ccctggacga cgacgctaag gactccgccg gacttcttgc cggcggggaa
     8401 acggatcgat tcgggggaag aaaccctggc gtaccgatcg ccgacgatct cgggccagcg
     8461 cctcacgacc gatgactgaa tgaagccgaa gcggcggaat gccgccccgc cggcattgcc
     8521 gatcagctcg ccggcagcgc gagcgcggcc ctggcgcggc gcgtccttgt cccggctttt
     8581 tcccacccgt gtcttcgcca tttggacgga gcatgccata ggccgcccat gcgcgccaat
     8641 gtcgccgagc tgctgctcca acattatgtg gataagtccc gctcccttcc gtggcggtcg
     8701 ccgccggggt tccctcctcc cgatccgtac cgggtgtggc tcagcgaggt gatgctccag
     8761 cagacgaccg tggcggcagt cgctccccgt ttcgagcggt tcgtccgccg atggccgacg
     8821 gtggaggcgc tcgccagtgc ctccgacgag gaggtgctta gcgagtgggc ggggctcggc
     8881 tattacgccc gcgcgcgaaa cctcatcgcc tgcgctcgca aggtcgcttc ggccggcgga
     8941 tttcccgaca ccgaggcgga tcttcgagcg cttcccggaa tcggcgatta tactgctgcc
     9001 gcgatcgcgg cgatagcgtt tggccgaagt gcggtcgtgg tcgactccaa cgtggaacgt
     9061 gtctcggcgc ggcttaacgg ctttacccgc ccaaccaagg cgcagatccg ctcggcggta
     9121 gcgtcgatta ctccaggcaa cagagcaggc gacttcgcgc aggcgatgat ggacctgggg
     9181 gcgaccgtct gccggccgcg agcgcccgat tgccacaatt gcccgttgca agacggctgc
     9241 tccgcttacg caagcggtgc tccggagcag ttccccgcgc gcccggcgaa gaaggagaag
     9301 ccggcccgtc atggagtcgc ctggtggatc gagcgcgatg gagcggtgcg gctggtccgc
     9361 cgccccggca gaggcctgtt gggcgggatg gcggcgcttc cgggcagtga ctggaccgcc
     9421 gacaagccgg aaatcgcggc accggtcctc ggccgggtcc gacacgtttt cacccacttc
     9481 accctcgatc ttctcgtcgt tcggcacgcg ccaatcgagg agggctggtg gcaaccgctc
     9541 tcaacgatcg gcgacgcagg gcttccgacc ctttatcgtc gagccgccga ttcggtcctg
     9601 gacggaaggc gcaagcttgc ggcctgagcc atttttttgc ggtcccggcc tcgaccgcgg
     9661 agattccgct agagccgatt ccgatcggct cgctcaattc gccgtcgccc cggcggctag
     9721 gcagctagtc tggaaggaag ggctcccggc gatcggctcc gacggctcgc tccagtggga
     9781 cgaggttatc cgtcccgaac ttttcctggg ccttgaagga caatcacccc gattttcggc
     9841 gctgcaggaa acgatcgccg ccggtccggc cgtgttctca ctgcttggca acctgtcccc
     9901 atccgacgcg ccattgttcg cagctgcgct aagcctcgcg cgctggcatt cgactcatcg
     9961 gttctgcgca aactgcggcg cagcgagcgg gattgtccgg ggcgggtggt cgaggcgctg
    10021 cggctcctgc ctggccgagc attatccgcg agtcgaccca gtcgtgatca tgcttgccga
    10081 gcacgatggg cggctgcttc tcgggcggca gcaccattat cccccgaatc gctattcggc
    10141 gctggctggg ttcgtcgaag tcggcgaatc gatcgagcag gccgtagccc gcgaacttgc
    10201 cgaggaagcg ggaatcgaag tcaccgaagt cacttacgtc gccagccagc cgtggccgtt
    10261 cccttcatcc atgatggtcg gatgcacagc tcgtgcgctc gatgaccggc tgacgataga
    10321 tttcagcgag ctggaggacg cccgctggtt cacccgcggc gaagtcgctg ccgctgtcca
    10381 aggacgagcc ggtgcgccgt tccaggcccc gccgccccac gcgatcgcgc gaactttgct
    10441 ggagcattgg ctcgccgctt gaagaagccg aacggggttc gtaaagggcg gccacatcac
    10501 gctttcggca tgtcgccgca ggggattcaa tggacgaccg attcaacacc atcgccggct
    10561 gggttctgtt cgccggaatc gtcgccttgg gcggctcgat cgtcgccggc gaggcgttcc
    10621 attcggagcg gccggaaacc atgggctacc ccatcgaagg cgtcgaggta gaaggcgaag
    10681 gcggcgaagc cgagcagccg atcgaattct tcctggcaag tgccgatccc gccaagggcg
    10741 agcaggtgtt caagaaatgc gccgcctgcc acaatgccga caagggcggc gcaaaccagc
    10801 tcgggccgaa cctttggaac gtgatgggag agccgatcgg caagggcaag ggcttcccct
    10861 tctccagcgc tctcgcggac aagggcggga cctgggactg gcacagcatg agcgaatggc
    10921 tgaaaagccc gaaatcgttc gcgcccggca cgaagatgac ctttgccggc ctgggtagtc
    10981 ccgaagaccg cgccaatgtg atcgcgttcc tgaaccagca cagcgattcg ccgcttccga
    11041 tgccggcagc tccggccgcg ccggcgggca gcgaagcggc gggcggagac gcggacactg
    11101 cagccgcggc cgccgagggg gaccaggccc agaaggaacc ggtgctcgac aacaccgctg
    11161 ccgacgtgaa gggcggcggc gaggcggccc agcccaacca atagccgccg gaccgctgct
    11221 tattcgggcg gcgccgtttg gattcggggc ggatcgggat ggcgctcgta gaagcgcacg
    11281 acatggttcc acgcttcctg cggatcctcg ctccagtgga tgaggtcgag gtcgtgcggc
    11341 gcgatcaccc cttcctcggc aagcgcttcg aaatcgacca cccggttcca gaattccctt
    11401 ccgaacaaca ggatcgggag cggccgcacc ttgcccgtct ggatcagggt cagaagctcg
    11461 aaaaattcgt cgaacgtgcc gaatccgccc gggaagactg cgaccgcgcg ggcgcgaagc
    11521 aggaaatgca tcttgcggag cgcgaaatag tggaactgga agcttagctc gggggtgaca
    11581 taggtgttcg ggagctgctc gtgcggaagc acgatgttga ggccgatgct gtccttgccc
    11641 tcgtcggcgg cgccgcaatt ggcgccctcc atgatcgacg gcccgccgcc cgagcagacg
    11701 acgaaatgcc gcatcccctc ctcgtcgcac tcgcagcggc tggcgagccg ggccagctct
    11761 cgcgcttttt cgacataagg cgactttgcc ttgagccgct cggcgacccg gcgctggtcg
    11821 tcgttggtgg ccgcctcgac cagcgcgtcg gccttcgacg gatgcgggat ccgggccgag
    11881 ccgtagaaga cgaaggtcga ggcgatcttc gcttcctgga gcaagagctc gggcttcaac
    11941 agctcgagct ggaaccggac cggccgcaaa tcctcgcgca ggagaaagtc catgtcctgg
    12001 aaggcgagct tgtaggcgtc gctctccgtt tgcgggatcg acgggacgtg ccgggccgac
    12061 tgggcgtcga ccttcgaggt cgggaaaatc cgtttgggcg gaatcgagtc agccattcgc
    12121 ccgaggctct agccgagcgt ggttgcaagc ccaagagggt cagtcggcgg cctcccgtcg
    12181 cggcgcgctc cagtcgatcc ggcgggtcgc gtacatcacg cctgcaagcg cagcgaacag
    12241 gagcagcgag ccgatcagca gcgaataggc ttcgaggctg agcaggatgt agagcacggc
    12301 ataaaggccc acgagcagcc cgccgatgaa ccaggcgcgc ctccagcttc cgagcaccgc
    12361 ggccgaatag gccgtgttga gccccgcgat tgcagccgag gcgagcacat aggccggcgt
    12421 gaagccgatc acctcggcaa gcgcgagcag gagcacgaag aacaggatca gcgccgcgcc
    12481 catcaggaga tattcgaccg gcgaaacccg caccccggcg atgacgtcga acatcagcag
    12541 cgcgaggaag gtgaagccga tgaacaggaa accatacttc gtcgcccggt tgacctgcga
    12601 atagagatcg accggctgga tcaggctgat cgccgcagtc tgcaccggcc cggatgcgcg
    12661 ggtgacgtcc atcggcgccg caggaaccgt agtcctggac ggaggcgtga ttcgatcgac
    12721 cggcggggcc gcgccggctt cgccagtgct caccagcgaa cgcccgagcg cgagattgcc
    12781 gacccggtag gtggcgctga agccgtcgtc gccgacccgg cggtcggcgg ggaggaactc
    12841 gccggcgaag ctcgggtgcg gccaggacga gcgcaccgtc cagcgggttt cgccggcatc
    12901 gggcgccagg gtcagggagc tattgccgcg gaaattgtag gcgaaatcga ccgcgagcgg
    12961 cgccgactga agccccgccg cgtcgatcca cgcgaagaag ccgcgcccgc ccccgcttcc
    13021 gccgccgggc tgcagccgaa gcggccttcc gccgacggtg acgctgggat tggcggcgag
    13081 cccgcgcggg tcgcttagcc cgaatcgaag ctcggcgcgg gcgaggtcca tcttggccgg
    13141 atcgaccccg gtccgggcaa ggtcgggcgg aaaggcgaat cgcgcctgtc cctcgacctt
    13201 ggcgtcgtaa acgacggcct cgtagatcga gcgcttgcgg acttcgggat tgatggttgt
    13261 ggaaagcccg atggcctcgg gagcgagggt cagttcgcgc atcacctcgt tcgatcgggt
    13321 gacactctgg ccgttctgga cgacggtttc ggtcgcggtc gcgcggtagg ggatgaccag
    13381 caccgggccg gtcatcgcct gcggcccgcc ccagccggcg gtgatcgagg cgctcgcctg
    13441 ttccgactgg ctctggcggt cgtagacgag cagccacacc gagaagagcg ggatcgccag
    13501 cgcgaagccg acgacgatcg ccaggaacag cttgaaggcg gggcttcgaa atccgtcggt
    13561 cagaggcacg cgcagtctcc acaagttgcc gtggcgccac catggaccag cgcgcgtccc
    13621 gcgtcatgag cgacttgtga ggaattgctg aaatgccgcg cctcgccaaa gcccgccctc
    13681 gcctcacgct tcggatttgc attcccttgc ccgcccgcta gagccgcgcc gaatgtccga
    13741 cgcgcccgaa aagcccgact accggccgac cgtattcctt ccgaagaccg actttccgat
    13801 gaaagcgggc cttccacaga aggagccggc gatcctcgcc ggctgggagg agcaggggct
    13861 gtacggtcag gttcgcaaga gccgcgccgg ccgcgacaag ttcatcctcc acgacgggcc
    13921 gccctacgcc aacggcgata tccacatcgg ccatgcgctc aaccacgtcc tcaaagacat
    13981 ggtggtgcgg acacagacct tgctgggcaa ggacagccct tacgttcccg ggtgggactg
    14041 ccacgggctt ccgatcgaat ggaaggtcga ggagcagtat cgcaagaaga agctcaacaa
    14101 ggacgaggtg ccggtaaagg aattccgggc cgagtgccgc gcctacgccc agcattgggt
    14161 ggacgttcag cgcgagcagc tcaagcggct ggggatcggc ggcgattggg ccaacccgta
    14221 cctgacgatg cagtatgaca gcgaggcgac gatcgtctcc gagctgttca agttcgccga
    14281 gacgggccag ctctaccgcg gcgccaagcc ggtgatgtgg tcgccggtcg agaagaccgc
    14341 gctggccgag gccgagatcg aatatgagga catcgtctcg acgcagatcg acgtcgggtt
    14401 cgagatcgtc gagagcccga ttccggagct ggtcggcgcc catgcggtgg tttggacgac
    14461 gactccgtgg acgatcccgg tcaaccaggc gatcgcttac gggccagagg ttgattacgt
    14521 gctcattgag gggacattcg gcgacgatac gccggatgaa acca
//
LOCUS       DATAKH010000046         5783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_1042,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000046 DATAKH010000000
VERSION     DATAKH010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5783
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1042"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VHN55_01740"
     CDS             complement(<1..398)
                     /locus_tag="VHN55_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020818691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6766 family protein"
                     /protein_id="HEX2802695.1"
                     /translation="MKFKTKTILKGYAYAWITLGFFLISLILHWWFGWNAFVDEASEH
                     GQSAQVGTYVTQMLRDTFENWQSEFLQLLWQVVGLAYFLYLGSPSSHENDDRLEAKVD
                     ALLHFHGDKGKEIIVDLDKHFMRHPRDPRPT"
     gene            complement(488..1366)
                     /locus_tag="VHN55_01745"
     CDS             complement(488..1366)
                     /locus_tag="VHN55_01745"
                     /inference="COORDINATES: protein motif:HMM:NF012703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEX2802696.1"
                     /translation="MSDWPNLSELLIDDGDTPIGLVGAPLAAGSVTPGGCDKAPALLR
                     RTLKRIGRYDVAMARSVFTPVRDRGDVDLGGMTIEEGTGPIREAVAASLAGHALTLVV
                     GGNNAITRPVVQALDMPLDKVGLVTLDAHFDMRELHEGLSNGNPVRALIEDGLPGSNI
                     AQIGIASFANTAKMHRDALAAGNLVISIDAVRRDGIGSAIDTALDHLSGCDAIVIDCD
                     IDVIDRAQMPGAPGARPGGMDVADFFWAVRAVAGVKRVRAIDLTEWDPSLDSTDLSAL
                     TAARWMAECIAGFEAR"
     gene            1424..2635
                     /gene="hutI"
                     /locus_tag="VHN55_01750"
     CDS             1424..2635
                     /gene="hutI"
                     /locus_tag="VHN55_01750"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010339115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HEX2802697.1"
                     /translation="MWDRLLTDCRIATMEGAPGNPLGIIENGAIGIQDGRIVRVGTRT
                     DLAGNRAGEVLPLGGAWVTPGLIDCHTHLIFGGNRAGEHAMRRAGKTYQEIAEAGGGI
                     ASTVRATRDSSEAELLASAAMRLDALMKGGVTTVEIKSGYGLDVEGELRMLRCAKALA
                     ASEAVRVVPTLLALHALPADWKDRRIGYVSMIIDQLIPAAAEAGLADSVDAFCEDIAF
                     TPDEVERVFNAAQERGLRVKLHAEQLSNQNGAALAAKFKALSADHLEHLDETGAKAMA
                     EAGTVAVLLPGAFYALQESRKPPVEMLREHGVRMAVATDCNPGTSPLLSPTLAMNMAC
                     TLFGLTPEEALAGMTINAARALGLEQEVGTIAPGKAADLCVWRLESLAELGYWIGFPG
                     PERRIYAGDDR"
     gene            2632..4296
                     /gene="hutU"
                     /locus_tag="VHN55_01755"
     CDS             2632..4296
                     /gene="hutU"
                     /locus_tag="VHN55_01755"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HEX2802698.1"
                     /translation="MTADRRDNSRHIRARRGPEIMAKQWTTEAAVRMLQNNLDDEVAE
                     DPQNLVVYGGIGRAARNWECFDKIVETLERLDGDQTLLVQSGKPVGVFRTHEDAPRVL
                     IANSNIVPKWANWETFNQLDRAGLMMYGQMTAGSWIYIGSQGIVQGTYETFVEMGRQH
                     YGGDLSGKWILTAGLGGMGGAQPLAAVMAGAHCIAIEVQESRIEKRLETRYVDHRATS
                     INEALEIIRAAKEPTSVGLLGNAAEILPQMLARGIRPDAVTDQTSAHDPANGYCPAGW
                     SVAKWREMRERDPAAVAEAARQSIARHVEAMLAYKDMGVPTFDYGNNIRQEAKDMGVT
                     HAFDFPGFVPAYVRPLFCRGIGPFRWAALSGDPEDIYRTDQKVKELIPGDPHLHRWLD
                     MARERIAFQGLPARICWVGLGQRHRLGLAFNEMVAKGEVSAPIVIGRDHLDSGSVASP
                     NRETEAMKDGSDVVSDWPLLNALLNTASGATWVSFHHGGGVGMGYSQHAGMVIIADGS
                     DDAARRLERVLWNDPGTGVMRHADAGYEDAIACAREMGLDLPMVNS"
     gene            4293..>5783
                     /gene="hutH"
                     /locus_tag="VHN55_01760"
     CDS             4293..>5783
                     /gene="hutH"
                     /locus_tag="VHN55_01760"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HEX2802699.1"
                     /translation="MKLDPENVTLDQLRRLWDGEGARLDDASMQRIANAAASVERIVA
                     AGDTVYGVNTGFGLLANTRIPDDRLAELQTNLILSHSAGLGDPLPRHVSRLMIALKLL
                     GLGRGYSGVRPGVVEALQALLERDAIPVIPSQGSVGASGDLAPLAHMTAALMGYGSID
                     LGGQVLPARDALSRLDMEPLQLGPKEGLALINGTQMSTAVALDALFTAERVFSAAIAA
                     GALSVDALKGSVKPFDARLSELRGQPGQIRVAAALRGLLDGSGIVASHARCGRVQDPY
                     SFRCQPQVMGASLDLLANAARTLTSEAGAVTDNPIVFPDEDIAISGGNFHAQPVAFAA
                     DTIAMALCEVGSISERRTAVLVDPKMSGLPPFLVENSGLNSGLMIPQVTAAALVSENK
                     SLAHPASVDSIPTSAGQEDHVSMAPIAARKATQIARNAAGVVAVELIAAAQGVDFHAP
                     LKTSAKLQALHSNVRELTPRFVSDRYWADDMAAVQETVLGGGIATES"
BASE COUNT         1017 a         1914 c         1922 g          930 t
ORIGIN      
        1 gtcggccgcg gatcgcgcgg gtggcgcatg aaatgcttgt cgagatcgac gatgatctcc
       61 ttgcccttgt cgccgtggaa atggagcaag gcgtcgactt tggcctccag ccggtcgtcg
      121 ttttcgtggc tgctcggcga cccgagatag aggaaataag cgaggccgac gacttgccac
      181 agaagctgca ggaattcgga ctgccagttc tcgaacgtgt cgcgaagcat ctgcgtcaca
      241 taggtgccga cttgggctga ctggccgtgt tcgcttgcct cgtcgacgaa cgcgttccac
      301 ccgaaccacc agtgcaggat tagcgagatg aggaagaagc cgagcgtgat ccaggcatag
      361 gcatagccct tgaggatcgt cttggtcttg aacttcactg gaacaacctc ccgatgaatt
      421 ctcgggagca gcaacgcacg gcgcgcacgt gagcctcaaa ggcgctgtaa cgctgcacaa
      481 aaaaacgcta gcgcgcttcg aaccccgcaa tgcattccgc catccagcga gcggcagtca
      541 gcgcgcttag gtcggtggaa tcaagagacg gatcccactc ggtgagatcg atcgcacgaa
      601 cgcgcttcac gcccgcgacc gcacgcaccg cccagaagaa atcggccaca tccattcctc
      661 cggggcgggc gcccggcgcg cccggcattt gcgcacgatc gatgacgtcg atgtcgcagt
      721 cgatgacgat tgcatcgcaa ccagacaagt gatcgagcgc ggtgtcgatc gccgacccga
      781 tgccgtcgcg ccgcactgcg tcgatgctga tgaccaggtt cccagcagcg agggcgtcgc
      841 ggtgcatctt cgcggtgttc gcgaagctcg cgatcccgat ctgggcgatg ttgcttccgg
      901 gcagaccatc ctcgatcagc gcgcggaccg ggttgccgtt gctaaggcct tcatggagct
      961 cgcgcatgtc gaagtgggcg tcgagcgtga ccagcccgac cttgtccagc ggcatgtcga
     1021 gcgcctggac gaccgggcgg gtgatcgcat tgttgccgcc gactaccagt gtcagcgcgt
     1081 gaccggcgag gctcgcggcg acggcttcgc ggatcggacc ggtgccctcc tcgatcgtca
     1141 tgccgccgag atctacgtcg ccgcggtcgc ggacgggcgt gaacaccgag cgggccatgg
     1201 cgacgtcgta gcggccgatg cgcttgagcg tccggcgcag cagagcgggt gccttgtcgc
     1261 accctcccgg ggtaaccgat cccgcagcaa gcggcgctcc cacgagcccg atgggcgtgt
     1321 cgccatcatc gatcagaagc tcggacaggt tgggccagtc gctcatggct ttgccctatc
     1381 aggggcagtc gcctaaggcc aaatcccaag ggaaaagacg agaatgtggg atcgcctgct
     1441 taccgactgc cgaatcgcga ccatggaggg tgcgcccggc aatccgctcg gaatcatcga
     1501 aaatggcgcc atcggcatcc aggacggccg gatcgtccgc gtcggcacgc gcaccgacct
     1561 cgccggcaac cgcgccggcg aagtgcttcc gctcggcggt gcgtgggtga cgcccggcct
     1621 catcgactgc cacacgcacc tgattttcgg cggcaatcgc gccggcgagc atgcgatgcg
     1681 gcgggccggc aagacgtacc aggaaatcgc ggaagccggc ggcgggatcg catcgacggt
     1741 gagggccacg cgcgattcct ccgaagccga attgctcgcg tcggcggcga tgcggctcga
     1801 cgcgctgatg aagggcggcg tcacaacggt ggaaatcaag tcgggctacg gtctcgacgt
     1861 cgagggggag cttcggatgc tccgctgcgc caaggcgctg gcagcgagcg aggcggtccg
     1921 ggtcgtcccg acccttctcg cccttcacgc gcttcccgcc gactggaagg accggcgcat
     1981 cggctatgtc tcgatgatca tcgatcagct gatcccggcg gcggccgaag ccgggctcgc
     2041 cgactcggtc gacgcctttt gcgaggatat cgctttcact cccgacgagg tcgagcgggt
     2101 cttcaatgcc gcgcaggagc gcggccttcg ggtcaagctc cacgccgagc agctttccaa
     2161 ccagaatggc gccgcgctcg cggcgaagtt caaggcgctg tccgcggatc atctcgagca
     2221 tctcgacgag acgggcgcca aggccatggc agaggcaggc accgtggcgg tgctcctgcc
     2281 cggcgccttt tacgcgcttc aggaaagccg caagccgccg gtggaaatgc tccgcgagca
     2341 cggcgtgcga atggcggtcg cgaccgactg caaccccggc acatcgccct tgctgtcgcc
     2401 gaccttggca atgaacatgg cgtgcacctt gttcggtctc actccggagg aagcgctggc
     2461 gggaatgacg atcaacgccg cgcgagcgct ggggcttgag caggaggtcg gcaccatcgc
     2521 accaggcaag gcggctgacc tgtgcgtctg gcggctcgaa agcttggctg agctcggcta
     2581 ctggatcggc tttccgggac ccgagcggcg gatctacgcg ggggacgata ggtgacggcc
     2641 gaccgacgcg acaacagccg ccacatccgc gctcgccgcg ggcccgaaat catggcgaag
     2701 cagtggacca ccgaagcggc ggtccggatg ctgcagaaca atctcgacga tgaggtcgcc
     2761 gaggacccgc agaacctcgt cgtctatggc ggcatcggcc gcgcggcgcg caactgggag
     2821 tgtttcgaca aaatcgtcga gactctggag cggctcgacg gggaccagac tttgctcgtc
     2881 caatcgggca agccggtcgg cgtgttccgc acccacgagg acgccccgcg ggtgctgatc
     2941 gccaattcga acatcgtgcc gaaatgggcg aactgggaga cgttcaacca gctcgatcgc
     3001 gccggattga tgatgtacgg ccagatgacg gccggaagct ggatctacat aggctcgcag
     3061 ggcatcgtcc agggcaccta cgagacgttc gtcgagatgg gccgccagca ttatggcggg
     3121 gacctttcgg gcaaatggat actgacggcc gggcttggcg ggatgggcgg cgcccagccg
     3181 ctcgcggctg tcatggccgg cgctcactgc atcgccatcg aggtgcagga aagccggatc
     3241 gagaagcggc tcgagacccg ttatgtcgac catcgagcga cgagcatcaa cgaggcgctg
     3301 gagatcatcc gcgcggcgaa ggaacccacc agcgtcggcc tgctcggcaa tgccgccgaa
     3361 atcctgccgc aaatgcttgc gcgcgggatc aggcccgacg cggtcaccga ccagaccagc
     3421 gcccacgatc cggccaacgg ctattgcccc gcaggctgga gcgtcgccaa gtggcgggaa
     3481 atgcgcgagc gcgatcccgc cgccgtagcc gaggctgcca ggcagtcgat cgctcgccac
     3541 gtggaggcga tgctcgccta caaggacatg ggcgttccca ccttcgacta tggcaacaac
     3601 atccgccagg aagccaagga catgggcgtc acccacgcct tcgacttccc cggcttcgtc
     3661 ccggcttacg tgcgtccact gttctgccgc ggcatcgggc ccttccgctg ggcggcgctg
     3721 agcggcgacc cggaggacat ctaccggacc gatcaaaagg tgaaggagct gatccccggc
     3781 gaccctcacc tccaccgctg gctcgacatg gcgcgcgagc ggatagcctt ccagggcttg
     3841 ccggcgcgca tctgctgggt tggcctcggc cagcgccacc gcctcggcct cgccttcaac
     3901 gagatggtgg cgaagggcga ggtctcggcc ccgatcgtca tcggccgcga ccatctcgac
     3961 agcggcagcg tcgcctcgcc caaccgcgag acggaagcca tgaaggacgg aagcgacgtc
     4021 gtttccgact ggccgcttct caatgccttg ctcaacactg cctcgggtgc gacctgggtt
     4081 tcgttccacc acggcggcgg ggtcggaatg ggctattcgc agcacgccgg catggtgatc
     4141 atcgccgacg gcagcgacga tgccgctcgg cggctcgagc gagtgctctg gaacgacccc
     4201 ggcacggggg tgatgcgcca cgccgacgcg ggttatgagg acgcgatcgc ctgcgcccgc
     4261 gaaatggggc tggacctgcc gatggtgaat tcgtgaagct cgaccccgaa aacgtcacgc
     4321 tcgaccagct gcgccgcctt tgggacggcg aaggcgctcg gctggacgac gcgtcgatgc
     4381 agcgaatcgc caatgccgcc gcttcggtgg aacggatcgt cgcggccggc gacaccgtct
     4441 atggagtcaa caccggtttc ggtcttctcg ccaatacgcg aatccccgac gaccggctcg
     4501 ccgaactcca gaccaacctg atcctgtcgc acagcgccgg tctcggcgat cctctcccgc
     4561 gacatgtgtc gcggctgatg atcgcgctca agctgctcgg tctcggccgc ggctactcgg
     4621 gcgttcgacc gggggtggtc gaggcgcttc aggcgctcct cgaacgtgac gcgattcccg
     4681 tgatcccgag ccagggaagc gtcggagcat cgggcgatct cgcgccgctc gcgcacatga
     4741 cggccgccct gatgggctac gggagcatcg atctcggcgg gcaagtcctg cccgcccgtg
     4801 acgcgctgtc gcggctggac atggagccgc ttcagctcgg gccgaaggaa ggcctcgccc
     4861 tcatcaacgg cacccagatg tcgaccgccg tggcgctcga cgctttgttc accgccgagc
     4921 gcgtctttag tgctgcgatc gctgccggcg ccctatccgt tgatgcgctc aagggatcgg
     4981 tgaagccgtt cgacgcgcgc ctttcggagc ttcgcgggca accgggccag atccgggttg
     5041 cggccgcgct gcgcggcctg ctcgacggca gcggcatcgt cgccagccac gcccggtgcg
     5101 gccgcgtgca ggatccctac agcttccgct gccagccgca ggtgatgggc gccagtctcg
     5161 acctgctggc gaatgctgct cggacgttga cgagcgaagc aggcgccgtg accgacaatc
     5221 cgatcgtgtt cccggacgag gacatcgcca tctccggcgg caatttccac gcgcagccgg
     5281 tcgccttcgc tgccgacacg atcgcgatgg cgctatgcga agtcggctcg atctcggagc
     5341 ggcgaacggc tgttctggtc gatcccaaga tgagcggact tccacccttc ctggtggaga
     5401 actccggtct caactcgggc ctgatgatcc cgcaggttac cgccgccgcg ctggtcagcg
     5461 aaaacaagag cctcgctcat cccgcaagcg tcgattcgat ccccacatcg gcgggccagg
     5521 aggaccatgt ctcgatggcc ccgatcgccg cccgcaaggc gacccagatc gcgcgcaatg
     5581 ccgccggagt ggtcgcggtc gagctgatcg cggccgcgca gggcgtcgac ttccacgcgc
     5641 cgctcaagac ttcggcgaaa cttcaggcgc tgcactcgaa tgtgcgcgag ctaacgccgc
     5701 ggttcgtatc ggaccgttac tgggcagacg acatggcggc ggtccaggaa acggtgctcg
     5761 gcggcggcat tgccaccgaa agc
//
LOCUS       DATAKH010000047         2300 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_24638,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000047 DATAKH010000000
VERSION     DATAKH010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24638"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            52..1827
                     /locus_tag="VHN55_01765"
     CDS             52..1827
                     /locus_tag="VHN55_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007165927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEX2802700.1"
                     /translation="MAGPGKSRAKLGNLMLVWRFARRYPRQIAGALFFLILSSTATLA
                     IPYGFKRVIDRGFGSGAASPEAVAQAFHYLLMIVVILAAATALRFYFVSWLGERTVAD
                     LRLAVQKNLLTLPPRFFEENRPSEIASRLTADTAILEQVVGSSVSIALRNLATGVGGI
                     IYLFVLSPKLAGMLLIGIPVVFGPVILFGQRIRALSRASQDRIADVGSTVSETLGAMK
                     VVQAFGQEGRELGRFGGTVEQAFGVARSRFRMRAVMTFTVIALVFGAIVLILWEGASD
                     VAAGRMSGGSIAAFVFTGVLVGGAFGALTETYGDLLRGSGAAARLHELMIAEAEIHAP
                     ADPVALPEPAVGSLRFDGVTFRYPTRLEDKALHDLSLSIAPGETVAVVGPSGAGKSTL
                     FQLALRFYDPQEGRVLLDGVDVRDADPAAVRSRIALVPQETIIFAASARDNIRYGRWD
                     ASEQEIVDAARAANADEFLEALPDGYDSFLGEGGARLSGGQRQRIVIARALLRDAPLL
                     LLDEATSSLDAHSEKLVQEALERLMKTRTTMVIAHRLATTRAADRIVVMEHGRIVEEG
                     THASLNKANGLYASLARLQFAGQAA"
     gene            1867..>2300
                     /locus_tag="VHN55_01770"
     CDS             1867..>2300
                     /locus_tag="VHN55_01770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802701.1"
                     /translation="MRLRVVFGFAAAALAVDFLGVDLLAVDFFAVERFAVDRFAVDFL
                     VAGFFAVERFAPAEAPPPPVARCSSIGHLPDMIRCAASDTASAISEPSLVALDITDFA
                     ALSALSAASIPASLIAFRAFGLALIAAAAAARPAASISLLIAA"
BASE COUNT          321 a          769 c          767 g          443 t
ORIGIN      
        1 ggtttccagg ccacgttgag gacactggca gtggctgcta ggcgcggcgg catggcgggg
       61 cccggaaagt ccagagcgaa gctcggcaat ttgatgctcg tgtggcggtt cgcccgccgc
      121 tacccgcgcc agatcgccgg agcgctgttc ttcctgatcc tgtcgtcgac ggcgactctt
      181 gccatccctt acgggttcaa gcgcgtgatc gaccgcgggt tcgggtccgg cgctgccagc
      241 ccggaagcgg ttgcccaagc cttccattac ctgctgatga tcgtcgtcat cctcgccgca
      301 gcgacggcgc ttcggttcta cttcgtgtcg tggctgggcg agcgcacagt ggccgatttg
      361 aggctcgctg tgcagaagaa cctgctcacc ctgcccccgc gcttcttcga ggagaaccgc
      421 ccgtcggaaa tcgcgtcgag gctgaccgcc gataccgcga tcctcgagca ggtcgtcggc
      481 tcgagcgtct ctatcgcgct gcggaacctt gccaccgggg tcggcgggat catctatctg
      541 ttcgtgctct cgccaaagct cgccgggatg ctccttatcg gaatcccggt cgtgttcggc
      601 cccgtgatcc tgttcggaca gcggatccgg gcgctcagcc gcgcctcgca ggaccggatc
      661 gccgacgtcg gctcgacggt gtcggaaacc cttggtgcga tgaaggtcgt ccaggctttc
      721 ggccaggaag ggcgcgagct cggccgcttc ggtggaactg tcgagcaggc gttcggagtt
      781 gcgcggagcc gcttccggat gcgcgcggtg atgaccttca ccgtcatcgc tttggtattc
      841 ggagcaatcg tgctgatcct gtgggaaggc gccagcgacg tcgccgcggg acggatgagc
      901 ggcggttcga tcgccgcctt cgtgttcaca ggagtccttg tcggcggagc cttcggggcg
      961 ctgacggaga cctacggcga cctgttgcgc gggtccggcg cagcggcgcg ccttcacgaa
     1021 ttgatgatcg ccgaagccga aattcacgcg cccgccgatc cggtggcgct gcccgagccc
     1081 gcggtcggca gcttgcggtt cgatggcgtg acgttccgct atcccacccg gctggaggac
     1141 aaggcgcttc acgatctgtc gctgtccatc gctccgggag aaacggtggc cgtggtcggt
     1201 ccgtcagggg ccggcaagtc gaccttgttc cagctcgcgc tccgcttcta cgacccgcag
     1261 gaaggtcggg tcctgctcga cggcgtcgac gttcgcgatg cggaccctgc cgcggtaaga
     1321 agccgcatcg ctttggttcc gcaggaaacg atcatcttcg cggcatccgc tcgcgacaac
     1381 atccgttacg gccgctggga cgcgagcgag caagagatcg tcgacgccgc acgggcagcg
     1441 aacgcggacg aattcctaga ggcgcttccc gacggttacg acagcttcct cggcgaggga
     1501 ggagcgcggc tttccggcgg ccagcggcag cggatcgtca tcgcccgcgc cctcctccgc
     1561 gacgctccgc tactgctcct cgacgaagcg acttcgtcgc tcgacgcgca tagcgaaaag
     1621 ctggtgcagg aagcgctcga gcggctgatg aaaacccgaa cgacgatggt catcgcgcac
     1681 cggctggcga caacccgggc cgccgaccgg atcgtcgtga tggagcatgg ccggatcgtt
     1741 gaggaaggca cccatgccag cctcaacaaa gcgaacgggc tctacgccag ccttgcccgg
     1801 ctgcagttcg ccggacaggc cgcctagctt ttcttcgccc gggtcccgct cttcctggca
     1861 gcggtcgtgc gcttgcgcgt ggtcttcggt ttcgcggcag cggcgctcgc cgtggatttc
     1921 ctgggggtcg atttgctagc ggtcgacttc ttcgcagtcg agcgttttgc cgtcgaccgc
     1981 ttcgcggtcg atttccttgt tgccggcttc ttcgcggtcg agcgcttcgc gccagcggag
     2041 gcgccgccgc cgccagtcgc gcgctgttcg tccattggcc acttgccgga catgatccgc
     2101 tgcgccgcgt cggacaccgc ttcggcgatc agcgagccga gcttggtcgc gctcgacatc
     2161 accgacttcg ctgctttgtc ggcgctgtcc gcggcgtcca ttcccgcgtc cttgatcgcc
     2221 tttcgcgcct tcgggctggc gctgatcgcg gccgccgcgg cggcaagacc ggcggcgagc
     2281 atttccttgc tcatcgcggc
//
LOCUS       DATAKH010000048         1990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36132,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000048 DATAKH010000000
VERSION     DATAKH010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36132"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..539)
                     /locus_tag="VHN55_01775"
     CDS             complement(153..539)
                     /locus_tag="VHN55_01775"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HEX2802702.1"
                     /translation="MKRILISIAAIAAIATPAAASSQSLEGRWANSKRSVIVAVARCG
                     EGYCATVDWATAHNREKGVAPGTRVLSDLRPQGGGVYKGRAFEPKREISGSATVRQVG
                     PNTMLVKGCAVIGLICKEQRWTRVGS"
     gene            complement(605..>1990)
                     /locus_tag="VHN55_01780"
     CDS             complement(605..>1990)
                     /locus_tag="VHN55_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013833352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEX2802703.1"
                     /translation="IQGDMVHPFLKRRSGKEPVTFPCPDPEHGDPDELEKILGRTLGV
                     PIFQEQAMKVAIDAARFSAGEANQLRKAMATFRSKGNIELLQDKMVGRMVERGYDPAF
                     AQRCFDQIKGFGEYGFPESHAASFAHLVYVSSWLRWKYPAAFAAALLNSQPMGFYAPA
                     QIVRDAKEHGVEVREVDVNHSDWDCTLENGALRLGLRQVDGLHREAADRVVAGRPYAS
                     VEELQSRGRVPVHAIQRLAGADAFRSMGLDRRAALWDSRALRQAPDLPLFAFADECDE
                     GDESAPAELPAMPLAEHVISDYQTVRLSLKAHPMHFLRAHYSSQGFITAEQLKSIKDG
                     KRLSIAGVVLIRQRPGTSKGVVFITIEDETGVANLVVWPKVFERQRKIVMGARLMAVH
                     GMVQKDPDSEVIHVVAVRLEDHTGMLSHLSDDSLLPSTLEKPDHAGSWGRPPNRHPRN
                     VKIIPKSRDFH"
BASE COUNT          342 a          643 c          627 g          378 t
ORIGIN      
        1 ctcaagactt cggcgaaact tcaggcgctg cactcgaatg tgcgcgagct aacgccgcgg
       61 ttcgtatcgg accgttactg ggcagacgac atggcggcgg tccaggaaac ggtgctcggc
      121 ggcggcattg ccaccgaaag cgactggctc gactagctgc cgactcgcgt ccagcgctgc
      181 tctttgcaga tcaggccaat gactgcgcag cccttcacca gcatggtatt gggcccgacc
      241 tggcggacgg tcgccgaccc gctgatctcg cgcttgggct cgaacgcccg tcccttgtag
      301 acgccgcccc cctggggccg aaggtcgctc agaacgcggg ttccgggcgc gactcccttt
      361 tcccggttgt gggctgtcgc ccaatcgacg gttgcgcaat agccttcgcc gcagcgggcc
      421 accgcgacga tcacgctgcg cttggagttc gcccagcggc cttcgaggga ctgggaggac
      481 gcggcggcag gcgtggcgat tgccgcaatc gctgcgatgc tgatcagaat ccgtttcatg
      541 ctgacccctg taaccgctct ttgtggcagc aatggttcat cgaaattgct ctaagatgaa
      601 caacttaatg gaaatcgcgg cttttgggga tgatcttgac gttgcgcggg tggcggttgg
      661 gcggtcgccc ccagcttccg gcatggtcag gtttttcaag ggtcgagggc aacagcgaat
      721 cgtcgctcag gtgactgagc atccccgtgt gatcctccag tcgtacggca acgacgtgga
      781 tgacctcgct atcggggtcc ttctgcacca ttccgtgaac cgccatcagc cgcgcgccca
      841 tcacgatctt gcgctggcgc tcgaatacct tcggccagac gaccaggttg gcgacgcccg
      901 tctcgtcctc gatggtgatg aacaccacgc ctttcgacgt cccgggccgt tgccggataa
      961 ggacgactcc cgcgatcgac aggcgcttgc cgtccttgat cgatttcagc tgttcggcgg
     1021 tgatgaagcc ttggctggaa taatgcgcgc gcaggaagtg catcggatgc gctttcaggc
     1081 tcagccgaac cgtctggtaa tcgctgatca catgctcggc gagcggcatc gccggaagct
     1141 cggcgggtgc tgattcgtcg ccttcgtcgc actcgtcagc gaaggcgaac aagggcaggt
     1201 cgggtgcttg gcggagcgcg cgtgagtccc acaaagcggc gcggcgatcg aggcccatcg
     1261 agcggaacgc gtcggcgccg gcgagccgct ggatcgcatg caccggcacg cgcccgcgcg
     1321 attggagctc ttcgaccgag gcataaggcc gacccgcaac cacccgatcc gccgcctcgc
     1381 gatgcaatcc gtcgacctgg cgaaggccga gccgcagcgc tccgttctca agcgtgcagt
     1441 cccagtcgct gtggttcacg tccacctcgc gaacctcgac cccatgctcc ttcgcatcgc
     1501 ggacgatctg cgcgggcgcg taaaatccca tcggctgcga gttcagaagt gccgccgcga
     1561 aggccgccgg atatttccac ctgagccagc tcgacacata gaccaggtgc gcgaaactcg
     1621 ccgcgtggct ctccggaaaa ccatattcgc cgaagccctt gatctggtcg aagcagcgct
     1681 gggcgaaggc tgggtcgtag ccgcgttcga ccatccgtcc gaccatcttg tcctggagga
     1741 gctcgatatt tcccttggag cggaaggtcg ccatcgcctt cctcagctgg ttcgcctcgc
     1801 cggcactgaa ccgcgccgcg tcgatggcga ccttcatcgc ctgctcctgg aaaatcggga
     1861 caccaagagt ccggccgaga attttttcca gctcgtccgg gtcgccatgc tcgggatcgg
     1921 ggcaggggaa ggtgaccggc tcctttccgg agcggcgttt caggaaagga tggaccatgt
     1981 cgccctggat
//
LOCUS       DATAKH010000049         2246 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_8859,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000049 DATAKH010000000
VERSION     DATAKH010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8859"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..766)
                     /locus_tag="VHN55_01785"
     CDS             complement(<1..766)
                     /locus_tag="VHN55_01785"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX2802704.1"
                     /translation="MTIAVTGGTGFVGSHFIDAATAAGHEVRALARRPQRPKPSVDWV
                     DGSLDNADSLRRLVSGCDTVVHIAAVINARDPDEFERCNVDGTLAMLAAATAAGITRF
                     VHVSSLAAREPKLSRYGASKARSEDLVQRSGLDWAIVRPPAVYGPGDRETLELFKMAN
                     LRLMLLPPAGRVSLLNVADLARLLLVLAEKGEPKGIVVEPDDGRQRGWSHKELAEAIG
                     RAVGRRNLSLSVPKAMLRLGAVADQLVRRERAKLSAD"
     gene            complement(763..1806)
                     /gene="obgE"
                     /locus_tag="VHN55_01790"
     CDS             complement(763..1806)
                     /gene="obgE"
                     /locus_tag="VHN55_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEX2802705.1"
                     /translation="MHFLDQAKIYASSGAGGPGAVSFRREKFIEFGGPDGGDGGKGGD
                     IVFEAVQGLNTLIDFRYTQHFRAPRGKGGAGRNKTGAGGKDLVIHVPVGTQILADDEE
                     RSLIADLTRQGQRVVLLKGGMGGRGNASYKSSTNRAPRQHQTGEDGEEMWVWLRLKLL
                     ADVGLVGLPNSGKSTFLNAVTNATAKVGDYPFTTLRPQLGVVRHKGREFVLADIPGLI
                     EGAAEGAGIGDRFLGHVERTRLLLHLVDSAGEDPGGAWRTIRDEIARYGAGLADKPEV
                     LALSRCDLADPERIEEAKAELKEIGGREAFTISAATGDGLDALLDQIVERLGPEPETT
                     ALEDGDDAAWSPL"
     gene            complement(2009..>2246)
                     /locus_tag="VHN55_01795"
     CDS             complement(2009..>2246)
                     /locus_tag="VHN55_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802706.1"
                     /translation="TLHFSPVFLVNLRMFADAGRFFPASPWAKGLRFSIDVVNLTNGR
                     QRVRDSSGHTPLQYQPAYRDALGRTIEFEIRKVF"
BASE COUNT          376 a          748 c          749 g          373 t
ORIGIN      
        1 ggtcagccga cagttttgcc cgctcgcggc gcaccagctg atcggcgacc gcgcccagcc
       61 tgagcatcgc cttgggcacc gacagcgaga ggttgcgccg gccgacggcc cggccgatcg
      121 cctcggcgag ctccttgtgg ctccagccgc gctggcggcc gtcgtcgggc tcgacgacga
      181 ttcccttggg ctcccccttc tccgctagga cgagcaggag ccgggcaagg tcggcgacat
      241 tgagcagcga tacccgaccg gccggcggca gcagcatcag cctgagattc gccatcttga
      301 acagctcgag cgtttcccgg tcgccgggac cgtagacggc cggagggcgg acaatggccc
      361 agtcgaggcc ggagcgctgg accaggtctt cggaccgcgc cttggacgcg ccgtaacgcg
      421 acagcttcgg ctcccgggcg gcgagcgacg atacgtggac gaagcgcgta attccggcgg
      481 cggtcgccgc agcgagcatg gcgagggtgc cgtcgacgtt gcagcgttcg aattcatccg
      541 ggtcgcgggc gttgatgacg gctgcgatat gcacgacggt atcgcagccg ctgaccagcc
      601 ggcgaagcga atcggcgtta tcgagagagc cgtcgaccca gtccaccgac ggtttcgggc
      661 gctgcggccg ccttgcaagc gcccggacct catgaccggc cgcggtcgcg gcatcgatga
      721 agtgcgagcc gacaaagccg gtaccgccgg tgacggctat tgtcacagcg gcgaccaggc
      781 ggcgtcgtcg ccatcctcga gggctgtcgt ctcaggttcc ggcccgagcc gctcgacaat
      841 ctggtcgagc agcgcgtcga gcccgtcgcc ggtcgccgcc gagatcgtga aggcctccct
      901 gccccctatc tctttcaact cagcctttgc ttcctcgatc cgctccggat cggcgagatc
      961 gcagcggcta agcgcaagga cctccggctt gtcggccagg ccggctccgt agcgggcaat
     1021 ctcgtcgcga atggtccgcc acgctccgcc cgggtcttcg ccggcggagt cgaccagatg
     1081 aagcagcaat cgcgtgcgct cgacatggcc gaggaagcgg tcgcctattc cggcgccttc
     1141 tgccgccccc tcgatcaggc cgggaatatc ggcaaggaca aattcgcggc ccttgtgacg
     1201 gactactccg agctgcgggc gaagggtcgt gaacgggtaa tcgccgacct tggcggttgc
     1261 gttggtcacc gcgttcagga acgtcgactt gccggagttg gggaggccga ccagcccgac
     1321 gtcggcgagc agcttgagcc gaagccaaac ccacatttcc tcgccgtcct caccggtctg
     1381 gtgctgccga ggagcgcgat tggtggagct tttgtagctg gcatttccgc gcccgcccat
     1441 gccgcccttc agcagaacca cgcgctggcc ctgccgggtg aggtcggcga ttaacgaacg
     1501 ctcctcgtca tcggcgagga tctgggtccc gacgggaacg tggatgacaa gatccttgcc
     1561 ccccgcgccc gtcttgttcc ttcctgcccc gcccttgccg cgcggcgccc ggaagtgctg
     1621 ggtgtaacga aaatcgatca gcgtgttcag gccctgcacc gcctcgaaga cgatgtcgcc
     1681 tcccttgccg ccgtcgccgc cgtcgggtcc gccgaattcg atgaacttct cgcggcgaaa
     1741 gctgaccgcc ccggggccgc cggcgccgga gctcgcatag attttcgcct gatcaaggaa
     1801 atgcatggga cggatgtagg ctggcgggag gcggtgcgga agagactgcc ctcgctggcg
     1861 ccgggacgcc agcgagggag tccacgcgcg gaccttgcgg tcctgcgtga aacctttggg
     1921 cacggtgacg cgactcgcga cggccgttcc ggtacgcaat cagctacagc agaccttcgt
     1981 cttcaacaat cgccatcgca ggcgaaactt agaatacctt gcggatttcg aactctatcg
     2041 tgcggcccag cgcgtcgcgg taggcgggct gatactggag cggagtgtgt cccgatgaat
     2101 cgcggactcg ctgacgaccg ttggtcaggt tcacgacatc gatcgagaag cgcagtccct
     2161 tcgcccaggg cgaggcgggg aaaaaacgtc ccgcgtcggc gaacatccgc aggttgacca
     2221 ggaacaccgg cgaaaaatgc agagta
//
LOCUS       DATAKH010000050        16428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_1132,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000050 DATAKH010000000
VERSION     DATAKH010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 16428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16428
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1132"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /gene="bfr"
                     /locus_tag="VHN55_01800"
     CDS             <1..366
                     /gene="bfr"
                     /locus_tag="VHN55_01800"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEX2802707.1"
                     /translation="RLAEFERHESIDEMKHADRFSERILFLEGLPNFQALGRLRIGES
                     VEEILKADLEAEYEAVEMYRNGVAACEKAHDYVSRDLFAEVLKDEEGHVDAIETQFEM
                     IKSMGLQNYIQLQSEPIKE"
     gene            444..1748
                     /locus_tag="VHN55_01805"
     CDS             444..1748
                     /locus_tag="VHN55_01805"
                     /inference="COORDINATES: protein motif:HMM:NF016150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 domain-containing protein"
                     /protein_id="HEX2802708.1"
                     /translation="MATLPAETRGNRIVTLDVVRGIAVMGIFSVNVVGMAMLQFAYFY
                     PPAYGFDGFGDHLMWFLNFVLVDGKLRSLFSILFGASMLLVAEQAVKAARSPWRTHYA
                     RMIVLLVIGWLHWALLWWGDILTHYAAVGMAAFLMWKLRAKWLMVIAAVLFVIHAAPP
                     VYFFTKEIPEYYEVKRGDASPEVTKKWKERIEELTPSAERLAKDRAEHRNIATRFNAA
                     MPDFSKPISGGKVMEVLHPLDLGPLWLETIALMLLGMAGYKSGFLTGTWQNSSYRRVA
                     VFGLGVGLAVYGFLGARAWLAGFAPVEMFTATQIATPIFRPIMASGYAALIILLFRNA
                     SALRARFAAVGRMAFSNYLLCTFIGTFIFYGMGLDLYGKLSRGEAWLLVPPVWALMLL
                     WSKPWLDRFHYGPMEWAWRSLARGKLQPMRKRPAGEPLPAAA"
     gene            1752..3017
                     /locus_tag="VHN55_01810"
     CDS             1752..3017
                     /locus_tag="VHN55_01810"
                     /inference="COORDINATES: protein motif:HMM:NF016150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 domain-containing protein"
                     /protein_id="HEX2802709.1"
                     /translation="MATTSPGRILTLDVIRGIAVMGIFSVNVIDFALIQAAYLNPAAA
                     GGASGADLYLWFINHVVIDEKMRTLFSILFGASSALVFNRALAKGESGARVHYSRMAV
                     LFVLGLMHFYLIWFGDILVSYAFTGMAAYFFLRRGTKTILIWAGALLFLNAAMFSGGS
                     WYMHDVQQKVESRTATSEELKSWKGISKLSVTDPKKAEQETITHRSKWPERTARRFEK
                     QKFQPFAGLFAFFMETLGLMLIGVAGLRSGFLTGDWPRRTYIRIAAGGIAIGAIFSVA
                     SGLTLIDLGFPPWLILGANYGFGAPAHIAMALGYAALIVLMIRPGGWLTARIAAVGRA
                     AFTNYLGTSILASLIFYGDGLALFGHLSRAQAWAVAVPGIWLIMLLWSKPWLDRFTYG
                     PFEWVWRSLSRGKLQPMRRSRSAPAAATA"
     gene            complement(3014..3451)
                     /locus_tag="VHN55_01815"
     CDS             complement(3014..3451)
                     /locus_tag="VHN55_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX2802710.1"
                     /translation="MSDGQDIVDWVHFERSRTELGPGFIRILSYFREDGSKSVSDIEQ
                     AMREQSAAGLVIPAHTLKGEARQLGAEPLAKIAELIETTARFCVESRRFPDELVRDVV
                     ELRRTFEQTVEQFEKATNPLVSRNRPGPAGFGRKTGNQSFGRI"
     gene            complement(3530..4879)
                     /gene="der"
                     /locus_tag="VHN55_01820"
     CDS             complement(3530..4879)
                     /gene="der"
                     /locus_tag="VHN55_01820"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEX2802711.1"
                     /translation="MPLPTVAIVGRPNVGKSTLFNRLVGRKLALVDDRPGVTRDRREG
                     EARLLGLEFRVIDTAGYEDEDPHTLPGRMRQQTEAAVRDADVALFLIDSREGVTPLDS
                     EIARWLRVGETPVVVVANKAESRAGEAGVLDAYRLGLGDPVPLSAEHGEGVVDLFEAL
                     RPLVEKEEAPDEEPNETESATLKLAIVGRPNAGKSTLVNRMLGEERLITGPEAGITRD
                     SISLDWEWQGKPVRLVDTAGLRKRAKITDKLEKLSSADARRAIDMAEVVILLLDATRG
                     LEAQDLRIAEQVIDEGRALIVAINKWDVAESASSLFNGIKGALEDGLAQIKGIPVLTV
                     SAKTGKGIDQLLGAAFELREQWSRRIGTGELNRWFEAAVEANPPPAPGGKRIKLRFIT
                     QVNTRPPSFVVFGTRVDQLPESYRRYLLNSIRRELGVGPVPLRLTMRSPKNPFDRSR"
     gene            complement(4917..6239)
                     /locus_tag="VHN55_01825"
     CDS             complement(4917..6239)
                     /locus_tag="VHN55_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX2802712.1"
                     /translation="MNKLRIVVLVAGAIAASGCGLIKKSTKTAPVVGERISVLTTEID
                     VTVDPTTASLPMTLPAPAVNSDWSQSGGNASKSMGHVALPASIARAWQVSIGSGTSLA
                     ARLAAAPIVGNGRVYTIDTTATVRAFDARTGTGVWSTQFGTEKGNDAALFGGGVAFAN
                     GRIYATNGLGFVAALDASNGGIVWQVRPGGPMRGAPTVAGDAVYVMSQDNQLYSLKTA
                     DGSANWSQAAGLEVAGIFGVGSPAYAQGTIVAGFSSGELNAYRYENGRGVWQDALART
                     SIRTSVSSLSDVDADPVIDNGQVIAIGQGGRMVALELITGQRMWELNVAGIATPWVAG
                     DWVFVVTDDAKLMAIARATGKIRWISQLPEYRNAKNRSGRIRYVGPLLAGGRLIVAST
                     QGALMFADPQTGAVQGQSSVGASVSLPPVVANNMLYVLDDSGRLHAFR"
     gene            complement(6236..6961)
                     /locus_tag="VHN55_01830"
     CDS             complement(6236..6961)
                     /locus_tag="VHN55_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020818317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2802713.1"
                     /translation="MALTPDSPDAPNEAFLREVDEDLRRDQLEGFAKTYGKWVIAAVV
                     VFLAAVAGYLYWQDRQEKKAAAQSEELMSIYADIGNGKIEQAKKRLQPLESSDVALVR
                     SLALLSEAAIAMNANDRDTALAKFRAVAADEDVPEPYRNLALIRATTIEFDQLKPEET
                     VSRLQALAKPGNPWFGTAGELTAMAYLKQGQKDKAGRVFAAIAADRQVPDSIRSRAVQ
                     IAGTLGVDASAALPQPGQTGSSE"
     gene            complement(7083..10679)
                     /locus_tag="VHN55_01835"
     CDS             complement(7083..10679)
                     /locus_tag="VHN55_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007166209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HEX2802714.1"
                     /translation="MFLGIMRFEVRYQLRNPVFWVGIAIFFLLGFGITASENVSIGTP
                     GSVHENSPYAIAIATAILTLFYLFIVTAFVANAIVRDDSSGFAPIVRATPVSKSQIVI
                     GRFLGGLMVAWIGYLAVPVGMAIGSMMPWVDPETVGPQKLSYYAWNYALFALPNILLT
                     SALLFALATTLRSMMASYIGAVLLVMGYLVTTSIVGQKIEYRDTFALWEPLGNGALRE
                     ATRYWTQSEMNGRLVELGGTLLFNRIYAIVLGCLFLAFTIWRFSMTERAPSRRKLRKL
                     AKREAKAARVAAVAPTPGGGEIVARESSPSRWTQFMMRLRVEARQVLTSPGLIVLVLF
                     GIGNTAAMLWLGQSTYGTSDYPTLAATISSVRGGFGIIIIMIAVFYGGELVWRERDRK
                     LNEILDSTPVPAWIMTVPKIVAIFAVLLLVNVGAMATGLFYQLVEGAREAGVAEYLAW
                     FIVPAAIDGLLIAVLAVFAQVLSPNKYVGWAIMFVWFVGTIFLSNMGYSNPLYNYGTT
                     PSVPLSDFNGTAGFWKGAAVLQLYWALFALILAVVAHLLWPRGTDLGLRVRARRMRRT
                     FAGAPMVLVAAAAAAMLATGAYAYYNIKVLNRYVTSDDAEKYSADYERKYLKYETLPR
                     PTLTDVKLDVKLFPEQRRLVVDGHYGLKNTTDLPIRDVHVRKLDQDAEFLRLDLAGAK
                     LVSEDEKFGYRIYRFDQPLAPGATTSLTFRSRIWNRGFRASSPATDIVDNGTFVNNFA
                     FAPVIGMNRQNLLSDRTQRRRQGLPPELRPAKLEDLKATARNYIGSDWVNSDITVTTD
                     ADQVPIAPGKRVSDVTRGDRRTARFVSPAPILNFFSIQSSDYQVASRDHNGVKLSVFY
                     HEGHDWNVAKMLRAMAASLDYYRANFGPYQFDYARIIEFPGYASFAQAFAGTMPYSES
                     IGFNAKTNDPEKIDFTTYVIAHEIAHQYWAHQVIGADMQGNTVTSETLAQYSALMVMK
                     KLYGPDQIRRFLKYELDNYLSGRKGEAVEELPLNRVENQAYIHYRKGAVAMYLLQERL
                     GEDAVNRALARFVDKFRFKGAPYLRSTDLIAEFRKEAKTDEQQQLITDLFEKITLYDL
                     KVRDATTRKVGGQWETTLTVAADKFYANGKGDETRAKLDEPIEVGLFAARPGLGAFSS
                     KDVIVISREPIQSGSQRITVRTREKPAFAGIDPYNFYIDRNSDDNVKAVTAD"
     gene            complement(10694..11569)
                     /locus_tag="VHN55_01840"
     CDS             complement(10694..11569)
                     /locus_tag="VHN55_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017669428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2802715.1"
                     /translation="MLEIANLSHTYPNGTVALDDVSLSIPRGMYGLLGPNGAGKSTLM
                     RTVATLQEPTSGSITFGDIDVLAEPEKLRRRLGYLPQDFGVYPRVSAYAMLDQVAVLK
                     GITAKAERKAVVETLLNQTNLWAVRDKNIAGFSGGMRQRFGIAQALIGNPELIIVDEP
                     TAGLDPEERNRFLNLLAAIGDNVVVILSTHIVDDVADLCPRMAVLANGRVQLEGSPAE
                     LIASTRGKVWKKTVPHFEVAEYQETHEVISTRLFAGMTIIHVLSPTQPEGFEPVEGGL
                     EDVYFSTLSTLRRAA"
     gene            11730..12500
                     /locus_tag="VHN55_01845"
     CDS             11730..12500
                     /locus_tag="VHN55_01845"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX2802716.1"
                     /translation="MIAQLSPPAPRSHVLLDGEDLTVELTHYPGGLIQPSHRHSSAQL
                     SFLLAGGFAERSGGRDFAPAGPQHRFQPAGSTHGVRFGANGAVILAFEFRRPQCPGQA
                     THEWHPSASCVGQLAHLLFAGVTPADDTAECLLAIASQPADSGERKRSAVPTWLRSAA
                     DHIADDPLADITAVAASAGVHRVHLSRSFQRHFGLSPVQYRLYCKCSLALRHLVEGGE
                     PAAIAAQSAGFADQSHWTRACRAIAGIGPGRIRRLLAA"
     gene            12573..14075
                     /locus_tag="VHN55_01850"
     CDS             12573..14075
                     /locus_tag="VHN55_01850"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX2802717.1"
                     /translation="MSLLRTIVISAVLAGHSVPSVAAGQDKAFERASAAVRARMAAID
                     ILQGYIPGRAIIAVRAGGPAVVDVKGMTRLTSGRPATEETPFYIASMTKAFVGLMAVR
                     LDANATLPLDTTLAEVFPDMRVAGVDLSKVTMRDALSHRLGFRVPPLNLRTAYTDTVP
                     VASFPAIVSSAAVKIDETFKYDNLGYLLYAAALEARTGRSWRSWIDDLVFDPLGMTHS
                     SARTSDFDGISHLHMRFPDGLHEFAPKSDAIMHAAGGLVISPADMARWLEANVGGKSP
                     IPRRQFAAAQATQVQLDMKEGQLSCTGYSLGWRTCEAMGLTFLEHGGGYTGMRTQMAI
                     LPDHGVGFAALFNSDSMTGGLSGQLMLAFLAGYAGKAEELPPPAALAEKYVAMVADLD
                     ASRAKDFATERADPKWGGWAWRPAPAQLIELAGRYVNPVMGELRIGVEGEALSGRLNG
                     TGLELEPAARDLFAATLASDYELEALRFHRNAAGEVTGLDYLDRRFERKR"
     gene            complement(14072..14941)
                     /gene="panB"
                     /locus_tag="VHN55_01855"
     CDS             complement(14072..14941)
                     /gene="panB"
                     /locus_tag="VHN55_01855"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEX2802718.1"
                     /translation="MSKVTLDTDTSRATPSPVPGKRTTVPSIRGRKVDGKTEQPIVML
                     TAYTMRMAQLLDPHCDMLLVGDSLGQVIYGLPSTIPVTLDMMCAHGAAVVRGSWHALV
                     GVDMPFGSYEASPEDAFDSAALVLKETGCAAVKLEGGEAMAPTIDFLTHRGIPVIGHV
                     GLTPQAVNVLGGYGVRGKEGAEAEKILSDAKAVADAGAFCLVVEGVLEDIATEVAKTV
                     AIPVIGIGASAQCDGQVLVTEDMLGLFERTPRFVKRYDDLAARITTAAETYAGEVRSR
                     SFPSAAETYRPKS"
     gene            15093..15287
                     /locus_tag="VHN55_01860"
     CDS             15093..15287
                     /locus_tag="VHN55_01860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802719.1"
                     /translation="MFDRRLVRDIALAALIAFPAVLPASPTPRSPESRIAAEGSGIVL
                     ADAGIGTLAGNAEATAQGRS"
     gene            complement(15272..15667)
                     /locus_tag="VHN55_01865"
     CDS             complement(15272..15667)
                     /locus_tag="VHN55_01865"
                     /inference="COORDINATES: protein motif:HMM:TIGR02588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02588 family protein"
                     /protein_id="HEX2802720.1"
                     /translation="MANQRSTRIPAVEWVSAAIGVAIVATMFGFLSIEAIRQRNGVPP
                     VMEVVPVGLFATEGRYIVEFEVRNSARKTGASVGVEGALKRAGEEVETSSATLAYVPG
                     QSSRRGGLVFTRDPREYRLQMRVTGYERP"
     gene            complement(15667..>16428)
                     /locus_tag="VHN55_01870"
     CDS             complement(15667..>16428)
                     /locus_tag="VHN55_01870"
                     /inference="COORDINATES: protein motif:HMM:TIGR02587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02587 family membrane protein"
                     /protein_id="HEX2802721.1"
                     /translation="IFSLPMLMTMEMWWLGFYLERPHLLQFVVVNFVILVWLSRVSGF
                     EQTIDWGDDTMDAFAAYAVAATWSAAILWLFGIIEANQPAGEIIGKIAVQTVPASFGA
                     MLASKQLGSREMGDGKGERERKSYWGQLFLMLAGALFLSFSVAPTEEMILISFRMSPM
                     QSMGLILASIFLLHGIVYTVGLKGQEKPPGPTSFWSVFVRFTLVGYAIAAVAATYLLW
                     TFGRIDGAATGEIVGMVAVLAFPGAIGAAIARLVI"
BASE COUNT         2863 a         5329 c         5189 g         3047 t
ORIGIN      
        1 cgcctcgccg agttcgagcg gcacgagtcg atcgatgaga tgaagcacgc cgaccgcttc
       61 tccgagcgga tcctcttcct cgagggactg ccgaacttcc aggcgctcgg acggctacga
      121 atcggcgaga gcgtcgagga gatcttaaaa gccgaccttg aagccgaata tgaagcggtt
      181 gagatgtacc gcaacggcgt cgccgcctgc gagaaggcgc acgattacgt cagtcgcgac
      241 ctcttcgccg aggtgctgaa ggacgaggag ggccacgtcg acgcgatcga gacccagttc
      301 gagatgatca agtcgatggg cctccagaat tacatccagc tgcagtcgga accgatcaag
      361 gagtaattcc ggcacagctt cgaatttcct tggcacggct gtattagttc ggtataacac
      421 ctccgctacc ggagggaatt tccatggcga cactgcccgc cgagacccgc ggcaaccgaa
      481 tcgtgactct cgacgtcgtc cgcggaatcg cggtgatggg aatcttctcc gtcaatgtcg
      541 tcggaatggc gatgttgcag ttcgcctatt tttatccgcc agcctacggc ttcgacggct
      601 tcggcgacca tttgatgtgg ttcctcaact tcgtcctggt cgacggaaaa ctgcgcagcc
      661 tgttctcgat tcttttcggg gcatcgatgc tgttggtcgc cgagcaggcg gtcaaggcgg
      721 cccgctcccc ctggcgcaca cattatgcgc gaatgatcgt cttgctcgtg atcggctggc
      781 ttcactgggc gctgttgtgg tggggcgata tcctcaccca ctacgcggcc gtcggcatgg
      841 ccgcgttcct catgtggaag ctgcgggcga aatggctgat ggtgatcgcg gcggtcttgt
      901 tcgtgatcca cgccgcgcct ccggtctact tcttcaccaa ggaaatcccc gaatattacg
      961 aggtcaagcg cggcgatgcg tcgcccgagg tcaccaagaa gtggaaggag cgaatcgagg
     1021 agttgacccc gagcgctgag cggctggcga aggacagggc cgaacacagg aacatcgcga
     1081 cgcggttcaa tgccgcgatg cccgactttt cgaaaccgat tagcggcgga aaggtgatgg
     1141 aagtgctgca ccccctcgac ctcggtccgc tgtggctcga aacgatcgcg ctgatgctgc
     1201 tgggcatggc cggttacaag tcgggcttcc tgaccggcac gtggcaaaac agcagctacc
     1261 gcagggtcgc agtgttcggt ctcggagtcg gcctcgccgt ttatggcttc ctcggcgcga
     1321 gagcctggct tgccggcttc gcgccggtgg aaatgttcac cgcgacgcag atcgcaacac
     1381 caatattccg acccatcatg gccagcggct acgccgcgtt aatcatcctg ctgttccgca
     1441 acgcatcggc actgcgagcg cgcttcgcgg cagtgggccg gatggcgttc agcaattatc
     1501 tgctctgcac gttcatcggg accttcatct tctacggcat gggcctcgac ctttacggaa
     1561 agctttcgcg cggcgaggcg tggcttctcg tgccgccggt ctgggcgctg atgctgctgt
     1621 ggtcgaagcc ttggctcgac cggttccact acggcccgat ggaatgggcc tggcggagcc
     1681 tcgcccgggg caagctccag ccgatgcgca agcgtccggc cggagagccg cttcccgccg
     1741 ctgcctgacc gatggccacg acttcacccg gccggatcct gactctcgac gtcatccgcg
     1801 gaattgcggt gatgggcatc ttctcggtca acgtcatcga tttcgcgctg atccaggccg
     1861 cctacctgaa ccccgcagcg gcgggcgggg cgagcggcgc cgacctgtac ctttggttca
     1921 tcaatcatgt cgtcatcgac gagaagatgc gaaccttgtt ctcgatcctg ttcggcgcat
     1981 cgtcggcgct cgttttcaac cgcgctctgg ccaaggggga gagcggcgcc cgggtccatt
     2041 attcccgaat ggccgtcctg ttcgtgctcg ggctcatgca tttctacctg atctggttcg
     2101 gcgacatcct ggtttcctat gccttcaccg gaatggccgc ttacttcttc ctccgccgcg
     2161 gaacgaagac gatcctcatc tgggcgggag cgctgttgtt cctcaacgcg gcgatgttca
     2221 gcggcggcag ctggtacatg cacgacgtgc agcagaaggt ggagagccgc accgcgacgt
     2281 ccgaggaact caaatcatgg aagggcatca gcaagctgtc ggtgaccgac ccgaagaagg
     2341 ctgaacagga aaccatcacc cacaggagca agtggccgga gcgtactgcg cggcggttcg
     2401 aaaagcagaa attccagcct ttcgcggggc tgttcgcttt cttcatggaa acgctcgggc
     2461 tgatgcttat cggcgtggcc ggcctgcgca gcggattcct aaccggcgac tggccgcggc
     2521 ggacctacat tcgcattgcg gcgggcggaa tcgcgatcgg cgccatcttc tctgtcgcaa
     2581 gcggcctgac gctgatcgat ctcggcttcc cgccttggtt gattctgggc gcaaactacg
     2641 ggttcggtgc ccccgcccat atcgcaatgg cgcttggcta tgccgcgctg atcgtcctga
     2701 tgatccgccc cggcggctgg ctgaccgccc ggattgcagc ggtcggccgt gctgccttca
     2761 ccaactacct cggtaccagc atcctggcct ctctcatctt ctacggcgac ggcttggcgc
     2821 tgttcggcca cttgtcgcgc gcgcaggcct gggcggttgc ggttccgggt atctggctga
     2881 tcatgctgct gtggtcgaaa ccgtggctcg accgcttcac ctacggaccg ttcgaatggg
     2941 tgtggcgaag cctctctcgg ggcaagcttc agccgatgcg caggtcccgg tccgcgccag
     3001 cggcggcgac cgcctagatc cggccgaagc tttggttgcc ggtcttgcgg ccaaagccgg
     3061 cgggaccggg ccggttgcgc gagacgagcg ggttggtcgc cttttcgaac tgttcaacgg
     3121 tctgctcgaa cgtccggcga agctcgacga cgtccctgac cagctcgtcg gggaaacggc
     3181 ggctctccac gcagaaacgg gcggtcgtct cgatgagctc ggcgatcttg gcgagcggct
     3241 ccgcacccag ttggcgagcc tcgcccttta gcgtgtgtgc cggaatgacc agcccggccg
     3301 cggactgctc gcgcatcgcc tgctcgatgt cggataccga cttgcttccg tcctcgcgga
     3361 aatagctgag gatccggatg aaaccgggac ccagctcggt gcggctgcgc tcgaagtgca
     3421 cccagtcgac gatgtcctgg ccgtcgctca cccaaatctc ctcgacgccc gcggtgtcgg
     3481 gcagtggtcc ctcgccccga atggtagcgc cgaaagggta aaattctcct tagcgcgaac
     3541 ggtcgaacgg atttttcggc gagcgcatgg tcagcctcag cggcaccggc ccgacgccga
     3601 gctcgcgccg gatcgagttg agcaggtagc ggcgataact ctccggcagc tggtccaccc
     3661 gggttccgaa gacgacgaag ctcggcggac gggtgttcac ctgggtgatg aagcgaagct
     3721 tgatccgttt gcccccgggc gcaggcggcg ggttcgcctc gacggccgcc tcgaaccagc
     3781 ggttgagctc gccggtcccg atccgccgcg accattgctc gcgaagctcg aaagcggcgc
     3841 cgagcagctg gtcgatcccc ttgccggtct tcgcagagac ggtgagcacg ggtatgccct
     3901 tgatctgcgc caaaccatct tcgagcgcgc ccttgattcc gttgaacaga gacgaggcag
     3961 attcggccac gtcccatttg ttgattgcga cgatcagcgc ccgcccctcg tcgatcacct
     4021 gctcggcaat cctcaggtcc tgcgcttcca ggccccgagt cgcgtcgaga agcaggatca
     4081 cgacctcggc catgtctatc gcccgccgag catccgcact cgacaatttc tccagcttgt
     4141 cggtgatctt cgcccgcttc ctcaggcccg ccgtgtcgac gaggcggacc ggctttcctt
     4201 gccattccca gtcgaggctg atcgaatccc gggtgatccc cgcctcgggc ccggtaatca
     4261 gccgctcttc gccgagcatc cggttgacca gggtcgactt ccccgcgttc ggccgcccga
     4321 cgattgcaag cttcagcgtt gcgctctcgg tttcgtttgg ctcctcgtcg ggtgcttcct
     4381 ccttctcgac cagcggccga agcgcctcga agaggtcgac gaccccctcg ccatgctcgg
     4441 cgcttagcgg aaccgggtct cccaggccga gccggtaggc gtcgagcact ccggcttcgc
     4501 cggcgcgcga ttccgccttg ttggcgacga ccacgaccgg cgtctcgccg acccgcagcc
     4561 aacgcgcgat ttccgaatcg agcggggtga ctccctcgcg cgagtcgatg aggaacaagg
     4621 caacgtcggc gtcgcgaacc gcggcttcgg tctgctgccg catccgccct ggaagggtgt
     4681 gcgggtcctc gtcctcgtag ccggcggtgt cgatcacccg gaactcgagc ccgagaagcc
     4741 gcgcttcgcc ctcgcgccgg tcgcgggtaa ctccggggcg gtcgtcgact agcgccagct
     4801 tccgaccaac gagacggttg aacagcgtcg acttgcccac gttcgggcgg ccgacaatgg
     4861 cgacggtggg aagcggcatg gcgcctctct aaggccccgc cgccgcgcgt ccagccttag
     4921 cggaaggcgt ggagccgtcc tgagtcgtcg agcacgtaga gcatgttgtt ggcgaccacc
     4981 ggcggcaggc tcacgcttgc gccgacgctc gactggccct ggaccgcgcc cgtctgcggg
     5041 tcggcgaaca tcagtgcgcc ctgggtgctt gcaacgatca gccgtccacc ggcgaggagc
     5101 gggccgacgt atctgatccg ccccgacctg ttcttggcgt tgcgatactc gggaagctgc
     5161 gagatccagc ggatctttcc agtagcgcga gcgatcgcca tcagcttggc atcgtcggta
     5221 acgacgaaca cccagtcacc cgcgacccag ggggttgcga ttccggcgac attgagctcc
     5281 cacatccgct ggccggtaat cagctcgagc gcgaccatcc ggccgccctg cccgatcgcg
     5341 atcacctggc cgttgtcgat gaccgggtcg gcgtcgacgt cggacagcga cgacacgctg
     5401 gttcggatgc tggtccttgc cagcgcatcc tgccagactc cgcggccgtt ttcgtagcga
     5461 tacgcattaa gctcgccgga cgagaatccg gcgacgatcg tgccttgcgc ataggcgggc
     5521 gagccgacgc cgaagattcc cgcgacttca agccccgcgg cctggctcca gttggccgat
     5581 ccgtccgctg tcttgagcga gtagagctgg ttgtcctggc tcatcacgta aaccgcatct
     5641 ccggcaaccg tcggagcgcc gcgcatcggc ccgccgggcc gcacctgcca gacaatcccg
     5701 ccgttggagg catcgagtgc agcaacgaag ccgaggccgt tggtcgcgta gatgcggccg
     5761 ttggcaaagg cgactccgcc tccgaacaac gccgcatcgt tccctttctc ggtcccgaac
     5821 tgtgtcgacc acaccccagt ccccgtccgg gcgtcgaagg cacggacggt ggcggtggta
     5881 tcgatcgtat agacccgccc gttgccgacg atcggtgcag cggcgaggcg ggcggcaaga
     5941 ctggtgccgc ttccgatcga gacctgccac gcccgtgcga tagaggcggg aagcgcgaca
     6001 tgacccatcg atttcgacgc atttccgccc gactggctcc agtcggagtt cacggccggg
     6061 gcaggaagcg tcatcggcag cgaagcggtc gtcgggtcga ccgtcacgtc gatctcggtg
     6121 gtgagaacgg aaatccgctc gccgacaacc ggcgcggtct tggtgctctt cttgataagc
     6181 ccgcatccgc tggcggcgat cgcgccggcg acgaggacga caatcctaag cttgttcatt
     6241 cactgcttcc tgtctggcct ggctgcggga gcgcggccga tgcgtccact cccaatgtgc
     6301 cggcgatctg gacggctcgg ctccggatag agtccggcac ctgcctgtcc gcggcgattg
     6361 ctgcgaaaac gcgtcctgct ttgtctttct gaccctgctt gagataggcc attgcggtca
     6421 attcgcctgc cgtcccgaac catgggtttc ccggctttgc cagcgcctgc agccgcgaca
     6481 ccgtttcctc gggcttgagc tggtcgaatt cgatcgtcgt cgcccgaatg agcgcgagat
     6541 tgcgataggg ttccggaaca tcctcgtccg ccgctaccgc gcggaacttg gcgagcgcag
     6601 tgtcgcggtc gttggcattc atcgctattg ccgcctcgct gagcaaggcc agcgaccgga
     6661 cgagggcgac gtcggaggat tcgaggggct ggagccgctt ctttgcctgc tcgatcttgc
     6721 cgttgccgat gtcggcatag atcgacatca gctcttcgga ctgggcggcc gccttcttct
     6781 cctgccggtc ctgccaatag agatagccgg ccacagccgc gagaaacacc acgaccgcag
     6841 cgatcaccca cttgccgtag gtcttggcaa atccctcgag ctggtcgcga cgcaggtcct
     6901 cgtcgacctc gcggaggaag gcttcgttgg gtgcgtcggg actgtcggga gtgagcgcca
     6961 aagacgtgcc tcaggtcaga agtgcaagca gagtcgaaag ccgcttccct cccccaccgc
     7021 agatgaacgg aagctggcgc cgctccgtct agcggctgtg gcggcaaagg caaagggggc
     7081 tgctagtccg cggtgactgc cttcacattg tcgtcgctgt tgcggtcgat gtagaaattg
     7141 tacgggtcga tcccggcgaa tgccggcttc tcccttgtcc gcaccgtgat ccgctgggag
     7201 ccgctttgga tgggctcccg agaaatcacg atcacgtcct tggaagagaa ggcgccgagc
     7261 cccggccggg cggcgaacag gccgacctcg atcggctcgt cgagcttcgc cctggtttcg
     7321 tcgcccttgc cgttggcgta gaatttatcg gcggcgacgg tcagcgtcgt ctcccactgc
     7381 ccgccgactt tccgggtcgt cgcgtccctc accttgaggt cgtaaagcgt gatcttctcg
     7441 aacaggtcgg tgatcagctg ctgctgctcg tcagtcttcg cttccttgcg gaactcggcg
     7501 atcaggtcgg tcgaccgaag gtacggagcg cccttgaacc tgaacttgtc gacaaagcgc
     7561 gccagcgccc ggttgactgc gtcttctccg agccgttcct ggagcaggta catcgccact
     7621 gcgcccttgc gataatggat gtaggcctgg ttctcgaccc ggtttagcgg aagctcctcg
     7681 accgcctcgc cctttcggcc gctcaggtaa ttgtcgagct catacttgag gaaccgccgg
     7741 atctggtcgg ggccgtagag ctttttcatc accatcagcg ccgaatattg cgccagggtc
     7801 tcgctcgtca ccgtattgcc ctgcatgtcg gcgccgatca cctggtgcgc ccaatattgg
     7861 tgcgcaatct cgtgggcgat cacataggtg gtgaaatcga tcttttcggg atcgttggtt
     7921 ttggcgttga acccgatcga ttccgaataa ggcatcgtcc ctgcgaacgc ctgggcgaag
     7981 ctcgcatagc ccgggaactc gatgatccgg gcatagtcga actgataggg cccgaaattg
     8041 gcccggtaat agtcgagcga ggccgccatc gcccgaagca tctttgcgac gttccagtcg
     8101 tggccctcgt gatagaagac cgacagcttg acgccgttgt ggtctcgaga ggcgacctgg
     8161 taatccgacg actggatcga gaagaagttg aggatcggcg ccgggcttac gaagcgcgca
     8221 gtccggcggt cgcctcgggt cacgtcggag acgcgcttgc ccggcgcgat cggaacctgg
     8281 tcggcatcgg tggtcacggt gatgtcggaa ttgacccagt ccgatccgat gtagttgcgc
     8341 gcagtcgcct tcagatcctc cagcttggcc gggcgaagct cgggcggaag gccctggcgc
     8401 cgccgctgcg tccggtcgct gagcaggttc tggcggttca tcccgatcac cggcgcgaaa
     8461 gcgaaattgt tcacgaacgt gccgttgtcg acgatgtcgg tagcgggcga actcgcccgg
     8521 aagccgcggt tccagatgcg cgagcggaat gtcaggctcg tcgtcgctcc gggagcgagc
     8581 ggctggtcga accggtaaat gcgatagccg aacttctcgt cctcggagac cagctttgcg
     8641 ccagccaaat cgagcctcag gaactctgcg tcctggtcga gcttgcggac gtggacgtcg
     8701 cggatcggca aatccgtcgt gttcttgagg ccgtagtgcc cgtcaacgac cagccgccgc
     8761 tgctcgggga acagcttcac gtcgagcttc acgtcggtga gcgtcggcct cgggagcgtt
     8821 tcgtacttca ggtacttgcg ctcgtaatcg gcggaatatt tctccgcatc gtccgaggtc
     8881 acgtagcggt tgaggacttt gatgttgtaa taagcatagg cgccggtagc gagcatcgcg
     8941 gcggccgctg cggcgacaag caccatcggg gcgccggcga aggtgcgtcg catccgccgg
     9001 gcgcgcacgc gcagcccaag gtcggtcccg cgcggccaca gcaggtgggc aacgacggcc
     9061 agtatcaggg cgaagagagc ccagtagagc tgcagcaccg ccgcgccctt ccagaagccg
     9121 gccgttccgt tgaagtcgct cagcggcacg cttggcgtgg tgccgtagtt atagaggggg
     9181 ttcgaatagc ccatgttcga caggaagatc gtcccgacga accacacgaa catgatcgcc
     9241 cagccgacat atttgttggg gctgagcacc tgcgcgaaga ccgcgagcac cgcgatcagc
     9301 aggccgtcga tcgccgcggg gacgatgaac caggcgagat attcggcaac tccagcttcg
     9361 cgcgcgccct ccaccagctg gtagaagagg cccgtcgcca tcgcccccac attgaccagg
     9421 agcaggacgg cgaagatggc cacgatcttc gggacagtca tgatccaggc tggcaccggc
     9481 gtcgaatcga ggatctcgtt gagcttgcgg tcgcgctcgc gccacaccag ttcgcctccg
     9541 tagaagacgg cgatcatgat gatgatgatc ccgaaaccgc cgcgaacgct cgagatcgtc
     9601 gccgcaagag tcggatagtc gctggttccg taggtggact ggccgagcca cagcatcgcc
     9661 gcggtattgc cgatcccgaa cagaacgagg acgattaggc cggggctggt cagcacctgc
     9721 cgggcctcga cccgaagccg catcatgaac tgggtccacc gcgacgggct ggactcgcgg
     9781 gcgacgattt cgccgccgcc gggggtcgga gcgaccgccg cgacccgcgc cgccttcgct
     9841 tcgcgcttcg cgagcttgcg gagcttgcgc ctggacggcg cccgctcggt catcgagaaa
     9901 cgccatattg tgaacgcgag gaacaggcag ccgagcacga tcgcgtagat tcggttgaac
     9961 agcaaagtcc cgccgagctc gacgagccgg ccgttcatct cgctctgggt ccagtagcgg
    10021 gtagcctcgc gaagcgcgcc attgccgagc ggctcccaga gggcgaacgt gtcgcgatac
    10081 tcgattttct ggccgacgat gctggttgtg acgagatagc ccattaccag cagcacggcg
    10141 ccgatgtacg acgccatcat ggaccgcaac gtggtcgcga gcgcgaacag gagcgcgctc
    10201 gtcaggagga tgttgggaag cgcgaacagc gcatagttcc aagcgtaata agagagcttt
    10261 tgcggtccga ccgtttcagg gtcgacccac ggcatcatcg acccgatcgc cattcccacc
    10321 ggcaccgcaa ggtagccgat ccaggcgacc atcagcccgc cgaggaaccg gccgatgacg
    10381 atctggctct tcgaaaccgg ggtcgcgcga acgatcggcg cgaagccgct gctgtcgtcg
    10441 cgcacgatcg cattggcgac gaaggcggtg acgataaaca ggtaaaaaag cgtcaggatc
    10501 gccgtcgcga tggcgatcgc atagggcgaa ttctcatgga ccgaccccgg cgtgccgatg
    10561 ctgacgttct cgctcgcggt gatcccgaag ccgagcagga agaaaatcgc gattccgacc
    10621 cagaaaaccg ggttgcggag ctggtagcgg acttcgaacc gcatgattcc caggaacatg
    10681 cctctgactc cgctcaggcc gcgcggcgaa gcgtggagag ggtcgagaaa tagacgtcct
    10741 cgagaccgcc ctcgaccggc tcgaagccct cgggctgagt gggggagagc acgtggatga
    10801 tcgtcatccc cgcgaacagg cgggtcgaga tgacctcatg agtttcctga tattccgcaa
    10861 cctcgaaatg cgggaccgtc ttcttccaca ccttgccgcg ggtcgaggcg ataagctccg
    10921 caggactgcc ttccagctgc acccgaccgt tggcgagaac cgccattcgc gggcacaggt
    10981 cggcgacgtc gtcgacgatg tgggtcgaaa ggatcacaac gacattgtcg ccgatcgccg
    11041 ccagcaggtt aaggaagcgg ttgcgctctt ccggatcgag tccggctgtc ggctcgtcga
    11101 cgatgatcag ttcggggttg ccgatcagcg cctgtgcgat cccgaagcgc tgccgcatgc
    11161 cgcctgaaaa gccggcgatg ttcttgtcgc ggaccgccca caaattggtc tggttgagga
    11221 gcgtctcgac gaccgccttg cgctctgcct tggccgtgat gcccttcagc accgcaacct
    11281 ggtcgagcat cgcataggcc gaaacccgcg gatagacgcc gaaatcctgc ggcagatagc
    11341 cgagccgcct gcggagcttc tccggctccg ccagcacgtc gatgtcgccg aaggtgatgc
    11401 ttcccgaggt cggctcctga agcgtcgcga ctgtccgcat cagggtcgac ttgccggcac
    11461 cgttaggccc caggagcccg tacatcccgc gcggaatcga caggctcacg tcgtcgagag
    11521 cgacggtgcc gttcggataa gtgtgcgaaa gattggcgat ttcgagcatg cgtttccccc
    11581 ggattacgag ccgaggctaa gcggcgcacc tagcgataac aacctccgtt tcgacggttg
    11641 gacgaacgac atcgaagggc gcacaacttc acccttcgaa gtaggcggca ccgttgtttt
    11701 ccggtgtgtt attgtgatag cacacataaa tgatcgcgca gctctcgccg ccggcgcctc
    11761 gcagccatgt gttgctcgac ggggaagact tgacggtcga gctcacccac taccccggcg
    11821 gattgatcca gccgtcgcac cgtcattcca gtgcccagct cagcttcctc cttgccggtg
    11881 gcttcgccga acgctccggc ggccgcgatt tcgctcccgc cgggccgcag caccggttcc
    11941 agccggcggg aagtacgcac ggagtccgct tcggcgcaaa cggcgcggtg attctggcat
    12001 tcgaattccg ccgcccgcag tgccccggtc aagcgactca tgaatggcac cccagtgcgt
    12061 cctgcgtcgg ccagctagcg cacttgttgt tcgctggcgt tacgcccgcc gacgatacgg
    12121 ccgaatgcct gctggcgatc gcgtcgcagc cggccgacag cggggagcgg aaacgcagcg
    12181 cagtgccgac ctggctacga agcgcggcag atcatatcgc tgacgatccg ctcgccgaca
    12241 tcaccgcggt cgcggcttcg gcgggagtcc acagagtgca tctctcgcga agtttccagc
    12301 gtcacttcgg tctctcgccc gttcagtacc ggctctactg caaatgctcg ttagcgcttc
    12361 gtcatctggt cgaaggaggc gagcccgcgg cgatcgctgc gcagtcggcc ggatttgccg
    12421 accagagcca ctggaccagg gcctgccgcg cgatcgcggg tatcgggccg ggcaggattc
    12481 gccgtctgct ggccgcttga tgttacctgc gttcaatacc ttagcctgga tatcgcccat
    12541 gtctctgccg aaccagggcg gaggaacggg caatgtcgct attgaggacg atcgtcattt
    12601 cggcggtgct ggctggtcat tcggtgccaa gcgtggccgc agggcaggat aaggcattcg
    12661 agcgcgcgtc ggccgccgtt cgcgctcgga tggcggctat cgacatcctt caaggttaca
    12721 ttcccggccg agccatcatc gccgtccggg cgggcggacc tgccgtcgtc gacgtcaagg
    12781 gcatgacccg cctgacgagc gggcggccgg caaccgaaga aacgccattc tatattgcct
    12841 cgatgacgaa agctttcgtc gggctgatgg ccgttcggct cgatgcgaac gcaactctgc
    12901 cgctcgacac gactctggcc gaagtctttc cggacatgag ggtggcgggg gtcgacctgt
    12961 cgaaggtcac gatgcgcgac gcgttgagcc atcgcctcgg tttccgggtg cctccgctca
    13021 acctgcgcac ggcctacacc gacacggttc cagtcgcctc gtttccggca atcgtcagtt
    13081 cggcagcggt gaagatcgac gagacgttca agtacgacaa tctcggatat ctgctctacg
    13141 ccgcggcgct cgaggctcgc accgggcggt cgtggcggtc gtggatcgac gacctcgtgt
    13201 tcgacccgct ggggatgact cacagctccg cccggacgag cgacttcgac ggcatcagcc
    13261 atcttcacat gcgattccct gacggcctcc acgaatttgc cccgaaaagc gatgcaatca
    13321 tgcatgccgc cggcggcctc gtgatctcac ccgccgatat ggcgcgctgg ctggaggcaa
    13381 atgtcggcgg caaaagcccg ataccgcgga ggcaattcgc cgctgcccag gcgacgcagg
    13441 tccagctgga catgaaggag ggtcagctaa gctgcacggg ctacagcctc ggctggcgga
    13501 cctgcgaggc gatgggcctg accttcctcg aacacggcgg cggctacacc gggatgcgca
    13561 cgcaaatggc gatccttccc gaccacggcg tcggcttcgc tgcgctgttc aactccgaca
    13621 gcatgaccgg cggcctgtcc ggccagttga tgctggcttt tctcgccggc tatgccggaa
    13681 aggccgaaga acttccgccg cccgcggcgt tggccgagaa atatgtcgcg atggtcgccg
    13741 atctagacgc ttcgcgagcg aaggatttcg caaccgagcg agccgacccc aaatggggcg
    13801 gctgggcctg gcgtcccgcg ccagcacaat tgatcgagct tgccggtcgt tatgtgaatc
    13861 ccgtgatggg tgagcttcga atcggcgtcg agggcgaagc gctttctggg cggctgaacg
    13921 gaaccggcct cgaactggag ccggcagcac gcgatctgtt cgcagctacg ttggcgagcg
    13981 actatgagct tgaagcgctt cgttttcacc gcaacgcggc aggcgaggtc accggcctcg
    14041 actatctcga cagacgcttc gaaagaaaac gctagctctt cggccggtag gtctcggcgg
    14101 cggacgggaa gcttcgcgag cgcacttcgc cggcataggt ctcggcggcg gtggtgatgc
    14161 gcgcggcgag gtcgtcgtag cgcttcacga agcgcggtgt gcgctcgaac aggccgagca
    14221 tgtcctcggt gaccagcacc tgcccgtcgc attgcgccga cgctccgatc ccgataaccg
    14281 ggatggcgac cgtcttggcg acctcggtgg cgatgtcctc aagcactccc tcgacgacca
    14341 ggcagaaggc acccgcgtcg gcgactgctt tggcgtcgga caggatcttc tcggcttccg
    14401 cgccttcctt gccgcggacg ccatagccac cgagcacgtt gaccgcctga ggggtcaggc
    14461 cgacatggcc gatcaccggg attccgcggt gggtgaggaa gtcgatcgtc ggcgccatcg
    14521 cttcgccgcc ctccagcttg accgccgcgc agccggtttc cttcagaacg agcgccgcgc
    14581 tgtcgaacgc gtcctcgggt gaggcctcat agcttccgaa cggcatgtcg acaccaacca
    14641 gcgcgtgcca gctgccgcga accactgcag cgccgtgcgc gcacatcatg tccagcgtca
    14701 ccgggatggt agacggaagg ccgtagatca cctgccccag gctgtcgccg acaaggagca
    14761 tgtcgcaatg cgggtcgagc aattgcgcca tccgcatcgt gtaggccgtc agcatcacga
    14821 tcggctgctc ggtctttccg tccaccttgc ggccgcggat cgacgggacc gttgttcgct
    14881 tgccgggcac cggcgaaggg gtcgcccggc tggtgtccgt atcgagtgtg acctttgaca
    14941 tcgccgcgcc ttctaaggtc aggcggcggg acagccaacc ccgctggaat aacggactgg
    15001 cgataacgcg gaacaactat tctcactcga ccgtcgccct cgcaggtgcg gcgcgtagct
    15061 ttggccgtga tatgtgaaat ggagcacatc cgatgttcga tcgccgcctg gtgagggata
    15121 tcgcgcttgc ggccctgatt gccttcccgg ccgtactgcc cgcgtcgccg acccctagaa
    15181 gccccgagag ccgaattgcc gccgaaggat ccggtatcgt ccttgccgac gcgggaatcg
    15241 gcactctggc cggcaatgcc gaagcgaccg ctcagggccg ttcgtagccg gtcactcgca
    15301 tttgcagccg atattcgcgc gggtcgcggg tgaagacgag cccgccccgc cgcgacgact
    15361 gccccggcac gtaagcaaga gtcgccgagc tcgtctcgac ttcctctcct gcccgcttga
    15421 gcgcgccctc aacgcccacg cttgcacccg tcttgcgggc gctgttgcga acttcgaatt
    15481 ccacaatgta cctgccctcg gtggcaaaca gcccgaccgg taccacttcc atcaccggcg
    15541 ggacgccatt gcgctggcgg attgcctcga tggagagaaa tccgaacatc gtcgcgacga
    15601 tcgcgacacc gattgcagca gaaacccact cgactgccgg gattcgcgtg gacctttggt
    15661 ttgccatcag atcaccagcc tcgcgatcgc ggcgccgatc gctccgggga aggcaaggac
    15721 cgccaccatg cctacgatct cgccggtcgc agcgccgtca attcgcccga acgtccacag
    15781 gaggtatgtc gccgcgactg cggcaatcgc ataaccgacc agcgtgaacc gaacgaacac
    15841 gctccagaag ctcgtcggcc ccggcggctt ttcctgccct ttgagcccga ccgtgtagac
    15901 gattccatgg agtaagaaga tcgaggcgag tatcagtccc atgctctgca tcgggctcat
    15961 cctgaacgag atcaggatca tctcctccgt cggggcgacg ctgaacgaga ggaacagcgc
    16021 gccggcaagc atcaggaaca gctgccccca atagctcttg cgctcgcgct cgcccttgcc
    16081 gtcccccatc tcgcggctgc ccagctgctt gctcgcaagc attgccccga agcttgccgg
    16141 cacggtctgg acggcgatct tgccgatgat ctcccccgcg ggctgattcg cctcgataat
    16201 tccgaacagc cacaggatcg ccgccgacca ggtcgccgcg accgcataag cggcgaacgc
    16261 atccatcgtg tcgtcgcccc agtcgatcgt ctgctcgaaa cccgacacgc gcgacagcca
    16321 gacgagtatt acgaaattga cgacgacgaa ctggagcagg tgcggccgct cgagatagaa
    16381 gccgagccac cacatctcca tcgtcatcag catcggcagg ctgaaaat
//
LOCUS       DATAKH010000051        13474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36142,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000051 DATAKH010000000
VERSION     DATAKH010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 13474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13474
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36142"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1380)
                     /locus_tag="VHN55_01875"
     CDS             complement(<1..1380)
                     /locus_tag="VHN55_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007684730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HEX2802722.1"
                     /translation="MLTHISVRGAREHNLKGIDVEIPRESLTVITGLSGSGKSSLAFD
                     TIYAEGQRRYVESLSAYARQFLEMMQKPDVEHIDGLSPAISIEQKTTSKNPRSTVATV
                     TEIYDYMRLLWARVGVPYSPATGLPIEAQQVSQMVDRTMQLPEGSRHYLLSPVVRGRK
                     GEYRKELAEWQKAGFTRVRIDGVFYDIEDAPALDKKYKHDIELVVDRIVIREGIEARL
                     ADSFETALKLAEGLAYLDPADPPAESESKGGMKLDFGVPGRILFSQKFACPVSGFTIA
                     EIEPRLFSFNAPQGACPACDGLGEKLVFDEDLVVPNHALTIAKGAVAPWAKSQPPSPY
                     YMQVLGSLARAYDFELNVPWRDLPEEAQRVILYGTEGRPVVLRFMDGRKSYEVKKPFE
                     GVLANLQRRFNQTESAWMREELSRYQGSRPCEVCEGARLKPEALSVKIAGEHISGASQ
                     RSVADARDWF"
     gene            1568..2374
                     /locus_tag="VHN55_01880"
     CDS             1568..2374
                     /locus_tag="VHN55_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802723.1"
                     /translation="MATLSLTAGLRDEYDRLFTSCAVRPQYQAQIDAAVAKMIANKGR
                     YQAVSRTTNVPWTVIAVLHELECGQRFDRHLHNGDPLGACTIHVPKGRPRGTGPWTWE
                     ESAKDALGIDRLPQWSDWSVAGTLYKLECYNGAGYRLYHPSVLTPYLWSYSDHYSSGK
                     YKADGVFSNSVVSKQPGTAVLLRRLAEKGESAFSDQATPSPASGPLVVSYMKSKPINE
                     VKIGHAERLQRWLTTYPGVFVKDDGWAGEKTSNAYKLVTGHHLPGDPRGD"
     gene            complement(2391..5120)
                     /locus_tag="VHN55_01885"
     CDS             complement(2391..5120)
                     /locus_tag="VHN55_01885"
                     /inference="COORDINATES: protein motif:HMM:NF021508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HEX2802724.1"
                     /translation="MAMGSSAKSIVLFSDGTGNSSAKLFKTNVWRMYEAVDLGPSPAG
                     DRNQISFYDDGVGTSGFKALAALGGAFGWGLKRNVLELYRYACRNYRDGDSIYAFGFS
                     RGAFTIRLVVEFIASQGLVKSDDESDLDHKSRRAYRVFRSQFTPRKLQWPTIALRRLR
                     DKWADRRDRRKGITPYNREENRHPRIRFVGVWDTVAAYGGPISEITRAIDNWIYSLSM
                     PDYELNERVECARHALSIDDQRDAFLPLLWDEHAEARRAAEAKRAKEAARSAAEAAGK
                     GGREKERERLLAEARNQARIEKRYRTRLEQVWFTGMHADVGGGYPDESLSYVSLLWMM
                     EEAENAGLRTLAAIKDRYFALANCYGPMHDSRAGIAAYYRYQPRKIASWVHPPDPRYL
                     QLRYPDVRHAGKEHGLLCNVRVHESVIARINSGTVRYAPISLPAKFDVIPPQLKGEAI
                     EQATSANAAKSNITQTAESKPLVSSTVRRRIDRGNSERADCHENLWDFVWGRRAVYFA
                     TIAVTLLLVVLPFWNPISFVDRACSDSRCVMPSLIRSMDKVAPGFTTPWIRGFAQFPF
                     SAILLIIAIFVLLRWGRSIERRLSDKSYHLWRGLLEGQAASDEQCRKTPLRRFRESKG
                     NQGTIWALKWYVLPAAFGLLMLSVILYIPLVALAQASIQYEEASHYFCAPEKPSALTP
                     LTKTELTFDTSKLCQATAKVVEKGTMYDVVFQLPLDPNGEPLPWWDADVASAPDALTR
                     VRAKSFGQVLGMPMRRVIEASYLQPLAQITTVGAQAEAKRGWLPDWLRSRLPHLSRVY
                     VSRLELERDPVWPELYRARFRAERDGSLHLFANDAQLPFGYGRGLYANNCGVAQVTIT
                     KILPPPRGQPRSRTSWRARRQLLAREPGAPVEIPECARPRLKALATGALRTQH"
     gene            5332..7371
                     /locus_tag="VHN55_01890"
     CDS             5332..7371
                     /locus_tag="VHN55_01890"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HEX2802725.1"
                     /translation="MLVSKSRLCALLLACSALAAIPAAAQTSAPAATAPETVRFGTWG
                     VDLDTRDLSVKPGDDFQRYALGKWLDATEIPADQGSAGVGYDTYNRNQERLRSIIMSA
                     PKDSQLGALYGSWMDEARLEQLDSKPLQADLDRVAAIRTKAEFTRHMAATLSDFGSTL
                     FALGVVPDLNNPTVNTLFVGTSGLGLPDRDYYLLDKFKKEREAYRAYIGRTLAMVGTP
                     DSAAAADSILAFETEIAKLSWDKTDRRDIKKLNNPMTEAELKAYAPGIDWTSYLQAAN
                     VAGIVPQIIVSDNTAVKALAALYEKTPLETLKAWERFNTVDQAANYLSKRFVDSKFEY
                     SKTLSGVKELRPRWRRGIDQVDARLGELLGQTYVERFFPASSKAMMEELVANLKKAAA
                     VRIKGNGWMGPPTKAAALEKLDKMQVMVGYPEKFRDYSKLELKADDLYGNIKRSIAFD
                     HAYDLADLGKPVDKKKWGMSPATVNAYNAGLENKIVFPAGILQAPYFDPKADPAVNYG
                     AIGAVIGHEIMHGFDDKGRKIDATGAVRDWWTKEDAARYTALTDALGKQYSAYEAAPG
                     VFINGEFTMGENIGDMSGLEVAYDAYKMSLGGRQAPVVDGLTGDQRFFLAFAQAWRSK
                     QRDDSIKTQVASDPHSPARYRIIGPLRNLDAWYAAFGIGADSKFYIAPDQRVRIW"
     gene            7530..8006
                     /locus_tag="VHN55_01895"
     CDS             7530..8006
                     /locus_tag="VHN55_01895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802726.1"
                     /translation="MARKWWLALLALLIVTPALAQVMVPVQKIEPVRTAPVVKVPEVA
                     AEENNDLTKKTMTIEEARARISQLTKEKRAANQKLKEALARIDEMTKPGGSLVRAYCS
                     DKYTSRNTAGAEQKCERYTCNQVSGLCNQTATSSSMCAPGFNFEAGKCVTLEEAGR"
     gene            complement(7981..8532)
                     /gene="thpR"
                     /locus_tag="VHN55_01900"
     CDS             complement(7981..8532)
                     /gene="thpR"
                     /locus_tag="VHN55_01900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007714414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEX2802727.1"
                     /translation="MHRLFVAIRPPEPIRDLLIDAMDEGPELRWVGDDNLHLTLRFIG
                     EVERPMADDIAGSLASVRSPEFELRLNGVGRFDRRGGGAVWAGVEPRAPVVELAARIE
                     RSLVRTGLKPERRAFHPHITLARYRRGDGDAARGFERKRADLSSPPFAVDRFMLFESH
                     LSRHGAHYVEVASYALSAPPPRE"
     gene            8612..11062
                     /locus_tag="VHN55_01905"
     CDS             8612..11062
                     /locus_tag="VHN55_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011415786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEX2802728.1"
                     /translation="MISKRCSIVAALIRTSALAGLTMAAGGAMAQSVPILQPGAPGQA
                     PRVLTPEQAVQIANTSFSADDVRFMQAMILHHQQAVDMAALVKDRTNRKALVDAARRI
                     DASQDDEIAFMRKWLTERGQAVQLPGGEHAMHALPAMAAMSSGIGMAGMATPAQMAEL
                     AAAKGPAFDRLFLQLMIAHHQGAITMAEDLLKRSGSAYDPILYEFVNSVINEQKAEIR
                     RMNELLVGLVDDPRSSLKAGFRDAGQAISNLKLVASLPKPTGFFDPANPAGLPLSLLN
                     EKKKGADKDDDKDSDDRSPLLSFANTDMAFSGDLLAAGNYHGFNLYRLGAGGAPQLVS
                     SVICPGGQGDLSIVGNILIMSVEQTRGRVDCGRQGVQADVSQERFRGIRIFDISDVTR
                     PVQVGQVQTCRGSHTHSVVSGPGEDGNIIVYVSGTAGVRKGEELPGCVGEVADIRTSL
                     FRIDVVEIPVANPAAARIVDSPAVFADPATGNLAGLWRGGGHGEGTQETSRTDQCHDI
                     TVFPARSLAAGACSGNGIIFDISNPRQPVRIDAVNDPGFSYWHSATFNNDGTKVIFTD
                     EWGGGGRPRCRVQDPRNWGADAFYDIVGGKLQYRSHYKLPAVQSEQENCVAHNGSIIP
                     VPGRDIFVQAWYQGGLSVIDFTDSANPVEIAYFDRGPVNAKEMVMGGYWSSYWYKGRI
                     YGTEIARGLDVFALEPSASMTENEIAAASLADYGGRFNPQQQFPVRWPAHPIVALAYL
                     DQLERSRAVAPAATAELRQALGEARSVIDGRTKNGGLAARIEALAGGLGVATADAASA
                     KRLAGLRETASGIAAQLR"
     gene            complement(11114..12790)
                     /locus_tag="VHN55_01910"
     CDS             complement(11114..12790)
                     /locus_tag="VHN55_01910"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX2802729.1"
                     /translation="MTMTNHFLTALAAAVVSLAVVPASALAQTSEVVMADVARQADVL
                     LKSSYPADGPGSALIVARGGEVIYAGAQGLADIETRRPITADTPFLLGSITKQFTAAV
                     VLQLVAEGKMSLDDPLSRFFPDWPAPTSGATVRQFLNHTSGLQDFSKVPGWIAANRDK
                     DWTTEQLLDLFRKLPAKSEPGTQWEYNNGGYVMLGAIVEKMTGKPWHEVIAERIARPL
                     GLTTLDYADADQMPKLPVGYSDEDGRPVAVRRPQMSIAHAAGGIAASVTDIAKWADAL
                     HNGRVVRPDLYREMTSPARLADGSTEPYGFGLRLQKVRGRQALVHGGSGAGLDTDSIY
                     IPAEKLFVAVFANSDDPATDPSLLTRRLSALALGQPIPTFTPAKVEMPAVEPLFGAYA
                     PDSGPPFLFSAEDGKLYMSRGGSRMEAFAAGGDRFFFGPDRLLWVSFVRKPDGAHVME
                     LHEPDSVEPETAVRTGPVPPQLALPEAVLESYAGIYKTETVTVTVAVSEDGKLTVTPP
                     DGEAMVLRPTSQTEFRIDGTPMRVVFHPENGVVNRFTMYRGARELHGVRQ"
     gene            13009..>13474
                     /locus_tag="VHN55_01915"
     CDS             13009..>13474
                     /locus_tag="VHN55_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX2802730.1"
                     /translation="MQNQFDPRTTSATSEGVNAATVGVPRAARDAGLRSYMLSVYNYM
                     ASGVLLTGIVALLFANSGLAAQVLTTPLRWLIILAPLGFVMAMSFGLNRMSTGTLQAL
                     FWAFAVAMGLSMSSIFLVFTGTSIAQTFFAVAVGFLGLSLYGYTTKKDLSGFG"
BASE COUNT         2390 a         4277 c         4462 g         2345 t
ORIGIN      
        1 gaaccagtcg cgggcgtcgg caacgctgcg ctgcgacgcg cccgagatat gctcgccggc
       61 gatcttcacc gatagcgctt cgggcttgag gcgggcgcct tcgcacacct cgcacggtcg
      121 gctgccctgg tagcgcgata gctcctcgcg catccacgcg ctctcggtct ggttgaagcg
      181 gcgctggagg ttggcgagga cgccctcgaa cggcttcttg acctcgtagc tcttgcggcc
      241 gtccatgaag cgaaggacga cggggcggcc ttcggtgccg tagaggatca cgcgctgggc
      301 ttcctccggg agatcgcgcc aagggacgtt gagctcgaaa tcgtaggcgc gggcgaggct
      361 gcccagcacc tgcatgtagt aaggcgaggg cggctgcgac ttcgcccagg gggcgaccgc
      421 gcccttggcg atggtgagcg cgtgattggg aacgacaagg tcctcgtcga acaccagctt
      481 ctcgcccagg ccgtcgcaag ccgggcaggc gccctgcggc gcgttgaacg agaacaggcg
      541 cggctcgatc tcggcgatgg tgaaaccgga caccgggcag gcgaacttct ggctgaaaag
      601 gattcggccg gggactccga agtcgagctt catcccgccc ttggactcgc tttcggcggg
      661 cgggtcggcg gggtcgagat aggcgaggcc ttcggcgagc ttgagcgccg tctcgaagct
      721 gtcggcaagg cgcgcctcga ttccttcgcg gatgacgatc cggtcgacga ccagctcgat
      781 gtcgtgcttg tatttcttgt cgagcgcggg cgcgtcctcg atgtcgtaga atacgccgtc
      841 aatgcgcacg cgcgtgaagc ccgccttctg ccactcggcg agctccttgc ggtactctcc
      901 cttgcggccg cgcacgacgg ggctgagcag gtaatgccgc gagccctccg ggagctgcat
      961 cgtccggtcg accatctggc tgacctgctg cgcctcgatc gggaggccgg tcgcaggcga
     1021 gtagggcacg ccgacccgcg cccacaggag gcgcatgtaa tcgtagatct ctgtgacggt
     1081 ggcgactgtc gatcgcgggt tcttgctcgt cgtcttctgc tcgatcgaga tcgccggcga
     1141 caggccgtcg atatgctcga cgtccggctt ctgcatcatc tccaggaact ggcgcgcgta
     1201 ggcgcttaag gactccacgt agcggcgctg gccttccgca tagatggtgt cgaaggcgag
     1261 gctggacttc cccgatcccg acagtccggt gatgaccgtc aggctctcgc gcggaatctc
     1321 aacgtcgatc cccttcaaat tgtgctcgcg agcgccgcgg acggaaatat gggtcagcat
     1381 tggggtcttc gttccggtta tgttctgaag ttacgcgcgc acctttcccc ggtcaacgcg
     1441 gcattgccgg atatgggggc tgctgccgcg gatttcgagc gtgacgcacc ctatcgaagg
     1501 ttggcttgac gccttttccc ggctgtgagt tcctttgggc gccgaatctt tctcgaaagg
     1561 gaacgacatg gcaacgctat ctctcaccgc aggactccgc gacgaatatg accgcctgtt
     1621 cacgagctgc gcggtgcgcc cgcagtacca ggcgcaaatc gatgcggcgg tcgccaagat
     1681 gatagccaac aaggggcgct atcaggcggt ttccaggacg accaacgtgc cgtggacggt
     1741 gatcgccgtc ctccacgagc tcgaatgcgg acagcgtttt gaccgccacc tgcacaacgg
     1801 cgatccgctt ggtgcgtgca cgattcatgt gcccaagggc cgcccgcgtg ggacggggcc
     1861 gtggacctgg gaagaaagcg ccaaagatgc gcttggaatc gatcggctgc cgcaatggag
     1921 cgactggtcg gtggcgggga cattgtacaa gctcgaatgc tataatggcg ccggctacag
     1981 gctttaccat ccgtcggtgc tgacgcccta cctgtggtcc tattcggacc actacagctc
     2041 gggaaagtac aaggccgacg gggtcttttc gaattcagtc gtgtccaagc agccgggcac
     2101 cgccgttctt cttcgccggc ttgcagaaaa aggggagtcc gcgttcagcg accaggcgac
     2161 tccttcaccc gcctccggcc ccctcgttgt ctcctacatg aagtcgaaac ccataaatga
     2221 ggtgaagatc ggccacgcgg aacggttgca gcgatggctg acgacttatc ccggtgtttt
     2281 cgtgaaggac gacggctggg cgggcgagaa aacgtccaac gcgtacaagc tggtcaccgg
     2341 ccatcacctg cccggtgacc cgcgcggcga ttgaggcgcg ccggttgcgt ctagtgctgc
     2401 gtgcgcaagg cgccggtggc caacgccttc agcctgggcc tggcgcactc gggaatttcg
     2461 acgggcgcgc ctggctccct ggccagcaac tggcgccgtg cgcgccacga tgtccgtgag
     2521 cgaggctggc ctcgcggcgg cggcaggatc ttggtgatcg tgacctgcgc aacgccgcag
     2581 ttatttgcat agaggccgcg gccatatccg aacggcaatt gcgcatcgtt ggcgaacaaa
     2641 tgaaggctgc cgtcgcgctc ggcccggaag cgggccctgt agagctcggg ccagaccggg
     2701 tcccgttcca gttccagtcg cgagacgtag accctgctca aatgggggag gcgcgagcgg
     2761 agccagtcgg gcagccagcc gcgcttcgct tctgcttgcg ccccgaccgt agtgatttga
     2821 gcgagcggct gcaggtagct ggcttcgatg actcggcgca tcggcattcc gaggacctgg
     2881 ccaaagcttt tcgcccgcac tcgggtcagc gcgtcgggag cggacgcgac atcggcgtcc
     2941 caccacggca gcggttcgcc gttggggtcg agcggaagct ggaacacgac atcgtacatc
     3001 gtgcccttct cgacgacctt tgcggtcgcc tggcaaagtt tcgaggtgtc gaacgtcagt
     3061 tcggtcttcg tcagcggagt gagcgccgac ggcttttcgg gcgcgcaaaa gtaatggctg
     3121 gcctcctcat actggattga ggcctgggcc agcgcgacga gcgggatgta gagaatgacc
     3181 gacagcatga gtagcccgaa ggcggcgggc aggacgtacc acttcagcgc ccagatcgtc
     3241 ccctgattgc ccttgctctc gcgaaatctg cgaagcggcg ttttcctgca ctgttcgtcg
     3301 ctggcggctt gcccttccag cagcccgcgc cacaggtgat aggatttgtc gctcagccgg
     3361 cgctcgatcg atctgcccca tctgagcagg acgaagatcg cgattatcag aaggatcgcg
     3421 ctgaatggga attgtgcgaa gccacgaatc catggcgtcg tgaagccggg ggcgaccttg
     3481 tccatcgacc tgatcaggct gggcatcacg cagcgggagt cggagcaggc cctgtcgacg
     3541 aaactgatgg gattccagaa cggcaggacg accaggagca aagttactgc gatcgtcgcg
     3601 aaataaacgg cacggcggcc ccaaacgaag tcccatagat tttcgtgaca gtcggcgcgt
     3661 tcgctattcc cccgatcgat gcgacggcga acggtcgatg aaacgagcgg cttcgactcc
     3721 gcggtctggg taatattgga cttggccgca ttggcgcttg tcgcctgctc gatcgcttca
     3781 cccttgagct gcggcggaat gacgtcgaac ttggcgggaa gcgaaatggg cgcgtagcgc
     3841 acggtcccgc tattgatcct ggcaattacg ctttcgtgca cccggacgtt gcacagcagg
     3901 ccatgctcct ttccggcgtg gcggacgtcc ggatagcgaa gctgcaaata gcgcgggtcg
     3961 ggcggatgga cccaagacgc gatcttacgc ggctggtagc ggtaataagc ggcaatgccg
     4021 gcgcggctgt cgtgcatcgg cccgtagcaa ttggcgagtg cgaagtagcg gtccttgatc
     4081 gcggcgagag tgcgcagccc ggcattctcc gcttcctcca tcatccacag caaagaaaca
     4141 tagctcaggc tttcgtccgg atagccccca ccgacatcgg cgtgcatgcc ggtgaaccac
     4201 acctgctcga gccgggttcg atagcgcttc tcgatcctgg cctggttccg ggcttcggcg
     4261 agcagccgct cgcgctcctt ttcccggccg cctttcccgg cggcttccgc agcggaacgc
     4321 gcagcctctt tcgccctttt cgcttcggcg gcccggcggg cctcggcatg ctcgtcccaa
     4381 agcagcggaa ggaacgcgtc acgctggtcg tctatcgaga gtgcgtggcg cgcgcactct
     4441 acccgctcgt tgagctcgta atcgggcatg ctgagggaat agatccaatt gtcgatcgcc
     4501 cgagtgattt cagaaatcgg tcccccatag gcagcgacgg tgtcccaaac tccgacgaac
     4561 cggatcctgg gatggcggtt ctcctcgcgg ttgtagggcg taatgccctt gcgcctgtcg
     4621 cggcggtcgg cccatttgtc gcgcagccgc cttagggcaa tggtcggcca ctgcagcttg
     4681 cgtggcgtga actgcgagcg aaacacgcga taggcgcggc ggcttttgtg atcgaggtcg
     4741 ctctcgtcgt ccgacttgac caggccctgc gaggcaatga attcgaccac aagccggatg
     4801 gtgaaggcgc ctcggctgaa gccgaacgcg taaatgctgt cgccatcgcg atagttgcgg
     4861 caggcatagc ggtagagctc caggacattg cgcttgagcc cccagccgaa agcacctcca
     4921 agcgccgcca gggctttaaa accggaggtc ccgacgccgt catcgtaaaa ggaaatctgg
     4981 ttgcgatcgc cggccgggct cggcccaagg tcgaccgcct cgtacattcg ccaaacattg
     5041 gttttgaaga gttttgcgct gctgtttccc gttccgtcgg aaaacaggac gatcgacttg
     5101 gcagaagacc ccatagccat gccccccgga gagcgatcgc tcccccagac tcggccgcga
     5161 ggaatggacg accaatcgcg gcaaccgtca agattacttt agttggtggt ggccggcgtt
     5221 cgggccggtc cacccgttcg cagacttgga agtgccgctc gttgaacggg actcgctcgc
     5281 tttttgtggc gggcgtagcc gttcgaattc aaccatttcc cgggggattc gatgcttgtt
     5341 tccaagtcgc gcctttgcgc tttgcttctc gcctgcagcg cgcttgctgc aattccggcc
     5401 gccgcccaga ccagtgcacc tgcggcgacc gcgcccgaaa ccgtgcgttt cggcacatgg
     5461 ggggtcgatc tcgacacccg cgacctgtcg gtgaagccgg gggacgattt ccagcgctac
     5521 gcgctcggca agtggctcga cgcgacggaa atccccgccg accagggctc ggcaggcgtc
     5581 ggctacgaca cttacaaccg caaccaggag cggctgcgaa gcatcatcat gagcgctccg
     5641 aaggacagcc agctcggcgc gctttacggc agctggatgg acgaggctcg gcttgagcag
     5701 ctcgattcca agccgctcca ggcggatctc gaccgggtcg cggcgatccg caccaaggcc
     5761 gagttcacgc ggcacatggc ggcgaccctc tccgatttcg gctcgaccct gttcgcattg
     5821 ggcgtggtcc ccgatctcaa caatccgacc gtgaatacct tgttcgtcgg gaccagcggg
     5881 ctcggccttc ccgaccgcga ctattacctg ctcgacaagt tcaagaagga gcgagaggcc
     5941 tatcgcgcct acatcgggcg gaccctggca atggtcggga ctcccgattc cgccgcagca
     6001 gcggattcga tcctcgcctt cgagaccgaa atcgcgaagc tgtcgtggga caagaccgac
     6061 cgccgcgaca tcaagaagct caacaacccg atgaccgagg ctgagctgaa ggcctatgcg
     6121 cccgggatcg actggacgtc ctacctccag gcagcaaacg tggcgggaat cgtcccgcag
     6181 atcatcgtca gcgacaacac ggcggtgaag gcgcttgcgg cgctgtacga gaagaccccg
     6241 ctcgaaaccc tgaaggcgtg ggaacggttc aacaccgtcg accaggcggc gaactatctg
     6301 tccaagcggt tcgtcgacag caagttcgag tacagcaaga cgctgagcgg cgttaaggag
     6361 cttcggcccc gttggcggcg cggaatcgac caggtcgacg cgcgcctcgg cgagcttctc
     6421 ggccagacct atgtcgaacg ctttttcccg gcatcgtcga aggcgatgat ggaagagctg
     6481 gtcgccaacc tgaagaaggc ggccgcggtg cggatcaagg ggaacggctg gatgggcccg
     6541 ccgaccaagg cggccgctct cgaaaagctc gacaagatgc aggtgatggt cggctatccg
     6601 gagaaattcc gcgactattc gaagctcgag ctcaaggcgg acgacctcta cggcaacatc
     6661 aagcgaagca tcgccttcga ccacgcctac gacctcgccg acctcgggaa gccggtcgac
     6721 aagaagaaat gggggatgag cccggctacg gtgaatgcgt acaatgccgg tctggagaac
     6781 aagatcgtct tcccggctgg aatcctgcag gcgccctatt tcgaccccaa ggcggacccc
     6841 gcggtaaatt acggcgcgat cggcgctgtc atcggccacg agatcatgca cggcttcgac
     6901 gacaagggcc gcaagatcga tgcgaccggc gccgtgcgcg actggtggac caaggaagac
     6961 gccgcccgct acaccgccct gaccgatgcg ctcggcaagc aatattcggc ctatgaagcg
     7021 gctccgggag tcttcatcaa cggcgagttc acgatgggcg agaacatcgg cgacatgtcg
     7081 gggttggagg tcgcctacga cgcttacaag atgtcactgg gcggcaggca agcgccggtg
     7141 gtcgacggcc tgaccggcga ccagcgcttt ttcctcgcct tcgcccaggc ctggcgaagc
     7201 aagcagcggg acgattcgat caagacccag gtcgcgtccg acccgcacag cccggcgcgc
     7261 tacaggatca tcgggccctt gcggaatctc gacgcctggt acgcagcgtt cggcatcggg
     7321 gcggactcga aattctacat cgcgcccgat cagcgcgtcc gaatctggtg agccttgccg
     7381 gcccgtccgg caggtgaagg gaatgcgcgg cccggcatcg tcggccgcgc attttcttta
     7441 aaccggcatt gaatgagagg gactcaaaaa aggaatcgcc gcggttgcgg ccggagcata
     7501 cattcaccgc tccaacaggg gagcgaatca tggcgcgtaa atggtggctg gctttgctgg
     7561 cgttgcttat cgttactcct gcgctcgcgc aggtcatggt cccggtccag aaaatcgaac
     7621 cggtccgaac ggctccggtc gtcaaggtgc ccgaggtggc cgccgaagaa aataatgacc
     7681 tgaccaagaa gacgatgacg atcgaggagg ctcgggcgag aatttcgcag ctcaccaagg
     7741 aaaagcgcgc cgccaaccag aagctcaagg aagcgctggc caggatcgac gagatgacca
     7801 agcccggcgg ctcgctcgtg cgcgcttatt gctcggacaa gtacacgtcg cgaaacacgg
     7861 ccggtgccga gcagaagtgc gagcgctaca cctgcaacca ggtgtcgggc ctgtgcaacc
     7921 agaccgccac cagcagctcg atgtgcgccc ccggattcaa tttcgaagcc ggaaagtgcg
     7981 tcactctcga ggaggcgggg cgctgagggc gtagctcgcc acttccacat agtgggcgcc
     8041 gtgccgggag aggtgacttt cgaacagcat gaagcggtcg accgcgaacg gcggtgacga
     8101 caggtcggcg cgcttgcgct cgaagccgcg ggcggcgtcg ccgtcgccgc gcctgtagcg
     8161 ggcgagggta atgtgcgggt gaaaggcgcg ccgctcgggc ttcaggccgg tgcggacgag
     8221 cgagcgctcg atccgcgcgg caagctcgac gactggcgcg cgcggctcga ccccggccca
     8281 gaccgcgccg ccgccgcggc ggtcgaagcg gccgacgccg ttcagccgaa gctcgaactc
     8341 aggcgagcgg acgcttgcca gcgagccggc gatgtcgtcc gccatcggcc gctcgacctc
     8401 gccgatgaaa cgcagggtca ggtggaggtt gtcgtcgccg acccagcgta gctccgggcc
     8461 ttcgtccatc gcgtcgatga ggaggtcgcg aatgggctca ggcgggcgga ttgcgacgaa
     8521 tagccggtgc attccagcga taataaaccg cggctcccca tggggtacat gctgtgatag
     8581 gcctccccgc ctcattgggg agaatggcat aatgatttcg aaacggtgct cgattgtcgc
     8641 ggccttgatt cgcacgtccg cactggccgg cctgacgatg gccgctggcg gcgcgatggc
     8701 acaaagcgtg ccgatcctgc agccgggcgc gccggggcag gctccacggg tcctgacccc
     8761 cgagcaggcg gttcagattg ccaacaccag cttttccgcc gacgacgttc gattcatgca
     8821 ggccatgatc ctgcaccacc agcaggccgt cgacatggcg gcgctggtca aggaccgaac
     8881 caaccgcaag gcgctggtcg acgctgcccg ccggatcgac gcttcgcagg acgatgagat
     8941 cgccttcatg cgcaagtggc tgaccgagcg cggtcaggca gtgcaactgc ccggcggcga
     9001 gcatgcgatg cacgcgcttc cggcgatggc ggcgatgtcc agcggaatcg ggatggcggg
     9061 aatggcgacg ccagcgcaaa tggcggagct cgccgccgcg aaggggcccg cgttcgaccg
     9121 gctgttcctg cagctgatga tcgcccacca ccagggcgcg atcacgatgg cggaggattt
     9181 gctcaagcgc tccggctccg cctacgaccc gatcctctac gagttcgtca actcggtcat
     9241 caacgagcag aaggccgaga tccggcggat gaacgagctc cttgtcgggc ttgtcgacga
     9301 cccgcgctct agcctcaagg ccgggttccg cgatgccggc caggcaatca gcaacctcaa
     9361 gctggtggcg tcgctgccga agccgaccgg cttcttcgac cccgccaacc cggcggggct
     9421 tccgctcagc ctgctgaacg agaagaagaa gggcgcggac aaggacgacg acaaggattc
     9481 cgacgaccgc tcgccgctgc tcagcttcgc caataccgac atggcctttt cgggcgacct
     9541 gctcgcggcc ggcaattatc acggcttcaa cctctaccgg ctcggcgccg gcggggctcc
     9601 gcagctggtc agctcggtca tctgcccggg cgggcagggc gacctgtcga tcgtcggcaa
     9661 catcctgatc atgtcggtcg agcagacccg cggccgggtc gattgcggcc gccagggcgt
     9721 ccaggccgat gtcagccagg agcgtttccg tggcatccgg attttcgaca tcagcgacgt
     9781 gacgcgcccg gtccaggtcg gccaggtgca gacctgccgc gggtcgcaca cccattcggt
     9841 ggtgtcgggc cccggcgagg acgggaacat catcgtctac gtttcgggga cggccggcgt
     9901 ccgcaagggc gaggagctgc ccggttgtgt cggcgaagtc gccgacatcc gcacgtcgct
     9961 gttccggatc gatgtcgtcg aaatccctgt cgccaacccg gctgcggcgc ggatcgtcga
    10021 cagcccagcg gtgttcgcgg atccggcgac cggcaatctc gccggcctgt ggcgcggcgg
    10081 cggccacggc gaggggaccc aggaaaccag ccgaaccgac cagtgccacg acatcaccgt
    10141 cttcccggca cgctcgctgg ccgcgggcgc ctgctcgggc aacgggatca tcttcgacat
    10201 ttcgaacccg cgccagccgg tccgcatcga cgcggtgaac gaccccggat tttcctactg
    10261 gcactcggcg acgttcaaca acgacggcac caaggtcatc tttaccgacg agtggggcgg
    10321 cggagggcgg ccccgctgca gggtccagga cccgcgcaac tggggcgccg acgcctttta
    10381 cgacatcgtc ggcggcaagc ttcagtatcg aagccactac aagcttccgg cggttcagag
    10441 cgagcaggag aattgcgtcg cccacaatgg ctcgatcatc ccggtgccgg ggcgcgatat
    10501 cttcgtccag gcctggtacc agggcggcct ctcggtgatc gacttcaccg acagcgccaa
    10561 cccggtcgag atcgcctatt tcgaccgcgg gccggtcaat gccaaggaaa tggtgatggg
    10621 cggctactgg tcgtcctact ggtacaaggg gcggatctac ggaaccgaaa tcgctcgtgg
    10681 gctcgacgtc ttcgcgctgg agccgagcgc gagcatgacc gagaacgaga tcgcagccgc
    10741 gtcgctcgcc gactatggcg ggcgcttcaa cccgcagcag cagttcccgg taaggtggcc
    10801 cgcccacccg atcgtcgccc tggcctatct cgaccagctc gagcggagcc gtgcggtcgc
    10861 cccggcagca acggccgagc ttcgccaggc gctcggggag gcgaggagcg tgatcgacgg
    10921 gcggacgaaa aacggcggcc tcgctgcgcg gatcgaggcg ctcgcaggcg ggcttggcgt
    10981 ggctaccgcg gatgccgcgt cggccaagcg gctggccgga cttcgcgaga ccgccagcgg
    11041 aattgccgcg cagcttcgct gagcggcaag ggcggcggct ccggagggga gaagggggcc
    11101 gccgctcgcc cggctattgc cggactccgt gaagctcgcg cgccccgcgg tacatggtga
    11161 agcggttcac gactccgttt tcagggtgga agacgacccg catcggggtc ccgtcgatcc
    11221 ggaactcggt ctggctggtg ggccgcagca ccattgcctc gccgtccggt ggggtaacgg
    11281 tcagcttgcc gtcttcggag acagcgaccg tcacggtgac cgtttccgtc ttgtagatgc
    11341 cggcatagct ctccagcacc gcctccggca gcgccagctg cggcgggacc ggcccggtcc
    11401 gcaccgcggt ctcgggctcg acgctgtcgg gctcgtgaag ctccatcaca tgcgctccgt
    11461 ccggcttgcg gacgaagctc acccacaaca gcctgtcggg gccgaagaag aagcggtcgc
    11521 caccggctgc gaaggcctcc atccggctcc ctccgcgcga catgtagagc ttgccgtcct
    11581 ctgcggagaa caggaagggc ggtccgctgt cgggggcata ggcgccgaac aagggctcga
    11641 cggcgggcat ttccaccttt gcgggcgtga aggtcgggat cggctggccg agcgcgagcg
    11701 cggaaaggcg gcgggtgagg aggctagggt cggttgccgg atcgtcgctg ttggcgaaaa
    11761 ccgcgacgaa cagcttttcg gcggggatat agatgctgtc ggtgtcgagc ccggcgcccg
    11821 agccgccgtg cacaagcgcc tggcgaccgc gcaccttctg gagccggagt ccgaagccgt
    11881 aaggctcggt cgagccgtcg gcgaggcgag ccggtgacgt catctcgcgg tacaggtccg
    11941 gcctcacgac gcgcccgttg tggagcgcgt cggcccattt cgctatgtcg gtcacgcttg
    12001 cagcgatgcc gccggcggca tgggcgatgc tcatctgcgg gcgccgcacc gcgacgggcc
    12061 gtccgtcctc gtcggaatat ccgaccggca gcttcggcat ttgatccgcg tccgcataat
    12121 cgagcgtggt caatccgagc ggccgggcaa tgcgctccgc gatcacctcg tgccagggct
    12181 ttcccgtcat cttctcgacg atcgcgccga gcatcacata gccgccgtta ttatactccc
    12241 actgcgttcc aggctccgac ttggcgggca gcttgcggaa caggtccagc agttgctcgg
    12301 tggtccagtc cttgtcgcgg ttggccgcga tccatcccgg gaccttgctg aaatcctgga
    12361 ggccggacgt gtggttgagg aactggcgaa ccgtcgctcc ggaagtcggc gccggccaat
    12421 cgggaaagaa gcgcgacagc gggtcgtcga gcgacatctt cccctcggcg accagctgga
    12481 ggacgaccgc ggcagtgaat tgcttggtga tcgagccgag caggaacgga gtgtcggcag
    12541 tgatcggccg gcgggtctcg atatcggcaa gtccctgagc gcctgcgtag attacctccc
    12601 cgccgcgcgc gacgatcaag gcggagcccg ggccatcggc cggataggac gacttgagca
    12661 ggacgtcggc ctgacgggcg acatcggcca taacgacctc cgaagtctgg gcgagggcgc
    12721 ttgccggcac gacggcgagc gataccacgg ccgccgcgag agcggtgagg aaatggttgg
    12781 tcatggtcat ctatggccct ttttggtggt ttcgaggccg caaccctgcg ccattcctgc
    12841 atgagcggaa tgaggtcggg gtgaggattt gctgaaaagc tgcttccccg cagcgattcc
    12901 gcgtcccggc tttgcgccgc cgtgtccggt tttccttgaa aggcgtcctt gaaacgacga
    12961 tatctttcac atgtgaaggg ccaagcgacc ctcgcgtaag gagatgaaat gcagaaccag
    13021 ttcgacccgc gcaccacgtc cgcgacaagt gagggcgtga atgccgcaac ggtaggcgtt
    13081 ccgcgcgccg cccgcgatgc gggccttcgg tcctacatgc tgtcggtcta caactatatg
    13141 gcgtcgggcg tgctgctgac gggcatcgtc gcgcttctct tcgccaactc cggtcttgcc
    13201 gcacaggtgc tgacgacccc gctccgctgg ctgatcatcc tggcgccgct cggcttcgtg
    13261 atggcgatga gtttcggcct caaccggatg agcaccggca ccctgcaggc gctgttctgg
    13321 gcgttcgcgg tggcgatggg cctgtcgatg tcgtcgatct tcctggtctt caccggcacg
    13381 tcgattgcgc agacgttttt cgcggtcgcg gtcggcttcc ttgggcttag cctctacggc
    13441 tacacgacca agaaggacct tagcgggttc ggga
//
LOCUS       DATAKH010000052         4896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_24782,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000052 DATAKH010000000
VERSION     DATAKH010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4896
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24782"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VHN55_01920"
     CDS             <1..598
                     /locus_tag="VHN55_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEX2802731.1"
                     /translation="TEIVAVSIGPAKAQETLRTALAMGADRAILVQTSDEIGSEIEPL
                     AVAKILKGVVEEESPDLVLLGKQAIDDDSNQVGQMLGALLGWPQGTFASKVEASGSEL
                     NVTREIDGGLETVKLQTPAIVTTDLRLNEPRYASLPNIMKAKSKPLSTKSPADYGVDT
                     APRLETLKVTEPPKRQAGIKVGSVDELVEKLKALGVAK"
     gene            595..1524
                     /locus_tag="VHN55_01925"
     CDS             595..1524
                     /locus_tag="VHN55_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010542754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX2802732.1"
                     /translation="MKTLVLVEHDGSAIKDSTLATVGAAAKLGEVHLLVAGSNVGGVA
                     EAAKTIAGVGKVHVADSAHLEHQLAEDVAPVAARLMESHDALLAPSTTFGKNIAPRVA
                     ALLDVMQVSDILSVEGEDTFTRPIYAGNAIATVKSKDSKKVITVRTTAFEKAAADGGS
                     ADVEAVDAGSAFGKSSFVGAELSKSERPELTSAKIIVSGGRAFGSKEQFHGMLDPLAD
                     KLGAAVGASRAAVDAGYAPNDYQVGQTGKIVAPEVYIAIGISGAIQHLAGMKDSKTIV
                     AINKDEDCPIFQVADIGLVGDLFKIVPELTEKL"
     gene            complement(1599..2309)
                     /locus_tag="VHN55_01930"
     CDS             complement(1599..2309)
                     /locus_tag="VHN55_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802733.1"
                     /translation="MRKLTILAASAVAIAAAPASAQLLGNIGGTVGGALNGTVGGTVN
                     GAGSLGNVLNGVGNVAGSANGSLNGSGSVANSVTGIVSNSVSGVGGVDGRGDANGSGS
                     VGLAGVVTGATNAAGSVTGAANGAGSLAGTLTGAANGAGSLAGSATGAANGVGGVAGS
                     LSGAGNGAGNLAGIANGSGSASGKGSANGSAKGSAKGSAKGKASGRASTRTSGSPITV
                     GVSANANSNASASESVGY"
     gene            complement(2397..3731)
                     /locus_tag="VHN55_01935"
     CDS             complement(2397..3731)
                     /locus_tag="VHN55_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEX2802734.1"
                     /translation="MPKFVRNLTAAIVAAMLVAGSAGAQLLPGVGLPPLSLPPPVGSV
                     PVAGPVINSVLGGRQAQQVIRPTLDRVSGLPQQIAESGARSLLELRRMRLDALIRDNE
                     AVLEAGDDGEPVRRGMLLAADPDPISLQLALRAGFRLLADERDPVLGLRAVKLAVPRG
                     RSARSALRLLAKVAPRLEADYDHIYEPSGGSLAPLAGSLAAAAGSGNGRIIGMIDGGV
                     ASHPSLAKAAIEQNGFSGDARPTGHGTAVASLLVGDQRPFRGAATGAQLYVADIYGGN
                     RAAGSASAIAKALGWLAGKRPQVITVSLVGPANKLVARAIQIVRSRGIQVVAAVGNDG
                     PAAPPQYPASYPGVVSITAVDSNGRAIPEAGRAEHVDFAAPGADMAAALPGQGYAEIR
                     GTSFAAPLAAARLAVAGSPARLAAEARRGKGRVGRGIVCGECPIDPEAVNAK"
     gene            3802..4293
                     /locus_tag="VHN55_01940"
     CDS             3802..4293
                     /locus_tag="VHN55_01940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX2802735.1"
                     /translation="MNRNSSFEDELVSLLPRLRRFAHSLSRSPADADDLTQATIERAI
                     RSRDQWAPGTRLDSWMYRIMRNLWIDTARSRVRKAKFEAPPEDAATVGYEGAAEASAE
                     LSEVMAAMQTLPDEQREVVSLILIEGLGYREAAELLELPIGTVSSRLVRGRTALLGLV
                     GEQ"
     gene            4290..>4896
                     /locus_tag="VHN55_01945"
     CDS             4290..>4896
                     /locus_tag="VHN55_01945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX2802736.1"
                     /translation="MNADEKFFAWLDGELAGAEAAEIEARVAADPELAALAEQHRAMQ
                     ARLASAFDTVTATPVPERLRTVASLPESNVVDLSERRPRRLPALPQWAAIAATLVLGI
                     LVGTLMPRDSNAPVEVRKGTMYAGRDLDRALDTELASAPSDGPVRIGLTFRDRAGDIC
                     RSFTASAATGLACRHDGRWQVRGLFPVGEGQSGDYRMAAGMN"
BASE COUNT          855 a         1651 c         1644 g          746 t
ORIGIN      
        1 gaccgagatc gtcgccgtgt cgatcggccc ggccaaggcg caggagacgc ttcgcaccgc
       61 gcttgcgatg ggcgccgacc gggcgatcct cgtgcagacc tctgatgaaa ttggctccga
      121 gatcgagccg ctcgccgtcg ccaagatcct caagggcgtg gtcgaagagg agagccccga
      181 cctcgtactt ctcggcaagc aggctatcga cgacgacagc aaccaggtcg gccagatgct
      241 cggcgccttg ctcggctggc cgcaaggcac cttcgcctcg aaagtcgagg cctcgggcag
      301 cgagctcaac gtgacgcgcg agatcgacgg cgggctggag acagtgaagc ttcagacgcc
      361 cgcaatcgtc accaccgacc ttcggctgaa tgagccccgc tatgccagcc tgcccaacat
      421 catgaaggcc aagtcaaagc cgctctcgac caagtcgccc gccgattacg gagtcgacac
      481 cgcgccccgg ctcgagaccc ttaaggtaac ggagccgccc aagcgtcagg ccgggatcaa
      541 ggtcggctcg gtcgatgaac tcgtcgagaa gctcaaagcg ctgggagtcg cgaaatgaag
      601 acgctcgtcc tcgtcgagca tgacggaagc gcgatcaagg attcgacgct tgcgaccgtc
      661 ggagccgcgg ccaagctcgg cgaggttcat ttgctcgtcg ccggctcgaa tgtcggcggc
      721 gtcgccgaag ctgcgaagac gatcgctgga gtcggcaagg ttcacgtcgc cgattccgcc
      781 cacctcgagc accagctcgc cgaagatgtc gctccggtcg ctgcgaggct gatggaaagc
      841 cacgacgcac tgctcgcccc gtcgaccacc ttcggcaaga atatcgcgcc gcgagtcgcg
      901 gccctgctcg acgtgatgca ggtcagcgac atcctctcgg tcgagggcga ggacacgttc
      961 acccgcccga tctacgccgg caacgccatc gctacggtga agtcgaagga ctccaagaag
     1021 gtcatcacgg tccgcaccac cgcgttcgag aaggcggccg ccgacggcgg ttccgctgac
     1081 gtcgaggccg tcgacgcagg gtcggccttc ggcaagtcga gcttcgtcgg tgccgaactt
     1141 tccaaatcgg agcggcccga gctgaccagc gccaagatca tcgtttccgg aggccgcgcc
     1201 ttcggctcga aggagcaatt ccacgggatg ctcgacccct tggccgacaa gctcggcgcc
     1261 gcggtcgggg ccagccgggc ggcggtcgac gcgggctatg cgcccaacga ctaccaggtc
     1321 ggccaaaccg gcaagatcgt tgcccccgaa gtctatatcg cgatcggcat atccggagcg
     1381 atccagcacc tcgcggggat gaaggattcc aagaccatcg tcgccatcaa caaggacgag
     1441 gattgcccga tcttccaggt cgccgacatc ggcctcgtcg gcgacctgtt caagatcgtc
     1501 cccgagctga ccgagaagct ttaagagagg ggtggcccgc cgcgaagggg ctggggagcg
     1561 agcggcgggc cgggggcaat caatcagtga agccgcgatc agtagccgac ggactccgac
     1621 gcgctggcgt tggaattggc attggccgac acgccgacag tgattggcga gccagaggtg
     1681 cgggtcgacg ctcggccgga agccttgccc ttggcagagc ctttcgccga gcccttggcg
     1741 gagccattcg ccgagccctt gcccgacgcc gaaccggagc cgttggcgat gcccgcgaga
     1801 ttccccgcgc cgttgcctgc gcccgaaagc gagccagcga cgccgccgac gccgttggcg
     1861 gcaccggtcg ctgacccggc cagggatccc gcgccgttgg cggcaccggt caaggtcccg
     1921 gcaagcgatc ccgcaccgtt ggcagcaccg gtaaccgatc ccgcggcgtt ggtcgcgcca
     1981 gtcaccactc cggcaagtcc gacgcttccg gacccgttcg catcgcctcg gccatcgacg
     2041 ccgccgactc ccgaaacgct gttcgagacg atgccggtga cgctgttggc gaccgaaccg
     2101 ctgccgttga gcgagccatt ggccgagccc gcgacgttgc cgactccgtt gagcacgttg
     2161 ccgagcgagc cggcaccgtt gaccgttccg ccgactgtgc cgttcaaggc gccgccgacc
     2221 gtgccgccga tgttgccgag caattgcgcc gaagccggcg cggcggcgat cgcgaccgcc
     2281 gatgctgcaa gaatggtcag tttgcgcatt tttccttctc ctcgatatcg aggggccgcg
     2341 tgccccctcg attggagaac gacatgccgc gggcacttca tcccgcgggt ttcgaactat
     2401 ttcgcgttca ccgcctctgg atcgatcggg cactccccgc agacgatccc gcggccgacc
     2461 cggcctttgc cccgccgagc ctcggcggca aggcgcgccg gcgagcctgc gaccgcgagg
     2521 cgcgccgcag ccagcggcgc ggcgaagctg gtcccgcgaa tctccgcata gccctggccg
     2581 ggcagagccg cggccatgtc cgcacccggt gccgcaaagt cgacatgctc ggccctcccg
     2641 gcttccggaa tggctcggcc gttcgaatcc accgcggtta tcgaaacgac gccgggatag
     2701 gaggcgggat attgcggcgg agcggccggc ccgtcgttgc cgaccgctgc gacgacctgg
     2761 atcccgcgcg accggacgat ctggatggcc cgcgcgacga gcttgttcgc cggccccacg
     2821 aggctgaccg tgatcacttg cggacgcttc ccggcaagcc agccgagcgc ctttgcgatt
     2881 gcgcttgccg aaccggcggc gcgattgccg ccgtaaatat cggcaacgta gagctgggct
     2941 ccggtcgccg ctccgcgaaa gggacgctgg tcaccgacca aaagcgaggc gaccgcggtt
     3001 ccatggccgg tcggccgcgc atcgccggaa aagccgttct gctcgatggc cgctttggct
     3061 agcgaggggt gcgaggcgac accgccgtcg atcatcccga tgatccgtcc gtttccggat
     3121 ccggccgctg ctgcaagcga gcccgcgagc ggcgccagcg agccgccgct cggctcgtag
     3181 atatggtcgt aatcggcctc cagccgcgga gcgaccttgg ccagaagcct aagcgcagag
     3241 cgggcgcttc gcccccgcgg gacggccagc tttaccgcac gcaggccgag gaccgggtct
     3301 cgctcgtcgg caagaaggcg aaatccggcg cgcagggcga gctggagcga aatcggatcg
     3361 gggtcggctg caaggagcat tccgcgcctg acgggctcgc cgtcatcgcc ggcttccagc
     3421 accgcttcat tgtcgcggat cagcgcgtca agccgcatcc gtcgcagttc gagcaggctt
     3481 cgcgcacccg attcggcgat ctgctgtgga agaccggaga cacggtcgag cgtcggccga
     3541 atcacctgct gggcctgccg cccgcccagg acggagttga tcaccgggcc agcaacggga
     3601 acgctgccaa cgggaggcgg caacgaaagc ggcggaagtc cgactccggg aagcagctga
     3661 gcgccggcac tgcctgcgac gagcattgcc gcgacgattg cagcggtgag attgcggacg
     3721 aatttgggca ttggcggtcc tcaaactatg cctttgggga tgaaacgagg atgaagcatc
     3781 gtttcatccc tatgagggtg catgaaccga aactcgtcgt tcgaagacga acttgtctcg
     3841 ctgcttccgc ggctgcgccg gttcgcgcat tcgctgagca ggagtccggc cgacgccgac
     3901 gacctcaccc aggcgacaat cgagcgtgcg atccgttccc gcgaccagtg ggcgcccgga
     3961 acccggctcg acagctggat gtacaggatc atgcgcaacc tgtggatcga tacggcgcga
     4021 tcgcgcgtgc gcaaggcgaa gttcgaagcg cctccggagg acgcggcgac ggtcggctac
     4081 gagggcgcag ccgaggcatc ggccgaactt tccgaggtta tggcggcgat gcaaacgctg
     4141 ccggacgagc agcgcgaggt cgtgtcgctg atcctcatcg aaggcctcgg ctatcgcgag
     4201 gctgcggagc ttctcgagct tccgatcggg accgtatcaa gccggctagt tcgcggacga
     4261 acggcgctgc tcggactggt aggtgaacaa tgaacgccga cgagaaattc ttcgcctggc
     4321 tcgacgggga gcttgcaggc gccgaagcgg ccgagatcga ggcgcgggtc gcggccgacc
     4381 cggaactcgc cgctctcgcc gagcagcacc gggcaatgca ggcgcggctt gccagcgcgt
     4441 tcgataccgt aactgcgacg ccggtccccg agcggcttag gacggtagcg tcgcttccgg
     4501 agtcgaacgt cgtcgatctt tccgagcggc ggcctcggag gctcccggca ctgccgcaat
     4561 gggcggcgat cgcggcgacc cttgtgctcg gcatcttggt cgggaccctc atgccgcgcg
     4621 acagcaacgc tcccgtcgaa gtccgaaagg ggacgatgta cgccggccgc gatctcgacc
     4681 gggcgctgga caccgagctc gcgagcgcgc cttcggacgg cccggttcgg atagggctca
     4741 ctttccgcga tcgggcgggc gatatctgcc gaagctttac tgccagcgca gcaacgggcc
     4801 tcgcctgccg ccacgatggc cggtggcaag tccgcgggct gttcccggtc ggggagggcc
     4861 agtctggcga ctaccgaatg gcggcgggaa tgaatc
//
LOCUS       DATAKH010000053         4437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36150,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000053 DATAKH010000000
VERSION     DATAKH010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4437
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36150"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1197)
                     /locus_tag="VHN55_01950"
     CDS             complement(<1..1197)
                     /locus_tag="VHN55_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX2802737.1"
                     /translation="MSELPKTFDPAAIEKRWYDHWESNGLFRPDRADAEPWTIVMPPP
                     NVTGSLHIGHALDNTLQDVLTRRERMLGKDALWVVGTDHAGIATQMVVERNLASQGIS
                     RAEIGREAFLEHVWEWKAQSGGAITRQLRRLGASCDWSNERFTMDESYQRAVIHTFVE
                     LHKRGLIYRDKRLVNWDPKFQSAISDLEVETKEVHGKFWTLRYPLEDGSGAIEVATTR
                     PETMLADMAVAVHPDDERYAQMVGKKLKHPITGRLIPIITDEHADPELGSGAVKITPG
                     HDFNDFEVGKRAGFAPAEMLNMFDSQASVVQTQDGLIPQDLLGLSREEARLRVVELLE
                     SERALISVEDRVIPTPFGDRSGVVIEPWLTDQWYVDAKKLAGPAIEAVRSGKIRVVPE
                     TWKKTWF"
     gene            complement(1236..1712)
                     /locus_tag="VHN55_01955"
     CDS             complement(1236..1712)
                     /locus_tag="VHN55_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX2802738.1"
                     /translation="MAGGNRQQRTYLVVIDDSAEARVALRFAARRAAKTKGNVEVLAV
                     ASPQDFVQWGGVQAAIEEEQKLRIEGVVSGAVGEIFDEAGIKPAIVLRQGDAVKVVRE
                     YLVNREDIAALVLGAAPAGDPGPLVAHFTGKDAGKLPCPVMIIPGSLSDERLEQLS"
     gene            1831..3105
                     /locus_tag="VHN55_01960"
     CDS             1831..3105
                     /locus_tag="VHN55_01960"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020819234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HEX2802739.1"
                     /translation="MPIELKMPALSPTMEEGTLAKWLVKEGDEVASGDILAEIETDKA
                     TMEFEAVDEGKIAKILVAEGTDGVKVGQPIAILAGEGEDVKAAATEAPKAEAPKKEPE
                     AEPKKDEAQKAEAPSPAPPPAQKTEAQPSAPKGDRVKASPLARRIAEEKGVDLSSIQG
                     SGPGGRVVKADLEAAPAKAAAPKAAPAAAPVEPGETPHEVVKLSNMRKTIARRLTEAK
                     QTIPHIYLTVDIQLDALLKLRSELNAGLESRGVKLSVNDLLIKALAAALIEVPECNVS
                     FAGDNLIKYSRADISVAVSIPGGLITPIVANADGKTVSAIATEMKDLAARAKEGKLQP
                     EEYQGGTASISNMGMYGIKQFDAVINPPQGMIMAIGAGEKRPYVINDSLQIATVMSAT
                     GSFDHRAIDGADGAKLMQAFKRLVENPLGMLA"
     gene            3107..3322
                     /locus_tag="VHN55_01965"
     CDS             3107..3322
                     /locus_tag="VHN55_01965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802740.1"
                     /translation="MRWITALAIGAIIAFVLPTGFDGGTGNWMNSWAAWGTVRPLEGS
                     HNLLFSIPLFIGAAIAFRVIFSWHSSS"
     gene            3328..3699
                     /locus_tag="VHN55_01970"
     CDS             3328..3699
                     /locus_tag="VHN55_01970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017663897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HEX2802741.1"
                     /translation="MTGRTPLIRVTAMPSDTNPYGGVFGGWLMGQMGLACGSFASRHS
                     RGKAILVAADSIRFPGAMAVGDELSVYVELIKQGRTSLKLKAEAMGRTRDGDEEKVVA
                     EGEFTFVALDSEGQPREIAGA"
     gene            3706..>4437
                     /locus_tag="VHN55_01975"
     CDS             3706..>4437
                     /locus_tag="VHN55_01975"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX2802742.1"
                     /translation="MTTKVATLTLNPAIDISSDADVVRPTEKTRTFDEQIEAGGGGIN
                     VAKMLAEFGVPVRAIYLAGGATGGALNEILGRFAIERDCVRIEGDTRMSLAVYERSTK
                     AEYRFVPEGPEVREAEWREALDKAAAADCGYFVASGSLPRGVPEHFYVLLARALKKKG
                     VRYVLDTSGAELAAAVEEGGIFLLKPSHREFQELVGRKLDREATAAAAADIVARGKAS
                     YVAVTLGQEGAVLAGEGKIYDLPAVA"
BASE COUNT          787 a         1414 c         1501 g          735 t
ORIGIN      
        1 gaaccaggtc ttcttccacg tctcgggcac gacgcggatc ttgcccgagc ggacggcttc
       61 aatcgcgggg ccggcgagct tcttggcgtc gacataccat tggtcggtga gccacggctc
      121 gatcacgacg cccgagcggt cgccgaaggg cgttgggatc actcggtcct cgacggagat
      181 cagcgcgcgt tcggactcca aaagctcgac cacgcgcagc cttgcttcct cgcgcgatag
      241 gccgagcaag tcctgcggga tcagcccgtc ctgagtctga acgacggatg cctgcgaatc
      301 gaacatgttg agcatttcgg ccggcgcgaa gccggcgcgc tttccgactt cgaagtcgtt
      361 gaaatcgtgg cccggcgtga tcttgactgc gcccgagccg agctccgggt cggcatgctc
      421 gtccgtgatg atcgggatga ggcggccggt gatcgggtgc ttgagcttct tcccgaccat
      481 ttgggcgtag cgctcgtcgt ccgggtgaac cgcgacggcc atgtcggcga gcatcgtctc
      541 gggccgggtc gtcgcgacct ctatggcgcc gcttccatcc tccagcgggt aacgaagcgt
      601 ccagaacttg ccatggacct ctttcgtttc gacctcgagg tcgctgatcg cgctctggaa
      661 cttggggtcc cagttcacca ggcgcttgtc gcggtagatc agcccgcgct tgtggagctc
      721 gacgaaggtg tgaatgaccg cccgctggta gctctcgtcc atcgtgaagc gttcgttcga
      781 ccagtcgcac gacgcgccga ggcggcggag ctggcgggtg atggcgccgc cggactgcgc
      841 tttccattcc cagacgtgct cgaggaaggc ctcgcggccg atctccgccc gcgatatgcc
      901 ctggctggcg aggttgcgct cgaccaccat ctgcgtggcg atccccgcat ggtcggtacc
      961 gacgacccac agggcatctt ttccgagcat ccgctcacgg cgggtcagga cgtcctgcag
     1021 cgtgttgtcg agggcgtggc cgatatgcag cgagcctgtg acgttcggcg gaggcatcac
     1081 gatcgtccac ggctccgcgt ccgcgcgatc gggccggaac agcccgttcg actcccaatg
     1141 gtcgtaccag cgcttctcga tcgctgcggg atcgaaggtt ttcggcaatt cgctcatcgt
     1201 tgagcgcggt tagcggcgcg gcggtgcagc ggcaactagc tgagctgttc gagcctctcg
     1261 tcgctgagcg agccggggat gatcatcacc gggcacggga gcttgccggc gtccttgccg
     1321 gtgaagtggg cgaccagcgg acccgggtcg cccgccggcg cagctccgag caccagggcg
     1381 gcgatgtcct cgcggttgac cagatattcg cggacgacct tcaccgcgtc cccctggcgg
     1441 agcacgatgg cgggcttgat ccccgcctcg tcgaaaatct cgccgacggc gccgctgacg
     1501 actccttcga ttcgcagctt ctgctcctcc tcgatcgccg cctggactcc gccccactgg
     1561 acgaaatcct gtgggcttgc gaccgcgaga acctcgacat tgcccttggt cttggcggcc
     1621 cggcgagcgg cgaaacggag ggcgacgcgc gcctccgcgc tatcgtcgat aacgaccaga
     1681 taggtccgct gctggcgatt tccccctgcc atgctgccga cgctgcgtta aacctgcggc
     1741 aagcgcaagc gcttgaacgc ggtcagtcgc gcacttgacc ccgaccgccg cattggcttt
     1801 gtgccgctgc ctgcgcgtaa aaggaccatc atgcccatcg agctcaagat gcccgccctc
     1861 tccccgacga tggaagaagg cacgctcgcc aaatggctgg tcaaagaggg cgacgaggtc
     1921 gcaagcggcg acatcctggc cgagatcgaa accgacaagg cgacgatgga gttcgaggcc
     1981 gtcgacgagg gcaagatcgc gaaaatcctg gtcgccgaag gcacggacgg ggtgaaggtc
     2041 gggcagccga tcgcgattct cgcgggcgaa ggcgaggacg tgaaagcggc cgctacggaa
     2101 gcgccaaagg ccgaggctcc gaagaaggag ccggaagccg agccgaagaa ggacgaagcc
     2161 cagaaggccg aagcgccctc ccccgccccg ccgcccgcgc aaaagaccga agcgcagcca
     2221 agtgcgccga agggcgatcg ggtcaaggcg tcgcctctgg ctcgccggat cgcggaggag
     2281 aaaggcgtgg acctctcgtc gatccagggc agcggccccg gtggacgagt ggtaaaggcc
     2341 gacctcgaag cggctccggc gaaagcggca gctccaaaag ccgcgcccgc cgcggctccg
     2401 gtcgagccgg gcgagacccc gcacgaggtc gtcaagctct ccaacatgcg caagacgatc
     2461 gcgcgccgcc tcaccgaggc gaagcagacc atcccgcaca tctacctcac cgtcgatatc
     2521 cagctcgacg cgctcctgaa gctgcgcagc gaactcaacg cggggctgga gagccgtggg
     2581 gtcaagcttt cggtcaacga cctcctgatc aaggcgctcg ccgctgccct gatagaggtg
     2641 ccggagtgca acgtcagctt cgcgggcgac aacctgatca agtacagccg cgccgacatc
     2701 tcggtcgcgg tgtcgatccc gggcgggctg attacgccaa tcgtcgccaa tgccgacggc
     2761 aagactgtgt ccgcgatcgc gacggagatg aaggacctcg ctgcacgcgc gaaagagggc
     2821 aaactgcagc ccgaggaata tcagggcggc accgcctcca tcagcaacat gggcatgtac
     2881 gggatcaagc agttcgacgc ggtcatcaac ccgccgcagg ggatgatcat ggcgatcggc
     2941 gcgggcgaga agcggcccta tgtgataaac gactcgctgc agatcgccac ggtgatgagc
     3001 gcgacgggaa gcttcgatca tcgcgccatc gacggcgccg acggggccaa gctgatgcag
     3061 gcgttcaagc ggctggtcga gaacccgctg gggatgctgg cttgagatga ggtggatcac
     3121 cgcattggcg attggcgcga ttatcgcgtt cgtgctgccg acggggttcg acggcgggac
     3181 cggcaactgg atgaacagct gggccgcgtg gggaacagtc cgcccgctcg aaggctcgca
     3241 caacttgctg ttctcgatcc ctttattcat cggcgctgcc attgccttcc gggtgatctt
     3301 cagctggcac agcagcagct gactcccgtg accggccgca ccccgctgat tcgcgtcacc
     3361 gcgatgccgt cggacaccaa cccctatggc ggcgtgttcg gcgggtggtt gatggggcag
     3421 atggggctcg cctgcgggtc gttcgcgtcg cggcattcgc gggggaaggc gatcctggtt
     3481 gcggcggatt cgatcaggtt tcccggagcg atggcggtcg gggacgaact gtcggtctac
     3541 gtcgaactca tcaagcaggg acggacgtcg ctgaagctaa aggcggaagc gatggggcgt
     3601 actcgcgacg gcgacgagga gaaggtcgtg gcggagggcg agttcacctt cgtcgccctc
     3661 gattccgagg gccagccccg cgagattgcc ggtgcctgac cgttaatgac gacaaaggtc
     3721 gctactctta ccctcaaccc cgcaatcgac atctccagcg atgccgacgt ggttcggccg
     3781 accgaaaaga cccggacctt cgacgagcag atcgaggcgg ggggcggcgg gatcaacgtc
     3841 gctaagatgc tagccgagtt cggcgtgccg gtgcgcgcga tctatctcgc aggaggagcg
     3901 acgggcggcg ccctgaacga gattctcggc cgcttcgcca tcgagaggga ttgcgtccgg
     3961 atcgagggcg atacccgaat gagcctcgcg gtctacgaac ggtcgaccaa ggccgagtat
     4021 cgcttcgtcc ccgaaggccc ggaggtgcgc gaggccgagt ggcgcgaggc gctggacaag
     4081 gcggcggcgg ccgattgcgg gtacttcgtc gctagcggat cgcttccgcg cggagtcccg
     4141 gagcatttct acgtgcttct tgcacgcgcg ttgaagaaga agggtgtccg ctacgtcctc
     4201 gatacatccg gcgccgagct tgcggccgcg gtcgaggagg gcggaatctt cctcctcaag
     4261 ccgagccatc gcgagtttca ggagctcgtg ggacgcaagc tcgaccgaga agcgaccgct
     4321 gccgccgcgg ctgacatcgt tgcccgcgga aaggccagct atgtcgccgt cacgttgggc
     4381 caggaaggtg ccgtcctcgc gggggaaggg aagatctacg atttacccgc cgtcgca
//
LOCUS       DATAKH010000054         8226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_1201,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000054 DATAKH010000000
VERSION     DATAKH010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8226
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1201"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..977
                     /gene="panC"
                     /locus_tag="VHN55_01980"
     CDS             123..977
                     /gene="panC"
                     /locus_tag="VHN55_01980"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEX2802743.1"
                     /translation="MQTVRDIGQLGSALVALRAGGKRVALVPTMGALHAGHIALVDEA
                     KRRADRVVATIFVNPLQFGEGEDLDRYPRREKEDSKALDHAGCDLLWLPTPEQLYPAG
                     FSTKVSVPGLSKRWEGEARPGHFDGVATVVTKLINAVRPEVALFGEKDFQQLAILRRL
                     AIDLNLGVEIVGVPTVRDDDGLALSSRNAYLSEDERARAARLPRALQRAAAEIANGVR
                     VAEALEHASHALYDAGFGVVDYVALVDEATLEPISEGGEGTRLIAAATIGKTRLIDNL
                     PLAARKQG"
     gene            1051..1350
                     /locus_tag="VHN55_01985"
     CDS             1051..1350
                     /locus_tag="VHN55_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011543272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802744.1"
                     /translation="MAISEKAQEFLVRSRIADAERGDVDALFELGITYSTGRGGLAVD
                     LVEAHKWFNLAALSGSTRGQECRAEIAVEMTAREIAEAQRQARAWLGTTQQRYAA"
     gene            complement(1355..1873)
                     /locus_tag="VHN55_01990"
     CDS             complement(1355..1873)
                     /locus_tag="VHN55_01990"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX2802745.1"
                     /translation="MNRKILFAAAILAAATATAAAAQVRLPVIFPLGRDGAQPAPPSG
                     IPGAPMSTGAMQADLVVKAGSDTVYFPPDGSGLNPNSIATLTAQARWLIANPFAYVRL
                     EGHGGPLDSRDYALAIGDKRASAVRDFLVMQGVAPQRISVMSWGKERPGSVRVGPTVV
                     AAGARVVTVVVQ"
     gene            complement(1878..3200)
                     /gene="tolB"
                     /locus_tag="VHN55_01995"
     CDS             complement(1878..3200)
                     /gene="tolB"
                     /locus_tag="VHN55_01995"
                     /inference="COORDINATES: protein motif:HMM:TIGR02800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HEX2802746.1"
                     /translation="MIPTALLKRLLLLLLPLLGLGTAPALAQERSPTASVIAVPPFAI
                     TKNVDTDAGNTWSIANQIADLISADLNTTSSFIVANVKDIRIPSYPEVTAPSYPTWRA
                     ARVKLLLSGFVSARNDGRLTIGCYLYDVQSGREVARQGFAVTPGEWRRAAHRCADAAY
                     VEATGNSPRFDSRIAYVAESGSPDSPVKRLAVMDFDGASHSYVTEGDATVMSPSWSPT
                     GNRVAYSSFRDGRLHVRIVDLATRQDRPLLPVNEPSFGPAFSPDGRAIALSMSAEGNT
                     DIFTVDSSGGYPRRLTTSQAIDTSPSYSPDGNRIAFVSDRSGSPQIYVMDFDGSNQRR
                     ISFAPGAYGSPTWSPDGERIAFTRTEGPTSRIGTIAAGGSGERIVTSGPRDEEPEWSP
                     DGSKIVFQQYDAATRRTLLATVPADGGEVRAIPTPQGGSDPAWAGRKE"
     gene            complement(3197..3652)
                     /locus_tag="VHN55_02000"
     CDS             complement(3197..3652)
                     /locus_tag="VHN55_02000"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010184021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HEX2802747.1"
                     /translation="MNRDLDQPYRGGFVGREHHFALTVYFEDTDTAGIVYYANYLKFM
                     ERARSDMIRASGVDLVAELRESGRTYAVADVAIKYRKPAYLGDDLVVISTVEAVRAVS
                     VLIQQRVMRGAELLSDANVTAAFLTADQRPQRQPRQWVERFQAIATGER"
     gene            3755..4201
                     /locus_tag="VHN55_02005"
     CDS             3755..4201
                     /locus_tag="VHN55_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802748.1"
                     /translation="MNSKSDAARAEELSRKRARALPVLGVLFISQQLVFFSSPARDRM
                     VDHVHIGAWLILSVVMLLALTTGGGWIYPRSVRQLANDEATRVHRDDAFRYGFLAAMV
                     ACIALYVVTLFEPFGEREAIHLILTVGIGMALLRFGLLERRAMRDA"
     gene            4194..4400
                     /locus_tag="VHN55_02010"
     CDS             4194..4400
                     /locus_tag="VHN55_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX2802749.1"
                     /translation="MPERLYNRLKELRTEAGLTQAELAERVGVTRKTVNTVENLVFTP
                     SALLALKLAEALNVPVEELFWIER"
     gene            complement(4360..5523)
                     /locus_tag="VHN55_02015"
     CDS             complement(4360..5523)
                     /locus_tag="VHN55_02015"
                     /inference="COORDINATES: protein motif:HMM:NF022732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3089 domain-containing protein"
                     /protein_id="HEX2802750.1"
                     /translation="MIPQFFSALAALLDPAPAKASPPPPAIDYSMHRSWLCLPTRKTI
                     CSTPLATTALNANGYGSTGLSTVAKDPPIDCFYVYPTVSRDQGMNSDMNAGPEEELMA
                     AAQAARFSSVCRVFAPVYRQMTVASIAAAMAGGDVTKAAMLAYSDVSNAWRNYIATRN
                     NGRPFVLIGHSQGSLMLQELIKREIEGKPVAKRMIRAIIPGFNVLVPEGKRVGGTFKS
                     TPLCASQGETGCVMAWVSYRENRAPPEGAMFGFAPAPGMTVACTNPANPGSTGWEALD
                     SYWYTRSSYPVAGGPIGWSTEGAPATPYVRTDGLVSAKCVNDGRRGYLALRTNHKTGD
                     KRTDRIGGEVGIGGLFLPGWGMHLADMPIAQGDLIRQIGELSARSRTAPRPAR"
     gene            complement(5520..6563)
                     /gene="ruvB"
                     /locus_tag="VHN55_02020"
     CDS             complement(5520..6563)
                     /gene="ruvB"
                     /locus_tag="VHN55_02020"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017670396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEX2802751.1"
                     /translation="MATDPARITTPERTAEDTDFALRPKSLDEFIGQKAARENLRVFV
                     HAAKGRGEALDHVLLHGPPGLGKTTLAGILAREMGVGFRATSGPVIAKSGDLAALLTN
                     LEDGDVLFIDEIHRLNPAVEEVLYPAMEDRALDLMIGEGPSARSVRIDLPRFTLIGAT
                     TRQGLLTTPLRDRFGIPVRLNFYSVEELEQVVRRAAKLLDAPVTDDGAHEIAKRSRGT
                     PRIAGRLLRRVRDFAHASGAKDIDAKTADAALDRLEIDALGLDAMDRRYLTMIADLYG
                     GGPVGIETLAAGLSEPRDTIEDVIEPFLIQLGLIARTARGRCLNGRGWTHLGLNPPPT
                     SQSGLFDVESEPK"
     gene            complement(6573..7163)
                     /gene="ruvA"
                     /locus_tag="VHN55_02025"
     CDS             complement(6573..7163)
                     /gene="ruvA"
                     /locus_tag="VHN55_02025"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEX2802752.1"
                     /translation="MIARLSGILAETSADTAVIDVGGVGYQVHASGRTLDALGPIGGE
                     VLILTELQVREDAWTLFGFGSVAERDSFRALTSIQGVGGRLALAILSALSPDELARAV
                     AQEDKAMIGRANGVGPKLAARIANELKGKLGVTGLGGAAPAPRAGAAADALSALANLG
                     FKPADASAAVNAAQDELGDDASLDALVRLALRKAAK"
     gene            complement(7202..>8226)
                     /locus_tag="VHN55_02030"
     CDS             complement(7202..>8226)
                     /locus_tag="VHN55_02030"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX2802753.1"
                     /translation="ATPPLPMPPIPMNASWLLAEPEPMLVSTGDAQVDEYRRKLIEEG
                     DPVWRPIFRRLLADVRADPSIIQRYDAMRAIDTPTEYLRFYLTPQRIADGRALYDSLE
                     GADLPEDGTPLELKLALWGMLSNYSKRPDFDLLSAMVTLAAHGKLHQMTAFPIHDAAM
                     LIVDRTVDRARLRGYDSGRMGDVQMTPDFYSRLRRDGDGDGFADIWDNRADIFANLWI
                     DMTGTDGPLIIPVKPHDFDSADPGQSRLIQEMTTQSVMATYFERWDGKPWTRTTGGWS
                     GRYVEPFGKQGPAFLLPMAATPLNFRDPYMEGYSERGDGFAIAAALLAEAIAGRPTPD
                     MDLMTR"
BASE COUNT         1360 a         2639 c         2849 g         1378 t
ORIGIN      
        1 ccgccctttt cgttggcgaa tacgatgaaa tgcggctgga ccattccggc cccccttgaa
       61 cttgaccccc cgcgcgtcga gaagcgcggc ccgacccgca gcttaccgga ggcgaatccg
      121 cggtgcaaac agtccgtgac atcggccagc tgggaagcgc gctcgtcgcc cttcgcgcgg
      181 gaggcaagcg agtcgcgctg gttccgacca tgggggcgct ccatgccggc catatcgccc
      241 tggtcgacga agcgaagcgc cgggccgacc gggtcgtcgc gaccatcttc gtcaacccgc
      301 tgcaattcgg cgaaggcgag gacctcgatc gctacccgag gcgcgagaag gaggattcca
      361 aggcgctgga ccacgccggc tgcgaccttc tgtggctgcc cacgcccgag cagctctacc
      421 cggccggctt ttcgaccaag gtgtccgtgc cggggcttag caagcgctgg gaaggcgaag
      481 cgcggcccgg ccatttcgac ggcgtcgcca ccgtggtcac caagctgatc aatgccgtcc
      541 ggccggaagt cgcgctgttc ggggagaagg attttcagca gctggcgatc ctccggcggc
      601 tcgcgatcga cctcaacctc ggagtcgaga tcgtcggagt gccaacggta cgggacgatg
      661 acggcctcgc gctgtcgtcg cgcaacgcct acctgtcgga ggacgagcgg gcgcgggcgg
      721 cccggcttcc gcgcgcgctc cagcgcgctg ccgctgaaat cgccaatggc gtccgggtcg
      781 cggaggcgct ggagcacgcc agccatgcgc tttacgatgc aggcttcggg gtcgtcgatt
      841 atgtcgcgtt ggtcgacgag gcgactctcg agccgatcag cgaaggcggc gagggcaccc
      901 ggctgatcgc cgcggctacc atcggcaaga ctcgcctgat cgacaatttg ccgcttgcag
      961 cgcgaaaaca gggttaaccg cgttaaccat ttcttcggga atgcgcgccg aaactcccct
     1021 taacgggaaa acagggggag tttggccgtc atggcaatca gtgaaaaagc gcaggagttc
     1081 ctggtccgga gccgcatcgc cgacgccgag cgaggtgacg tcgatgcgct gttcgagctt
     1141 gggatcacct attcgaccgg ccgcggcggt ctcgccgtcg acctcgtcga agcgcacaaa
     1201 tggttcaacc tcgcggcgct gtcgggatcg acccgcggcc aggagtgcag ggcggagatc
     1261 gcggtcgaaa tgacggcccg tgaaatcgcc gaagcccagc gccaggcacg ggcgtggctg
     1321 gggacgacac agcagcgcta cgccgcgtaa ttccttattg gacgacgacg gtcacgaccc
     1381 tcgcgccggc ggcgacgacg gtgggcccga ccctgacgga gccggggcgc tccttgcccc
     1441 agctcatcac cgaaatccgc tgcggggcga ctccctgcat gacgaggaaa tcgcggaccg
     1501 cgctggcgcg cttgtcgccg atcgcgagcg catagtcgcg gctgtccagc ggaccgccgt
     1561 ggccttccag ccggacataa gcgaatggat tggcgatcag ccaccgcgcc tgcgccgtca
     1621 gggtggcaat cgaattgggg ttgagcccgg acccgtccgg cgggaagtag accgtgtcgc
     1681 ttcccgcctt gacgacgaga tcggcctgca tggcgcccgt tgacatcggt gctccgggaa
     1741 ttcctgacgg cggggccggc tgggcgccgt cgcggccgag cgggaagatc accggcagcc
     1801 tgacctgcgc ggcggcggcg gttgcggtcg cggctgccag gatagcggcg gcgaagagga
     1861 tcttgcggtt cattgcgcta ctccttccgc ccagcccagg cagggtcgga tccgccttgc
     1921 ggggtgggaa tggcgcgcac ttccccacca tccgcgggca cggtcgcgag caatgtccgc
     1981 cgggttgcgg cgtcgtattg ctggaacacg attttgcttc cgtcgggact ccactccggc
     2041 tcctcgtcgc gggggccgct ggtgacgata cgctcgcccg atccgccggc ggcaattgtc
     2101 ccgatccgcg acgtcgggcc ttcggtccgg gtgaaggcga tccgctcgcc atccgggctc
     2161 catgtcggcg acccataggc gcccggcgcg aagctgatcc gccgttggtt ggagccgtcg
     2221 aagtccatca cgtagatttg cgggcttccc gagcggtcgc tgacgaaggc gatccggttg
     2281 ccgtccggcg aatagctggg gctggtatcg atcgcctgcg acgtggtcag ccggcgcgga
     2341 tagccgccag aggagtcgac ggtgaaaata tcggtgttcc cctccgccga catcgacagg
     2401 gcgattgccc gcccgtcggg cgaaaaggcc ggaccgaaac ttggttcgtt gactggaagg
     2461 agcggccggt cctgcctggt cgccaggtcg acgatccgga catggaggcg cccgtcgcga
     2521 aagctggaat aggcgaccct gttgccggtc ggcgaccagc tgggactcat caccgtcgcg
     2581 tcgccttcgg tgacatagct gtggctggct ccgtcgaagt ccatgaccgc gagccgcttg
     2641 accggcgagt cggggcttcc gctctcggca acataggcga tccgactgtc gaagcgcggc
     2701 gaattgccgg ttgcttcgac ataagcggcg tcggcgcagc ggtgggccgc ccggcgccat
     2761 tcgcccggag tgaccgcaaa gccttgccga gccacctcgc gtcccgactg aacgtcatag
     2821 aggtagcagc cgatcgtcag ccgcccgtcg ttcctggcgc tgacgaagcc ggacaggagc
     2881 agcttcaccc gcgccgcccg ccacgtcggg taagatggcg cggtgacctc cggataggag
     2941 ggtatgcgga tgtccttgac gttggcgacg atgaagctcg aggtggtgtt gagatcggcg
     3001 gagatcaggt cggcgatctg gttggcgatc gaccaggtgt tgcccgcatc ggtgtcgaca
     3061 ttcttcgtga tcgcgaatgg gggaacggcg atcaccgaag cggtcggcga gcgctcctga
     3121 gccagtgccg gggcggtgcc aagaccgagc agcggtagca agagaaggag cagccgtttc
     3181 aacaaagcag tcggaatcat ctttctccgg ttgcgattgc ctggaaccgc tcgacccact
     3241 gacgcggctg gcgctgcggc cgctggtccg cggtaaggaa ggcggcggtc acgttcgcgt
     3301 cgctcagtaa ttccgccccg cgcatgactc tctgctgaat cagcaccgag actgcgcgga
     3361 ccgcctcgac agtgctgatc acgaccaggt catcgcccag ataggccggc ttgcggtatt
     3421 tgatggcgac atcggcgacc gcataagtcc gccccgattc gcgcagctca gcaaccaagt
     3481 cgactcccga ggcgcggatc atgtccgacc gcgcccgctc catgaacttc agataattgg
     3541 cgtaatagac gattccggcg gtgtcggtgt cctcgaaata gacagtcaac gcgaaatgat
     3601 gctcgcggcc gacaaagccg ccgcggtagg gctggtcgag atcgcggttc atggcccggg
     3661 ctctagcgac gcgactcggc aggtcaaaca tccgcttgac agccgtgtaa cgcaaaggtt
     3721 acatgtaacc cacacgttac aaaggactca cgaaatgaac agcaaatccg atgcggccag
     3781 ggccgaggaa ctgagccgca agcgggcgcg ggccctgccc gtcctcggcg tcctcttcat
     3841 aagccagcag ctcgtctttt tctccagccc ggcgcgggac cgaatggtcg atcacgtcca
     3901 catcggtgcc tggctcatcc tgtccgtggt gatgctcctc gccctgacga ccggcggagg
     3961 ctggatttat ccgcgttccg tccggcagct cgccaacgac gaggcgacac gggtccaccg
     4021 ggacgatgcc ttccgctacg gtttcctggc ggcgatggtc gcctgcatcg ctctctacgt
     4081 cgtgacgctt ttcgaaccat tcggagagcg cgaggcgatc cacctgatcc tcaccgtcgg
     4141 aattggcatg gccttgcttc gtttcggcct gctcgaacgg cgcgcgatgc gcgatgcctg
     4201 aaagattgta caaccgcctg aaggaattgc ggaccgaagc cggccttacc caagccgaac
     4261 ttgccgagcg ggtcggagtg acgcgcaaga cggtgaacac ggtcgaaaat ctggtcttca
     4321 cgccgtccgc gctgctggca ctgaagctgg cggaagcgct caacgtgccg gtcgaggagc
     4381 tgttctggat cgagcgctga gctcgccgat ctggcggatc aggtcgccct gggcgatcgg
     4441 catgtcggcg aggtgcattc cccagccggg gaggaacagg ccgccgatcc ccacttcgcc
     4501 gccgattcga tccgttcgct tgtcgccggt cttgtgattg gttcgaagcg ccaggtaacc
     4561 gcggcggccg tcgttgacgc acttcgccga caccagcccg tcggtgcgga cgtagggcgt
     4621 tgccggagcg ccttcggtcg accagccgat cggcccgccc gcgacgggat agctcgaccg
     4681 ggtataccaa tagctgtcca gcgcttccca gccggtcgaa ccgggattgg cgggattggt
     4741 gcaggcgacc gtcattcccg gcgccggcgc gaagccgaac atcgcccctt ccggcggcgc
     4801 tctgttctcg cggtagctga cccaggccat cacgcagccg gtctcgccct gcgacgcgca
     4861 aagcggagtc gacttgaacg tgccgccgac ccgtttccct tcgggcacca ggacattgaa
     4921 gccggggatg atcgctcgga tcatccgctt cgcgaccggc ttgccctcga tctcgcgctt
     4981 gatcagctcc tgcagcatca gcgagccctg gctgtggccg atcaggacga acgggcgtcc
     5041 gttgttgcgg gtcgcgatat agttgcgcca ggcattagag acatcggaat aagcgagcat
     5101 cgcggccttg gtgacgtcgc cgcccgccat cgccgcggcg atcgaagcga cggtcatctg
     5161 ccggtagaca ggagcgaaca cccggcacac cgaagagaag cgagcggcct gggccgcggc
     5221 catcaactcc tcttccggtc ccgcattcat gtcgctgttc atgccctggt cgcgcgacac
     5281 cgtcgggtag acgtagaaac agtcgatcgg cgggtccttt gcgaccgtgc ttagcccggt
     5341 cgagccatag ccgttcgcgt tgagcgcggt cgtcgcgagc ggggtggagc agatggtctt
     5401 gcgggtcggc aggcacagcc agctgcggtg catgctgtag tcgattgcgg gcggaggcgg
     5461 agacgccttt gcgggcgccg ggtcgagaag cgcggcgagt gcggaaaaga actgcggaat
     5521 cacttcggtt cgctctccac gtcgaacagg cccgactggc tcgtcggcgg cgggttgagc
     5581 ccgagatggg tccagccgcg gccgttgaga cagcgccccc ttgcggttcg ggcgatgagg
     5641 ccgagctgaa tgaggaaggg ctcgatcacg tcctcgatcg tgtcgcgcgg ctctgacagg
     5701 ccggcggcga gagtctcgat cccgaccgga ccgccgccgt agaggtcggc gatcatcgtc
     5761 agatagcgcc ggtccatcgc gtcgagaccg agcgcgtcga tctcgagccg gtcgagagcg
     5821 gcgtcggccg tctttgcgtc aatgtccttc gcgcccgagg catgggcgaa gtcgcggacc
     5881 cggcggagga gacggccggc gatccgagga gtcccgcgcg aacgcttggc gatttcgtgg
     5941 gcgccgtcgt cggtgaccgg ggcgtcgagc agcttcgccg ctcggcggac gacctgctcc
     6001 agctcctcga ccgaatagaa attgaggcgc accgggattc cgaagcggtc gcgaagcggc
     6061 gtcgtcagca gcccctgccg agtcgtcgcc ccgatcaggg tgaagcgcgg aaggtcgatc
     6121 cgcaccgagc gagcggacgg tccctcgccg atcatcaggt cgagcgcccg gtcttccatg
     6181 gccggataga gcacttcctc gaccgcggga ttgagccggt ggatctcgtc tatgaagagg
     6241 acgtcgccat cctcgaggtt ggtcaggagc gcggcgagat cacccgactt ggcgattacc
     6301 ggcccggacg tggcgcggaa gccgacgccc atctcacggg cgaggattcc ggccagcgtg
     6361 gtcttgccga gccccggcgg gccgtggagc aggacatggt cgagcgcttc gccgcgccct
     6421 ttggcagcgt ggacgaacac tcgaaggttt tcccgcgccg ccttctggcc gatgaactcg
     6481 tcgaggcttt tcgggcgaag cgcgaagtct gtgtcctcgg cggttcgctc gggcgtcgtg
     6541 attcgggcgg ggtcggttgc catgtgccga acctacttcg cggctttgcg caaggcgagg
     6601 cgcaccagcg cgtccaggct cgcgtcatca ccaagctcgt cctgggcggc gttgacggcg
     6661 gcgctggcgt cggcgggctt gaagccgagg ttggcgaggg cggagagggc gtcggcggcg
     6721 gctccggcgc gtggcgcggg agcggctccg ccgaggccgg tgactccgag cttgcccttg
     6781 agctcgttgg cgatccgggc ggcaagcttg gggccgaccc cgttggcgcg gccgatcatc
     6841 gccttgtcct cctgcgccac cgcccgggcg agctcgtcgg gcgagagcgc cgacaggatc
     6901 gccagcgcaa ggcggccgcc gaccccctgg atcgaggtga gggcgcggaa ggaatcgcgc
     6961 tcagcgacgg agccgaagcc gaacagggtc caggcgtcct cgcggacctg gagctcggtc
     7021 aggatcagca cctctccgcc gatcggcccg agcgcatcga gcgttcggcc cgacgcgtgg
     7081 acctggtaac cgaccccgcc aacgtcgatc acggcggtgt cggcgctggt ttcggcaagg
     7141 attccggaga ggcgggcgat catgccctag gctagggcgg accgggcgcg ccgccaaggg
     7201 gtcaacgggt catcaggtcc atgtcgggag tcgggcggcc ggcgatcgcc tcggcgagca
     7261 gtgcggcggc gatcgcaaag ccgtcgccgc gctccgaata gccctccatg tacgggtcgc
     7321 ggaagttgag cggggtcgcc gccatcggca gcaggaaggc ggggccttgc ttgccgaacg
     7381 gctcgacgta gcggcccgac catccgcccg tcgtgcgggt ccacggcttc ccgtcccagc
     7441 gctcgaaata ggtcgccatc accgactggg tcgtcatctc ctggatcaac cgcgactgcc
     7501 cgggatcggc ggagtcgaaa tcgtgcggct tgaccgggat gatcagcggc ccgtcggtgc
     7561 cggtcatgtc gatccacagg ttggcgaaga tgtcggctcg gttgtcccag atgtcggcga
     7621 agccgtcgcc gtcgccgtcg cgccgcaacc gcgagtagaa gtcgggcgtc atctggacgt
     7681 cgcccatccg gccgctgtcg tagccgcgaa gcctggcgcg atcgacggtt cggtcgacga
     7741 tgagcattgc cgcatcgtga atcgggaagg ccgtcatctg gtgaagcttg ccatgggctg
     7801 cgagggtcac catcgccgaa agcaggtcga aatcaggccg cttgctgtaa ttggacagca
     7861 ttccccacag ggcgagcttg agctcgagcg gagtgccgtc ctcgggaaga tcggcaccct
     7921 cgagcgagtc gtagagagcg cgcccgtcgg caatccgctg cggcgtgagg tagaagcgaa
     7981 gatattcggt cggcgtgtcg atcgcgcgca tcgcgtcgta gcgctggatg atcgatggat
     8041 cggcacggac atcggcaagg agacgtcgga agatcggtcg ccaaaccgga tcgccttcct
     8101 caatcagctt gcggcgatat tcgtcgactt gcgcatcgcc tgtgctcacc aacatcggct
     8161 cgggttcggc gaggagccac gacgcgttca tggggatcgg cggcatcgga agtggcgggg
     8221 tggctg
//
LOCUS       DATAKH010000055         8407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_8926,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000055 DATAKH010000000
VERSION     DATAKH010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8407
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8926"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..318)
                     /locus_tag="VHN55_02035"
     CDS             complement(118..318)
                     /locus_tag="VHN55_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008832625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system HicB family antitoxin"
                     /protein_id="HEX2802754.1"
                     /translation="MADSGDRKAFPLRVDPALWSAVERCAAADLRSANAEVEVLLREA
                     LTARGVKLKAPEPRKRGRPAKK"
     gene            complement(329..1231)
                     /locus_tag="VHN55_02040"
     CDS             complement(329..1231)
                     /locus_tag="VHN55_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX2802755.1"
                     /translation="MSAQEAIALRHSSERAASTLSGYPMLLVALLGIAMDAYGVVRLA
                     NGEGEILSFVLIGAGVLVFTLAVAGLYMLQPNQAAVITLFGDYRGSDRSTGLRWVWPW
                     MLRPKISIRIHNFTSDRIKVNDLRGNPIEIAANVVWRVSDTAQAMFDVADYSDFIKVQ
                     IESAVRTIGSKYPYDDIEHQEVTLRSSAEVVNADLESELQERVAKAGISIDECRIMHL
                     AYAQEIAQAMLRRQQAEAIIAARAKLVQGAVSMVETALQQLSEKEVVELDDERRAAMV
                     SNLMVVLCSDRETQPVVNTGTLYQ"
     gene            1343..2275
                     /locus_tag="VHN55_02045"
     CDS             1343..2275
                     /locus_tag="VHN55_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase"
                     /protein_id="HEX2802756.1"
                     /translation="MRKTDWKLVIHGGAGIIKRSGTTPEKDGEIRAALDHALATGSAV
                     LADGGSAVDAVEATVRELEDDPHFNAGRGAVFTYDGRNELDAAIMDGRDRSAGAVTGV
                     METRHPVSLARAVKEHSPHVLLRGRGADQFSRDQGLEQVENSWFATAERRRQLDEMIA
                     AKGDHFDAELKYGTVGAVALDSDGHVAAATSTGGLTGKRWGRIGDSPLIGAGTYADDR
                     SAAVSATGAGEYFIRALAAYQAAELVKNGGQSLQEALQHTLADIQSLGGTGGLIAVSA
                     IGGTAWGFTTPGMYRGCADSNGRKVALYSEDEER"
     gene            complement(2251..3387)
                     /locus_tag="VHN55_02050"
     CDS             complement(2251..3387)
                     /locus_tag="VHN55_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2802757.1"
                     /translation="MADRESEVLARIAPGISALDAADWDRVAGDHPFVSHAFLRALED
                     SASVGPGTGWTPAPILVEEDGRLEAAAPAYLKTHSQGEYVFDHGWADAWERAGRAYYP
                     KLQVAVPFTPVSGPRLLGSRPQQLLAAVEAVTVQNGLSSAHATFIEGADAAEAERRGW
                     LIRDGIQYHWHNRGYRDFDDFLDSLTSRRRKTIRKERAAAREGLEFRALTGSDIGADE
                     WDWMWRFYQDTGSRKWGRPYLTRDFFDRIGASMGDKLLLFLACRGGRPIAGALNVIGP
                     DALYGRYWGTVDEIRFLHFELSYYQAIDWAIGRGLKSVQAGAQGEHKLSRGYEPVVTR
                     SAHFIVDPGFRSAVADFLAQERVAVAGEVEWLRRELPYRSSSSE"
     gene            complement(3416..3877)
                     /locus_tag="VHN55_02055"
     CDS             complement(3416..3877)
                     /locus_tag="VHN55_02055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX2802758.1"
                     /translation="MSIDDRLAELGITLPEPAAPVASYVPAVEIGGLLHISGQISVSE
                     DGNLITGRVGEDLNLERATAAARRCGIMLLAQMQAALGSLDRVERVVKLGVFVNSAAS
                     FTDQPKVANGASELMQEVFGEAGRHARSAVGVPVLPLGVAVEIDAIVAVKP"
     gene            complement(3909..4655)
                     /locus_tag="VHN55_02060"
     CDS             complement(3909..4655)
                     /locus_tag="VHN55_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2802759.1"
                     /translation="MTKTILITGATAGIGKAAARRFASGGWKVVGTGRRADRLKALAD
                     ELGDSFLPLEIDMRERSAVESIAELSPPWGEIDLLLNNAGLAPPTDPLPETDWELIET
                     VIGTNVNGLVALTRALLPGLIGRKGAIINLSSVAATYPYKGGAVYAGTKAFVRQFSLD
                     LRCDLAGTGVRVTSIEPGMVETEFTIVRTGGDKAASDALYADMDPMTAQDIAETIWWV
                     ATLPPHVNVNAIELMPTSQSFAGFAVARKT"
     gene            complement(4655..4924)
                     /locus_tag="VHN55_02065"
     CDS             complement(4655..4924)
                     /locus_tag="VHN55_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3572 family protein"
                     /protein_id="HEX2802760.1"
                     /translation="MAEATPTDAHALALLALATAVSDERRARRFLDLTGIGTGELRAR
                     AADPALLAALIRFLEAHEPDLVAVAEAMDLPPEKLVAARRDLEEL"
     gene            4962..5378
                     /locus_tag="VHN55_02070"
     CDS             4962..5378
                     /locus_tag="VHN55_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2802761.1"
                     /translation="MAKILIVEDNALNVKLFCDLLAAHGHEPRPVTDGRFALEQAREF
                     GPDLVITDIQLPHVTGLDLIRLMREDKGLKEVPIMAVTAYAAATDEERIRAAGAQAYV
                     SKPISVAKFVAQVNELLGIEDAGPMAPAFDRGSAPG"
     gene            complement(5404..5571)
                     /gene="rpmG"
                     /locus_tag="VHN55_02075"
     CDS             complement(5404..5571)
                     /gene="rpmG"
                     /locus_tag="VHN55_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010233410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEX2802762.1"
                     /translation="MAKPATVKIKLVSSADTGFFYVTKKNPRNQTEKMSFRKYDPVAR
                     KHVEFKEAKIN"
     gene            5734..6042
                     /locus_tag="VHN55_02080"
     CDS             5734..6042
                     /locus_tag="VHN55_02080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802763.1"
                     /translation="MAGEKLEPVRNQIGERLAEFSNRAERLSPLDIHARMDAIRQIAA
                     DNGLDALESLMHRSAQLALLPGHRIATRCCLEHVDEALDSHSASDRTAILAALALRLN
                     "
     gene            6082..7680
                     /locus_tag="VHN55_02085"
     CDS             6082..7680
                     /locus_tag="VHN55_02085"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cisplatin damage response ATP-dependent DNA
                     ligase"
                     /protein_id="HEX2802764.1"
                     /translation="MRAFSQLLDDLAYTRSRNTKLKLIGDYLKQAPDPDRGIALAALT
                     GSLSIPTVKGAAVRAVAEERVDPVLLYMSRDYVGDMAETVSLLWPGPDGDPELDDGTV
                     SISDAVERLASAGKVNAPRVLAEMLDHLDASGRFALLKLATGNLRIGVSARLAKQALA
                     NAFGLEVDAVEEVWHGLAPPYPELFAWAEGHRPQPTPRDVPVFRPFMLAHPLEETVVS
                     LDDYAAEWKWDGIRIQLVRTAGQTRLYSRTGDDVSGSFPEIAEAFESDGVLDGELLVR
                     GSGQGSADVHGGAAASFNALQQRLGRKTVSARMREQYPAFVRLYDILFEGEEDLRGLP
                     WTDRRRRLEAFVPKLDTDRFDLSGLIEARDFEELSDIRSNARDSAIEGVMLKRRDSPY
                     VPGRKAGFWYKWKRAPLTADCVLMYAQRGSGKRSSFYSDYTFGCWADDGQLLPVGKAY
                     FGFTDEELKWLDRWVRNHTVERFGPVREVDKALVLEVAFDSIHSSSRHKSGLAMRFPR
                     ISRIRTDKPAAEADRVATLESMVT"
     gene            complement(7749..>8407)
                     /locus_tag="VHN55_02090"
     CDS             complement(7749..>8407)
                     /locus_tag="VHN55_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX2802765.1"
                     /translation="YSDRGGFEERGGFGGNRGYGDRGGFGGGDRPGGGFGGAAGGGFR
                     GGGGMPPQVVGEAKGLVKFFNPQKGFGFIVRDDGGEDVFVHISAVEQAGLTDLADGQP
                     LEFTLVDRGGRVSATNLRIEGEPMPVERGGGGDRGERGGPQRQLTGEKAEGTVKFFNA
                     MKGFGFIQRDDGQPDAFVHISAVERAGLPTLNEGDRLAFELEVDRRGKHAAVNLQPIG
                     "
BASE COUNT         1434 a         2858 c         2672 g         1443 t
ORIGIN      
        1 cgtcagccca ggagggctgc cacggcgatc ccggttgcga gcagcaagag tgccactgcg
       61 atcagtatcg gccggtgagc cgggctcgcg tgaaaggcca tgaacatcgt cgtcctccta
      121 cttctttgcc ggccgtcccc gtttgcgcgg ttccggcgcc tttaacttca ctccccgggc
      181 ggtcagtgcc tctcgaagga gcacttcgac ctcggcgttc gcgctcctca ggtcggcggc
      241 ggcgcagcgc tcgaccgccg accacagagc cgggtcgacc cgaagcggga atgccttgcg
      301 atcgcctgaa tccgccacgc cgctatcgtt actggtatag cgttccggtg ttgacgaccg
      361 gctgtgtctc gcggtcggag cacagcacga ccatcaggtt cgaaaccatt gccgcgcgcc
      421 gttcgtcgtc gagttcgacg acctccttct cggacaattg ctgcagtgcc gtctcgacca
      481 tcgaaacggc gccctgaacg agcttggcgc gagccgcgat gatcgcctcc gcctgctgcc
      541 ggcgaagcat cgcctgggcg atctcctggg cgtaagcgag atgcatgatc cggcattcgt
      601 cgatgctgat cccggccttg gcgactcgct cctgaagctc ggactccagg tccgcattca
      661 ccacctcggc gctgcttcgc agggtgactt cctgatgctc gatgtcgtca tacgggtact
      721 tcgagccgat cgtccgcacc gcgctttcga tctggacctt gatgaaatcg gagtaatcgg
      781 cgacgtcgaa catggcctgg gcggtatcgc tcacccgcca cacgacattg gcggcgatct
      841 cgatcggatt cccgcgaagg tcgttgacct tgatccggtc cgacgtgaaa ttgtgaatcc
      901 ggatcgagat cttggggcgg agcatccacg gccacaccca gcgcagcccg gtcgaacggt
      961 cgcttccgcg ataatcgcca aacaaggtga tcaccgccgc ctggttcggc tggagcatgt
     1021 acagcccggc gactgcgagg gtgaagacca gcactccggc cccgataagg acgaagctga
     1081 gaatctcgcc ctcgccgttc gccagccgaa cgaccccgta cgcgtccatt gcgattccga
     1141 gcagcgcgac cagcagcatc ggataaccgc tcagggtcga tgccgcccgt tcgctgctgt
     1201 gtcgaagcgc aattgcctcc tgtgccgaca tgagtgcctc ccttaatctg atatcacatt
     1261 aatatcgttg tgtgagttgg cgagtcaatc gaaatcgtgc acggcccttc ccttcgccgc
     1321 cgcgcctgtc caaaggagcg caatgcgcaa gactgactgg aagctcgtga tccacggcgg
     1381 cgcgggcatt atcaaaaggt cggggacgac gccggagaag gacggcgaaa tccgtgccgc
     1441 cctcgaccac gcgctggcga cgggctccgc cgtcctcgcc gacggcggaa gcgcggtcga
     1501 cgcggtcgaa gctaccgtcc gcgagctcga ggacgacccc catttcaacg ccggtcgcgg
     1561 cgccgtcttc acctatgacg gacgcaacga gctcgacgct gcgatcatgg acggccgcga
     1621 ccgttccgcc ggcgcggtaa ccggggtcat ggagacccgt catcccgtca gcctcgcccg
     1681 ggccgtgaag gagcattcgc cgcatgtcct ccttcgcgga cgaggcgccg atcaattctc
     1741 ccgcgaccag gggctggagc aggtcgaaaa cagctggttc gcgaccgccg agcggcgccg
     1801 ccagctcgac gagatgatcg ccgccaaagg cgaccatttc gatgccgagc tgaaatacgg
     1861 cacggtcgga gcggtcgcgc tcgacagcga tggccatgtc gccgcggcga cctcgaccgg
     1921 cggcctcacc ggcaagcgct ggggccggat cggcgactcg ccgctgatcg gcgccggcac
     1981 ctatgcagac gaccgctcgg ccgctgtgtc ggcgaccggc gccggagaat atttcatccg
     2041 cgcgctcgca gcctaccagg ccgcggagct ggtgaagaac ggaggccagt cgctccagga
     2101 ggcgctccag cacacgcttg cggacatcca gtccctcggc ggaacaggcg gcctgatcgc
     2161 agtgagcgcg atcggcggga ccgcctgggg cttcaccacg ccgggaatgt atcgcggatg
     2221 cgccgattcg aacggccgca aggtcgcgct ctactccgaa gatgaggaac ggtagggcag
     2281 ctctcgtcgg agccactcga cttcccctgc caccgcaacg cgctcctggg cgagaaaatc
     2341 ggcaaccgcg ctccggaagc cgggatcgac gatgaaatgc gccgaacgag tcaccaccgg
     2401 ctcgtacccg cgcgaaagct tgtgctcgcc ctgcgcaccc gcctgaaccg acttcaaccc
     2461 gcgcccgatg gcccagtcga tcgcctggta atagctcagc tcgaaatgca ggaagcggat
     2521 ctcgtcgacc gtgccccagt agcggccgta gagtgcgtcc gggccgatga cgttgagcgc
     2581 ccccgcaatc gggcgtccgc cgcggcaggc caggaacagc aggagcttgt cgcccatgct
     2641 cgccccgatc cggtcgaaga aatcgcgagt caggtacggc cgcccccatt tgcggctgcc
     2701 ggtgtcctgg tagaagcgcc acatccagtc ccattcgtcc gccccgatgt cggagccggt
     2761 cagggcgcgg aactccagtc cctcgcgcgc cgccgcccgc tccttgcgga tcgtcttgcg
     2821 cctgcggctc gtcagcgagt cgaggaaatc gtcgaaatca cgatagccac ggttgtgcca
     2881 atggtactgg attccgtcgc ggatcagcca gccgcgccgc tcggcttcgg ccgcgtcggc
     2941 gccttcgatg aaggtcgcat gcgccgacga cagtccgttc tggaccgtta ccgcctcaac
     3001 cgcggcgagc agctgctgcg gacgcgaccc gagaagcctc ggtccagaca ccggagtgaa
     3061 cggcaccgcc acctgcagct tgggataata ggcccggccg gcccgctccc acgcgtccgc
     3121 ccagccgtgg tcgaacacat attcgccctg gctgtgcgtc ttcagataag cgggcgcggc
     3181 tgcttcgagc ctgccgtcct cctccacgag aatcggtgcg ggggtccagc cggttccggg
     3241 gccgacactg gccgaatctt caagcgcgcg caggaaggca tggctgacga acggatggtc
     3301 gccggcgacc cggtcccaat ctgccgcgtc cagcgcgctt attcccggag cgatccgggc
     3361 gaggacttcc gattcgcggt cggccattcc tcgccgctat agcagcgcgt ctgaactagg
     3421 gcttcacagc gacgatcgcg tcgatctcga ccgcaactcc gagaggcagc acaggaacgc
     3481 cgacggcgct tcgtgcgtgc cggccggctt cgccgaacac ttcctgcatc agctcggatg
     3541 cgccgttggc gaccttcggc tggtcggtga acgaggccgc gctgttcacg aacaccccca
     3601 gcttcaccac ccgctccacg cggtcgagcg agccgagcgc ggcctgcatt tgggccagaa
     3661 gcatgatccc gcagcgccgc gcggccgccg tcgctctctc cagattgagg tcctcgccaa
     3721 cgcgaccggt aatgagattg ccgtcctcgg acacgctgat ctgtccggaa atgtgcaaca
     3781 agccgccgat ttcgacggcc ggcacgtaag acgcgaccgg ggccgcaggt tccggaaggg
     3841 tgatgccgag ctcggcaagg cggtcatcga tgctcattcg gcgctcctga tcgtttggac
     3901 ttggcgaatc aagttttgcg cgcgactgcg aagccggcga agctctggct ggtcggcatc
     3961 agctcgatcg cgttgacgtt cacatgcggc ggaagagtgg ccacccacca gatcgtttcg
     4021 gcaatgtctt gggccgtcat cgggtccatg tccgcgtaga gcgcatcgga cgcggccttg
     4081 tcgccgccgg tgcggacgat cgtgaactcg gtctcgacca tccccggctc gatcgaggtg
     4141 acccgaaccc ccgtgccggc aaggtcgcat cgaaggtcga gcgagaattg ccgcacgaag
     4201 gccttggtac ccgcgtaaac ggcgcccccc ttgtagggat aagtggcggc gaccgacgac
     4261 aggttgatga tcgcgccttt gcggccgatg aggccgggga gcagcgcgcg ggtaagcgcc
     4321 accagcccgt tcacgttggt gccgatgacc gtctcgatca gctcccagtc ggtctcaggc
     4381 aacgggtccg tcggcggcgc caggccggca ttgttcaaca gcaggtcgat ttcgccccag
     4441 ggaggcgaca actcggcgat tgactctacc gcgcttcgct cacgcatatc gatttcgagc
     4501 ggcaggaaag aatcgccaag ctcgtcggca agcgctttca gccggtccgc ccgtcgcccg
     4561 gtcccgacca ccttccagcc accgctcgcg aaacgccggg ctgcggcttt tccgattccg
     4621 gcggtcgctc cggtgatcag gatcgtcttc gtcattacag ctcctcgagg tctcgccgcg
     4681 ccgctaccaa cttttccggc ggcaggtcca ttgcttcggc gacggcaacc aaatcgggct
     4741 catgcgcctc aaggaaccgg atcagcgccg caagcagtgc cgggtcggct gctcgagcgc
     4801 gaagctcacc tgtcccgatt ccggtcaggt caaggaaccg ccgcgcccgc cgttcgtcgg
     4861 aaacggctgt agcaagggca aggagcgcga gagcgtgcgc gtcggttggc gtcgcttcag
     4921 ccatgcccta agctcggttc agcggttgcg gggatagtga attggccaag atcctgatcg
     4981 tcgaggacaa tgcgctgaac gtcaaattgt tctgcgacct cctcgctgcg catggccacg
     5041 agccgcgtcc ggtcaccgac ggccgcttcg cgctcgagca ggctcgcgaa ttcgggcccg
     5101 atctcgtcat caccgacatc cagcttccgc acgtcaccgg cctcgacctc atccgcctca
     5161 tgcgcgagga caaggggctg aaggaggtgc cgatcatggc cgtcaccgct tatgcggcgg
     5221 caaccgacga ggagcgtatc cgggccgcag gggcgcaggc ttatgtgtcg aagcccattt
     5281 cggtggcaaa attcgtcgct caggtgaacg agcttctggg gatcgaggat gccgggccga
     5341 tggcacccgc cttcgatcgc gggtcggcgc cgggataagt ggctggcggc taggccgccg
     5401 cggtcaattg atcttggctt ccttgaactc gacgtgcttg cgcgcaacgg gatcgtactt
     5461 gcggaagctc atcttttccg tctggttgcg cggattcttc ttcgtcacgt agaagaagcc
     5521 cgtatccgcg ctgctgacga gcttgatctt gacggttgcc ggcttggcca tcggaagtgt
     5581 cccaaatcaa aagaaaagag cgacacgccc gggtgccgct tcacgcgggg cggcacatgg
     5641 ctttgcgggc tgtttttgtc aagccgagcg cccgcgttga ccacacgtta accccgatgg
     5701 gcgactatcg cttcaacagg agaagacgag gccatggccg gcgagaagct tgagccagtg
     5761 cggaaccaga tcggcgaacg cctcgccgag ttcagcaacc gtgccgagcg cctgtcgccc
     5821 ctcgacatcc acgcgcgaat ggatgcgatc cggcagattg ccgccgacaa cgggctcgac
     5881 gcgctggaaa gcctgatgca ccgctctgcc cagctggcgc ttctcccggg ccaccggatc
     5941 gccacccgct gctgcctgga acatgtcgac gaggcgctcg acagccattc cgcttccgac
     6001 cgcactgcaa tcctcgcggc gctcgcgctt cggctgaact gagccgggaa accgtgcgcg
     6061 ccgggggttc gttacggccc catgcgcgct ttctcgcaac tcctcgacga cctcgcctac
     6121 acgcgctcgc gcaacaccaa gctcaagctg atcggcgatt atctcaagca agcgcccgac
     6181 cccgaccgcg gaatcgcgct cgccgccctg accggctcgc tcagcatacc gaccgtcaag
     6241 ggcgctgccg tccgcgccgt tgccgaggag cgggtggacc ccgtgctcct ctacatgagc
     6301 cgcgactatg tcggcgacat ggccgagacc gtctcgctgc tctggccggg gccggacggc
     6361 gatcccgagc tggacgacgg caccgtctcg atttccgatg ctgtcgagcg gctggcgagc
     6421 gcaggcaagg tcaatgcgcc gcgggtgctc gcggagatgc tcgaccatct cgatgcgtcc
     6481 ggccgctttg cgctgctgaa gctcgccacc ggcaatctgc gaatcggagt ttccgcgagg
     6541 cttgccaagc aggccttggc gaatgcgttc ggactagaag tcgatgcggt cgaggaagtg
     6601 tggcacggac tggccccgcc ctatcccgag ctgttcgcct gggcagaggg gcacagaccg
     6661 cagccgacgc cgcgcgacgt gccggtgttc cgccccttca tgcttgccca cccgctcgag
     6721 gagacggtcg tctcgctcga cgattatgcg gcggaatgga agtgggacgg aattcgcatt
     6781 cagctcgtcc ggaccgccgg ccagacccgc ctgtacagcc gcacaggcga cgatgtttcg
     6841 ggcagctttc cagagattgc cgaggcgttc gagagcgacg gagtcctcga cggcgagctt
     6901 ctcgtccgcg ggtccggcca gggcagcgcc gacgttcatg gcggcgccgc ggcctcgttc
     6961 aatgccctcc agcaaaggct cggccgaaag acggtgagcg cgaggatgcg tgagcaatat
     7021 cccgccttcg tccgcctcta cgatatcctc ttcgaaggag aggaagacct tcgcggcctg
     7081 ccctggaccg accgtcgcag gcggcttgag gccttcgtcc cgaaactcga taccgaccgc
     7141 ttcgacctgt cgggcctgat cgaggcgcgg gatttcgagg agctttcgga catccgctcc
     7201 aatgcccgcg actcagcgat cgaaggcgtg atgctcaagc gtcgcgacag cccctatgtg
     7261 ccggggcgca aagcgggctt ctggtacaag tggaagcgcg ccccgctcac cgccgactgc
     7321 gtcctgatgt acgcgcagcg cgggtcgggg aagcgctcga gcttctattc cgactatacc
     7381 ttcggctgct gggccgatga tggacagctg cttcccgtcg gcaaggccta tttcggcttc
     7441 accgacgaag agctgaaatg gctcgaccgc tgggtgcgca accacaccgt cgagcggttc
     7501 ggcccggttc gcgaggtgga caaggcgctt gtgctggagg tcgcgttcga ttcgatccac
     7561 tcgagcagcc gccacaagtc gggcctggcg atgcgttttc cgcggatcag ccggatccgc
     7621 accgacaagc cggcggccga ggccgaccgc gttgcgaccc tggagtcgat ggttacttga
     7681 aaacaagaaa acgcccgccc ggtgttggcc ggacgggcgc ttcttaccta tcggtgcggt
     7741 gggtgggatc aaccgatagg ctggagattc acagcggcat gcttgccgcg cctgtcgact
     7801 tcgagctcga acgctagccg gtcgccctcg ttgagggtcg gcagcccggc gcgctctacg
     7861 gccgagatgt ggacgaatgc gtcgggctgg ccatcatcgc gctggatgaa gccgaaccct
     7921 ttcatcgcgt tgaagaactt gacggtgcct tccgccttct cgccggtcag ctggcgctgc
     7981 gggccacccc gctcgccgcg gtcgccgccg ccgccgcgct cgaccggcat cggctcgccc
     8041 tcgatccgca ggttcgtcgc cgagactcgc ccgccgcggt cgacgagcgt gaattcgaga
     8101 ggctgcccgt cggcgagatc ggtcaggccc gcctgttcga ctgccgagat gtgaacgaac
     8161 acgtcctctc caccatcatc gcggacgatg aagccgaagc ccttctgcgg attgaagaat
     8221 ttcacgagcc cctttgcctc gccaacgact tgggggggca ttccgccgcc gcctcggaag
     8281 ccgccgccgg cggcaccgcc gaatccgccg cccgggcggt caccgccgcc gaatccgcca
     8341 cggtcgccgt aaccgcgatt cccgccaaat ccgccgcgct cctcgaagcc accgcggtcg
     8401 ctgtaac
//
LOCUS       DATAKH010000056         8294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_24836,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000056 DATAKH010000000
VERSION     DATAKH010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8294
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24836"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..824
                     /locus_tag="VHN55_02095"
     CDS             <1..824
                     /locus_tag="VHN55_02095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020819623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008767 - UDP-galactopyranose mutase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HEX2802766.1"
                     /translation="DLQTDEEAAEYLASRAEPVDDIQTSEDVVINAVGRELYELFFQG
                     YTRKQWGLDPSELDKQVTSRIPTRTNTDDRYFTDKFQAMPLNGYTAMFEAMLDHPLID
                     KSLGTDFRDLRDRARELADHIVYTGPIDEYFDFRFGKLPYRSLKFDHQTLDEEWHQEV
                     AVVNYPSPDVPYTRVSEYKHLTGQQHPRTSITYEYPAAEGDPYYPIPRPENQELFKRY
                     EALADDTDGVTFVGRLATYRYYNMDQIVGQALATFRRLDDKRLERKQERSSVVAE"
     gene            896..1930
                     /locus_tag="VHN55_02100"
     CDS             896..1930
                     /locus_tag="VHN55_02100"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HEX2802767.1"
                     /translation="MPRSLDSDGCRPAGAAPESAAATYVNPILDSDFPDPAVILAADG
                     FYYAYATQTVRDGRWVNIQAARSADLIHWDYLGDALPEKPEWAQKTQDFWAPSVICDG
                     STYFMYYSATPDFCRDHAHGHALAVATANNPAGPYVDIGMPLLLGAGFEYIDPMAFDD
                     PATGKHYLYWGSGFQPIKVQELAPDRVSFAPDSEMIDLVRPNGKDGGFPRLVEASWVI
                     FNDGYYYLFYSGDNCCGPDARYGVMVARSRSATGPFESLEEAKGVPDSIVLDKNGRWI
                     APGHNCIATDKEGRHWMLYHAIDVNNPRQSQDHEINSRRVLLIDPVEWRDGWPHVGTP
                     SHEPRNAPAV"
     gene            complement(1942..3114)
                     /locus_tag="VHN55_02105"
     CDS             complement(1942..3114)
                     /locus_tag="VHN55_02105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802768.1"
                     /translation="MQPSVQTRFASFFQAGFECSSHRRRDGVRLDLIRATGHDRHVLD
                     DYRRCREFGLLTVRDGLRWHLIEKSPGKYDWSSWMPALEAAEEAGLQVIWDLFHYGSP
                     DHIDQADSGFPQRFTDFALAALEVRESVTGRPPLVCPLNEINFLSWAVDDGYVPRVGP
                     EERGWFKRQLVATAISASRAIRERWPEATIIGAEPLIHVAPHDRRPATVSAALQNLEG
                     MYQAYDWILGLAEPQMGGDRSLIDVIGLNFYPHNQWYFEGPTIPMGHHEYRPLADMLA
                     EMAERYRKPVMLSETGAEGSGRPAWLHYVCDEVRDALSRGVPIEGVCLYPITAYPGWD
                     NSRHCDVGLFSSIVANGERHVYQPLAEELHRQKALFGIRQDDGKRGRLRVAGSERN"
     gene            3226..3996
                     /locus_tag="VHN55_02110"
     CDS             3226..3996
                     /locus_tag="VHN55_02110"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX2802769.1"
                     /translation="MKPRQHWPARLWLVRHGQSQGNVARDLAHEAGHHEIGIDVRDVD
                     VPLSALGHEQARAAGEWFASLPEDERPEVILTSPYIRTKQTAQAICEAGALAGGRRSP
                     IIDERLREREFGIFDRLTTAGIKARFPEEAEHRAMLGKFYHRPPGGESWADVILRLRS
                     ALNTINLHYSDRRVLVVCHQVVVLCFRYILDGLDEAQILRIDKQSEILNCGICAYDFD
                     PDEQGQCVPKLSFWNVAASAEDSGAAKTAEPDAMTGTR"
     gene            4050..4859
                     /locus_tag="VHN55_02115"
     CDS             4050..4859
                     /locus_tag="VHN55_02115"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEX2802770.1"
                     /translation="MAEGDKHDHGRLLIVAGSRSLPGSALLCALAAMRAGAGKLQIAT
                     VESVAVQIGVAMPESRTIGMPESKDGSFAQAAVAKIAKVADDVDAVVAGPGMFATSAG
                     EGIAAALLRTDRALALDAGVLRSMPNSGIARTAGNLPVLLPHSGELAALLGCSETAVE
                     ADPLGCGKICAQRYGAVTLVKGTVSHIVHPDGRTWTYRGGAPGLGVSGSGDTLAGIVG
                     ALLARGAEPLAALLWSVLLHGEAGEELSSKVGPVGFLAREIPDEIPALLAR"
     gene            complement(4856..6322)
                     /gene="pyk"
                     /locus_tag="VHN55_02120"
     CDS             complement(4856..6322)
                     /gene="pyk"
                     /locus_tag="VHN55_02120"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEX2802771.1"
                     /translation="MAETLKPRSRKVKILATLGPASSSARMIRALMFAGADAFRINMS
                     HGTHAQKAKLVEAIRALEKELRRQTTILFDLQGPKLRVGHFDGGSAELASGDRFILDG
                     DRKAGDSTRVELPHPELFEAIGKGDRVLIDDGRIRLEVIEAGDSQIVTQVQVGGTISD
                     HKGVNVPDVVVPIPALTDKDRKDLKFALEQRADWIALSFVQRPEDVAEARVLIGEKAA
                     LMAKIEKPKAIDRLNDIIALSDGVMVARGDLGVELPPEDVPPLQNKIVACARQFGKPV
                     VVATQMLESMIVSPSPTRAEVSDVATAIYDGADAVMLSAESATGEFPCEAVQMMDRIA
                     TSVEGDPVYPARIHFTETKLEPTTADALAGSARHIANTVSAQAMVCYTSSGSTARRIA
                     RERPPVPVLAMSASLVTVRRLGLIWGVHAVHTRDVASFEEMVAKAKRMALRHHLAEGG
                     NRLVLMAGVPFGTPGSTNVIHVVRLVGDELERHEAAKA"
     gene            6445..6687
                     /locus_tag="VHN55_02125"
     CDS             6445..6687
                     /locus_tag="VHN55_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017670405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2312 domain-containing protein"
                     /protein_id="HEX2802772.1"
                     /translation="MADGTVAADQLRLFIERIERLEEEKKGIADDIRDVYAEAKANGY
                     DPKIMRMVVRLRKMETHTRQEQDAILDTYRSALGLG"
     gene            6697..7440
                     /locus_tag="VHN55_02130"
     CDS             6697..7440
                     /locus_tag="VHN55_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX2802773.1"
                     /translation="MAGHSKFKNIMYRKGAQDKKRSAMFSKLSREITVAAKMGLPDPE
                     ANARLRAAVLAAKAQSMPKDNIQRAIDKASGGDTENYEELRYEGFGPAGVALIVEALT
                     DNRNRTATNIRTIFSKNGGNLGASGSVSHGFERLGLIEYAASAGDSDKVLEAAIEAGA
                     EDVESDDSGHRIWTSVDDLHTVAKSLEDMLGEAETTKLAWRPQTEVEVRGSDAEQLMK
                     LMEALDDDDDVQTVWGNENIPDEELEKLG"
     gene            7437..7925
                     /gene="ruvC"
                     /locus_tag="VHN55_02135"
     CDS             7437..7925
                     /gene="ruvC"
                     /locus_tag="VHN55_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010546095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEX2802774.1"
                     /translation="MIILGLDPGLGTTGWGLIRADGNRLSHIANGQLKTKTAMPLAER
                     LADLAAQLEALLAEHRPDAAAVEEVFVNKNPQSTLKLGQARGVVLMIAARSGMIVGEY
                     AARLVKKAVVGTGSAEKPQVHAMVARLLPGAQIAGPDAADALAIAITHAHHLASRRSG
                     VV"
     gene            7980..>8294
                     /locus_tag="VHN55_02140"
     CDS             7980..>8294
                     /locus_tag="VHN55_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802775.1"
                     /translation="MRLKIIAMAATALVSAIAAATPPLPMPPIPMNASWLLAQPEPAM
                     TSTGDPKVDEYRRKLIEEGDPVWRPIFRRLLADVRADPSIIQRYDAMRAIDTPTEYLR
                     FYL"
BASE COUNT         1521 a         2743 c         2617 g         1413 t
ORIGIN      
        1 tcgacctcca gactgacgag gaggcggccg agtatctcgc ctcgcgggca gagcccgtgg
       61 acgacatcca gacatccgaa gacgtcgtca tcaatgccgt cgggcgcgag ctctacgagc
      121 tcttcttcca aggctatact cggaagcagt gggggctcga cccgtccgag ctcgacaagc
      181 aggtgacgag ccgaatcccg acccggacca acaccgatga ccgctatttc accgacaagt
      241 tccaggcgat gccgctcaac ggatatacgg cgatgttcga ggcgatgctc gaccatccgc
      301 tgatcgacaa atcgctgggc accgacttcc gagaccttcg cgacagggct cgagagctcg
      361 cggaccacat cgtctatacg gggccgatcg acgaatattt cgacttccgt ttcggcaagc
      421 ttccctaccg gagcctgaag ttcgaccacc agacgctcga cgaggaatgg catcaggaag
      481 tcgcggtggt gaactatccc tcgcccgatg tgccctacac tcgggtcagc gagtacaagc
      541 acctcaccgg ccagcagcac ccgcggacat cgatcaccta cgaatatccg gcggccgaag
      601 gcgatcctta ctatccgatc ccgaggcccg agaaccagga gctgttcaag cgctatgaag
      661 cgctcgccga cgatacggac ggagtcacgt ttgtcggccg cctcgccacc tatcgctact
      721 acaacatgga ccagatcgtc ggtcaggcgc tggcgacctt ccgccgcctg gacgacaagc
      781 gactggagcg gaagcaggag cgttcttcgg tcgtggccga gtgacctgcg tcgccgccgc
      841 gaaagggagc gccggcccgg tttgacatgg cttgagccgg caataaggcc gatgaatgcc
      901 cagatcactc gactctgacg gttgccgacc cgccggcgct gcccccgaat ccgcggcggc
      961 cacctacgtc aacccgatcc tcgattctga ctttcccgac ccggcggtga tcctcgcggc
     1021 agacggtttc tattatgcct acgcaacgca gacggttcgc gacggccgct gggtcaacat
     1081 ccaggctgcc cgttcggccg atctcatcca ttgggactat ctcggcgacg cgcttcccga
     1141 aaagcccgaa tgggcacaga agacccagga cttctgggcg ccgagcgtga tctgcgacgg
     1201 gtcgacctat ttcatgtatt attcggcgac ccccgatttc tgccgcgatc atgcgcatgg
     1261 ccatgcgctt gccgtcgcca ccgcgaacaa tccggcggga ccctatgtgg acatcgggat
     1321 gccgctgctt ttgggtgccg ggttcgaata tatcgacccg atggcgttcg acgacccggc
     1381 aacgggcaag cattatctct actggggctc gggtttccaa cccatcaagg tgcaggagct
     1441 cgcgcccgac agggtctcat tcgcgccgga cagcgaaatg atcgaccttg tcaggccgaa
     1501 cggaaaggac ggcggattcc cgcggctggt cgaagcctcg tgggtcatct tcaacgacgg
     1561 ctattattat ctcttctatt ccggcgacaa ttgctgcggg cccgacgcgc gctacggggt
     1621 gatggtcgcg cggtcgagaa gcgctaccgg tccgttcgaa agcctcgagg aggccaaagg
     1681 cgtccccgac agcattgtcc tcgacaagaa tggccgctgg atcgcgcctg gccacaattg
     1741 catcgccacc gacaaggagg gccggcactg gatgctgtac cacgccattg acgtgaacaa
     1801 tccgcgccag tcgcaggacc atgaaatcaa cagccggcga gtcctgctga tcgaccccgt
     1861 cgaatggcga gacggttggc cgcatgtcgg aaccccctcg cacgaaccga ggaacgcgcc
     1921 ggccgtatag gctggcttcg cttaattccg ttcgcttcca gctacccgca aacgcccccg
     1981 cttgccgtcg tcctgccgga tcccgaacag cgccttttgc cgatgcagtt cctcggcgag
     2041 gggttggtaa acatggcgct cgccgttcgc gacgatgctc gaaaacaggc cgacgtcgca
     2101 atgccggctg ttgtcccacc cggggtaggc ggtgatcggg tagaggcaga cgccttcgat
     2161 cgggactccg cggcttagcg catcgcggac ctcgtcgcag acatagtgaa gccaggccgg
     2221 gcggccggag ccttccgccc ccgtttcgct tagcatcacc ggctttcgat agcgctccgc
     2281 catttcggcg agcatgtcgg cgagcggccg gtattcatga tgacccatcg ggatcgtcgg
     2341 gccttcgaaa taccattggt tgtgcgggta gaagttgagg ccgatcacgt cgatcagcga
     2401 gcgatcgccg cccatctgcg gttcggccag ccctaagatc cagtcatagg cctgatacat
     2461 gccttcgagg ttctggaggg cagcgctaac cgtcgctggc cggcggtcgt gcggtgcgac
     2521 atggatcagc ggctcggcac cgatgatcgt ggcctccggc catcgctccc tgatcgcccg
     2581 cgacgcgctg atcgcggtgg cgacgagctg gcgcttgaac cagccgcgct cctccggccc
     2641 gacgcgcggg acatagccgt cgtcgaccgc ccacgacagg aagttgatct cattgagcgg
     2701 acaaacgagc ggcggccgcc cggtcaccga ctcccgcacc tcgagagcgg ctagggcgaa
     2761 atcggtgaac cgctggggaa agccggaatc ggcctggtcg atgtgatcgg gcgacccgta
     2821 gtgaaacagg tcccagatga cctgcagtcc ggcctcctcc gccgcctcga gcgccggcat
     2881 ccagctcgac caatcatatt tgcccggcga tttttcgatc aggtgccatc gcaaaccgtc
     2941 gcggaccgtc agcaggccga attctcggca gcgccggtaa tcgtcgagga cgtgccggtc
     3001 atgcccggtg gccctgatga ggtcgagccg aacgccgtcg cggcggcgat gcgacgaaca
     3061 ttcgaagccg gcctggaaaa agctggcgaa tctggtctga acagagggct gcattcgtgt
     3121 caccaacgcg cgaacaaccg cgctgcccct cgcgaagttt caacgtcccc gccgggtgct
     3181 gctgcctgtt tgaacatttt gcctctctcg cgctttcatt gccgcatgaa accgcggcag
     3241 cattggccgg cgcggctgtg gctggtccgt cacggacaga gccagggcaa tgtcgcacgg
     3301 gacctcgccc atgaggccgg gcatcatgag atcgggatcg acgtccggga cgtcgacgtg
     3361 cccctgtccg cgctcggaca cgaacaggca agggcggcag gcgagtggtt cgcgtcgctt
     3421 cccgaagacg aaaggccgga ggtgatcctg acctcgccgt acattcgaac gaagcagacc
     3481 gcccaggcga tctgtgaggc cggcgctctg gcaggagggc gcagaagccc cattatcgac
     3541 gagcggcttc gcgaacgtga gttcggcatt ttcgaccggc tcacgaccgc cgggatcaaa
     3601 gcgcgtttcc cggaagaggc ggagcatcgc gcgatgctcg gcaaattcta tcaccgtccg
     3661 ccgggcggcg agagctgggc ggatgtcatt cttcggctcc gctctgcgtt gaacacgatc
     3721 aaccttcact attccgaccg gcgggtcttg gtcgtctgcc accaggttgt ggtgctctgc
     3781 ttccgctaca tcctcgacgg cctggacgag gcccaaatcc tccggatcga caaacaatcg
     3841 gaaatcctca actgcggcat ctgcgcttat gacttcgatc cagacgaaca agggcaatgc
     3901 gtcccgaagc tgtcgttctg gaacgttgcc gcctcggccg aagattcagg cgctgcaaag
     3961 acggccgaac cggacgcgat gactgggacc cggtgagcgg cggaacaagg cttaacaggc
     4021 gagagctcgc gcgctttccc ctgccggagg tggccgaggg ggacaagcac gatcatggcc
     4081 gcctactcat cgtcgcgggc agccggagcc tgcctgggtc cgcgctcctg tgcgcgcttg
     4141 cggcgatgcg ggccggcgcc gggaagctgc agattgcaac ggtcgagagc gtcgcggttc
     4201 agatcggcgt tgcaatgccc gaatcgcgca cgatcggcat gcctgagtcc aaggacggaa
     4261 gcttcgccca ggcggccgtt gcgaagatcg cgaaggtcgc ggacgacgtc gacgcggtcg
     4321 ttgccggtcc ggggatgttt gcgacctcag cgggcgaagg catcgctgcc gcgctgctca
     4381 ggaccgaccg cgcactcgcg ctcgacgcgg gagtgcttcg ctcgatgccg aattccggga
     4441 tagcgagaac agctggaaat cttccggtcc tgcttcctca cagcggggaa ttggccgcgc
     4501 tgctcggttg cagcgagact gcggtcgagg ccgacccgct cggctgcggc aagatctgcg
     4561 cccaacgtta cggcgcggtc acactggtca aaggcacggt ctcgcacatc gtgcaccccg
     4621 acggacgaac ctggacctac cgcggcggcg caccgggcct cggcgtgtcc ggaagcggcg
     4681 acacactcgc cgggatcgtc ggtgctctgc tcgcccgagg cgccgaaccg cttgccgctt
     4741 tattgtggtc ggtcctgctg cacggtgaag ccggcgagga gctgtcctcg aaggtgggac
     4801 ccgtcggatt cctcgcccga gagattccgg acgagatacc tgcgcttctg gcccgttaag
     4861 cctttgccgc ctcgtggcgc tcgagctcgt cgccgaccag ccgcacgacg tggatgacgt
     4921 tggtcgagcc cggagtcccg aacggcacgc cggccatcag aaccagcctg ttcccgccct
     4981 cggccaggtg atggcggagc gccatcctct tggccttggc gaccatttct tcgaagcttg
     5041 cgacgtcgcg cgtgtggacc gcgtgaacgc cccagatcag cccgagccgc ctcaccgtca
     5101 ccagcgacgc gctcatcgcc agcaccggga ccggcggccg ttcgcgggcg atccgccgag
     5161 ccgtcgaacc cgagctggtg tagcagacca tcgcctgcgc cgagacggta ttggcaatgt
     5221 gccgggcgga acccgctagc gcgtctgcgg tcgtcggctc cagtttggtt tcggtgaaat
     5281 ggattcgcgc cggatagacc gggtcgcctt cgacgctggt cgcgatccgg tccatcatct
     5341 gcaccgcttc gcatgggaat tcgcccgtcg cgctttccgc ggacagcatc accgcgtcgg
     5401 caccgtcgta gatggcggtc gcaacgtcgc tcacctcggc tcgggtcggc gagggcgaga
     5461 cgatcatcga ttcgagcatc tgcgtcgcca cgaccaccgg cttgccgaac tgccgcgcgc
     5521 aggcgacgat cttgttctgc agcggaggca cgtcttcggg cggaagctcg acgcccagat
     5581 caccgcgggc gaccatcacc ccgtcggaca gggcgatgat gtcgttgagg cggtcgatcg
     5641 ccttgggctt ctcgattttc gccatcagcg ccgctttctc gccgatcagc acgcgcgcct
     5701 cggcgacgtc ttccgggcgc tggacgaatg acaaggcgat ccagtcggcg cgctgctcga
     5761 gcgcgaactt gagatccttg cggtccttgt cggtcagcgc cgggatcgga acgacgacat
     5821 cggggacgtt gacgcccttg tggtcggaga tcgtaccgcc gacctggact tgggtgacga
     5881 tctgcgagtc ccccgcttcg atgacctcca gccgaattcg gccgtcgtcg atcagcaccc
     5941 ggtcgccctt gccgatcgcc tcgaacagct cgggatgggg aagctcgacc cgtgtggaat
     6001 cgccggcctt tcggtcgccg tcgaggatga agcggtcgcc gctcgccagt tcggccgacc
     6061 cgccatcgaa atgcccgacc cgaagcttgg gcccctggag gtcgaacagg atggtggtct
     6121 gccgtcgaag ctccttctcg agcgcgcgga tcgcctcgac aagcttcgcc ttctgggcgt
     6181 gagtcccgtg gctcatgttg atccggaatg cgtcggcgcc ggcgaacatc agagccctga
     6241 tcatccgggc gctgctcgac gccggcccaa gcgtcgccag gatcttcacc tttcgcgatc
     6301 gcggcttcag ggtctcggcc atcggctcct ttccacgagt tccggcagcc gcaatagcgg
     6361 ctcgatatcg ccgttcaacc ggcttgagcg gccgagctcg ctcgcttaga cgcagcggcg
     6421 aatctgaaac gagcggagag tgaaatggcg gacggcaccg tcgcggccga ccagctgcgg
     6481 ttgttcatcg agcgaatcga gcggctcgag gaggagaaga agggaatcgc ggacgacatt
     6541 cgcgacgtct atgccgaggc gaaggccaac ggctacgacc ccaagatcat gcggatggtg
     6601 gtgcgccttc ggaagatgga aacacatacc cggcaggaac aggacgcgat cctcgacacc
     6661 tatcgctccg ccctcgggct gggttaagga acggcaatgg cgggccattc caaattcaag
     6721 aacatcatgt accgcaaggg cgctcaggat aagaagcgct cggcgatgtt ctccaagctg
     6781 tcgcgcgaaa tcaccgttgc cgcgaaaatg ggcctgcccg atccggaagc caatgcccgg
     6841 ctccgcgccg cggtcctcgc agccaaggcg cagtcgatgc cgaaggacaa tatccagcga
     6901 gcgatcgaca aggcgtcggg cggcgacacc gagaattacg aagagctccg ctacgaaggc
     6961 ttcggccccg ccggcgtcgc gctgatcgtc gaagcgctga ccgacaaccg caaccgcacc
     7021 gcgaccaaca tccgtacgat cttctccaag aacggcggca acctgggcgc ttcgggctcg
     7081 gtcagccacg gcttcgagcg gctcgggctg atcgaatatg cggcgagcgc aggcgattcc
     7141 gacaaggtgc tagaagcggc gatcgaggca ggtgccgaag acgtcgagtc cgacgatagc
     7201 ggccaccgaa tctggaccag cgtcgacgac ctccacaccg ttgccaagtc tctcgaggac
     7261 atgctcggcg aggccgaaac caccaagctc gcctggcgcc cgcaaaccga ggtcgaggtc
     7321 cgcggctccg acgccgagca gctgatgaag ctgatggaag cgctcgacga cgacgacgac
     7381 gtccagaccg tctggggcaa cgagaacatc cccgacgagg agctggagaa gctcggctga
     7441 ttattttggg attagatccc ggcctcggaa ccaccggttg ggggctgatc cgcgccgacg
     7501 gcaaccgcct ctcccacatc gccaacggcc agctcaagac gaagacggct atgccgcttg
     7561 ccgaacgact tgccgatctc gccgcccagc tcgaggcgct gcttgccgag caccggcccg
     7621 atgccgctgc ggtcgaggaa gtgttcgtca acaagaaccc gcaatcgacg ctcaagctcg
     7681 gccaggcgcg cggtgtcgtc ctgatgatcg ccgcccgctc gggcatgatc gtaggcgaat
     7741 atgctgcgcg gctggtgaag aaggctgtcg tgggcaccgg cagtgccgaa aagccgcagg
     7801 tccacgcgat ggtcgcccga ctgctgcccg gggcgcaaat cgccggccca gacgccgccg
     7861 acgcgctcgc cattgcgatc acccacgccc accatctcgc aagccggcgt tcaggcgtag
     7921 tttaggcccg gctcagcatt agccacgaac ggccatgtgc tgccgggagt gcgtcgaaca
     7981 tgcgtctgaa gattatcgcc atggccgcca cggcgcttgt ctccgccatc gcggcagcca
     8041 ccccgccact tccgatgccg ccgatcccca tgaacgcctc gtggctcctc gcgcagccgg
     8101 agccggcgat gacctcgacc ggcgatccga aagtcgacga atatcgccgc aagctgatcg
     8161 aagagggcga cccggtctgg cggccgatct tccgccgtct tcttgccgat gtccgcgccg
     8221 atccatcgat catccagcgc tacgacgcga tgcgcgcgat cgacacgccg accgaatatc
     8281 ttcgcttcta cctc
//
LOCUS       DATAKH010000057         1774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_24865,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000057 DATAKH010000000
VERSION     DATAKH010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24865"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1081)
                     /locus_tag="VHN55_02145"
     CDS             complement(<1..1081)
                     /locus_tag="VHN55_02145"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX2802776.1"
                     /translation="MEKLFALIAALHEGVVDDDHWLAALDRLSDDFGGSAIFLGTTQR
                     SGGTFELSGHRVDPQWIELVNGELAGDEANPVFATVRNSFRENPIGMAMQPMIMSRLL
                     DPDLYHSSPIYVRAIAPAGHEHVMAMVLSADPTSAISLTLARPAAAGDFTDREAELAR
                     AVGPHILGALKLRHQFALARSSALMLDRFDHGVLLLAASGHVVHANSEAQQILSGRNG
                     LSVDHGELRAAYPADTRRLRHMLSEADRAARGASLQPRQTLRLPRPDGRTDLVVRVLP
                     VAPVVASSFGAGELATIALFIHDPDKGSQPVDEMIAEGLGLSRAEAAVAARIWEGDSI
                     SEVAARLGISQNTVKTHLKAVFEKAG"
     gene            1237..1647
                     /locus_tag="VHN55_02150"
     CDS             1237..1647
                     /locus_tag="VHN55_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802777.1"
                     /translation="MAAPAAARPYDAAFQTSADRSMSQPFMFTGATVRLSLDGRKATR
                     PQLAMRFAGGTASAGVAPRIGEGIAFSTVAGAKPRLTIAGQDAKILGKTSNMSDGGKA
                     ALIVGGVLLAVGALVVVSANEAVDNINDDGGLDW"
BASE COUNT          292 a          583 c          584 g          315 t
ORIGIN      
        1 ccccggcttt ttcgaagacc gccttgaggt gtgtcttcac cgtgttttga gagataccga
       61 ggcgggccgc gacctcgctt atgctgtccc cttcccagat gcgcgctgca accgccgctt
      121 cagcacggct aagcccaagg ccctcggcga tcatctcatc gaccggctga ctccccttgt
      181 caggatcgtg gatgaacaag gcgatcgtcg ccagctcgcc agcaccgaag cttgaagcga
      241 ccaccggcgc cacggggagc actcggacca ccaggtcggt cctcccgtcg ggccggggca
      301 gccgcagcgt ctgcctcggc tgcaggctgg ctccgcgtgc ggcgcggtcg gcttcgctga
      361 gcatgtgccg aagccggcgc gtgtccgccg gataggctgc gcgcaattcg ccgtggtcga
      421 cgctcagccc gttgcggccc gacaggattt gctgggcctc gctgttggcg tggacgacgt
      481 ggccggacgc agcgagcaac aggactccat ggtcgaagcg gtcgagcatc agcgcgctgc
      541 tgcgcgccag cgcgaactgg tgcctgagct tgagtgcgcc gaggatgtgc ggcccgaccg
      601 cgcgcgcgag ctcggcttcg cggtcggtga aatcgcccgc cgccgccggc cgcgccagcg
      661 tcaggctgat cgcgctcgtc ggatccgcgg acaggaccat tgccatcaca tgctcgtgtc
      721 ccgcgggagc gatggcgcgg acatagatcg ggctggaatg gtagaggtcc ggatcgagca
      781 gccggctcat gatcatcggc tgcatcgcca ttccgatcgg gttctcgcgg aagctgttcc
      841 gaaccgtcgc gaataccgga ttggcttcgt cgccggcgag ctcgccgttc accagctcga
      901 tccactgcgg atcgacccga tggccggaca gttcgaacgt cccgccgctc cgctgcgtcg
      961 tacccaggaa aatcgcggag ccgccgaagt cgtcgcttag ccggtcgagc gcggccagcc
     1021 agtgatcgtc gtcgacgacg ccttcgtgaa gcgcggcgat gagggcgaac agcttctcca
     1081 tggcgatggg ctaattccgg ctcggccccg aatgctcacc cgaacgggtg atccgcactg
     1141 acacgtccgg cttcatcatc cactcctcgc aaaaagggga gttagggtca tgagaacaga
     1201 ttcaacggaa tagccagcct gttagcgctg gcctcgatgg cggctcccgc ggccgcccgt
     1261 ccctatgatg ccgcgttcca gacgagcgcc gaccgaagca tgtcgcagcc gttcatgttc
     1321 accggcgcga ccgtgcggct gtcgctggac ggccgaaaag ccacccggcc tcagctggcg
     1381 atgcgttttg ccggcggaac cgccagcgcc ggcgtagcgc cgcgaattgg cgagggcatc
     1441 gctttttcga cggtcgccgg tgccaagcca cggcttacga ttgccggaca ggatgcaaag
     1501 atactcggca agacgtcgaa catgagcgac ggcggcaagg ccgcgctgat cgtcggcggc
     1561 gtattgcttg ccgtcggagc gctggtcgtg gtctccgcga acgaagctgt cgacaatatc
     1621 aacgacgacg gaggactcga ctggtaagcg tcggcgattg ttccgattgg ctgcgcctca
     1681 gtcgtcctcg tcttcatcct catagccgac gaggttgagc tcgcacgcct tgatctggtg
     1741 ggtgaggcac cagtgcttga gagcttcctc tcgg
//
LOCUS       DATAKH010000058         5808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_4280,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000058 DATAKH010000000
VERSION     DATAKH010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5808
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4280"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VHN55_02155"
     CDS             complement(<1..401)
                     /locus_tag="VHN55_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802778.1"
                     /translation="MYRFFAFLAAIALTTLSVTTACFASPAENIRFQLQPAKQPGEVQ
                     LSLFSGTDRHHGNMGSTFRTSDLVGLNLASLQAPGNQPIAFALVREAGRVDCTGAGGA
                     ALATGTCVFAANPAFSDFLVSQGIKRPNRDEA"
     gene            complement(510..2342)
                     /locus_tag="VHN55_02160"
     CDS             complement(510..2342)
                     /locus_tag="VHN55_02160"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEX2802779.1"
                     /translation="MEWFIPFALKSFVIAGGALLLLKLLKDRSAADRSWIAHLALAGL
                     LLLPVATVALPTLDVAGPEFLVGKAETQAPAPVAIDPGTVAKAEISAAPATNEAIAGG
                     EAVNWPFWSYALPAALLVLLTLIALGRLFILKARATVLVDAPWLTALAHAQKRMGFKH
                     GTALLTSNDLPSPISWGVVRPVIILNSEASESHAEAEAIITHELAHVAHLDWAKLLIA
                     RVATALFWFNPFVWLLAREAHQLREEAADDAVLATDIDETEYARLLVGVARHECRGLL
                     IGAHGVAPARNSLSRRVKRVLDRAVKRAPGGWRWGSAAGFFAAGMAVPVAALNLVPAT
                     PTMPETGAYYPATTELSSGNGIADEASQSPDSLQAGIAAGIRTGVATGVSQGLSFAAG
                     KGVVISSHDGTTVLRNPDGGTITIHSKDKKGRSKVVMHGPDGSVMTFADARLVPGLAA
                     VAHPHPTPPTPPTPRTPKSALDTAIEMKALGVTAEYVAAIRAAAPQLRLTNDEVIEFK
                     AVGVTPAYLRELAASGYRNLDADSITEARATGVTGAYIRDLAAAGYPNLTMDQLAEFR
                     AVGVTGDYIRKLRKRGYGGLSVDKLVEMRAVGLDPDDLRGDGGG"
     gene            complement(2342..2722)
                     /locus_tag="VHN55_02165"
     CDS             complement(2342..2722)
                     /locus_tag="VHN55_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003043189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEX2802780.1"
                     /translation="MLSKLPPRERQIVDILYEAGPLTSGDVCDRVPDQISGSAVRAML
                     KRLEDKGFVQRADSDRGYVYSPAVPETAARKSALSEIVRVFFNGSAAGAASALLGMSD
                     KLDSDDLDELEAMIAKARKAKGAQ"
     gene            complement(2827..2916)
                     /locus_tag="VHN55_02170"
     tRNA            complement(2827..2916)
                     /locus_tag="VHN55_02170"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2880..2882),aa:Ser,seq:tga)
     gene            3032..4162
                     /locus_tag="VHN55_02175"
     CDS             3032..4162
                     /locus_tag="VHN55_02175"
                     /inference="COORDINATES: protein motif:HMM:TIGR02283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX2802781.1"
                     /translation="MALRWTIGWTLAGAGALALGPAEAQDSRAMPEPQSPAPEMKAVE
                     VAAVQAYPAPRAITRQVSPFEQYKAYLAGKARSAGVREATIQSVIPSLQLNQRVMELD
                     RAQRPTSSNSDSPPAFGGYLNRHITTSLIRRGQARYSSHWPNLSRIQARYGVDPAVVM
                     AIYGKETSYGSITGSFDLLEALASLAYEGRRRAMFEGEFIAALKLLDVGVQRWQLKGS
                     YAGATGFPQFMPSVVLRLRADGDGDGYADLWRSEDDAFASIANYLRDAGWKRGIPWGV
                     PVRVPATLNRAAIQSRLKPTRCPAVFKRHSRWLTVAEWRSLGVVPTGRGLPDGELATL
                     MDTPGGYAPAYLLTQNYYAILDYNCSNYYALGVGLLANAIAG"
     gene            4257..5432
                     /locus_tag="VHN55_02180"
     CDS             4257..5432
                     /locus_tag="VHN55_02180"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEX2802782.1"
                     /translation="MKRAILFTTAAATLAAGAAPAKAPQFDTPAPIAYLVDLSSGAVL
                     FERNADQRIPPASMAKMMTTEVAFELIDRGQLALNKTCTVRPETWRKWHSQGSTMFLS
                     VNEQVSVENLLHGIVTMSGNDASVVLAECIAGTEQAFVEQMNALAKQLGMSNSHFCNP
                     IGWPDEGCTYVTARDLATLARATVERHPKLYKDFYGQTQFTWGKTLGSGQDITQPNRN
                     PILGKVPGADGLKTGHTDEAGYGFTGSAEQNGRRLVEVLAGMNSWNERVQESTRLMQW
                     GFNAWQAKPLFKQGAEVAKAKVQMGSSSEVPLVAPRDLAVTVPAGLSLTRQMQVKVRY
                     DGPIKAPIKKGQQVAELVVSTGDTTPQVVPLVAGEDVGEAGFFGRAWIGLKSLLGLA"
     gene            5429..>5808
                     /gene="tmk"
                     /locus_tag="VHN55_02185"
     CDS             5429..>5808
                     /gene="tmk"
                     /locus_tag="VHN55_02185"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017665271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX2802783.1"
                     /translation="MTALGRFISLEGGEGVGKSTQLRALAAKLRDRGLTVVETREPGG
                     SEAAESIRRLLLDDHDWPMEAEALLFAAARADHVEKTIGPALERGEWVVSDRFVDSSF
                     AYQGGAGGLGIERLRELHDFACGG"
BASE COUNT         1021 a         1825 c         1963 g          999 t
ORIGIN      
        1 gcttcgtccc ggttcggccg cttgatcccc tgactcacaa ggaaatccga aaacgcaggg
       61 ttagcggcga agacacaagt cccggtcgca agggcggcgc ctcccgcgcc tgtgcagtcg
      121 acgcgccctg cttcccggac aagggcaaag gcgattggtt gatttccggg tgcctggaga
      181 ctcgccaggt tcaggccaac gaggtcgctg gtcctgaacg tcgagcccat attgccgtga
      241 tggcggtcgg ttccggagaa gagcgagagt tgcacttcgc caggttgctt ggccggctgc
      301 agctgaaacc ggatgttttc agcagggctg gcaaaacagg cggtcgtgac gctgagcgta
      361 gtcagggcaa tggccgcgag gaatgcgaag aaccggtaca tgtccattct ccttcgaatt
      421 tgggcaaagt tcgcccgtcc gctcaaagtg agcgcttaaa ttttcgtcag ttggtgaagt
      481 gattcagtcg gtcagcgaga ggttggccgt cagccgcctc cgtcgccgcg aaggtcgtcc
      541 ggatccaggc cgaccgcccg catctcgacg agcttgtcga cggaaagtcc cccgtagccg
      601 cgcttccgca gcttgcggat gtaatcgccg gtgactccga ccgctcggaa ctccgcgagc
      661 tggtccatcg tgaggtttgg ataaccggcg gccgcaaggt cgcggatata ggcgccggtc
      721 acgccggtcg ccctcgcttc ggtaatcgaa tccgcgtcga ggttgcgata gcccgaggca
      781 gcgagctccc gtaggtaggc gggagtcacc cctacagcct tgaactcgat cacctcgtcg
      841 ttcgtcagcc gcagctgggg agcggcagcc cggatcgccg caacatattc ggcggtcact
      901 ccgagagctt tcatttcgat cgccgtgtcg agcgcggatt tcggcgtgcg cggggtcggc
      961 ggggtgggcg gagtgggatg cggatgcgcg acggccgcaa gacctggaac gaggcgggcg
     1021 tcggcgaagg tcattaccga gccgtccggg ccgtgcatca cgaccttgct gcggcccttt
     1081 ttgtccttgg aatggatggt gatcgtgcca ccatcgggat tgcgcaacac ggtcgttccg
     1141 tcgtgcgagc tgatcacaac ccctttcccg gcagcgaagg agaggccctg gctgacgccc
     1201 gttgcgacgc ctgtgcggat ccctgccgcg atgcccgcct gcagcgagtc cggcgattgg
     1261 ctggcttcgt cggcgatgcc attgccgctc gaaagctcgg tagttgctgg gtaataagcg
     1321 ccggtttccg gcatcgtcgg agtagcgggg accaggttca gcgctgcgac gggaacggcc
     1381 attccagcgg cgaagaatcc cgcggccgag ccccaacgcc atccgcccgg ggcacgtttc
     1441 accgctcggt caagcacccg cttcactcgg cgtgacagcg agttgcgggc gggggcgacg
     1501 ccatgggcac cgatcaacag gccgcggcac tcgtggcggg cgaccccgac caggagcctg
     1561 gcatattccg tttcgtcgat gtcggtcgcg agaaccgcgt cgtcagccgc ttcctcgcgc
     1621 agctggtgcg cttcgcgggc gagcagccac acaaacgggt tgaaccagaa gagggcggtg
     1681 gcgacgcgcg cgatcaggag cttggcccag tcgagatgag cgacgtgcgc gagctcgtgg
     1741 gtgatgatcg cttccgcttc ggcgtgcgat tccgacgcct cgctattgag gatgatcacc
     1801 ggccgaacca cgccccagct gatgggggag ggcaggtcat tgctggtgag caaggcggtg
     1861 ccgtgcttga accccatccg cttttgggcg tgagcgaggg ctgtcagcca cggggcgtcg
     1921 acgagcacgg tcgcgcgcgc cttgaggatg aacagccgtc caagcgcgat cagggtaagc
     1981 aggacgagca gagcggctgg aagcgcatag ctccaaaagg gccagttgac cgcttcacct
     2041 ccggcaatcg cttcgttcgt ggcgggtgcc gccgaaattt cggcctttgc gaccgtaccc
     2101 gggtcgatcg cgactggcgc cggcgcctgg gtctcggcct tgccgaccag gaactccggc
     2161 ccggcgacat cgagcgtcgg gagcgcgacg gtggcgacgg gaagcaggag caggccggca
     2221 agggcgagat gggcgatcca gctgcgatcg gccgccgagc ggtccttcag cagcttcagc
     2281 aggagcagtg ccccgccggc tatgacgaac gatttcagcg caaaaggaat gaaccattcc
     2341 atcactgtgc ccctttcgct ttgcgggcct tggcgatcat cgcctcgagc tcgtcgaggt
     2401 cgtcgctgtc gagcttgtcg gacattccaa ggagggcgct ggcggcgccc gcggccgagc
     2461 cgttgaagaa gactcggacg atttcgctga gcgcggactt gcgcgccgcc gtttccggga
     2521 ccgccgggct gtagacgtag ccgcggtccg aatcggcgcg ctgcacgaag cccttgtcct
     2581 cgagccgctt tagcattgcg cgcacagccg agccgctgat ctggtcgggc acccggtcgc
     2641 agacgtcgcc ggaggtcagc ggaccggcct catagaggat gtcgacgatc tggcgttcac
     2701 gcggtggaag cttgctgagc atgagaaatc acaaatcctg tttcgtgcta catttgtagc
     2761 gtgtgctaca tttgtagcgt gaacgcaaga tgaatgtttc gcagacggtc gaattttttc
     2821 gacgaatggc ggagagggtg ggattcgaac ccacggtggg cgtgaaccca cgccggtttt
     2881 caagaccggt gccttaaacc gctcggccac ctctccttaa gcttgggtcc gatatcgctg
     2941 ctcaaggcgg ggcgtgcaag gcgtgcgacc aatgcttgtg gccgggaaca gcaggcgccc
     3001 ctaggctgtt ggaatgagag gggcacggag agtggcgttg cgttggacga tcggctggac
     3061 tttggcgggc gcgggcgcgc tcgcgctcgg ccctgccgaa gcgcaggaca gccgtgcaat
     3121 gcccgagccg cagtcgcccg cacccgagat gaaagcggtc gaggtcgcgg cggttcaggc
     3181 ttatccggca ccacgcgcga tcacccggca ggtcagccct ttcgaacaat ataaggccta
     3241 tctcgccggc aaggcgcgga gcgccggggt gcgcgaggcg acaatccagt cggtaattcc
     3301 ttctctgcag ctcaaccagc gcgtgatgga actcgacagg gcgcagcggc cgacatcgag
     3361 caactccgac tcgccgccgg ccttcggcgg ctatctcaac cgccacatca cgacatcgct
     3421 gatccgccgc ggccaggcgc gctattcatc gcactggccg aacctgtccc ggatccaggc
     3481 gcgctacggc gtcgatccgg cggtggtgat ggcgatctac gggaaggaaa cgagctacgg
     3541 ctcgataacc ggcagtttcg acctgctcga ggctctcgcg agcctcgcct atgagggacg
     3601 gcggcgggcg atgttcgagg gcgaattcat cgccgcgctc aagctgctcg acgtcggagt
     3661 ccagcggtgg cagctcaagg gcagctatgc cggagcaacc ggctttccac agttcatgcc
     3721 ctcggtggtg cttcgcctga gggcggacgg cgacggcgac ggctatgccg acctgtggcg
     3781 aagcgaagac gacgccttcg cctcaatcgc caattacctt cgcgacgcgg gctggaagcg
     3841 cggcatcccg tggggcgttc cggtcagggt gccggcgaca ctcaatcggg cggcgatcca
     3901 gtcgcggctc aagccgaccc gctgcccggc ggtcttcaag cgccacagcc gctggctcac
     3961 cgttgccgaa tggcgctccc tcggggtcgt tccgaccggc cggggccttc ccgacggcga
     4021 gcttgcaacg ctgatggaca cgccgggcgg ctatgcgccc gcctacctgc tgacccagaa
     4081 ttattacgcg atcctcgatt acaattgctc caactactac gccctgggcg tcgggttgct
     4141 cgccaacgca atcgccggct agccgggccc attccgagat accccctcgc gcggtgccgc
     4201 ctcgcgcgat agacagggcc ggtcttccaa ctcccagcag gaaccttgag ccaaagatga
     4261 agcgtgcaat ccttttcacc accgcggcgg ccacacttgc agcgggggcc gctccggcga
     4321 aggcgccgca gttcgatacg cccgcgccga tcgcctacct ggtcgacctg tcttcgggtg
     4381 cggtgctgtt cgagcgcaat gccgaccaga ggattccgcc ggcctcgatg gcgaagatga
     4441 tgacgaccga ggtggccttc gagctgatcg accgcggcca gctggcgctc aacaagacct
     4501 gcacggtgag accggagacc tggcggaaat ggcattcgca aggctccacc atgttcctgt
     4561 cggtcaacga gcaagtgagc gttgagaatt tgctccatgg gatcgtcacc atgtcgggca
     4621 acgacgcgtc ggtggtgctc gccgaatgca tcgccggaac cgagcaggcg ttcgtcgaac
     4681 agatgaatgc cctggcgaag caactgggca tgtcgaacag ccatttctgc aacccgatcg
     4741 gttggcccga cgaaggctgc acctatgtca ccgctcgcga ccttgccact ctcgcccggg
     4801 cgacggtcga gcgccatccg aaactctaca aggacttcta cggccagact cagttcacct
     4861 ggggcaagac gctcgggtcg gggcaggaca ttacccaacc caaccgtaac ccaatcctcg
     4921 gcaaggtgcc gggcgccgac ggactcaaga ccggccacac cgacgaggcg ggatacggct
     4981 tcaccggctc cgccgagcaa aacgggcgcc ggctggtcga ggtgcttgcc ggaatgaata
     5041 gctggaacga gcgcgtgcag gaatcgacgc ggttgatgca gtggggattc aacgcctggc
     5101 aggccaagcc gctgttcaag cagggcgctg aagtggcgaa ggccaaggtg cagatggggt
     5161 cgagcagcga agtgccgctg gtggcgccgc gcgacctcgc ggtgaccgtc cccgccgggc
     5221 tcagcctgac tcgtcagatg caggtgaagg tccgctacga cggcccgatc aaggccccta
     5281 tcaagaaggg ccagcaggtc gccgagctcg tcgtcagcac gggcgacacc acgccgcagg
     5341 tcgttccgct ggtcgccggc gaggatgtcg gcgaggcggg cttcttcggc cgcgcctgga
     5401 tcggactgaa gtcgcttctc gggctcgcgt gacggcgctc ggacgtttca tcagcctcga
     5461 gggcggggag ggagtcggca agtcgaccca gcttcgagca cttgccgcaa agcttcgcga
     5521 ccgcggcttg accgttgtcg agacgcgcga gccgggcggg agcgaagcgg cggaatcgat
     5581 ccggcggcta ctgctcgacg atcatgactg gccaatggaa gcggaagcct tgctgttcgc
     5641 cgccgctcgc gccgatcatg tcgaaaagac aatcgggccc gcgctcgagc gcggcgagtg
     5701 ggtggtcagc gaccgcttcg tggattcctc cttcgcctat cagggtggtg ccggcgggct
     5761 cgggatcgag cggcttaggg aacttcacga cttcgcttgc ggcggctt
//
LOCUS       DATAKH010000059         3867 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_12176,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000059 DATAKH010000000
VERSION     DATAKH010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3867
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12176"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..828
                     /locus_tag="VHN55_02190"
     CDS             184..828
                     /locus_tag="VHN55_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802784.1"
                     /translation="MDSTPLPQPPEWPFESAVTGLVEVTDGPIDFTPVPRLRKRRNGW
                     TPEAQRAFIDALSACGCVARAARAVGKTPRSAYRLLESEGADSFAETWDQAIARGIEA
                     LRWNALDRALNGAWVPVVRRGRIVSFEHRRSDRLAIALLSGRNGSVADKRERASSRRK
                     YRMKLAAEKKREAEAQVLAEAIWAEHQAILDRLEAERDDPTPRIARTPPRIRSL"
     gene            971..2299
                     /locus_tag="VHN55_02195"
     CDS             971..2299
                     /locus_tag="VHN55_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802785.1"
                     /translation="MSRSPAVGKIARMFKQLLIFGAFAALAAACAGEGGAAADPKLVP
                     TGATIEPSGFATILDVPPAPFAAKAPGAPEPPSAEQVAAQEQFRRVAEWQNSVRDEVD
                     ALHRKLDRLEKGNFVDLYFENEGEPHVVFRFLRDPEATLAKYTSHPRFRAAKAGYTTA
                     ELAAALDFMMKTFAEERIIMGGGYGNKENRATVEIAIPEEEFRELVERKGVKIPAAVR
                     LVFRAQARAGDINRPLPAAIAPLVRIFPRDDRPVGAVNSINSYAKVVLQDGCFRASDQ
                     DNALVLFPLGAQLFVDSQGYLAFGSEETPGYARVGQEIVFMGSIAEVAAPELVRPIHA
                     ACGPGKVIKVNGMRSAAAERAQDQVTTNVNAFRQLKEMYGLLDAQASKAFEKCKRQAG
                     FGTCLLSPPRPMRSEECPAGSKLSHGLCRTPEGHIRPLPDWLKEFAGPDS"
     gene            2447..2833
                     /gene="rpsF"
                     /locus_tag="VHN55_02200"
     CDS             2447..2833
                     /gene="rpsF"
                     /locus_tag="VHN55_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004212077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEX2802786.1"
                     /translation="MPLYEHVFLARQDLAQAQVDAIAENATKILEDNGGKVVKTETWG
                     LKSLAYKIAKNRKAHFVMLDVDAPAPAIAELERQTNISEDVIRFMTIRVDEHESGPSA
                     MMKRERSGRSDRGERGDRGPRGEDRE"
     gene            2838..3062
                     /gene="rpsR"
                     /locus_tag="VHN55_02205"
     CDS             2838..3062
                     /gene="rpsR"
                     /locus_tag="VHN55_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEX2802787.1"
                     /translation="MARAFFRRRKSCPFSGKDAPRIDYKDVRLLQGFISERGKIVPSR
                     ITAVSAKKQRELAKAIKRARHIGLLPYLVK"
     gene            3076..3765
                     /gene="rplI"
                     /locus_tag="VHN55_02210"
     CDS             3076..3765
                     /gene="rplI"
                     /locus_tag="VHN55_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEX2802788.1"
                     /translation="MEVILLERVEKLGGIGDVVNVKNGFARNYLLPNKKALRANESNR
                     KVFEANRARIEAENAEKRSEAEKESKTVDGKTVQLIRQASNTGQLYGSVSARDIVDAL
                     DSEGAKVTKSQVVLARPIKSIGMHDVKIALHPEVAVTVHVNVARSPEEAELQAQGIDV
                     IQQMFEEQAAPLAAEELQADAVEPATAEAETAEPEATEPEAAEGEADEATASEEAPAA
                     TAEDENEGEQQ"
BASE COUNT          750 a         1298 c         1232 g          587 t
ORIGIN      
        1 tggttggtcg tcacgatcca accgttccgc cgctcgtcgc tttgtgtgca ctcggaccag
       61 tcgccgcgct tgtcggctca tttcgtcgtg ctgagtgatc ctgagtagcg tccgctttcc
      121 acccaaagcg gacattagaa aaaccctgtc ctacagcacc ccacttgtga tttagaatca
      181 cggatggaca gcacccctct cccgcagccg ccggaatggc cattcgaaag cgccgtcacc
      241 ggtcttgtcg aagtcaccga cggcccgatc gacttcacgc ccgtcccgcg cctccgcaag
      301 cgccgcaacg gctggactcc cgaggcacag cgcgccttca tcgacgcgct cagcgcatgc
      361 ggctgcgtcg cccgcgccgc ccgtgcggtc ggaaagaccc cgcgaagcgc ctaccgcctc
      421 ctcgaatccg aaggcgcgga cagcttcgcc gaaacttggg accaggcgat cgcgcgcgga
      481 atcgaggcgc ttcgctggaa tgcgctcgac cgagcgctga acggggcctg ggtgccggtg
      541 gtccgccgcg gcaggatcgt cagcttcgaa catcgccgca gcgaccggct ggccatcgcc
      601 ctgctgtcgg gccgcaacgg ctcggttgcc gacaagcgcg agcgcgcctc ctcgcggcgc
      661 aaataccgga tgaaactagc cgccgagaag aagcgcgagg cggaggcgca ggtgcttgcc
      721 gaggcgatct gggccgagca ccaggcgatc ctcgaccgat tggaagccga gcgcgacgac
      781 cccacccccc gcatcgcccg cacaccaccg cgcatccgga gcctttaagg acacggaaat
      841 ggtcgctcat cgcgtgactt tagtgaacat aacgcacgcg cagcctgtcc gggggatagg
      901 cgagcatgcg ttacacgcgc agcctgtccg ggggacaggc gagcatgcgt taccggtcac
      961 acgcgcgttc atgagccgct caccggcagt cggcaaaatc gcgcgcatgt tcaagcagtt
     1021 gctgatcttc ggcgcctttg cagcactggc cgcggcctgc gccggcgaag gcggcgcggc
     1081 cgccgacccg aagctggtgc cgaccggcgc aacgatcgaa ccgtccgggt tcgcgacgat
     1141 cctcgacgtc ccgccggcgc ccttcgctgc gaaggctccc ggcgcgcccg agccgccatc
     1201 ggccgagcag gtcgcggcgc aggagcagtt ccgcagggtt gccgagtggc agaactcggt
     1261 ccgcgacgaa gtcgatgcgc ttcaccgcaa gctggaccgg ctcgagaagg gcaatttcgt
     1321 cgacctctat ttcgagaacg agggcgagcc tcacgtcgtg ttccgcttcc tccgcgatcc
     1381 cgaagcgacg ctggccaaat ataccagcca cccgcgcttc cgcgccgcaa aggcgggtta
     1441 cactaccgcc gagctcgccg cggcgctcga cttcatgatg aagaccttcg ccgaggagcg
     1501 gatcatcatg ggcggcggct acggcaacaa ggagaaccga gcgacggtcg agatcgcgat
     1561 tcccgaagag gaattccgcg agctggtcga gcgcaaggga gtgaagatcc ccgccgccgt
     1621 caggctcgtg ttccgcgccc aggcccgcgc cggcgacatc aaccggccgt tgccggcggc
     1681 aatcgctccg ctggtgcgca tcttcccgcg ggacgatcgg ccggtaggcg ccgtcaactc
     1741 gatcaacagc tatgccaaag tggtgctcca ggacggctgc ttccgcgcat cggaccagga
     1801 caatgcgctg gtgctgttcc cgctcggcgc gcagttgttc gtcgatagcc aaggctatct
     1861 cgccttcggg tccgaagaga cgcccggcta tgcccgcgtc gggcaggaga tcgtcttcat
     1921 gggctcgatc gccgaggtcg cggcacccga gcttgtccgc ccgatccacg ccgcctgcgg
     1981 tccgggcaag gtcatcaagg tcaacggcat gcgaagcgct gccgccgagc gcgctcagga
     2041 ccaggtgacg accaacgtca acgcattccg ccaattgaag gagatgtacg ggcttttgga
     2101 cgcacaagcg tcgaaggcgt tcgaaaagtg caagcgccag gccggcttcg gcacctgctt
     2161 gctgagcccg ccgcggccga tgcgcagcga agaatgccca gcgggatcga agctcagcca
     2221 cgggttgtgc cggacgcctg aaggacatat ccgcccgctc cccgactggc tgaaggagtt
     2281 cgctggccca gactcctgat cggcttgctt tttgaacccc ttttcgtcat agggcgcggc
     2341 gatggggtgc aggcttcgcc tgtgccccag ttgcatttta cgacgacagc cggaggggcg
     2401 tggcactggg ccacgtcagc gatcggccaa aagagagaat aagaacatgc cgctctacga
     2461 gcatgttttc ctcgcgcgtc aggacctggc ccaggcccag gtggacgcca tcgcggaaaa
     2521 cgcaaccaag atcctcgagg acaatggcgg gaaggtcgtc aagaccgaaa cctggggcct
     2581 caagtccctc gcctacaaga tcgccaagaa ccgcaaggcg catttcgtga tgctcgatgt
     2641 cgacgccccg gcgccggcga ttgccgagct cgagcgccag accaatatca gcgaagacgt
     2701 gatccgtttc atgaccatcc gcgtcgacga gcatgaatcg ggcccgtcag cgatgatgaa
     2761 gcgcgagcgc agcggccgca gcgaccgcgg cgagcgcgga gaccgcggtc ctcgcggcga
     2821 ggacagggag taagcgaatg gcccgagcat ttttccgccg ccgcaagagc tgccccttct
     2881 ccggcaagga cgcgcccagg atcgattaca aggacgtccg cctgctccag ggtttcatct
     2941 ccgagcgcgg caagatcgtc ccgtcgcgga tcaccgcggt gtccgcaaag aagcagcgcg
     3001 agctggccaa ggcgatcaag cgcgcccgcc atatcggcct tcttccctac ctcgtgaaat
     3061 aaggagggca gaccaatgga agtgatcctg ctcgaacggg tcgagaagct cggcggcatc
     3121 ggcgatgtcg tcaacgtcaa gaacggcttc gcccgcaact acctcctgcc gaacaagaag
     3181 gcgctccgcg ccaacgaatc caaccgcaag gtgttcgagg ccaaccgagc ccggatcgag
     3241 gccgagaatg ccgagaagcg gtcggaggcc gaaaaggagt cgaagaccgt cgacggcaag
     3301 accgtccagc tgatccgcca ggcctccaac accggccagc tctacggatc ggtctcggcc
     3361 cgcgacatcg tcgatgcgct ggattccgaa ggcgccaagg tgacgaagag ccaggtggtc
     3421 ctcgctcggc cgatcaagtc gatcgggatg cacgacgtga agatcgcgct tcaccccgag
     3481 gtggcggtga cggttcacgt caacgtcgcc cgctcgcccg aggaagccga gctccaggcg
     3541 cagggcatcg acgtcatcca acagatgttc gaggaacagg ccgcgccgct ggccgccgag
     3601 gaattgcagg cggacgccgt cgagcccgca accgctgaag cggaaacggc cgagcctgaa
     3661 gcgaccgagc ccgaagcggc cgaaggcgag gcagacgaag ccaccgcttc ggaggaggct
     3721 cccgctgcca ctgccgagga cgaaaacgag ggcgagcagc agtaagcgct cgcgaaatcc
     3781 gcaaaatccg gggccgtcga tcttcgcatc ggcggccctt ttctttttcg gttcatcgca
     3841 aatcggaagc gcgtcattcg cttcgtc
//
LOCUS       DATAKH010000060         4924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_16569,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000060 DATAKH010000000
VERSION     DATAKH010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4924
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16569"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1007)
                     /locus_tag="VHN55_02215"
     CDS             complement(<1..1007)
                     /locus_tag="VHN55_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802789.1"
                     /translation="MRITPIGTCRIHTPLKRGSQRYPIALELGRNYGFVHTGAEALQL
                     IRFLHGELEIPPEVAPLVVSGGDISGFAEQSWSPADLNVVEISSAKKLLCGDHAVQIN
                     YVYRYFADFFANRERSRTFWSLIRAGHRGDLNTYLRDERSYRLLSHEDRDLLRSISFE
                     QQSFKNIKSEMTEIVDRFDSGTVMFVTHVNAKTPDEEIIPSRDRLIRWVKLAAEQLGV
                     KAFDPTAAMKAAGQEYALDNGGLDLTHYTPSFSDRIYDELHRFHIAELMGAALEGGPD
                     DASADAAATAAAHFETMLQVGDFFETSKEIHAAVARSPNSIPLIELRGIVRSRIGDFA
                     GA"
     gene            complement(1162..2439)
                     /locus_tag="VHN55_02220"
     CDS             complement(1162..2439)
                     /locus_tag="VHN55_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEX2802790.1"
                     /translation="MSEKIAVIGLGYVGLPLAVALAKKFDVLGFDVSNSRVEALRSGF
                     DWTNEVSPDELRSSGLRVTGDRSDLEGHSLFIVTVPTPIDAANRPDFGAMLTACEIVG
                     PALRPGSAVVFESTVYPGVSEEVCAPALERASGLRCGEDFTIGYSPERINPGDKERPL
                     HKITKIVAAQDEETLERIAAVYGAVIDAGIHRASCIKVAEAAKVIENTQRDVNIALMN
                     EISKICDLVGIRTSEVLEAAGTKWNFLKFYPGLVGGHCIGVDPYYLTAKAEQLGYHPQ
                     VILSGRRINDGMGAYVAQRVVKLLAMRDQPMRKARVGILGFTFKENVPDIRNSKVVDI
                     YEELRAFGIEPMVHDPVADPETVNQTYGVELKEIDELKDLSALVVAVAHDQFGAIDGA
                     GYSDMLAQDGILVDVRSRIDPASLRTDLSYWSL"
     gene            2703..3620
                     /gene="cysD"
                     /locus_tag="VHN55_02225"
     CDS             2703..3620
                     /gene="cysD"
                     /locus_tag="VHN55_02225"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008065509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEX2802791.1"
                     /translation="MQASSRSTSMTHLDRLEAESIHILRETVAEAERPVMLYSIGKDS
                     AVMLHLARKAFFPAPLPFPLLHVDTTWKFKAMYELRDKVAADPAIELIVYKNAEAEAK
                     GINPFDHGPLHTDMWKTEGLKQALDKFGFDAAFGGARRDEEKSRAKERIFSFRNASHG
                     WDPKRQRPELWSLYNVKKNKGESVRVFPLSNWTELDVWQYILREGIEIVPLYFADERP
                     CVERDGLILMVDDDRFPLNGDTPRPRKVRFRTLGCYPLSGAVESEAATVEEVVAEMLL
                     TTTSERQGRAIDKDAGAASMEKKKKEGYF"
     gene            3620..>4924
                     /gene="cysN"
                     /locus_tag="VHN55_02230"
     CDS             3620..>4924
                     /gene="cysN"
                     /locus_tag="VHN55_02230"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019053753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HEX2802792.1"
                     /translation="MARVLEHDRDLIARDVGEWLARHERKEMLRFITCGSVDDGKSTL
                     IGRLLYDCRQVFDDQLETLEAESKKAGGKGKLDFALLVDGLSAEREQGITIDVAYRFF
                     ASDKRKFIVADTPGHEQYTRNMITGASTADVAVLLIDARKGVLTQTRRHSYLAHLVGI
                     RHVLLAVTKMDLVGYDQEAFDAICSDYRRFAEKIGIEGWQAIPVSGAEGANVISRSEA
                     TPWYSGPTLLDYLDTVEIDASADAAKPLRMPVQWVNRPDQGFRGFAGQIASGRMGPGT
                     EIRILPSGRTTRIARVVTFDGDLDEAVAGQSVTVTLEDEVDCSRGDVIAAAAEPPEAA
                     DQFEATVVWMSEDELLPGRGYWMKIGTETVTATVHEPKYEVNVNTLDHLAAKTLGLNS
                     IGVAEISTDREIVFEPYDSPGTSSNRVLGGFILIDKVTNATVA"
BASE COUNT          948 a         1530 c         1563 g          883 t
ORIGIN      
        1 gcgcccgcaa aatcgccgat cctcgagcgc acgattccgc gaagctcgat cagtggaatc
       61 gaattggggg aacgggccac cgccgcatga atctccttcg aagtttcgaa gaagtcgccg
      121 acctgaagca tcgtttcgaa atgcgccgcg gcggtggcag ccgcgtcggc gctggcatcg
      181 tccggaccgc cttcgagagc ggcgcccata agctcggcga tgtggaaacg gtgaagctcg
      241 tcgtagatgc gatccgaaaa gctaggcgtg taatgagtca ggtcgagccc accgttatca
      301 agtgcatatt cctgtccagc ggccttcatc gcggcggtcg ggtcgaacgc cttcactcca
      361 agctgttcgg cggccagctt cacccagcgg atcaaccgat cgcggctggg gatgatttcc
      421 tcgtcgggcg tcttcgcgtt gacatgggtg acgaacatca ccgtgccgga gtcgaagcga
      481 tcgacgattt cggtcatttc gctcttgatg ttcttgaacg actgttgctc gaagctgatg
      541 ctccgaagca ggtcgcggtc ctcgtgcgac aggagccggt acgatcgctc gtcccggagg
      601 taagtattga gatcgccgcg gtggccggcg cggatcaggc tccagaacgt ccgtgaacgc
      661 tcgcggttgg cgaaaaagtc cgcaaaatag cgatagacgt agttgatctg gaccgcatga
      721 tcgccgcaca gcagcttctt ggcggagcta atctcgacga cattgaggtc ggctggcgac
      781 cagctttgct ctgcaaagcc actgatgtcc ccgccactga cgaccagcgg cgcaacctcc
      841 ggcgggattt ccagctcgcc gtggaggaag cggatcagct gcagggcctc cgcgccggtg
      901 tgcacgaacc catagttacg ccccagctcg agggcgatcg gatagcgctg gctaccgcgc
      961 ttgaggggtg tgtgaatccg gcaggtgccg attggagtaa tacgcatttg ggtcacaatt
     1021 cttcctgtcg gccggccttc agcgctccgt cggcacgcgg gcgcgcatat ctcctattcg
     1081 aaagtgcagc accgcagatc ggcgcggcca ccagatagcg aagcctttgg ctgttgtcga
     1141 ttagtggctc ttttcagcga tttagaggct ccaataactc aaatcggtgc gaagcgaggc
     1201 tgggtcgatc cgggaccgca cgtcgacgag gatgccgtcc tgcgcaagca tgtcgctgta
     1261 gccggcgccg tcgatcgccc caaattgatc gtgagccaca gcgaccacga gcgcagaaag
     1321 atccttgagc tcgtcgatct ccttgagctc gaccccgtag gtctggttca cggtttccgg
     1381 atcggcgaca gggtcgtgga ccatcggctc gattccgaat gcgcgcagtt cctcgtagat
     1441 gtcgacgacc ttggagttgc ggatgtcggg cacgttttcc ttgaaggtga agccgaggat
     1501 tccgaccctt gccttgcgca ttggctggtc gcgcatcgcg agcagcttga ccacgcgctg
     1561 cgcgacatag gcgcccatgc cgtcgttgat ccgccgcccc gacaggatca cctgcgggtg
     1621 gtagccaagc tgctcggcct tggcggtgag ataataagga tcgacgccga tacagtggcc
     1681 gccgaccagg cccgggtaga atttgaggaa gttccacttg gtgccggccg cttcgagcac
     1741 ctcgctggtg cggatgccga cgagatcgca gattttcgaa atctcgttca tcagcgcgat
     1801 gttcacgtcc cgctgcgtgt tctcgatgac cttcgccgcc tcggcgacct tgatgcagct
     1861 ggcgcggtgg attccggcgt cgatgacggc gccgtagacg gccgcgatcc gctccagcgt
     1921 ctcctcgtcc tgggcggcga cgatcttcgt gatcttgtga agcgggcgtt ctttgtcgcc
     1981 gggattgatc cgctcggggc tgtagccgat cgtgaaatct tctccgcagc ggagccccga
     2041 cgccctctcg agcgcgggag cgcaaacttc ctcgctgact ccgggataga cggtgctctc
     2101 gaagacgacg gcggagccgg gacggagcgc cggaccgaca atttcgcacg cggtcagcat
     2161 ggctccgaag tcgggccggt tggcggcgtc gatcggagtg ggaacagtaa cgatgaaaag
     2221 gctgtgtccc tcgagatcgg agcggtcgcc ggtaacgcgg aggcccgagg agcgtagctc
     2281 gtcaggggac acttcgttgg tccagtcgaa cccggagcgg agcgcctcta cccgcgaatt
     2341 gctgacatcg aacccgagca cgtcgaactt tttcgccagc gcgaccgcca gcggcagccc
     2401 cacatagccg agtccgatca ctgcaatctt ttcgctcatc ttgacctttg gattttacaa
     2461 aactggggcg ctctcgacgt catggcgggc agcagctgct cgtcacggcg tcgttaaacg
     2521 cgactgaaaa cggattgcgc cgaagcgcct ttccggagcg ccctccctct agaagctctg
     2581 gctggaatga caagtgaacg aggcgccgcg ccttgacttg gacgggcaag ccgagccact
     2641 gcgacagctt cagcagcccg agtgacgggc cccacattat cccggacctt cgcggctctc
     2701 gcatgcaagc ttcttcacga tcgacgagca tgacccatct cgaccggctc gaagccgaga
     2761 gcatccatat ccttcgggag acggtggccg aagccgagcg gccggtgatg ctctattcga
     2821 tcggcaagga ttcggcggtg atgctccacc tcgccaggaa agcctttttc ccggcgccgc
     2881 tgccgttccc gctgcttcac gtcgacacga cctggaagtt caaagcgatg tacgagcttc
     2941 gcgacaaggt cgccgccgac cccgcgatcg agctgatcgt ctacaagaat gcggaagcgg
     3001 aagctaaagg gatcaacccg ttcgaccacg ggccgctgca caccgacatg tggaagaccg
     3061 aagggctgaa gcaggcgctc gacaagttcg gattcgatgc cgcgttcgga ggcgctcgca
     3121 gggacgagga gaagagccgc gccaaggagc ggatcttcag cttccgcaac gcaagtcacg
     3181 gctgggaccc gaaacgccag cggccggagc tttggtcgct gtacaacgtc aagaaaaaca
     3241 agggcgaaag cgtccgggtc ttcccgctgt ccaactggac cgagctcgac gtgtggcaat
     3301 acatccttcg cgaaggaata gagatcgtcc ctctctactt tgccgacgag cggccgtgcg
     3361 tggagcgcga cgggctgatc ctcatggtcg acgatgatcg cttcccgctg aacggcgaca
     3421 cgccccgccc gcgcaaggtc cggttccgga cgctcggctg ctatccgctg agcggtgccg
     3481 tcgagagcga agcggcgacg gtcgaggaag tcgtggccga gatgctgctt acaaccacat
     3541 cggagcggca gggccgcgca atcgacaagg acgccggcgc cgcgtcgatg gagaagaaga
     3601 agaaagaggg ctatttctga tggcccgtgt cctcgaacac gaccgtgacc taatcgcccg
     3661 ggatgtcggc gagtggctgg cacgccacga gcgcaaggag atgcttcgct tcatcacctg
     3721 cggaagcgtc gacgacggca agtcgacgct gatcgggcgg ctgctttacg actgccggca
     3781 ggtgttcgac gaccagctgg agacgctgga ggcggagagc aagaaagcgg gcggcaaggg
     3841 caagctcgat ttcgcgctcc tcgtcgacgg gctttcggcc gagcgcgagc agggcatcac
     3901 catcgacgtc gcctatcgct tcttcgcaag cgacaagcgc aagttcatcg tcgccgacac
     3961 gccgggccac gagcaatata cccgcaacat gatcaccggg gcgtcaaccg ccgatgtcgc
     4021 ggtgctgctg atcgatgcgc gcaagggcgt tctgacccag acccgccgcc actcctatct
     4081 cgcccacctg gtcgggatcc gccacgtcct gctggcggtg accaagatgg acctggtcgg
     4141 ctatgaccag gaagcgttcg acgcgatctg cagcgactat cgccggttcg ccgagaagat
     4201 cgggatcgaa ggctggcagg cgatcccggt ttcgggagcc gagggcgcca acgtcatcag
     4261 ccggagcgaa gcgactccct ggtattccgg gccgaccctg ctcgattatc tcgacaccgt
     4321 cgaaatcgat gccagcgcgg acgccgccaa gccgcttcgg atgccggtgc aatgggtcaa
     4381 ccgcccagac cagggctttc gcggattcgc cggccaaatc gcttcgggac ggatggggcc
     4441 gggcaccgaa atccggatcc tgccgtccgg ccggaccacg cggatcgcgc gggtcgtcac
     4501 cttcgacggc gatctcgacg aggcagtcgc cggccagtcg gtcacagtca cccttgagga
     4561 cgaagtcgat tgctcgcgcg gggacgtcat cgccgccgcg gccgaaccgc ccgaagccgc
     4621 agaccagttc gaggccacgg tcgtgtggat gagcgaggat gagctgctcc ccggccgcgg
     4681 ctactggatg aagatcggga ccgagacggt caccgcaacc gtccacgagc ccaagtacga
     4741 agtgaacgtc aacacacttg accatctcgc cgcgaaaacg cttgggctca attcaatcgg
     4801 cgtggcggag atctcgaccg atcgcgaaat cgttttcgag ccctatgact cgcctgggac
     4861 gagctccaac cgcgtgctcg gcggattcat cctcatcgac aaggtgacca acgccaccgt
     4921 cgcc
//
LOCUS       DATAKH010000061         2143 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36324,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000061 DATAKH010000000
VERSION     DATAKH010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36324"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..156
                     /gene="ppnK"
                     /locus_tag="VHN55_02235"
     CDS             <1..156
                     /gene="ppnK"
                     /locus_tag="VHN55_02235"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668341.1"
                     /note="catalyzes the phosphorylation of NAD to NADP;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEX2802793.1"
                     /translation="QHRPVSAVADQFEVRDVAQVDVRLDRERSLTLLFDPEHALDERI
                     AMEQFAT"
     gene            223..297
                     /locus_tag="VHN55_02240"
     tRNA            223..297
                     /locus_tag="VHN55_02240"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:255..257,aa:Asn,seq:gtt)
     gene            435..1313
                     /locus_tag="VHN55_02245"
     CDS             435..1313
                     /locus_tag="VHN55_02245"
                     /inference="COORDINATES: protein motif:HMM:NF020604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stf0 family sulfotransferase"
                     /protein_id="HEX2802794.1"
                     /translation="MRLRLFANSRRGSNPLNCNGWMMASVDCLPRTREELLDLCTHYF
                     GEERVRKIQKGLAMPRHGGFRAPDKILMMLFPSRSGSNYFGQLLSSTGWFNEIAESFN
                     HLQLAKIRERKGLADTHEAVQWMIDNRGTEHAFGFKAGFFVLTGAVETGFLSEVIDRT
                     EVVLLRRRDRIAQGISLEKMKLTGRRHSRQPLERPLRDDDYDGDSIRRQVLNIINTEK
                     KLADCAERLGKTAPLYYYEDICAEPETHVRKVCDLLGLEMPENYAPTKVRLKVLRDEL
                     SERWADRFRNEYPDIS"
     gene            1335..>2143
                     /locus_tag="VHN55_02250"
     CDS             1335..>2143
                     /locus_tag="VHN55_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802795.1"
                     /translation="MNDVDEKQAARPPKRHDPLCSFPERVEQLEAAKPMSDRTRANLV
                     RALDSINPAERESFLEKHRDKLQDIETLASVKYADFGYWAHRNVILAEWLDLDRSPPL
                     DILDIGAGSGNFGMVAQSMGHRVIGTDVADDWYDELCRLTKVTRLVAPVVRGERYKPV
                     DQRFDLVTIMLPAFHRKRVKGKREYWSVEDWRLFLLGLVQDLLKPNGSIFILMPLDKD
                     DEGNLSYSPLVEWSRERGARLDRTFKKGPVRHILFNPATEATFAEQPPQVAV"
BASE COUNT          431 a          673 c          649 g          390 t
ORIGIN      
        1 caacaccgcc ctgtttcggc cgtggccgac cagttcgagg tacgcgacgt cgcccaggtt
       61 gacgtccggc tcgacaggga gcggtcgctg accctgctgt tcgatcccga gcacgcgctc
      121 gacgaacgaa tcgcgatgga acaattcgcg acgtaacttt ttgcttggcc ttgcctttga
      181 ggcgggcttc gctatctagc cgccacgctt cgacagaggt gttccccggt agctcagcgg
      241 tagagcgttc gactgttaat cgaatggtcg cctgttcgaa tcaggcccgg ggagccatct
      301 ttctccagcc gtaaccccta gatcgccgcc gaaaaattcg cgccagagcg gtgggacaag
      361 tgggttgtca ttaccctaac cttcgttatt gaccgggctt gcccggcaac gggcgttccc
      421 cggtagcgcg ccgattgagg ctccgactgt tcgcaaacag tcgccgcgga tcgaacccgc
      481 tcaattgcaa cggatggatg atggccagcg tcgactgttt gccaaggaca cgcgaagaac
      541 tccttgacct gtgcactcac tatttcgggg aagagcgggt ccggaaaatc cagaaaggcc
      601 tggcgatgcc gcgccacggc ggctttcgcg cacccgacaa gatcctgatg atgctgttcc
      661 cgtcacgctc gggaagcaat tattttgggc agctgctgtc gagcaccggc tggttcaacg
      721 agatcgcgga aagcttcaac cacctgcagc tggcgaagat tcgcgagcgc aaaggcctcg
      781 ctgacaccca cgaggccgtg cagtggatga tcgacaatcg cggcaccgag catgcgttcg
      841 gattcaaggc cggtttcttc gtcctgacgg gagcggtcga gaccggattc ctgtccgaag
      901 tcattgatcg gaccgaggtg gtacttctcc gtcgccgcga ccggatcgcg cagggcattt
      961 cactcgaaaa gatgaagctc accgggcgca ggcacagccg ccagccgctg gaacgcccgc
     1021 tcagggacga cgattatgac ggcgattcca tccgccgcca ggtcctcaac attatcaaca
     1081 ccgaaaagaa gctcgccgat tgtgccgagc ggctcgggaa gacggcgccg ctctattatt
     1141 acgaggacat ctgcgccgag ccggaaacgc acgtccgcaa ggtatgcgat ctgctgggcc
     1201 tggagatgcc ggaaaactac gcaccgacga aggtccggct taaggtactc cgcgatgagc
     1261 tcagcgaacg ctgggcggac cgcttccgca acgaatatcc cgacatcagc tgacccgcgc
     1321 cagaggactg aaagatgaat gacgtggacg agaagcaagc ggcgagaccg ccgaaaaggc
     1381 acgatccgct gtgctcgttc cccgagcggg tggaacagct cgaggccgcc aagccgatga
     1441 gcgaccgaac ccgcgcgaat ctcgttcgcg ccctcgactc catcaatccg gccgagcggg
     1501 agtctttcct cgagaagcac cgcgacaagc tccaggacat cgagactctc gcgtccgtca
     1561 aatatgctga tttcggctat tgggcgcacc gcaacgtcat cctcgcggaa tggctcgacc
     1621 tcgaccgctc gccgccgctc gacatcctcg atatcggcgc cggctcgggt aatttcggga
     1681 tggtcgcgca gtctatgggc cacagggtga tcggcaccga tgtggccgac gactggtatg
     1741 acgagctgtg caggctgacc aaggtgacga ggctggtcgc tcctgttgtt cgcggcgagc
     1801 gttacaagcc ggtcgaccag cggttcgacc tggtcacaat catgctccct gccttccatc
     1861 gcaagcgcgt gaaggggaag cgcgaatatt ggtccgtcga ggactggcgg ctgttccttc
     1921 tcggtctcgt gcaggacctg ctgaagccaa acgggagcat cttcatcctc atgccgctcg
     1981 acaaggacga cgagggcaac ctcagctatt cgccgctggt cgaatggtcc cgcgagcgcg
     2041 gcgcccggct cgaccggacg ttcaaaaagg gcccggttcg ccacattctc ttcaatcccg
     2101 cgaccgaggc gaccttcgcg gagcagccgc cccaagtcgc cgt
//
LOCUS       DATAKH010000062        13544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_9067,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000062 DATAKH010000000
VERSION     DATAKH010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 13544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13544
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9067"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VHN55_02255"
     CDS             <1..594
                     /locus_tag="VHN55_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2802796.1"
                     /translation="FLIERDMEGFSIGQKIDKLGMRGSPTSELVFDDCFVPPENVLGE
                     ENKGVEVLMSGLDYERTVLAGIQIGIMQACLDVVLPYVRDRKQFGKPIGSFQLMQAKV
                     ADMYVALNSARAYAYQVAKACDAGKTTRFDAAGAILLASDNAVKVASEAVQALGGAGY
                     TKDWPVERYYRDAKLLDIGAGTNEIRRMLIGRELIGA"
     gene            649..1455
                     /locus_tag="VHN55_02260"
     CDS             649..1455
                     /locus_tag="VHN55_02260"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX2802797.1"
                     /translation="MRVIGTIAFLLLTACSKAPERAQAAQPAEITFEGAKVTEASARI
                     AHGERLARVLGCRGCHGQDLRGQRFYELYASNLTRDVPKYSDAQLERLIRHGERTDGK
                     NVWAMPSEIFQHLSDSDYSAVVDYLRSLKPGGAPTQPRLPWEPDALEMIRSGKILPAA
                     QSVVRDRSKVPFDAGPQYALGRYITMVTCAECHGAELSGGDDTPDLVTAGGYSREEFE
                     TLITKGVPNGGRKFKNPLMGQVARNRFSRLTPKERDSLYAYLKARAERPQ"
     gene            complement(1467..3542)
                     /locus_tag="VHN55_02265"
     CDS             complement(1467..3542)
                     /locus_tag="VHN55_02265"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HEX2802798.1"
                     /translation="MRKPLLLIFASAIALSACNTQAPTNEAQTQAQGTELGIVPAAMD
                     TSVKPGDDFYMYANGAWMKATEIPGDRSSVGAFLIADDVREKNTRELFDDILKSNPDA
                     GTDEGRIANYYKAYLDTAAIDRAGMAPAKADLDAIAAISNKQELSTAIGKSLRADVDP
                     LNATNYQTDNLFGVFVTQGLATPGEQLPYLLQGGIGMPEREYYLSSDPEMAALRDKYV
                     QYVETVMKAAGNPDPAGAAKRIMALETMIAQAHATREESEDFSKGAQVWTRAELEKKA
                     PGLDWTALLNAAQLGNVAKFDAYHPNAIPKLAALVGSQPLDVWKEWLAFHTLNQHTSA
                     LPKPLRDASFAFYGTALSGTKEQRPREKQALNATSGALQDAVGKAYVERYFPASAKAE
                     VQRMVDGIKAAFAKRVQALDWMAPSTKEEALKKVKSIVVGVGYPDSWRDYSKVTISPT
                     DAYANQSAVRLAEYQHQIAKIGKPMDRSEWWMPPQLVNAVNLPVQNALNFPAAILVRP
                     FFDPKADAAFNYGAIGSVIGHEISHSFDNNGALFDSTGKLHNWWTPEDLKRFEQSGAA
                     LAAQYDKYEPLPGLHLNGKLTLGENIADVAGLAAAYEAYRDSLGGKEAPTIGGFTGDQ
                     RFFIAYAQAWASKMRDASMRARIATDGHAPGQYRALTVRNLDPWYSAFDVKPGQKLYL
                     KPEERVKVW"
     gene            3663..5264
                     /locus_tag="VHN55_02270"
     CDS             3663..5264
                     /locus_tag="VHN55_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010337444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX2802799.1"
                     /translation="MSAPKLDTKIDRDSDEYRARAEHNRRLVDKLRGDVAEAAKGGPE
                     KHRKRHVERGKLLPRDRVERLLDPGSPFLEIGQLAACDMYEGEVPGAGIIAGIGRVSG
                     RQVMIICNDATVKGGTYYPLTVKKHLRAQEIAEQNRLPCVYLVDSGGANLPHQAEVFP
                     DRDHFGRIFYNQAQMSAKGIAQIACVMGSCTAGGAYVPAMSDESVIVKEQGTIFLGGP
                     PLVKAATGEEISAENLGGGDLHARKSGVVDHLAENDEHALTIVRDIVSTLQKERGAGL
                     QMREPRPPAFDVEELYGIIPEDVRAPYDVHEVIARIVDGSEFHEFKPLYGSTLVCGFA
                     HIWGMPVAILANNGILFSESAVKGAHFIELAAMRRTPLLFLQNISGFMVGGKYEAEGI
                     AKHGAKLVTAVATAQVPKITLLIGGSFGAGNYGMAGRAYSPRFLFTWPNSRISVMGGE
                     QAASVLATVHRDADKWTDAQAEKFKQPIRDTYEAEGNPWHATARLWDDGIIDPAQTRD
                     VLGLAFAACLNAPIAERPSFGVFRM"
     gene            5267..5734
                     /locus_tag="VHN55_02275"
     CDS             5267..5734
                     /locus_tag="VHN55_02275"
                     /inference="COORDINATES: protein motif:HMM:NF025447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4262 domain-containing protein"
                     /protein_id="HEX2802800.1"
                     /translation="MLNSVQQQIVDGVEQNGWFTVNYVPGPDDPPEYFTYTVGLTKTA
                     GWPEIICFGLDPERTFGMLRDTIAECWEREIRPADGVELNKVLKDLPARLQRVDDLTA
                     PYFAMADWYAEHSGTPRTAERLQLLWPDPEGRFPGDPKCGAYARDKQTPKAAQ"
     gene            5731..7605
                     /locus_tag="VHN55_02280"
     CDS             5731..7605
                     /locus_tag="VHN55_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007165184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl/propionyl/methylcrotonyl-CoA carboxylase
                     subunit alpha"
                     /protein_id="HEX2802801.1"
                     /translation="MIGSLLIANRGEIACRVIRTARQLGVRTVAVYSDADAKALHVRM
                     ADEAVHIGPSPANESYLRGDKIIAAAKETGAEAIHPGYGFLSENADFAQAVIDAGLVW
                     VGPKPASIRAMGLKDAAKKLMADAGVPVTPGYLGEDQDPKRLKKEADAIGYPVLIKAV
                     AGGGGKGMRRVDDAKGFDDALDSAKREAASSFGDDRVLIEKFIASPRHIEVQVFGDSH
                     GNVVHLFERDCSLQRRHQKVIEEAPAPGMDEETREAVCGAAVRAAKAVNYEGAGTIEF
                     IADASEGLRADRIWFMEMNTRLQVEHPVTEEITGQDLVEWQLRVASGEKLPRAQDELS
                     ITGWAIEARLYAEDPAKGFLPSVGKLDHFDLGEDGRVETGVEEGDAISAYYDPMIAKL
                     IASGDDRDEAIDGLATMLDSVEVWPVRTNAAFLFNALTSDQFCNAAIDTGFIERRLDA
                     LVPDPEPDEEIWRGAATVAWLAGEADADLPGPSGFRLNAPTLARVALASNGEFRAVDL
                     DGQMPDISGFADVDRVIVFREGQGYGFDLSARGSVGAHGSSDGVITAPMPGKVASVDI
                     SQGANVSKGQRLLTLEAMKMEHGLTAPFDGVVAELNAKEGAQVVEGAVLARVEPEETK
                     "
     gene            7602..8381
                     /locus_tag="VHN55_02285"
     CDS             7602..8381
                     /locus_tag="VHN55_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013833109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2802802.1"
                     /translation="MNINGISAVVTGAASGLGEATARELAKRGAKVAIFDRDQDKGEK
                     VASEIGGVFCEVDVTSDEAVAAAFEKAREAHGQERVLVNCAGVANAAKTVGRDKETKE
                     PRFYPMVQFELAIQINLIGTFRCIAHSAFGMMNLDPLEDGERGCIVNTASVAAQDGQI
                     GQVAYSASKGGVLAMALPIARDLMNDGVRVNTILPGVFKTPMVAMMPPKVQDALGEQV
                     PFPKRLGQPEEYARLACFMVENPYLNAEAVRLDGGIRMAPR"
     gene            8378..9208
                     /gene="cysQ"
                     /locus_tag="VHN55_02290"
     CDS             8378..9208
                     /gene="cysQ"
                     /locus_tag="VHN55_02290"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014848587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEX2802803.1"
                     /translation="MISDRKQLLADIAVAAAEAGEAILKIVEGGFEVESKADQSPVTI
                     ADRAAELIILAALAKAAPGVPVVAEEEVAAGRIPDFSDTYFLVDPLDGTKEFIRGGDD
                     YTVNIGLIANGTPLLGAVFAPARGSLFAGIVGEGAWMEDSKGRRAIRTRERGQAITAV
                     ASKSHFNQPTADYLAKAVGECDYAAIGSSLKFCIVAEGKADIYPRLAPTSEWDTAAAH
                     AVLLAAGGQVDGPDGEPLGYGKHAFLNRGFVATAGWKAPPIGPFLHPFSGGGDVPEGV
                     "
     gene            complement(9205..9468)
                     /locus_tag="VHN55_02295"
     CDS             complement(9205..9468)
                     /locus_tag="VHN55_02295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802804.1"
                     /translation="MEQIAMRAAWLAQLSDAIEGAQRLAWQLGTRHHPSLEARELYGR
                     LEAARIELESLRGVTSNRRAGELPDSEWLETLGWNGPIPEPTP"
     gene            9643..10560
                     /locus_tag="VHN55_02300"
     CDS             9643..10560
                     /locus_tag="VHN55_02300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEX2802805.1"
                     /translation="MDALMTETSFSYDGPPPLLIAATSDAAMRRASETAAASGARVAA
                     RLGISEARERLSQQASASAIWIEVDRDCGRELEGLLDDVDDRVERRRFGAVVSLTSEL
                     IDLLGDRLFDGSSQFVVDADPIERVASLATATAIANAPQRANDVSKDPGAERLRQLSD
                     EVGRIAATLARLSTVPAAPEAELRKPVEDEIPDVSADTVRSVIRARRLRGRFFSEDLF
                     ADPAWDMLLDLLQAEIAQLRVPVSSLCIAAAVPATTALRWLKSMTDKGLFVRRADPHD
                     GRRVFVELSRDASAAMRRYFAEVGRPAVV"
     gene            complement(10582..10657)
                     /locus_tag="VHN55_02305"
     tRNA            complement(10582..10657)
                     /locus_tag="VHN55_02305"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10622..10624),aa:Val,seq:tac)
     gene            complement(10831..11418)
                     /locus_tag="VHN55_02310"
     CDS             complement(10831..11418)
                     /locus_tag="VHN55_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX2802806.1"
                     /translation="MITRIREVRRARGMTLDEVARACVPPTTPQTIGRLETGSRTVSV
                     GWLNRIANALEVDAADLVESGGEKMDVPVAAIVSANGANAPKRTAIVVPPRPKAGDIA
                     VTVSASAGDYRAGDEIWCETLQPEEFGRALNRDVLVPRPGGRFLFGRLIGREAPNEGE
                     SSGKLHLLPLGAGMRQQVITNAPWLAMAVKLVRSL"
     gene            11512..12009
                     /locus_tag="VHN55_02315"
     CDS             11512..12009
                     /locus_tag="VHN55_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017666147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6456 domain-containing protein"
                     /protein_id="HEX2802807.1"
                     /translation="MARIENGRMLVERAIGRDGETLRGAGRRGVRSVTVNAAESPLGW
                     LFARGLVTRRQFDAGEHLRSDWQRGGLSARITMQWDAAPVGRQRGGAGGAPDLAAAQI
                     DARRRFERAVEAAGPGLSDILWRVVCSGEGMREAETALGWPARAGKVVLALALDRIAD
                     FYRIR"
     gene            complement(12006..12212)
                     /locus_tag="VHN55_02320"
     CDS             complement(12006..12212)
                     /locus_tag="VHN55_02320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802808.1"
                     /translation="MRRNSGKDESRDRFLDPTVKGHERERGKSGTAVLDRDANKGEIE
                     DNRGQRTTGMGSNARKTGTKGEDR"
     gene            complement(12224..12421)
                     /locus_tag="VHN55_02325"
     CDS             complement(12224..12421)
                     /locus_tag="VHN55_02325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802809.1"
                     /translation="MNSISSNSDSRRDLEDVLEEEPQSKRGKQGQAAHGGDQAGANSA
                     DGGKPQAPQTGNPRADDRRPS"
     gene            12495..13145
                     /locus_tag="VHN55_02330"
     CDS             12495..13145
                     /locus_tag="VHN55_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2802810.1"
                     /translation="MILYGSSLSPYVRKVIAYGSEKGIEFDIQPVGPGDPNPEFRKAS
                     PFGKMPGLADGDYYLADSSAIIHYLEAKHTEPALIPSDPELRGKCIWFEEFADTILAG
                     CGAKMFFNRVVAPLFLKRQGDLAVADAAEREELPKVLDYIESVAPDGEGYLVGDTLTL
                     ADIAVAGPFANLQHLKVEIDPARWPKTVGFTKRILMRPSFAPLVARESAFLAKVAA"
     gene            complement(13202..>13544)
                     /locus_tag="VHN55_02335"
     CDS             complement(13202..>13544)
                     /locus_tag="VHN55_02335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802811.1"
                     /translation="ESMGGQSGQQSEFGQQSGQTQDSQGGQQGEAQTDVADRTGERGS
                     AEGGSQGGSTGGFVGSQDSDSSEYLQEGKTEQAGFAEQGRGAREDESDIEGSSERDRS
                     RSSDIEGSSEQ"
BASE COUNT         2353 a         4303 c         4484 g         2404 t
ORIGIN      
        1 ttcctgatcg agagggatat ggaaggcttc tcgatcgggc agaagatcga caagctcgga
       61 atgcgcggca gcccgaccag cgagctggtc ttcgacgatt gcttcgtccc gcccgaaaat
      121 gtgctcggcg aggaaaataa aggcgtcgag gtgctgatga gcgggctcga ctacgagcga
      181 accgtgcttg ccgggatcca gatcgggatc atgcaggcct gcctcgacgt cgtcctgccc
      241 tacgtccgcg accgcaagca gttcggaaag ccgatcggaa gcttccagct gatgcaggcc
      301 aaggtcgccg acatgtacgt cgcactcaac agcgcgcggg cctatgcgta ccaggtcgcc
      361 aaggcctgcg acgcggggaa gacgacgcgg ttcgacgcag ccggcgcgat ccttctcgcc
      421 agcgacaatg cggtcaaggt cgcgagcgag gctgtgcagg cgctcggcgg cgccggctac
      481 accaaggact ggccggtcga acgctattac cgcgacgcca agcttctcga tatcggcgcc
      541 gggaccaacg aaatccgccg aatgctcata gggcgtgagc tgatcggcgc ttagcgctcg
      601 ctaagcccct cgcgctgcgc taatttcggc gtttggggga gagggcaaat gcgcgttatc
      661 ggcacaattg catttctctt actgacggcc tgttccaagg cgccggaacg ggcacaggcc
      721 gcgcagcccg cggaaatcac cttcgagggc gcgaaggtca ccgaggcctc cgccaggatc
      781 gcacatggcg agcgactggc gagggttctc ggctgccggg gctgccacgg ccaagatctc
      841 cgcggccagc gcttctacga gctttacgcc tccaatttga ctcgcgacgt acccaaatat
      901 tccgatgcgc aactcgagcg cctgatacgc cacggcgaga gaaccgacgg taaaaacgtc
      961 tgggcgatgc cttcggagat attccagcac ctcagcgaca gcgattattc ggccgtcgtc
     1021 gattatctcc ggtcgctcaa gcccggcggc gctccgacgc agccaaggct gccgtgggag
     1081 ccggacgcac tggagatgat acggtccggc aaaatcctac cggcagcaca atcggtggtt
     1141 cgcgaccgct caaaggtccc tttcgacgcc gggccgcaat acgcgctcgg tcgctacatc
     1201 acgatggtca cctgtgcgga gtgccacggg gcagagttga gcggtgggga cgacacgccc
     1261 gaccttgtca ccgcgggcgg atactcgcgc gaggagttcg agacgctgat caccaaaggc
     1321 gttccgaacg gagggcgaaa gttcaagaac ccgttgatgg ggcaagttgc ccgcaaccgt
     1381 ttctctcgcc tcacgccaaa agagcgcgac tcgctctacg cttacctcaa agctcgcgca
     1441 gagcggccgc aatagacgtc gcgtcgctac cagaccttca cgcgctcttc gggcttcagg
     1501 tacagcttct gccccggctt gacgtcgaat gccgagtacc acggatcgag gttacggacg
     1561 gtgagcgccc ggtactggcc cggggcatgg ccgtcggtgg cgatccgcgc acgcatcgac
     1621 gcgtcccgca tcttcgacgc ccaggcctga gcgtaggcga tgaagaagcg ctggtcgccg
     1681 gtgaacccgc cgatcgtcgg cgcttccttg ccgcccaggc tgtcgcgata ggcttcgtag
     1741 gccgccgcga ggccggcgac gtcggcgata ttctccccca gcgtcagctt gccgttgagg
     1801 tgtaaccccg gaagcggctc gtacttgtca tattgggccg caagcgccgc gcccgattgc
     1861 tcgaagcgct tcaaatcttc cggagtccac cagttgtgga gcttgccggt ggaatcgaac
     1921 agggccccgt tattgtcgaa gctgtggctt atctcatgcc caatgaccga gccgattgcg
     1981 ccatagttga acgcggcgtc ggccttggga tcgaagaatg gccggaccag gatcgctgct
     2041 ggaaagttga gcgcgttctg gacgggcagg ttgaccgcat tgaccagctg cggcggcatc
     2101 caccattcgg accggtccat cggcttgccg attttcgcga tctggtgctg gtactcggca
     2161 agccggacgg cgctctggtt cgcataagcg tcggtcgggc tgatcgtcac cttcgaataa
     2221 tcgcgccagc tgtcgggata gccgactccg acgacgatcg acttcacctt cttcagcgcc
     2281 tcttccttgg tcgagggcgc catccagtcg agcgcctgaa cgcgcttggc gaaagcggcc
     2341 ttgataccgt cgaccattcg ctggacctcc gccttggcgg aagccgggaa gtagcgctcg
     2401 acataggcct tgccgaccgc gtcctggagc gctccgctgg tcgcgttaag cgcctgcttc
     2461 tcgcgcgggc gctgctcctt cgtcccgctt agcgcggtcc cgtagaaggc gaaggacgcg
     2521 tcgcggagcg gctttggaag ggcgctcgtg tgctggttga gcgtgtggaa cgccagccat
     2581 tccttccaca cgtcgagcgg ttgcgagccg acgagcgcag cgagcttcgg gatcgcattg
     2641 ggatggtaag cgtcgaattt cgccacgttc cccagctgtg ccgcattgag cagggcggtc
     2701 cagtcgagtc ccggcgcctt tttctccagc tcggcgcgag tccagacctg ggcgcccttg
     2761 gagaagtcct cgctttcctc gcgcgtggca tgtgcctgcg cgatcatggt ctcgagcgcc
     2821 atgatccgct ttgctgcgcc ggcggggtcg ggattgccgg cggctttcat caccgtctcg
     2881 acatattgaa catacttgtc gcgaagggcg gccatttcgg ggtcgctgga caaataatat
     2941 tcgcgctccg gcatgccgat cccgccctgc agcaggtagg gcagctgctc gcctggagtc
     3001 gccagcccct gggtgacgaa caccccgaac aaattatcgg tctggtaatt ggtcgcgttg
     3061 agcgggtcga cgtcggcgcg gagcgacttt ccaatagccg tgctgagctc ctgcttgttc
     3121 gaaattgccg cgatcgcgtc gagatccgcc ttggctggcg ccattccagc gcggtctatc
     3181 gcggcggtgt cgagataggc cttgtagtaa ttggcgattc gaccttcgtc ggtcccggcg
     3241 tcgggattgg acttgaggat gtcgtcgaac agctcgcgcg tgttcttctc gcggacatcg
     3301 tcggcgatca ggaacgcgcc gacggacgag cggtcgcccg gaatttccgt ggccttcatc
     3361 catgcgccgt tcgcgtacat gtagaaatcg tcacccggct tgaccgacgt atccatcgcc
     3421 gccgggacga tgccgagttc ggttccctgc gcctgcgttt gcgcttcgtt ggtcggagct
     3481 tgcgtgttgc acgcgcttag agcgatcgcg gacgcaaaga tcaggagcag gggctttctc
     3541 atgcggagtc cttttgcttc ggtgtcggac gcgcaactgc cgctggcggt cgcgctttgc
     3601 aatggctgcc gcagccgcta ggcgaacggc agggcaattc tacgaacgga cctgtggagc
     3661 ggatgagcgc gccaaagctc gataccaaaa tcgaccgcga cagcgacgaa tatcgcgctc
     3721 gcgccgagca taaccggcgg cttgtcgaca agttgcgggg cgacgttgcc gaagcggcga
     3781 agggcgggcc ggagaagcac cgaaagcgcc atgtcgagcg cggcaagttg cttccacgcg
     3841 atcgggtgga aaggcttctc gaccccggct cgccgttcct cgagatcggc cagctcgccg
     3901 cttgcgacat gtacgaaggc gaggtgcccg gtgcggggat catcgccgga atcggccggg
     3961 tgtccggccg gcaggtgatg atcatttgca acgacgcaac ggtgaagggc gggacctatt
     4021 acccgctgac cgtgaagaag catttgcggg cgcaggaaat cgccgagcag aaccgtcttc
     4081 cgtgcgtcta cctcgtcgat tcgggcggcg ccaacctgcc gcaccaggcc gaggttttcc
     4141 ctgaccgcga tcacttcggc cgcatcttct acaaccaggc gcaaatgagc gcgaagggca
     4201 tcgcccagat cgcctgcgtg atgggaagct gcaccgccgg cggcgcctat gtcccggcaa
     4261 tgagcgatga gagcgtcatc gtgaaggagc aggggacgat cttccttggc ggcccgcctt
     4321 tggtgaaggc cgcgaccggc gaggagatct cagccgagaa tctgggcggc ggcgatctcc
     4381 atgcgcgcaa gagcggggtc gtcgatcatc tcgccgagaa cgacgaacat gcgctgacaa
     4441 tcgttcgcga catcgtctcg acactgcaaa aggagcgcgg ggcagggctg cagatgcgcg
     4501 agccgcggcc gcccgctttc gatgtcgaag aattgtacgg catcatcccc gaggacgtcc
     4561 gcgcgcccta cgacgtgcac gaggtcatcg cgcgcatcgt cgacggctcc gaattccacg
     4621 agttcaagcc gctttacggg tcgacgctgg tgtgcggttt cgcgcacatc tggggaatgc
     4681 cggtcgcaat cctcgccaat aacggcatcc tgttcagtga gagcgcggtc aagggcgcgc
     4741 acttcatcga gctggcggcg atgcggcgga ctccgctgct gttcctccag aacatctccg
     4801 gcttcatggt cggcgggaag tacgaagcgg aaggaatcgc caagcacggc gccaagctgg
     4861 tgaccgccgt cgcgacagcg caggtgccca agatcacatt actgatcggc ggcagcttcg
     4921 gtgcgggcaa ttacgggatg gccggccgcg cttattctcc caggttcctg ttcacctggc
     4981 ccaacagccg gatcagcgtg atgggcggag aacaggcggc atcggtactg gccaccgtcc
     5041 accgcgacgc cgacaagtgg acggacgcac aggccgagaa attcaagcaa ccgatccgcg
     5101 acacctacga agcggagggc aacccctggc acgccacggc gcggctgtgg gacgatggga
     5161 ttatcgaccc cgcgcagacc cgggatgtgc tcgggctggc cttcgccgcg tgcctgaacg
     5221 cgcccattgc ggaaaggccg tcgttcggcg tgttcaggat gtaaagatgt tgaattcagt
     5281 gcagcaacag atcgtcgacg gcgtcgagca gaacggctgg ttcacggtga actacgtccc
     5341 gggccccgac gatcccccgg aatattttac ctacaccgtc ggtttgacca agaccgccgg
     5401 ctggcccgag attatctgct tcgggctcga tccagagcgg accttcggca tgttgcgcga
     5461 cacgatcgcc gaatgctggg aacgcgaaat ccggccggcc gacggtgtcg agctgaacaa
     5521 ggttctcaag gacctgccgg ctcgtctgca gcgggtggac gaccttacgg ctccctattt
     5581 cgcgatggcg gactggtatg ccgaacatag cggcacgccc aggacagcgg agcggctgca
     5641 actgctttgg cccgacccgg aaggacggtt tcccggcgat ccgaaatgtg gcgcgtacgc
     5701 gcgcgacaaa caaacgccca aagccgcgca gtgatcggat ccctgctcat cgccaaccgc
     5761 ggcgagatcg cgtgccgagt gatccgcacg gcgcggcaac tcggcgtgcg cacggtcgcc
     5821 gtctactcgg acgccgacgc gaaggcgctt catgtgcgca tggcggacga agcggtgcac
     5881 attgggccga gcccggcaaa cgagtcctac ctgcgcggcg ataagatcat cgccgcggcg
     5941 aaagagaccg gagcagaggc gatccacccg ggctacggct tcctttcgga aaatgcggac
     6001 ttcgcgcagg cggtgatcga cgccggactg gtgtgggtcg gcccgaagcc ggccagcatc
     6061 cgcgcgatgg ggctcaagga cgcggccaag aagctgatgg ccgacgcggg cgttccggta
     6121 acccccggct atctcggcga ggaccaggac ccgaagcggt tgaaaaagga agccgacgca
     6181 atcggctacc cggtgctgat caaggcggtt gcgggcggcg gcggcaaagg catgcggcgg
     6241 gtcgacgacg ccaagggctt cgacgatgcg ctcgacagcg ccaagcgcga ggcggcgtcg
     6301 agcttcggcg acgaccgcgt gctgatcgag aagttcatcg cctcgccgcg ccatatcgag
     6361 gtgcaggtgt tcggcgacag ccacggcaat gtcgtccatt tgttcgagcg cgactgctcg
     6421 ctccagcggc ggcaccagaa ggtgatcgag gaggcgccgg cgccgggcat ggacgaggag
     6481 acccgcgaag ccgtctgcgg cgccgctgtg cgtgccgcca aggcggtgaa ttacgaaggc
     6541 gccgggacga tcgagttcat cgccgacgct agcgaaggcc tccgcgcgga ccgaatctgg
     6601 ttcatggaga tgaacacgcg gctgcaggtc gagcatccgg tgacggagga gatcactggc
     6661 caggacctgg ttgagtggca gctccgcgtc gcctcgggcg aaaagcttcc gagggcgcag
     6721 gacgaattat cgatcaccgg ctgggcgatc gaggcgcggc tctacgcgga ggacccggct
     6781 aaggggtttt tgccaagcgt tgggaagctc gatcatttcg atctgggcga agacgggcgg
     6841 gtcgaaaccg gagtcgagga aggcgacgcg atctcggctt actatgatcc gatgatcgca
     6901 aagctgatcg cctcgggcga cgaccgcgac gaagcgatag acggacttgc aacgatgctg
     6961 gatagcgtgg aggtgtggcc agtcaggacc aacgccgcgt tcctgttcaa cgcgcttacc
     7021 tccgatcaat tctgcaacgc ggcgatcgac acgggtttca tcgaacggcg ccttgacgcg
     7081 ctcgttccag atcctgagcc ggatgaagaa atctggcgag gtgcggccac cgtcgcctgg
     7141 ctggcggggg aagccgatgc ggatctgccg ggaccatccg gctttaggtt gaacgcaccg
     7201 acgctcgctc gtgtcgccct cgcctccaac ggcgagttca gggcggtcga ccttgatgga
     7261 cagatgccgg acatctccgg cttcgccgac gttgatcgcg taatcgtctt tcgggaaggc
     7321 cagggctacg gcttcgattt atctgctcgc ggaagcgtcg gagcgcatgg ctcgagcgat
     7381 ggcgtgatca cagcgccgat gccggggaag gtggcttcgg tcgatatttc acaaggtgca
     7441 aacgttagca aaggacaacg tttgctgaca ttggaagcga tgaagatgga gcatgggctt
     7501 accgcgccgt tcgacggtgt ggtcgcggag ctcaatgcga aagagggcgc gcaggtcgtc
     7561 gagggcgccg tcctcgcgcg cgtcgaacca gaggagacga aatgaacatc aacggcattt
     7621 cagcggtcgt caccggggcc gcatcgggcc tcggcgaagc caccgcccgc gagctagcca
     7681 agcgaggcgc caaggtcgcg atcttcgacc gcgaccaaga caagggggag aaggttgcat
     7741 ccgaaatcgg cggcgtgttt tgcgaagttg acgtgacttc cgacgaagcg gtcgccgcgg
     7801 cgttcgagaa agcgcgcgag gcccacgggc aggagcgcgt gctcgtaaat tgcgcaggtg
     7861 tcgccaacgc cgccaagacc gtcggccgcg acaaggagac caaggaaccg cgcttctacc
     7921 cgatggtgca gttcgagctc gccatccaga tcaatctcat cggcaccttc cgctgcatcg
     7981 cgcacagcgc gttcgggatg atgaacctcg acccgctcga ggacggcgag cgcgggtgca
     8041 tcgtcaacac cgcctcggtc gccgcccagg acgggcagat cggccaggtc gcttattcgg
     8101 cttccaaggg cggggtgctg gcgatggcgc tgccgatcgc ccgcgacctg atgaacgacg
     8161 gggtgcgcgt caacacgatc ctccccggcg tgttcaagac tccgatggtg gcgatgatgc
     8221 cgcccaaggt ccaggatgcg ctgggtgagc aggtgccgtt tcccaaacgc ctcggccagc
     8281 cggaggaata tgcgcggctc gcctgcttca tggtcgagaa cccgtacctg aacgcggaag
     8341 cggttcggct ggacggcgga atcagaatgg caccgcgttg atttccgatc ggaagcagct
     8401 tctcgcagac attgcagtcg cagcggccga ggcgggcgag gcaatcctga agatcgtcga
     8461 gggcgggttc gaggtcgaat cgaaggcgga tcaatcaccc gtcactatcg ccgaccgcgc
     8521 cgcagagctg atcatccttg ccgcgctcgc gaaggcggcg ccgggcgtcc ccgtcgtcgc
     8581 cgaggaagag gtcgcggctg gccgcatccc cgacttcagc gacacgtatt tcctggtcga
     8641 cccgctcgac gggacaaagg aatttatccg cggcggagac gattacaccg tcaacatcgg
     8701 gctgatcgcg aacggcactc cgctcctcgg cgccgtcttc gcaccggccc gcgggtcgct
     8761 cttcgccgga atcgtcggcg agggagcttg gatggaagat tcgaaaggcc gccgggcaat
     8821 tcgcacccgc gagcgaggcc aagccatcac cgcagtcgcc tcgaagtccc acttcaacca
     8881 gccgaccgcc gattatctcg caaaggccgt gggcgaatgc gattatgccg cgatcgggtc
     8941 gagcctgaag ttctgtattg tcgccgaggg caaggccgac atctacccgc gccttgcgcc
     9001 gaccagcgaa tgggacaccg ccgccgccca tgccgtcctg ctcgccgccg gcggccaggt
     9061 ggacggcccg gacggggagc cgctcggtta cggcaagcac gccttcctca accgcggctt
     9121 cgtcgccacc gccgggtgga aagcgccgcc gatcggcccg ttcctgcatc ctttctcagg
     9181 cggaggcgac gtcccggagg gcgtctaggg cgtcggttcg gggattggcc cgttccatcc
     9241 cagcgtctcc agccactctg agtcggggag ttctcccgcc cggcggttac tcgtcactcc
     9301 gcgaagggat tcgagctcga tccgggcggc ctcaagccgt ccgtagagct cgcgcgcctc
     9361 cagcgatggg tgatgtcgcg taccgagttg ccaggcgagg cgttgcgcac cctcgatcgc
     9421 gtctgaaagc tgcgcgagcc acgccgcgcg cattgcaatc tgttccattc ggcccccccg
     9481 ggctcgcgac tcgtccactc cccacgaatt cacattacat taaatcaact taggtgcggt
     9541 cggagattgc tccattatgg agccgaaacc gtctgacttt tctccgctat gccggttatc
     9601 taaagtgaat atgctcggtg ccgccagcca aggagtttgg ccatggatgc acttatgacc
     9661 gagacgagtt tttcctacga cggaccgccg ccgttgctaa tcgcggccac cagcgacgcg
     9721 gccatgcgca gagcgagcga gacggccgcg gcatcgggcg ctcgagtcgc tgcgcggctg
     9781 ggcatttcgg aggcacgcga gcggctttcg cagcaggcat ctgcgtcggc gatctggatc
     9841 gaagtggatc gggattgcgg ccgcgaactt gaaggcctgc tcgacgatgt cgatgatcgg
     9901 gtggagcgcc gacgcttcgg cgccgttgtt tcgctgacgt ccgagctaat cgacctgctt
     9961 ggcgatcggc tgttcgatgg ctcgtcgcag ttcgtcgtcg atgcggaccc gatcgagcgc
    10021 gtggcatcgc tcgcgaccgc gactgcgatc gcgaatgcgc cgcagcgggc caatgacgtc
    10081 tcgaaggatc ccggagcgga gcggcttcgc cagctgagcg acgaggtcgg ccggatcgcc
    10141 gcgacgctgg cccggctttc gaccgttccg gccgcaccgg aagccgaatt gcgcaagccc
    10201 gtggaggacg aaattcccga cgtttcggcc gacaccgttc gctcggtaat ccgcgcgcgc
    10261 aggctgcgcg gccgcttctt ttccgaggat ctgttcgccg atcccgcctg ggacatgctt
    10321 ctcgatctgc tccaggccga aatcgcgcag ttgcgggtgc cggtctccag cctgtgcatt
    10381 gccgccgcgg tcccggccac gacggcgctt cgctggctga aaagcatgac cgacaaggga
    10441 ttgttcgtca ggcgggcaga ccctcatgac ggccgccgtg tcttcgtcga gctgtcgcgc
    10501 gacgccagcg ccgcgatgcg ccgctacttc gcggaggtgg gccgcccggc ggtagtctga
    10561 tccgcgtcct gcgcttcggg atggtgggcg gtgacgggct cgaaccgccg accctctcgg
    10621 tgtaaacgag atgctctacc aactgagcta accgcccatg cgattgctgc agtggggatg
    10681 cgccggagcc tcgtcaagaa ggcctagagg cgaatccagc cgagcaggag cagtagcacg
    10741 agcgtaccgg cggcgctgac gagcagcgac agcaggcaac cggcacggtt cgaaaagaac
    10801 aggaacatcg tcgaaaaacg gagaaggcgg ttacaggctc cgaaccagct tcacggccat
    10861 cgccagccac ggcgcattgg tgatgacctg ctggcgcatt ccagcaccga gcgggagcag
    10921 gtgaagcttg ccgctcgact ccccttcgtt cggcgcttcg cggccgatca gccggccgaa
    10981 caggaatcgg ccgccggggc ggggcacgag aacgtcgcga ttgagcgcgc gcccgaattc
    11041 ctccggctga agcgtttcgc accagatttc gtcgccggcg cggtaatcgc cggcgcttgc
    11101 cgaaacggtg accgcgatat cgccggcctt cgggcgcggc gggacgacga tcgcggtccg
    11161 cttcggggca ttcgcgccat ttgcgctgac gatcgccgcg accggaacgt ccatcttctc
    11221 cccgccgctt tcgaccaggt ccgcggcatc gacctcgaga gcgttcgcga tccgattgag
    11281 ccaaccaacg gacacggtcc ggctcccggt ttcgaggcgt ccgatcgttt gcggagtcgt
    11341 gggcgggacg catgcgcgcg cgacctcgtc caacgtcatt ccacgcgccc ggcgcacctc
    11401 gcgaatccta gtaatcacac cccgtccccc taaccaattc ggtttctctc tgtcctacag
    11461 ttttgcccat gtggcaagag gtgggcgaat cggatgaacg aggagcaaca aatggcgcgg
    11521 attgagaacg gacgaatgct ggtggagcgg gcgatcgggc gggacggcga gactttaagg
    11581 ggtgcgggcc ggcgtggcgt tcggtcggtg accgtcaatg ccgccgaatc cccgctcggc
    11641 tggctgttcg cgcgcgggct ggtcactcgc cgtcagttcg atgccggcga gcacctgcgg
    11701 tcggactggc agcgcggcgg cctgtccgcg agaatcacga tgcagtggga tgccgccccg
    11761 gtcgggcgcc agcggggcgg cgcgggcgga gcgcccgacc tcgccgcggc ccaaatcgac
    11821 gccaggcggc gtttcgagcg agccgtcgag gcggccgggc cgggcctgtc ggatatcttg
    11881 tggcgggtgg tctgctcggg cgaaggcatg cgcgaagccg agaccgcgct cggctggccg
    11941 gcgcgcgccg ggaaggtcgt ccttgccctg gcccttgatc ggatcgccga cttctaccga
    12001 attcgctagc gatcctcgcc cttcgttccg gtcttccggg cgttcgagcc catgcccgtg
    12061 gtgcgctgcc cgcggttgtc ctcaatctct cccttgttgg cgtcccggtc gagcaccgcg
    12121 gtgccgctct tgccgcgctc gcgctcgtgc cccttgaccg tcggatcgag gaagcgatcg
    12181 cgactctcgt ccttgccgct gttcctgcgc atctgttcgt ctcctaactg ggccggcggt
    12241 cgtcggctcg gggattgccg gtctgtggcg cctggggctt gccgccgtcg gccgaattgg
    12301 ccccggcctg gtcgccgcca tgcgccgcct ggccctgctt gccgcgcttc gattgcggct
    12361 cctcttcaag cacgtcctcg agatcgcgcc ttgagtccga attactgcta atgctgttca
    12421 tcgcttgctc ccgttcgtgg ggaaccaacg gacgggcggg cgcaggtatc cgctgctcga
    12481 gaaggatttg gctgatgatt ctctacggct cgtcgctgtc gccctatgtc cgcaaggtga
    12541 tcgcttatgg ctcggagaag gggatcgagt tcgatatcca gccggtcggc cccggcgatc
    12601 ccaaccccga attccgcaag gcgagcccgt tcggaaagat gccggggctc gccgacggcg
    12661 actattatct cgccgattcc agcgcgatca tccattatct ggaggcgaaa catactgagc
    12721 cggcattgat tccaagcgac ccggagcttc gcggcaagtg catctggttc gaggaattcg
    12781 ccgacacgat cctcgccggt tgcggggcca agatgttctt caaccgggtg gtcgcgccgc
    12841 tgttcctgaa gcgccagggc gatctcgccg tagccgacgc tgccgagcgg gaggagcttc
    12901 ccaaggtgct tgattatatc gaaagcgttg ccccggacgg ggagggctat ctggttggcg
    12961 acacgctcac gctggccgat atcgccgtcg ccggcccatt tgcgaacctg cagcatctca
    13021 aggtcgagat tgacccggcc cgctggccca agacggtcgg cttcacgaag cggatcctga
    13081 tgcggccgag tttcgcgccc ttagtggccc gcgaaagcgc cttcctggcg aaggtcgccg
    13141 cctaaagaat acgccgcgcc ccatgcggag ggcgcggcgc cttggtaatt ggcgggagcg
    13201 actattgttc gctgctgcct tcgatgtcgc tcgagcggct tcggtcgcgc tcgctgctgc
    13261 cttcgatgtc gctttcgtct tcgcgcgcac cgcggccctg ctcggcgaag cccgcctgct
    13321 cggtcttgcc ttcctgcagg tactcgctcg aatcgctgtc ctgcgaaccg acgaagccgc
    13381 cggtggaacc gccttgggat ccgccctcag ccgagccccg ctcgccggtg cggtcggcga
    13441 cgtcggtctg cgcctcgccc tgctgcccgc cttgtgagtc ctgcgtctgc ccggactgtt
    13501 ggccgaattc gctctgctgc cccgactggc cgcccatgga ctcc
//
LOCUS       DATAKH010000063         5063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20116,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000063 DATAKH010000000
VERSION     DATAKH010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5063
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20116"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VHN55_02340"
     CDS             complement(<1..197)
                     /locus_tag="VHN55_02340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802812.1"
                     /translation="MKRMLYLAAAISLAATAAQAPGQPVDARTMARIDRILKSTPLID
                     GHNDLPWALRENHESRIIDLA"
     gene            275..520
                     /locus_tag="VHN55_02345"
     CDS             275..520
                     /locus_tag="VHN55_02345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802813.1"
                     /translation="MNESAKRDLEEVMDFDPEEGIANLEEHLDRLKAQADDLGYSFDR
                     HGARNELQAATFGKRHPGKARLLLSPSGAIAIELKAA"
     gene            complement(517..1218)
                     /gene="pdeM"
                     /locus_tag="VHN55_02350"
     CDS             complement(517..1218)
                     /gene="pdeM"
                     /locus_tag="VHN55_02350"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019367599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEX2802814.1"
                     /translation="MVPLSFAGETFVPSTAGTLYWPGKQALLVADLHLEKASWFARLG
                     QMLPPYDSHATLTALAQEVERTGARRLYCLGDSFHDRFGCDRLPSASRELLEAMTDRL
                     EWTWIVGNHDPMTQPRRPGDGVGPSFADHCGGTIVEEAEIGGILLRHEARSDEPRPEI
                     SGHFHPKLRVSVNGRRVSRRCFVASERKIILPAFGSLTGGLDVRHPEIIRAVSGNAVA
                     LVPVADRLLRFPIAA"
     gene            complement(1237..1686)
                     /locus_tag="VHN55_02355"
     CDS             complement(1237..1686)
                     /locus_tag="VHN55_02355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802815.1"
                     /translation="MRYFLDTEYNGICGALLSLALVPDDGEELYITLKVGEPLLEWVE
                     THVVPYLDMVPQQLLWPRLARRDAAEAIERYLSHDEEPVIIADWPEDIAQFCNLMITG
                     PGDMIEVRDVTFRLLPLSNFSTAMNSEVPHNALHDARALRDHYRSME"
     gene            complement(1687..1971)
                     /locus_tag="VHN55_02360"
     CDS             complement(1687..1971)
                     /locus_tag="VHN55_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010406998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802816.1"
                     /translation="MKKLALLLLLPLLGGCVAKAVVETAVTAATLPVKATSQAVDLVT
                     TSQSEADEKRGRQLRKADEQRGRELRQMAARCQKGKPLPGDTCTTTAQPR"
     gene            complement(2013..4427)
                     /locus_tag="VHN55_02365"
     CDS             complement(2013..4427)
                     /locus_tag="VHN55_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HEX2802817.1"
                     /translation="MTSARLPPVVNDWFESKGWRPRRHQLEMLEVARRGRHALLVAAT
                     GSGKTLAGFLPSICDLIEAPADTLHTLYVSPLKALGVDVQRNLLGPISEMGLDIRVET
                     RSGDTPSDRKARQRVRPPQILLTTPESLSLLLSYPESATLFANLKTVVVDELHAFARE
                     KRGDLLALSIARLQALSPGLRRVGLSATIADPDAYRSWLAPGADEARVDLVIGDPGAE
                     PELSILIPENRIPWSGHSGRHAAREVMELIERHNTTLVFCNTRSLAELIFQDLWAVND
                     EALPIGIHHGSLAQEARRKVEAAMASGRLRGLVATASLDLGIDWGDIDLVIQMGAPKG
                     SSRLLQRIGRANHRLDEPSLGMIVPGNRFEYLEARAALDAIDDGELDPESFRPGTLDV
                     LAQHILGVACAERFDPGQLLAEIRSAAPYADLNPDTFEEVLGFIATGGYALKAYDRFR
                     RLVRDPDGRWRLAKPAIAQQHRLNAGVIVEQPLLTVRFRNGRKLGTIEEGYASTLAPG
                     DHFYFSGLSLEVEQFKDTDIIVHASKKPARIVTYGGQRMSMSTHLANRVRHMLADRND
                     WRRFPDDVRDWLEVQDRRSRIPEPNELLVETFEHEKLHYMVAYSFEGWNAHQSLGMLI
                     TRRMESAGLKPTGFVANDYGLACYGLEPVRDPKALFSPDILEREFVDWVENSYLLKTA
                     FREVAVIGGLVERQHPGRRKTGRQVSFSTDLIYDVLRRYEPQHLLLRAAWEDARARMT
                     ELGRLVRLVDRAAATMVHVEADRITPMAVPLMVIVGREALPPGAEADETLLVQAEQLA
                     DAAMEL"
     gene            complement(4424..4603)
                     /locus_tag="VHN55_02370"
     CDS             complement(4424..4603)
                     /locus_tag="VHN55_02370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802818.1"
                     /translation="MADFWWWVMDIVLPVVLLIALVWLVFLRRSKGTDRTTYEGTKDE
                     YADEEKRRREGTDGL"
     gene            4659..>5063
                     /locus_tag="VHN55_02375"
     CDS             4659..>5063
                     /locus_tag="VHN55_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010406585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase-associated DEXH box helicase"
                     /protein_id="HEX2802819.1"
                     /translation="MARLGSWIEVFPEGIYVRPADAWVDPSKPKERALITHGHGDHAR
                     GGHGAVLATPETLAIMALRYGTQNGQPAAYGESVRVGEADVTFVPAGHVLGSAQLVLE
                     HKGEKIVVSGDYKRREDPTCHEFVPVPCDVFIT"
BASE COUNT          857 a         1589 c         1739 g          878 t
ORIGIN      
        1 ctcgccaggt cgatgatcct gctctcgtga ttttcgcgga gagcccacgg caaatcattg
       61 tgcccgtcga ttagcggcgt gctcttcagg atgcggtcga tccgcgccat cgtccgggcg
      121 tcgaccggct ggcccggggc ctgggctgcg gttgcggcga gggaaatcgc ggcggcgaga
      181 taaagcatcc gtttcatggc cgcgggttta aaggagtggg cgaagggcgc aaatgggctt
      241 gtctccgcca gccccggcag cgatggtggc ggcaatgaat gaatctgcca agcgcgacct
      301 cgaggaagtg atggatttcg accccgagga agggatcgcc aacctagaag aacacctcga
      361 ccggttgaag gcgcaggccg acgatctcgg ctacagtttc gaccggcacg gtgcccgtaa
      421 cgaactccag gcggccacgt tcggcaagcg gcaccccggg aaggcgcggc tactgctcag
      481 cccgagcggc gcgatcgcga tcgaactcaa ggccgcctag gcagcaatcg gaaagcggag
      541 caggcggtcg gcgaccggga ccagcgcaac cgcattgccg ctgacggcgc ggatgatctc
      601 cgggtggcgg acgtcgaggc cgccggtcag cgagccgaag gccggaagga tgattttccg
      661 ttccgaggcg acgaagcagc ggcgcgacac tcggcggccg ttcacgctca cgcgcagctt
      721 cggatggaaa tggccggaga tttccggtct cggctcgtcg ctccgcgctt catggcgaag
      781 caggatcccg ccaatttcag cctcttcgac gatggtgccg ccgcaatggt cggcgaatga
      841 cggtcctacg ccgtcccccg gacggcgcgg ctgcgtcatt ggatcgtggt tgcccacgat
      901 ccaggtccat tccagcctgt ccgtcattgc ctcgagaagc tcgcgcgaag cggagggcaa
      961 tcggtcgcag ccgaatcgat cgtggaaact gtcgccgagg caatagaggc gccttgcgcc
     1021 ggttcgctcc acttcctgcg caagcgcggt gagagtcgcg tgcgaatcgt agggcggcag
     1081 catctgtcca agccgcgcga accagctggc cttttcgagg tgcaggtcgg cgacgaggag
     1141 tgcctgcttg ccaggccagt aaagcgtgcc ggctgttgac gggacgaacg tttcgccggc
     1201 gaacgaaagg ggaaccatgg gcccagcttt agaatgctat tccatgctcc gatagtggtc
     1261 gcgaagagcg cgcgcgtcgt gaagcgcgtt gtgcggcacc tcgctgttca tcgcggtgct
     1321 gaaattgctc agcggaagca gccggaaagt cacgtcgcgg acctcgatca tgtcgcctgg
     1381 accggtgatc atcaggttgc agaactgggc gatgtcctcg ggccagtcgg cgatgatgac
     1441 gggctcctcg tcgtggctca gatagcgttc gatggcctcc gcggcgtcgc ggcgggcgag
     1501 gcgtggccac aaaagctgtt gcgggaccat gtcgagatag gggacgacat gcgtttcgac
     1561 ccattcgagc agcggctctc cgaccttcag cgtgatgtag agttcttcgc cgtcgtcagg
     1621 gaccagggca aggctgagca gcgctccgca aatgccgtta tattccgtgt cgaggaaata
     1681 gcgcacctat ctcggctgcg ctgtcgtcgt gcaggtgtcg cccgggagcg gcttcccctt
     1741 ctggcagcgc gccgccatct ggcgaagctc gcgcccccgc tgttcgtcgg ccttgcgaag
     1801 ctggcggccg cgcttttcgt ccgcctcgga ctggctggtg gtcaccaggt cgacagcctg
     1861 cgacgtcgcc ttcaccggca gagtcgctgc agtcacggcg gtttcgacca cggcctttgc
     1921 gacgcagccg ccgagcagcg gcagcaggag gaggagagcc aactttttca ttgtccttga
     1981 atcgcagatg attggccgcg ccgcaatcgc aatcacagct ccattgcggc atcggcgagc
     2041 tgttcggcct gcaccagcag cgtttcgtcg gcctcggcgc ccggcggcag cgcttcgcgg
     2101 ccgacgatga ccatcagcgg caccgccatc ggcgtgatgc ggtcagcctc gacatggacc
     2161 atcgtcgccg ccgcccggtc gacgaggcgc acaaggcgcc cgagctcggt catccgcgcc
     2221 cgggcgtcct cccaggcggc gcgaaggagc aaatgctgcg gctcgtagcg gcggagcacg
     2281 tcgtagatga ggtcggtgga gaagctgacc tggcggccgg tctttcggcg ccccggatgc
     2341 tggcgctcga cgagcccgcc gatcaccgca acttcgcgga aggcggtctt gagcaaatag
     2401 ctgttctcca cccagtcgac gaactcgcgc tcgaggatgt cgggcgagaa caaggctttc
     2461 ggatcgcgga ccggctccag cccgtagcag gcgaggccgt agtcgttggc gacgaagccg
     2521 gtcggcttga gcccggcgct ttccattcgg cgggtgatca gcatgcccag cgactgatgc
     2581 gcgttccagc cctcgaagct gtaggcgacc atataatgga gcttctcgtg ctcgaaggtc
     2641 tcgacgagaa gctcgttggg ctcgggaatt cgcgagcgcc ggtcctgcac ctccagccag
     2701 tcgcgaacgt cgtcggggaa gcggcgccag tcgttgcggt cggcgagcat gtggcggacg
     2761 cggttggcga ggtgagtcga catgctcatc cgctggccgc cgtaagtgac gatccgcgcc
     2821 ggcttcttcg acgcatggac gatgatgtcg gtgtccttga actgctcgac ctcgaggctg
     2881 agaccggaga aatagaaatg gtcgcccggc gccagcgtcg aggcatagcc ctcctcgatc
     2941 gttccgagct tgcggccgtt gcggaagcgg accgtgagca acggctgctc gactataacg
     3001 ccggcgttta gccggtgctg ctgggcgatc gccggcttgg ccagccgcca gcgcccatcg
     3061 ggatcgcgga ccaaacgccg gaagcggtcg taggccttga gcgcatagcc gccggtagcg
     3121 atgaaaccga gcacctcctc gaacgtgtcg ggattcaaat cggcgtaggg ggctgccgaa
     3181 cggatttcgg caagcaattg cccgggatcg aatcgttcgg cgcaggccac tcccaggatg
     3241 tgctgggcga gcacgtcgag cgtgccgggg cggaagcttt ccggatcgag ctcgccatcg
     3301 tcgatggcgt cgagcgcggc ccgcgcctcc agatactcga agcggttgcc gggaacgatc
     3361 atgcccagcg aaggctcgtc gagccggtgg ttggcacggc cgatccgctg gaggaggcgc
     3421 gagctgccct tgggcgcccc catctggatg acgaggtcga tgtcgcccca gtcgattccg
     3481 aggtcgaggc tggcggtggc gaccagtccg cggagcctgc ccgaggccat tgccgcttcg
     3541 acctttcggc gcgcttcctg ggcgagactc ccgtgatgga tcccgatcgg aagcgcctcg
     3601 tcgttcaccg cccaaaggtc ctggaagatc agctcggcga ggctccgggt attgcagaag
     3661 acgagggtgg tgttgtggcg ctcgatcagc tccatcacct cgcgcgcggc gtggcggccg
     3721 gagtggcccg accagggaat ccggttctcg gggatcagga tcgacagctc cggctcggct
     3781 ccgggatcgc cgatgaccag gtcgactcgc gcttcatcgg cgcccggtgc aagccaggac
     3841 cggtaagcat cggggtccgc gatcgtcgcc gacaggccga ctcggcggag gccgggactg
     3901 agcgcctgaa gccgtgcgat cgacagcgcc agcaggtcgc cgcgtttctc gcgggcaaag
     3961 gcgtggagct cgtcgacgac gaccgtcttc aggttggcga agagggtcgc gctctcggga
     4021 tagctgagca ggaggctcag cgattcgggc gtcgtcagca ggatttgcgg cggccgcacc
     4081 cgctggcgag ccttgcggtc ggacggcgtg tcgccgctgc gggtctcgac ccggatgtcg
     4141 agtcccattt cggatatcgg tccgaggagg ttgcgctgga cgtcgacgcc gagcgccttg
     4201 agcggcgaca cgtatagcgt gtggagcgtg tcggccgggg cctcgatcag gtcgcagatc
     4261 gatgggagga agcccgccag ggtctttccg gacccggtcg cggcgacgag caaggcgtgg
     4321 cgcccacgcc tcgccacctc aagcatttcc agctggtgcc ggcgcggccg ccagcctttg
     4381 gattcaaacc agtcgttaac gactggcgga aggcgcgcgc tcgtcagagg ccgtcggtcc
     4441 cctcgcggcg acgcttctcc tcgtctgcat attcgtcctt cgtcccttca taggtcgttc
     4501 ggtcggtgcc cttcgatcgg cgaaggaaga cgagccaaac cagggcgatc agcagcacga
     4561 ccggaagaac gatgtccatc acccaccacc aaaaatcggc cattcgctca tctccttgcc
     4621 gttggaaccg gcgctccttg ccatcactat agctcgtaat ggcgcgtttg ggttcctgga
     4681 tcgaggtctt tcccgagggc atttatgtgc gcccggcgga cgcctgggtc gatccgtcga
     4741 agccgaaaga gcgggcgctg atcacgcacg gccatggcga ccatgcccgc ggcggccacg
     4801 gtgcggtgct tgcgactccg gagacgctgg cgatcatggc gttgcgctac gggacacaga
     4861 acgggcagcc cgctgcttac ggcgaaagcg ttcgagtagg agaggccgac gtcactttcg
     4921 tccccgccgg ccacgtgctc ggaagcgcgc aactcgtcct ggagcacaag ggcgaaaaga
     4981 tcgtcgtgtc gggtgactac aagcgccgcg aagacccgac atgccacgag ttcgtgccgg
     5041 tcccctgcga tgtcttcatc act
//
LOCUS       DATAKH010000064         4913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36369,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000064 DATAKH010000000
VERSION     DATAKH010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4913
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36369"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1044
                     /locus_tag="VHN55_02380"
     CDS             <1..1044
                     /locus_tag="VHN55_02380"
                     /inference="COORDINATES: protein motif:HMM:NF044955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802820.1"
                     /translation="IAEMEADNRSFAAALVDMGVRGHIRIVEEDGGWLSSDTRTIERL
                     TSSAVLPADEEAALSKLLATGETIEMKQANHSKFSSAKKALEDYLKEMFEGKMFHRNT
                     GWAFAGVAVFIAALWLSAAAVSLSSGIASIFAVGAAVGAILTTVLLLLLLDNVGSVGK
                     CLLVGAAFVAGFAALALGAPLFLGALSTGWLFPLLLPVLALPLVVSGFWWMSAPTAQG
                     RAVLDRIAGFKQYLSITERERLDRMTPPDDTPELFERFLPYAIALGVENRWAERFAGV
                     LAAAAAQGQQGFAWYSGSHSPWSDADGFTRSVGSSLASSVSSASTAPGSSSGSGGGGS
                     SGGGGGGGGGGGW"
     gene            complement(1047..1622)
                     /locus_tag="VHN55_02385"
     CDS             complement(1047..1622)
                     /locus_tag="VHN55_02385"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2802821.1"
                     /translation="MNARSLSGGQASTSLLVCEAPRIETERLVLRPWRKDDFRPWHAI
                     LSHPEVFRHLGAQPVSAEDCWRRLMGAVGCWQLNGFGGWAVELKSDSSLIGTVGIFTA
                     WRDLEPEFGEEPEMGWIFAPATHGHGIASEACRAALLWIEANLDPTPIWAIVAPANEP
                     SLRLAGKLGFERVGDTTYNDDPTVVLKRQAW"
     gene            complement(1619..1849)
                     /gene="rpmE"
                     /locus_tag="VHN55_02390"
     CDS             complement(1619..1849)
                     /gene="rpmE"
                     /locus_tag="VHN55_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEX2802822.1"
                     /translation="MKSGTHPDYHMITVEMTDGTKFQTRSTWGKEGDTLHLDIDPTSH
                     PAWTGGNQKLLDTGGQVARFNKRFAGLKLGKQ"
     gene            complement(1945..2502)
                     /locus_tag="VHN55_02395"
     CDS             complement(1945..2502)
                     /locus_tag="VHN55_02395"
                     /inference="COORDINATES: protein motif:HMM:NF042461.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6580 family putative transport protein"
                     /protein_id="HEX2802823.1"
                     /translation="MEKLAPTMDNRMRLLALLVAIFAAAAMRLVPHPPNFSPIAAMAL
                     FSGAYLPRRALAFVAPLAALLLSDLALGFYAGMNFVYFSFALTVLIGWALASRRTPLW
                     VGAAAIASSLLFFVLTNFGMWLFSGFYPRTVEGLAACYVAAIPFFQNTLAGDLFYTAL
                     LFGGFALAERLLPPIRQRQRVRIAG"
     regulatory      2612..2749
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            2845..4716
                     /locus_tag="VHN55_02400"
     CDS             2845..4716
                     /locus_tag="VHN55_02400"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2802824.1"
                     /translation="MLIPLVLVSAQIVAEPSSEVVVTASRVPQEQSETAASAAVIDGK
                     TIERLGEPLLYSFLRLTPSAAVQTSGPAGSFSEVRIRGAEANHTLLFIDGIRANDPAA
                     NDTPRFELLNSDMASRMEIVRGPQSALWGSDAIGGVIAVSGLEPERTAFSAAAEAGSF
                     GFGRASGTAALASSKANLAGAIGWQRATGIDSFSGDGDRDGFRNLSARVRGSWRFAPE
                     AELGVAGFSLSGRSEFDGFNPLTFRHADTLDSTRNRLSAGRVWLSAGNPATGLSGTIA
                     TSLLGSSNRNFLVGEEINRTRGERWTVAGQLQYRFTTGAIDHTAIVALDHDREDFHAR
                     DTIYFGASNQDRHRSHDAVTAEWRAEVAPVVADIAVRRDSFSDFKDAATLRASLLVSV
                     GRGFSLAGSYAEGIAQPTFFDLHGFFPGNFVGNPALKAESSRGFEASLRYRGDRLEAA
                     LTGYRQRLTDEIVDVFDPVTFVSSTVNRAAASHRSGIEAELGWRLAERVRLTAHYAYL
                     HATEPGSTPSTQFREARRPKHSGAIAVDGTEGRLDFGASLAFIGSRNDTDFDVFPAEK
                     VKLKSYWLAGGRLAWNISELVQLHARVSNLFDSSYQDVFGYRTEGRAIHAGIRIGSR"
     gene            complement(4720..>4913)
                     /locus_tag="VHN55_02405"
     CDS             complement(4720..>4913)
                     /locus_tag="VHN55_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabZ"
                     /protein_id="HEX2802825.1"
                     /translation="VYFMAIEGAKFRAPVEPGVLLRLEVEFVQKRTSVCKFAGRAMIE
                     GKVAAEANFTAMIADPPAR"
BASE COUNT          867 a         1577 c         1600 g          869 t
ORIGIN      
        1 atagccgaga tggaggcgga caaccgctcg tttgctgcgg cattggtcga catgggtgtc
       61 cgcggccata tccgaattgt cgaggaggac ggcggctggc tgtcgagcga cacccgaacc
      121 atcgagcgac taacgagttc ggcagtgctt ccagcggatg aagaagcggc cctgtccaag
      181 ctgctcgcga ccggcgaaac gatcgagatg aagcaggcta accactccaa attctcgtct
      241 gcgaagaaag cgctggaaga ctatcttaag gagatgtttg aagggaagat gttccaccgc
      301 aacaccggct gggcgttcgc tggcgtggcc gtctttattg ccgcgctctg gctgtcggcc
      361 gcggcggttt cgctgtcgtc gggaattgca tcgatattcg cggttggagc ggccgtcggg
      421 gcaatcctta ctacggtctt gttgttgctg ctcctcgaca atgtcgggtc ggtcggcaaa
      481 tgcctgctgg tgggtgccgc cttcgtggcc ggatttgcag cgctcgcgct tggcgcgccg
      541 ctgttcctgg gagcactgag cactggttgg ctgttccctc tcctgctgcc ggtgctggcg
      601 ctgccgctag tcgtctccgg cttttggtgg atgtcggcgc cgaccgcgca aggacgcgcg
      661 gttctcgacc ggatcgccgg cttcaaacaa tatctgtcga tcaccgagcg cgagcggctg
      721 gaccggatga ccccgcccga cgacacgccc gagctgttcg aacgcttttt gccctatgcg
      781 atcgcgttgg gagtcgagaa ccgttgggcg gagcggttcg ccggagtcct cgccgccgcc
      841 gcggcccagg gccagcaggg attcgcctgg tattccggat cgcacagccc gtggagtgat
      901 gccgacggct tcactcgaag cgtcggttcc tcgctagcaa gcagcgtcag ctcagcctcg
      961 accgcgcccg gctcgagcag cggctcgggc gggggcggat cgtcaggcgg gggtggaggc
     1021 ggaggcggag gcggcggctg gtagagtcac cacgcctggc gcttcagaac cacggtagga
     1081 tcgtcgttgt aggtcgtgtc gccgacgcgc tcgaagccga gtttcccggc cagccttagc
     1141 gacggctcgt tggccggagc gacgatcgcc cagattgggg tcgggtcgag gttggcttcg
     1201 atccacagca gggctgcccg gcacgcctcc gacgcgatgc cgtgcccgtg cgtcgcaggc
     1261 gcgaagatcc agcccatttc aggctcttcc ccgaactccg gctccaggtc ccgccaggcg
     1321 gtgaagatcc cgacggtgcc gatcagcgaa gagtcgctct tgagctctac agcccagccg
     1381 ccgaacccat tcagttgcca gcaacccaca gcgcccataa gccgccgcca gcagtcctcg
     1441 gcgctgacgg gttgcgcccc gagatgccga aacacctccg gatggcttag aatcgcgtgc
     1501 catggtcgga aatcgtcctt gcgccacgga cgcaggacca ggcgttcggt ttcgatccgc
     1561 ggcgcttcgc agaccaaaag tgacgtactc gcttgtcccc cggacaagct gcgtgcgttc
     1621 actgcttgcc gagcttgagg ccggcgaagc gcttgttgaa gcgggcgacc tgaccgcccg
     1681 tgtcgagcag cttctggttg ccgccggtcc atgccggatg agacgtcggg tcgatgtcga
     1741 ggtgaagggt gtccccttct ttgccccagg tcgagcgggt ctggaacttg gtgccatcgg
     1801 tcatctcgac cgtgatcatg tgatagtcag ggtgggtacc ggatttcatt tctaagtcct
     1861 tcgagattgg ctggtttccg accagccgga aaggtcgtgc ggccccttat atggtgacgc
     1921 cccgacttgc aaccaaagta gcggtcagcc cgcgatacgg acccgctgtc gctgccggat
     1981 cggtggaagc aagcgctccg caagggcaaa gccgccgaac agaagcgccg tgtagaagag
     2041 atcccccgcg agcgtgttct ggaagaacgg gattgcagcc acgtagcagg ccgccagccc
     2101 ttcgacggtg cgcggataaa agccgctgaa cagccacatt ccgaaattcg tcaggacgaa
     2161 gaacagcagc gagctcgcga tcgcggctgc gccgacccaa agcggcgtcc gccgcgacgc
     2221 cagggcccag ccgatcagca ccgtgagcgc aaagctgaaa tagacaaaat tcattcccgc
     2281 gtagaagcct agcgcgagat cgctcagcag gagcgctgcc aagggggcga cgaacgccag
     2341 cgcccgcctc ggcaaatagg ctccgctgaa cagcgccatt gccgcgatcg gcgagaaatt
     2401 gggcggatgc gggactaacc gcatcgcggc ggcggcgaaa attgcgacga gcagcgccag
     2461 caggcgcatc ctgttgtcca ttgtcggggc cagcttttcc atatgcaggc tcataaccct
     2521 gccgctgctc gattgacaat cgtcgccggg ccgacgtagc caatcggccg acgagggtgc
     2581 cgcccacgga tagcaaccgg tcgaatcgtg cctcgcacgg ttttgctgcg gctgcttccg
     2641 gcgggggcgg ttgaaaggga agccggtgca attccggcgc tgtgcccgca actgtgaagc
     2701 cgcgatgccg cggccaagtc aggaacctgc cccgtcagtc gtccgcaccc ggccgggtcc
     2761 agccgaagtg cgtgggaccg cgcggggcca gtccgccggc acctccgaga cgacatgccg
     2821 caatgtcgtt caaggagggc ttaaatgctg attccgttgg tgctcgtttc cgcccagata
     2881 gttgcagaac cgtcgagcga ggtcgtcgtg acagcgtcga gggttccgca ggaacagtcg
     2941 gagacggcag caagcgctgc cgtaatcgac ggcaagacga tcgaacgcct cggcgagccc
     3001 ctgctctact cgttcctccg cctgacaccg tccgcggccg tgcaaaccag cggaccggcg
     3061 ggaagctttt cggaagtccg catccgcggg gccgaggcca accacacctt gctgttcatc
     3121 gatggcatcc gcgccaacga tcccgctgca aatgacacac cgaggttcga gcttctcaac
     3181 tccgacatgg cctcgcgcat ggagatcgtc cgcgggccgc agtccgcgct gtggggctcc
     3241 gacgccatcg gcggagtgat cgcagtgagc ggcctcgagc ccgagagaac cgccttctcg
     3301 gcggccgcgg aagcgggatc cttcggcttc ggccgggcca gcgggacggc agctttggcg
     3361 tcctcgaagg ccaatctcgc cggcgcgatc ggatggcagc gggcgaccgg catcgacagc
     3421 ttcagcggcg acggagacag ggacggattc cgaaacctgt cggcgcgagt tcgcgggagc
     3481 tggcggttcg caccggaagc ggagctcggg gttgcgggct tttccctcag cggccgaagc
     3541 gagttcgacg gcttcaatcc cctcaccttt cgccatgccg atactttgga cagcaccaga
     3601 aatcgcctgt cggcggggcg ggtgtggctg tcggccggta atcccgccac cgggctcagc
     3661 ggcacgatcg ccacctcgct gctcggctcc tcgaaccgca acttccttgt cggcgaggag
     3721 ataaaccgta cccgcggcga gcggtggacc gtagccggac agctccaata ccgctttacg
     3781 acaggcgcga tcgatcacac cgccatcgtg gcgctcgacc acgaccgcga ggacttccac
     3841 gcgcgcgaca cgatctattt cggagcgagc aaccaggacc ggcaccgttc gcacgacgcc
     3901 gtaactgccg aatggcgggc cgaagttgcg cctgtagtcg ccgacatagc cgtgcggcgc
     3961 gactccttca gcgacttcaa ggacgctgcc actttgcgcg cgtcgctgct cgtcagcgtc
     4021 gggcgcggct tttctctcgc cgggtcttat gcggaaggca ttgcgcaacc gaccttcttc
     4081 gacctgcacg gcttctttcc cggcaatttc gtgggcaatc cggcgcttaa ggcggagagt
     4141 tcccgcggat tcgaagcgtc gttgcgctac cgcggcgacc gtttggaggc tgctctcacg
     4201 ggctacaggc aacggctgac tgacgaaatc gtcgacgttt tcgatccggt cacattcgtt
     4261 tcgagcaccg tcaaccgcgc cgccgcaagc caccgctcgg gaattgaggc ggagctaggt
     4321 tggcgccttg cggagcgcgt ccgcctgacc gcccattacg cctatctcca cgccaccgag
     4381 ccagggtcga ctccatcgac acaatttcgc gaggcccgtc ggccgaagca cagcggcgcg
     4441 atcgctgtcg acgggacgga ggggcggttg gactttggcg catcccttgc cttcatcggc
     4501 tcccgcaacg acacggattt cgacgtcttt ccagccgaga aggttaagct gaagagctat
     4561 tggctcgccg gcggcaggct ggcgtggaac atcagcgaac tggtccagct gcacgcacga
     4621 gtgtcgaacc tgttcgactc atcctaccag gacgttttcg gctaccgcac cgaaggccgg
     4681 gcaatccatg ccgggatacg gattggcagc cgctagggct tatcgagcgg gcggatccgc
     4741 gatcatcgcg gtgaaattgg cttcggctgc gaccttcccc tcgatcatcg cccggccagc
     4801 gaacttgcag acgctggtcc gcttctggac gaactcgacc tcgaggcgaa ggagcactcc
     4861 gggctcgacc ggcgcgcgga acttcgcgcc ctcgatggcc atgaaataga cga
//
LOCUS       DATAKH010000065         4808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_1439,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000065 DATAKH010000000
VERSION     DATAKH010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4808
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1439"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /locus_tag="VHN55_02410"
     CDS             <1..578
                     /locus_tag="VHN55_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020821177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HEX2802826.1"
                     /translation="MLRQQVKKREGRPNMCLADFINPEGEDWIGGFAVGIHGLSAHLA
                     RFKAENDDYSDILLKALADRLAESFAEVLHAEVRNRIWGYADEHLSNAQLIREKYHGI
                     RPAPGYPACPDHSLKPILFEMLGGNPGEVTLTENFAMLPTSAVSGFYFAHRDSQYFGV
                     ARIGRDQLEDYSQRRAVPVEQAERWLRPNLD"
     gene            607..2586
                     /locus_tag="VHN55_02415"
     CDS             607..2586
                     /locus_tag="VHN55_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEX2802827.1"
                     /translation="MLRCILLALALLTLPALAQSRAIDPQLVAEGPAPAGGEVELAIV
                     MHTKPGWHGYWLNPGDAGLPMKVHWELPRGWSAGPLRYPVPTRLTIAGLMNYVYERDY
                     AVLVRLKAPPGANATVPIRAEAQWLACTDKICVPESGSLSLSLPIGRGTPNRGQFDEW
                     RRALPRPLASVAQFQAAGDKLRLAIPLPRDVKVERPYIFPATDGPVDYAGKQRFSRKD
                     DLLIAELPRRRGNPEQLAGVLALGDGRGLEFEASPGSVPEAGSPLVDLGTNALLWAVL
                     GAIAGGILLNLMPCVFPILALKALHLARSGGEARHARRDALAYASGAVIGTGALGVAL
                     VAIRAGGSAAGWAFQLQDPRTIMLLLLLATAITANLVGLFQLPAVAGEARPAGSFGTG
                     ALAAFVATPCAGPFLGAALGTALLLPLAGSVAVFAALGLGLALPFLAVAFIPPLRKAL
                     PAPGPWMGRLQRFLAIPMAATAVAALWLLHREAGQPGLWVGVAAAAILAVALAIVGRS
                     QRKGSSVPLFALLFAALVLAAAIALAPDRGDESRPQVSGAGRWSESAVRRELAQGHPA
                     FVYFTADWCLTCKVNEAAAIDRESVRDVFKAAGVKVLAGDWTGGDPEITRFLESRGRA
                     GVPLYLWYEPGRAEPEELPQVLTPGMLISRARAKR"
     gene            complement(2561..4231)
                     /locus_tag="VHN55_02420"
     CDS             complement(2561..4231)
                     /locus_tag="VHN55_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX2802828.1"
                     /translation="MKTRFLLALTTALLASPAFAGTLIDNANGIQIAPDGKLQRFTGL
                     VIANDGKVVRLLAAGEARPTQDIVIDAQGRTLLPGLIDAHGHVMGLGLGAIQLDLVGT
                     ASLQDLQQRLRSYAAAHPNDPWIVGRGWNQELWPDARFPTAADLDSIVPGRPVVLRRV
                     DGHAVVANSAALKAAGITAATKDPTGGKIERDRQSVPTGLLIDAATDLVDKIIPAPTV
                     AQQDEALANAQRILLGFGVTAAADMGTDFEGWETYRRAGEAGRLQVRIMSYALDVENM
                     RKLAPNGPTDWLYGDRLRMVGVKLYADGALGSRGAWLKQPYADKPDTHGLRFLTDAVL
                     RAKADEAAKAGIQVAVHAIGDAANAQAIGTYEWLNAKYGGDRRWRIEHVQVVDPADIP
                     RIGKAGIIASMQPTHQTSDRLMAEKRLGLDRLAGAYAWQSMLKTGAKLAFGSDFPVES
                     PNPFPGLAAAVSRQDMEGQPPGGWIPSQRLTFEQALTAFTRGAAYAGYAEAKVGALEP
                     GKWADFILIDRDPTAVDPQQLGGTQVLETWVGGKKLWEKTPTALPERG"
     gene            4284..>4808
                     /locus_tag="VHN55_02425"
     CDS             4284..>4808
                     /locus_tag="VHN55_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX2802829.1"
                     /translation="MMKPPTIDDIRAAAKRIEGAVIRTPMLMSPTVSEVIGAEVWLKF
                     ENLQFTSAYKERGALNKLLQLSDEERARGVIAASAGNHSQAVAYHAKRLGIPATIVMP
                     APTPTVKVTQTESHGATVVLHGEMFDDAHAKARELALEKGFVFVHPFDDPQIIAGAGT
                     VALEMLADAPDLDML"
BASE COUNT          775 a         1649 c         1557 g          827 t
ORIGIN      
        1 cgatgctccg ccagcaagtg aagaagcgcg aaggccgccc gaacatgtgc ctagccgact
       61 tcatcaaccc ggaaggcgag gactggatcg gcggtttcgc ggtcggaatc cacggcctct
      121 ccgcccattt ggcccgattc aaggcggaaa acgacgatta ttccgacatc ttgctcaagg
      181 cgcttgccga ccggctcgcc gaaagcttcg ctgaagtcct tcacgccgag gtgcgcaacc
      241 gtatctgggg ctatgccgac gagcatctgt cgaacgccca gctgatccgg gagaaatatc
      301 acggaatccg gcccgcgccc ggctatcccg cctgccccga ccacagcctc aagccaatat
      361 tgttcgagat gcttggcggc aatccgggcg aggtgaccct caccgaaaat ttcgcgatgc
      421 ttccgacctc ggcggtgtcc ggcttctact tcgcccaccg cgacagccaa tatttcgggg
      481 tcgcgcgtat cggccgcgac cagctcgaag actattcgca aaggcgcgcg gtgccggtcg
      541 agcaggccga acgctggctc cggcccaacc tcgactagcc gcccccgaac cactagcgcg
      601 gccttgatgc tccgctgcat tctcctcgca cttgcgcttc tgacattgcc ggcgctcgcc
      661 caatcgcgcg cgatcgatcc gcagcttgtc gccgaaggcc ctgcacccgc tggcggcgag
      721 gtcgagcttg cgattgtcat gcacaccaag ccgggctggc acggatactg gctcaatccc
      781 ggcgatgccg ggcttcccat gaaggtccat tgggaactcc ctcgaggctg gtcggcaggg
      841 ccgcttcgct atcctgtgcc gacccgactg accatcgccg gcctgatgaa ctatgtctac
      901 gagcgcgatt atgccgtgct agtgcgactg aaggcgccgc cgggggccaa cgccacggtc
      961 ccgatccgcg ccgaggcgca atggctcgcc tgcaccgaca agatctgcgt tccggagagt
     1021 gggtccttgt cgctcagcct tcccatcggc aggggcaccc ccaaccgcgg gcaattcgac
     1081 gaatggaggc gcgcgcttcc acgccccctg gcaagtgtcg ctcaatttca ggccgcgggc
     1141 gataagctcc gcctcgccat cccgctcccg cgcgacgtca aggtggagag accgtacata
     1201 tttccggcga ccgatggccc cgtcgactat gcgggaaaac agcgcttcag ccgcaaggat
     1261 gaccttctca tcgccgagct gccgagacgg cggggcaatc ccgaacagct cgcaggcgtt
     1321 ctcgccctcg gcgacgggcg cggcctcgag ttcgaggctt ccccaggcag cgtgcccgaa
     1381 gccggatcgc cgctcgtaga cctcggaaca aacgcgctgc tctgggcggt gctcggcgcg
     1441 atcgcgggcg gaatcctgtt gaacctcatg ccctgcgtgt tcccgatcct tgcgctcaag
     1501 gcgctccacc tcgcccgaag cggcggtgag gcccgccatg cccgccgcga cgccctcgct
     1561 tatgcctcgg gcgctgtgat cggcaccgga gccttgggcg tggccctcgt tgcgatccgc
     1621 gcgggcggaa gcgccgccgg atgggcgttc cagctccagg atccacgcac gatcatgctg
     1681 ctgctcctgc tggcgacggc gatcacggcc aacctggtcg gactgttcca gcttccggcg
     1741 gttgccggcg aagcgcggcc ggcgggaagc ttcggcaccg gcgcactcgc cgccttcgtc
     1801 gcgactccct gtgcgggacc gttcctggga gcagcgctgg ggactgcgct gctgctaccc
     1861 ctggcgggtt cggtggcggt cttcgcggcg ctcgggctgg gattggcgct gcctttcctc
     1921 gccgtcgcct tcattccgcc gcttcgaaaa gccctcccgg cgcccggccc gtggatggga
     1981 cgcctgcagc ggtttcttgc aatcccgatg gcggcgactg cggtcgcggc gctgtggttg
     2041 cttcaccgcg aagccggaca gccaggactg tgggtgggcg tcgcggctgc cgcgatcctc
     2101 gccgtggcgc tggcgatcgt cggacgcagc cagcgcaagg gcagctccgt gccgctgttc
     2161 gccctcctgt tcgctgcact ggtcctcgcc gcggcgatcg cccttgcccc ggacaggggt
     2221 gacgagtccc ggccgcaagt ctcaggcgcc ggaagatgga gcgaatcggc agtgcgacga
     2281 gagcttgccc agggccatcc cgccttcgtc tatttcaccg cagactggtg cctgacctgc
     2341 aaggtcaacg aggccgccgc catcgaccgc gaatccgtgc gcgacgtgtt caaggcggcc
     2401 ggcgtgaagg tgcttgcggg agactggacg ggcggcgatc ccgaaataac ccgtttccta
     2461 gaaagccgcg gccgcgccgg agtgccgctt tacctctggt acgagccggg gagggcggag
     2521 cctgaagaat tgccgcaggt tctcacgccc gggatgctga tcagccgcgc tcgggcaaag
     2581 cggtaggggt cttttcccac agcttctttc cgccgaccca cgtttcaagc acttgcgtgc
     2641 caccgagctg ctgcggatcg accgcagtcg gatcgcggtc gatcaggatg aagtcggccc
     2701 atttgccggg ctcgagggcg ccgaccttgg cctcggcgta acctgcataa gccgcaccgc
     2761 gcgtgaacgc cgtcaacgct tgctcgaaag tgaggcgctg cgacggaatc cagccgccgg
     2821 gcggctggcc ctccatgtcc tggcggctaa cggcggctgc aagaccggga aaggggttgg
     2881 gcgattcgac cggaaagtcg cttccgaacg ccagcttcgc tccggttttc agcatcgact
     2941 gccacgcata ggcgccggca agccggtcca gcccgagccg cttttcggcc atcaaccggt
     3001 cgctggtctg gtgggtcggc tgcatggagg cgatgatccc ggccttgccg atccgcggga
     3061 tatcggcggg atcgaccacc tgcacatgct cgatccgcca gcggcggtcg ccgccgtact
     3121 tggcgttcag ccattcgtag gtgccgatag cctgcgcgtt ggcggcgtcg ccgatcgcat
     3181 ggacggccac ctggatcccc gcctttgcgg cttcgtcggc cttggcccga agcacggcat
     3241 cggtgaggaa gcgaagcccg tgcgtgtcgg gcttgtcggc ataaggctgt ttcagccacg
     3301 ccccgcgcga acccagcgcg ccatcggcgt agagcttgac tccgaccatg cgcagccggt
     3361 cgccgtacag ccaatccgtg ggcccgttcg gcgcaagctt gcgcatgttc tcgacatcga
     3421 gcgcatagct catgatccgc acctgaagcc gccccgcctc gccggcgcgg cgataggtct
     3481 cccacccctc gaagtccgtg cccatgtcgg cggccgcggt gaccccgaag ccgagaagga
     3541 tgcgctgggc gttcgcaagc gcctcatcct gctgagcaac ggttggggcc gggatgatct
     3601 tgtcgacgag atcggttgcg gcatcgatca gcaggcccgt tggaacgctt tgccggtcgc
     3661 gctcgatctt gccgcccgtc ggatccttcg tcgctgcagt gatccccgca gccttgagcg
     3721 ctgcgctgtt cgccacgacc gcgtggccat cgacccggcg aagcaccacc ggccggccgg
     3781 gtacgataga gtcgagatcg gcggcggtcg ggaacctggc gtccggccac agctcctggt
     3841 tccagccgcg ccctacgatc cacggatcat tggggtgcgc ggccgcatag cttcgaaggc
     3901 gctgctgcag gtcctggagc gaagccgtcc cgaccaggtc gagctggatc gcgcccaggc
     3961 cgagccccat cacgtggccg tgagcgtcga tcagcccggg caacaacgtg cggccctgtg
     4021 catcgataac gatatcctgg gtcgggcgcg cttcgcctgc cgcgagcagc cttacgacct
     4081 tgccgtcgtt ggcgatgacg aggccggtaa accgctggag cttaccgtcg ggtgcgatct
     4141 ggattccgtt agcattgtcg atcagcgtgc cggcgaaggc gggcgaggcg agtagcgctg
     4201 tggtaagcgc aaggaggaag cgcgttttca ttacgctgcc atagcattgt cgccgtccat
     4261 gtgaacggct agtcgaaccg ccgatgatga agccgccgac catcgacgac atccgcgccg
     4321 ccgccaagcg gatcgaaggc gccgtcatcc gcactccgat gctgatgagc ccgaccgttt
     4381 ccgaggtgat cggggcggag gtctggctga agttcgaaaa ccttcagttc acctccgcct
     4441 acaaggagcg cggagcgctc aacaaactgc tgcagctgtc cgacgaggag cgcgctcgcg
     4501 gagtgatcgc agcatccgcc ggcaatcact cgcaggccgt agcctatcac gcgaagcggc
     4561 tcggcatccc ggcaacgatc gtgatgccgg ctcccacgcc gacggtgaaa gtaacccaga
     4621 ccgaaagcca cggcgcgacc gtcgttctcc atggcgaaat gttcgacgat gcccacgcca
     4681 aggctcgcga gctggcgctg gagaaggggt tcgtcttcgt ccatccgttc gacgacccgc
     4741 agatcatcgc cggagcgggc acggtggcgc tagaaatgct cgcggatgcc cccgacctcg
     4801 acatgctc
//
LOCUS       DATAKH010000066         2667 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20173,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000066 DATAKH010000000
VERSION     DATAKH010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20173"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VHN55_02430"
     CDS             complement(<1..726)
                     /locus_tag="VHN55_02430"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 43 glycosylhydrolase"
                     /protein_id="HEX2802830.1"
                     /translation="MTDSIPSFEVELADSGDGLTIAVRGGGMTKVYALAGREQGDFLQ
                     FHAELARDFGTRPPEQPVAKSADGDDPPWRPLLTENIHPKILSGYGDPAVIRTPQGYY
                     LVATSNDALDAFPLLHSDDLDQWLHVGFAFAEGKAPEWVAHGLRHGDFWAPEMARVGD
                     EYWLVYTARDRSLVLSIGLARAPSPEGPWADLGRPLLTGGVIDGHLFVDDDGERYLLW
                     KEDRNGIWPRKLAAFLAERPELID"
     gene            complement(782..856)
                     /locus_tag="VHN55_02435"
     tRNA            complement(782..856)
                     /locus_tag="VHN55_02435"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(822..824),aa:Thr,seq:ggt)
     gene            complement(1063..>2667)
                     /locus_tag="VHN55_02440"
     CDS             complement(1063..>2667)
                     /locus_tag="VHN55_02440"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017502559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEX2802831.1"
                     /translation="AMFVDGRYTLQVRSQVDGKHWSYQSVPETSIAEWLKKHAPKGAR
                     IGYDPWLHTRDWVKKAKESLAGRGAELVAVGENPIDKIWRERPEPSKAHLVVQPDEYA
                     GKGAAAKRTEIAEWLEKQDADAAVLSALDSIAWAFNVRGQDVTHTPVALAYAIVNKDG
                     TADLFVAGEKVGPDVRQHLGNGVRLHERHEFEGALSRLGGKAVAVDPERAVAAIFDAL
                     DKAGAKVLPLRDPTVLPKALKNPVEMAGQKAAQVRDGAVIARFLRWIDEEAPSGEVDE
                     LKASDRLEALRRENPELRDLSFDSISGAGPNGAIIHYRSSEKTNRKLESGSLYLIDSG
                     GQYVDGTTDITRTVPIGEPTDEMRDRFTRVLKGHIALATAVFPKGTRGVQLDSFARRP
                     LWEAGLDYGHGTGHGVGSFLAVHEGPQRIAPATSGQSGGDEPLAAGMLLSNEPGYYKT
                     GEYGIRIENLVFVVEKQIEGSEKEMLGFETVTFAPIDRRLIVKEMLSEAELDWLNAYH
                     RQVVEKIGPTLSGADREWLEAACAAI"
BASE COUNT          418 a          898 c          882 g          469 t
ORIGIN      
        1 atcgatcagc tccggtcgct cggcgaggaa ggccgccagc ttgcgcggcc agatcccgtt
       61 cctgtcctcc ttccacaaca ggtagcgctc gccgtcgtcg tcgacgaaca ggtgcccgtc
      121 gatgactccg ccggtcagca gcggccgccc gagatcggcc cacggccctt ccggcgacgg
      181 cgccctggcg aggccgatgc tgaggaccag cgagcggtcg cgcgccgtat agaccagcca
      241 atattcgtcg ccgacgcgag ccatttccgg agcccagaaa tcgccgtggc gaaggccgtg
      301 ggcgacccac tccggcgctt ttccctcggc gaaggcgaag ccgacgtgca gccactggtc
      361 gagatcgtcg gaatggagca gcggaaaggc gtcgagcgcg tcgttggacg tggcgaccag
      421 ataatagcct tggggcgtgc ggatcaccgc cgggtcgcca tatccggaaa ggattttggg
      481 atggatgttt tcggtcagta gcgggcgcca cggcgggtcg tcgccgtcgg ccgacttcgc
      541 caccggctgc tcgggaggcc gggtcccgaa gtcccgcgcg agctccgcat ggaactggag
      601 gaaatcgccc tgctcgcgac cggcgagagc atagactttc gtcattccgc cgccgcgaac
      661 ggcaatggtc aggccatcgc cactgtccgc gagctcgacc tcgaaggagg ggatggagtc
      721 ggtcattcga gtgcgccgat ttccatgctc ggactgcccc cggcagtcct gtgcgtggaa
      781 atggtgctgc cggtgaggat tgaactcacg acctcagcct taccaaggat gcgctctacc
      841 actgagctac ggcagcattt ttcgatgaag gggcggcgct atgggcggtc gcccggcctg
      901 tcaacccgcg cttgccctct ttgcctctcc gccccaatgt aagtgcatgg ccaagcagga
      961 caagtcgcgc gaggaacggc tcgccgaagc gctccgcgag aacctgcgcc gccgcaaggc
     1021 gcaggcccgg aagctcaagc cggaagacaa aaccaggcgc gactagatcg ccgcgcaggc
     1081 ggcctcgagc cactcgcggt cggcgcctga cagcgtcggc ccgatctttt ccaccacctg
     1141 ccggtgatag gcgttaagcc agtcgagctc ggcttcgctc agcatttcct tcacgatcag
     1201 gcggcggtcg atcggggcga aagtgaccgt ctcgaaaccg agcatctcct tttccgaccc
     1261 ctcgatctgc ttttcgacca cgaaaacgag gttctcgatc cggattccgt actcgccggt
     1321 cttgtagtag cccggctcgt tggacagcag cattcccgcc gccagcggtt cgtcgccgcc
     1381 gctctgtccg ctcgtcgcgg gagcgatccg ctgcgggccc tcgtggaccg cgaggaagct
     1441 gccgacgccg tggccggtgc cgtgcccgta atccagtccc gcctcccaca gcggccggcg
     1501 ggcgaagctg tcgagctgga ccccgcgcgt gcccttgggg aagactgcgg tcgcgagcgc
     1561 gatatggccc ttgaggaccc gggtgaagcg gtcgcgcatc tcgtcggtcg gctcgccgat
     1621 cggaaccgtg cgggtgatgt cggtagtgcc gtcgacatac tggccgcccg aatcgatcag
     1681 gtagagcgag ccgctttcga gcttgcggtt ggtcttctcg ctggaacggt agtggatgat
     1741 ggccccgttc ggccccgcgc cggagatgga atcgaacgac aggtcgcgaa gctcgggatt
     1801 ctcgcgccga agcgcctcta gccggtcgga agccttgagc tcgtcgacct cgcctgacgg
     1861 cgcctcttcg tcgatccagc ggaggaagcg ggcgatcact gctccgtcgc gaacctgggc
     1921 cgccttctgc ccggccatct cgaccgggtt cttgagcgcc ttgggaagca ccgtcgggtc
     1981 gcgtagcgga aggactttgg caccggcctt gtcgagcgcg tcgaagatgg ccgcaaccgc
     2041 gcgttcggga tcgacggcga cggccttgcc gccgagcctc gacagcgcgc cttcgaactc
     2101 gtgccgctca tggagccgca cgccgttgcc gagatgctgg cggacatccg gcccgacctt
     2161 ctcgcccgcg acgaacaggt cggcggtgcc atccttgttg acgatcgcat aagccagcgc
     2221 gacgggcgtg tgagtgacgt cctggccgcg cacgttgaag gcccaggcga ttgaatcgag
     2281 cgccgagagc accgcggcgt cggcgtcctg cttctccagc cactcggcga tttcggtgcg
     2341 cttcgcggcc gcgcccttac cggcatattc gtcgggctgg acgacgagat gcgctttcga
     2401 cggctcgggc cgctcgcgcc agatcttgtc gatcgggttt tcgccgaccg ccaccagctc
     2461 ggcgccgcgg ccggcgagcg attccttcgc cttcttcacc cagtcgcggg tgtggagcca
     2521 cgggtcatag ccgatccgcg cgcccttcgg cgcatgcttc ttgagccatt cggcgatgct
     2581 ggtttccgga acagactggt agctccagtg cttgccgtcg acctggctcc ggacctgcag
     2641 cgtatagcgg ccgtcgacga acatcgc
//
LOCUS       DATAKH010000067         1897 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_9127,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000067 DATAKH010000000
VERSION     DATAKH010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9127"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..883
                     /locus_tag="VHN55_02445"
     CDS             98..883
                     /locus_tag="VHN55_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
                     /protein_id="HEX2802832.1"
                     /translation="MVQPHFIVFANEKGGTGKSTTAVHTAVALAAMGSRVAALDLDSR
                     QRTMTRYLENRDATIRRLEKDLPQAQYAVLDNGTSLEAAIGNFSDAEVVVIDTPGRDD
                     PVAREAILKADTLVTPMNDSFVDLDLIGQVHPENFKVTKPSFYAELIWNSRTQRAKAT
                     GKSVDWVVLRNRLQHIDSHNLRRVGAALDELARRVGFRVIPGLGERVIYRELFPKGLT
                     LLDFEQLGEVGIGHITARQELREMVSGLGVPGTEPEQKVAAAG"
     gene            916..>1897
                     /locus_tag="VHN55_02450"
     CDS             916..>1897
                     /locus_tag="VHN55_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEX2802833.1"
                     /translation="MTHSFNPTILREYDVRGIVGKTLTKEDAWALGRSFGSLAADEGA
                     RAIAVGRDGRLHSPELEGALVDGLLETGLNVVRIGVGASPMLYFATEVLDVQGGIQVT
                     GSHNPPEYNGFKMLLNGRSVFGEEIQELGRRSAAGAWSDGSGMAENADVLGAYVERLV
                     QDFRGKGFRVGWDPGNGAGGPAVEKLVEKLPGEHFVIHPEIDGTFPSHHPDPTVEANL
                     ADLKALVRDKHLDMGFAFDGDADRIGAVDSAGRVVWGDQIMMMLAQPVLKELPGSVII
                     SDVKASQILFDRVAELGGNPLMWKTGHSLIKSKMKETGSPLAGEMSGHIFF"
BASE COUNT          356 a          629 c          617 g          295 t
ORIGIN      
        1 tgtcacggac tgtttgcacc gcggattcgc ctccggtaag ctgcgggtcg ggccgcgctt
       61 ctcgacgcgc ggggggtcaa gttcaagggg ggccggaatg gtccagccgc atttcatcgt
      121 attcgccaac gaaaagggcg ggaccggcaa gtccacgacc gcagtccata ccgcagtcgc
      181 gctcgccgcg atggggagcc gtgtggccgc gctcgacctg gacagccggc agcggacgat
      241 gacgcgctat ctcgaaaacc gcgacgcgac gattcgacgg ctcgaaaagg acctcccgca
      301 ggcgcaatat gcggtgctcg acaacggcac ttcgctggag gccgcgatcg gcaacttttc
      361 cgacgccgag gtcgtcgtca tcgacacgcc cgggcgcgac gatccggtcg cccgagaagc
      421 gatcctgaag gccgacacgt tggtaacgcc gatgaacgac agcttcgtcg acctcgacct
      481 catcggccag gttcaccccg aaaatttcaa ggtcaccaag ccgagcttct atgccgagct
      541 gatctggaac agccgcaccc agcgcgccaa ggcaaccggc aagagcgtcg actgggtcgt
      601 ccttcgcaac cgcctccagc acatcgattc gcacaacctt cgccgggtcg gagcggcgct
      661 cgacgagctt gcgcggcggg tcggcttccg ggtcatcccg ggcctcggcg aacgcgtgat
      721 ctaccgcgaa ctgttcccca agggcctaac gctcctcgat ttcgagcagc taggcgaggt
      781 cgggatcggc cacatcaccg cccggcagga gcttcgcgag atggtctccg gcctcggcgt
      841 tcccgggacc gagccggagc agaaggtggc cgcagccggt tgaaccaaat cgcccacgct
      901 gcgtaaggca gcgcgatgac gcacagcttc aaccccacca ttctccgcga atatgacgtc
      961 cgcgggatcg tcggtaagac cctcaccaag gaagacgcct gggcgctcgg ccgaagtttc
     1021 ggctcgcttg cggcggacga aggcgcgagg gcgatcgcgg tcgggcgcga cggccggctt
     1081 cattcccccg agctggaagg agcgcttgtc gacggcctgc tcgaaacggg gctgaacgtc
     1141 gtccggatcg gcgtcggcgc cagccccatg ctttattttg cgaccgaggt tctcgacgtc
     1201 caaggcggta tccaggtcac cgggagccac aacccgccag aatataacgg cttcaagatg
     1261 ctcctcaacg gccgctcggt tttcggcgag gaaatccagg agctcggccg ccgctccgca
     1321 gcgggcgcgt ggagcgacgg aagcggaatg gccgaaaacg cggacgtgct cggcgcctac
     1381 gtcgagcggc tggtgcagga cttccgaggc aagggctttc gtgtcggctg ggacccgggc
     1441 aacggcgccg gcgggccggc ggtcgaaaag ctggtggaga agctacccgg cgagcatttc
     1501 gtcatccacc ccgaaatcga cggcacgttc ccaagccacc accccgatcc gacggtcgag
     1561 gccaaccttg ccgacctcaa ggcgctggtc cgcgacaagc atctcgatat gggcttcgcc
     1621 ttcgacggcg acgccgaccg gatcggcgcg gtcgactccg ccggccgagt ggtctggggc
     1681 gaccagatca tgatgatgct cgcgcaaccg gtgctgaagg aattgcccgg ctcggtcatc
     1741 atctccgacg tcaaggccag ccagatattg ttcgaccggg tcgccgagct cggcggcaat
     1801 ccgctgatgt ggaagacggg ccacagcctc atcaagtcga agatgaagga gaccggctcc
     1861 ccgctcgccg gcgagatgag cggccacatc ttcttca
//
LOCUS       DATAKH010000068         5344 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36399,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000068 DATAKH010000000
VERSION     DATAKH010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5344
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36399"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..941
                     /gene="lptB"
                     /locus_tag="VHN55_02455"
     CDS             186..941
                     /gene="lptB"
                     /locus_tag="VHN55_02455"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007165503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEX2802834.1"
                     /translation="MVRPGEQAATSGVGLEVRSIAKSYDRRAVLHDVSLDVHRGEVVG
                     LLGPNGAGKTTCFYSVMGLVKPDSGRIILDGQDITGLPMYRRAILGLGYLPQETSIFR
                     GLTVEQNILSVLEVSEPDEHVRSERLERLLDEFGLTGLRESAAMALSGGERRRCEIAR
                     ALAANPSIMLLDEPFAGIDPISIADIRELVRELKQRDIGVLITDHNVRETLDIVDRAC
                     IIYDGQVLFQGTPEALVADSEVRRLYLGESFAL"
     gene            953..2395
                     /gene="rpoN"
                     /locus_tag="VHN55_02460"
     CDS             953..2395
                     /gene="rpoN"
                     /locus_tag="VHN55_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEX2802835.1"
                     /translation="MGLGPSIQLRQSQQLVMTPQLTQAIKLLTLSNLELESVIAEEIA
                     KNPLLEVGSSEDSDSAPDPEEASAPLLADELIPGASEDDRPLDYDFTEQALETDSFAD
                     VAVAPASDEGFDFDRLEAVETSLAEHLLAQLHGASGPAALLAEIIVQQLDPNGYLTTA
                     LADIARDSGASLAEAEHALKLVQDLDPPGVGARSLSECLALQARAADRYDPAMARLID
                     NLDLLAKGRMNDLKRICGVDDEDLTDMVGELRAYDPKPGSQYSADSVEQAAPDVFVRR
                     TRNGYSVELNSAALPRLLINRRYYQELRAGPQDKGSTAWLSECLASANWLVRALDQRA
                     RTIVKVVSKIVETQQGFFERGAEALKPLTLRQVADAIEMHESTVSRVTSNKYLLCERG
                     LFELKYFFRSGVASSDGDGEGASAEAVKAAIRDIVDRETEVLSDDAIAALLNQRGFNC
                     ARRTVVKYREAIGIGSSVQRRRQRKIAGIG"
     gene            complement(2392..3156)
                     /locus_tag="VHN55_02465"
     CDS             complement(2392..3156)
                     /locus_tag="VHN55_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX2802836.1"
                     /translation="MTGRTITVASYNMRKAIGTDRRRDPQRVLQVLKEVHADVVALQE
                     ADKRFGGRASAVPHELIDSHGLYKPVPLGVKHKRPLEKARKHAERLLKVDTRNIGWHG
                     NALLVKHDVGILDWAILQLPTLEPRGAVMAELLVDGDRPFRVVGMHLDLSGLWRRRQM
                     RAIFDAVADRPQKMPTILMGDTNEWRIAGGCLKELPPEFRMAPTGPSFHSRHPLASLD
                     RIIVDGDLRIDAAGVHMSPAARRASDHLPIWARLTL"
     gene            complement(3191..>5344)
                     /locus_tag="VHN55_02470"
     CDS             complement(3191..>5344)
                     /locus_tag="VHN55_02470"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019053165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEX2802837.1"
                     /translation="NAYKVSGGLHGVGVSVVNALSEWLELTVWRDGKEHFLRFRNGEA
                     EAPLKVVGKTDKQGTRVTFLPSPETFKITDFDFDRLEHRFRELAFLNSGVRLVLTDER
                     HDEPKSIEMFYEGGIAAFVQYLDRAKTALIPEPIAIHGQRDDIGIDVALEWNDSYYEN
                     VLCFTNNIPQRDGGTHLAAFRGALTRTLNNYSERSGVLKREKISLAGEDMREGLTAIV
                     SVKLPDPKFGSQTKDKLVSSEVRQPLESLMADKLAEWLEENPAHARTIVQKIIDAAAA
                     REAARKAREASRKSVMGVASLPGKLHDCSERDPAKSEMFLVEGDSAGGSAKQGRDSKF
                     QAILPLRGKILNVERARFDRMLSSREIGTIIQALGTGIGREEFNLEKLRYHKIVIMTD
                     ADVDGAHIRTLLLTFFYRQMPELIEAGHLFIAQPPLYKVARGRSEVYLKDDSALDEYL
                     VSVGLDGLILDTTEGPRTGADLKSLVDHARRVRSLMRYAPRKYDWALLQALAINGALK
                     PNLNVHGREQAIAKAAEWLDSLDEEAGWSGEVAEDGGYLLRRLWRGVTDAHVIEKAFL
                     ASAEARKLHGLVAEQADVYRQPSLLRTVKKGTVTEEQKPEPIEGAEPDEQPAEEEADK
                     KGVTVTRPSELLDAVLAAGRKGLSIQRYKGLGEMNAEQLWETTLDPANRSLLRVEVAQ
                     ADVADEIFTRLMGDIVEPRREFIQDNALNVANLDV"
BASE COUNT          893 a         1725 c         1788 g          938 t
ORIGIN      
        1 ggcgatgtgc agctcaaccg cggcggatcg cagatcctcg gatcgcggct ggtgatcgat
       61 ctcaactcgg gccgagccgt aatcgacggt ggaccggccg gggtcgcgca aagcggaggc
      121 cgcgtacgag ggcacttcac cgtccccaag cgcggcaact gacccaggtg aacgacgcca
      181 ccgtcatggt ccggcctggc gagcaggccg caacttcggg cgtcggcctg gaggtgcgtt
      241 cgatcgccaa gtcctacgac cgccgagccg tccttcacga cgtctcgctg gacgtgcatc
      301 gcggtgaagt cgtcgggctg ctcgggccga acggcgccgg caagacgacc tgcttctatt
      361 cggtcatggg gctggtgaag ccggattcgg gccggatcat cctcgacggc caggacatca
      421 ccggcctgcc gatgtaccgc cgcgcgatcc tcggcctcgg ctatcttccg caggaaacgt
      481 cgatcttccg cggcctcacg gtcgagcaga acatcctttc cgtgctcgag gtcagcgaac
      541 cggacgagca tgttcgctcc gagcgtctgg agcggctgct cgacgagttt gggctgaccg
      601 ggcttcggga aagcgccgca atggcgctgt cgggaggcga gcgccgtcgc tgcgagatag
      661 cgcgggcgct tgcagccaat ccgtcgatca tgttgctcga cgagccgttt gccgggatcg
      721 acccgatctc catcgccgat atccgcgagc tcgtccgcga gctgaagcag cgcgacatcg
      781 gcgtgctgat taccgaccat aacgtccgcg agaccctcga catcgtcgac cgggcctgca
      841 tcatctacga tggccaggtg ctgttccagg gcaccccgga agctctggtt gcagacagcg
      901 aggtccggcg cctgtacctt ggcgagagtt tcgctttgta gagagacggt cagtgggcct
      961 cggtccgagt atccaactcc gccaatcgca acagctggtc atgacgcccc agctgacgca
     1021 ggcgataaag cttctgacgc ttagcaacct cgagctcgaa tcggtcatcg ccgaggagat
     1081 cgcgaagaac ccgctgctgg aagtcggttc aagcgaggat tcggactccg cacctgatcc
     1141 cgaagaagcc tcagcgccct tgcttgccga cgagctgatc ccgggcgcga gcgaggatga
     1201 ccggccgctc gactatgatt tcaccgaaca ggcgctggag accgacagct tcgcggacgt
     1261 ggcggtcgct ccggcgtccg acgagggctt cgacttcgac cggctggaag cggtcgaaac
     1321 ttcgcttgcc gaacatttgc tggcgcagct tcacggcgct tcggggccgg ccgcgctgct
     1381 cgccgagatt atcgtccaac agctcgaccc caacggctat ttgaccacgg cgcttgcgga
     1441 catcgcccgc gacagcggcg cttcgcttgc cgaagcggag catgcactga agctggtgca
     1501 ggatctcgac ccgcccggag tcggcgcgcg cagcctgtcg gaatgcctgg cactgcaggc
     1561 cagggcggcc gaccgctacg acccggcaat ggcgaggctg atcgacaatc tcgaccttct
     1621 cgccaagggg cggatgaacg acctgaagcg gatttgcgga gtggacgacg aggacctcac
     1681 cgacatggtc ggcgagcttc gcgcctacga cccgaaaccg ggcagccaat attcggccga
     1741 ttcggttgag caggccgcgc ccgacgtctt cgtccgccga acccgcaatg gttattcggt
     1801 cgagctgaac agcgcggcgc tgccgcggct gctgatcaac cgccgctact accaggaact
     1861 cagggccggc ccgcaggaca agggatcgac ggcgtggctc agcgaatgcc tggcgagcgc
     1921 caactggctg gtccgggcgc tcgaccagcg cgcccgaaca atcgtcaagg tggtcagcaa
     1981 gatcgtcgag actcaacagg ggttcttcga acgcggggcc gaggcgctga agccgctaac
     2041 gctgcgccag gtggcggacg ccatcgagat gcacgaatcg accgtcagcc gggtgacctc
     2101 gaacaaatat ctgctgtgcg agcgcgggct gttcgagctg aaatattttt tccgctcggg
     2161 cgtggcttcg agcgacggcg acggcgaggg ggcgtcggcg gaagcggtga aggccgcgat
     2221 ccgcgacatc gtcgaccgcg agacggaagt gctgagcgac gacgcaattg ccgcccttct
     2281 caaccagaga ggcttcaact gcgcccgccg gacagtggtc aaataccgcg aagcgatcgg
     2341 gatcggctcg tcggtccagc gccggcgcca gcgcaagatc gcggggatcg gctaaagcgt
     2401 cagccgcgcc cagatcggga gatggtccga ggcgcgccgc gccgccgggc tcatgtgcac
     2461 gccggcggca tcgatccgca ggtcgccgtc gacgatgatc cggtccagcg acgccagcgg
     2521 gtggcgcgag tggaagctgg gcccggtcgg cgccatccgg aattccggcg gcagttcctt
     2581 gaggcagccc cccgcgatcc gccattcgtt ggtgtcgccc atcaggatcg tcggcatttt
     2641 ctgcggccgg tcagcgacag cgtcgaagat cgcgcgcatc tgccggcgcc gccacaggcc
     2701 cgacaggtcg agatgcatcc cgaccactcg gaacggccgg tcgccgtcga cgagcagctc
     2761 cgccatcacc gctccgcgcg gctcgagcgt cggcagctgg aggatcgccc agtcgaggat
     2821 cccgacatcg tgcttcacca gaagcgcgtt gccgtgccag ccgatgttgc gggtgtcgac
     2881 cttgagcagc cgttcggcgt gcttgcgcgc tttctcgagc gggcgcttgt gcttcacccc
     2941 gagcggcacc ggcttgtaga gcccgtgcga gtcgatcagt tcatgcggga ccgccgacgc
     3001 acgcccgccg aatcttttgt ccgcctcctg aagcgccacg acgtcggcgt gcacttcctt
     3061 cagcacctgg agcacccgct gcggatcgcg gcggcggtcg gtgccgatcg ccttgcgcat
     3121 attgtagctg gcgacggtga tggtgcggcc ggtcacgaca acggcaaccc agcgaagcta
     3181 ccgcagttcc tcaaacgtcc aagttggcga cgttcagcgc attgtcctgg atgaactcgc
     3241 ggcgcggctc gacgatgtcg cccatcagcc gcgtgaaaat ctcgtcggcg acgtcggcct
     3301 gggcaacctc gacccgaagc agcgagcggt tggcgggatc gagcgtcgtt tcccacagct
     3361 gctcggcatt catttcgccc agccccttgt agcgctggat cgaaaggccc ttgcggccgg
     3421 cggcgaggac cgcatcgaga agctcggacg ggcgggtgac cgtgacgccc ttcttgtccg
     3481 cctcctcttc ggcaggctgc tcgtcgggct cggcgccctc gatcggctcc ggcttctgct
     3541 cctcggtgac tgtgcctttc ttgaccgtcc gaagcagcga cggctgccga tagacatcgg
     3601 cttgctcggc aacgagcccg tgaagcttgc gcgcctcggc ggaggccaag aacgcttttt
     3661 caatgacatg ggcgtcggtg actccgcgcc acaggcggcg aagcagatag ccgccatctt
     3721 cggcgacttc gcccgaccag ccggcttcct cgtcgagcga gtccagccat tcggccgcct
     3781 tggcgatcgc ctgctcgcgg ccatggacat tgagattggg cttgagtgcg ccgttgatcg
     3841 caagcgcctg aagcagggcc cagtcgtact tgcgcggagc gtagcgcatc agcgaccgga
     3901 cccggcgggc gtggtcgacc agagacttca ggtcggcgcc ggttcgcggc ccctcggtgg
     3961 tgtcgagaat cagtccgtcg aggccgacgc tgaccagata ctcgtcgagc gcgctgtcgt
     4021 ccttgagata gacttcagag cggccgcgcg cgaccttgta gagcggcggc tgggcgatga
     4081 agaggtgccc ggcctcaatc agctccggca tctggcggta gaaaaaagtc agcaggagcg
     4141 tccggatgtg agcgccgtcg acgtcggcgt cggtcatgat cacgatcttg tggtagcgaa
     4201 gtttctcgag gttgaattcc tcgcggccga tgccggtgcc gagcgcctgg atgatggtgc
     4261 cgatctcgcg gctcgacagc atgcggtcga agcgcgcacg ctcgacgttg aggatcttgc
     4321 cgcgcaacgg caagatcgcc tggaacttgc tgtcgcggcc ctgcttcgcc gagccgccgg
     4381 cactgtcgcc ctcgaccagg aacatctccg acttggccgg gtcgcgttcc gagcagtcgt
     4441 gcagcttgcc gggaagcgag gcgaccccca tcaccgactt gcggctagcc tcgcgcgcct
     4501 ttcgggccgc ctcgcgagcg gctgcggcgt cgatgatctt ctggacgatt gttcgcgcgt
     4561 gcgccggatt ttcctcgagc cattcggcga gcttgtcggc catcaggctt tcgagcggct
     4621 ggcggacttc ggagctgacc agcttgtcct tggtctgact cccgaacttg gggtcgggaa
     4681 gcttgaccga gacgatcgcg gtcagcccct cgcgcatgtc ctcgccggcg agcgaaatct
     4741 tctcgcgctt gaggacgccc gagcgctcag aataattgtt cagagttcgg gtcagcgcgc
     4801 cgcggaaggc ggcgaggtgg gtgccgccgt cacgctgcgg gatgttgttg gtgaagcaca
     4861 ggacgttttc gtaataagag tcattccatt ccagtgcgac gtcgatcccg atgtcgtcgc
     4921 gctggccgtg gattgcgatc ggctccggga tcagcgcggt cttggcgcgg tccagatact
     4981 gaacgaaggc ggcgatcccg ccctcgtaga acatctcgat gctcttgggc tcgtcgtggc
     5041 gctcgtcggt caggaccagc cgcacgcccg agttgaggaa ggcgagctcg cggaagcggt
     5101 gctcgagccg gtcgaaatcg aaatcggtga tcttgaaggt ctcggggctg ggcaggaagg
     5161 tgacccttgt gccctgcttg tcggttttgc cgacgacctt cagcggcgct tctgcctcgc
     5221 cgttgcggaa gcggaggaaa tgctccttgc cgtcgcgcca gacggtgagc tcgagccatt
     5281 cggaaagcgc gttgacgacg ctgacgccga ccccgtgaag gccgccggag accttgtagg
     5341 catt
//
LOCUS       DATAKH010000069        12939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36427,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000069 DATAKH010000000
VERSION     DATAKH010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 12939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12939
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36427"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..4610
                     /locus_tag="VHN55_02475"
     CDS             <1..4610
                     /locus_tag="VHN55_02475"
                     /inference="COORDINATES: protein motif:HMM:NF028519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SdrD B-like domain-containing protein"
                     /protein_id="HEX2802838.1"
                     /translation="GGSATGVFLKDTGNSGFFTVTGTGSTASSGGVIQNITGTDGQTA
                     TGIGIYLENVSNVSLNNLNLSGTFGNFGIRGSGVNNFTLRDSTMSGQFGSSNAADEDA
                     IRFGTQSSSGNGLTGTALFEGNNISGGYESNITIYNYGSGSLNLTVRDSANDAAVIGS
                     QGVDLGGGVHTGNDGILVETAGTSAFNLTILVDGVTFTAGRGDFLQVAAGGNTVQNIT
                     VQNNTFHNAHVNVVSGGGGITLGGAGNTSNYTATYLIQNNSFKGAEGPAIAASYGGQS
                     ANVSGVILNNTIGTLNGAVDSAQGSTGSNGGGSGIYVSSERFAGTGTVNHAVRIENNT
                     ITDIISGVGGIYLRSNDQGGGGTNRVEATILNNTIAEGGDFMYGGIYAIVGGSDSTDP
                     AVMGLDIRGNTINLDSPGTDNDADGNAIVLDQISPEAHFYVPGYAGSGQGEWVIPSGT
                     ASTGLSSFWTTSPRVNTLTNGDFPNNTTGGVDAGLVDGLTGGAFVLAVPILAAPAQPL
                     DWEAGLADAQQQWLDAQNSAGDAIVTTQPYGDPIPVDDDGGAITPQPYGDPIPVDADD
                     GILTQAELDSLVEAAIERWIDAGATPEQVAAMRAASFSVADMAGAYLASSTAGSVQVD
                     SDGAGFGWFLDSTPGDDSEYSGSGTRLTADAGGSADGRMDLLTVLMHELGHQVGLDDL
                     YQSSDSGELMYGYGQIGTRRLASADDLDGADLDHPEHASYVVLTPTVGTLPAGKAVRV
                     IYDATVDSFSNEVIGNPFSNNVTIKGSNFSDVAIGAESLTVDSLTLGNRIFGDTNGNG
                     IYDVGDTGIDGVALTLFVDNGSVVGAFDATDTQVATTTTAGGGFYAFANLAAGDYIVR
                     VDAGNFTGGGALTGRVNSPGTGDPDNNIDNDDNGVAGIGGATVSQAITLDYNSEPTAG
                     TGNDTNNTLDFGFFAVDAEDDSFATDEDTPITSGNVLDDNGNGADSGGAVTAVNGNAG
                     DVGNPVILPSGAELTLNSDGTFAYDPNGAFDETPTSSSGASNQPATDSFTYELDGGDT
                     ATVTITIDGVDTDDTLVGTAGNDVLDGGAGADSMTGGPGDDEYFVDNSGDVVIENLGE
                     GLDVVRSTVSFSLAGQDIERLVLNGANPIDGTGNGLDNGLAGSSADNRLDGAGGADKM
                     SGGLGNDTYVVDNAGDYVKESAGAGTDTVEASVNYHLNDNVENLTLTGGTATRAVGNS
                     LANVITGNDIGNVLDGRGGADTINGGDGNDRIYGGTGADTMSGGLGDDTFYVDNAGDA
                     VIEGIGGGFDVVRSSVAFSLAGQDVERLVLTGAGAIDGTGNGLNNVISGTSAANRLDG
                     GGGADKMAGGGGNDTYVVDDAGDYVKERSGGGTDTVEASANYHITDHVENLILTGAVA
                     TRAVGNSLDNAITGNGIGNVLDGRGGADVIDGGGGDDRLYGREGNDTLTGGSGADKFV
                     FDSALGAGNVDSITDFATGVDRIQLDDDIFTAFVGPGSLDPAAFRAGTSAQDGDDRII
                     YDSSTGNIYYDADGLGGTAQVLFAQLVPSTALASGDFIIGD"
     gene            complement(4668..6095)
                     /gene="astD"
                     /locus_tag="VHN55_02480"
     CDS             complement(4668..6095)
                     /gene="astD"
                     /locus_tag="VHN55_02480"
                     /EC_number="1.2.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019053255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
                     /protein_id="HEX2802839.1"
                     /translation="MSNSLVSTEPATGRKIWSGKPGDAGAEVAAARAALPDWAGHSVA
                     YRTEALRRFANVVRKREKDFATLISRETGKPFWETQTEVAAVINKVEISINAHGERTP
                     KRTIEAAMGSKVSLRHKPHGVLAVLGPYNFPAHLPNGHIVPALIAGNAVVFKPSEKTP
                     ATGEFLVQCYRDAGIPEDVVRLLIGGPDQGKALAAEAGIDGLLFTGSARAGMALHKQF
                     AETPQKILALELGGNNPLVVWHAKDIEAAAAIAVQSAFLSAGQRCTAARRLIVEDGKD
                     KPLLDAIAGMIDRIIVDEPFADPQPFMGPVIDNDTAHHLQEQWVGLMMKGGKPIRRLD
                     RPFDDRPYLTPALIDVTEAKDVPDEEIFGPVLQVIRVGSFDDAIAEANNTRFGLAASL
                     LGGTPDQYEHFWGHVRAGVINWNKPTNGAPSTAPFGGIGLSGNHRPSAFYAADYCAYP
                     VTSVHAERIRGTIAQGLRDPNMVED"
     gene            complement(6128..7525)
                     /locus_tag="VHN55_02485"
     CDS             complement(6128..7525)
                     /locus_tag="VHN55_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010403892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HEX2802840.1"
                     /translation="MPLSQSYRPKVRIFDLGDGFFDPVEPAAFPQCTPRFLNERAAHS
                     VGLGQLSSEEWAAHFCRFEPLADNLKEPLALRYHGHQFRVYNPDIGDGRGFLFAQLLD
                     DRGRLLDLGTKGSGKTPYSRGADGRLTLKGGVREILATEMLEALGVNTSKSFALFETG
                     EQLTRGDEPSPTRSAVLTRLSHGHIRIGTFQRQAFFKDVETINRLVRYCLEHLYGEAP
                     AADDGANAIRLFGLVSEKTAELAASYMAAGFVHGVLNSDNINITGESFDYGPWRFAPH
                     WDGEFTAAYFDHFGLYAFGRQAEAIQWDLAQLAGCLSLVTEAPPLSDALAKWGQQFEQ
                     AIVAKLLWRLGIAAGDQESDHELARTLVGALETKTATIDRIFFDWRGGRDPGADAYPG
                     EVFRNLAALTARRGRRPSHAYWSDADPCSMHIEEVEAIWESIAERDDWAPFEAKIAAV
                     RRTGEAMVQDAPDAA"
     gene            7567..8433
                     /locus_tag="VHN55_02490"
     CDS             7567..8433
                     /locus_tag="VHN55_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020820992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2802841.1"
                     /translation="MASWSDRYWTSRDGLKLHYREYAGPADRPPVLCLHGLTRNCRDF
                     ESLADRLAGGWRVITVDFRGRGDSEYDPQPTRYAPPTYAADVLQLLDEQSIGEAVFVG
                     TSLGGLTTMVVAAFAAQRIAGAVLNDVGPELDMAGIERIRTYVGQPAQFRDWDEAAAR
                     LSATHADRHAGYGRDEWLRYAKRVARETDRGVEFDYDMAIAEPFKQMDDASVAAADAW
                     PLFQALAGRPVLILRGEHSDLLSRETAERMREAVQGAELVTVPNVGHAPDFDEPEAVA
                     AVDRLLQRVLDR"
     gene            complement(8430..9026)
                     /locus_tag="VHN55_02495"
     CDS             complement(8430..9026)
                     /locus_tag="VHN55_02495"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX2802842.1"
                     /translation="MRQLRIVLWVVVAIALIAFALLFLNSSRDRAAPQQPVAAPSFGG
                     PFTLVGADGRPFGSDELKGKPYALFFGFTHCPDTCPTTLARLVRLRREAGGDSAFNIV
                     FVTVDPERDGPKEMASYSDAFGAPVIGLTGSPAQIAQVKKQFGIYSEKVPGKDGDYTV
                     DHTATVLLFDREGKFVATVATDEQDAPALAKLKRITAA"
     gene            complement(9023..9460)
                     /locus_tag="VHN55_02500"
     CDS             complement(9023..9460)
                     /locus_tag="VHN55_02500"
                     /inference="COORDINATES: protein motif:HMM:NF016221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEX2802843.1"
                     /translation="MKKCAVFAAVLLASCDAGAPPSISVADAWARATGPGQSSTAAYL
                     TVRNSGGPDSLLSVSSPAGAASLHSTSMTDGIMRMRHLEALEVPAGSTVTLEPGATHV
                     MLTGLKTPIAAGSSFPLTLSFERSGERRVTVTVRPASSAGEAM"
     gene            complement(9554..10888)
                     /locus_tag="VHN55_02505"
     CDS             complement(9554..10888)
                     /locus_tag="VHN55_02505"
                     /inference="COORDINATES: protein motif:HMM:TIGR01843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEX2802844.1"
                     /translation="MGFYKFEAAATPDDPKRDIRIGGAIAGFFFVVLLGWAAFTPLDA
                     AVSANGVISVLGNRQAVQHPTGGVVTAMNVREGQQVKQGDVLIELSAPETLAAERSLT
                     SDYFMLLAQRARLVAEQAGRPTFDPPVEFASVTDRDRVLAEAALRMQHGEMQARKASL
                     SAQQSVLVQRARQLNEQKFGYAERRKSLVEQRRILDEELSGLREVAEKGFASKNRVRA
                     LERAEADLRGQEAAMTAEMARAGEGMGEARMQSISLVQGIQQQIATDLRETEARLSEV
                     LPKLIAVREQLERAQIRAPATGHVVGLTIFTVGGVVAPGQTLMEIVPDERALVVQAQV
                     DPADADDVYAGQEAQMRFESVRGHNIPLITGEVRNISADRFTDENTGRAYFRAEIEVK
                     PEDFAKVQSLLGHGQLRPGLPVSAMLNVRKRSALQYLFEPLTGTFHRALHEQ"
     gene            complement(10891..12600)
                     /locus_tag="VHN55_02510"
     CDS             complement(10891..12600)
                     /locus_tag="VHN55_02510"
                     /inference="COORDINATES: protein motif:HMM:TIGR01842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEX2802845.1"
                     /translation="MKIAGITLPPLLAKAALECRPHVGAAALFSLGVNLLYLAPAIYM
                     LQVYDRVVPTGGVATLWFITLALAISLLSLSSLDAIRLRLLVRASLRLDALVTPRLLG
                     RAIATGPSGTQAIRDFDTVRTTIASPAAAGLLDVPWLPIFIVVGFLLHFWIGILTVFS
                     AAAMIGLAWVNQKRTRPAIESGTAELASVHNWTQGASQQGDTVRALGMTSRVVTLGLA
                     KRSSAVTTLATAQFDGSRFTAAGRFLRLFVQSAALGLGALLAIAGEVSMGAIIAASII
                     VGRALQPVDALIGGWSSLMAARAALSRLSKTLESEPVEQEVRTRLPDPKGQVSLNQVG
                     VRASDGRPILFGVSLEVTPGEVLAVIGPSGSGKTTLSRIIVGAAPATVGTVRIDSAQI
                     SDWDSDDLGRHIGYMPQQPSLLEGTIRDNICRFSDSIDREAVDAEVVAAATQAGVHEL
                     ILHLPEGYDTQLGPLGAGLSAGQAQRIALARALYGNPSLLVLDEPNSWLDSEGELALA
                     TAVKAARARGAAVVIAAHRKSILDYCDRILVLDSGRPRLLGETAKVMAQLAAPAKKSE
                     TAA"
     gene            complement(12714..12878)
                     /locus_tag="VHN55_02515"
     CDS             complement(12714..12878)
                     /locus_tag="VHN55_02515"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802846.1"
                     /translation="MTYAFCAGMDPAEAFRLGVAAGAAAASSKGARLCAGSEVRRLLD
                     RVPKMDRSRP"
BASE COUNT         2324 a         4250 c         4235 g         2130 t
ORIGIN      
        1 acggtggcag cgccaccggc gttttcctga aggacacggg caatagcggc ttcttcacgg
       61 tgaccggcac cggctcgacc gcgagctccg gcggcgtcat tcaaaatatc accggtaccg
      121 atggccagac cgccaccggc atcggcatct atctcgaaaa cgtcagcaac gtctctctga
      181 acaacctcaa cctcagcgga acgttcggca atttcggcat ccgcgggtcc ggggtcaaca
      241 acttcaccct tcgcgacagc accatgtcgg gccagttcgg cagttccaat gctgccgacg
      301 aagacgccat tcgcttcgga acgcaaagct cctcgggcaa cggccttacc ggcaccgcat
      361 tgttcgaagg caacaacatc agcggcggat acgagagcaa catcacgatc tacaattacg
      421 ggtcgggatc gctcaacctc accgtacggg acagcgccaa tgacgcggcc gtcatcggca
      481 gccagggcgt ggatctcggc ggaggggtgc acaccggtaa cgacggcatt ctggtcgaaa
      541 ccgcgggcac ttcagcgttc aacctgacca ttttggtcga tggcgtcacc tttactgccg
      601 ggcgcggaga ctttctgcag gtcgccgccg gcggcaacac ggttcagaac atcaccgtcc
      661 agaacaacac cttccacaat gctcatgtga acgtcgtatc cggcggcggc ggaatcacgc
      721 tcggcggcgc cggcaatacc tccaattaca ccgccaccta tttgatccag aacaacagct
      781 tcaagggggc cgaaggcccc gccatcgcgg caagctatgg cggtcaaagc gcaaacgtct
      841 ccggcgtgat tctcaataac acgatcggaa cgctcaatgg tgcagtcgac tccgctcagg
      901 ggtcgaccgg ctcgaatggt ggcggctccg ggatctacgt gtcgagcgag cgcttcgccg
      961 gcaccggcac cgtcaatcat gccgttcgca tcgagaacaa cacgatcacc gacattatca
     1021 gcggagtcgg cgggatctac cttcgatcga acgatcaagg tggcggcggc acaaaccgtg
     1081 tcgaagcgac gatcctcaac aacacgatcg ccgagggcgg cgacttcatg tacggcggca
     1141 tctacgccat cgtcggcggt tcggactcta ccgacccggc agtgatgggc ctcgatatcc
     1201 gcggcaacac catcaacctg gattcgcccg gcacggacaa tgatgcggac ggaaacgcaa
     1261 tcgtcctcga tcaaatctcg ccggaagcgc acttctatgt cccgggatac gcgggctccg
     1321 gccaggggga atgggttatc ccgtcgggca cagccagcac cggtctcagc agcttctgga
     1381 cgacatcgcc acgcgtgaac acgctgacca atggcgattt cccgaacaat acaacggggg
     1441 gagtcgacgc cggcctggtc gacgggctga ccggcggcgc cttcgtcctt gccgtgccga
     1501 ttcttgccgc gcccgctcag ccgctcgatt gggaagcggg cctcgccgac gcacagcagc
     1561 aatggctcga cgcgcagaac agcgccggcg acgcgatcgt cactacgcag ccttacggcg
     1621 atccgatccc ggtcgacgac gacggcggcg ccataactcc gcagccttac ggcgatccga
     1681 tcccggtcga tgccgacgac ggaatcctca cccaggccga gctcgactcc ctcgtcgaag
     1741 cagcgatcga gcgctggatc gatgccggtg cgactcccga gcaggtggcg gcaatgcgag
     1801 ccgcatcgtt ctccgtcgcc gacatggcgg gcgcctatct ggcctcgagc acggccggaa
     1861 gcgtgcaggt cgacagcgac ggcgccggct tcggctggtt cctcgattcg acgccgggcg
     1921 acgacagcga atattccgga tcgggcaccc gcctcaccgc cgatgctggc ggctcggccg
     1981 acggccggat ggacctgctc accgtgctga tgcacgagct cggccaccag gtcggcctcg
     2041 acgacctcta tcagtcaagc gactccggcg agctgatgta cggctacggc cagatcggca
     2101 cccgccgttt ggcttcggcc gacgacctcg acggcgccga cctcgatcat cccgagcacg
     2161 cttcctacgt ggtcctgacc ccgaccgtcg gcaccctgcc ggccggtaag gcggtgcgcg
     2221 tgatttacga cgcgactgtc gacagtttct cgaacgaggt catcggcaat ccgttcagca
     2281 acaacgtcac catcaagggc agcaacttct cagacgttgc gatcggcgcg gagtcgctca
     2341 ccgtcgattc gctgacgctt ggcaaccgca tcttcggcga caccaacggc aacggcatct
     2401 acgacgtcgg cgacaccgga atcgacggcg ttgcgctgac tttgttcgtc gacaacgggt
     2461 cagtcgtggg cgcgttcgac gcgaccgata cgcaagttgc cactacgacc accgccggcg
     2521 gcggcttcta cgcattcgcc aacctcgcag cgggcgatta cattgttcgc gtcgatgccg
     2581 gcaatttcac cggcggcgga gcgcttaccg gccgcgtcaa ctcgcctggt accggcgatc
     2641 ccgacaacaa catcgacaac gacgacaacg gtgtcgccgg catcggcgga gccaccgtaa
     2701 gccaggcgat cacgctcgac tacaacagcg agcccacggc cggcacgggc aacgatacca
     2761 acaacacgct cgacttcggc ttcttcgccg tcgatgctga agacgactcc ttcgccaccg
     2821 acgaggatac gccgatcacg tccggcaacg tgctcgacga caatggcaac ggtgccgaca
     2881 gcggcggcgc cgtcacggca gtcaacggca atgccggcga cgtcggcaac cccgtgatcc
     2941 tgccttccgg cgcggagctg accctcaatt cggacggcac attcgcctac gatccgaacg
     3001 gcgcgttcga cgaaactccg acgtcatctt cgggagcctc gaaccagccg gcgaccgaca
     3061 gtttcacata cgagctggac ggcggcgata cggcgacggt gaccatcacc atcgacggag
     3121 ttgacaccga cgacacgctg gtcggcaccg ccggcaacga cgtgctcgac ggtggcgccg
     3181 gtgcagacag catgaccggc ggccccggcg acgacgaata tttcgtcgat aactccggcg
     3241 acgtcgtgat cgagaacctg ggcgagggcc tcgacgtggt tcgctcgacc gtctcgttca
     3301 gccttgccgg ccaggacatc gagaggctcg tcctcaacgg tgcgaacccg atcgacggca
     3361 ccggcaacgg cctcgacaat ggccttgccg gaagctcggc cgacaaccgg ctcgacggag
     3421 ccggtggcgc cgacaagatg agcggcggcc tgggcaacga cacctatgtc gtcgacaatg
     3481 ccggcgacta tgtgaaggaa agcgccggcg ctggcactga caccgtcgag gcgtcggtca
     3541 actaccatct taacgacaat gtcgagaacc tgaccctgac cggcggaacc gcgaccaggg
     3601 ccgttggcaa cagcctcgcc aacgtgatca ccggaaacga cattggcaac gtcctcgatg
     3661 gacgcggcgg tgccgatacg atcaacggcg gcgacggcaa cgaccggatt tatggcggaa
     3721 ccggtgccga cacgatgagc ggcggcctgg gcgacgacac tttttatgtc gacaacgccg
     3781 gcgacgcggt catcgaaggg atcggcggcg gcttcgacgt ggtccgctcg tcggtggcgt
     3841 tcagcctcgc cggccaggac gtggaaaggc tagtcctgac gggcgcgggc gcgatcgacg
     3901 gcaccggcaa tggcctgaac aatgtcatct ccggcacctc ggccgccaac cggctcgacg
     3961 ggggcggcgg cgccgacaag atggccggcg gcggcggcaa cgacacctat gtggtcgacg
     4021 atgccggcga ctatgtgaag gaacggtccg gcggcggcac cgacacggtc gaggcgtcgg
     4081 cgaactatca catcaccgac catgtcgaga acctgatcct gaccggcgcg gtcgccacca
     4141 gggcagtcgg caacagcctc gacaacgcca tcaccggcaa cggcattggc aacgtgctcg
     4201 acgggcgcgg aggcgcggac gtgatcgatg gcggcggcgg cgatgacagg ctctacgggc
     4261 gtgagggcaa cgacacgctc accggcggtt ccggagccga caagttcgtg ttcgacagcg
     4321 cgctcggcgc cggcaatgtc gactcgatca ccgattttgc caccggcgtc gaccggatac
     4381 agctggacga tgacatcttc accgcattcg tcgggcctgg gtccctcgat ccggctgcct
     4441 tccgcgccgg caccagcgcc caggacggcg acgaccgcat catttacgac agcagcaccg
     4501 gcaacatcta ctatgacgcc gacggcctcg gcggcaccgc ccaggtcctg ttcgcgcagc
     4561 tcgtcccaag cactgcgctg gccagtgggg acttcattat cggggactga tggaatcgtt
     4621 ctcgcgcccc accacagcgc gaaagggccg cttgcgagct cccggagcta gtcctcgacc
     4681 atgttggggt cgcgaaggcc ctgggcgatg gttccgcgaa tgcgctcggc gtggacgctg
     4741 gtgaccggat aagcgcaata atcggccgcg tagaaagcgc tcgggcggtg gtttccggac
     4801 aggccgatgc cgccgaacgg ggccgtcgag ggggcgccat tggttggctt gttccagttg
     4861 ataacccccg cgcggacgtg gccccagaaa tgttcgtact ggtcgggcgt gccgcccagc
     4921 aggctggcgg cgaggccaaa gcgcgtgttg ttggcttccg cgatcgcatc gtcgaaactc
     4981 ccgacccgga tcacctgcag gaccggcccg aagatttcct cgtccggcac gtccttagcc
     5041 tccgtcacgt cgatcagcgc gggcgtcagg tagggccggt cgtcgaacgg acggtccagc
     5101 cgccggatgg gcttgccgcc cttcatcatc aagccgaccc attgctcctg aaggtgatgg
     5161 gcagtgtcgt tgtcgatgac gggacccatg aacggctgcg ggtcggcgaa cggctcgtcg
     5221 acgatgatcc ggtcgatcat ccccgcgatc gcgtcgagaa gcggcttatc cttgccgtcc
     5281 tcgacgatca gccggcgggc ggcggtgcag cgctggccgg cgctaaggaa ggcggactgg
     5341 actgcgatcg cggccgccgc ctcgatgtcc ttggcgtgcc agacgacgag cggattgttg
     5401 ccgccaagct cgagcgcgag gatcttctgc ggagtttcgg cgaactgctt gtggagggcc
     5461 attccggcgc gagcggagcc ggtgaacagg agaccgtcga ttcccgcttc ggcggcgagc
     5521 gccttgccct ggtccgggcc gccgatcagc agccggacaa cgtcttcggg aatgccggcg
     5581 tcgcggtagc attggacgag gaattcgccg gtcgccgggg tcttttccga cggcttgaac
     5641 acgaccgcat tgccggcgat cagcgcgggt acgatatggc cgttgggcag atgcgcgggg
     5701 aaattatacg ggccgagtac agcaaggacc ccgtgcggct tgtgccgcaa cgataccttg
     5761 cttcccatcg ccgcctctat cgtgcgcttg ggggtccgct cgccgtgggc gttgatcgaa
     5821 atctcgacct tgttgatgac ggccgcgacc tcggtttggg tttcccagaa cggcttgccg
     5881 gtctcgcggg agatcagcgt cgcgaagtcc ttttcccgct tgcgaacgac gttggcgaag
     5941 cggcggagcg cctctgtgcg ataggcgacc gaatggccgg cccagtccgg cagggccgcg
     6001 cgcgcggcgg cgacttccgc accggcatcg ccgggctttc ccgaccagat tttcctaccg
     6061 gtcgcgggct cggtcgagac aaggctgttg gacatggggc gcgctccacc acgagagggc
     6121 agcggggtca agccgcgtct ggtgcatcct ggaccatcgc ctcgcccgtt cgacgaacgg
     6181 cggcgatctt ggcttcgaac ggcgcccagt cgtcgcgctc ggcgatcgac tcccagatcg
     6241 cctcgacctc ttcgatgtgc atcgagcaag ggtcggcgtc ggaccaataa gcgtggctcg
     6301 gacgtcgtcc gcggcgagcg gtcaaggcgg cgaggttgcg gaagacctcg cccgggtaag
     6361 cgtccgcccc cggatcgcgg ccaccgcgcc agtcgaaaaa gattcggtcg atcgttgcag
     6421 tcttagtctc gagcgctccg acgagcgtcc ttgccagctc gtgatccgac tcctggtcgc
     6481 cagcggcaat gccaaggcgc cacagcagct tggcgacaat cgcctgctcg aattgctgac
     6541 cccacttcgc cagcgcgtcg gaaaggggcg gcgcttctgt gaccagcgac aggcaacccg
     6601 caagctgcgc caggtcccac tggatcgcct cggcctggcg gccgaaggcg tagagcccga
     6661 aatggtcgaa ataagcagca gtgaactcgc cgtcccaatg cggcgcgaac cgccacgggc
     6721 catagtcgaa actctcgccg gtgatgttga tattgtcgct gttaaggacc ccgtggacga
     6781 agccagcggc catgtagctt gcggcaagct cggcggtttt ctccgacacc agtccgaaca
     6841 agcggatcgc gttggcaccg tcgtccgctg ccggggcttc gccgtagagg tgctccaggc
     6901 aatatctaac cagacggttg atcgtctcga catccttgaa gaacgcctgg cgctggaacg
     6961 tgccgattcg gatatggccg tggctaaggc gggtcaggac cgccgagcgg gtcggtgacg
     7021 gctcgtcgcc tcgtgtgagc tgctcgccgg tctcgaacaa ggcaaagctc ttcgacgtgt
     7081 ttacgcccag cgcttcgagc atctcggtgg cgaggatttc gcgtactcca cccttgagag
     7141 tcagccggcc gtcggcgcct cggctgtagg gcgtcttgcc ggaccctttc gtgccgaggt
     7201 cgagcagccg cccgcgatcg tcgagcaact gcgcgaacag gaatccgcgc ccgtccccga
     7261 tgtcaggatt gtacacccgg aactggtggc cgtgatagcg cagcgcgagc ggctccttca
     7321 gattgtccgc aagcggctcg aagcggcaga aatgcgccgc ccattcctcg cttgaaagct
     7381 gtcccagacc gacgctgtgc gccgcccgct cgtttaggaa tcgcggcgtg cattgcggaa
     7441 aggctgcagg ctcgacgggg tcgaaaaacc catcgccgag atcgaatatc cgcaccttgg
     7501 gccgatagga ttgcgagagc ggcattcgcc cgcgataggg aagcaattcg ttcgggggaa
     7561 cagtgcgtgg cgagttggag cgatcggtac tggaccagcc gagacgggct gaagctgcac
     7621 tatcgcgagt atgccggacc cgccgaccgt ccgccggtcc tttgcctcca tggtctcacc
     7681 cgcaactgcc gcgatttcga aagccttgcc gaccgccttg ccggcggctg gcgagtcatc
     7741 actgtcgact tccggggccg cggagacagc gaatacgacc cgcagccgac ccgatatgcg
     7801 ccgccgacct atgccgccga cgtcctgcaa ctgcttgacg agcagtcgat aggcgaggcg
     7861 gtgtttgtcg gcacgtcgct cggtgggctg acgacgatgg tggttgccgc gttcgctgca
     7921 cagcggatcg ccggcgcagt cctcaacgat gtcggcccgg agctcgacat ggcggggatc
     7981 gagcggatca ggacctatgt cggacagccc gcacagttcc gcgactggga cgaggcggcc
     8041 gcccggcttt cggcaaccca tgccgacagg catgccggat acggccgcga cgaatggctt
     8101 cgatatgcga agcgcgtcgc ccgcgaaacc gaccgcggcg tcgaattcga ctacgacatg
     8161 gccatcgccg aaccgttcaa gcagatggac gatgctagcg tggccgctgc cgatgcgtgg
     8221 ccgctgttcc aggcgctcgc cggacggccc gtcctgatcc ttcgcggcga gcatagcgac
     8281 cttctgtcgc gcgaaaccgc ggaaaggatg cgcgaagctg tgcagggcgc agaactcgtg
     8341 acggtgccga acgtgggcca cgcgcccgat ttcgacgagc ctgaggccgt cgcggcagtc
     8401 gatcgcttgc ttcagcgggt tctcgaccgc taggccgcgg tgatccgctt gagcttggcg
     8461 agtgccggcg cgtcctgctc gtcggtcgcc acggtcgcga cgaatttacc ttcgcgatcg
     8521 aacagaagga ccgtggcggt gtggtcgacc gtatagtcgc cgtctttgcc cggcaccttt
     8581 tccgaataga ttccgaactg cttcttcacc tgcgcgatct gcgcgggcga gccggtgagg
     8641 ccaatcaccg gcgctccgaa ggcgtccgaa tagctcgcca tctcctttgg cccgtcgcgt
     8701 tccggatcaa cggtgacgaa gacgatgttg aaggccgaat ccccgccagc ctcgcggcga
     8761 agccgaacca gccgcgccag ggtggtcggg catgtgtcgg ggcagtgggt gaatccgaag
     8821 aacagggcgt agggtttgcc tttcagctcg tccgacccga acggacggcc gtcggctcct
     8881 acgagggtga agggcccgcc gaaacttggc gctgcgactg gctgctgcgg cgcggcgcga
     8941 tcccgggacg agttgaggaa gagcagggca aaggcaatca gcgcgatcgc caccacgacc
     9001 caaaggacaa tccgaagctg cctcacatcg cctctccagc gctactcgcc gggcggaccg
     9061 taaccgtcac tcgacgctcg cccgatcttt cgaagctgag ggtgagcgga aagctcgagc
     9121 cggcggcaat cggcgttttc aggccggtga gcattacgtg cgtggctccg ggttcaagcg
     9181 tgaccgtcga gccggcgggg acttcgagcg cttcgaggtg gcgcatccgc atgattccat
     9241 cggtcatcga agtcgagtga agcgacgccg cgccggccgg gctggagacc gacaggagac
     9301 tgtccggacc gccgctgttg cgaacggtta gataggcggc cgttgacgac tggccgggcc
     9361 cggtggcgcg cgcccaggcg tcggcgacac taatggaagg cggcgcgccg gcgtcgcatg
     9421 acgcgagcag gacggctgcg aaaaccgcgc atttcttcac ttggccaatt ctccacggcg
     9481 gcgagtgcga taagtcgctc cgccttcgcg aaggccggcg gcggcgtcaa ccgccccggg
     9541 cgcgcagtgc cccttattgc tcgtgcaggg cgcggtggaa ggtgccggtc agcggctcga
     9601 aaaggtactg gagtgccgag cgcttgcgaa cgttcagcat cgcggagacc ggaagtcctg
     9661 ggcgaagctg gccgtggccg agcaggctct gcaccttcgc gaaatcttcc ggcttcacct
     9721 cgatttcggc gcggaaatag gcacggccgg tattctcgtc ggtgaagcgg tcggcggaga
     9781 tgttgcgcac ctcgcctgtg atcagcggaa tgttgtgacc gcggacgctt tcaaaccgca
     9841 tctgcgcttc ctgtccggca tagacgtcgt cggcatcggc cgggtcgacc tgcgcctgca
     9901 cgaccagcgc gcgttcgtcg ggcacgattt ccatcagcgt ctggccggga gcgacgactc
     9961 cgccgacggt gaagatggtg agcccgacga cgtggccggt tgcgggagcg cggatctgtg
    10021 cccgctcaag ctgctcgcga acggcgatga gcttggggag cacttcggaa agccgggcct
    10081 ccgtttcgcg aaggtcggtc gcgatctgtt gctggatccc ctgcaccagc gaaatcgact
    10141 gcatccgggc ctcgcccatc ccctcgccgg cacgcgccat ttcggcggtc atcgccgctt
    10201 cctgcccacg gaggtccgcc tccgcccgct cgagcgcccg gacccggttc ttcgacgcaa
    10261 agcccttctc ggcgacctcg cgaagcccgg acagctcttc gtcgaggatt cggcgttgct
    10321 caacaagcga cttgcggcgc tcggcgtagc cgaatttctg ttcgttgagc tgccgcgccc
    10381 gctgcacgag cacggactgc tgcgccgaaa gcgacgcctt gcgggcctgc atttccccgt
    10441 gctgcatccg gagggcggcc tccgccagaa cccggtcgcg gtcagtgacc gaggcgaatt
    10501 ccaccggcgg gtcgaacgtg gggcgtcccg cctgctcggc aacgagccgg gcgcgttggg
    10561 caagaagcat gaaataatcg ctggtcagcg aacgctcggc cgcgagcgtt tccggcgcgg
    10621 aaagctcgat cagcacgtcg ccttgcttta cctgctggcc ttcgcggaca ttcatcgcgg
    10681 tgacgacccc gccggtcggg tgctgaacgg cctggcggtt tcctaggacg gaaatgacgc
    10741 cgttggcgct cactgctgcg tcaagcggcg tgaacgcggc ccagccgagc aggacgacga
    10801 agaagaagcc ggcaattgcg ccgccgatgc ggatgtcccg cttcggatcg tcgggcgtcg
    10861 ccgccgcttc gaacttgtag aatcccatgt tcacgcggca gtctccgatt tcttggctgg
    10921 cgccgcaagc tgggccatga ccttggccgt ctctccgagc agccgcggcc gcccggaatc
    10981 gagaaccagt atcctgtcac aatagtcgag gatcgatttg cggtgggctg caatcaccac
    11041 ggcggccccg cgtgcccgag cggccttcac ggctgttgcg agggcaagct cgccttcaga
    11101 atcgagccac gaattcggct cgtcgaggac cagcagggac gggtttccgt acaacgcgcg
    11161 cgcaagcgcg atccgctgtg cctggcccgc cgacagtcct gcgcccagcg ggccaagctg
    11221 cgtgtcatag ccttcgggca gatggaggat cagctcgtgc accccggcct gggtggcggc
    11281 tgcgaccact tctgcatcga ccgcctcgcg gtcgatgctg tcggagaatc ggcagatgtt
    11341 gtcgcggatc gttccttcga ggagcgacgg ctgctgcggc atgtaaccga tgtggcggcc
    11401 taggtcgtcc gaatcccagt cgctgatctg ggcgctgtcg atccgcacag tgccgaccgt
    11461 ggccggagcg gcaccgacga taatcctcga aagggtggtc ttgcccgatc cgcttgggcc
    11521 gatcactgca agcacttcgc ctggcgtgac ctcgagcgag accccgaaca ggatcggccg
    11581 tccgtccgat gcgcgaaccc cgacctggtt gagcgaaacc tggcccttgg ggtctggcag
    11641 gcgagttcgg acttcctgct ccacaggctc ggactcgagc gtcttggaga ggcgcgaaag
    11701 cgccgcccgc gcggccatca gcgacgacca gccgccgatc agcgcgtcga ccggctgaag
    11761 cgcccggccg acgatgatcg aagcggcgat gattgcgccc atcgacactt cgcccgcgat
    11821 tgcgaggagg gcaccgaggc cgagcgcggc ggactggacg aagagccgga ggaagcggcc
    11881 ggctgcggta aagcggctgc catcgaactg cgccgtcgcc agcgtagtga ccgccgacga
    11941 gcgcttggcg aggccgaggg tcacgactcg cgaggtcatt ccaagcgccc gcaccgtgtc
    12001 accttgctgg ctagcccctt gggtccagtt gtgaaccgag gcgagttcgg cagtgcccga
    12061 ttcgatcgcc gggcgcgtgc gcttctggtt cacccaggcc aggccaatca tcgcggccgc
    12121 cgaaaagacc gtaaggatgc cgatccagaa gtggaggaga aagccgacga cgatgaaaat
    12181 cggaagccac ggaacgtcga gcaggcctgc cgcggccggg ctcgcgatgg tcgttcgaac
    12241 ggtgtcgaaa tcgcggatcg cctgagttcc gctgggcccg gtggcaatcg cccggccaag
    12301 aagccgcggg gtcaccagcg cgtccagccg caggctggcg cgaaccagga ggcgaagccg
    12361 aatcgcgtcg aggctgctta ggctgaggag cgagatggca agcgcaaggg tgatgaacca
    12421 caaagtcgcc acgccgccgg ttggcacgac ccggtcatag acctggagca tgtagatcgc
    12481 gggcgcgaga tagagcaggt tcacgccaag gctgaacagc gccgccgcgc cgacgtgcgg
    12541 gcggcactcg agggccgcct tcgccagcaa tggcggaaga gtgattccag cgatcttcat
    12601 tcgaaccccg tcccgcgttc ttgttccccg agtcgaccct ttgcgattca cgcgtcattg
    12661 tcaacgcacc taagtacttg atgcgccagc gccttccgcc catcgagagc ctgctaaggg
    12721 cggcttctgt ccatctttgg gactctgtcg agcagacggc gaacttcgga gcccgcgcaa
    12781 aggcgcgcac ccttggagct tgcggcggcc gcgcccgccg cgaccccgag ccggaaggct
    12841 tccgccgggt ccatcccggc gcaaaaggcg taggtcatcg cgccgacgaa gctgtctccg
    12901 gccccgagag cgcttcgcgt ctcgactgcg acggcgggt
//
LOCUS       DATAKH010000070         4963 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_31845,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000070 DATAKH010000000
VERSION     DATAKH010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4963
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31845"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1559
                     /locus_tag="VHN55_02520"
     CDS             <1..1559
                     /locus_tag="VHN55_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX2802847.1"
                     /translation="GPMDNIPMFGDRKNGRAHIEYPHPLLEGILKETYGIFVYQEQVM
                     QAAQVLAGYSLGSADLLRRAMGKKIQREMDAQRATFVEGCATHNNIPAGKANELFDLI
                     DKFAGYGFNKSHAAAYALVAFQTAWLKAHHRPEFYAASMSFDMAQTDKLALFVEDMRR
                     GGVECLPPCLNSSDAFFTVEEGAVRYALGALKGVGEKAMDSVVAERAANGRFKSLDDF
                     AERIEPRLLNRRQVESLAGGGAFETLEPDRASVFAAAETILAHAASAADQRESGQHGL
                     FGSGDSSIPPIRLPDAQWSLVERMAAERDSFGFYFSGHPVETHEHLLTAHRVKRFDEI
                     GEVRIAEGERVTVTMAAMVEDVRWRTSAKGRRFLTATLSDPSGQFQATAFDDEPIEAL
                     QKAAANGACGLLSVELDRRSGDDTPRAAVKRFQPLESLAKRTRLLMTISLQDGDRMPQ
                     VAAELARCRGGTGAVRLNLSLKDGGEATVLAGRDFELDAELAARLERIAGDGRVDLSV
                     QEPPRLALVG"
     gene            complement(1604..2218)
                     /locus_tag="VHN55_02525"
     CDS             complement(1604..2218)
                     /locus_tag="VHN55_02525"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEX2802848.1"
                     /translation="MATSTQSRNSNKSRSRESKSAFSWSDNAGPLIGAALAGAAFGFA
                     ANIGRKLAMQGMEAAAGDWDEMLKKDHDEILKVLDQMLATDSTQTWKRSAYLMKLSHK
                     LDKHSYEEETVVYPALREDNDKVEADQLDTEHGEVKTLMFELKQMKAVSPDWLEKVRE
                     LRASLSAHMKMEENEVFPRLKNDLDEEKNAKVTAMVNKAGFMMA"
     gene            complement(2550..3278)
                     /gene="mtgA"
                     /locus_tag="VHN55_02530"
                     /pseudo
     CDS             complement(2550..3278)
                     /gene="mtgA"
                     /locus_tag="VHN55_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368725.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
     gene            3337..>4963
                     /gene="alaS"
                     /locus_tag="VHN55_02535"
     CDS             3337..>4963
                     /gene="alaS"
                     /locus_tag="VHN55_02535"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEX2802849.1"
                     /translation="MTSTNDIRRSFLEFFEKNGHAPVPSAPLVPHNDPTLMFVNAGMV
                     PFKNVFTGLETRPYSQATSSQKCVRAGGKHNDLDNVGYTERHHTFFEMLGNFSFGDYF
                     KDRAIELAWNLVTKEWGIDPDRLTVTVYHTDDEAFGLWKKIAGLPESRIIKIATKDNF
                     WAMGDDGPCGPCSEIFYDYGDDVPGGPPGSPDQDGERFTEIWNLVFMQFEQAAGEIVS
                     ELPSKSIDTGMGLERMASVLQGKRSNYDIDIFRSLIEASEDLTHTKAEGENKASHRVI
                     ADHLRASGFLVADGVLPANEGRGYVLRRIMRRAMRHAHLLGAKDPLMYRLVPALVAEM
                     GATFPELVRAQPLLEATLQQEETRFRQTLATGLKLLDEAAVDLAEGATLAGETAFKLY
                     DTYGFPYDLTEDALRARGLQVDREGFDAAMAKQKAAARAAWKGSGDKTSDELWFDLAE
                     QFGSTEFTGYSGDEGEGVVLAIVKDGSKVEAAEVGETVQVLLNQTPFYGESGGQVGDA
                     GKLTTLKGFQGEVEDTTKPLGKLHVLQTKVVAGE"
BASE COUNT          908 a         1521 c         1612 g          922 t
ORIGIN      
        1 ccggtccgat ggataacatc ccgatgttcg gcgaccgcaa gaacgggcgc gcgcatatcg
       61 aatatccgca cccgctcctg gaggggattc tcaaggagac ctacggcatc ttcgtctacc
      121 aggagcaagt gatgcaggca gctcaggtgc tcgccggcta ctcgctcgga agtgccgatc
      181 ttcttcggcg agcgatggga aagaagatcc agagagagat ggacgcccag cgcgcgacct
      241 tcgtcgaggg ctgtgctacc cacaacaata ttccggcagg caaggccaac gagctgttcg
      301 acttgatcga caagttcgcc ggctacggtt tcaacaagag ccacgcggca gcttatgctc
      361 tggtcgcttt ccagactgcc tggctgaagg cgcatcaccg gcccgaattc tacgccgctt
      421 cgatgagttt cgacatggcc caaacggaca agctggcgct tttcgtcgaa gacatgcgcc
      481 ggggcggggt ggaatgcctg ccgccgtgcc tgaatagcag cgacgccttc ttcacggtcg
      541 aggagggggc ggtccgatac gcgctcggag cgctgaaggg cgtcggcgag aaggcgatgg
      601 attcggtagt cgccgaacgg gcagcaaacg ggcgtttcaa atcgctcgac gattttgccg
      661 agcggatcga gccacggctg ctcaaccgcc gccaagtcga aagccttgcc ggcggaggcg
      721 cattcgagac gctcgagccg gaccgggcgt ccgtattcgc cgcggcagaa acgatccttg
      781 cccacgcggc gagcgcggcc gaccagcgcg aaagcggcca gcatgggctg ttcggatccg
      841 gggattcgag cattccgcct atccgcctac cggatgccca atggagtctc gtcgagcgaa
      901 tggcagcgga gcgggactcg tttggattct atttctcggg tcaccccgtc gagacccacg
      961 agcacttgct cacggcgcac cgcgtcaaga ggttcgatga gattggcgag gtcaggatcg
     1021 ccgaaggcga acgggtaacc gtcaccatgg cagcgatggt cgaggacgtg cgatggcgaa
     1081 cttctgcgaa gggccggcga ttcctcaccg caacgttgag cgacccgtcc gggcagttcc
     1141 aggcaacggc gttcgacgac gagccgatcg aagcgcttca gaaagcggcg gcgaacggcg
     1201 cttgcggcct gctgagtgtc gagcttgacc ggcgctcagg cgacgatacg ccgcgagcag
     1261 cggtgaagcg cttccagcca ttggagtcct tggccaagcg gactcggctg ttgatgacga
     1321 tatcgctgca agatggcgat cgaatgccgc aagttgccgc cgagctcgcg cgctgccgcg
     1381 gcgggaccgg cgcggtccgc ctcaacctgt cacttaagga cggtggtgaa gcaaccgtgc
     1441 ttgccggccg cgatttcgaa ctcgacgccg aactggccgc aaggcttgaa cgcatcgctg
     1501 gggacggccg cgtggacctg tcggtccagg aaccgccgag gctggcgctg gtcgggtgag
     1561 gtctgccgca gcttgccatg cccgaaggca tggcaagacc gcgtcacgcc atcatgaatc
     1621 cggccttgtt caccatcgcg gtgaccttgg cgttcttctc ctcgtccaga tcgttcttga
     1681 ggcgcgggaa gacttcattc tcttccatct tcatgtgcgc cgacagagag gcgcgcagct
     1741 cgcgaacttt ctcaagccag tcgggggaga ccgccttcat ctgcttgagc tcgaacatga
     1801 gcgtcttgac ctcgccgtgc tcggtgtcga gctggtcggc ctcgaccttg tcattgtcct
     1861 cgcgaagcgc gggatagacg accgtttcct cttcgtagct atgcttgtcg agcttgtgcg
     1921 acagcttcat cagataggcc gagcgcttcc acgtctgcgt cgaatccgtc gccagcatct
     1981 ggtcgaggac tttaaggatc tcgtcgtggt ccttcttcag catctcgtcc cagtccccgg
     2041 cagccgcctc catgccctgc atcgcgagct tgcggccaat attggcggca aagccgaatg
     2101 ctgctccggc gagagcggcg ccgatcagcg ggccggcatt gtcgctccac gaaaaagcgc
     2161 tcttgctttc gcggctgcgg cttttgttcg aatttcggct ttgagtactc gtagccatcg
     2221 caatcctcct tgacctggtt gccgattcaa cggtcatggc agggggcacg ttcctgtcgc
     2281 gaggcgcttg caggcaaccg tttgccgcgt cgtcagatgc tgttcgacgg ctgctccggc
     2341 ggctgcacca ccgcgtttgc gggtgcgggc ggagggggcg ctgcttcgtt cacggtcaaa
     2401 ggatcggctg gcggaaactc ctggacgacg ttctccaggg agggcgctgg tggcgtcctt
     2461 gccgtctcat attcctcgcc tggttgcggg cgttgcctgg tcgtgacctt gggcggcgcc
     2521 ttggctgccg gcgccgtgat gccctggtag acgcaggagt cgaggccatc gcgcccgacc
     2581 actccgattc gcgcggcgat ggtgctaccg tagcgacggg tgaagccttt gggagcgact
     2641 gccccgcgct tcttcggcag cggcagtacg gctgcgatcc gtgccgcttc ggtagcggtc
     2701 atcgcgtttg cgtcatggcc gaaatagcgc tgcgaaccgg cgttgacccc gtaagtgccg
     2761 atgccggtct cggcgaggtt caggtacagc tccatgatcc tccgcttcgg gtacattccc
     2821 tccatcagga aagtgaacca ggcctccagc ccctttcgag catagccgcc gccttgccag
     2881 aggaacgcat tcttcgctgt ctgctggctg atcgtggagc cgccgcggat gcgaccgccg
     2941 ctggcgttcc gcttcatcgc attttcgatg gcctccatgt cgaagccgtt gtgctggcaa
     3001 aacttgctgt cctctgccgc gatcgcggcg cggaccatat cgcggtcgat cctggtgata
     3061 ggcatccagt cgcgagtcgc gcctcggccg gcaaatacgt cgcccaacat ggtcgcggtg
     3121 accggcggat tgatgaaacg ataggcgagc acccacagta gagacagcac tatgaaggcg
     3181 aggatgatcc ggatgatcca gccaagcagg cgcgcgatcg gcccgcgctt gcgctggcgc
     3241 ttgtaggtcg ggattgcggg tctggagcgt tttgccattg gcgatgtcta gcgccgtcct
     3301 tgccgcagtg cagcagggca tttacatcga tggcaaatga cctcgaccaa cgacatccgc
     3361 cgctccttcc tcgaattttt cgagaagaac ggacacgctc cggtgccctc ggcgccgctg
     3421 gtgccgcaca acgacccgac cttgatgttc gtcaacgccg ggatggtgcc gttcaagaac
     3481 gtcttcaccg gactcgagac gcggccgtac agccaggcga cgagctcgca gaagtgcgtg
     3541 cgcgccggcg gcaagcataa cgacctcgac aatgtcggct acaccgagcg gcaccacacc
     3601 ttcttcgaaa tgctcggcaa tttctcgttt ggcgattatt tcaaggatcg cgcgatcgag
     3661 ctggcgtgga acctcgtcac gaaggaatgg gggatcgacc ccgataggct gaccgtcacc
     3721 gtctatcaca ccgacgacga ggcgttcggc ctgtggaaga aaatcgcggg attgcccgaa
     3781 agccgcatca tcaagatcgc gaccaaggac aatttctggg cgatgggcga cgatggtccc
     3841 tgcggtccct gttcggaaat cttctacgat tatggcgacg acgtacccgg cggcccgccg
     3901 ggctctcccg atcaggacgg cgagcggttc accgagatct ggaacctcgt tttcatgcag
     3961 ttcgagcagg cggcgggcga gatcgtctcc gagcttccga gcaagagcat cgacaccgga
     4021 atgggcctgg agcggatggc ctccgtgctt caggggaagc ggtccaacta cgatatcgac
     4081 atcttccgat cgctgatcga ggcgagcgag gatctgaccc acaccaaggc ggaaggcgaa
     4141 aacaaggcca gccaccgggt catcgccgac catttgcgcg cgtcgggttt cctcgtcgcc
     4201 gacggagtcc tgcccgcgaa cgagggcagg ggctatgttc tccgccgaat tatgcggcgg
     4261 gccatgcgcc acgcgcacct tctcggcgcc aaggacccgc tgatgtaccg gctggtacct
     4321 gcgctggtcg ccgaaatggg cgcgaccttt cccgaactgg tgcgggcgca gccgctgctc
     4381 gaggcgacgc ttcagcaaga ggaaacgcgg ttccggcaga cgctggcgac cggcctcaag
     4441 ctgctcgacg aagcggccgt cgacctggcc gagggtgcta cgctggccgg cgagactgct
     4501 ttcaagctct acgataccta tggctttccc tacgacctca ccgaggacgc gcttagagca
     4561 cgcgggctgc aggtcgaccg tgaaggcttt gacgctgcaa tggcgaagca gaaggcggcc
     4621 gctcgcgcag cgtggaaggg ctcgggagac aagacgtccg acgaattgtg gttcgacctc
     4681 gccgagcagt tcggaagcac cgagttcacc ggctattcgg gcgacgaggg cgaaggcgtc
     4741 gtgctggcga tcgtcaagga cgggtcgaag gtggaggccg cggaagtggg cgagacggtg
     4801 caggtcctgc tcaaccagac gccgttttac ggcgaaagcg gcggccaggt tggagacgcc
     4861 ggaaaactaa ctacactcaa agggttccag ggcgaagttg aggacacgac gaagcctctg
     4921 ggcaagctcc acgtgctgca gacgaaagtg gtcgcgggcg agc
//
LOCUS       DATAKH010000071        23358 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_1646,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000071 DATAKH010000000
VERSION     DATAKH010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 23358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23358
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1646"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1062
                     /locus_tag="VHN55_02540"
     CDS             <1..1062
                     /locus_tag="VHN55_02540"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX2802850.1"
                     /translation="GPILGPVLGGWLTDSYNWRWVFLVNLPVGILCFFLMLQFLPTTE
                     RHKRRFDKFGFAMLAIALAALQMFLDRGHQKDWFDSWEIIIEAGLAVGAFWMFVVHTV
                     TAKQPLFEREIFSDRNFATSLVFMVITGVLLLAGLALLPPLLQNLYGYSVLQSGYLTA
                     PRGVGTLISMLLAGRLVGKVDSRVLVGIGVILMGVSLWMMTGFAIDQPSRPVIVSGVV
                     QGLGLGLIFVPLQTLAFVTLSVRHRTTGASLLNLARNVGGSVGISIVSVQLARMAQVA
                     HADMASHITDSMIPTLDPNVLHAFGNQATAVAAYINAEITRQALFIAYLDDFKLMMWV
                     TFLVLPLLLLMRNSKTAAR"
     gene            complement(1059..2234)
                     /gene="metC"
                     /locus_tag="VHN55_02545"
     CDS             complement(1059..2234)
                     /gene="metC"
                     /locus_tag="VHN55_02545"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009823254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEX2802851.1"
                     /translation="MRDDKKHVDTRLVTGGRLKRWTGKLVNVPVDRGSTVLFDSVAEL
                     RSAKPGIDSHYYGLHGWPTQWALAEALTELEPGAAGTALVETGLAAVTAALMAVLECG
                     DELLMVDSAYWPTRRFCDDVLTRLGIATRYYDPLASADELESLAADNTRAIFLESPGS
                     LSFEVQDVPGICAMARRRGIASVLDNTWATPLLFPAIAHGADISIQALSKYAGGHSDL
                     LLGSITANADWYDRVQRTVFDLGHAAAPDDSWLTARGLRTLAVRLKRHEKSGLQVARW
                     LDEQPQVSRVLHPAFENCPGHEYWKRDFSGSSGLFSFVLNGGDSASRDRLIDRLKLFG
                     IGYSWGGFESLAVPAEPVRTASKLDWAGPAVRLHIGLESPDDLIADLAAALESYPAA"
     gene            2214..2534
                     /locus_tag="VHN55_02550"
     CDS             2214..2534
                     /locus_tag="VHN55_02550"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HEX2802852.1"
                     /translation="MLLVVAHAAPLSAPSAMGHIAIRVTPRSSKPGIGGWRASGDGRE
                     ELEVRVAEAPADGAANAAVVTLLAKALSLPRSQLEIVAGHSSRHKRLALPLEPDEVRS
                     RLKG"
     gene            2540..2965
                     /locus_tag="VHN55_02555"
     CDS             2540..2965
                     /locus_tag="VHN55_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEX2802853.1"
                     /translation="MAENKTKPTAQDVPGFLDGVPDPKRREDARALCRLMARETGEPP
                     VLWGPSIIGFGSYHYRYASGHEGDAPVVGFSPRARELVLYLYCHGEWSDELLARLGRH
                     RTGKACLYIKSLADVDEATLVELIRGSAAEIRKRYQGTT"
     gene            complement(3021..3557)
                     /gene="rpsI"
                     /locus_tag="VHN55_02560"
     CDS             complement(3021..3557)
                     /gene="rpsI"
                     /locus_tag="VHN55_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEX2802854.1"
                     /translation="MADKKSLSDLAELTKDEAPAPAPEVEAEAPAEAAPPPPAEAPVY
                     EQQLDKYGRAYATGRRKDAIARVWLKPGSGKIVVNGREQEVYFARPTLRLVINQPFDI
                     ADRRGQYDVVATVKGGGLSGQAGAVKHGISQALTRYEPALRSVVKQAGFLTRDPRVVE
                     RKKYGRAKARRSFQFSKR"
     gene            complement(3557..4036)
                     /gene="rplM"
                     /locus_tag="VHN55_02565"
     CDS             complement(3557..4036)
                     /gene="rplM"
                     /locus_tag="VHN55_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEX2802855.1"
                     /translation="MKALMKTTRSAKPAEVEKKWHLIDADGLVVGRVATIIANILRGK
                     HKPSYTPHVDCGDHVVVINADKVKFTGRKLDQKVYYKHTGYPGGLKEVTAGKVLEGRF
                     PERVLEKAVERMIPRGPLGRQQMRALHLYNGTEHPHGGQNPEVLDVASMNRKNKVGA"
     gene            complement(4160..4408)
                     /locus_tag="VHN55_02570"
     CDS             complement(4160..4408)
                     /locus_tag="VHN55_02570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802856.1"
                     /translation="MNPILLRFVYFHRSRGRVLALPGYRHYRLDGAGKINRAEWLDAP
                     NDEEAIAQVRKLRLGAPSEIWNGNRLVARVDASSKRSR"
     gene            4521..5240
                     /locus_tag="VHN55_02575"
     CDS             4521..5240
                     /locus_tag="VHN55_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX2802857.1"
                     /translation="MITAHLNKLKLRTAISHEEEQVVRGLVASTRRLAPNDVVVRAGD
                     ILNSSMLLLDGWLVRSKDVANGDRQVLEIHLTGDFADLHGFTLKRLDHDLVAVSECVV
                     ATVPHERLMDLTEQHPRLARIYWLSTNVDAAITRETALSLGQRSAISRMAHLFCELHV
                     RLGVVGKARENGFEFPLTQRELSQCLGLTVVHVNRTLQELRRRQIVETENRFIKILDK
                     RALEAIGEFDPTYLQLERRTL"
     gene            complement(5237..5560)
                     /gene="cutA"
                     /locus_tag="VHN55_02580"
     CDS             complement(5237..5560)
                     /gene="cutA"
                     /locus_tag="VHN55_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEX2802858.1"
                     /translation="MSIVSVYAVFADLGEAERIGRTVVEERLAACINILGGCRSIYRW
                     EGAIETADEVPAILKTDSCRADALIERIAALHSYDTPCITAWPVEKVLQRYGDWVEDS
                     SARGS"
     gene            complement(5557..6606)
                     /locus_tag="VHN55_02585"
     CDS             complement(5557..6606)
                     /locus_tag="VHN55_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020820654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEX2802859.1"
                     /translation="MARQQIRPAGGLRERPFAIANLLLLTAGLVFAMVVIGGITRLTE
                     SGLSITEWKPVTGTIPPLTHQDWVRAFDLYKQTPQYREVAGPSGMDLAGFKFIFFWEW
                     LHRFLGRFVGLVFFAGVAWFAWKRAIPRGFIWRLVALFVLGGLQGAVGWLMVMSGLEG
                     RTEVSPYRLAAHLLFALFLFAALIWTALDLRSIGKDRDAKPSRLTGFSVVALTILFVQ
                     LLLGAWVAGFRAGYVSNTWPLMNDHFIPEGIDWSNGIAAAFTHDPFLLHFLHRWWAWV
                     LVAVLVVFARKVRAAGQRPVSIAIHSAFGTQIILGIATVMSGMAIWVAVLHQAVGALV
                     VASTVWGAHVLGRRP"
     gene            6695..7075
                     /locus_tag="VHN55_02590"
     CDS             6695..7075
                     /locus_tag="VHN55_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerC domain-containing protein"
                     /protein_id="HEX2802860.1"
                     /translation="MPAAMVAILAQPGRLDRLAIGLSGLCLVHCLATAVLLAMLASAG
                     GLLGAPIIHEVGLTLAMVLGAIALGRGGLEHGFMMPIAVGALGLGVMAGALQLPHDGT
                     EALYTMFGVGLLALGHRLNFLAAE"
     gene            7122..7592
                     /locus_tag="VHN55_02595"
     CDS             7122..7592
                     /locus_tag="VHN55_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEX2802861.1"
                     /translation="MPAHDHQIHEGDSLRKAARDHLQSKGEQWTDMRGAVFDALASFD
                     RPASAYDIAEAVSKSQDRRIAANSVYRILDLFVGANLARRVESSNAYVANQHPDCLHD
                     CIFLICDNCGQAVHIDDDKVSGGIRDAAASAGFAAKRPVIEVRGTCEDCDDPKS"
     gene            7690..9615
                     /gene="dxs"
                     /locus_tag="VHN55_02600"
     CDS             7690..9615
                     /gene="dxs"
                     /locus_tag="VHN55_02600"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008995283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEX2802862.1"
                     /translation="MPDRPNTPLLDQVKLPEDIRALDKSQLVQLADELRQEVISAVSV
                     TGGHLGAGLGVVELTVALHYVFDTPRDKLVWDVGHQAYPHKIVTGRRDRIRTLRQGGG
                     LSGFTKRGESEYDPFGAAHSSTSISSALGFAIANKLSDDPHHGIAVIGDGAMSAGMAY
                     EAMNNAAAAGNRLVVILNDNDMSIAPPVGSLRNALARLVSSGKYLAPRRIAQKLARAM
                     PEPLHVAARRMEEYARGMVTGGTLFDELGFYYVGPVDGHDVNALVEVLENVRDAEEGP
                     MLVHVVTRKGKGYAPAENAADKYHGVVKFDVVSGKQDKGPGGGPPSYQNVFGETLAKL
                     AETDPKIVAITAAMPSGTGVDKFAAAHPDRAFDVGIAEQHAVTFAAGLAAQGYRPFCA
                     IYSTFLQRAYDQVVHDVAIQNLPVRFAMDRAGLVGADGATHAGSFDLAYLCTLPNFVV
                     MAAADEAELANMVKTMAEHDSGPIAVRYPRGEGRGVALPAVPKALEIGKGRIVRQGSK
                     VAILSLGTRLEEAEKAADQLEAKGLSTTVADLRFAKPLDEALIRKLLTTHEVAVTVEE
                     ASIGGLGAHVLTMASDEGLTDGGLKIRTMRLPDRFIDQDKPEKQYDEAGLNAPQIVDT
                     VLKALRSNSAGVEEVRA"
     gene            9621..10349
                     /locus_tag="VHN55_02605"
     CDS             9621..10349
                     /locus_tag="VHN55_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEX2802863.1"
                     /translation="MRADQLLVSRGLAESRSRAQALIMAGAVFSGERKLAKAGEMLAD
                     DAPLEVRGKDHPWVSRGGIKLAHGLDHFGFDVTGAVALDVGSSTGGFTDVLLSRGAAK
                     VYAVDVGTNQLAWKLRQDERVILHEKTNARHLDSSIISEPVDIVTCDASFISLSKVLE
                     SPLKLARKDAKLVALVKPQFEAGRDEVGKGGVVRDPAVHERVCAAAADWVASQAWRVV
                     GVTQSPITGPEGNVEFLLGAIKND"
     gene            10342..10857
                     /locus_tag="VHN55_02610"
     CDS             10342..10857
                     /locus_tag="VHN55_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TspO/MBR family protein"
                     /protein_id="HEX2802864.1"
                     /translation="MIEAAAKREWWKYALVTVPAIVLLGSLSGWLSNSGYGNGWFDSL
                     DKPFFMPPGWAFGLVWPILYALLGIALAIILAEPPSDARRKALLLFFVQLALNFAWSP
                     LFFAAHWVRVALMTIFVMAAIAAMTARQFWQIRRVAGALMLPYLAWLCFAAALNAAID
                     RLNPAADSLFG"
     gene            10869..11165
                     /locus_tag="VHN55_02615"
     CDS             10869..11165
                     /locus_tag="VHN55_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEX2802865.1"
                     /translation="MQSENRLFDDFVKMVNGFAGTMAGMGREAEESAREKFREWMGGM
                     DFVSRDEFEAVKAMAAAAREENEALKARIAALEAKAGATARPKAAPKGKPGAKS"
     gene            11162..11671
                     /locus_tag="VHN55_02620"
     CDS             11162..11671
                     /locus_tag="VHN55_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010216139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HEX2802866.1"
                     /translation="MTEADVSDEREDGAPIEVLEQYFEARGWACERSGDGEIVASATG
                     SWAQYELRGVWRPEDQVLQFLAFPDIKVAPEKRQTIYEALGLMNEQLWLGHFEMWSGS
                     GLIVFRHSTVLDTRDGEGLSLEQAEAISEAALEECERFYPVFQFVLWGGKSPGEAIAA
                     ALIDTHGEA"
     gene            11671..12489
                     /gene="proC"
                     /locus_tag="VHN55_02625"
     CDS             11671..12489
                     /gene="proC"
                     /locus_tag="VHN55_02625"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEX2802867.1"
                     /translation="MIFPSPTWFVGCGNMGQAMVKGWQAAGADLSNAVAIRPSGKTVE
                     GVRTVTSLKEAGAAPRMIVLGFKPQQLDEIAPQLLPWLSSKTVVVSILAGAEAESLKA
                     RFPKAIIVRAMPNLPVAVRRGIVALYAPEDLDDDLHKQLSDLFAALGFAMWTEGESAF
                     GAIGSVAGSGPAYVARFIDALADAGEKQGLPKALAATIALETVFGTAWLAASTGESLD
                     DVARTVASPKGTTQAGLAVLDREGAFRQLIGATIEAARRRGAELAAEARGEQVA"
     gene            12571..13461
                     /locus_tag="VHN55_02630"
     CDS             12571..13461
                     /locus_tag="VHN55_02630"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008599626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEX2802868.1"
                     /translation="MADPNTYHDRDGFIWFDGKLVPWREAGVHVLTHALHYASSVFEG
                     QRAYNGKVFKLQEHSERLHRSAQMLGFEIPWSVEEINAACNEVLKANELVDAYMRPVA
                     WLGSERMGVSPTGTKPHLAIAAWEWGKYFSPEKAKNGIRLTIAPWRRPAPYTAPVHSK
                     AAGLYMIAMLSRKHAEDTGFDDALMFDWRGQVAEATGANAFFVKDGTIHTPTPDCFLD
                     GITRRTVMDLARKRGVEVVERAIWPEELEGFEQMFLTGSAAEVTPVGSVGPWSFEVGD
                     LTRQLAKDYDDLVNGRIANS"
     gene            13508..13582
                     /locus_tag="VHN55_02635"
     tRNA            13508..13582
                     /locus_tag="VHN55_02635"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13540..13542,aa:Gln,seq:ttg)
     gene            13629..13985
                     /locus_tag="VHN55_02640"
     CDS             13629..13985
                     /locus_tag="VHN55_02640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802869.1"
                     /translation="MSIVDWSIEPKTPRARFGIALGCLAALALALPLLFLSMASAAIP
                     HCKTCGANLGLQMFVGLLIAIVFGGVMGVIAAFARQSLRRMLGPVGATAALLLVIAAT
                     AFMCLEPALRFVTSIN"
     gene            14001..15086
                     /locus_tag="VHN55_02645"
     CDS             14001..15086
                     /locus_tag="VHN55_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010235425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX2802870.1"
                     /translation="MPGPLEGLTIIEMAGIGPAPFAGMMLADHGAEVIRVERDGLIGI
                     PNDPLLRSRRSIALDLKQEAAREIVRKLAARADGLVEGHRPGVMERLGLGPDTLLSEN
                     AKLVYGRVTGWGQEGPLAAEAGHDIDYLAITGLLHGIGPKERPVVPVNYLADFAGGGM
                     MLAFAMVAALLDVRRGGAGQVIDCAMADGAALIGALTYGMRAAGLWIDEREANLLDGG
                     DACYGVYRCSDGKFLAVGALEPQFRAALFGCLGLAQDAGKEEVAGAIATRSRDEWVEN
                     FAGADACVAPVLSLEEAPAYPHNRARGAFVELDGIVQPGPAPRYSRTATAKPSPPRPG
                     ADGAAILAELGYSDEEIGELRSEGALL"
     gene            15083..16237
                     /locus_tag="VHN55_02650"
     CDS             15083..16237
                     /locus_tag="VHN55_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEX2802871.1"
                     /translation="MNPLYEQMQTSVFERMSGLAAKHGAVNLGQGFPDFGWPDEILDS
                     AARALKSGSNQYAPSRGLPQLREAIAGHYNRLFGEDLGPDHICVTSGATEALAACILA
                     TVTPGDEVIVFTPAYDSYAPMIRRAGAIVREIALRPPEWRIERESVEAAIGLKTRAIL
                     FNNPHNPTGRLFGADELAIVADAARAHDLIVISDEVWEHILLDRQAFTPLATLPGMAA
                     RTLKIGSAGKIFSLTGWKVGWIAAAPELASVAARAHQFLTFSTAPNLQSAVAFGMAQG
                     DGWIEPMRQRFARARDRLLSGLEAAGYAALRPASTYFLCVDLKQSGIACGDEAFAAAA
                     VEKAGVAVVPVSAFAEQEPPRHIVRLCFAKRDQTLDAGIAAMAKAKSLFT"
     gene            complement(16242..17042)
                     /locus_tag="VHN55_02655"
     CDS             complement(16242..17042)
                     /locus_tag="VHN55_02655"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2802872.1"
                     /translation="MIGRTEKSLLREFERALDRGELHMVYQPKVNLDTGALTRLEALV
                     RWDQPELGEVQPSRFVPLAEKHGLIAPLTDWGLRTTLTQWRNWRDQGLDTNVAFNISA
                     LSLQSLDFPDLVERVCNELDVPADRLVLELTEGATQPLIKLMDTLTRFRIKGIGLAID
                     DFGTGYSSLMQLRQLPFTEVKIDRLFVKDLPNAHDSCVIVKAIVELAHGLGLQATAEG
                     VETAEQLRFLRSTGCDVAQGFLIAEPLEPDSLHRWVTDFSARWPQLTG"
     gene            complement(17039..17428)
                     /locus_tag="VHN55_02660"
     CDS             complement(17039..17428)
                     /locus_tag="VHN55_02660"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2802873.1"
                     /translation="MRQPRLLVIDDEPALAEFVAHVARECGFVPILTADDRAFRDAVL
                     AEEPDMVALDLGMPGMDGVELLRFLAAEDHRAPVLIISGFDRRVLESAFRLGEALGLT
                     MVGPLEKPVTFHELERVLTHMRSSIVQ"
     gene            17545..18246
                     /locus_tag="VHN55_02665"
     CDS             17545..18246
                     /locus_tag="VHN55_02665"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2802874.1"
                     /translation="MFSSIIRRKRGQSLADDQAAFESTTFSLSTAVPRPGERRTGDRL
                     IPLLKVSKLVSESGERLIRVRNISAGGVMAEVSECPPVGEHVSVELSSQKIPSTVVWV
                     RDGLVGLKFDQNVDLGELLAGRKPRHGFRPRPPRLNVHCKASVRLGSVYYTVEVHDIS
                     LAGMKVEPIEEYCVGREVTVVVESLRPIKGEVRWFSDRRAGIVFKKPLDFDELAEWVA
                     KRLEVASLKASYKTE"
     gene            18306..18854
                     /gene="msrA"
                     /locus_tag="VHN55_02670"
     CDS             18306..18854
                     /gene="msrA"
                     /locus_tag="VHN55_02670"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX2802875.1"
                     /translation="MADEVAILAGGCFWCTEAVFNDVVGVKSVESGYTGGKVANPTYD
                     QVCGGDTGHAEAIRITFDPDVLGYGELLDIFFAVHDPTQLNRQGNDVGTQYRSAIFPQ
                     DEAQEKEARRAFDRAEAHWDGRVVTTIEPRSEWWPAEDYHQSYWEGEGRSNPYCIASI
                     PPKLQKLRKSFQARVKGQPAAS"
     gene            complement(18851..19765)
                     /locus_tag="VHN55_02675"
     CDS             complement(18851..19765)
                     /locus_tag="VHN55_02675"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEX2802876.1"
                     /translation="METRNLPFDEDAIAEAARLVLAGEAVAVPTETVYGLAADATNAR
                     AVARIYEAKRRPDFNPLIVHVSSFDEAQEIAEFGRYGRHLAAEYWPGPLTIVAPLKPG
                     SGIASIVTAGLPTVGIRVPAHRAIRALLAAVGRPLAAPSANASGSISPTRAEHVLRSL
                     GGRIPLVIDDGPCPGGIESTIVAETDGKLRLLRRGPITIADARIAAEGKIEAPGQLAS
                     HYAPTKPVRPNAKSAREGEYLIGFADVEGDSNLSPSGDLVEAAARLFDLLHQADESPK
                     PEIAIAPVPGTGLGAAINDRIRRAAAPR"
     gene            complement(19784..20140)
                     /locus_tag="VHN55_02680"
     CDS             complement(19784..20140)
                     /locus_tag="VHN55_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX2802877.1"
                     /translation="MTLRTNHEKPVYVRLRETIANAILAGRYKDGDPLPSVRALAAEE
                     QANPLTVAKAYQGFQDDGLIVVKRGVGLFVAPGARTRLKDSERSRFLDEEWPEIRARM
                     DRLGIDPAELLDRASA"
     gene            complement(20188..20772)
                     /locus_tag="VHN55_02685"
     CDS             complement(20188..20772)
                     /locus_tag="VHN55_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX2802878.1"
                     /translation="MLNDRSSLVSLLKTRRSAKPRMMADPGPTRQELEEILTIASRTP
                     DHGKLHPWRFVIVEHDQRKALATVLHDALSKENPAAADAHHNKEEEFAHYGGALVILV
                     SAPVRGHKIPVWEQELSCGAAGMNLLTAASALGFAAGWVTGWRAYSPLVTAEFCEPGQ
                     RIAGFIFIGRSSVELEERQRPRLDDLVTRWAPDR"
     gene            20887..22758
                     /locus_tag="VHN55_02690"
     CDS             20887..22758
                     /locus_tag="VHN55_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010408020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEX2802879.1"
                     /translation="MKPIGMWNEGDWTVVVTLGVFSLFIIAGLLIAARREPEAIGHPK
                     GLYMLFFAEMWERFSYYGMRALLIFYLTQHWLFSDGRSNLIYGAYTSLVYITPVLGGY
                     LADRYLGQRRAVLFGGILLMCGHFLMAIEGDGGQNDPTINVFWAALAFIIVGSGFLKA
                     NISVMVGQLYSLTDKRRDPAYTIFYMGINVGAAVGTILVGYLGVTVGWPFGFGLAGLG
                     MLAGLVVFVLGRSSLRGAGEAPKPLTKGTEWTLYAVGVAAVAIVWGLIQYQDVIQTLL
                     VYSGTILLAYVAMEATFRIPYGSLGNAPQGRLWMMGIGVLLMLVQPVATTFDLAIAGN
                     DLGGGLPTSAWVMIVGFLVILASMALEKFSRDDHSRDRLYAILFLISLNPIFWGLFEQ
                     AGGSINLYTDRFVAIGDVPAPIFQSINPIYIILLAPLFTILWTWLGKRDLEPSAPAKF
                     ALALFQVGAGFLVFVWGATAFPVGPEAKTAVLFVFLLYLLHTTGELCLSPVGLSAMNR
                     LAPTFMASLIMGAWFYMTAVGNFVAGKIGEATGGESGEMTKEMTLSIYSTIGWWTVGI
                     GVVVLALSPIVKGWMHLDTLRDDDRLAGRGELAEPQAPGLHPEREEDPEGGPRPERT"
     gene            22758..>23358
                     /locus_tag="VHN55_02695"
     CDS             22758..>23358
                     /locus_tag="VHN55_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX2802880.1"
                     /translation="MRAFAVAATAAIAVAAAGCAANTPPKKAAPVVRVDEDPFPSTYV
                     AYPGVPTLIRNVTIFDGEGGRIDNGWISFADGQVTGLGAGPQDAPAGTNVIDGSGKFV
                     TPGIIDVHSHLGDYPSPGVESLSDGNEATSPVRPEVWAEHSVWPQDPGFSRALINGGV
                     TTLQVLPGSANLFGGRSVVLKNVPARTVQGMKFPGAPYGL"
BASE COUNT         4014 a         7367 c         7723 g         4254 t
ORIGIN      
        1 ggcccgatcc ttgggccggt gctcggcggc tggctgaccg acagctacaa ctggcgctgg
       61 gtgttcctcg tcaacttgcc ggtcggaatc ctgtgctttt tcctgatgct ccagttcctt
      121 ccgacaaccg aaaggcacaa gcgccggttc gacaagttcg gctttgcaat gctcgcaatc
      181 gcgttggccg cgcttcagat gttcctcgac cgcggccatc agaaggattg gttcgacagt
      241 tgggagatca taatcgaggc gggcctggcg gtcggcgcct tctggatgtt cgtcgtccac
      301 accgtcaccg ccaagcagcc gttgttcgag cgggaaatct tcagcgaccg caatttcgcg
      361 acgtcgctcg tcttcatggt gattaccggc gtgctgctcc ttgccggcct cgccttgctg
      421 ccgccgctgc tccagaacct ttacggctat tcggtgctgc agtcggggta tctcacggcg
      481 ccccgagggg tcgggacctt gatctcgatg ctcctggcgg ggcggctggt cggcaaagtg
      541 gattcccggg tgctcgttgg aatcggagta atcctgatgg gcgtgtcgct gtggatgatg
      601 actggattcg cgatcgacca gccgtcgcgg ccggtgatcg tcagcggggt cgtccagggc
      661 cttggcctcg gcctcatctt cgttcccctg cagacgcttg ctttcgtcac cttgtcggtg
      721 cggcaccgga ccaccggcgc ctccctcctc aatcttgccc gcaacgtcgg tggctcggtc
      781 gggatctcga tcgtcagcgt ccagctggcg cggatggccc aggtagctca tgccgacatg
      841 gcgagccaca tcaccgacag catgatcccg acgctcgacc ccaacgtgct ccatgcgttc
      901 ggcaaccagg cgacagcggt cgcggcttac atcaacgccg agatcacccg gcaggcgctg
      961 ttcatcgcct atctcgacga cttcaagctg atgatgtggg tgacattcct cgtcctcccg
     1021 ttgcttcttc tgatgcgaaa ttccaagaca gccgcccgct aggcggcagg gtaactctcg
     1081 agcgcggccg cgagatcggc gatcaggtcg tccggcgatt cgaggccgat gtgcagccga
     1141 accgccgggc cggcccagtc gagcttgctg gcggtgcgga ccggttcggc gggaaccgcg
     1201 aggctttcga atccgcccca gctgtaaccg attccgaaca gctttagccg gtcgatcagg
     1261 cgatcgcggg atgctgagtc gcctccgttc aggacgaacg aaaacagccc tgacgagccg
     1321 ctgaagtcgc gtttccaata ttcatggccc gggcagtttt cgaaggcggg gtggaggact
     1381 cgcgatacct gcggctgctc atccagccag cgcgcaactt gcagcccgct tttctcgtgc
     1441 cgcttgagtc gaaccgcgag cgtcctgagg ccgcgagcgg taagccagct gtcgtccgga
     1501 gccgccgcat gccccagatc gaacacggtt cgctgcaccc ggtcgtacca gtcggcgttg
     1561 gcggtgatcg aacccagcag gaggtcggaa tggcctccgg catatttgct cagcgcctgg
     1621 atgctgatgt cggcgccgtg ggcgatcgcc gggaagagga ggggcgtcgc ccaggtgttg
     1681 tcgagcacgc tggcgatccc gcgccgcctc gccatcgcgc agattcccgg aacgtcctgc
     1741 acttcgaagc tgagcgaccc ggggctttcg aggaagatcg cccgagtgtt gtccgcggcc
     1801 agggattcca gctcgtcggc gctcgcgagc gggtcgtagt agcgggtggc gatccccaac
     1861 cgggtcagca catcgtcgca gaagcgccgg gtcggccaat aggcgctgtc gaccatcagc
     1921 aactcatcgc cgcattcgag gacggccatc agcgcggccg tgaccgccgc gagcccggtt
     1981 tcgacgagag ccgttcccgc ggcgccgggc tcgagctcgg tcaacgcctc agcaagcgcc
     2041 cactgagtcg gccagccatg aaggccgtaa tagtggctgt cgatccccgg cttcgcactg
     2101 cgaagctcgg cgacgctgtc gaacaggacc gtcgagccgc gatcgaccgg gacgttgacg
     2161 agcttgcccg tccagcgctt gagccgaccg ccggtcacca gccgagtatc gacatgcttc
     2221 ttgtcgtcgc gcacgccgct cccttatccg ctccttcagc catgggccat atcgcaatca
     2281 gggtgactcc acgctcatcg aagccgggta ttggcggctg gagggcgagc ggcgacgggc
     2341 gcgaggagct ggaggtccgg gtcgcagaag cgccggccga cggggccgcg aacgcggccg
     2401 tggtgaccct ccttgccaag gcgctgtcgc tcccacgctc gcagctggag atcgtcgccg
     2461 gccactccag ccgccacaag cggcttgcgc tcccgctcga gccggacgag gttcgctcca
     2521 ggctcaaggg ctaggtcgaa tggctgaaaa caagacgaag ccgactgctc aggacgtgcc
     2581 gggctttctt gacggcgtgc cggacccgaa gcgccgcgag gatgcgagag cgctctgccg
     2641 actgatggca agggaaacgg gtgagccgcc ggtcttgtgg ggaccgagta tcatcggctt
     2701 cggtagctat cattaccgct acgcgagcgg tcacgagggc gacgccccgg ttgtcggctt
     2761 ttctccccgc gccagggagt tggtcctata cctctattgt catggggaat ggagcgatga
     2821 gctgctcgca aggctcggga ggcacagaac cgggaaggcc tgcctctaca tcaagtcgct
     2881 ggcggacgtg gacgaagcga ctctcgtcga actgatcagg ggttcggcgg cggagatccg
     2941 caagcgctat caggggacaa catagcaaaa gggcggcccg gacacccgag ccgcccttcg
     3001 cgtgacgttc cgttggtgct ttaccgcttc gagaactgga agcttcggcg ggccttggct
     3061 cgtccgtact tcttgcgctc gacgacgcgc gggtcgcggg tcaggaaacc ggcctgtttg
     3121 acgacgcttc gaagcgccgg ctcatagcgg gtgagtgcct ggctgatgcc atgcttgacc
     3181 gcgccggcct gcccggaaag accgccgccc ttgacggtcg cgacgacgtc atactggcca
     3241 cgacggtcgg cgatgtcgaa cggctggttg atcaccaggc gcagggtggg gcgggcgaaa
     3301 tacacttcct gctcgcggcc gttgaccacg atcttgccgg agccgggctt cagccacacg
     3361 cgggcaatgg cgtccttgcg tcggccggtt gcgtaggcgc gaccgtactt gtcgagctgc
     3421 tgctcgtaaa cgggcgcttc cgccgggggc ggcggggcgg cttcggcagg agcttcagcc
     3481 tcgacttcgg gggccggcgc cggagcttcg tccttggtca gctcggcgag atcggaaagg
     3541 gacttcttgt cggccattat gcgcccacct tgttcttgcg gttcatcgac gcgacgtcga
     3601 ggacttcggg attctggccg ccgtgcggat gctcggtgcc gttgtagagg tgaagggcgc
     3661 gcatctgctg gcgcccgagc gggccgcgcg ggatcatccg ctcgaccgct ttttcgagaa
     3721 cgcgctcggg gaagcgtccc tcgagcacct tgcctgccgt gacttccttc agcccgcccg
     3781 gatagccggt gtgcttatag tacactttct ggtcgagctt gcggccggtg aacttcacct
     3841 tgtcggcgtt gatgacgaca acatggtcgc cgcaatcgac gtgcggggtg tagctcggct
     3901 tgtgcttgcc gcgcaggatg ttggcgatga tggtcgcgac tcgcccgacg accaggccat
     3961 cagcgtcgat caggtgccat ttcttctcga cctcggccgg ctttgctgac cgggtcgtct
     4021 tcatcagcgc cttcatggcg ttgatccttt cgttgaaatg cgaaaggcga cgcctggaag
     4081 cgtcgccgct gggggccgct atttgccgcc gaaggcgtga aagtcaagga aatgccggac
     4141 tttcatgacg ggtataatac taccgggaac gctttgacga ggcatcgacc cgcgccacca
     4201 ggcggttgcc gttccagatt tccgaaggcg cgccgagccg gagcttgcgg acctgggcga
     4261 tcgcttcttc atcgttgggc gcatcgagcc attcggccct gttgatcttc cccgctccgt
     4321 cgagccgata atgcctgtac cccggcaacg cgagaaccct ccccctggag cgatggaaat
     4381 agacgaagcg caggagaatc ggattcaccc aggttacaag aaggtacagt taggctttta
     4441 gaaacatggt ttttttgcaa aacatgacgg aagcgtaatc tggcatttgc gcgaactgcc
     4501 gggtaccgca ggagactgcc atgattaccg ctcacctcaa caagctgaag ctgcggacag
     4561 cgatcagcca tgaggaggaa caggttgtcc gcggactcgt cgccagcact cggcgacttg
     4621 ctcctaacga cgtcgtggtc cgggcgggcg acatcctgaa ttccagcatg ctcctgctgg
     4681 acggctggct cgtccggtcc aaggacgtcg ccaacgggga ccgccaggtg cttgagatcc
     4741 acctcaccgg cgacttcgcc gatctccacg gcttcactct gaagcgcctc gaccatgatc
     4801 tcgtcgcggt cagcgaatgc gtggttgcga cggtgccgca tgagcggctg atggatctta
     4861 cggaacagca cccgcggctg gcgcgaatct attggctatc gaccaatgtc gatgccgcca
     4921 tcacgcgaga gacggcgttg tcgctggggc agcggtcggc gatttcgcgt atggcgcact
     4981 tgttctgcga gcttcacgtc cgcctcggcg tcgtcggcaa ggcgcgcgag aacggtttcg
     5041 aattcccgct gacgcagcgc gaactgtcgc agtgtctggg cttgaccgtc gtccatgtga
     5101 accgcacgct tcaggagctg cggcggcggc agattgtcga gaccgagaat cgcttcatca
     5161 agatcctcga caagcgcgcg cttgaggcga tcggcgaatt cgacccgacc tacctccagc
     5221 tcgagcggcg gacgctttag gagccgcgcg cgctgctgtc ctcgacccag tcgccgtagc
     5281 gctgcagcac cttctctacc ggccaggctg tgatgcaggg cgtgtcgtag ctgtgaagcg
     5341 cggcgatccg ttcgatcagc gcgtctgcgc ggcagctgtc cgtcttcagg atcgcgggaa
     5401 cctcgtcggc agtttcgatc gcgccttccc agcgatagat cgaccggcac ccgccgagga
     5461 tgttgatgca ggccgctagt ctttcttcga ccacggttcg accgatccgc tcggcctcgc
     5521 cgaggtcggc aaataccgcg tagacggaaa cgatgctcat ggccggcggc caaggacatg
     5581 ggcgccccag accgtggagg ccacgaccag cgcgccgaca gcctggtgaa gaaccgcgac
     5641 ccaaattgcc attccgctca tcacggtcgc aattccaagg atgatctggg taccgaatgc
     5701 cgaatggatg gcgatcgaaa cagggcgctg cccggcggcg cggaccttgc gcgcgaagac
     5761 caccagaaca gcgacgagca cccatgccca ccagcgatgg aggaagtgga gaaggaatgg
     5821 gtcgtgggta aaggcggcgg cgattccgtt cgaccagtcg ataccttcgg ggatgaaatg
     5881 atcgttcatc agcggccatg tgttggagac atagccggcg cgaaagccgg ctacccaggc
     5941 gccgagcagc agctgaacga agaggatcgt gagcgccacc accgagaatc ccgtgaggcg
     6001 cgagggcttt gcatcgcggt ccttgccgat cgagcgcagg tcgagagcgg tccagatcag
     6061 tgccgcaaac aggaacagcg cgaacaataa atgcgccgcg aggcggtagg ggctgacctc
     6121 ggttcgtccc tcgagccctg acattaccat cagccagccg accgcgcctt gtaggccgcc
     6181 gagcacgaac agggccacga gccgccaaat gaatcctctc ggaattgccc gtttccaggc
     6241 gaaccaggcg acacctgcga agaagaccag tccgacgaac ctgccgagga atcggtgcaa
     6301 ccattcccag aaaaagatga acttgaaacc ggcgaggtcc attccgctcg gcccagcaac
     6361 ctcgcgatac tgcggcgtct gcttgtagag atcgaaggcg cgcacccaat cttggtgcgt
     6421 gagcggcggg atcgtcccgg tcacgggctt ccattcggtg atcgagaggc cgctttcggt
     6481 gagccgagtg atgccgccga tcacaaccat cgcaaagacc agccccgcgg tcagcaacag
     6541 caaattggcg attgcgaacg gcctttcccg gagtcctccg gcggggcgga tttgctgtct
     6601 tgccatgcag caggcctatg cccgcgggct cgcacggccg gcaagtgggc tttctgcgtc
     6661 atgtgatatt gtatcgcaag aaaagggcgc ctatatgccc gccgcgatgg ttgcgattct
     6721 tgcacaaccc gggcgactgg accggctggc tatcgggctt tccggcctgt gcctcgtcca
     6781 ttgccttgct accgcggttc tcctcgccat gcttgcgagc gccggcgggc tccttggcgc
     6841 gccgatcatt cacgaagtcg gccttacgtt ggcgatggtg ctgggagcca ttgcgcttgg
     6901 ccgcggcggg cttgagcacg ggttcatgat gccgatagcg gtcggagcgc tcgggctcgg
     6961 agtcatggcg ggcgcgctgc agcttccgca cgacgggacc gaggccctgt acacgatgtt
     7021 cggcgtcggc ttgctcgccc tcgggcaccg cctcaacttc ctcgcggcgg aatagcctcc
     7081 caagcttgcc gctgccccgg cgcggctcta tcttgaaccg catgcccgca cacgaccacc
     7141 agatccacga aggcgactcg ctgcgcaagg cggctcgcga tcatctgcag tcgaagggcg
     7201 agcagtggac cgatatgcgc ggcgccgttt tcgatgcgct ggcgtcgttc gatcggccgg
     7261 ccagcgccta tgatatcgcc gaggcggttt cgaagtcgca ggaccgccgg atcgccgcca
     7321 acagcgtcta tcggattctc gacctgttcg tcggcgcgaa cctggcccgg cgagtcgaga
     7381 gctccaatgc ctatgtcgcc aatcagcatc ccgattgcct gcacgactgc atcttcctga
     7441 tctgcgacaa ttgcgggcag gccgtgcaca tcgacgacga caaggtttcc ggcggaatcc
     7501 gcgacgccgc ggcgagcgcg gggttcgccg cgaagcgtcc ggtcatcgag gtccgcggca
     7561 cttgcgagga ctgcgacgac ccgaaaagct gagcaagtcg tgagcatttg ctgaaatcgg
     7621 cggctttgtg cgatcattgc cgccgaattg gtgacacgcc cgcaggttcg ggataaggcc
     7681 gcgcccaaca tgccggaccg cccgaacacc cctctcctcg accaggtcaa gctgccggag
     7741 gacatacgcg cgctggacaa gagccagctg gtgcagcttg ccgacgagct tcggcaggaa
     7801 gtgatttcgg ccgtttccgt caccggcggc catctcggcg cggggctcgg cgtggtcgag
     7861 ctgacggtcg ccctccatta tgtgttcgac acgccgcgcg acaaattggt gtgggacgtc
     7921 ggccaccagg cctatccgca caagatcgtc actggccgcc gcgaccggat ccgaacgctt
     7981 cgccagggcg ggggcctcag cggtttcacc aagcgcggcg agagcgaata cgacccgttc
     8041 ggcgccgccc atagctcgac ctcgatttcc tccgcgctcg gcttcgcgat cgccaacaag
     8101 ctgtccgacg acccgcacca cggtatcgcg gtgatcggtg acggagcgat gagcgccgga
     8161 atggcctatg aggcgatgaa caacgctgcc gcggccggca accgcctggt ggtcatcctt
     8221 aacgacaatg acatgtcgat cgcgccgccc gttggctctc ttcgcaacgc gctcgctcgt
     8281 ctggtcagtt cgggcaagta cctcgcgccg cgccggatcg cccagaagct cgcgcgagcg
     8341 atgcccgagc cgctccacgt cgccgccagg cggatggagg aatatgcacg tggcatggtc
     8401 accggtggga cgctcttcga cgagctcggc ttctattacg tcggcccggt agacggccac
     8461 gacgtcaatg cgctggtcga agtgctcgag aatgtgcgcg acgcggaaga gggaccgatg
     8521 ctggtccatg tcgtcaccag gaagggcaag ggctacgcgc ccgcagaaaa tgcggccgac
     8581 aagtaccacg gagtcgtgaa gttcgacgtg gtctcgggta aacaggacaa gggcccaggc
     8641 ggcgggccgc cctcctacca gaacgtgttc ggcgaaacgc ttgcgaagct cgccgaaaca
     8701 gatcccaaga tcgtcgccat caccgccgcg atgccgtccg gaacgggcgt cgacaagttc
     8761 gcagcggccc acccggatcg tgccttcgac gttgggatcg ccgagcagca tgcggtgact
     8821 ttcgctgccg ggcttgccgc gcaaggctac cgcccgttct gcgcaatcta ttcgaccttc
     8881 ctccagcgtg cctacgacca ggtcgttcac gacgtcgcca tccagaacct gccggtgcgc
     8941 ttcgcaatgg accgcgccgg gctggtcgga gccgacggag cgacccacgc gggctcattc
     9001 gacctcgcat atctgtgcac cttgcccaat ttcgtggtga tggccgcggc cgacgaggca
     9061 gagctcgcca acatggtcaa gacgatggcc gagcacgaca gcggcccgat cgcggtccgc
     9121 tatccgcgcg gcgagggtag gggtgtcgcg cttcccgcag ttccaaaggc gctggagatc
     9181 ggcaagggcc gcatcgtccg ccaaggcagc aaggtcgcga tcctctccct cggcactcgg
     9241 cttgaggaag cggagaaagc cgccgaccag ctcgaggcga agggcttgtc gaccaccgtc
     9301 gccgacctgc gcttcgccaa gccgctcgac gaggcgctga tccgcaagct tctcacgacc
     9361 cacgaagtcg cggtgacggt cgaggaagcc tcgatcggcg ggctgggagc acatgttctg
     9421 acgatggcaa gtgacgaagg tcttacggat ggcggtctca agatccgcac catgcgactc
     9481 cccgaccgct tcatcgacca ggacaagccc gagaagcaat atgacgaagc cggcctcaat
     9541 gccccgcaga tcgtcgacac ggtgctgaag gcgctccgca gcaacagtgc cggcgtcgaa
     9601 gaggtgcggg cgtagccaag attcgagccg accagctgct ggtaagccgc ggattggcgg
     9661 agagccgctc gcgggcgcag gcgctgatca tggccggcgc ggtgttttcc ggagaacgca
     9721 agctggccaa ggcgggagag atgctcgccg acgacgcgcc gctcgaagtg cgtggcaaag
     9781 accatccgtg ggtgtcgcgg ggcgggatca agctggcgca tgggctcgac catttcggct
     9841 ttgacgtcac cggagcggtg gcgctcgatg tggggtcctc gaccggcggt tttaccgacg
     9901 tgctgctctc tcgcggtgca gcgaaagtct atgcggtcga tgtcggcacc aaccagcttg
     9961 cgtggaagct tcggcaggac gagcgggtga tcctccacga aaagaccaat gcgcggcatc
    10021 tcgacagctc catcatttcc gaaccggtcg acatcgtgac ttgcgacgcc agcttcatat
    10081 cactttccaa agtattggaa tcgccactga aacttgctcg caaagatgca aaactggtgg
    10141 cgctcgtgaa gccccagttc gaggctgggc gcgacgaggt ggggaagggc ggagtggtcc
    10201 gcgatcccgc cgttcacgag cgagtctgtg ccgcggcggc cgattgggtc gcctcgcagg
    10261 catggcgcgt tgtcggcgtc acccaaagcc ccatcaccgg gcccgagggc aatgtcgaat
    10321 tcctgcttgg agcgatcaaa aatgattgaa gccgcggcaa aacgcgaatg gtggaaatat
    10381 gcgctggtga ccgtgccggc gatcgtgctg ctcggctcac tgagcggctg gctgtccaat
    10441 tccggctacg gcaacggctg gttcgactcg ctggacaagc cgttcttcat gcccccgggc
    10501 tgggccttcg gactggtgtg gcccatcctc tatgcgctgc tggggatcgc gctagcgatc
    10561 atccttgcgg agccgccgtc cgacgcgcgg cgaaaggcct tgttgctctt tttcgtgcag
    10621 ctcgcgctca acttcgcctg gtcgccgctc ttcttcgccg cgcactgggt tcgggtggcg
    10681 ctgatgacga tcttcgtcat ggccgcgatt gccgccatga ctgcacggca attttggcag
    10741 atcaggcggg tagcgggcgc gctgatgctt ccctatctgg cgtggttgtg cttcgcggcg
    10801 gctctcaacg ccgcgatcga caggctgaac ccggccgccg attcgctgtt cgggtaggga
    10861 gacagatgat gcagtccgaa aaccggctgt tcgacgattt cgtgaagatg gtgaacggct
    10921 ttgccggaac catggccgga atgggccgcg aggccgagga atcggcccgc gagaagtttc
    10981 gcgagtggat gggcgggatg gatttcgtct cacgcgacga gttcgaggcc gtcaaggcga
    11041 tggctgcggc tgcccgcgag gagaatgagg cgctgaaggc ccggatcgcg gcgcttgaag
    11101 cgaaagccgg cgcaacggcc aggcccaagg cggctccgaa gggcaagccg ggagcgaaat
    11161 cctgaccgag gccgacgtca gcgacgagcg cgaagacggc gctccgatcg aggtcctcga
    11221 acaatatttc gaggctcgcg gctgggcgtg cgagcgctcg ggcgacggcg agatcgtcgc
    11281 ttcggcgaca ggcagctggg cgcaatatga gcttcgcgga gtctggcgcc cggaggatca
    11341 ggtgctccag ttcctcgcct ttcccgacat caaggtggcg cccgagaagc gccagacgat
    11401 ctacgaggcc ctcggtttga tgaacgaaca gctctggctc ggccatttcg aaatgtggtc
    11461 gggctcgggc ctgatcgtct ttcgtcattc gacggtcctc gacacccgcg acggcgaagg
    11521 tctcagcctc gaacaggcgg aagccatttc cgaggccgcg ctggaggagt gcgagcgctt
    11581 ctacccggtg ttccagttcg tcctgtgggg cggcaagagt cccggcgaag cgatcgccgc
    11641 ggcactcatc gatacgcacg gagaagcctg atgatatttc catccccgac ctggttcgtc
    11701 ggctgcggca acatgggcca ggcgatggtc aaggggtggc aggcggcagg cgccgatctg
    11761 tcgaacgcgg ttgcaatccg ccccagcggc aagacggtcg agggcgtccg cacggtcacg
    11821 tcgctaaagg aagccggcgc tgcgccgcgg atgatcgtgc tcggcttcaa gccgcagcag
    11881 ctcgatgaaa tcgcgccaca gctccttccc tggctgtcgt cgaaaacagt cgtcgtttca
    11941 atcctcgcgg gagcagaggc ggagagcctg aaggcgcgct tccccaaggc tatcatcgtg
    12001 cgggcgatgc ccaaccttcc cgttgccgtc cgccggggga tcgtcgcgct ttatgcgccg
    12061 gaggacctcg acgacgacct gcacaagcag ctgtcggacc tgtttgcggc gctcggcttc
    12121 gccatgtgga cggaagggga aagcgccttc ggtgcgatcg gatcggtcgc cggctccggc
    12181 ccagcctatg tcgctcgctt catcgacgcg ctcgccgacg cgggcgaaaa gcaggggctt
    12241 cccaaagcgc tcgcagcaac gatcgctctc gaaacggtgt tcggcaccgc ctggctggcg
    12301 gcatcgacag gcgagagcct ggacgatgtc gcccggaccg tggccagccc gaagggcacc
    12361 acacaggcgg gacttgcggt gctggacaga gagggcgcct tccgccagct gatcggcgcc
    12421 acgatcgagg cggcgcggcg ccggggcgcc gaactcgccg cggaagcccg cggagagcag
    12481 gtcgcctgag ttgcgggcag gcgaagtctc ccggacattc ttcctccccc caacttgccg
    12541 ggcgcggact gctaacgtag gcggtctgcc atggcagacc cgaacactta ccacgaccgc
    12601 gacggtttca tctggttcga cggcaagctg gttccgtggc gcgaggcagg ggtgcacgtc
    12661 ctcacccatg ctctccacta tgcctcgtcg gttttcgagg ggcagcgcgc ctataacggc
    12721 aaggttttca agcttcagga gcatagcgag cgcctgcatc gaagcgccca gatgttgggc
    12781 ttcgagatcc cttggagcgt cgaggagatc aacgctgcgt gcaacgaggt gctcaaggcg
    12841 aacgagctgg tcgacgctta catgcgcccg gttgcttggc tcggctcgga gcggatgggc
    12901 gtatcgccga ccgggaccaa gccgcacctg gcgattgcgg cctgggaatg gggcaaatac
    12961 ttctcccccg agaaggcgaa gaacggaatc cggctgacga tcgcaccgtg gcggcggccg
    13021 gcgccctaca ccgcgccggt gcattccaag gccgccggcc tgtacatgat cgcgatgctg
    13081 tcgcggaaac atgcggaaga caccggcttc gacgacgcct tgatgttcga ttggcgcggt
    13141 caggtggcgg aagcgacggg agcgaacgct ttcttcgtga aggacggcac gatccacacg
    13201 ccgacccccg attgcttcct cgacgggata acccgcagga cagtgatgga cctcgcccgc
    13261 aagcgcggtg tcgaagtggt cgagcgagcg atctggcccg aggagctgga gggcttcgag
    13321 cagatgttcc tgaccggtag cgcggccgag gtcactccgg tcggctcggt cggcccgtgg
    13381 agtttcgagg tcggcgacct gacgcgccag ctcgcgaagg attacgacga cttggtcaac
    13441 ggccggatcg ccaactccta aggcctttca agtccgacga gggcggctat atgcgccgct
    13501 gtgctgctgg ggcgtcgcca agtggtaagg cagcggcttt tggtgccgcc attcgcaggt
    13561 tcgaatcctg ccgccccagc cagcctgcgc gtacggaaga tcgccgcagg ccggggcggg
    13621 ggcttcgaat gagcatcgtc gactggtcta tcgaaccaaa gacgccgcgg gctcgctttg
    13681 gcattgcgct gggatgtttg gcggctttgg cactcgcgct gccgctgctt ttcctctcga
    13741 tggcctcagc cgcaattcct cactgcaaga catgcggcgc caacctcggc ctgcaaatgt
    13801 tcgtcggtct gttgatcgcg atcgtttttg ggggcgtgat gggtgtgatc gctgcattcg
    13861 cacggcaatc gctgcgtcgc atgctgggcc cggtcggcgc aacggccgcc ctgttgctcg
    13921 tgatcgctgc gacggcattc atgtgcctgg aaccggctct tcgatttgtc acgagcatca
    13981 actagtgcat gaatggcgcg atgccggggc cgcttgaggg actgacgatc atcgaaatgg
    14041 ccggcatcgg cccggctccg ttcgccggaa tgatgctcgc cgatcacggc gccgaagtca
    14101 tccgcgtgga gcgcgacgga ctgatcggga ttcccaacga tcccctgctt cggtcgcggc
    14161 ggagcatcgc gctggacctg aagcaggagg cggcgcgcga gatcgttcga aagctcgccg
    14221 cgcgggccga cgggctggtc gaaggtcatc gcccgggagt gatggagcgc ctgggactcg
    14281 ggcccgacac gctgctgagc gagaatgcga agctggtcta cgggcgggtg acgggctggg
    14341 ggcaggaagg tccgctcgcc gccgaagccg ggcacgatat cgactatctt gccatcaccg
    14401 gccttctgca cggaatcggg ccgaaggagc ggccggtcgt gccggtcaac tatctagccg
    14461 acttcgccgg cggcggaatg atgctcgcct tcgcaatggt cgcggcgctg ctcgacgttc
    14521 ggcgcggcgg ggcagggcag gtgatcgact gcgcgatggc cgacggggcg gcgttgatcg
    14581 gcgcattgac ctacgggatg cgggcggcgg gcctgtggat cgacgagcgc gaggcaaacc
    14641 tgcttgacgg aggcgacgcc tgctacggag tttatcggtg cagcgatggc aagttccttg
    14701 cggttggcgc cctggagccg cagtttcgcg ccgctctctt cggctgcctt ggactcgcgc
    14761 aggatgccgg aaaggaggag gttgcaggag caatcgccac gcgcagccgc gacgaatggg
    14821 tcgaaaattt cgccggggca gatgcctgcg ttgccccggt cctaagtctg gaggaggcgc
    14881 cggcgtatcc gcacaaccgc gcgcgcggtg cgttcgtcga gctggatgga atcgtccagc
    14941 ccggaccggc gccgcgctat tcgcggactg cgaccgccaa gccctcgcca ccgcgaccgg
    15001 gtgcggacgg agcagcgatc ctggctgagc tgggctattc ggacgaggag atcggcgagt
    15061 tgcgaagcga gggagcgctc ctttgaaccc attatacgag cagatgcaga ccagcgtctt
    15121 cgagcgtatg tcggggctcg ctgcgaagca cggcgcggta aacctcggcc agggctttcc
    15181 agatttcggc tggccggacg agattctcga ttcggccgcg cgcgctctca agagcggctc
    15241 gaaccaatat gcgccgtcgc ggggtctgcc ccaattgagg gaggcgatcg cgggccatta
    15301 caaccgattg ttcggcgagg accttggccc ggatcacatc tgcgtcacct ccggggcgac
    15361 cgaagcgctg gctgcctgca tcctggcaac ggtgactcct ggcgacgagg tgattgtctt
    15421 caccccagct tacgacagct atgcgcctat gatcaggcgg gcaggggcga tcgtccgcga
    15481 aatcgcgctc cggccgcccg aatggcggat cgagcgcgag tcggtcgagg cggcgatcgg
    15541 cctgaagacc cgcgcgatcc tattcaacaa tccgcacaac cctaccgggc gcctgttcgg
    15601 cgcagacgag ctcgcaatcg tcgccgacgc tgcgcgagcg cacgatctca tcgtgatcag
    15661 cgacgaagtg tgggagcata tcctgttgga tcgccaggcg ttcactccgc ttgcgactct
    15721 gccgggaatg gccgcgcgga cgctgaagat cggctcggca ggcaagatct tctcgttgac
    15781 tggctggaag gtgggctgga tcgccgccgc tccggagctc gcgagcgtcg cggcgcgcgc
    15841 tcaccagttc ctgacattct cgacagctcc caacctgcag tcagccgtcg cattcgggat
    15901 ggcccaaggc gacggctgga ttgagccgat gcggcaacgc ttcgcgcgcg cccgagaccg
    15961 gttgctgtcg gggctcgagg cggcgggata tgcggccctc cgtcccgcct cgacctactt
    16021 cctgtgcgtc gacctgaaac agtccggaat cgcttgcggc gacgaagcgt ttgccgccgc
    16081 tgcggtcgaa aaggccggag tggcggttgt gccagtgtcc gcattcgctg agcaggagcc
    16141 gccccgccat atcgtccgcc tgtgcttcgc caagcgtgac cagacgctgg acgccggcat
    16201 tgccgcaatg gcgaaagcga agtcgctgtt tacgtaaccg tttagccggt cagttggggc
    16261 caccgagccg agaaatccgt cacccatcgg tgaagcgaat ccggctcgag cggctcggcg
    16321 attaggaagc cctgggcgac gtcgcagccg gtcgagcgaa ggaaccgaag ttgctccgcc
    16381 gtctcgacac cctctgcagt cgcctgcagg ccgaggccgt gcgcgagctc gacgatcgcc
    16441 tttacgatga cgcagctgtc gtgcgcgttc ggaaggtcct tcacgaacag gcggtcgatc
    16501 ttcacttcgg tgaacggcag ttgtcgaagc tgcatcagcg acgaatagcc ggtcccgaaa
    16561 tcgtcgattg cgaggccgat acccttgatc cggaaccggg tcagcgtgtc catcagcttg
    16621 atcagcggct gggtcgcgcc ttcggtaagc tcgagcacga gccggtcggc ggggacgtcg
    16681 agctcattgc agacccgctc gaccaggtcg ggaaagtcga ggctctggag gctcagcgcc
    16741 gagatgttga aagcgacgtt ggtgtccagt ccctggtcgc gccaattgcg ccactgggtc
    16801 agcgtggtcc gaagccccca gtcggtaagc ggcgcgatga gcccatgctt ttcagcgagc
    16861 gggacgaagc gcgacggctg gacctcgccc agctcgggct ggtcccatcg caccagcgcc
    16921 tccagccggg tcagtgcgcc ggtgtcgagg ttgaccttgg gctggtagac catgtggagc
    16981 tcgccgcggt cgagggcccg ctcgaactcg cgaagcagcg acttttcggt tcgtccgatc
    17041 attgcacgat gctggaccgc atgtgcgtca gcactcgctc gagctcgtgg aaagtcaccg
    17101 gcttttcaag cggcccaacc atggtcagcc ccagcgcttc gccgaggcgg aatgccgatt
    17161 cgaggacccg ccggtcgaat ccgctgatga tcagaaccgg cgctcgatgg tcttcggcgg
    17221 caaggaagcg aagcagctcg accccgtcca tgccgggcat tccaaggtcc agagcgacca
    17281 tgtccggctc ctcggcgaga accgcgtcgc gaaaggcgcg atcgtcggcg gtcaggatcg
    17341 gaacgaaccc gcactcccgc gccacgtgcg cgacgaattc ggcaagcgcc ggttcatcat
    17401 cgatcacgag cagccgtggc tgcctcatcc gtcactcctc gcagacagtg gcgctttgcg
    17461 cccgcggagt gcggaaggaa accgcttttt aaccgtaatc cgtccaaaat aaggacagac
    17521 gagctcaaac cgggaagacc gttgatgttt tcatcgatta ttcgccgaaa gcgtggccag
    17581 tcgctggccg acgatcaggc ggcgttcgaa tcgacgacct tttccctgag cacggccgtg
    17641 ccccggcccg gggagcgccg taccggtgac cggctgatcc cgctgctcaa ggtgtccaag
    17701 ctggtgagcg aaagcggcga gcggctgatt cgagtccgca atatctccgc tggtggggtg
    17761 atggccgaag tcagtgagtg cccgccggtt ggcgagcatg tttcggtcga actgtcgtcg
    17821 cagaagatcc cgtcgaccgt cgtctgggtg cgcgacggtc tcgtcggact gaaattcgat
    17881 cagaacgtcg atcttggcga gctgctcgcc ggccgcaagc cgcgccacgg ctttcgtccg
    17941 cgcccgccgc ggctcaacgt ccattgcaag gcgtccgtcc ggctcggcag cgtctattac
    18001 accgtggagg tgcacgatat ctcgctcgcg ggcatgaagg tcgagccgat cgaggaatat
    18061 tgcgtcggcc gcgaggtcac ggtcgttgtc gagagcctgc ggccgatcaa gggcgaggtt
    18121 cgctggttct ccgatcggcg cgccggaatt gtcttcaaga agcccctcga cttcgacgaa
    18181 cttgcggaat gggttgccaa gcggctcgag gtcgccagcc tgaaggcgag ctacaagacc
    18241 gagtagccct actcgaaatc gacatcggga aggcttatct cgcacgtctt caaaggagac
    18301 tggcgatggc tgacgaggtc gcgattctgg ctggcggctg cttctggtgc accgaggccg
    18361 tgttcaacga tgtcgtcgga gtgaaatccg tcgagagcgg ctacaccggc ggcaaggtcg
    18421 ccaacccgac ctacgaccag gtctgcggtg gcgacaccgg ccatgccgag gccatccgga
    18481 tcaccttcga cccggacgtc cttggctatg gcgagcttct cgatattttc ttcgcggtcc
    18541 acgacccgac ccagctcaac cgccagggga acgacgtcgg cacgcaatat cgctcggcga
    18601 tctttcctca ggatgaggcg caggagaaag aggcgcggcg cgctttcgac cgggccgagg
    18661 cccactggga tggccgtgtc gtcaccacga tcgaaccgag gtccgaatgg tggcccgccg
    18721 aggattatca ccaatcctat tgggagggcg aagggcggag caatccttat tgcatcgcca
    18781 gtatcccgcc caagctgcag aagttgcgaa agagcttcca ggcgcgggtg aagggccaac
    18841 cggccgcttc ctagcgaggg gctgcggccc ggcggattcg atcgtttatg gcggcgccga
    18901 ggccggtgcc gggaaccggc gcgatggcaa tttccggctt gggcgattcg tccgcctggt
    18961 gaagcaggtc gaacagccgg gcggccgcct cgactaggtc gcccgacggg ctcaggttcg
    19021 aatcgccttc gacgtcagcg aagccgatta gatactcgcc ctcgcgcgcg ctcttggcgt
    19081 tgggccgaac gggcttggtc ggggcatagt ggctggcgag ctgccccgga gcttcgatct
    19141 tgccttctgc ggcgatcctc gcgtccgcga tggtgatcgg gccccgacga agcaggcgca
    19201 gcttcccgtc cgtctcggcg acgatcgtgg attcaatccc gccggggcag gggccgtcgt
    19261 cgatgacgag cgggattcgg ccgccgaggc ttcgaaggac atgctcggcc cgggtcgggc
    19321 tgatcgatcc gctggcgttg gccgagggcg ctgcaagcgg ccggccgacc gcagcgagca
    19381 gcgcccgtat cgcccggtgc gcgggaactc gaatgccgac agtgggaagc ccggccgtca
    19441 cgatcgatgc gattccgcta ccgggcttga gcggcgcgac gatcgtcagc gggcccggcc
    19501 aatattcagc ggcgagatgc cgcccgtacc gcccgaactc cgcgatctcc tgcgcttcat
    19561 cgaagctgga aacgtggacg atcaatgggt tgaagtccgg tcttcgcttg gcttcgtaaa
    19621 tgcgcgcgac agcccgggcg ttcgtcgcat cagccgctag tccgtagacg gtttccgtcg
    19681 gcaccgcgac cgcctcgccg gcgagcacca gccgcgccgc ctcggcaatc gcatcctcgt
    19741 caaaaggaag attccgcgtc tccatggacg cggcaaatag agactaggcg ctcgccctgt
    19801 cgagcaactc ggcgggatcg atcccgagcc ggtccattcg cgcccggatt tcgggccact
    19861 cctcgtccag gaaacggctg cgttcggaat ccttcaaccg ggtgcgtgct ccgggagcga
    19921 cgaacaagcc gacgccgcgc ttgacgacga tcaggccgtc gtcctggaaa ccttggtagg
    19981 ccttggcgac cgtaagcgga ttcgcctgct cttcggcggc cagtgcccgg accgagggca
    20041 gcggatcgcc gtccttgtag cggccggcga ggatcgcgtt ggcgatggtc tcgcggaggc
    20101 ggacatagac cggcttttcg tgattggtgc gaagcgtcat gctgtcataa tacagcagcg
    20161 cgcaatttcg tcaaccattt cgctggatta gcggtcgggc gcccaccgag tgactaggtc
    20221 gtctagtctc gggcgctgac gctcttcgag ttcgacgctc gatcggccga tgaagatgaa
    20281 tcccgcaatt cgctgtccgg gctcgcagaa ttccgcggtt acgaggggcg aataggcgcg
    20341 ccagccagtc acccagccgg cggcaaagcc gagcgcgctc gccgccgtca gcaagttcat
    20401 tcccgcggcg ccgcaggaca gctcctgctc ccaaaccggg atcttgtgcc cgcggacagg
    20461 tgcggaaacg aggatgacga gcgccccgcc ataatgggcg aactcttcct ccttgttgtg
    20521 gtgtgcgtcg gccgcggccg gattttcctt ggaaagcgcg tcgtggagga ccgtcgcgag
    20581 cgctttacgc tggtcatgtt cgacgatcac gaagcgccac ggatggagct tgccgtgatc
    20641 gggggttcgg ctggcgatcg tgagaatttc ctccagctcc tgccgcgtgg ggccgggatc
    20701 ggccatcatc cgcggctttg ccgaacggcg ggttttcagg agcgatacta gggacgagcg
    20761 gtcattcagc acgccttttc tctagggagt ccgtgcgttc gtgcaacaat cggcttcaca
    20821 tgcgggtttg cgccgctagg gtgccgcacc tgcgacatcg gctggggaga agctttggtg
    20881 accggattga agccaatcgg gatgtggaac gagggcgact ggaccgtcgt cgtcaccctc
    20941 ggggtctttt cactgttcat aattgcaggc ttgctgattg ccgcacgccg cgaaccggaa
    21001 gcgatcggcc atcccaaggg cctctacatg ctcttcttcg cggagatgtg ggagcgcttc
    21061 tcctattacg ggatgcgcgc cctgctgatc ttctacctga cgcagcattg gcttttcagt
    21121 gacggcaggt cgaacctgat ctacggcgcc tataccagcc tcgtttatat cactccggtc
    21181 ctcggcggtt accttgccga ccgctatctc ggtcagcgcc gtgcggtgct gttcggcggc
    21241 attctgctca tgtgcggcca cttcctgatg gcgatcgaag gagacggcgg ccaaaacgac
    21301 ccgaccatca acgttttctg ggcggcactc gccttcatca tcgtcggatc cggattcctg
    21361 aaggccaaca tctctgtgat ggtcggccag ctttattcgc tcaccgacaa gcgccgcgat
    21421 ccggcctaca ccatcttcta catgggaatt aacgtcggtg ccgcggtcgg cactatcctt
    21481 gtgggctacc tcggagtcac ggtcggctgg ccgttcggct tcggactcgc aggattggga
    21541 atgctcgcgg gcctggtcgt cttcgtgctt ggccgctcgt ccctgcgggg cgccggcgag
    21601 gcaccgaagc cgctgaccaa gggcactgag tggaccttgt acgcagtcgg tgtggcagca
    21661 gtcgcgatcg tctggggcct gatccagtac caggacgtca tccagacgct gctcgtctac
    21721 tcgggcacga ttctcctcgc ctatgtggcg atggaggcga cgttcaggat tccttacggg
    21781 tcgctcggca atgccccgca gggacggttg tggatgatgg ggatcggcgt gctgctgatg
    21841 ctggtccagc cggttgcaac taccttcgat ctcgcgatcg cagggaacga tttgggtggc
    21901 ggcctgccga cttcggcctg ggtcatgatc gtcggcttcc tggtcatcct ggcgtcgatg
    21961 gcgctcgaga aattcagccg cgatgaccat tcgagggacc ggctttacgc gatcctgttc
    22021 cttatttcgc tgaacccgat cttctggggg ctcttcgagc aggcgggcgg aagcatcaac
    22081 ctgtacaccg accgattcgt tgcgatcggg gacgttcccg ctccgatctt ccagtcgatc
    22141 aacccgatct acatcatcct cctggcgcct ctgtttacga tcctctggac ttggcttgga
    22201 aaacgcgacc tcgagccatc ggcaccggcg aagttcgccc ttgcgctgtt ccaggtgggc
    22261 gctggcttcc tggtgttcgt ctggggcgcg accgcgttcc ccgtcgggcc ggaagcgaag
    22321 acggcggtcc tgttcgtgtt ccttctctac ctcctgcaca cgaccggcga actgtgcctg
    22381 tccccggtgg gtctgagcgc gatgaaccgg ctcgcaccca cgttcatggc gagcctgatc
    22441 atgggcgcct ggttctacat gaccgcggtc ggcaacttcg tcgccggcaa gatcggcgag
    22501 gcgaccggcg gagaatcggg cgagatgacc aaggagatga cgctgtcgat ctacagcacg
    22561 atcggctggt ggaccgtggg catcggcgtg gtcgtgctgg ccttgtcgcc gattgtgaag
    22621 ggatggatgc atctcgacac gctccgcgat gacgatcggc tcgccggccg tggtgaactg
    22681 gccgagcctc aggctcctgg ccttcacccc gagcgggaag aggatccgga gggagggccg
    22741 cggccggagc ggacttagtg cgggcattcg cggtcgcggc gacggccgca attgccgtcg
    22801 ccgctgccgg atgcgccgcc aacactccgc ccaagaaggc ggctcccgtc gtccgcgtcg
    22861 acgaagaccc gttcccgtcg acctatgtcg cctatcccgg cgttccgacg ctgatccgca
    22921 acgtcaccat cttcgacggc gaaggcgggc ggatcgacaa tggctggatc agctttgcgg
    22981 acggtcaggt cacaggcctc ggcgccggcc cgcaggacgc gccggcgggc accaacgtca
    23041 tcgacgggtc cggcaagttc gtcactcccg ggatcatcga cgtccacagc catctcggcg
    23101 actatccctc gccgggcgtc gagtccctgt ccgacggcaa tgaggcgaca tctcccgttc
    23161 gccccgaagt gtgggctgaa catagcgtct ggccgcagga tccgggcttc tccagggcgc
    23221 tgatcaacgg cggagtgacc actctccagg tccttcccgg ctccgccaac ctgttcggcg
    23281 gccgctcggt ggtgctcaag aacgtgcccg ctcggaccgt ccaggggatg aagttcccgg
    23341 gcgctcccta cggtctca
//
LOCUS       DATAKH010000072         7040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_1650,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000072 DATAKH010000000
VERSION     DATAKH010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7040
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1650"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..1742)
                     /locus_tag="VHN55_02700"
     CDS             complement(135..1742)
                     /locus_tag="VHN55_02700"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX2802881.1"
                     /translation="MRALMNAALAASTILAAQPLLAADIQSVPLIERAKLFGNPVKAN
                     GQISPDGKWLSWTAPRDGVMNVWVAPVDNPDAAKPLTDERKRPVRQYFWSPDSRQILF
                     IQDKGGDENFLLYGADVATGKQVALTPFPKTRARIFGVSSKHKDRILVGLNNRDPKWH
                     DAYSLNLKTGKLTLVQRNTGYASFLADNDLKLRTASKAREDGGAEYFRIVDGKIEAKP
                     FATVTLEDSMTTQPVGFTADGSTLYWTDSRGRNTAALVAQDVATGETRIVAEDSKADI
                     SETLVNPNTLQVEAYQAEYLTPDWTPLDPQIGAALEWLKYQLRASPVVQARTDADDKW
                     IVSADPVVEPASVYLFDRTNAKLTKLYTGRPELVGAPLVPMWPVEIKSRDGLTLPSYL
                     TLPVNADANRDGKAEQPVPMVLYVHGGPWGRDTYGYHPYAQWLANRGYAVLQVNFRAS
                     TGFGKDFVTAGNLQWGKTMHDDLIDSVDWAVANGVTTPDKVAIMGGSYGGYATLAGLA
                     MTPEKFACGVDIVGPSNLFTLLETIPP"
     gene            complement(1849..2025)
                     /locus_tag="VHN55_02705"
     CDS             complement(1849..2025)
                     /locus_tag="VHN55_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802882.1"
                     /translation="MIDEIFDRSYQSGRAGLNAGIDRLVARSVRATRDIFNVLERIQF
                     DAPWTKRRHHAGCA"
     gene            complement(2040..2237)
                     /locus_tag="VHN55_02710"
     CDS             complement(2040..2237)
                     /locus_tag="VHN55_02710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802883.1"
                     /translation="MTYRLDDSLFIENGAAAQSAQSAAARPAVRFLPWRKLDSERRLT
                     IIKEALNAPANAVIDGFPVAL"
     gene            2411..3328
                     /locus_tag="VHN55_02715"
     CDS             2411..3328
                     /locus_tag="VHN55_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004207345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2802884.1"
                     /translation="MTAIRAFEAAGRNENFTAAAAELGMTQAAVSYQVKALEERLGAA
                     LFVREKGRARLTPLGSRLLPPISQAFDAMEAVFASEREEDEALLTVTTTYTFANTWLA
                     WRLGTFQIAHPELAVRMAASDALADLRSGDADVAIRAGRADWEGLEQVQLFEVDFTPM
                     ASPECLAEAERKRGRRLEPADLLDLPLISPQDSWWKQWLGDWGVTSDGAPRHAGIRLD
                     VQAHEGNAAMGGQGFALLTPLLWASDLAHGRLVRPFPDKLSRRGWSYWLVYPPERRMV
                     PKIKRFREWLLAEFASSIRASAQPALDEQ"
     gene            3367..3966
                     /locus_tag="VHN55_02720"
     CDS             3367..3966
                     /locus_tag="VHN55_02720"
                     /inference="COORDINATES: protein motif:HMM:NF016154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YetF domain-containing protein"
                     /protein_id="HEX2802885.1"
                     /translation="MTPWWFEYLAVVAVATGAYLWLIFVLRLTGKRTLAKLNAFDFAI
                     TVAFGSALATIIIDEHVGILRGALVLAMLALLQFAVTKGSQWSDFVRRIVRARPTLLV
                     RDGMVYEKALKYERLTSNELAEIIRNNGFGRLADVGAVVLETDGSFSVLGGRFKDFDL
                     LYDAQIIGEASSQPIGERIRKAGGSGSGTSNRSKRAHTP"
     gene            3963..4424
                     /locus_tag="VHN55_02725"
     CDS             3963..4424
                     /locus_tag="VHN55_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017670716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HEX2802886.1"
                     /translation="MSDESKSDREHPEASRFELSAKRTDFAEDRTVLANERTFAGWFR
                     TGFASVAIGLGFQALFLRMEPPWVPKGIATLFLLLGIFLFVAAERRACQVLDRLSTHT
                     VNDFGNRRLRVMTIAASAGVLALIVAMWTLPLSAENTQPPETFEKAAEAVR"
     gene            complement(4430..4505)
                     /locus_tag="VHN55_02730"
     tRNA            complement(4430..4505)
                     /locus_tag="VHN55_02730"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4470..4472),aa:Ala,seq:ggc)
     gene            complement(4595..4912)
                     /locus_tag="VHN55_02735"
     CDS             complement(4595..4912)
                     /locus_tag="VHN55_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02300 family protein"
                     /protein_id="HEX2802887.1"
                     /translation="MVKPEWGTKRTCPKCSTRFYDLGKDDPAHCIECGTEWIPEPVLK
                     SKQPMPFDAGEADAKKKKDEDLEAEDLSVDEDEEPSADDEVDLTTDDDDLGVKKGDDD
                     EER"
     gene            5060..5698
                     /gene="cmk"
                     /locus_tag="VHN55_02740"
     CDS             5060..5698
                     /gene="cmk"
                     /locus_tag="VHN55_02740"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEX2802888.1"
                     /translation="MVIAVDGPAASGKGTIARALAAHFKLPHMDTGVLYRAVALNLWR
                     WGGDLNSEFEALRACDDLGSNLDDPELRSEPVSKIASSISAYPAVRETLLERQRAFAS
                     QPGGAVLDGRDIGTVIAPGADAKLFVTASADVRAQRRVRELLERGMPAHYEEVLRDLR
                     VRDARDSNREAAPLIAAADADVLDTSELTVDQAVAEAVRLVEARLGRSNIDR"
     gene            6781..>7040
                     /locus_tag="VHN55_02745"
     CDS             6781..>7040
                     /locus_tag="VHN55_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802889.1"
                     /translation="MRNGEWQPLRRQQRQRWPARKFRRQSTATSAAASAATATATAAA
                     TSAATAAAASTATAAAAAAASAATATAAATAATTTTAAAAATA"
BASE COUNT         1154 a         2301 c         2323 g         1262 t
ORIGIN      
        1 ccttgtccga tcagcagcgg ccgcttgatg gcgtcgacgt aggtgagcgg ggaggcggcc
       61 ttaagaagcg cccggccgtc ttccgtcgtc ggattgccca tgcgctggta gaattgctgc
      121 ttgatcgcct cccactaggg cgggatcgtt tcgagcaggg tgaagaggtt ggacgggccg
      181 acgatgtcga ctccgcaggc gaacttctcg ggagtcatgg ccagaccggc aagcgttgca
      241 tagccgccat agctgccgcc catgatcgcg accttgtccg gtgtcgtgac gccgttggcg
      301 acggcccagt cgacgctgtc gatcaggtcg tcgtgcatgg tcttgcccca ctgcaaattg
      361 cctgcggtga cgaagtcctt cccgaacccg gtcgaggcgc ggaagttgac ctggagaacc
      421 gcatagccgc ggttcgcgag ccattgcgca taagggtggt agccgtaggt gtcgcgcccc
      481 cacggaccgc cgtggacgta gagcaccatc ggcaccggct gttccgcctt gccgtccctg
      541 ttagcatcgg cgttgaccgg aagggttagg tagctgggca gagtcagtcc atcgcgagac
      601 ttgatttcga ccggccacat cgggaccaac ggggccccga cgagctcggg ccggccggta
      661 tacaatttgg tcagcttcgc attggtgcgg tcgaagaggt agaccgaggc cggctcgacg
      721 acgggatcgg cgcttacgat ccacttgtcg tcggcgtcgg ttcgcgcctg gaccactggg
      781 gacgcgcgaa gctggtactt cagccactct agagcggcgc cgatctgggg gtcgagagga
      841 gtccagtcgg gagtgagata ttcggcctga taggcctcca cctgaagtgt attcgggttg
      901 acgagagtct cgctgatgtc ggccttgctg tcttcggcga cgatcctggt ttcgccggta
      961 gcgacgtcct gggcgactag cgcggccgtg ttccttccgc ggctgtcggt ccagtaaagt
     1021 gtgctcccgt ccgcggtgaa tccgaccggc tgggtcgtca tcgaatcctc gagcgtcacg
     1081 gtcgcgaacg gcttcgcttc gatcttcccg tcgacgatgc ggaaatattc ggcgccgccg
     1141 tcctcgcgcg ccttggacgc ggtcctcagc ttgagatcgt tgtcagcgag gaagctcgca
     1201 tagccggtgt tgcgctggac cagcgtcagc ttcccggtct tgaggttcag gctgtaggcg
     1261 tcatgccact ttggatcgcg gttgttcagt ccgaccagga tcctgtcctt gtgcttgctc
     1321 gaaacgccga agatcctcgc cctggtcttc gggaagggcg tcagggccac ctgtttcccg
     1381 gtcgcgacat cggctccata cagaaggaag ttttcgtctc cgcccttgtc ctgaatgaac
     1441 aggatctggc gcgaatcggg agaccagaaa tactggcgga ccgggcgctt gcgctcgtcg
     1501 gtgagaggct tggcggcgtc gggattgtcg accggggcga cccagacgtt catcacgccg
     1561 tcgcgcggcg ccgtccagct cagccacttg ccgtcgggcg agatctggcc attggccttc
     1621 accgggtttc cgaacagctt tgcccgttcg ataagcggta cgctctggat gtcggccgcc
     1681 aaaagcggct gcgccgcaag gatcgtggac gccgcaagcg ccgcattcat taaagcacgc
     1741 attcgaaccc cctctaggtc aggtgtatta cgtgtctact acacacagcg aggggggatt
     1801 gcgaatcatt tgtttcggcg aggcggaaag cctgcccccg gccgtagctc aggcgcaacc
     1861 ggcgtggtga cggcgcttcg tccagggtgc gtcgaactga atgcgttcga gcacattgaa
     1921 gatgtcgcgc gtcgcgcgca cgctccgggc aaccaggcga tcgatgccgg cgttgagccc
     1981 ggcgcggccg gactgatagc tgcggtcgaa aatctcgtcg atcatcgtaa ccatctcctt
     2041 caaagtgcca cgggaaagcc gtcgatgacg gcgttggcgg gggcgttgag cgcctccttg
     2101 atgatcgtca ggcgacgctc ggaatcgagc ttgcgccatg ggaggaagcg cactgcgggc
     2161 ctcgcggcgg cggattgcgc cgactgcgcg gcggcgccgt tctcgatgaa cagcgaatcg
     2221 tccagtcgat aagtcatctt gccactgctc ctgctgtagc cgccggcgaa ggcgggggct
     2281 ttgggggagg gagaaatcct tcgccggcgg tgtgcaacct atgtattgac gagaagcttc
     2341 gcgcgccaat caaaggctcg acaggggcaa taaattgagc ttatgaagtc ggatgcgaaa
     2401 gctgcctccg ttgacagcaa tccgagcctt cgaggcggcc ggccgcaacg agaatttcac
     2461 ggccgcggcg gcggagctgg gaatgaccca ggcggcggta tcctaccaag tgaaggcgct
     2521 ggaggagcgg ctcggggcag ccctgttcgt tcgcgagaag ggccgggcgc ggctgacccc
     2581 gctcggaagc cggctactgc cgccgatcag ccaggctttc gacgcgatgg aagcggtgtt
     2641 cgcaagcgag cgcgaggaag acgaggcgct gctcaccgtc accaccacct atacgttcgc
     2701 gaacacctgg ctggcctggc ggctcggtac ctttcagatt gcccatcccg agctagccgt
     2761 gcggatggcg gccagcgacg ctttggcaga ccttcgctca ggcgacgccg atgtcgccat
     2821 ccgcgccggc cgcgccgact gggaggggct cgagcaggtg cagctgttcg aggtcgactt
     2881 cacgccgatg gcaagcccgg agtgccttgc cgaggccgag cgcaagcggg ggcggcggct
     2941 ggaaccggcg gacctgctcg acctgccgct gatcagtccg caggacagct ggtggaagca
     3001 atggttaggc gactgggggg tgacgtccga cggcgcgccg cgacatgcgg gaatccgtct
     3061 cgacgttcag gcgcacgagg gaaatgcggc gatgggcggg cagggcttcg cgcttctgac
     3121 tccgctgcta tgggccagcg acctcgccca cgggcggctg gtgagaccct ttcccgacaa
     3181 gctgtcccgg cgggggtggt cctattggct ggtctatcca cccgagcggc ggatggtgcc
     3241 gaagatcaag cgcttccgcg aatggcttct ggcggagttc gccagctcga tccgcgcgtc
     3301 cgcccaaccg gcactcgacg agcaatagcg cggaaagaac agcgcgtttc ccgcgttggg
     3361 ttggcgatga ccccctggtg gttcgaatat ctcgcggtcg tagcggtcgc gactggcgcc
     3421 tatctgtggt tgatcttcgt gcttcgcctg acaggcaagc gcactctggc caaactcaac
     3481 gccttcgact ttgcgatcac cgtggccttt ggctcggcac tcgccacgat catcatcgac
     3541 gaacatgtcg gcatcctgcg cggcgccttg gtattggcga tgctggctct gctccagttt
     3601 gcggtgacca agggatcgca atggtcggac ttcgttcgca gaatcgtccg cgcccgcccg
     3661 acactgcttg tccgcgatgg catggtctac gaaaaggcgc tgaaatacga gcggctgaca
     3721 agcaacgagc ttgctgaaat catccgcaac aacggcttcg gacgcctggc cgacgttggg
     3781 gcagtcgtgc tggagaccga cggcagcttc agcgttcttg gcggaaggtt caaggatttc
     3841 gatctgctgt acgacgccca gataatagga gaggccagtt cgcagccgat tggtgagcgc
     3901 attcggaagg ccggaggctc gggctcaggc acatcaaatc ggtcgaagag ggcgcacact
     3961 ccgtgagcga cgaatccaag agcgaccgcg aacatcctga agcgtcgagg ttcgagctat
     4021 cggcgaagcg gaccgatttc gcggaggacc gcaccgtgct cgccaacgag cgcaccttcg
     4081 cgggatggtt tcgcaccggc ttcgcgtcag tggcgatcgg cctgggcttc caggccctgt
     4141 tcctgcggat ggagccgccg tgggtgccga agggcatcgc gacgctgttc ctgctgcttg
     4201 ggatattcct gttcgttgcc gcagagcgcc gtgcctgcca ggtactcgat cggctaagca
     4261 cgcacaccgt gaatgatttc ggtaaccgcc ggctacgggt gatgacgatc gccgcaagcg
     4321 ccggtgtgct ggcgctgatc gtcgcgatgt ggaccttgcc gctgagcgcg gaaaatactc
     4381 agccgccgga gacgtttgag aaagcggcgg aggcggtgcg gtgagggggt ggtggagccg
     4441 agggggatcg aacccctgac cttcgcaatg ccattgcgac gctctcccag ctgagctacg
     4501 gccccgtgcc acgcgccttt aggcggaagt tcgcgcctcc gcaaagccca aaaatgccgt
     4561 cgccgggcct tcgtgggcgt gatttcggac gaggctagcg ctcctcgtcg tcatcgccct
     4621 tcttgacgcc gagatcgtca tcgtcggtcg taaggtcaac ttcgtcgtcc gcgcttggct
     4681 cctcgtcttc atcgacgctg agatcctcgg cttcgagatc ctcgtccttc ttcttcttgg
     4741 cgtccgcctc accggcgtcg aacggcatcg gctgtttcga cttgagcacg ggttctggaa
     4801 tccattccgt gccgcactca atgcaatggg cgggatcgtc cttgccgagg tcgtagaatc
     4861 gcgtcgagca tttggggcag gtgcgctttg tgccccattc cggtttgacc atcgggtcca
     4921 ggctccattc aggctgtttt cgcccgctgt gcagagctgc cagcggcgtg cggcgcgcgc
     4981 cttgccatag gcatttgacg ctgtcaaagc gcgccgcttg aacaacagtc cggcatccac
     5041 tcagcgcgcc cggcgcggga tcgtcattgc tgtcgacggg cctgctgcca gtggcaaagg
     5101 cacgatcgcc cgcgcgctag cggcgcactt caagcttccg cacatggaca ccggcgttct
     5161 ctatcgtgcg gtcgcgttga acttgtggcg gtggggcggc gacctaaaca gcgaattcga
     5221 ggccctgcgg gcgtgcgacg acctcgggtc caatctcgac gatcccgagc ttcggagcga
     5281 gcccgtttcg aagatcgcgt ccagcatttc cgcctatccc gccgtccgcg agacgttatt
     5341 ggagcggcag cgagcctttg cctcgcagcc cggcggcgca gtcctcgacg gccgtgatat
     5401 cggcacggtg atcgcgcccg gcgcggatgc gaagctgttc gtgacggcgt cggcggacgt
     5461 gcgggcccag cgccgcgtcc gagagcttct cgagcgcggc atgcctgccc attacgagga
     5521 ggtattgcgc gaccttcgcg tccgcgacgc gcgggattcg aatcgcgaag ccgcgccatt
     5581 gattgcggca gccgacgccg atgtcctcga tacgagcgaa ttgacggtgg atcaggcggt
     5641 cgccgaagct gttcgcctgg tcgaggcgcg gctcggccga tccaacatcg acaggtagcg
     5701 cgaagcggtc gttgagcacc gctgggaccg ccgggggccg agtcgcggtc ctcgccatgg
     5761 ttaacagccg tttacggtaa ccatttaatt ctgcttatac ttcagaggtt tgatcgaaaa
     5821 gccttgctag cgccccggat tccctgttgg cctcatcagt tgctccgaat tggagcgtgt
     5881 tcgcgtcgta ccgggatagg ggcgcgccag cttggcatat gtgggagtag attcgagggc
     5941 aacctctgcg cgtcgcggtg cgctgttgct gtgcgcctgc gccgtcattg ctctcgctag
     6001 cagccccgcc gttgcggccc cagccccgag cgccggagcg cccgcgtcca cgaaaattgt
     6061 caaatccgaa accggcaagc tacccaagcc accgagcccc gaaaccgggt taggtggcgg
     6121 cgaaccgccc gacgcatcgg gaccgcctgc ctccgctccg ccggcggctc cgccagccgc
     6181 cggggaaatc gtcgtcaacc agggcctgtt cgacgtcgct gcggagctgc ccgagacacc
     6241 cgggagcccg gacaacggca attcgcggtc ccccccggga ctgcagggtg gcggagcgat
     6301 gccgcccacg ccccaggcca gtggcagttc ggatcccggt cagctgctct tttccagttc
     6361 ggctccgccg cctgtcgaca cagttcgtgt cgagggcggt gccatcgtct tcgcggccgg
     6421 cggcggaccg cccgcagatg ccggcccacc cgctggggca ggccccccac ccgacgcagg
     6481 cccgccgccc gacgcaggac caccgcctga cgcaggcccg ccgcccgacc caggaccacc
     6541 gcctgacgca ggcccgccgc ctgacgccgg cccgccgaac cacgtagggc caccgtccga
     6601 cgcaggcccg ccgggagacg tgcctcgcgc cgacccttgt gcggcgggca atccgtgcaa
     6661 cggcaacaac ggcaacgacg gatcgcaagg caatgcgggc ggcgcaccgc cgcctccgcc
     6721 tccgcctccg ccgggcgacg gtggaaacgg cccgcccgac ggcgttcctc cgggtgaccc
     6781 gtgcgcaatg gggaatggca acccctgcgg cggcaacaac ggcaacgatg gccagcaagg
     6841 aaattccggc ggcaatccac cgccacctcc gccgccgcct ccgccgccac cgccaccgcc
     6901 accgccgccg ccacctccgc cgccaccgcc gccgccgcct ccaccgccac cgccgccgcc
     6961 gccgccgccg cctccgccgc caccgccacc gccgccgcca ccgccgccac caccaccacc
     7021 gccgccgccg ccgccaccgc
//
LOCUS       DATAKH010000073        13627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_16880,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000073 DATAKH010000000
VERSION     DATAKH010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 13627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13627
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16880"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1609
                     /locus_tag="VHN55_02750"
     CDS             <1..1609
                     /locus_tag="VHN55_02750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802890.1"
                     /translation="DFFENSREIHASVARSPNSIPLIELRGSVRSRIGDFAGAVEDLT
                     QRDDRELSQPVRIALLNALTAIEDFDRALQVATNLINDEYEDAELYVSASRAAERLGK
                     HEQAIAFAKQSFRLNRSDLSAALQALRLLTDHGAEELVAQWREELLENLGSSSSGAFA
                     LSQWAVEHSDEELFAAAISIVDDKGAVVDLVEEAFAAGLYGAVADSVATLVGIGRLAP
                     PLAKRRAALIENILDRSAELFESGKGNSAYRCATALAALADVPPGQLRTSRLAALAER
                     QIREWIRDVRSSVREAEAKGPAEVIQLAEKSGDLIKADASIAVAIARALDETGRESEA
                     LSLLASVEGDVAQDQLLRRWTGRIAMNAGEYRLALEMYGSLSGDESVPAKLRAEADRI
                     LPTLRTRALRQLRELIIAERFEEALILAGSITRRTGEVDRVQRELARMYKRLRSIAVE
                     IEKSEGDSDELERVLRLISQIRPDDQSMLRRLALELMRQFRFAEAAEVWSRVHLLAPD
                     NESAAKALDRCETLARRRSSAEIRATA"
     gene            1682..3631
                     /locus_tag="VHN55_02755"
     CDS             1682..3631
                     /locus_tag="VHN55_02755"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2802891.1"
                     /translation="MLNINSTSEFEVDKRLLDFGPTPVLAQTAAALEADLVELESIED
                     EDVFDQRWSRLDERFPGNVLLLSARVRRLIKRKAFEDAVAVVDSYPFADTDLLVKAEL
                     LFEAREIDRSRSLYDQLLKAEPERRDVRMSYGRHLFGNGFLTHAHDVLMPLRAAFPEG
                     AKKSDLIDRVHSLHALLTRLEGTPPPRGQDARIISMKNAILRFRNRDVRDCSDRGLGR
                     LCLITGGLGAGGAERQLTRLAVELERARADRGSVAGIALNHPVDVLVRSYDPDRQNDF
                     YLPDLDGAGVAVHQIDEFRPVAPKNLGIEDPDLLELLTFIPSSVNYGVKRLVDYFREA
                     RTDTVSIWQDGACLFAGLAALIAGVPHIQLAIRGLPPSMRKHMFRPEYQAFYQAMAQI
                     PGVSFISNNVCAAHAYADWLGIPHSRFAIVYNGVEPMQSVPSDECERRWAEFEQATAD
                     AEHTIGGVFRFNTDKQPLLWIRFAARYLKHHPRTRIVLVGGGRLLPNAEKLAQDLGIS
                     DRILFVGASNRVGYWMTRMDALILLSRYEGLPNVLIEAQYMGVRVVTTPAGGAAECLV
                     DGVTGGVLECAEDPDLDNAVALVRGLAEQSADRTIFAEGGVGRTFLDTHFSIPHMLSQ
                     YVSCTFDRLPRARMESLDPPSRRAA"
     gene            3649..4740
                     /locus_tag="VHN55_02760"
     CDS             3649..4740
                     /locus_tag="VHN55_02760"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX2802892.1"
                     /translation="MPVRGSGATRTCAGVAAATAAMLLVSGCTMPAAVGSLGDVRSSA
                     DQGQIVLVPLTAQTLPPAPPAQASFPAEFIQAGEFDYDRLGPGDRVAVRIWESGSPSV
                     FGATGVSDLGEMVVDESGRLFIPYAGAIRVSGLTLAEVRGEVLRRLRTVVADPQVDIR
                     PVQTRSRLVSVQGAASKAGTYPIERGRTQLGQLLAEVAPDQENPEMLAVTVRRDGRSG
                     TVRLSDIYKNPALDIPLRPGDSLILSPVTETVTVLGATGEQGSIDIPRRDFTLIEALG
                     AAKGLNPDAADPRAVFVLRVQADPAAPPIVYQADMRRPESIALANRFVVRPDDAILVS
                     NASFAQTRQLLLAVAQAVTAGRNASLVVP"
     gene            4737..5540
                     /locus_tag="VHN55_02765"
     CDS             4737..5540
                     /locus_tag="VHN55_02765"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2802893.1"
                     /translation="MTSAPGRAGRQAPAALGSGVFASADVIAALVRRDIQSRLTGNFL
                     GFGWTYVVPLVWIAGTYFAFYLFGRRVPVYTDTITFIISGLVPYIGFRYAVNAVSRTN
                     AAMQRLLIFPTVKLEHGVVSSALLEWVNVFVVFALVAALNALLFGNGEMDDPLRWVFG
                     TTLACALGASYAYFFVALTEIRPGFRQLGIVLLRPAFFISGIFFTSNELPERVLPLFL
                     WNPLLHAVEISRSGMLDHYEARAVSAAYPLAWIAGMIALAAAVRLTQRN"
     gene            5543..6244
                     /locus_tag="VHN55_02770"
     CDS             5543..6244
                     /locus_tag="VHN55_02770"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2802894.1"
                     /translation="MWGFVNCTRYYMSFGVPKVVLFEADLAVRTDEKVGVLIPPGTGK
                     STIIRLLAGADHPDSGAVVRDDGGWPLGYSGAFVGTMTGEENIHNIARLVGLDPLEMS
                     AFCLEFSELGDDYFQPLQLYSNGMRGRLAFAASFAIPAKTYLADEKVGIGDEKFRDKC
                     AAALADRLRTAGLILVASKPQLTRDICDRHGALIRGKFVMCASHEEASELFGASVRES
                     AADEFEDELASFDLA"
     gene            6283..7602
                     /locus_tag="VHN55_02775"
     CDS             6283..7602
                     /locus_tag="VHN55_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802895.1"
                     /translation="MDNEERIRRWRERQQAGGTSPAAAEADSEAARLGWATEDSPGAG
                     APADADVEVMRETILERRRLRVRSLVLRAALFVGIPLLAVLLYVALIATPLYRGEAVF
                     TVQTASQSAPSPSAGLFAVGSAGSTISDAFKAREYILSRPMMETLQQRHAFLDHFASP
                     EMDVLTRFNSPLGFNRDPYAYYLKRVRVQVDVQEGILHLYVYARTKEDAVRFGNAILS
                     AAESHVNALSKKMSEDQIRSLTADVREAEQDVQQSRRALAAVQARRGDVSPEQTATAV
                     YQLISQLQLQLAEAQRQRNSLLEQGLTNSPLLPRLKAQVEELQAQIADQKRRLSNPGG
                     GSLLRTLNEVEGANANKEIAQARYQSALNTLQEAYLKILEQRRYFVTIVAMSAGAFPK
                     VRDVLSIAWPILFLLAIVYALLFGLPRIRGETGPVRVTEVFTRWRRR"
     gene            7587..9539
                     /locus_tag="VHN55_02780"
     CDS             7587..9539
                     /locus_tag="VHN55_02780"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2802896.1"
                     /translation="MAPPISDTIADDLREELRAGRWKQAIALYERHLTADEKRSGECR
                     LAYAAALIRSGRVASGVKILAENPSLAAWGSEDLRRWVVKPLVDSGETGKALAVLDSL
                     VAGEDPAIRDLRLRASLLGRQKKWDEAIADAARAVARDPRDPGTNSQYLLLLIQGGRV
                     EEAGRHAAQIADFAADNGRLALAAMLALARSGQSDRAAVLAREAAECESMDCELAGAV
                     VRTLFETGRYDHAVEAGERLLDEGWDGAAIRGYLGEAHLARPSGNRFEKAIGHLRKGV
                     ALDPGSHRMNAALGEALLRQGSYDEAVRYLSAACELRPKNAQTRALHARALKQCRRFA
                     EAAVEFRRLLKLQPSSPRWQRYAAGALSQAGRRDEARKVFDIFVAERAANLPDDFEKG
                     LAALWDKLDEAAIPKARLDWAWSLRREELGNDREEWERRAKWGHLADHYLLDWLECRD
                     TQVHEPMRRLSDLAEAEQFLGGIDVSNGLIVAAAHVGPMYAGPLALELLGVPTRWVAS
                     TPSVARTSYAKSLISTSDQEDMQIAQAFMRSLRQKYAVVIGVDGAINLAAPRIMFEGQ
                     EITYSSFAARTAHRMGVPSIFAAPLWRNGKIGFMLRKLPDPVIVKNPDEYADLWRTSF
                     LGALREFLGGAPESLRLSGGIWRHVR"
     gene            9564..10697
                     /locus_tag="VHN55_02785"
     CDS             9564..10697
                     /locus_tag="VHN55_02785"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2802897.1"
                     /translation="MRIFVVTRSYPAPGDLYKYPFVHRRVVAYRAAGHEVRVFRPDAA
                     QPLSSHDFDGISCWTGGAEALASFAAEWKPDVVAVHGLSEAMWDALAPIASRFPVRAW
                     LHGSEIPAFMRHKSVVLPEPDRTAALRQVEGRCRFWRRLLGDLPARLKLVFVSKASVD
                     LAREDLASVLDEDQYEVVPNPVDTDLFAYREKAADDRYSVLLIRPFDSRTYANDLAVE
                     AIGKLVSRGPSGRLRFTIIGDGPLFDQTLAPLANVPNVSISRRFLRQEEIAREHARHG
                     IFLVPTRLDTQGLSRDEAMASGLVPVTNAIPAVREFVDDRCAALAPPDDSDSLADRIA
                     EMIDRPPLFLDRSRAAAQRIRRERSNAQIIPRELRLLAEAADA"
     gene            10690..11475
                     /locus_tag="VHN55_02790"
     CDS             10690..11475
                     /locus_tag="VHN55_02790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802898.1"
                     /translation="MREPEQHPKPPPPDFYMAAIGRSGSTMLANWLSNPPDRIVFNEP
                     FFLRPGNSRLLRIQLQALDLPVADAEWAQTDESPRERFGRLMGPRLCGRRWAAKEVLC
                     EEHVAMTKAFAPPRVLVSVRNIVDVALSFFEKHRLQKNLDRFGDDWVTEYCLRESAGL
                     LDYLAMLEASGTPCLVARYEDVTKSANELERIALFTGWPGGGEVAANLEAYGRGFEAS
                     RHGQSIAVSRHGRDRRAVPKECVRSAAMIGERCASYQRRFGYL"
     gene            11644..12465
                     /locus_tag="VHN55_02795"
     CDS             11644..12465
                     /locus_tag="VHN55_02795"
                     /inference="COORDINATES: protein motif:HMM:NF013548.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX2802899.1"
                     /translation="MKFHLLAAVAAAAVAAPAAAQTGPYVGADLGAIWITNDDAEYQG
                     FDGAFDTRVDLDHKVGIDADIVAGYDLGMFRVEGELGYKRASLDSDVLIPNDDFEDEF
                     GPYLGDNGGRARTVSAMINGLVDFDIGTNLGAFVGAGVGVARTNYKVNALNFQGTDSN
                     LAWQVLAGVRTAVTPNLDLGVKYRFFNTKYNVEEGATEELLGKWRSHSLLASLIYNFG
                     GVAAPPPPPPPPPPPPPPEPPATQTCPDGSVILATEMCPSPPPPPPPPPPAPERG"
     gene            12634..13134
                     /locus_tag="VHN55_02800"
     CDS             12634..13134
                     /locus_tag="VHN55_02800"
                     /inference="COORDINATES: protein motif:HMM:NF024890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEX2802900.1"
                     /translation="MTRYLTPAALAALALTAAPAAAQTQPAQPAQAQSITRATVVQET
                     QTTFSGIDTNKDGSITKAELEASQAKAIQAADAERQRQMQAEFTRLDTDKNGSLSLAE
                     FKAAASPVRARVTPDEALAGFDTNKDGKISLEEYRGPRLALFDKTDTNKDGTVTAAEV
                     DAARSR"
     regulatory      13201..13344
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            13338..>13627
                     /locus_tag="VHN55_02805"
     CDS             13338..>13627
                     /locus_tag="VHN55_02805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802901.1"
                     /translation="MAETADIPAWILLFIGLYSLTASIGEFRSPGTWAAMLADFERSA
                     GLRFITGFFVLVTGAAIYMASPWRPDDWVAVLVTVLGGMMALEGALILAMGDR"
BASE COUNT         2322 a         4540 c         4389 g         2376 t
ORIGIN      
        1 cgacttcttc gaaaattcga gggagattca tgcgtcggtg gcccgttcac ccaattcgat
       61 tccgctgatc gagcttcgcg gaagcgtgcg ctcgaggatc ggcgatttcg cgggcgcagt
      121 ggaggatctc acgcagcgcg acgacaggga gctgtcgcag ccggttcgaa ttgcgcttct
      181 aaacgcgctg accgcgatcg aagacttcga ccgagcgctc caggtcgcaa ccaacctgat
      241 caacgatgaa tatgaagacg ccgagctcta tgtttccgca agccgggcgg cggaacgcct
      301 cggcaaacat gagcaagcga tcgccttcgc gaagcaatcg ttccggttga accgcagcga
      361 cttgtccgcc gctctgcagg cccttcgcct gctcaccgac catggggccg aagagctggt
      421 ggcgcaatgg cgtgaagagc tgctcgaaaa tctcggcagt tcgtccagcg gcgccttcgc
      481 cctttctcaa tgggcagtcg aacattccga cgaagagctc ttcgccgcgg cgatttccat
      541 cgtcgacgac aagggagcgg tcgtcgatct ggtcgaggaa gctttcgcgg ccggtcttta
      601 cggcgcggtc gccgattcgg tcgctaccct ggtgggaatc ggccgacttg cgccgccgct
      661 cgcgaagcgc cgggcggcgc tcattgaaaa tatcctcgac cggagcgccg agctgttcga
      721 gagcgggaag ggcaatagcg cgtatcgttg cgcgactgcg ctcgcggcgc ttgccgatgt
      781 cccgcctgga cagcttcgaa catcgcgcct tgccgccctg gcggagcgcc agattcgcga
      841 gtggatccgc gacgtccgaa gctcggtccg cgaagccgag gcgaaggggc ccgcagaggt
      901 tattcagctc gccgaaaagt ccggcgattt gatcaaggcc gatgcctcga tcgcggtggc
      961 aattgcgcgg gcgctcgacg agaccggtcg cgaatcggag gcgctcagtc tcctcgcaag
     1021 cgtcgaaggc gacgttgcgc aggaccagct gttgcgccgc tggaccggac gaatcgcaat
     1081 gaacgccggc gaatatcgcc tggcgctgga aatgtacggc tcattgagcg gagacgagtc
     1141 ggttccggcg aaacttcgcg ccgaagcgga ccggattctt ccgacacttc ggactcgggc
     1201 gctcaggcag ttgcgcgagt tgatcatcgc ggagcggttc gaggaagcac tcattctggc
     1261 aggttcgatc acccgccgta ccggcgaagt cgatcgcgtc cagcgcgagc ttgcgcggat
     1321 gtacaagcgg cttcggtcga ttgcggttga aatcgaaaaa tccgaagggg acagcgacga
     1381 gttggaaaga gtcttgcggc tgatctccca gatccggccg gacgaccaga gcatgctccg
     1441 aaggctcgcc ctggaactga tgcgccagtt cagattcgcc gaggctgcag aggtatggag
     1501 ccgggtccac ctgctcgctc cggataacga atccgcggcc aaagctctcg accgctgcga
     1561 gaccttggcc cgccggcgct cgagcgcgga gattcgggca accgcttgac ccttcacttt
     1621 cgataggcca tcggcgcaat ccgcgataat gccgtcgatt gcgtaccggg gtgaatcatt
     1681 gatgttaaat attaattcga cgtcggagtt cgaggtcgac aagcgattgc tggacttcgg
     1741 cccgacgccg gtactggcgc aaaccgcggc cgcgcttgaa gcggacctgg tggaactcga
     1801 gtccatcgaa gacgaggatg tgttcgacca gaggtggagc aggctcgacg agcggttccc
     1861 aggcaacgtt ctgcttctat cggcgcgcgt caggcggttg atcaagcgaa aggccttcga
     1921 agacgcggtc gctgtcgtcg attcctatcc attcgcggac accgacctgc tcgtgaaggc
     1981 ggagctgctg ttcgaagcac gggagatcga ccgttcgcgc tcgctttacg accagctgct
     2041 caaggcggag ccggaacggc gcgatgtgcg aatgagctac ggccgtcacc ttttcggcaa
     2101 cggatttctc acacacgctc acgacgtgct catgcccctt cgcgccgcct ttcccgaggg
     2161 agccaaaaag agcgatctta tcgacagggt tcacagtctt cacgcactac tgacacgcct
     2221 ggaagggact cctccgccgc gcggccagga cgcccgaatt atctcgatga agaacgcgat
     2281 cctgcggttt cgcaatcgcg acgttcgcga ctgctcggat cgcggcctcg ggcgcctttg
     2341 cctcatcacc ggcggcctcg gggccggcgg ggcggagcgc cagctgactc gcctcgcggt
     2401 cgagctggag cgagcgcgcg ctgaccgcgg ttcggtcgca ggaatagcgc tcaaccaccc
     2461 cgtcgacgtc ctagtccgtt cgtatgaccc ggaccggcag aacgatttct acctgcccga
     2521 cctcgatggg gcgggcgtcg cggtccacca gatcgatgaa ttccggcccg tcgctcccaa
     2581 gaacctggga atcgaggatc cggacctgct cgaacttttg accttcattc cttcgagcgt
     2641 gaactacggc gtcaagcggc tggtcgacta tttccgcgag gcgcgtaccg acacggtttc
     2701 gatatggcag gacggcgcct gcctgtttgc ggggcttgcg gcgttgattg ccggggtccc
     2761 gcatatccag cttgcgatcc gcggtctccc gccgagcatg cgcaagcaca tgttccggcc
     2821 ggaataccag gccttctacc aggcgatggc acagatcccc ggcgtgtcgt tcatcagcaa
     2881 caacgtctgc gcggcccatg cctatgccga ctggctgggc attccccaca gccggtttgc
     2941 gatcgtgtat aatggagtcg agccgatgca gtcggtgcct tcggacgagt gcgagcggcg
     3001 ctgggccgag ttcgagcagg cgaccgccga tgcggagcac acgatcggcg gcgtgttccg
     3061 attcaacacc gacaagcagc ctctgctgtg gatccggttc gccgcgcgct acctgaagca
     3121 tcatccgcga actcggattg ttcttgtcgg cggcgggcgg cttctcccca atgccgagaa
     3181 gctcgctcag gatctgggga tcagcgaccg gatcctgttc gtcggcgctt cgaatcgagt
     3241 cggctactgg atgacgagaa tggacgcgct aatcctcctg tcgcgctacg agggcctccc
     3301 gaacgtgttg atcgaggcgc aatatatggg cgtcagggtg gtcacgacgc cggccggcgg
     3361 ggccgccgaa tgcctggtcg atggagtcac cggcggggtc ctcgaatgcg ccgaagaccc
     3421 cgatctcgac aacgccgtgg cgcttgtccg ggggctcgcg gaacaatcgg cggaccgcac
     3481 gatttttgcg gaaggcggcg tcggccgaac tttcctcgac acgcactttt ctataccgca
     3541 catgctttct caatatgtga gctgcacgtt cgatcggctc ccgcgagcgc gaatggagtc
     3601 gctcgacccg ccatcgcgaa gagcagccta gcccgaagga acccccaaat gcccgttcga
     3661 ggttcaggag cgacgcgcac ctgcgccgga gtcgccgccg cgacggccgc catgctgctc
     3721 gtatccggct gcactatgcc cgctgcggtc ggctcgctcg gcgacgttcg gtcgtccgcc
     3781 gaccaggggc aaatcgtgct ggtcccgctt accgcacaga cgcttccgcc ggcaccgccg
     3841 gcgcaggcga gctttcccgc cgagttcatc caggccggcg agttcgatta cgaccgcctc
     3901 gggcccggcg accgggttgc cgtgcgtatc tgggagagcg gatcgccgag cgtgttcggc
     3961 gcaacgggcg tgtccgacct tggagagatg gtcgtcgatg aatcggggcg gctgttcatc
     4021 ccatatgctg gcgcgatccg ggtttccggc ctgactctgg cggaggttcg cggcgaggtg
     4081 ttgcgcaggt tacgcaccgt cgtcgccgac ccgcaggtcg acatccggcc ggtccagacg
     4141 cgaagccgac tggtaagcgt gcagggcgcc gcatccaagg cgggaaccta tccgatcgag
     4201 cgcggccgga cccagctcgg ccaactcctt gccgaggtcg cgcccgacca ggagaacccg
     4261 gagatgctcg ccgtgacggt gcgccgcgac gggcgctcgg ggacggtccg gctaagcgac
     4321 atctacaaga acccggcgct cgacatcccg ctacgccccg gcgattcgct catcctgtcg
     4381 cccgtcaccg agaccgtgac cgtgctcggg gcgaccggcg aacaggggtc catcgacatc
     4441 ccgcggcgcg acttcaccct gatcgaggcg ctcggcgcag ccaaggggct caacccggac
     4501 gcggccgacc cgagggccgt gttcgtgctc agggtccagg ccgatccggc ggcgccgccg
     4561 atcgtctacc aagcggacat gcgccgtccg gaatcgatcg cgctcgcgaa ccggttcgtg
     4621 gtccggcccg acgacgcgat cctggtgtcg aacgcctcct tcgcccagac caggcagctg
     4681 ctgctcgccg tggcgcaggc cgtcaccgcc ggccgcaacg cgtcgctggt ggtgccatga
     4741 cctccgcccc cggcagagcc ggcaggcagg cgcccgccgc attggggtcg ggggtcttcg
     4801 ccagcgccga tgtcatcgcc gccctcgttc gccgcgacat ccagtcccgg ctgaccggca
     4861 acttcctcgg cttcggctgg acctatgtcg ttccgctggt gtggatcgcc ggcacctatt
     4921 tcgccttcta cctcttcggc cgaagggtgc cggtctacac cgacacgatc accttcatca
     4981 tctccgggct cgtcccctac atcgggttcc gctatgcggt gaatgcggtc agccgcacca
     5041 acgcggcgat gcagcgcctg ctcatcttcc cgaccgtcaa gctcgagcat ggtgtggtca
     5101 gctccgcgct tctcgagtgg gtcaacgtgt tcgtcgtctt cgccctcgtc gccgctctca
     5161 acgcgctgct gttcggcaac ggcgagatgg atgacccgct gcgctgggtc ttcggaacga
     5221 cgctcgcctg cgccctcggg gcgagctatg cctacttctt cgttgccctt accgaaatca
     5281 ggccgggttt ccggcagcta gggatcgtcc ttctgcggcc ggccttcttc atctccggaa
     5341 tcttcttcac ctccaacgag cttcccgaac gcgtcctccc gctgttcctg tggaacccgc
     5401 tcctgcacgc ggtggagatt tcgcggagcg gaatgctcga ccattatgaa gcgcgggccg
     5461 tgtcagccgc ttatccgctg gcctggattg cgggcatgat cgcgctcgca gccgcggtcc
     5521 ggcttacgca gcggaactga ccatgtgggg cttcgtcaac tgcactcgct attacatgtc
     5581 cttcggcgtg ccgaaggtgg tgctgttcga ggccgacctc gctgtccgga ctgacgagaa
     5641 agtgggggtg ctcatccctc ccggcaccgg caagtccacg atcatccgcc tgctggccgg
     5701 cgccgaccat cccgacagcg gcgcggtcgt gcgcgacgac ggcggatggc cgctcggcta
     5761 cagcggcgcc ttcgtcggca ccatgaccgg cgaggaaaac atccacaata tcgcccgcct
     5821 ggtcggcctc gacccgctcg agatgtcggc cttctgcctc gaattttcgg agctcggcga
     5881 cgattatttc cagccgctgc agctctatag caacggaatg cgcggccgcc tcgcgttcgc
     5941 ggccagcttc gcgattcccg cgaagaccta tctcgccgac gaaaaggtcg ggatcgggga
     6001 cgagaagttc cgcgacaaat gcgcggccgc gctggccgac cgcttgcgca ccgccggact
     6061 gatcctcgtc gcaagcaagc cgcagctgac cagggacatt tgcgaccgcc acggcgcgct
     6121 gatccgaggc aagttcgtca tgtgcgccag tcacgaggaa gcgagcgagc tgttcggagc
     6181 gagcgtccgc gaatccgcgg ccgacgagtt cgaggacgaa ttagcctcgt tcgacttggc
     6241 ctaactaatt gttgtatcaa cattttttac taggtttcga cgatggataa cgaagaacgc
     6301 atcagacgct ggagagagcg gcagcaggcc ggcggcactt cgcccgcggc cgccgaagcc
     6361 gattccgaag cggctaggct gggctgggca accgaggatt cgcccggagc cggcgctccg
     6421 gccgatgccg atgtcgaagt catgcgcgag accatcctcg agaggcggcg gctgcgggtt
     6481 cgaagcctcg tcttgcgggc tgccctgttc gtcgggattc cgcttctcgc ggtgcttctc
     6541 tacgtcgcgc tgatcgcgac tccgctctac cggggcgagg cggtgttcac cgtccagacc
     6601 gcgtcgcagt cggcgccgtc gccgtcggcg ggcctgttcg cggtggggag cgccggaagc
     6661 acgatttccg acgctttcaa ggcgcgcgaa tatatcctgt cgcggccaat gatggagact
     6721 ctccagcaac gtcacgcttt cctcgaccat ttcgcgtcgc cggaaatgga cgtgcttacc
     6781 cggttcaaca gcccgctcgg cttcaaccgc gatccctacg cttattatct gaagcgagtc
     6841 cgggtccagg tcgacgtcca ggaaggcatt ctccacctct acgtctatgc ccgcacaaag
     6901 gaggatgcgg tgcgcttcgg caatgcgatc ctcagcgccg ccgaaagcca cgtgaacgcg
     6961 ctttcgaaaa agatgagcga ggaccagatc cgctcgctga ccgccgacgt ccgggaggcg
     7021 gaacaggacg tccagcagag ccgccgggcg cttgccgcgg tccaggctcg ccgcggcgac
     7081 gttagcccgg agcagaccgc gaccgccgtc taccagctga tcagccagct tcaactccag
     7141 ctcgccgagg cgcaaaggca gcgcaactcg cttctcgagc aggggctgac gaacagtccg
     7201 ctgctgcccc gcctgaaggc gcaggtcgag gagcttcagg cgcagatcgc cgaccagaag
     7261 cggcgtcttt ccaaccccgg cggcggctcg ctcctgcgta ctctcaacga ggtcgaaggc
     7321 gccaacgcta acaaggaaat cgcccaggcc cgctaccagt cggcgctcaa cacgcttcag
     7381 gaagcctatc tgaagatcct cgagcagcgg cgttatttcg tcaccatcgt ggcgatgtcg
     7441 gcgggtgcct tccccaaggt gcgcgacgtg ctgtcgatcg cctggccgat cctgttcctg
     7501 ctggcgattg tctacgcgct tctgttcggc cttccgcgaa tccgcggcga gaccggcccg
     7561 gtacgagtga cggaggtctt cacgcgatgg cgccgccgat aagcgacacc attgccgacg
     7621 acctgcgcga ggagcttcgg gccggccgct ggaagcaggc gatcgccctc tacgaacgcc
     7681 acctgacggc cgatgaaaag cgctctggcg aatgcaggct ggcttatgcc gccgcattga
     7741 tccgctcggg cagggttgcc agcggggtca agatcctggc cgaaaatccg tctctcgccg
     7801 cttggggaag cgaggacctg cggcggtggg tggtcaagcc gctggtcgat tccggggaaa
     7861 ccggcaaggc gctggcggtg ctcgactcgc tcgtcgccgg cgaggatccg gcaatccgcg
     7921 atctccggct ccgggcaagc ctgcttggcc ggcagaagaa atgggacgag gcgatcgccg
     7981 acgccgcgcg tgccgtcgcc cgcgacccgc gagatccggg cacgaacagc cagtacctcc
     8041 tgctccttat ccagggcggg cgggtcgagg aggcggggcg gcacgcggcg caaatcgccg
     8101 acttcgccgc cgataacggc cggctcgcgc tcgccgcaat gctggcactg gcgagaagcg
     8161 gccaaagcga ccgggcggcg gtcctcgcaa gggaagccgc cgaatgcgaa tcgatggact
     8221 gcgagctcgc cggggcagtc gtgcgcaccc tgttcgaaac gggccgctac gatcatgcgg
     8281 tcgaagccgg cgagcggctc ctcgacgaag ggtgggatgg cgcggccatt cgcggctacc
     8341 tcggcgaagc gcacctcgcg cggccctccg gcaaccgttt cgaaaaggcg attggccact
     8401 tgcgcaaggg cgtcgcgctc gaccccggaa gccaccggat gaacgccgct cttggggagg
     8461 ccctccttcg gcagggatcc tatgacgagg cggtccgcta tctcagcgcc gcctgcgagc
     8521 tgcgcccgaa gaacgcgcag acccgggcgc tccatgctcg ggccctcaag caatgccggc
     8581 ggttcgccga ggccgccgtg gagttcaggc ggcttctcaa gctgcagccg tcgtcgccgc
     8641 gctggcagcg ctatgccgcc ggcgcgctga gccaggcggg ccggcgcgac gaggcgcgca
     8701 aggtgttcga cattttcgtt gcggaacggg ctgcgaatct gcccgacgat ttcgaaaagg
     8761 ggttggcggc gctgtgggac aagctcgacg aggctgcgat accgaaggcg cgtctcgact
     8821 gggcctggag cttgcgccgc gaagagctcg gcaacgaccg cgaggagtgg gagcgccgcg
     8881 cgaaatgggg gcatttggcc gaccattacc tcctcgactg gctggaatgc cgcgacacgc
     8941 aggtgcacga gcccatgcgg aggctctccg acctggccga ggcggaacaa ttccttggcg
     9001 gtatcgacgt cagcaatggg ctcatcgtcg ccgccgctca cgtcggcccg atgtatgccg
     9061 gccctctcgc tctcgagctg ctgggcgttc cgacgcgctg ggtggcctcg actccaagcg
     9121 ttgctcgaac ctcctatgcg aagtccctga tttccacgag cgaccaggag gacatgcaga
     9181 tcgctcaggc gttcatgcgt tcgctccggc agaaatatgc ggtcgtcatc ggggtcgacg
     9241 gagcgatcaa cctcgccgct ccgcggatca tgttcgaagg gcaggaaatc acctattcga
     9301 gcttcgccgc ccgaaccgcg cacaggatgg gcgttccgtc gatcttcgcg gcgccgctgt
     9361 ggcgcaacgg gaagatcggc ttcatgcttc gcaagctccc cgatccggtc atcgtcaaga
     9421 accccgacga atatgccgac ttgtggcgga cgagctttct cggcgccctt cgcgaattcc
     9481 tcggcggcgc tccggagagc cttcgcctta gcggcggcat ctggcgccat gttcgctgac
     9541 cgccgccgac cggagccgcc attttgcgca tattcgtagt cacaaggtcg tatcccgcgc
     9601 ccggtgacct gtacaaatat ccgttcgtcc atcgccgggt cgtcgcctat cgcgccgccg
     9661 gccacgaggt ccgggtgttc cggccggacg ctgcacaacc gctttccagc cacgatttcg
     9721 acggaatatc ctgctggacg ggcggggcag aggcgcttgc gtcattcgcc gccgaatgga
     9781 agcctgacgt ggtcgccgtc cacggcctca gcgaggcgat gtgggacgcg ctcgctccga
     9841 ttgcatcgcg gtttccggtg cgcgcctggc tccacggctc ggaaatcccc gctttcatgc
     9901 gccacaagtc cgtcgtcctt cccgagcccg atcggaccgc tgccctgcgg caagtcgaag
     9961 ggcgatgccg cttctggaga agattgctcg gcgacctgcc ggcgcggctc aagctcgtgt
    10021 tcgtgtccaa agcgtcggtc gacctcgccc gggaggacct ggcgtccgtg ctggatgaag
    10081 accagtatga ggtcgttccc aacccggtcg acaccgatct ctttgcctat cgggagaaag
    10141 ccgccgacga tcgctacagc gtcctcctga tccgcccgtt cgattcccga acctacgcca
    10201 acgacctcgc ggtcgaggca atcggcaagc tggtctcgcg cggaccttcc ggcaggctcc
    10261 gcttcaccat catcggcgac gggccgctgt tcgaccaaac gctggcgccg ctggcgaacg
    10321 tcccgaacgt ctcgatctcg aggcgcttcc tccggcagga ggagatcgcc cgcgagcacg
    10381 cccgccatgg cattttcctc gttccgacgc ggctcgacac ccagggattg tcccgcgacg
    10441 aggcgatggc gtcgggcctc gtccccgtca ccaacgcgat cccggcggta cgcgagttcg
    10501 tcgacgatcg ttgcgcggcg ctcgctccgc ccgacgacag cgattcgctc gctgatcgga
    10561 tcgcggagat gatcgaccgg ccgccgctgt tcctcgatcg ttcgcgcgct gccgctcagc
    10621 gaatccggcg cgagcgaagc aacgcgcaga tcatcccccg cgaattgcgc ctactcgcgg
    10681 aggcggcgga tgcgtgagcc ggaacagcat ccgaaaccgc ctccgcctga tttctacatg
    10741 gcggcgatcg gccgttcggg aagcacgatg ctggccaact ggctgtcgaa cccgccggac
    10801 cgcatcgtgt tcaacgagcc cttctttctt cggccaggaa actcgcggct gctcaggatc
    10861 cagctccagg ccctcgacct gccggtggcc gacgccgagt gggcgcaaac cgacgagagt
    10921 ccgcgggagc ggttcgggcg gctgatgggg ccgcggctct gcgggcggcg ctgggcggcg
    10981 aaggaggtgc tttgcgaaga acatgtggcg atgacgaagg ccttcgctcc gccccgcgtg
    11041 ctcgtcagcg tgcgcaatat cgtcgacgtc gcgctgagct ttttcgagaa gcatcgcctc
    11101 cagaaaaacc tggaccgttt cggtgatgat tgggtcaccg aatattgcct ccgcgaaagc
    11161 gcgggacttc tcgactatct cgccatgctg gaggcttccg gaacgccctg tctcgttgcc
    11221 cgctacgagg acgtgaccaa gtctgcgaat gagctcgagc ggatcgcgct attcaccggc
    11281 tggcccggcg ggggagaggt ggcggcgaac ctcgaagctt acggacgtgg cttcgaggcg
    11341 tcgcgccacg gtcagtccat tgccgtaagt cgccatgggc gcgacaggcg cgcggtgccg
    11401 aaagagtgcg tccgctccgc ggccatgatc ggggagcgtt gcgcgtccta tcagcggcgg
    11461 ttcggatatc tttgattaaa ggccggaaac ggcgagccgg ggccgatatg tgccaaattg
    11521 aactgagttg ttgccctatg agcacaatct gggtcaaaaa atcggtctcg cccccataga
    11581 ggttgaaact tccgcccaac gcctttgttg cagggacatc aaaagcagcg aaagggctta
    11641 agaatgaagt ttcacctgct agcggccgtt gccgcggccg ccgtcgcggc gcctgcagcc
    11701 gcccagacgg gtccgtatgt cggtgccgac ctcggcgcaa tctggatcac caacgacgat
    11761 gccgaatacc agggcttcga cggtgccttc gacactcggg tcgacctcga ccacaaggtc
    11821 gggatcgatg ccgacatcgt cgcgggctac gacctcggca tgttccgggt cgaaggcgag
    11881 ctcggctaca agcgcgccag cctcgactcc gacgtgttga ttccgaatga cgatttcgag
    11941 gacgagttcg ggccgtacct cggcgacaat ggcggtcgcg cacgcaccgt ttcggcgatg
    12001 atcaacggcc tggtcgactt cgacatcggc acaaacctcg gtgccttcgt cggcgccggc
    12061 gtcggcgttg cgcgcaccaa ctacaaggtc aacgcgctga acttccaggg taccgattcg
    12121 aacctcgcgt ggcaggtcct cgcgggagtg aggacggccg ttacgccgaa cctcgacctc
    12181 ggggtgaagt accgcttctt caacacgaaa tataatgtcg aggaaggcgc caccgaggaa
    12241 ctcctcggca agtggcgctc gcacagcctc ctcgccagcc tgatctacaa tttcggtggg
    12301 gttgcggctc cgccgccgcc gcctcctcct ccgccgccgc cgcctccgcc ggagccgccg
    12361 gcgacccaga cctgcccgga cgggtcggtg atcctggcga cggaaatgtg cccgtcgcct
    12421 ccgcctccgc ctccgccgcc gccgccggcg ccagaacgcg gctaagcgtc ggacgcaaag
    12481 gggacggccc gggagaaatc ccgggccgtt tctcttttcg gcccagtgcc tcaagcgagc
    12541 ggcgcggctc ccgaaccgtt ccttttcatc ttacagtcag ctagggcgtg cgagaccccg
    12601 tccaaacgat cgcaccctag gagacttcgc accttgaccc gctacctcac cccagccgcg
    12661 cttgcggccc tcgcccttac cgccgctcct gcggcggccc agacccagcc ggcgcagccc
    12721 gcccaggcgc agtccatcac ccgcgcaacg gtcgtccagg agacccagac gaccttttcc
    12781 gggatcgaca ccaacaagga cggttcgatc accaaggcgg agctggaagc gtcgcaggcc
    12841 aaggcgatcc aggcggcgga cgccgagcgc cagcggcaga tgcaggccga gttcacgcgc
    12901 ctcgacaccg acaagaacgg atcgctcagc ctcgccgagt tcaaggccgc cgcgtcgccg
    12961 gtccgcgccc gcgtaacccc cgacgaggcg ctcgccggct tcgacaccaa caaggacggc
    13021 aagatcagcc tcgaggaata tcgcggcccg cgccttgccc tgttcgacaa gaccgacacc
    13081 aacaaggacg gcaccgtcac cgccgccgaa gtggacgccg cgcgcagccg ctaggcccgc
    13141 gttccaggcg cgacaaaaga agcccggtgg ctggccagcc gccgggcttt tctttacgaa
    13201 cgaatcttcc cggggagcct tgagggaacg ccgacagtgc ggggcactgt tggatcccgc
    13261 aaagggctga gagtcggcat tttgccgaga cccgcagaac ctgatgccgt tagcgcggcc
    13321 gtagggagga gagacagatg gccgagaccg ccgatattcc cgcctggatc ctgttgttca
    13381 tcgggctcta ttcgctgacc gcctcgatcg gcgaattccg ctcgccgggc acctgggccg
    13441 cgatgctggc cgatttcgag cgctcggccg ggcttcgctt catcaccggc ttcttcgtgc
    13501 tggtgacggg agccgcaatc tacatggcca gcccgtggcg ccccgacgac tgggtcgcgg
    13561 tgctggtcac cgtgctcggc gggatgatgg cgctggaagg cgctctgatc ctggccatgg
    13621 gcgaccg
//
LOCUS       DATAKH010000074        13418 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20452,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000074 DATAKH010000000
VERSION     DATAKH010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 13418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13418
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20452"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..578)
                     /locus_tag="VHN55_02810"
     CDS             complement(<1..578)
                     /locus_tag="VHN55_02810"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127254.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX2802902.1"
                     /translation="MSVGAAGADQVAAGSQTAEGAIEDSIQNYTINFGPQHPAAHGVL
                     RLILELDGEIVERVDPHVGLLHRGTEKLIEYKTYQQALPYFDRLDYCSPMCMEHSFVL
                     AIEKLMGLEIPPRAQYIRTLMAELTRISNHMLNLGAHIMDVGAMTPNLWLFEVREDTL
                     QFYERASGARMHANYFRVGGVREDLPEKLFAD"
     gene            complement(602..1492)
                     /locus_tag="VHN55_02815"
     CDS             complement(602..1492)
                     /locus_tag="VHN55_02815"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEX2802903.1"
                     /translation="MAAKFATHVPRMASDEGVIEAARTAIGDAILNVREWCNEITLIV
                     RRDSIVEVLRALRDTPGLEYQQLMEIAGVDYPDQAERFEVDYHLLSLTKNRRIRVRLT
                     TDEATPVPSVVSLWPVAGWLEREVYDMYGVVFAGNPDLRRILTDYGFEGFPQRKDFPL
                     TGHVELRYSEAEKRVVYEPVDLPQDFRAFDFLMPWQGPEYRLPGDEKAMPEEAGAPSP
                     APPPTGGSKVNPPTSAKTPKTTDKPSDTGAGKPADKKATAQARKSGKAKAESQVDKDD
                     SNIPEPHPKSRNRRRPTGAA"
     gene            complement(1492..1896)
                     /locus_tag="VHN55_02820"
     CDS             complement(1492..1896)
                     /locus_tag="VHN55_02820"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2802904.1"
                     /translation="MSETSHQFRAHAPVLLVRDVVAAHAYFADKLGFRSPRMWGDPPT
                     FCIAQRDGLEVMLNQVGRDDEFRPNGDYDGRCDVYFWVNDADALCEEYRGTGADIVCE
                     PENQPYGMREFWVRDPDGHILIFGHDTSGTAN"
     gene            complement(1893..2384)
                     /locus_tag="VHN55_02825"
     CDS             complement(1893..2384)
                     /locus_tag="VHN55_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEX2802905.1"
                     /translation="MKLFEEMRTELDSKGFLVTSTEDLFTWARTGSLWWMTFGLACCA
                     VEMIHVNMPRYDLERFGVAPRASPRQSDVMIVAGTLCNKMAAPLRRVYDQMSEPRYVI
                     SMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIRREGT
                     IER"
     gene            complement(2465..2842)
                     /gene="ndhC"
                     /locus_tag="VHN55_02830"
     CDS             complement(2465..2842)
                     /gene="ndhC"
                     /locus_tag="VHN55_02830"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX2802906.1"
                     /translation="MASVAFGYLPILLFLLVAAGLSFAFVVLPMIVARFTGAHQPYPQ
                     KLSEYECGFPAFEDSRSQFDVRFYLIAILFIVFDLEAAFLFPWAVSLGVTQFVGWAAM
                     MIFLAELGFGLAYAWKKGALEWE"
     gene            complement(2913..3728)
                     /locus_tag="VHN55_02835"
     CDS             complement(2913..3728)
                     /locus_tag="VHN55_02835"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015456781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX2802907.1"
                     /translation="MVSHSGLITVMQRAVLKAAPRLRRDFGEVEQLQVSRKGPADFVS
                     MADKRAEQTIVDELRNARPDWGLLVEEAGEIEGNPDKPRWIVDPLDGTINFLHGIPHF
                     AISIAVEEKRPDGRGEITQAMVHQPLTDESFWAERGRGAWLQDRRLRVSARRDLTETV
                     IGTGIPHCGRGDSANWSKIYAAVGPEVSGVRRFGSAALDLAWVAAGRMDGFWEDDLDI
                     WDTAAGVLLVKEAGGFVTDYRGSDRSFERREYVAASGAIHSKLQKLVAGALRS"
     gene            complement(3737..4300)
                     /gene="efp"
                     /locus_tag="VHN55_02840"
     CDS             complement(3737..4300)
                     /gene="efp"
                     /locus_tag="VHN55_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEX2802908.1"
                     /translation="MKISGVDIRPGNIIEYEGGIWRAVKIQHTQPGKGGAYMQVEMKN
                     LMDGRKTNVRFRSAETVERVRLDTKDFQYLYHDGDMLVFMDKDTYEQVSLPQDLIGEA
                     AAFLQDGMDVKLDMYEERPISVEMPSQVEATIVEADAVVKGQTASSSYKPAILDNGVR
                     VMVPPHISSGTRIVVDPYTQEYVKRAD"
     gene            complement(4344..4952)
                     /locus_tag="VHN55_02845"
     CDS             complement(4344..4952)
                     /locus_tag="VHN55_02845"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2802909.1"
                     /translation="MSTAVISVILTSAFWIFTFNIFSAPHELQPAGKVTELETPGEPD
                     VAIAEGLVVGPAGLAIPVSGVKPGQLSDTFTQSRAGGRAHDAIDIMASEGTPVLSATP
                     GTVEKLFFSDGGGGNTIYVRSDDGRWMYYYAHLQRYAPGLAEGQRVRQGQIIGRVGHS
                     GNASAAGPHLHFAINRMEPGQKWYDGEPINPYPLLAGKQVSG"
     gene            5157..5873
                     /locus_tag="VHN55_02850"
     CDS             5157..5873
                     /locus_tag="VHN55_02850"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017672680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008198 - ferrous iron binding [Evidence
                     IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX2802910.1"
                     /translation="MATEPQQPVYYDPPNAPFATQGSELRAEIGRSVGEKLDSTPRMW
                     RLGASPERQVQLYVQEEFLSPAECRALFEKIDAGIYPSPLYEKEKYEGVRTSHSCNLD
                     VYDPVVAEIETRIADLLGIDRSWGEPLQGQRYEIGQEFKEHADFFYVDQPYWAEYEPH
                     GGQRTWTAMIYLNEPGKGGATGFRYLDLAVEPKAGRILVWNNMALDGSPNPWTAHAGR
                     PVEEGVKYIVTKWYRERNFS"
     gene            complement(5866..6534)
                     /gene="thiE"
                     /locus_tag="VHN55_02855"
     CDS             complement(5866..6534)
                     /gene="thiE"
                     /locus_tag="VHN55_02855"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX2802911.1"
                     /translation="MDEVSRDFADAFAPAERGDCRLYLISPQDVGGSFPDRLKAALEP
                     GLAAAFQLRVKAIEEHDLARLAEPLQAICAEAEVAFIVNDSISLAKRLGADGVHLGQS
                     DGDIREARLELGPSAQVGRTCHDSRHLAMEAGEAGADYVAFGAFYPTTTKPSDYRPDP
                     SILAWWSRLFEIPCVAIGGITADNAKPLVEAGADFLAVCQAVWSKDDPGAAVTAFAEI
                     LGVS"
     gene            complement(6537..7442)
                     /locus_tag="VHN55_02860"
     CDS             complement(6537..7442)
                     /locus_tag="VHN55_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019053630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose bisphosphate aldolase"
                     /protein_id="HEX2802912.1"
                     /translation="MMAQNQDMLAKVRDGNGFIAALDQSGGSTPKALKGFGYNGDEWS
                     NDDEMFDLVHRMRVRIITAQPFNGDKILGAILFEKTMDGQAEGRPVPEYLWSRGVVPF
                     LKIDKGLEEEKDGVQLMKPNPGLGALLERAVAKGVFGTKMRSVINEPDPLGIANVVRQ
                     QFEVAEQILRYGLVPIIEPEVNIKSADRTKSEMMLLHELQKGLDALPADQQVMLKLSI
                     PAEPGLFDPLVRHPRVLRVVALSGGFSRDKACRELAKNDGMVASFSRALLEGLRHDMS
                     DEEFNRTLGASIDQIYEASTAKVAA"
     gene            complement(7444..8655)
                     /locus_tag="VHN55_02865"
     CDS             complement(7444..8655)
                     /locus_tag="VHN55_02865"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010237749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX2802913.1"
                     /translation="MPAFKTLDDLPEDLTGKRVLVRVDLNVPMDGATVTDDTRLRAIL
                     PTVLDLSDRGAIVLLLSHFGRPKGQARPDMSTAQLVMPMSRLSGRSVRFIEDCQGPEA
                     QRGIATMLPGNIGILENTRFHPGETENDPELAKGMAELADYYVNDAFSAAHRAHASTE
                     GVAHLLPSFAGRAMEAELKALEKALGEPERPVAAIVGGAKISTKLAVLGHLVGKVDHL
                     IIGGGMANTFLAARDIDVGKSLAEHDLASEANAILAKAEEAGCTVHLPYDVVVAKELA
                     PNPPSLRTCNVHEIASDEMILDVAPASVEALSDVLKTCRTLVWNGPLGAFEVPPFEQA
                     TVALARTAAALTQEGSLVSVAGGGDTVAALNVAGVTEDFTFVSTAGGAFLEWMEGRTL
                     PGVAALQDKQG"
     gene            complement(8658..9665)
                     /gene="gap"
                     /locus_tag="VHN55_02870"
     CDS             complement(8658..9665)
                     /gene="gap"
                     /locus_tag="VHN55_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019370392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEX2802914.1"
                     /translation="MTKVAINGFGRIGRLVARAILERPDSGLELVAINDLADAKSNAW
                     LFKRDSVHGAFPGEVTTDGNNIIVNGKTIHVTAERDPAKLPHKANGVDIALECTGFFT
                     DRAGGEKHLEAGAKRVLISAPAKGADLTVVYGVNDDKLTAEHKIVSNASCTTNCLAPV
                     AKVLNDTIGIERGLMTTIHAYTNDQKILDQIHPDLRRARAAGMSMIPTTTGAARAVGE
                     VLPELKGKLDGSAVRVPVPDGSIIDLTFTPKRDTSVEEVNGALKAAAESGRLKGILVY
                     SDEPLVSIDIVHTPQSSTVDSLETAVLEGKLVRVVSWYDNEWGFSNRMVDTAAAMAKL
                     G"
     gene            complement(9662..11650)
                     /gene="tkt"
                     /locus_tag="VHN55_02875"
     CDS             complement(9662..11650)
                     /gene="tkt"
                     /locus_tag="VHN55_02875"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX2802915.1"
                     /translation="MQPTQRRLANAIRALAMDSVEAANSGHPGMPMGMADAATALFTR
                     YLKFDPADPNWPDRDRFVLSAGHGSMLIYALLYLTGYARPTLDDIRNFRQLGSPCAGH
                     PENFELPGVEVTTGPLGQGLAMAVGMAIAERHLNATYGDELVDHRTYVLAGDGDLMEG
                     VNHEAVGLAGHLKLGRLIVLWDDNRITIDGSTELSRNEDVVARYEASGWHTVECDGLD
                     SGKVSKALDAAIADSRPSLIRCKTIIGYGAPNKQGTAATHGAALGADEVAAARKELGW
                     DSPPFEIPEDVLTAWRETGKRGGADHREWVERLAASGKRDELFARLSGKSDEAWLKPY
                     LDSLVANPPKVATRKASEMALEAINSVVTSTIGGSADLTGSNNTKTKALEALTADNYG
                     GRYIYYGIREFGMAAAMNGMALHGGVIPYGGTFLVFTDYARPAIRLSALQKAKVIYVM
                     THDSIGLGEDGPTHQPIEHLQSLRAMPGLEVYRPADAIETAECWALALASDGPSVLAL
                     TRQNVPPIRTEASGENLCARGAYRVKSAGAERKVIFVATGSEVEIALGAAELLEAQGI
                     GADVVSMPCTERFDSQPDSYREDILPDVSNREILRVSVEAGTTFGWERYTGLHGLRIG
                     IDRFGVSSPAKDAYEFFGLTPDAVAARVTDFMKTRGIQ"
     gene            11775..11948
                     /locus_tag="VHN55_02880"
     CDS             11775..11948
                     /locus_tag="VHN55_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802916.1"
                     /translation="MDDGGLSAALDRAERALGRVERALSEHKPASGRDDELRAKVRDA
                     VAELDQLIREASR"
     gene            11948..12262
                     /locus_tag="VHN55_02885"
     CDS             11948..12262
                     /locus_tag="VHN55_02885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEX2802917.1"
                     /translation="MAEVDLIIAGRPYKVACRDGEEESLRAAGRLIDAKSREALAGLG
                     TLSEARQLLFAGLLLADQLLDERPGTATPAPDPELVNRAEQLAQRLESLASSLESHAP
                     AT"
     gene            12414..13022
                     /locus_tag="VHN55_02890"
     CDS             12414..13022
                     /locus_tag="VHN55_02890"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEX2802918.1"
                     /translation="MVVPSPSIPPLSKEALRAAALEARKAFVRSLDDAARQLLEQQLA
                     EHLTGMCASARVVGGYSPLGSEISPLLAMEEARSVGAVVAIPAFHNPAKPFRFLAGDP
                     RVPGPFGIMQPKPTAPPVDPDLVLVPLIAVDSNGTRLGRGKGHYDRVLGRLKRSGARL
                     VGVGWPMQRLANDIPADPWDVRLDAFASPDGLEWFERSGRAH"
     gene            13062..>13418
                     /locus_tag="VHN55_02895"
     CDS             13062..>13418
                     /locus_tag="VHN55_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802919.1"
                     /translation="MIVSTLFLARQRALTLWRDHSREGLALAGIAFAASLAAAGSAWS
                     SPSFDEIAAAKAEQTAPTPPPLLIRNVAPEEAAAVNHDIPLAAGPNPPAPAFSTAKLD
                     SATRARALDCLTSAVYY"
BASE COUNT         2251 a         4340 c         4369 g         2458 t
ORIGIN      
        1 atgtcggcga acagcttctc cggcaaatcc tcgcggactc cgccgacgcg gaaataattg
       61 gcgtgcatcc tggcacccga cgcgcgctcg tagaattgca gcgtgtcctc gcggacctcg
      121 aacagccaca ggttcggggt cattgcgccg acatccatga tgtgggcgcc gaggttgagc
      181 atatggttgg agatgcgggt gagttccgcc attagcgtcc ggatgtactg ggcgcggggc
      241 gggatctcga gccccatcag cttctcgatg gcgagcacga agctgtgctc catgcacatc
      301 ggcgagcagt aatcgaggcg gtcgaagtac ggcagcgcct gctggtaggt cttgtactcg
      361 atcagcttct cggtgccgcg gtggagcagc ccgacatgcg gatcgactcg ctcgacgatc
      421 tcgccgtcaa gctcgagaat gaggcgtagc actccatgag cggccggatg ctgcgggccg
      481 aagttgatcg tgtagttttg gatcgaatcc tcgatcgcgc cctcggcggt ttgggaaccg
      541 gcggcgacct ggtcggcgcc cgcggccccg acactcattt ccacggtgcg agtctcgccc
      601 atcaggcggc ccccgtcgga cggcggcggt tgcggctctt cgggtgcggc tcagggatgt
      661 tgctgtcgtc cttgtcgacc tggctctcgg ccttggcctt ccccgacttg cgagcctggg
      721 ccgtcgcctt cttgtcggca ggcttgccgg cccccgtgtc ggaaggtttg tcggtcgtct
      781 tcggggtctt cgctgaggtc ggcggattga ccttggaacc gccggtcggc ggaggcgccg
      841 gtgacggcgc tccggcttct tcaggcatcg ccttctcgtc gccgggcagg cggtattccg
      901 gcccctgcca cggcatcagg aaatcgaatg cccggaagtc ctgcggaagg tcgaccggtt
      961 cgtagacgac gcgcttctcg gcctcggaat agcgaagctc gacatggccg gtcagcggga
     1021 agtccttacg ctgcggaaag ccctcgaagc cgtaatcggt gaggatccgc ctgaggtcgg
     1081 gatttccggc gaagacgact ccgtacatgt cgtacacctc gcgctcgagc catccggcga
     1141 ccggccacag cgaaacgacg ctcggaaccg gggtggcctc gtcggtggtg aggcggaccc
     1201 ggattcgccg attcttcgtc agcgacagca ggtgataatc gacctcgaag cgctccgcct
     1261 ggtcgggata gtcgaccccg gcgatctcca tcagctgctg gtactcgagt cccggcgtgt
     1321 cgcgcagcgc cctaagaact tcgacgatgc tgtcgcggcg gacgatcagc gtgatctcgt
     1381 tgcaccattc gcggacgttg aggattgcgt cgccgatcgc ggtgcgtgcg gcctcgatga
     1441 ccccttcgtc ggaagccatt cgcgggacgt gagtggcgaa cttcgcggcc atcagttggc
     1501 ggtcccactc gtgtcgtggc cgaagataag gatgtggccg tcgggatcac gcacccagaa
     1561 ttcgcgcatt ccataaggct ggttctcggg ctcgcagacg atgtccgcgc cggtgccccg
     1621 atattcctcg caaagcgcgt cggcgtcatt cacccagaaa tagacgtcgc agcggccgtc
     1681 ataatcgccg ttggggcgga attcgtcgtc gcgcccgacc tggttgagca tcacttccaa
     1741 gccgtcgcgc tgggcaatgc agaaggtcgg cgggtcgccc cacatcctcg gcgaacggaa
     1801 accgagcttg tcggcgaaat aggcgtgcgc agcgacgaca tcgcggacga gcaggaccgg
     1861 cgcgtgggcc cggaactggt gcgaagtttc gctcaccgct cgatcgtccc ttcgcgacgg
     1921 attttccgct ggagctggag gattccgtag aggagcgcct cggcggtcgg cgggcagccg
     1981 ggcacgtaga tgtcgacggg gacgattcgg tcgcagccgc ggacgaccga atagctgtag
     2041 tgataatagc cgccgccgtt ggcgcagctt cccatcgaga tcacgtagcg cggctcgctc
     2101 atctggtcgt agacccggcg aagcggcgcg gccatcttgt tgcacagggt gccggcgacg
     2161 atcatcacgt ccgactggcg cgggcttgcg cgcggcgcga ccccgaacct ttcaaggtca
     2221 tagcgcggca tgttcacatg gatcatttcg accgcgcagc aagcgaggcc gaacgtcatc
     2281 caccacaagg agccggtgcg cgcccaggtg aacaggtcct cggtcgaggt gacgaggaag
     2341 cccttgctgt cgagctcggt ccgcatttcc tcgaacagct tcatgtcgac gtcgccgggg
     2401 gtcaggcctg cggcgcgcgc gatttcctct tcggtgggct gcgggtcctc gcccggacgg
     2461 agcatcactc ccattcgagc gcccctttct tccacgcata agcaaggccg aagccgagct
     2521 cggcgaggaa gatcatcatt gccgcccagc cgacgaactg ggttactcca agcgacaccg
     2581 cccaggggaa caggaacgcc gcctcgaggt cgaatacgat gaacaggatc gcgatcaggt
     2641 agaagcggac gtcgaactgg gagcggctgt cctcgaaggc ggggaagccg cattcgtact
     2701 cggaaagttt ctgcggatag ggctggtggg cgccggtgaa gcgcgccacg atcatcggca
     2761 gtacgacgaa cgcgaacgac aggccggcgg cgaccagcag gaaaagcaga atgggcaggt
     2821 agccgaaggc aacgcttgcc aaggggggac tccaggggct cgaaactcgg gcgcgcttta
     2881 ggacagcggg ttgcggctcg caaccgtctg ggtcagcttc tcagcgcccc cgcgacgagc
     2941 ttttgaagct tgctgtgaat ggcgcccgag gcggccacat attcgcggcg ctcgaacgaa
     3001 cggtcggagc cgcgataatc tgtgacgaag ccgcccgctt ccttgaccag gagaactccg
     3061 gcggccgtgt cccaaatgtc gaggtcgtct tcccagaatc cgtccattcg tcccgccgcg
     3121 acccaggcga ggtcgagcgc cgccgagccg aagcggcgaa cgccggagac ctcggggcca
     3181 acagcggcat agattttcga ccagttggcg gaatcgcccc ggccgcagtg cggtattccg
     3241 gtgccgatga cggtttcggt gaggtctcgc cgagccgaca cccgaaggcg gcggtcttgg
     3301 agccaggcgc ccctgcccct ctccgcccag aagctctcgt cggtcagcgg ctggtggacc
     3361 atcgcctggg tgatctctcc cctgccgtcg gggcgctttt cctcgacggc gatggagatt
     3421 gcgaagtggg gaatcccgtg gaggaagttg atggtgccat cgagagggtc gacgatccag
     3481 cgcggcttgt cgggatttcc ctcgatctcg cccgcttcct cgaccagcag tccccaatcc
     3541 gggcgggcgt tgcgaagctc gtcgacgatc gtctgctcgg cgcgcttgtc cgccatagag
     3601 acgaaatccg ccggcccctt gcggctgacc tgcagctgct cgacctcgcc gaagtcacgc
     3661 ctcagccgcg gcgccgcctt gaggacggcg cgctgcatga cggtgatgag gccggagtgg
     3721 gaaaccatgc tcgggcctaa tccgcccgct tcacatattc ctgcgtgtac gggtcaacga
     3781 ctatccgggt cccgctgctg atgtgcggcg gcaccatcac ccggacgcca ttgtcgagga
     3841 tcgcgggctt gtagctggac gatgccgtct ggcccttcac cactgcgtcg gcctcgacga
     3901 tcgtcgcctc gacctgactc ggcatctcga ccgagatcgg ccgctcctcg tacatgtcga
     3961 gcttcacgtc cattccgtcc tgcaggaacg ccgcggcctc tccgatcagg tcctggggaa
     4021 gcgaaacctg ctcgtatgtg tccttgtcca tgaacacgag catgtcgccg tcgtgataga
     4081 ggtactggaa gtccttggtg tcgaggcgaa cccgctccac tgtctcggcg ctgcggaagc
     4141 ggacgttggt cttgcggccg tccatcaggt tcttcatctc gacctgcatg taggcgccgc
     4201 ccttccccgg ctgcgtgtgc tggatcttca ccgcgcgcca gatgccgcct tcatattcga
     4261 tgatgttgcc gggacggatg tccacgccgc tgatcttcat gcgacaagcc tgttcatagt
     4321 ggattggaag gtcggcgcgg gctctagccg ctgacctgtt tcccggcaag gagcggatag
     4381 ggattgatcg gttcgccgtc gtaccacttc tgcccgggct ccatccgatt gattgcgaag
     4441 tgcaggtgcg gtccggcggc gctggcgttt ccgctgtgcc cgacgcggcc gattatttgc
     4501 ccctgccgaa cgcgctgccc ttccgcgagt cccggagcgt agcgctggag gtgggcgtaa
     4561 taatacatcc accggccgtc gtcggagcgg acgtagatgg tgtttccccc gccgccgtcg
     4621 ctgaagaaca gcttttcgac cgttcccggt gtcgccgaga ggacaggagt gccctcagaa
     4681 gccatgatgt cgatcgcgtc gtgagcgcgt ccgcccgcgc gcgattgagt gaaggtgtcc
     4741 gacagctgcc ccggcttgac gcccgagacc gggatggcga ggccggcagg cccaaccacc
     4801 aatccttcgg cgatcgcgac atcgggctcg ccgggagttt cgagctcggt gaccttgccg
     4861 gcgggttgca gctcgtgcgg ggcgctgaag atgttgaagg tgaatatcca gaacgcgctg
     4921 gtgaggatga cgctgattac cgcagtcgac acgacagcga gaacacgtcc tgccctctcc
     4981 gacctagttc gaccatcgct tggcggcact cgtagctcct cctcccgttc ggtccgttgc
     5041 cgctgtggaa cgatggaggg cacggtagtt tccgcgccgg cacgaatcag gccgggcgag
     5101 gccgggttca ccaatcgtcg attggcaaaa ccctcgaagt gcagcagagt cgggcaatgg
     5161 ccacggagcc ccagcagccg gtctattacg acccgcccaa cgcgccgttc gcgacccagg
     5221 gaagtgagct ccgggcagag atcggccgct cggtcggtga gaagctggat tcgacgccgc
     5281 ggatgtggcg gcttggcgcc tcaccggaac ggcaggtgca gctctacgtc caggaggagt
     5341 tcctcagccc tgccgagtgc cgcgcgcttt tcgaaaagat cgacgccgga atctatccct
     5401 cgccgctcta cgaaaaggag aaatacgaag gcgtccggac cagccacagc tgcaatctcg
     5461 acgtctacga tcccgtcgtg gctgagatcg aaacccggat cgccgacctg ctggggatcg
     5521 accgctcgtg gggcgagccg ctgcaaggcc agcgctatga gatcgggcag gagttcaagg
     5581 agcacgccga cttcttctac gtcgaccagc cctattgggc cgaatacgag ccgcacggcg
     5641 gccagcggac ctggacggcc atgatttacc tgaacgagcc cggcaagggc ggcgcgacgg
     5701 gctttcgcta cctcgacctt gctgtcgaac cgaaggccgg gcgaattctc gtctggaaca
     5761 acatggcgct cgacggcagc ccgaacccct ggaccgcgca cgccgggcgg ccggtcgagg
     5821 aaggcgtcaa atatatcgtc accaagtggt accgcgaacg gaacttcagc taacgccgag
     5881 gatctcagcg aacgcggtta cggctgcccc cggatcgtct ttgctccaaa cggcctggca
     5941 gacggcgaga aaatcggcgc cggcttcaac cagcggcttg gcgttgtcgg cggtgatccc
     6001 gccgatagcg acgcagggaa tctcgaatag gcgcgaccac caggccagga ttgacgggtc
     6061 cgggcggtag tcgctgggct ttgtcgtcgt tgggtagaag gcgccgaacg cgacatagtc
     6121 cgcgccggct tcaccggcct ccatcgccag gtgacggctg tcgtggcagg tgcggccgac
     6181 ctgcgctgac ggccccagct caagccgcgc ttcgcggatg tcgccgtcgc tctggccgag
     6241 gtggactccg tcggcgccca ggcgcttcgc gagtgaaatg ctgtcgttga cgatgaaggc
     6301 gacttcggcc tcggcgcaga tggcctgcag cggctctgca agcctggcga gatcatgctc
     6361 ctcaatggcc ttcacgcgca gctggaacgc agccgcaagc ccgggctcga gcgccgcctt
     6421 cagccggtct gggaaacttc ctccgacgtc ctgcgggctg atcaggtaga gcctgcaatc
     6481 gccgcgctct gcaggagcaa aggcatcggc gaaatcgcgg ctgacctcgt ccaaggtcag
     6541 gcggccacct tcgcggtcga cgcctcgtag atctggtcga tcgacgcgcc gagcgtgcgg
     6601 ttgaactcct cgtcgctcat gtcgtggcgg aggccttcga gcaaggcgcg cgagaagctc
     6661 gccaccatgc cgtcgttctt cgccagctcg cggcaggctt tgtcgcgcga gaagccgccg
     6721 gacaaagcga ctacacggag aacgcgcggg tgcctgacca gcggatcgaa taggcccggt
     6781 tccgcgggaa tcgaaagctt cagcattacc tgctggtccg cgggaagggc atcgagcccc
     6841 ttttgcaact cgtgcaaaag catcatttcc gatttggtgc ggtcggcgct cttgatgttc
     6901 acttcgggct cgatgatcgg gaccagccca taacgcagga tctgctcggc gacctcaaac
     6961 tgctggcgaa cgacgttggc aattccaagc gggtccggct cgttgatcac cgagcgcatc
     7021 ttggttccga acacgccctt tgcgacagcc cgctcgagga gcgcgcccag gccggggttc
     7081 ggcttcatca gctgcacccc gtccttttcc tcttcgaggc ccttgtcgat cttgaggaaa
     7141 ggtacgaccc cacggctcca tagatattcc ggcaccggcc ggccctcggc ctggccgtcc
     7201 atcgttttct cgaacaggat ggcgccaagg atcttgtctc cgttgaacgg ctgcgcggtg
     7261 atgatccgaa cccgcatccg atggacgagg tcgaacatct cgtcgtcgtt cgaccattcg
     7321 tcgccattgt agccgaagcc cttgagcgcc ttgggagtcg agcccccgct ctggtcgagc
     7381 gcggcgatga agccgttgcc gtccctgacc tttgccagca tgtcctgatt ctgagccatc
     7441 atcctaccct tgcttgtcct ggagggccgc aacgccggga agcgtacgcc cttccatcca
     7501 ttcgagaaat gccccgcccg cggtcgacac gaacgtgaag tcctccgtta ccccggcaac
     7561 gttgagcgcg gccacggtgt cgccgcctcc ggcgaccgaa acgaggctac cctcctgggt
     7621 caacgccgcc gcggtgcgag ccagagccac ggtcgcctgc tcgaaaggcg gcacctcgaa
     7681 agctccgagc ggcccattcc agaccagcgt ccggcatgtc ttaagaacgt ccgacagcgc
     7741 ctcgaccgaa gcaggcgcaa cgtcgagaat catctcgtcg cttgcgatct cgtggacgtt
     7801 gcaggtgcga agcgacggcg gattgggcgc caactccttc gccacgacga cgtcgtacgg
     7861 caagtggacc gtgcatcccg cttcttcggc cttggcgagg atcgcgttcg cctccgaagc
     7921 gaggtcgtgc tcggcgagcg acttgccgac gtcgatatcg cgagcagcga ggaaggtgtt
     7981 ggccattccc ccgccgatga tcaaatggtc gaccttgccg acgaggtgcc cgagcacggc
     8041 gagcttggtc gagatcttgg cgccgccgac gatcgcggcg acaggccgct ccggctcgcc
     8101 cagggccttc tccaacgctt ttagctccgc ctccatcgca cgccccgcga agctcggcag
     8161 cagatgcgcg acaccctccg tggaggcgtg ggcgcgatgc gcggccgaaa aagcgtcgtt
     8221 gacgtaatag tcggcaagct ctgccattcc cttcgcgagc tcgggatcgt tttcagtctc
     8281 gccgggatgg aaacgcgtat tttcgagaat cccgatattg cccggcagca tggtcgcgat
     8341 cccgcgctgt gcttccggcc cctggcagtc ctcgatgaac ctgacggagc gcccgctgag
     8401 gcgcgacatc ggcatgacaa gttgcgcggt cgacatgtcg ggccgggcct ggcccttcgg
     8461 acggccgaaa tgcgacagca gcaggacgat ggcgccgcga tcgctgaggt cgagcaccgt
     8521 cggcaaaatc gcgcgaagcc gggtgtcgtc cgtgaccgtc gcgccgtcca ttgggacgtt
     8581 caggtcgact cggacgagca cgcgcttgcc ggtcaaatcc tccggcaggt cgtcaagggt
     8641 cttgaacgcc ggcattgtca gccgagcttg gccattgccg cggcagtgtc gaccatccgg
     8701 ttcgagaagc cccattcatt gtcgtaccag ctgacgaccc gcacgagctt gccttcgaga
     8761 accgccgttt caaggctgtc gacggtcgag ctttgcggag tgtggacgat gtcgatcgag
     8821 accagcggct cgtccgaata gacgaggatg cccttcaagc ggccgctctc cgcggctgcc
     8881 ttgagcgcgc cgttcacttc ctcgacgctg gtgtcgcgct tcggtgtgaa ggtgaggtcg
     8941 atgatgcttc cgtccgggac cgggaccctg accgccgacc cgtcgagctt ccccttcagt
     9001 tccgggagca cttcgccgac ggcgcgggca gcgccggtcg tggtcgggat catcgacatc
     9061 cccgccgccc tggcgcggcg aaggtcggga tggatctggt cgaggatctt ctggtcgttg
     9121 gtgtaggcgt ggatcgtcgt catcagtccg cgctcgatgc cgatcgtatc gttgaggacc
     9181 ttggcgaccg gagcgaggca gttggtcgtg cacgacgcgt tcgagacgat cttgtgctca
     9241 gcggtcagct tgtcgtcatt gactccgtaa acgaccgtca ggtcggcgcc cttggctggt
     9301 gccgagatca gcacccgctt cgctccggct tcgagatgct tttcgccgcc cgctctgtcg
     9361 gtgaaaaatc cggtgcattc gagcgcgatg tcgacgccat tcgccttgtg cggaagcttg
     9421 gcgggatcgc gttcggcggt cacgtggatt gtcttgccgt tgacgatgat attgttgccg
     9481 tcggtcgtca cctcgccggg gaaggcgccg tggacgctgt cgcgcttgaa cagccaggcg
     9541 ttcgacttgg cgtcggcaag gtcgttgatc gcaaccagct ccagcccgct gtccgggcgc
     9601 tcgaggatgg cgcgggcgac caggcggccg atgcggccga agccgttgat tgcaactttc
     9661 gtcattggat tcctcttgtt ttcatgaagt cggtgacgcg ggcggcgacc gcatcgggag
     9721 tcaggccgaa gaattcgtaa gcgtccttcg caggcgagga gacgccgaag cggtcgatgc
     9781 cgatgcgcag gccgtggaga ccggtgtacc gctcccaccc gaaggtagtc cctgcctcga
     9841 ccgagactcg aaggatctca cggttcgaga catcggggag gatgtcctcg cgataactgt
     9901 caggctggga gtcgaagcgt tcggtgcacg gcatcgacac cacgtcggcg ccgatgccct
     9961 gcgcctcgag cagttccgct gcgcccagcg cgatttcgac ttccgatccg gtggcgacga
    10021 agattacttt tcgctccgcg ccggccgact tcactcgata ggcacctcgg gcacaaagat
    10081 tctcgcccga agcctccgtt cggattggag gcacgttctg cctggtgaga gcgaggacac
    10141 tggggccgtc gctcgcaagc gccagcgccc agcattcggc tgtctcgatc gcgtccgcgg
    10201 gacggtagac ttcaagaccc ggcatcgcac gcaggctctg cagatgctcg atcggctggt
    10261 gcgtcgggcc gtcctccccg aggccaatcg aatcgtgggt catcacgtaa atgacctttg
    10321 ccttttgaag agccgacagg cggatcgcgg gacgggcata atcggtgaag accaggaagg
    10381 tgccgccgta cgggatcact ccgccgtgaa gcgccatccc gttcatcgcc gcggccatcc
    10441 cgaactcgcg gatcccgtaa tagatgtagc ggccgccgta attgtcggcc gtaagcgcct
    10501 cgagcgcctt ggttttcgta ttgttcgagc cggtcaggtc agccgatccg ccgattgtgg
    10561 aggtgacgac ggagttgatc gcctcgagag ccatttccga cgccttgcgg gtcgcaacct
    10621 tcggtgggtt agccaccagc gagtcgaggt agggctttag ccacgcctca tcggacttgc
    10681 cggaaagtcg ggcgaacaat tcgtcgcgct tgccgcttgc ggccagccgc tcgacccact
    10741 cgcggtgatc ggctccgccg cgcttgcccg tctctcgcca tgcggtcagc acgtcttcgg
    10801 ggatttcgaa cggcggcgag tcccagccta gctccttgcg cgcggccgca acctcgtcgg
    10861 cgccgagcgc cgcgccgtgg gttgcggcgg tgccctgctt gttgggagcg ccgtagccga
    10921 tgatcgtctt gcaacggatg agcgagggcc gggaatcggc gatggccgcg tcgagcgcct
    10981 tggagacctt gccgctgtcg agaccatcac actcgactgt gtgccagccg gacgcctcgt
    11041 agcgtgcgac gacatcctcg ttgcgcgaca gctcggtcga accgtcgatc gtgatccggt
    11101 tgtcgtccca cagcacgatc agccgtccca gcttgaggtg ccccgctagc ccgaccgcct
    11161 cgtgattgac gccctccatc aagtcaccgt cgccggcgag gacataagtg cgatgatcga
    11221 ccaattcgtc gccataggtg gcgttgaggt ggcgctccgc gatcgccatt ccgaccgcca
    11281 tcgcaagccc ctgtccgagc gggccggtgg tgacctcgac gcccggaagc tcgaaattct
    11341 ccgggtgacc ggcgcagggc gaaccgagct ggcggaagtt cctgatatcg tcgagcgtgg
    11401 gacgggcgta gccggtgaga taaagcaacg cgtaaatcag catcgatccg tgaccggcag
    11461 acagcacgaa gcggtcgcgg tcgggccagt tcggatcggc cggatcgaat ttcaaatagc
    11521 gcgtgaacag cgcggtcgca gcgtccgcca ttcccatcgg cattccggga tggccgctgt
    11581 tggcggcctc caccgaatcc atcgctaggg cgcgaatggc gttggcaagt cggcgttggg
    11641 tcggctgcat ccgaactccg taaggggctt ggccgcgcgg cggactcgcc gggccgttcg
    11701 cggctccttt gctggctgag ccgttgggcg tcaatgcttg cggcgctgca gcactttgcg
    11761 taggccgtga agccatggac gacgggggcc tgtctgccgc actggatcgc gccgagcgag
    11821 cgctcggccg ggttgagcgt gccctttccg agcacaaacc ggcgagcgga cgcgacgacg
    11881 agcttcgtgc caaggtccgc gatgccgtcg ccgagctcga ccagctgatc cgcgaggcgt
    11941 cccgataatg gccgaagtcg acctcatcat tgccgggcgg ccgtacaagg tcgcctgcag
    12001 ggacggcgaa gaggaaagcc ttcgcgccgc cgggcgcctg atagacgcga agagccgcga
    12061 agctctcgcc ggtctcggaa ccctttcgga agcgcgccag ctgctattcg ccgggctcct
    12121 gcttgccgac caactgcttg acgaacggcc cgggaccgct acgcccgcgc ccgatccgga
    12181 gctggtgaac cgcgccgagc agctcgcgca gcgcctcgaa tcgcttgcct cctcccttga
    12241 gtcgcacgct ccggccacct aaatagccag cgacgggtac tgcccggtac gaagccacga
    12301 aaatccctga ggcgattaaa tatcctaggg gactgtccct gtccgggccc tggtccggtg
    12361 cacatggttc ccacctgacg tttgtggcgt cagaggattt ccggcaaacg gccatggtgg
    12421 tcccgtcacc ttccatacct ccgctgtcca aggaggcgct tcgagccgcg gcgctggagg
    12481 cgcgaaaggc gttcgtccgc tctctcgacg acgcggcgcg gcaactactc gagcaacaat
    12541 tggcggagca tctcaccggc atgtgtgcgt ccgctcgcgt cgtcggcgga tattcgccgc
    12601 tcggaagcga gatcagcccg ctgctggcga tggaggaagc acgctcggtc ggagccgtcg
    12661 tcgccattcc cgctttccac aatcccgcca agccgttccg cttcctcgcg ggcgatccgc
    12721 gggtgccggg accgttcgga atcatgcagc cgaagccgac ggcgccgccg gtcgaccccg
    12781 acctggtcct cgtgcccctc atcgcggtcg attcgaacgg caccaggctg gggcgaggca
    12841 agggccacta cgaccgcgtt ctcggcaggc tgaagcggtc gggagcaagg ctggtcggag
    12901 tgggctggcc gatgcagcgg ctcgccaacg atatccccgc ggatccctgg gatgtccgtc
    12961 tcgacgcctt cgcgagcccc gacgggctgg agtggttcga gcgttcaggt cgcgctcatt
    13021 gaacggcgcg tattattcca ctatatcact gactcctcca tatgatcgta tcgacactct
    13081 tcctcgcccg ccaaagggct ttgacgctgt ggcgtgacca tagtcgcgaa ggtctagcgc
    13141 tggccggaat cgcgttcgcc gcgtcgctcg cggccgcggg atcggcctgg tcgagcccaa
    13201 gcttcgatga gatcgccgcc gcaaaggccg agcagaccgc tccgacgccc ccgccgctcc
    13261 taatccgcaa cgtggctccc gaggaagccg ccgccgtcaa ccacgacatc ccgctcgcgg
    13321 ctggtccaaa cccgccagca ccggcttttt ccacagcgaa gctcgattcg gcgacccggg
    13381 cacgagcgct cgattgccta accagcgccg tttattac
//
LOCUS       DATAKH010000075         3766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_16899,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000075 DATAKH010000000
VERSION     DATAKH010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16899"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..73)
                     /gene="rpmH"
                     /locus_tag="VHN55_02900"
     CDS             complement(<1..73)
                     /gene="rpmH"
                     /locus_tag="VHN55_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEX2802920.1"
                     /translation="MKRTFQPSNLVRARRHGFRSRMAT"
     gene            complement(161..493)
                     /locus_tag="VHN55_02905"
     CDS             complement(161..493)
                     /locus_tag="VHN55_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802921.1"
                     /translation="MITRRQWRRFIDNAFVEWAIFGVGVLLLILSPIVGALPGPGGII
                     VAGIGLAMVLKTSMWARRRYVRFKRWQPKAGRMTDWALRRKSARRREAVRKAQRDQGE
                     TPQPRAGD"
     gene            682..2190
                     /locus_tag="VHN55_02910"
     CDS             682..2190
                     /locus_tag="VHN55_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020820660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEX2802922.1"
                     /translation="MAATVATVAYLGLEARAVEVQVQLSSGLPRFTIVGLADKAVAES
                     RERVRAALASIGLALPPKVITVNLSPADLPKEGSHYDLPIALCLLAAIGAADAEALSH
                     YVAVGELSLDGRIAASPGVLLAALHASGEDKGLICPAAQGSEAAWVGELDVIAAPDLL
                     ALLAHLKGNALLEAPPPAEAEPADWGPDLVQVKGQEVAKRALEIAAAGGHNLLMSGPP
                     GAGKSLLAACLPGILPPLEPSEALEVSMVASVAGELNGGKIRRRRPYRAPHHSASMPA
                     LVGGGLKVRPGEISLAHLGVLFLDELPEFQRQVLDSLRQPLETGAVSVARANTHVTFP
                     ARVQLVAAMNPCRCGHLGDPALACSRAPRCAADYQARVSGPLLDRIDLHVDVQAVSAA
                     DLTLPPPAEGSREVAARVADARKIQSRRFNGSGYRTNAEADGEVLDEVATPDEPGRKL
                     LADAAAAMRLSARGFHRVLRVARTIADLAGAEQVGRIHVAEALSYRRQAPRN"
     gene            complement(2288..2372)
                     /locus_tag="VHN55_02915"
     tRNA            complement(2288..2372)
                     /locus_tag="VHN55_02915"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2337..2339),aa:Leu,seq:caa)
     gene            2483..3658
                     /locus_tag="VHN55_02920"
     CDS             2483..3658
                     /locus_tag="VHN55_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX2802923.1"
                     /translation="MTDKVADAHALAEAFTAKRDRLLAALTLIGGIGLIIALPFALRA
                     GAEFFLPVTAALVVAVALVPLLEWFERRGIPSKLAAALCILLFLLLTVFAMGSIILPA
                     IDWVRLIPERIDKVQATLDPLLQLYKSFDEFTTRIISQMAMSPESGRTVRLETPNSLS
                     GLLATSAPHLLIQLFFALLVIFFFLAGWTKMRERTIVSRGSFEGALVTARVIQQVVDS
                     TSTYLGTITVINVSLGGLTALILWQLGMTSPVMWGGIVAVLNFIPYLGPIASALLLFL
                     GGLMVFPDAWGAMLPPMVFIGLHLVEANLITPMIVGERLEINPLAILISLSFWAWVWG
                     TTGALLAVPLLIIIKQVFSAAGTPDIAGFLFEHGTLTHVGEDEENEDGLVDSAEGVT"
BASE COUNT          583 a         1255 c         1234 g          694 t
ORIGIN      
        1 cggtcgccat gcggctccgg aacccgtgcc gccgcgcgcg gaccagattg ctcggttgaa
       61 aggtgcgctt catcgctcat gcctcaaaat tcaaaagaaa aagggccgcc gctggggcag
      121 cctccgttgc gcgcgccgat aggcgacggg tgcgtcgaag tcaatcgccg gcgcgcggtt
      181 ggggcgtctc gccttggtcg cgctgcgcct tgcggactgc ctcgcggcgg cgcgcgcttt
      241 tgcggcgtaa cgcccagtcg gtcattcgcc cggccttggg ctgccagcgt ttgaatctca
      301 cgtagcggcg acgcgcccac atgctggtct tcagcaccat cgccaggccg attccggcga
      361 cgatgattcc gcctggcccg gggagggcgc cgacgatcgg ggaaaggatg agcagcagca
      421 ctccgacgcc gaagattgcc cactcgacaa acgcattgtc gatgaaccgc cgccattgcc
      481 gacgagtgat cattcgcctc atgtggcccc cggcgagcgc acccgcaaga gcttgccccc
      541 gaggccaagg tcgcgttagc aggacaatgc cgagctaggg ggacctctgc cagtcgcgtc
      601 agtgtcgatc gtcattcccg cacatgcggg attcgtactc aatccgaatc cgaactcctg
      661 cttccctgga ggtggcgaat aatggccgca accgtggcca ccgtcgccta cctcgggctc
      721 gaggcgcgcg ccgtcgaagt ccaggtccag ctttcgtcgg gccttccgcg gttcacgatc
      781 gtcggccttg ccgacaaggc cgtggcggag agccgcgagc gggtccgcgc ggcgctggca
      841 tcgatcgggc tcgcgcttcc gcccaaggtg atcacggtga acctgtcgcc ggcagacctt
      901 cctaaggaag gctcgcacta cgaccttccg atcgccttgt gcctgctcgc ggcgatcggc
      961 gcggccgatg ccgaagctct gtcgcattat gtcgcggtcg gcgagctatc gctcgatggg
     1021 cggattgccg cctctccggg agtgcttctc gccgcccttc acgcctcggg cgaggacaag
     1081 ggtctgatct gcccagcagc gcagggaagc gaggccgcct gggtgggcga gctggacgtg
     1141 attgcagcgc ccgaccttct cgcgcttctc gctcacctga agggcaacgc gctgctggag
     1201 gcaccacccc ccgccgaagc ggagccggcg gattggggac ccgatctcgt ccaggtcaaa
     1261 ggccaggaag ttgccaagcg agcgctcgaa atcgcagcgg ccggcggcca caatttgctg
     1321 atgagcggcc cgccgggcgc cggaaagtcg ctgctcgccg cgtgccttcc cggaatcctg
     1381 ccgccgctgg agccatcgga agctctcgaa gtgtcgatgg tcgcatccgt tgcgggcgag
     1441 ctaaacggcg gcaagatcag gcgcaggcgg ccctatcggg ctccccacca ttcagcctcg
     1501 atgccggctc tggtcggcgg ggggctgaag gtgcgcccgg gcgagataag cctcgctcat
     1561 cttggcgtgc tgttcctcga cgaattgccc gagttccagc ggcaggttct cgattcgctt
     1621 cgccagccgc tcgagactgg agcagtcagc gtcgccaggg ccaataccca cgtcaccttt
     1681 cccgcgcggg tgcagctggt cgcggcgatg aacccctgcc gctgtggaca tctcggggac
     1741 cctgcgcttg cctgcagccg ggcgccgcgc tgcgccgccg attaccaggc gcgggtgtcg
     1801 ggcccgctgc tcgaccggat cgaccttcac gtcgacgttc aggcggtctc ggcggccgac
     1861 ctcactcttc cgccgccggc ggaaggcagc cgggaggtcg ccgctcgtgt cgcggacgcg
     1921 cgcaagatcc agtcgcgccg attcaacggt tccgggtatc gcaccaatgc cgaagccgac
     1981 ggcgaagtcc tcgacgaagt cgcgaccccg gacgagcccg ggcgcaagct gctcgccgac
     2041 gctgccgcgg caatgcgtct ctccgcgcgc ggcttccacc gggtccttcg ggtggcgcgg
     2101 acgatcgccg acctcgcggg ggccgagcag gtcgggcgaa tccacgttgc cgaagcgctc
     2161 agctaccgga ggcaggcgcc tcggaattga ctaccgtgag cgccgagcct ggtgcccgtc
     2221 agtcggctgg agcggctgag cgtgattttc gttctcgatg atcccccgga tcatctgcga
     2281 gcgaaaatgg tgcccctggt ccgactcgaa cggacactcc ggttaggaac tcgattttga
     2341 gtcgagcgcg tctaccattc cgccacaggg gccccgcagc cggccctagc taggcggcgg
     2401 gcagcctttt cgcaatccgc tggcgaggag cagccgcccc ggatatgctc gctcgatgga
     2461 cgccaagacc cgcaagagcg agatgacgga taaggttgcc gacgcgcacg cgctggcgga
     2521 ggcgttcacg gccaagcgcg accgcttgct cgcggcactg accctgatcg ggggcatcgg
     2581 cctgatcatt gcgcttccgt tcgcgcttcg cgctggcgcg gagttcttcc tgccggtcac
     2641 cgccgcactt gtcgtcgcag tggcgctcgt gcccctgctc gaatggttcg agcggcgcgg
     2701 cataccgtcg aagcttgcag cggccctgtg catcctgctc ttcctgctgc ttaccgtctt
     2761 cgcgatggga tcgataatcc tccccgcgat cgactgggta aggctgatcc cggagcggat
     2821 cgacaaggtc caggcgacgc tcgacccgct gctgcagctc tacaagagtt tcgacgagtt
     2881 cacgacgcga atcatctcgc agatggcaat gagcccggaa agcggccgta ccgtccggct
     2941 cgagaccccg aactcgcttt ccggccttct ggcgacgtcg gcgccgcact tgttgatcca
     3001 gctgtttttc gcgctcctgg tgatcttctt cttcctcgcc ggctggacga agatgcgtga
     3061 gcgcacgatc gtcagccgcg ggagtttcga aggcgcgctg gtgacggccc gggtaatcca
     3121 gcaggtcgtc gattcgacct cgacctacct tggcacgatc accgtcatca atgtcagcct
     3181 cggcggcctc accgcgctta tcctgtggca actggggatg acctctcccg taatgtgggg
     3241 cggcatcgtc gcggtgttga actttatccc ataccttggg ccgatcgcct cggcgctgtt
     3301 gctgttcctg ggtggcctga tggtctttcc cgacgcctgg ggagcgatgc ttccgccgat
     3361 ggtatttatc gggctgcacc tggtcgaggc caacctgata accccgatga tcgttggcga
     3421 acggctcgag atcaatcctc tcgcgatcct catatcgctg agtttctggg cgtgggtttg
     3481 ggggacgacc ggagcgcttc tggcggttcc tctgctgatc atcatcaagc aggttttctc
     3541 cgcggccggc acccccgaca ttgccggttt cctcttcgag cacggcacat tgacccacgt
     3601 cggggaggac gaggaaaatg aggacgggct tgttgacagt gcagagggcg tcacctaggt
     3661 cgcgcgcctc tcatcgaggc ccggcttcgg tgggacccag gaaaaatgcg cgggtgtagc
     3721 tcagttggtt agagcgccgg cctgtcacgc cggaggtcgc gggttc
//
LOCUS       DATAKH010000076         6864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_1690,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000076 DATAKH010000000
VERSION     DATAKH010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6864
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1690"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1221)
                     /locus_tag="VHN55_02925"
     CDS             complement(<1..1221)
                     /locus_tag="VHN55_02925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802924.1"
                     /translation="MSISTFDLDSTAAGTGATVSFTEQTEVFLFPNATLTTSGGSPGR
                     VDSITVTLSGATATESMSVAAATLTSLGMTGSYNSATGVLTLSKSNGTDADWVTALKA
                     VTYNNSSDTPSSSSRSITVVATDTSGPTTSTTNATINVTAVNDAPVNTVPGAQSAIED
                     SSKVIAGLAISDPDAGSATVTTTLSVLNGTITVATVGGGASVSGSGTGTVTLTGTVAQ
                     INATLAALNSVTYQGNANFNGADTLTMTTNDGGNSGSGGAKSDTDTVSISVSAVNDAP
                     VNTVPGAQSATEDTAKAITGLAVSDIDAGSGTITTTLSVLHGTITVATVGGGASVSGS
                     GTDTVTLTGTVAQINATLAALNAVTYVGDANFNGSDTLTMTTNDGGNSGSGGALSDTD
                     TVAISVSAVNDAPVN"
     gene            complement(1438..2328)
                     /locus_tag="VHN55_02930"
     CDS             complement(1438..2328)
                     /locus_tag="VHN55_02930"
                     /inference="COORDINATES: protein motif:HMM:NF013431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HEX2802925.1"
                     /translation="MADPLLTLVTGSLELELSPSIGGAISNFTWTGGGCRAPILRKSH
                     SPLENVLDAACFPLVPFSNRIRGGCFSFRGRQVRLAPNMAGDPSPLHGQGWTNAWRVE
                     AATDSAAVLAFDHEPGEWPWRYEARQEFRLDGDSLRLRLACRNRSDEPMPSGLGFHPY
                     FHCGPETRIQAGVEEVWTIDADVLPVERVKALGTYRIADDPVCGRGLDNGYGGWNGRA
                     LFTDPGWPFEIELSSPATRFFQIYSPREGRIFVAEPVTHANAALNEPEKNWHAVGLRL
                     LDSGEEMTLEARIGLKVKDA"
     gene            2450..2779
                     /locus_tag="VHN55_02935"
     CDS             2450..2779
                     /locus_tag="VHN55_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802926.1"
                     /translation="MKMGRRVKDFIEISDYTSLDSLINTLVAIRDNLPADAEPELKLR
                     GDDVFGRRLTISYSRDLTAEEAACDARYTGSVVNPDPGIEELREKLNGIPYNEDEASK
                     RRIRRVA"
     gene            complement(2810..3949)
                     /gene="dgoD"
                     /locus_tag="VHN55_02940"
     CDS             complement(2810..3949)
                     /gene="dgoD"
                     /locus_tag="VHN55_02940"
                     /EC_number="4.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008869 - galactonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactonate dehydratase"
                     /protein_id="HEX2802927.1"
                     /translation="MKIATIDTFYVAPRWLFVRVESDEGAVGWGEASLEGHAEAVEGA
                     FAGLRDRFIGEDPFRIEHIWQVGYPGGFYRGGPVLMSALAGLEQALWDLKGRVLGLPV
                     WEMLGGRVRDKIRAYAWIGGDRPHEIASAAQGRRDQGFSAVKMNATAELDWIGTPKLF
                     DEVIERVKAAQEVGMDVGLDFHGRVHRPMAKQLAKALEPLGLLFIEEPLLSENHEGLR
                     QIAELTSTPIALGERLYSRWDFKPFFESGAVDIIQPDLSHAGGILEVRKIAAMAEAYD
                     IAVAPHCPLGPLALAACLQLAACAPNVAIQEMSLGIHYNVGADLFTYCRQKQQLTPTD
                     GYLTIPTGPGLGVDIDEDVVRESDKDRHRWRNPVWHLADGSFAEW"
     gene            complement(3946..5241)
                     /locus_tag="VHN55_02945"
     CDS             complement(3946..5241)
                     /locus_tag="VHN55_02945"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEX2802928.1"
                     /translation="MFATGIENSIPTINGGKTRIDEMEVAGFYKHWREDFDAVQELGI
                     HYLRYGPPLYRTFLGPDRYDWEFTDETFAELRRRDITPIVDLCHFGVPDWIGNFQNPD
                     FPRLFADYAAAFAERFPWVQLYTPVNEMFICAMFSAKYGWWNEQLRSDKAFVTALKHI
                     VKANVLAMLAILKRRADAIFIQSESSEYFHADSPKAIHIAEQLNSRRFLSLDLNYGRR
                     VDSDMFEYLTDNGMTRQEYHFFLHNRLKQHCILGNDYYRTNEHRVYEDGRTTASGEVF
                     GYTEITRQYYNRYRLPVMHTETNLVEGPVGDEAVQWLWKEWANVLRLRNVGIPTVGFT
                     WYSLTDQVDWDTALREQNGHVNPLGLYDLNRNIRNVGRAYKKLIRDWREVLPASSLCL
                     TVPIVPPSHYDTQSSREQEHEAQERLSKEEIDFESGDGR"
     gene            5400..6284
                     /locus_tag="VHN55_02950"
     CDS             5400..6284
                     /locus_tag="VHN55_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxygalactonokinase"
                     /protein_id="HEX2802929.1"
                     /translation="MRWAEGFIAVDWGTTNRRAYLLDESGSCTREFEDGRGILSVERE
                     GFGAAVAEIRERLGDRPMLLAGMVGSNRGWIEAPYVPCPAGLDDLVKNLAWPEVDRTA
                     IVPGVVYSDGRSDVMRGEEIQIVGAVASGEIPSDCLVCHPGTHNKWVRVSGGRIESFR
                     TVMTGELFNLLRDRSILSELITVPAAINPAFCDGVRRGFSGQGITAELFEARARFLLG
                     HLDKAEGASFVSGLLIGEDVRIGLGDTRNRRIIVMGRPELTSLYSAALGECGAQGEEV
                     DGEGAFIAGACRIVERIE"
     gene            6281..>6864
                     /locus_tag="VHN55_02955"
     CDS             6281..>6864
                     /locus_tag="VHN55_02955"
                     /EC_number="4.1.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-6-phosphogalactonate aldolase"
                     /protein_id="HEX2802930.1"
                     /translation="MSARELFDRYFGECPLVGIIRGVTQQEAAAIGRAVFDGGIRIIE
                     VPLNSPEPFASIRNIADALGDAALVGAGTVLDPADVARVRDAGGQLIVSPNMNPQVIE
                     ATVAAGMVSSPGIFTPSEAFAALDLGAHALKLFPAEAASPSVVKALRAVLPKDVPLVI
                     VGGVTPESVRGWLDAGADGFGLGGGLYKPGQSSE"
BASE COUNT         1217 a         2130 c         2219 g         1298 t
ORIGIN      
        1 gtttacaggc gcgtcgttga ccgcggagac gctgatcgcg actgtgtcgg tgtccgacag
       61 ggctccgccg ctgccgctgt tgccgccgtc gttcgtcgtc atcgtcagcg tgtcgctgcc
      121 attgaaattc gcatcgccga cgtaagtcac ggcgttgagg gcggctaagg tcgcgttgat
      181 ctgcgccacg gttcccgtca gcgtgactgt gtcggtcccg cttccgctta ccgaagcgcc
      241 gccgccgacg gtggcgacgg ttatcgttcc gtgaagcacc gacaaggtcg tcgtgatggt
      301 ccccgatccg gcgtcaatgt cgctgacggc taggccggtg attgccttgg cggtgtcctc
      361 ggtcgcgctc tgcgctccgg ggacggtgtt cacaggcgcg tcgttgaccg ccgaaacgct
      421 tatcgagacc gtgtctgtat cggacttcgc tccgccgctt ccgctgttcc cgccgtcgtt
      481 cgtcgtcatc gtcagcgtgt cggcgccgtt gaagttggca ttgccctggt aggtgacgct
      541 gttgagagca gcgagggtgg cgttaatttg ggcgacggtc ccggtgagcg tcacggtgcc
      601 ggtcccactg ccgctgacgg acgcgccgcc gcctacagtc gcgaccgtta tcgttccgtt
      661 cagcaccgac aaggtggtgg tgacggttgc ggaccccgca tcgggatcgg agatggccag
      721 cccggcgatg accttcgagc tatcttcgat cgccgattgg gcaccaggaa cggtgtttac
      781 gggagcgtcg ttgaccgcgg tgacattgat cgtcgcgttc gtggtcgacg tcgtcgggcc
      841 acttgtgtcc gtggcaacga cagtgatgga ccgcgaactc gaagatggag tgtcgctgct
      901 gttgttatag gtgacggcct tcaacgcggt gacccaatcg gcgtcggtcc cattggactt
      961 cgacagggtc agcacgccag tcgccgaatt gtacgacccg gtcatcccga ggctggtgag
     1021 ggtcgccgcg gcgaccgaca tgctttcggt tgcggtggcg cccgaaaggg taacagtgat
     1081 gctgtcgacc cggcccggac tcccgccgga agtcgtcaac gtcgcattcg gaaacaggaa
     1141 gacctcggtc tgctcggtga acgaaacggt ggcgccggta ccggcggccg tgctgtcgag
     1201 atcgaaagtg ctgatggaca ttgtaggctc cctcaaaatc gagggtgcac gaatccgcga
     1261 ccacgcagcc ggttggccgt caaacctccc acctgtgcgg tgcccctccc gggggacacg
     1321 agcaccccgg ccgtcatccg cagtgtggac aaacggccta agtgggtcgc tatttacttg
     1381 agtcgtttaa tttaaataga gcccgaaagg taattgtgca aagttaactg gcaaaagtta
     1441 ggcgtctttt actttgaggc cgatgcgggc ctccaaagtc atctcctcac cggaatcgag
     1501 taggcgcaac ccgacagcgt gccaattttt ttcgggctcg ttgagcgcgg cattggcgtg
     1561 ggtgaccggc tcggcgacga agatgcggcc ctcccggggc gaatagatct ggaagaagcg
     1621 agttgcgggc gagctcagtt caatctcgaa gggccagccc ggatcggtga acagcgctct
     1681 cccgttccag ccgccatagc cgttgtcgag cccgcgcccg cacaccggat cgtcggcaat
     1741 ccgatatgtc ccgagcgcct taacccgctc gacgggaagc acgtccgcat cgatggtcca
     1801 gacctcctcg actcccgctt gaatgcgcgt ctccggcccg cagtggaaat agggatggaa
     1861 gccaagcccg ctcggcatcg gctcgtccga ccgattccgg cacgccagcc gcaagcggag
     1921 tgaatcgccg tcgagccgga actcctgccg agcctcgtac ctccatggcc attcgcccgg
     1981 ctcatggtcg aaggcgagaa ccgcggccga atccgttgcc gcttcgaccc gccaggcgtt
     2041 cgtccagccc tggccgtgaa gcgggctcgg atcgccggcc atgttcgggg cgagacggac
     2101 ctgccggcca cgaaaggaaa agcacccgcc gcgaatccgg ttgctgaacg gaaccagcgg
     2161 aaagcaggcg gcgtcgagca cattttcgag cggactgtgg ctctttcgca atatcggtgc
     2221 gcggcagcct ccgccggtcc aggtgaaatt cgaaattgcg ccaccgattg aaggactaag
     2281 ctccagctcg agcgaaccgg tgacgagcgt cagcagaggg tcggccatgc agccctaaac
     2341 ctcagccgac caacttgttc acgagggcta aacttccttg gggataaatc tgcattagga
     2401 gttgcgccgg atttttgcgc aacaataatt gggccccgcg ggacggggag tgaagatggg
     2461 tcgacgcgta aaggacttta tcgagatcag cgactacacg tcgctcgaca gcctgatcaa
     2521 cacgttggtc gcgatccgcg acaacctgcc tgccgacgcg gaacccgagt tgaagctgcg
     2581 cggagacgac gtgttcgggc gccgcctgac gatctcctac agccgcgacc tgaccgccga
     2641 agaggccgcg tgcgatgcgc gctacaccgg ctcggtcgtc aatccggacc ccgggatcga
     2701 ggagcttcgc gagaagctca atggcattcc ctacaatgaa gacgaggctt ccaagcggcg
     2761 cattcgccgg gtcgcctaat cgctgttcgc ggctgccctc atcagcaact caccattccg
     2821 caaagctgcc atctgcaaga tgccacacag ggttgcgcca gcgatggcgg tccttgtcgg
     2881 attcccgaac cacgtcctcg tcgatgtcga ctcccagccc gggccccgtc gggatcgtca
     2941 gatagccgtc cgtcggcgtc agctgctgct tctgccggca gtaggtgaac aggtcggcgc
     3001 cgacattata gtggattcca aggctcattt cctggatggc gacgttgggc gcgcaggccg
     3061 cgagctgcag gcaggcggcg agggccagcg gcccaagcgg gcagtggggg gcgacggcga
     3121 tgtcataggc ttcggccatc gcggcgatct tccggacctc tagaattccg ccggcgtggc
     3181 tgagatccgg ctggatgatg tcgaccgcgc cgctttcgaa aaaaggcttg aagtcccagc
     3241 gcgaatagag gcgctcgcca agggcgatcg gagtcgaggt aagctcggcg atctgcctca
     3301 gcccttcatg attttccgac agcaacggct cctcgataaa cagcagcccg agcggctcca
     3361 gcgccttggc aagctgtttc gccatcggcc ggtggactcg gccatggaag tcgaggccga
     3421 catccattcc aacctcctgc gccgccttca cccgctcgat gacctcgtcg aacagcttcg
     3481 gggtcccgat ccagtccagc tccgcggtcg cattcatctt gaccgcagag aagccttggt
     3541 cgcgccggcc ctgcgccgcc gacgcaatct cgtgcgggcg gtcgcctccg atccaggcat
     3601 aagcgcggat tttgtcgcgc acccgcccgc cgagcatttc ccagaccggc agtccaagca
     3661 cgcggccctt gaggtcccaa agcgcctgtt cgaggccggc aagcgcgctc atcagcacag
     3721 gcccgccgcg atagaagccg ccgggatagc cgacctgcca gatatgctcg attcggaacg
     3781 ggtcctcacc gatgaagcgg tcgcgcaagc ctgcaaacgc gccctcgacc gcttcggcat
     3841 ggccttcgag gctggcctcg ccccagccga cggcgccctc gtcgctttca acccggacga
     3901 acagccaccg tggcgcgacg tagaaagtgt cgatggtggc gatcttcatc ggccgtctcc
     3961 gctctcgaag tcgatttctt ccttgctcaa ccgctcctgc gcttcatgct cctgctcgcg
     4021 ggagctttgg gtgtcatagt gcgacggcgg gacgatcggg acggtgaggc acaggctgga
     4081 agcaggaagc acttcgcgcc agtcgcggat cagcttcttg taggcgcggc cgacgttccg
     4141 gatattgcgg ttgagatcgt agaggccgag cggattgacg tgcccgttct gctctcgaag
     4201 cgcggtgtcc cagtcgacct ggtccgtcag cgagtaccag gtgaagccca cagtcgggat
     4261 gccgacgttg cgaagcctga ggacattcgc ccattccttc cacagccact ggaccgcctc
     4321 atcgccgacg ggcccttcga ccaggttggt ttcggtgtgc atcaccggca agcggtagcg
     4381 gttgtaatat tggcgggtga tctcggtgta tccgaacacc tcgcccgaag cggtcgttcg
     4441 cccatcctcg tacaccctgt gctcgttggt ccggtaatag tcgttgccga ggatgcaatg
     4501 ctgcttcagc cggttgtgca ggaagaagtg atattcctgc cgggtcattc cgttgtccgt
     4561 gagatattcg aacatgtcgc tatcgacccg gcggccgtaa ttgaggtcca gcgacaggaa
     4621 tcggcgggag ttgagctgct cggcgatgtg gatcgccttg gggctgtcgg cgtggaaata
     4681 ttccgacgat tccgattgga tgaagatggc gtcggcgcgg cgcttcagga tcgcgagcat
     4741 cgccagcaca ttggccttga cgatatgctt gagcgcagtg acgaaagcct tgtccgaccg
     4801 cagctgctcg ttccaccagc cgtatttcgc cgagaacatc gcgcaaatga acatctcgtt
     4861 caccggcgtg tagagttgca cccacgggaa gcgctcggcg aaagcggccg cataatcggc
     4921 aaacagccgc ggaaaatcgg ggttctggaa attgccgatc cagtcgggga ccccgaagtg
     4981 gcacaagtcg acgatcggcg tgatgtcgcg ccgccgaagc tcggcgaagg tctcgtcggt
     5041 gaattcccag tcgtagcgat cggggccgag gaatgtccgg tagagcggcg ggccgtagcg
     5101 caaatagtga attccgagct cctggaccgc gtcaaaatcc tcgcgccagt gcttgtagaa
     5161 accggcaacc tccatctcgt cgattcgggt cttgccgccg ttgatcgttg ggatgctgtt
     5221 ctcgatcccg gtcgcgaaca tgaaattagc gatggctcat ctcctgtcgc agccctttgt
     5281 tcgtctccgc tcggcgccaa caccgccatg gcagcctcaa cggccgcttt gcactaacgc
     5341 tccccgcaag cggagccatg tcgctgtccc gccgttaatg gcagcagatg agcggacgca
     5401 tgcgctgggc agaaggtttc atagcggtgg attggggtac caccaatcgc cgcgcctatc
     5461 tgctcgacga aagcggatcc tgcacgagag aattcgaaga cgggcgtggt atcctttccg
     5521 tcgaacgcga gggcttcggc gccgccgtcg ccgaaatccg cgaacgcctg ggcgacaggc
     5581 ccatgctcct tgctgggatg gtcggttcga accgcggctg gatcgaagcg ccctacgtcc
     5641 cctgccccgc cgggctcgac gatctcgtga aaaacctcgc ctggccggaa gtagatcgga
     5701 cggccatcgt cccgggagtg gtctacagcg acgggcggag cgacgtgatg cgcggcgagg
     5761 agatccagat cgttggagcc gtcgcttcgg gagagatccc gagcgactgc ctcgtctgcc
     5821 atccgggcac gcacaacaaa tgggtgcggg tgagcggcgg gcggatcgag agcttccgca
     5881 ccgtgatgac gggagagctg ttcaacctgc tccgggaccg gagcattctt tcggagctga
     5941 taaccgtgcc cgcggccatc aatccggcct tttgcgacgg cgtcaggagg ggtttttcgg
     6001 gccagggcat caccgccgaa ttgttcgagg cgcgggcgcg cttcctgctc ggccatctcg
     6061 acaaggcgga gggcgcctcc ttcgtcagcg gcctgctgat cggcgaagat gtccgaatcg
     6121 gtctcggcga cacgcgcaac cgcaggataa tcgtgatggg ccggccggag ttgaccagcc
     6181 tctattcggc ggcgctcggc gagtgcgggg cgcaaggcga ggaagtggac ggcgaaggcg
     6241 cgttcatcgc cggcgcctgc aggatcgtgg agcggattga atgagcgcta gggaattgtt
     6301 cgaccgctat ttcggcgagt gcccgctggt cggcatcatc cgcggagtga ctcagcaaga
     6361 ggcagcggca attggccggg ccgtgttcga cggcggcatc cggatcatcg aggtgccgct
     6421 caattcgccc gagccgttcg ccagcatccg caacattgcc gacgcccttg gcgacgcggc
     6481 gctggtcggg gcgggaaccg ttctcgaccc cgccgacgta gcccgagtca gggacgcggg
     6541 agggcaactc atcgtctcgc cgaacatgaa tccgcaggtg atcgaagcga ctgtcgccgc
     6601 gggaatggtc tcgtcacccg gcattttcac tccgtcggaa gcctttgcgg cgctcgacct
     6661 gggcgctcat gcgctcaagc ttttccctgc cgaagccgca tcgccgtcag tggtgaaggc
     6721 gctacgggcg gtgctgccga aggacgtgcc gctggtgatt gttggaggcg taacgcccga
     6781 gtctgttcgc ggctggctcg atgccggagc ggatggcttc gggctcggtg gtggcctcta
     6841 caagcccggc cagtcgtctg agga
//
LOCUS       DATAKH010000077        20653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20474,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000077 DATAKH010000000
VERSION     DATAKH010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 20653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20653
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20474"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1044
                     /locus_tag="VHN55_02960"
     CDS             <1..1044
                     /locus_tag="VHN55_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2802931.1"
                     /translation="PSDDERWTMSALDDAVARPQLHCAIARTCDRTHEIIEANLGRSP
                     LFAGAIAGRGPRYCPSIEDKVKRFGGRDGHQVFIEPEGLADPLVYPNGISTSLPEDVQ
                     LAFVRSMAGLERVDIARPGYAVEYEFVDPRRLSTTLEVREIGSLFLAGQINGTTGYEE
                     AAAQGIAAGVNAAARALELEAVRFDRRTSYIGVMIDDLTLQGVTEPYRMMTARAEHRL
                     SLRADNATTRLGQAALAADCVSEQRRRQIEDHFEARSSTGWAETAEGRADALYAPYLA
                     RQAREWEAVTRDSRIILGDSVDYASVPGLSGEMVERLSTARPETLDQASRVPGITPAA
                     LSALHVAATRAAA"
     gene            1041..1661
                     /gene="rsmG"
                     /locus_tag="VHN55_02965"
     CDS             1041..1661
                     /gene="rsmG"
                     /locus_tag="VHN55_02965"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF014575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEX2802932.1"
                     /translation="MIDELARVIGRPVSRETVALLDHYLDCLRGESKRQNLVAESTLG
                     DAWRRHILDSAQLAALEPRPGSSWADIGSGAGLPGIVIAALVTGPVTLIEPRRLRAEF
                     LGQTIAALGLSTRVAVVATKAERAGGRFDVIAARAVANVDKLLEISTHLSTKNTQWVL
                     PKGRSAESELAAARRRWHCEAQRVPSCTDPESEILVLRNVKAKGGR"
     gene            1658..2440
                     /locus_tag="VHN55_02970"
     CDS             1658..2440
                     /locus_tag="VHN55_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006966449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEX2802933.1"
                     /translation="MIRVAIANQKGGVGKTTTAINLATALAAIGWKVLLIDLDPQGNA
                     STGLGVPPSKRERSSYDVLIGSASVEASIVATRVPRLELLPATVDLSGAEVELVGLED
                     RARRLDKALGAAPHGRWDICLIDCPPSLGLLTVNGLVAARHLLVPLQSEFFALEGLSQ
                     LLRTVERIRVAYNPELAILGVALTMFDRRNRLSQQVSDDVRACLGEAVFETVVPRNVR
                     LSEAPSHGLPALIYDLKCPGSEAYVRLARELMARLPRPAEAA"
     gene            2437..3339
                     /locus_tag="VHN55_02975"
     CDS             2437..3339
                     /locus_tag="VHN55_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEX2802934.1"
                     /translation="MSERKSSGLGRGLAALLDEAATSPESKEEGSNAQAGQGVREIEI
                     GRIRPNPAQPRSHFDEDAIAELAESIAERGVLQPVLLRPDGDNFQLVAGERRWRAAQK
                     ARLHAIPAIVRDIDDSTSAEIALIENVQRQDLNAIEEAEGYKQLVDRYGHTQEGVAKL
                     VHKSRSHVANLLRLLELPQAVKQSLLQGDISMGHARAVLTAPDPEALAREIVEKGLSV
                     RQAELLAKQARPRPTDGAPSPPASHGRQSQDPDLAALERQLGDMLGLGVKVSHNGRSG
                     TVTLRYSSLDQLDMICQRLSGETI"
     gene            complement(3344..4357)
                     /locus_tag="VHN55_02980"
     CDS             complement(3344..4357)
                     /locus_tag="VHN55_02980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEX2802935.1"
                     /translation="MKTARGTLARALDKPDPGVRFYLFYGRDEGQSRGHAERLLKGLG
                     AERFDIPGPALKADPALLADEAAAIGLFGGKRALWVEPAGDEIVAAVDAVLEAAGIES
                     PAIAIGGALRKTSPLVKLAESHPLALAHISYELDEREAERLVEDLARDEGLRLGVGIA
                     ARIAASAGNERGIIAHELGKIALYAGATPEHPKQIDRDILDEIGAGGESDGSRLGDLA
                     LLGDLESLSHELDIAAGDTEPVSVIRALQRRLLMLAPIRARVDLGARPHDAVTSAGKS
                     VFWKDKDRVAKLVSLWESKGLARVLERSGDLERRLMSKDSPPPFEALEEELIAIARTA
                     RRR"
     gene            complement(4354..4851)
                     /gene="lptE"
                     /locus_tag="VHN55_02985"
     CDS             complement(4354..4851)
                     /gene="lptE"
                     /locus_tag="VHN55_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HEX2802936.1"
                     /translation="MRLIPIAAAALALSACGLRPLYGSGPSGEVASTLRQVSVAPIPG
                     RDGWLVYNKLKERLGETGDAPAAYRLEVELDDEIIGFGIRGDRAVTRERRTLRARYRL
                     VTIANGQVVLDATAGSDAGIDVVSSEYATIAAEQTAEERLADAVADQITARLALYATR
                     MSGSR"
     gene            complement(4851..7412)
                     /gene="leuS"
                     /locus_tag="VHN55_02990"
     CDS             complement(4851..7412)
                     /gene="leuS"
                     /locus_tag="VHN55_02990"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017670066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEX2802937.1"
                     /translation="MKDSGRFDPAVADVRWQRRWDDERCFIADTDSGKPKTYVLEMFP
                     YPSGRIHMGHVRNYTMGDVLARYRRMQGFEVLHPMGWDAFGMPAENAAMERGVHPDGW
                     TRSNIAAMRDQLKRLGFALDWSREIATCDPEYYGHEQALFLDLYEAGLVYRKESEVNW
                     DPVDMTVLANEQVIDGKGWRSGAEVERRKLSQWFLKITDFADELLDGLEGLGDWPEKV
                     KLMQANWIGRSDGLRFRFEIAGEGAECDYPWVKAALAAAPEVEVFTTRPDTIFGASFV
                     AIAPDHPLAQAVASENPDAAAFIAESKAGGTSAAEIETQEKRGFLTGLQAVHPLEPDW
                     RLPVWIANFVLMEYGTGAVFGVPAHDQRDFEFATKFDLPIRRVVARADQDKDTPIGDE
                     AEPGEGVIVNSRFLDGLSVDEAQQAVIRRAEDEGWGTRKTVYRLRDWGVSRQRYWGTP
                     IPMIHCERCGPVAVPRDQLPVLLPDDVSFDIPGNPLDRNEAWRNAACPQCGGDARRET
                     DTFDTFVDSSWYFIRFASQPIDKPFDSSEAEQWLPVDQYIGGVEHAILHLLYARFWTR
                     ALKRIGRLDIDEPFSGLFTQGMVTHETFRGADGRWLAPDEVRKDDQGNPIDAAGVPAT
                     RGRVEKMSKSKRNTVDPEPIVAKYGADAVRWFMLSDSPPERDLEWSEAGIEGAARFVQ
                     RVWRLASGSAGGEGEDAALARRVNRAVAAVGEAVDSLQFNKAVAQLYELVSAIEKAPP
                     SSDRTKAVRTLVKLVAPMAPHLAEECWESLGEDGLVVTSEWPKFDPALLVEDEVTLAV
                     QINGKLRDTLTAPRGLDRAEAEALALASDKVQRQLAGASPRKVIVVPDRLVNIVA"
     gene            complement(7428..7817)
                     /locus_tag="VHN55_02995"
     CDS             complement(7428..7817)
                     /locus_tag="VHN55_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008831529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3576 domain-containing protein"
                     /protein_id="HEX2802938.1"
                     /translation="MVVAGCARNRSVPTQLAPSTMTTIGVNGYLWKAALDTVSFAPLL
                     QADANSGVIITDWYANPRSPGERVKLTVTILDQDLRADALRVAASRQVLQNGTWIEAP
                     VTAATVQKLEDIILTRARDIRRTTVTG"
     gene            8045..8749
                     /locus_tag="VHN55_03000"
     CDS             8045..8749
                     /locus_tag="VHN55_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEX2802939.1"
                     /translation="MNLGRFRTAKLAAALAAAGLLSPAIAANDSQKRPPAIALSVSPD
                     LQFTPASADPRLAAAFSGRASSQLGEFKFTPAASKARPSQVRVAIRARATTPREVGLT
                     SGSPVSALAPVSYNLGVAVGWRRFAISGDVAKVKPAGSPIDGRNSAVVGVSYSLPRFT
                     GRVAVSADRSEGQSAPALRDPDKYALDVGGSYSLTKRIAVTGGVRYKVETDRLSTLSD
                     NRVDSQAVYIGTAFKF"
     gene            complement(8945..9289)
                     /locus_tag="VHN55_03005"
     CDS             complement(8945..9289)
                     /locus_tag="VHN55_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802940.1"
                     /translation="MTRRQTSVPRQWLIADERIGDDLWPAIRRLPRGSGVLVIYRSLD
                     KRRRARLLSRLRLIARSRGLVLADEAAGEAARVHDSREIRRAGLAGVPLLLVSPLFAT
                     RSHPERAPLPRM"
     gene            9312..9974
                     /locus_tag="VHN55_03010"
     CDS             9312..9974
                     /locus_tag="VHN55_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010214490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEX2802941.1"
                     /translation="MSSAEDSRRTALDTIASEAKVAGRRSSEVTLIAVSKTRSADEIE
                     SLIAAGQRDFGESRVQEALDKWPPLLARYPEVRLHCIGRLQSNKAADSARLFHSIHSL
                     DRPSLLNALAAAAEKAGRSPSVYIQVNIGDEPQKGGCAIAEVGGLIEAVRKSPLPLAG
                     LMCIPPLGLDPSPFFALLAKIAREHDVDGLSMGMSADFRAAVMLGATAVRVGTALFEG
                     PD"
     gene            complement(9971..11020)
                     /gene="ribA"
                     /locus_tag="VHN55_03015"
     CDS             complement(9971..11020)
                     /gene="ribA"
                     /locus_tag="VHN55_03015"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010542671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEX2802942.1"
                     /translation="MSEAGALRRAIAVLKAGGGVRIDSTPPLTVLSVETADPETLDAF
                     DPTGEARLLISGWRAAALSLGNRRDSADASEPVLIERAPWLGVDEARAISDAGQDASR
                     APLGPLTPIPLPEGEQFAAALKLARMAGLLPALWVAIGSSGAAEIAPEAIAAAALEVT
                     PVARARLPLEDMPETQIAVFRASDGEEHVALVIGAFAGKPPLVRLHSECLTGDVFGSL
                     KCDCGPQLKEALRLIAAAGGGILLYLRQEGRGIGIANKIRAYALQDRGFDTVDSNLRL
                     GFADDERDYEQAAAILRSLGVDEVRLLTNNTSKVAGLEKAGIRVSERVGHHMPANPHN
                     ADYLATKREKSGHLP"
     gene            complement(11017..11811)
                     /locus_tag="VHN55_03020"
     CDS             complement(11017..11811)
                     /locus_tag="VHN55_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX2802943.1"
                     /translation="MSKRLKIASWNINSVRARSALVEKLIAQEQPDILCLQETKVLDD
                     IFPADLFHRHGYRHHQLNGQRMHHGVAILSRVPLEEPGKHDWQDNGEARHVGARLPCG
                     IRLENVYVPAGGDIPDRDLNPKFGQKLDFIERMTRWSETLFEPTLIVGDFNVAPLECD
                     VWSHKALLKVVSHTPVEVEALTRLQQAHEWIDIGRRFVPAPERCFTWWSYRSPDWTKN
                     DRGRRLDHMWASPSLAGHLAGHSVLEPCRSWERPSDHVPLICELSL"
     gene            complement(12017..12637)
                     /locus_tag="VHN55_03025"
     CDS             complement(12017..12637)
                     /locus_tag="VHN55_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010184240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEX2802944.1"
                     /translation="MSFATSFARALVPAAILVAPAAVNASSASDLNLVKAHLRSVDSM
                     TASFTQTDSKRRTMSGTLQLKRPGRIRFEYGGGVDVLLVANGKTLTFLDYDVGQKSSW
                     DLNKTPLGILLADNPNLDRIAKIVPNKDPRVVVVNAVNPAHREYGRLVLAFIREPNSP
                     GGLRLYGWTAIDAQGKQNVVKLSNQRYNVAIPASAFTYAEPKKKGR"
     gene            complement(12737..15055)
                     /locus_tag="VHN55_03030"
     CDS             complement(12737..15055)
                     /locus_tag="VHN55_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEX2802945.1"
                     /translation="MATAAARPSKDMGPDWRDKLRESMRRLARRSWGAALVALAVAGA
                     LALASHSSTDASFTTAAGGAAGNWLGRVGAYGSDLAFLLFGIGAVLLLPVIALAGLRM
                     LRLEPAGRVRRGMLLASAAAILIGIALSLTSGSAVSGLPAGWGGAIALAAANGIDGLV
                     ALIPDPRFVQPTRLGVLVLFAAAGLVLAWLAVALTEDERAWLHGIFSRSPERKRAPRK
                     TQEPRDERGSIAAPPKPRPAVSVSEPAAAPSRSKSPPSRRPAAQPGLALGDSYTLPDI
                     GLLAPPPEKGRTQIDRAALERNARILESVLEDFHVRGNIVEVKPGPVVTMYELEPASG
                     IKASRVIQLADDIARNMQAISARVAIVPGRSVIGIELPNARRESVTLSQLIASDAFAD
                     DGVGLPLILGKNIAGDPIVADLAPMPHLLVAGTTGSGKSVGLNCMILSLLYRLDPDEC
                     RMILIDPKMLELSIYEGIPHLLAPVVTEPGKAIRALKWTVEQMEERYRMMANLGVRAL
                     PSFNQKVRDAKAKGAQLGRRVQTGYNAETGQPIYEMEQLDYDVLPQIVVVVDELADLM
                     MTAGKEVEFLIQRLAQKARAAGIHLIMATQRPSVDVITGVIKANLPTRISFQVTSKID
                     SRTILGEQGAEQLLGKGDMLYMPGGKQILRVHGPFVSDEEVRAVAEHWRRQGTPEYIQ
                     AVTEEPDDGDYLFDGQPTGEDDPETQLYRKAVQIVAESQKASVSYLQRQLRVGYNSAA
                     RLIERMEKDGKVGMPDHVGRREVLIDLDGHPL"
     gene            15179..16396
                     /locus_tag="VHN55_03035"
     CDS             15179..16396
                     /locus_tag="VHN55_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX2802946.1"
                     /translation="MDRADVIILGGGLVGLALAAALDSSGLSAVVIDPADPDQRLDAA
                     FDGRTSAVSSSSMRMLEATGVADCFPAPGCPILKIQVADGLDPGGLAFEPGEYDGPLG
                     WMHENRNLRAALRARAEAGKKLWLLWKSRIAAIDRGQHSVVAALEDGRKVMAPLVVAA
                     DGRNSPMREQAGLRMARWRYDHVAIVSVLHHKRPHDHVAYEIFYPGGPFALLPMTDDG
                     RRHRSAIVWSVQKDDGPGFLSLSDEDFAAEAEKAMGGFLGKVALAAPRSTYPLGFHHA
                     SNITAQRLALVGDAAHAIHPIAGQGLNLGFRDAAALAQVLVEGARLGLDLGDKQLLDR
                     YQRWRSLDSLMVGIATDSLTRIYGVPGRSASAVRRFGMGLIDRIAPIKDRLMNEARGT
                     SGDLPLLLRGLPI"
     gene            complement(16398..17042)
                     /locus_tag="VHN55_03040"
     CDS             complement(16398..17042)
                     /locus_tag="VHN55_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX2802947.1"
                     /translation="MSGALPLRAPLFPIPGAILFPRAQLPLHIFEPRYREMVRDAVDG
                     DGLIAVVQPQLVEVEDDSKQPLYPVGCVGEIVGLEELEDGRSNIVLNGTNRFRIVTEV
                     DLHTPYRNADLDVGAFDDREPEPLGIAQRAEVEREARRLGDSLGLAVDWSAVSRLDDE
                     MLVNAIAQVAPFDVSAKQALLESNALADRADLLVQLMQFLRLSQGGTDLQPTLQ"
     gene            complement(17039..17947)
                     /locus_tag="VHN55_03045"
     CDS             complement(17039..17947)
                     /locus_tag="VHN55_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017500243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2802948.1"
                     /translation="MATLGLSEAEREAVAKLERDVIQPSMSHLVLLDFWADWCGPCKQ
                     LSPVLEKIATDYAAKGVKLVKIDVEADKVIAAQFRVQSIPTVYAFYQGQPVADLTNYR
                     TEGQLTRILDQLIAQLGVGDEPEPAKAEIGPLIAMGDEVLAGGDAERAVNIFRQVRDM
                     APDDAAAAGGLVRALIANGETDEAKALLDGLPAELASDSAIGRARAALETASAGAASD
                     ASELEQKVAANPDDLQARYDLAGASMAAGDRDRAADELLAIIERDKEWNEGVARKRFL
                     QLLEAQGLEDEWARAQRRRLSALLFT"
     gene            18106..18180
                     /locus_tag="VHN55_03050"
     tRNA            18106..18180
                     /locus_tag="VHN55_03050"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18138..18140,aa:Gly,seq:gcc)
     gene            complement(18209..18844)
                     /locus_tag="VHN55_03055"
     CDS             complement(18209..18844)
                     /locus_tag="VHN55_03055"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020486535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008198 - ferrous iron binding [Evidence
                     IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX2802949.1"
                     /translation="MTRSDEDCPARRLAITPGIQRVPSPKLDLFILRGFLDPGACAAL
                     IERIDSRRRPSTIADDAGIENFRTSETCDLDPSDPLVADVDRKICDLFGLAPAKGELI
                     QGQRYAQGQEFRAHTDTFNPGGYDYYVHTADSGQRTWTAMVYLNAPEYGGGTRFKVIG
                     KTVQPETGKLLAWNNQLADGRPNEATIHQGLKVRRGVKYIVTKWFRERPLG"
     gene            complement(18831..19952)
                     /gene="bla"
                     /locus_tag="VHN55_03060"
     CDS             complement(18831..19952)
                     /gene="bla"
                     /locus_tag="VHN55_03060"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF033103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class A beta-lactamase"
                     /protein_id="HEX2802950.1"
                     /translation="MTSLWSRFGLALALAGLTQVGAAAIKTAERPEQPKHAAKPEVRV
                     AQAAPRPAAPTPPRAPAYLSERLDALGKAFDGRVGIAVRSVDEGWETGWKDDELYPQQ
                     SVSKLWVAITALDAVDKGKVRLDDRVTLTRSDLTLFHQPIRAKILSGGYTTSLEDLME
                     KAITTSDNTANDKLMRSVGGADAVRRMIAAKRLGAIRFYDGERALQSKIAGLIWSQSY
                     SIGGGFFEARNALPMAVRRAAFNRYVDDPYDGASASAIVSALARLKKGELLSPASTAR
                     LLNIMGNTRTGPNRLKGGLQPGWTLSHKTGTGQELAGVQAGYNDIGILTSPDGKSYTV
                     AVMIKKTSTPLPVRMALMNNVVKAVIRQHEMAKGTDYAL"
     gene            complement(20070..>20653)
                     /locus_tag="VHN55_03065"
     CDS             complement(20070..>20653)
                     /locus_tag="VHN55_03065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802951.1"
                     /translation="IAEQIGALQARIQRVESETEKAQGSEGRADALLIAFAARRAIER
                     GVALGYLEPLLVQRFGPDHPQAVATIVTASRSPVRLTTLIADFQDLEQQLVGPPPNED
                     LWTGFKRGFSSLVTVRRSDRPSTKPKARFNRALAHLTAGEVDSALAETMRLPGAPRAG
                     DWIRDARRYVAVHRALDEIESAALVGAPPTPRP"
BASE COUNT         3285 a         6936 c         6823 g         3609 t
ORIGIN      
        1 cccagcgacg acgagcgctg gaccatgtcg gcgctggacg acgcagtggc tcgcccgcaa
       61 ctgcattgcg cgatcgcccg cacctgcgac cgaacgcacg agatcattga ggccaatctc
      121 ggtcgctcgc ccttgttcgc gggagcgatc gccgggcgcg gtccgcgcta ctgtccgtcg
      181 atcgaagaca aggtgaagcg attcggcggc cgcgacggcc accaggtttt tatcgagccc
      241 gagggtctcg cggacccgct ggtctacccc aacggcattt cgacgtcgct cccggaagac
      301 gtgcagctgg cgttcgttcg gtcgatggcg ggcctggagc gggtcgatat cgctcgcccc
      361 ggatatgccg tcgaatatga gttcgtcgac ccgcggcggc tttcgaccac gctggaggtg
      421 cgcgaaatcg gcagcctgtt tcttgccggc cagatcaacg gcaccaccgg ctacgaggag
      481 gccgctgccc aaggcatagc cgccggcgtc aacgccgccg cgcgcgcgct tgagctggag
      541 gccgtccgct tcgaccgtcg cacttcctac atcggcgtga tgatcgacga cctgacgctg
      601 caaggcgtta ccgagccgta tcggatgatg acggcacggg ccgagcatcg tctgtcattg
      661 cgagccgaca atgcgacgac tcggctcggt caggccgcac ttgctgccga ttgtgtttcc
      721 gagcagcggc gccgacagat cgaggatcat ttcgaagcgc gctcatcgac cggctgggcc
      781 gagacagccg aaggccgcgc cgacgccctt tatgctcctt atctcgcaag gcaggctcgg
      841 gagtgggagg cggtcacgcg cgactcgcga atcattctcg gagattcggt ggattatgcc
      901 tccgtgcccg gtctttccgg cgaaatggtg gagcgattgt ccacagcacg cccggaaacg
      961 ctggaccagg cttcccgcgt gccgggaatc acgccggcag cgctgtcggc acttcacgtc
     1021 gccgcgaccc gcgctgcggc atgatcgacg agctggcgcg ggttatcggc cggcctgttt
     1081 cacgtgaaac agtggcgctg ctcgaccatt atctcgactg tctcaggggc gaatcgaagc
     1141 gccagaacct ggtcgccgaa tcgacgctcg gggacgcctg gcggcggcat attttggact
     1201 cggctcagct tgctgcattg gagccgagac cgggttcgtc gtgggccgac atcggatcgg
     1261 gtgccgggct ccccgggatc gttatcgcgg cgcttgttac cgggcccgtg acgctgatcg
     1321 aaccgcgacg gcttcgcgcc gagttcctcg gccagacgat cgccgcgctt ggcctttcaa
     1381 cgcgtgtcgc agtcgtcgcg acgaaggccg aacgagccgg cggccggttc gatgtcatag
     1441 ccgcccgagc agtcgcgaat gtcgacaagc tgctggagat atccacgcat ctgtccacaa
     1501 aaaatacgca gtgggtgctt ccgaagggcc gaagcgccga atccgaactg gccgcggcgc
     1561 ggagaaggtg gcactgtgag gcgcagagag tgccgagctg caccgatccc gaatccgaga
     1621 tcctggtgct tcggaacgtc aaggcgaagg gtgggcgatg attcgcgtcg cgatcgcgaa
     1681 ccagaagggc ggagtcggca agacgaccac cgcgatcaat ctcgccaccg cgcttgcggc
     1741 gatcgggtgg aaggtgctgc tgatcgacct cgatccgcag gggaatgcct ccaccggcct
     1801 cggtgtaccc ccttccaagc gggagcgctc tagctacgac gtgctgatcg gctcggccag
     1861 cgtcgaagcc agcatcgtcg ccacccgggt tccgcggctg gagcttctgc cggcgacggt
     1921 cgacctgtcg ggcgctgaag tggagctggt cgggctggaa gaccgcgccc gccgcctcga
     1981 caaggccctc ggcgctgcgc cgcacggtcg ctgggacatc tgcctgatcg attgtcctcc
     2041 ctcgctgggc ttgctgacgg tcaacggcct tgtcgcggcg cgccacctgc tggtcccgtt
     2101 gcagtcggaa ttcttcgcgc tggaagggct tagccagctc ttgcggacgg tggaaaggat
     2161 ccgagtcgcc tataatccgg agctcgcgat cctcggcgtc gcgctgacca tgttcgaccg
     2221 gcgcaaccgc ttgtcgcagc aagtgtcgga tgacgtccgg gcctgcctgg gcgaagcggt
     2281 gttcgagacg gtggttccgc gcaacgtccg tctgtcggaa gccccgagcc acgggctccc
     2341 ggcgctgatc tacgacctga aatgtcccgg ctcggaagcc tatgttcgcc ttgcccggga
     2401 gcttatggcg cggcttccgc gtccggcgga ggcagcatga gcgagaggaa aagctccggc
     2461 ctcggccgtg gcctggcagc gctgctcgac gaggctgcaa cgtcgccgga atcgaaagaa
     2521 gagggctcga acgcgcaggc gggacagggc gtccgcgaga tcgagatcgg ccgaatccgg
     2581 cccaatcccg cgcagccccg gagccatttc gacgaagacg caatagccga gcttgccgaa
     2641 tcgatcgccg agcgcggcgt tctccagccg gtcctgcttc ggcccgacgg cgacaatttc
     2701 cagctcgtgg ccggggaacg gcgctggcgc gcggcgcaga aggcgcggct ccacgcgatc
     2761 ccggcgattg ttcgcgacat cgatgattcg acgtcggcag aaatcgcgct gatcgagaat
     2821 gtgcagcgcc aggacctcaa tgcgatcgag gaagccgagg gctacaaaca gctcgtcgac
     2881 cgctacggcc atacccagga aggtgtcgcc aagctcgtcc acaaatctcg gagccacgtc
     2941 gctaaccttt tgagattgct ggaacttccg caagcggtga agcaatcgct attgcaaggc
     3001 gatatcagca tgggccatgc gcgggcggtc ctcaccgcgc cagatcccga agcgctggcc
     3061 cgcgaaatcg tcgagaaggg gctttcggtc cgccaggcgg agcttctggc caagcaggcc
     3121 cgcccacggc ccaccgacgg cgcgccaagc ccgcccgcca gccacggccg gcagtcgcag
     3181 gaccccgatc tcgccgctct cgaacggcag ctcggggaca tgctcggcct tggcgtgaaa
     3241 gtgtcacaca acggccgcag cgggacggtg accctgcgct actcgagcct cgatcagctc
     3301 gacatgatct gccagcgcct cagcggcgag acgatttagc ccgttatcgc cggcgcgcgg
     3361 tcctggcgat cgcgatcaat tcctcttcca gcgcttcgaa cggcggtggc gaatccttgc
     3421 tcatcagccg ccgctccaga tcgccggagc gttcgagcac ccgggcgagt cccttcgatt
     3481 cccacagcga caccagtttc gctacccggt ctttatcctt ccaaaacacg gacttgcctg
     3541 ctgacgtcac ggcgtcatga ggccgcgctc cgagatccac gcgagcccgg atcggggcca
     3601 gcatcagcaa ccgccgctgc agcgcccgaa tgaccgaaac cggctccgtg tcgccagcag
     3661 caatgtccag ctcgtgtgaa agcgattcga gatctccgag aagcgccagg tctcccaacc
     3721 ggctgccgtc gctctcgccc ccggcgccga tctcgtcgag gatatcgcgg tcgatctgct
     3781 tggggtgttc gggggtcgcc ccggcatata gcgcgatctt gcccagctcg tgggcgatga
     3841 tcccgcgctc gttgcccgcc gacgccgcaa ttcgcgccgc gatcccgacg ccaaggcgca
     3901 gtccctcgtc ccgggcgaga tcctcgacca gccgttccgc ctcgcgctca tcgagctcgt
     3961 acgagatatg cgccagagcc agcgggtgac tttcggcaag cttgaccagc ggcgatgtct
     4021 tgcggagcgc gccgccgatc gcgatcgccg ggctttcgat tcccgccgcc tcgagaacag
     4081 cgtcgacggc cgcgacgatt tcgtcccccg ccggctcgac ccatagcgcc cgcttgccgc
     4141 cgaacaggcc gatcgccgcc gcttcgtcgg cgagcagcgc cggatcggct ttcagcgccg
     4201 ggccggggat atcgaacctc tcggccccaa gccccttaag cagccgctcg gcgtgcccgc
     4261 gcgactgtcc ctcgtcgcgg ccgtagaaga ggtagaagcg gacgccggga tccggcttgt
     4321 cgagcgctcg ggcgagtgtt ccccttgccg tcttcaccgc gacccgctca tccgagtcgc
     4381 atagagtgcg agccgggcgg tgatctggtc ggcgaccgcg tcggcgagcc gctcctcggc
     4441 tgtctgttcg gccgcgatcg tcgcatattc cgagctgacg acgtcgattc ccgcgtcgga
     4501 gcccgccgtg gcgtcgagga cgacctggcc gttggcgatc gtcaccagcc gatagcgcgc
     4561 ccgaagcgtc cgccgctcgc gcgtgaccgc gcggtcgccc cggatcccga agccgatgat
     4621 ctcgtcgtcg agctcgacct cgagccggta ggcggccggg gcatccccgg tctctccgag
     4681 acgctccttg agcttgttgt aaacgagcca gccgtcgcgg ccgggaatgg gcgcaacgct
     4741 gacctggcga agagtgctcg caacctcgcc cgagggcccc gagccgtaca gcggcctcag
     4801 tccgcaggca gacagcgcca gcgctgccgc ggcaattggg atcaggcgca tcacgcgacg
     4861 atattgacca acctgtcggg gaccacaatc actttgcgcg ggctcgctcc ggcaagctgc
     4921 ctctggacct tgtcggaggc aagcgcgagc gcctcggcct cggcccggtc gagaccgcgc
     4981 ggagccgtca gcgtgtcgcg cagcttgccg ttgatctgga cggccagcgt cacttcgtcc
     5041 tcgacaagta gcgccgggtc gaacttcggc cactcgctgg tgaccacgag accgtcctcg
     5101 ccaagggact cccaacattc ctccgctagg tgcggcgcca tgggagcgac cagcttgacc
     5161 agggttcgaa cggccttcgt gcggtcggac gaaggcggcg ccttctcgat tgccgacacc
     5221 agctcgtaga gctgggcgac ggccttgttg aactggagcg agtcgacggc ctcgccgact
     5281 gcggccacag cccggttgac ccttcgcgcg agcgcagcgt cctcgccctc gccaccggcc
     5341 gaaccgctgg ccagccgcca cacgcgctgg acgaagcggg cggcgccttc gattcccgct
     5401 tccgaccatt cgaggtcacg ctcgggcggg ctgtcggaaa gcatgaacca gcgcaccgcg
     5461 tcggcgccgt acttggcgac gatcggctcg ggatcgacgg tgttgcgctt cgacttggac
     5521 atcttctcga cccggccgcg agtcgccggc accccggcgg cgtcgatcgg attgccctgg
     5581 tcgtccttgc gcacttcgtc gggggcgagc cagcggccat cggcgccgcg gaaggtctcg
     5641 tgcgtcacca tcccctgcgt gaacagccca ctgaatggct cgtcgatgtc gagccggccg
     5701 atccgcttca gcgcgcgggt ccagaagcgc gcgtagagca ggtgcaggat cgcatgctcg
     5761 accccgccga tatattgatc gaccggaagc cactgctcgg cctcgctgct gtcgaacggc
     5821 ttgtcgatcg gctggctggc gaagcggatg aagtaccagc tcgaatcgac gaacgtgtcg
     5881 aacgtgtcgg tttcgcgccg ggcgtcgccg ccgcattgcg ggcaagccgc gttgcgccag
     5941 gcctcgtttc ggtcgagcgg gttgccggga atgtcgaagc tgacgtcgtc cggcaggagc
     6001 accggcaact ggtcgcgcgg aaccgcgacc gggccgcacc gctcgcagtg gatcatcggg
     6061 atcggcgtcc cccaatagcg ttgccgggag acgccccagt cgcgcagccg gtaaacggtc
     6121 ttgcgcgtac cccagccctc gtcctcggcg cggcggatca ccgcttgctg cgcctcgtcc
     6181 accgacagtc cgtcgaggaa gcgcgaattg acgatcacgc cctcgccggg ctcggcctcg
     6241 tcgccgatcg gcgtgtcctt gtcctggtcg gcacgggcga ccacgcgccg gatcggaagg
     6301 tcgaacttgg tcgcgaactc gaagtcgcgc tggtcgtgag cgggaacgcc gaacacggcg
     6361 ccggtcccat attccatcag cacgaaattc gcgatccaca ccggcagccg ccagtcgggc
     6421 tcgagcggat gaaccgcctg gagcccggtc aggaatcccc gcttctcctg ggtctcgatc
     6481 tccgccgcgc tcgttccgcc ggccttggat tcagcgatga aggcggcggc gtcgggattt
     6541 tccgaagcga ccgcctgcgc caacggatgg tcgggggcga tggcaacgaa gctggcgccg
     6601 aagatcgtgt ccggccgggt ggtgaagact tcgacctcgg gcgccgcggc gagcgccgcc
     6661 ttgacccagg gatagtcgca ttccgcgcct tcgcccgcaa tctcgaagcg gaatcgcagc
     6721 ccgtcggagc ggccgatcca gttcgcctgc atcagcttca ctttttcggg ccagtcgccg
     6781 agcccctcga gcccgtcgag gagttcgtcg gcaaagtcgg tgatcttcag gaaccattgc
     6841 gacagcttgc ggcgctcgac ctcggcgccg gaacgccaac ccttgccgtc gatgacctgc
     6901 tcgttggcga gcaccgtcat gtcgactggg tcccaattga cctcgctctc cttgcggtag
     6961 accaggcccg cttcgtagag atcgaggaaa agcgcctgct cgtgcccgta atattcgggg
     7021 tcgcaggtgg cgatctccct gctccagtcg agggcgaagc cgaggcgttt cagctggtcg
     7081 cgcattgccg cgatgttcga ccgggtccag ccgtcggggt ggactccgcg ttccatcgca
     7141 gcattctccg ccggcatccc gaatgcgtcc cagcccatcg ggtggagcac ctcgaagccc
     7201 tgcattcgcc ggtaacgggc gagcacgtcg cccatcgtgt aattgcggac gtggcccatg
     7261 tggatccgcc ccgacggata agggaacatc tccagcacgt acgtcttggg cttgccgctg
     7321 tccgtgtcgg cgatgaagca gcgctcgtcg tcccagcggc gttgccaccg gacgtcagcg
     7381 actgccggat cgaagcggcc cgagtccttc acaggacggc cctggtttta gcctgtgact
     7441 gtggtgcggc ggatgtcacg ggcacgggta agaatgatgt cttcgagctt ctggacagtc
     7501 gctgcggtca ccggcgcctc gatccacgtt ccgttctgaa gcacctgccg cgatgcggcg
     7561 actcgaaggg cgtcggcgcg caggtcctgg tcgaggatcg tgacggtcag cttcacgcgt
     7621 tccccggggg acctcgggtt ggcgtaccaa tcggtgatga tgactccgct gtttgcgtcg
     7681 gcctggagca gcggcgcgaa cgaaacggtg tcgagtgcgg ccttccacaa atagccattc
     7741 actccgatgg tggtcatcgt cgacggagcg agctgcgtcg gcacgctgcg gttccgagcg
     7801 cacccggcga ccaccattgc ggcgagagcg agagcggcaa cacttgttgt gaggcggggc
     7861 atcggcaatc ctcgactgtg acgtttgcgt tggcgttata gatgctggcg caaggccgca
     7921 agcggtggct ggacggcgca ggttgttgtc gaagtgcaac agactcgcag cgaatcgagt
     7981 cgagtcatgg aaccttcaga ttgccgagcc tatatgtaat ccgcggaaca gggagttggc
     8041 aggcgtgaat ctcgggcgtt tcaggacagc caagctcgcc gctgcgcttg cagcggccgg
     8101 cctgctgtcg cccgcgattg ccgcaaacga ctcgcagaag cgcccgcctg caattgccct
     8161 cagcgtcagc cccgacctgc aattcacgcc ggcatccgcc gatccgcggc ttgccgctgc
     8221 gttttccggc cgcgcttcgt cgcagctggg agaattcaaa ttcactccgg ccgcgtcgaa
     8281 ggcaaggccg tcgcaggtgc gggtcgcgat tcgcgctcgc gcaaccactc ctagggaagt
     8341 cggcctgacc tccggctcgc cggtcagcgc gcttgcaccg gtcagctaca atctcggagt
     8401 ggcagtgggc tggaggcgtt tcgccatttc cggcgacgtc gccaaggtga agccggccgg
     8461 atcgccgatc gacggccgta acagcgcggt cgtgggcgtc agctattcgc tcccgcgttt
     8521 caccgggcga gtggcggttt ccgccgaccg ctccgaaggc caatcggctc cggcgcttcg
     8581 cgatcccgac aaatatgcgc tcgacgtcgg cggctcctac tcgctgacca agcgcatcgc
     8641 ggtgaccggc ggggtgcggt acaaggttga gaccgaccgt ctttcgacgc ttagcgataa
     8701 ccgcgtcgac agccaggccg tctacatcgg gaccgctttc aagttctagg ctgacctcct
     8761 cgctgacagc tggctaacgt cacggttttg gcgcctcatc gcgtgacttt agtgacttta
     8821 agagccacgc gtcgatcccc gcccagccgc aaaagccaag cttctcgacg ctcctgaacc
     8881 tcgattctgt cattccaccc agggcgatcg cgggcgctct cgccagcctc aggagcgccg
     8941 cggcctacat ccggggaagt ggcgcccgct ccggatggct gcgcgtcgca aacagcggcg
     9001 agaccaacaa cagcggcacg ccggcgagcc cggcacgtcg aatctccctg gagtcatgga
     9061 cccgcgcggc ctctccggcc gcttcgtcgg cgaggaccag cccgcggctt cgggcaatca
     9121 ggcgcaatct cgacagcagc cgcgctcgcc gccgcttgtc caggctccga tagatgacga
     9181 gaactccgct tcctctcgga agccgccgga tcgccggcca cagatcgtcg ccgattcgct
     9241 cgtctgctat cagccactgg cgcgggacgc tggtctggcg gcgggtcatc gcggttccta
     9301 tagccgctcg aatgagcagc gccgaagaca gccgccgcac tgccctcgac actatcgcct
     9361 cggaagcgaa ggtcgcgggg cgtcgatcct cggaagtcac gctgatcgcg gtcagcaaga
     9421 cccgcagcgc cgatgaaatc gaatcgctga tcgccgccgg ccagcgcgat ttcggggaaa
     9481 gccgggttca ggaggcgctc gacaaatggc cgccgctgct cgcccgctac cccgaagtgc
     9541 gcctccactg catcggccgg ctgcaatcga acaaggcggc cgactctgcc cgcctgttcc
     9601 attcgatcca ttcgctcgac cgcccgtcac tcttgaacgc gctcgccgcc gcagccgaaa
     9661 aggcggggcg ctcgccttcg gtctatatcc aggtgaatat cggcgacgag ccgcagaagg
     9721 gcggctgcgc gattgccgag gtcggcgggc tgatcgaagc cgtgcgcaag tcgccgctgc
     9781 cgctcgccgg gctgatgtgc atcccgccgc tggggctgga cccgtcgcct ttcttcgccc
     9841 tcctcgcgaa gatcgcccgt gagcacgatg tcgacggact cagcatgggg atgtcggcgg
     9901 acttcagggc cgcggtaatg ctcggagcga cggccgtgcg ggtcggaacc gcgcttttcg
     9961 agggcccgga ctaaggaagg tgcccgctct tttcgcgctt ggtcgcgaga tagtcggcat
    10021 tgtggggatt ggccggcatg tggtggccga cccgttccga aacgcggatt cccgcctttt
    10081 ccagccccgc taccttggat gtgttgttcg tcaggagccg cacctcgtcc acgcccaacg
    10141 agcgaaggat cgccgccgcc tgctcgtaat cgcgctcgtc gtcggcaaag cccagccgga
    10201 ggttcgaatc cacggtgtcg aagccgcggt cctgaagcgc ataggcgcgg atcttgttgg
    10261 cgatcccgat cccgcgccct tcctggcgca ggtaaaggag gattccgccg ccggctgcgg
    10321 cgatcaggcg gagcgcctct ttcagctgcg gcccgcaatc gcatttgagc gagccgaaca
    10381 cgtcgccggt caggcactcg ctatgcagcc gaaccagcgg cggcttgccc gcgaaggcgc
    10441 cgatcacgag cgcgacatgc tcttccccgt cgctcgcccg gaacaccgca atctgggttt
    10501 cgggcatgtc ctcgagcgga aggcgggcgc gggccaccgg agtcacctcg agcgccgctg
    10561 cggctatcgc ctcgggggct atttcggcgg cgccgctgct tccgatcgcg acccacagtg
    10621 ccggaagcag tcccgccatt cgcgcgagct tcagcgcggc ggcgaattgc tcgccttcgg
    10681 gcagcggaat gggggtcagc ggaccgagcg gcgcccggct cgcatcctgg ccggcatcgg
    10741 atattgcgcg cgcctcgtcg actccgagcc acggcgcccg ctcgatcaga accggctcgg
    10801 aagcatcggc ggaatcgcgc ctgttcccga gcgacaatgc cgccgcccgc catccgctga
    10861 tcagcagtcg cgcctcgccc gtcggatcga aagcgtcgag ggtttccggg tccgcggtct
    10921 cgacggaaag caccgtcagc ggcggcgtcg aatcgattcg gacgccgccg cccgccttca
    10981 gaacggcgat cgctcggcgg agggcgccgg cttcgctcaa aggctgagct cgcagatcag
    11041 cggcacatgg tccgacggcc gctcccagct ccggcacggc tcgagcaccg agtggccggc
    11101 gagatggccg gcgagcgagg gcgatgccca catatggtcg agcctccggc cgcggtcatt
    11161 cttcgtccag tccggcgagc ggtagctcca ccaggtgaag cagcgttccg gcgccggcac
    11221 gaagcgccgg ccgatatcga tccactcgtg cgcctgctgg aggcgggtga gcgcctcgac
    11281 ctcgaccggc gtatggctga cgaccttgag cagcgccttg tggctccaca cgtcgcactc
    11341 gagcggagcg acgttgaaat cgccgacgat cagggtcggc tcgaacagcg tctccgacca
    11401 acgggtcatg cgctcgatga agtcgagctt ctgcccgaac ttggggttca ggtcgcggtc
    11461 cggaatgtcg cctccggccg gcacatagac attctcgagc cggattccgc atggcagccg
    11521 agctccgacg tggcgggctt cgccattgtc ctgccagtcg tgcttgccgg gctcctccag
    11581 cggcacacga ctgagaattg ccacgccgtg gtgcatcctc tggccattga gctggtggtg
    11641 gcggtagccg tgacggtgga acaggtcggc cgggaagatg tcgtccagca ccttggtttc
    11701 ctgaaggcac aggatgtcgg gttgttcctg cgcgatcagc ttctcgacaa gggcactgcg
    11761 cgcccgcacc gagttgatgt tccaggaagc gattttcagc cgtttgctca cagatcccgc
    11821 ttagcccgtc cgtccccaca agaaaaaggc cctcgctccg ggggcgtgga gcgagggccg
    11881 accaagcgtt cgtcacgcaa ggggtggccg cggcaagggt aacaggggga aaccccaagc
    11941 cttatgcggc aaccgtaccc gttttaggac agcgttgctg acggcgcgat gaacaggttt
    12001 taatctgcta cgtttttcag cgcccttttt tcttcggctc ggcgtatgtg aaggcgctcg
    12061 ccgggatcgc aacgttgtag cgctggttcg acagcttcac gacattctgc tttccctgcg
    12121 catcgattgc ggtccagccg tacaggcgaa gcccgcccgg cgagttgggc tcgcggatga
    12181 aagccaggac cagcctgcca tattcccggt gcgcgggatt gaccgcgttg acgacaacga
    12241 cccgcggatc cttgttgggg acgatctttg cgatccggtc caggttcgga ttgtccgcaa
    12301 gcagtattcc gagcggggtc ttgttgaggt cccagctcga tttctgtccg acgtcatagt
    12361 caaggaaagt gagcgtcttg ccgttggcga ccagcagcac gtcgaccccg ccgccatatt
    12421 caaagcggat ccggcccggc cgctttagct gaagcgtgcc cgacatggtg cggcgcttgg
    12481 agtcggtctg ggtgaagctc gcggtcatcg aatcgaccga gcgcaggtgc gccttgacga
    12541 ggttcaggtc ggaagcgctg gacgcgttca ctgcggccgg cgcgaccagg atcgcggccg
    12601 ggacgagtgc gcgcgcgaag gaggttgcaa aggacattcg aagctcctga aggatcattt
    12661 gcgccggaat ctggcggttt gcgattgaat gcgctctgaa ccttacggtt ccgccacgtt
    12721 caggcgtatt cgccgcctaa agggggtggc cgtcgaggtc gatcaacact tcgcggcggc
    12781 ccacatggtc gggcattcct accttcccgt ccttctccat tcgctcgatc agccgcgccg
    12841 cgctgttgta gccgactcgc agctgtcgct gcaggtagga tacggacgcc ttctggcttt
    12901 cggcgactat ctgcaccgcc ttgcgataga gctgggtctc gggatcgtcc tcgccggtcg
    12961 gctggccgtc gaacagatag tcgccgtcgt caggttcctc ggtgacggcc tggatatatt
    13021 cgggcgtgcc ttgccggcgc caatgctcgg cgacggcgcg cacttcctcg tcggagacga
    13081 agggcccgtg gacccgcagg atctgcttgc ctccgggcat gtagagcatg tcgcccttgc
    13141 cgagcagttg ctccgctccc tgttcgccaa ggatggtccg gctgtcgatc ttgctcgtga
    13201 cctggaagga gattcgggtc ggaaggttgg ccttgataac cccggtgatc acgtcgacgg
    13261 acggccgctg ggtggccatg atcaggtgga tccccgcagc gcgcgccttc tgcgcaagcc
    13321 gctggatcag gaattcgacc tccttgcccg ccgtcatcat caaatcggca agctcgtcga
    13381 ccacgaccac gatctgggga agcacgtcgt aatccagctg ctccatttcg tagatcggct
    13441 ggccggtctc ggcattgtag cctgtctgaa cgcgccgccc gagctgcgcg cccttggcct
    13501 tggcgtcgcg aaccttctgg ttgaagctcg gaagcgctcg gaccccgagg ttggccatca
    13561 tccgatagcg ctcttccatc tgctcgacgg tccatttgag cgcccggatc gccttgccgg
    13621 gctcggtcac caccggcgca agcaggtggg gaatgccctc gtagatgctg agctccagca
    13681 tcttcgggtc gatgaggatc atccggcact cgtcgggatc gagccggtag agaagcgaca
    13741 ggatcatgca gttgaggccg accgacttgc ccgagccggt ggtccccgcg accaaaaggt
    13801 gcggcatcgg agcgaggtcg gcgacgatcg ggtcgcccgc gatgttcttg ccgaggatca
    13861 gcggcagccc gacgccgtcg tcggcaaagg cgtcgctcgc gatcagctgc gacagggtca
    13921 cgctttcacg ccgggcattg ggaagctcga tcccgatcac gctgcgtccc gggacgattg
    13981 caacccgcgc cgaaatcgcc tgcatgttgc gggcgatgtc gtcagcgagc tggatgaccc
    14041 ggctggcctt gatcccgctg gccggctcaa gctcgtacat ggtgacgacg ggccccggct
    14101 tcacctccac gatattgccg cggacgtgga agtcctcgag caccgattcg aggattcgcg
    14161 cgttgcgctc gagcgctgcg cgatcgatct gagtccggcc cttttccggg ggcggcgcga
    14221 gcaggccgat gtcgggaagc gtataggaat cgccgagcgc cagcccgggt tgggccgccg
    14281 gccgtcgcga cggcggcgac ttcgaccgcg atggcgctgc tgccggttcg gagacggaaa
    14341 cggctgggcg cggcttgggc ggcgccgcaa tggatccccg ctcgtcccgc ggctcctggg
    14401 tcttgcgcgg cgcccgcttc cgctccggcg accgtgaaaa gattccgtgg agccaggccc
    14461 tctcgtcttc ggtcagtgcg accgccagcc aggcgaggac cagtccggca gccgcgaaaa
    14521 gcacgagcac cccaagccgg gtgggctgaa cgaaccgcgg atcggggatc aaggcaacca
    14581 ggccatcgat gccgtttgca gccgccaggg cgatggctcc gccccatcca gcgggaaggc
    14641 ccgagacggc cgagccgctg gtcaggctta gggcaatgcc gatcaggatt gctgcagctg
    14701 acgccagcag cattccacgg cggacgcgcc cggccggctc gaggcgaagc atgcgcaggc
    14761 cggcgagggc gatcaccggc agcagcagga ccgccccgat cccgaacagc aggaaggcga
    14821 ggtcgcttcc ataagcgccg acacggccga gccagttgcc cgccgctccg cccgccgcag
    14881 tggtgaacga cgcgtcggtg ctgctgtgcg aagcgagggc aagcgctccg gcaacggcca
    14941 gggcgaccag cgccgccccc cagcttcgcc gtgcgagcct ccgcatcgac tcgcgcagct
    15001 tgtcgcgcca gtccggtccc atgtccttgc ttggccgagc ggccgccgtc gccatttgtc
    15061 ccaccccaaa atccgctgct tagaatgcct tgtccgggac tcgcgggcaa gcgcgctgtc
    15121 ttgacgccag cattccggcc actcgccacc gggtgagtga ggcgctagtg caacgccaat
    15181 ggaccgtgcg gacgtgatca tcctgggcgg cggactcgtc ggcctggcgc tcgcggcggc
    15241 gctggactcg agcggccttt cggcggtcgt gatcgatccc gccgatcccg accagcggct
    15301 cgatgccgcc ttcgacggcc ggaccagtgc cgtctcctcg agctcgatgc gaatgctcga
    15361 ggccacgggc gttgccgact gttttccggc gcccggctgc ccgatcctga agatccaggt
    15421 tgccgacggc ctcgatcccg gcgggctggc gttcgagccc ggagaatacg acggcccgct
    15481 tggctggatg cacgaaaacc gaaatttgcg ggcggccctc cgtgcccgcg ccgaagccgg
    15541 aaagaagctc tggctgctgt ggaagtcgcg aattgccgcg atcgatcgcg gccaacattc
    15601 ggtggttgcc gcactcgagg atgggcgaaa ggtgatggcg ccgctggtcg ttgccgccga
    15661 cgggcgcaat tcgccgatgc gcgagcaggc ggggctgcgg atggcgcgct ggcgctacga
    15721 ccatgtcgct atcgtttcgg tgcttcatca caagcgcccg cacgaccatg tcgcttatga
    15781 aattttctat ccgggcggac cgttcgcgct cttgccgatg accgacgacg gcaggcgcca
    15841 ccgctcggcc atcgtctggt cggtgcaaaa ggacgatgga ccgggcttcc tgtcgctcag
    15901 cgacgaggat ttcgcggccg aggcggaaaa ggcgatgggc ggatttctcg gcaaggttgc
    15961 gctcgcagcg ccgcgctcta cttacccgtt gggcttccac cacgcttcga acatcaccgc
    16021 ccagcggctg gcgctggtcg gcgacgccgc ccacgccatc cacccgatcg ccggccaggg
    16081 cctcaatctc ggcttccgcg acgctgccgc gctcgcccag gtcctcgtcg agggagcgag
    16141 actcggactc gatctcggcg acaagcagct gctcgaccgc taccagcgct ggcgctcgct
    16201 cgactcgctg atggtgggaa tcgcgaccga cagcctgacc cgaatctacg gagtccccgg
    16261 ccggagcgcg tcggcggtcc gccggttcgg aatgggcctc atcgaccgaa tcgcgccgat
    16321 caaggacagg ctgatgaacg aggcgcgcgg caccagcggc gaccttcctc tgcttcttcg
    16381 cgggctaccg atttagttca ctgaagcgtc ggctggaggt cggttccgcc ctggctgagg
    16441 cggaggaact gcatcagctg caccagcagg tcggcgcgat cggcgagcgc gttcgattcc
    16501 agaagcgcct gctttgcgga aacgtcaaac ggcgcgacct gggcgatcgc attgaccagc
    16561 atctcgtcgt cgagtcggct gaccgccgac cagtccaccg ctagcccaag cgaatcgccg
    16621 aggcgccgag cctcgcgctc gacttcggcg cgctgcgcga ttcccagcgg ctccggctcg
    16681 cgatcgtcga aggcgccgac atcgaggtcg gcgttgcggt acggcgtatg caggtcgact
    16741 tcggtgacga tccggaagcg gttcgtgccg ttgaggacaa tattggagcg gccgtcctcg
    16801 agctcctcga gcccgacgat ctcgccgacg cagccgaccg gatagagcgg ctgcttgctg
    16861 tcgtcctcga cctcgaccag ctgcggctgc accaccgcga tcagcccgtc gccgtcgact
    16921 gcgtcgcgga ccatctcgcg gtagcgcggc tcgaagatgt ggagcggaag ctgcgccctc
    16981 gggaacagga tcgcgccggg aatcgggaac agcggcgccc gcagcggaag cgccccgctc
    17041 acgtgaacag cagtgcggag agacgccgcc gctgcgcgcg cgcccattcg tcctcgagcc
    17101 cttgcgcctc gagcaattgc agaaaccgct ttcgggcaac gccctcgttc cactctttgt
    17161 cgcgctcgat tatcgccagc agttcgtcgg cggcgcggtc gcggtcgccc gccgccatgc
    17221 tcgccccggc aaggtcgtat cgcgcctgga ggtcgtcggg attggcggcg accttctgct
    17281 cgagctcgga ggcgtccgac gcggctccgg cagacgcggt ctcgagcgcc gcccgcgccc
    17341 ggccgatcgc ggaatcgctc gccagctcgg cgggcaatcc gtcgagcagt gcctttgctt
    17401 cgtcggtctc gccattggcg atcagggcgc ggaccagccc gccggcagcg gcggcatcgt
    17461 cgggggccat gtcccggacc tggcggaaaa tgttgaccgc gcgctccgca tcgccgccgg
    17521 cgagcacttc gtcgcccatt gcgatcagcg ggccgatctc ggcctttgca ggctccggtt
    17581 cgtccccgac tccaagctgc gcgatcagct ggtcgagaat ccgcgtcagc tggccttcgg
    17641 tacggtagtt ggtgaggtcg gcgaccggct ggccctggta aaaggcatag acggtcggga
    17701 tcgactggac cctgaactgg gcggcgatga ccttgtccgc ctcgacgtcg atcttgacca
    17761 gcttgacgcc cttggcggca tagtcggtcg cgatcttctc taggaccggg gagagctgct
    17821 tgcaggggcc gcaccagtcg gcccagaagt cgagcaggac gagatggctc atcgacggct
    17881 ggatgacgtc gcgctccagc ttggccactg cctcgcgttc cgcctcgctc aatcccaaag
    17941 tcgccacgcc ggccctttcg ctactcgtgt gcggccccca tatggcgttc ggcggcgcgg
    18001 ctcacaaggc gagccgcgaa cgcttgcagc gggggctttt agcatgctag gcgcccgcca
    18061 ccctgccgcc gggccaagta gccgcggcgg tcgatgcgca gacgagcggg cgtagctcag
    18121 gggtagagca caaccttgcc aaggttgggg tcgagggttc gaatcccttc gcccgctcca
    18181 gcgcggtctg aggaccgcgc tttttcgttc atcccagcgg ccgctcgcga aaccatttcg
    18241 tgacgatgta cttcacgcca cgccgaacct tcagcccctg atggatcgtc gcttcgttgg
    18301 gtcggccgtc ggcaagctga ttgttccacg caagcagctt tccggtctcg ggctggacgg
    18361 tctttccgat taccttgaag cgggtgccgc cgccgtactc cggagcgttg agatagacca
    18421 tcgcggtcca cgtccgctgc ccggagtcgg cagtgtggac gtaatagtcg taaccgccgg
    18481 gattgaaggt gtcggtgtgc gcccggaact cctgcccttg cgcgtatcgc tgcccctgga
    18541 tgagctcacc cttggccggc gcgaggccga aaaggtcgca tatcttccgg tccacgtccg
    18601 cgacaagcgg atccgacggg tcgaggtcgc aggtttcgct agttcgaaaa ttctcgattc
    18661 cggcgtcgtc ggcgatcgtc gacgggcgcc ggcgcgagtc gatccgttcg atgagcgcgg
    18721 cgcaggcgcc ggggtcgaga aagccgcgaa ggatgaatag gtcgagcttc gggctcggga
    18781 cccgctgtat tccaggtgta atggccagcc gcctggcggg gcagtcctcg tcagagcgcg
    18841 taatcggtcc ctttcgccat ctcgtgctgc ctgatgaccg ccttcacgac attgttcatc
    18901 agggccatgc gcactggcag cggggtcgag gtcttcttga tcatcacggc aaccgtatag
    18961 cttttgccgt ccggcgaggt gaggattccg atgtcgttgt agccggcctg cactccggcg
    19021 agctcctggc ccgtgccggt cttgtggctg agcgtccatc ccggctgcag cccgcccttg
    19081 agcctgttcg gcccggtgcg ggtgttgccc atgatgttga gcagccgcgc ggtcgaggcg
    19141 ggcgacagaa gctcgccctt cttgagccgg gcaagggcgc tgacgatcgc gctcgccgag
    19201 gcgccgtcgt aggggtcgtc gacatagcgg ttgaaggccg cgcggcggac cgccatcgga
    19261 agcgcattgc gcgcttcgaa gaagccgccg ccgatcgaat agctctggga ccagatcagg
    19321 ccggcgatct tgctctgcag cgcgcgttcg ccatcgtaga agcggattgc cccgagcctc
    19381 ttggcggcaa tcatccttcg caccgcatcg gccccgccga cggaccgcat cagcttgtcg
    19441 ttggccgtgt tgtcgctggt ggtgatcgcc ttttccatca ggtcttcgag gctggtggtg
    19501 tagccgccgc tgaggatctt ggccctgatc ggctggtgga acagggtaag gtccgatcgc
    19561 gtcagggtga ccctgtcgtc gagcctgacc ttgcccttgt cgacggcgtc gagggccgtg
    19621 atcgcgaccc acagcttcga tacgctctgc tgcgggtaca gctcatcgtc tttccagccg
    19681 gtttcccacc cctcgtcgac ggagcggacc gcgattccga cgcggccgtc gaatgccttt
    19741 ccgagcgcgt ccaggcgctc gctgaggtag gcgggcgccc gcggaggagt cggcgccgcc
    19801 ggccgaggcg cggcctgggc gactcgaact tcgggctttg cggcgtgttt cggctgctcg
    19861 ggcctctccg ccgtcttgat tgctgcggcg ccgacctggg tcagtccagc cagcgcgagc
    19921 gccaggccaa agcggctcca aagtgacgtc atgaactcaa ttctccccca gctgcgtgtt
    19981 gttttccagc actttatcgc aagtgttctg aacctgcgct gtgcggcgcc ggccagggaa
    20041 tcgcacagtc gaatcgctca tccaagccct taggggcgcg gagtcggcgg agcgcccacc
    20101 aatgccgccg actcgatctc gtcgagcgct cggtgaaccg cgacgtagcg ccgcgcatcc
    20161 cggatccagt cgccggctcg cggcgctccg ggcagccgca tcgtctcagc cagagccgaa
    20221 tccacctcgc cggccgtcaa atgcgcaagt gcgcggttga agcgcgcctt cggcttggtc
    20281 gagggacgat cggagcggcg gaccgtcacc agcgacgaga atccgcgctt gaaaccggtc
    20341 cacaggtcct cgttcggagg cggcccgact agctgctgct ccaggtcctg gaagtcggca
    20401 atcagggtcg tcagccgaac cggcgagcgg gacgcggtca cgattgtcgc cactgcctgc
    20461 gggtgatccg gaccgaagcg ctggaccagc agcggctcga gatagccaag ggcgaccccg
    20521 cgctcgattg cccgccgtgc cgcaaaagca atcagaagcg cgtcggcgcg tccctccgac
    20581 ccctgggctt tctcggtttc gctttcgacg cgctggatcc gggcctgcag cgcaccgatt
    20641 tgctcggcga tcg
//
LOCUS       DATAKH010000078         7780 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_4445,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000078 DATAKH010000000
VERSION     DATAKH010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7780
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4445"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="VHN55_03070"
     CDS             complement(<1..978)
                     /locus_tag="VHN55_03070"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010406322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEX2802952.1"
                     /translation="MRIAMIGTGYVGLVSGACFADFGHDVTCVDKDTSKIDGLHAGRM
                     PIWEPGLDALVKSNVERGRLQFTTDLKAGVKGADAVFIAVGTPARRGDGHADLTYVFA
                     AVRELAKALDGPAVVVTKSTVPVGTGDTIAQILAEEGAPKGTSVASNPEFLREGAAIA
                     DFKHPDRIVVGAEDETAREVLREIYRPLFLNKAPILFTGRRTAELTKYAANAFLAVKI
                     SFINEIADLCEAVGADVQEVARGIGLDNRIGPKFLHPGPGYGGSCFPKDTLALLQTAA
                     EAGVQQRIVSTVVDVNDQRKQSMAGRVADALGGSVKGKTIGVLGLAFKPN"
     gene            1130..2158
                     /locus_tag="VHN55_03075"
     CDS             1130..2158
                     /locus_tag="VHN55_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020486543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEX2802953.1"
                     /translation="MTPRRHRDLTHMTLRRSSPVRPWLQFSIRMAVLFSLLVLIIAFH
                     WVERNSLHDNLDGVVSFTDVLYFTMISATTTGYGDIVPVTDRARMFDALIVTPIRIIF
                     ILVLAGTAYTFVIKKTWNRWLMKRIQRRLSDHVILAGHGVSNGKALEELLAREVDPST
                     IVVIDSDPEALERASECGVAVLQGDASRDETLRAAHVERAKALLISAGRDDAAILIVL
                     TARKLSPDVNISVTIRVSDNEDIARQAGADTVINPVSFAGLLLASSLQGPYRAEYLAD
                     LATSEGKVMLRERSIENGEVGKPLSEIATGQPVRMVRNGIPYGRDDPATHHLEEGDWI
                     LEIVEADT"
     gene            2214..3551
                     /gene="rimO"
                     /locus_tag="VHN55_03080"
     CDS             2214..3551
                     /gene="rimO"
                     /locus_tag="VHN55_03080"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010408139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEX2802954.1"
                     /translation="MKTTTLPRSPRVGLVSLGCPKALVDSERIMTKLRSDGYDMSADY
                     AGADVVLVNTCGFLDSAKAESLEAIGEAIAENGRVVVTGCMGKDAEMIRERFPGVLAV
                     TGPQQYEEVVAAVHDAAPPTVSPFVDLVPESGLKLTPRHYSYLKISEGCNHRCAFCII
                     PHLRGDLQSRRPDAILREAEKLVAAGTRELLVISQDTSAYGLDLKHASWPCKGGEVRA
                     HMTDLVRELGQLGAWVRLHYVYPYPHVDSVIPLMAEGLLLPYLDIPFQHASPKILKAM
                     KRPANEAKVLQRLREWRSQVPDLAVRSSFVVGFPGETEEDFEYLLRWLEEAQLDRVGA
                     FKFEPVEGAPATSMADQVPGEVKQERFERVMELSARISAEKLRSKVGKTVEVLIDAAN
                     PETGGASGRTKADAPEIDGEVHLRDARGVEQGDIVAAHIEDSDDHDLYGVPVA"
     gene            3781..4575
                     /locus_tag="VHN55_03085"
     CDS             3781..4575
                     /locus_tag="VHN55_03085"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX2802955.1"
                     /translation="MKTYLLAAAAIAAISSPAAARDGSPYVALEGGAMFAQDTDVDLV
                     FDDGDLGDIFRIDYKTGIDLDLLAGYDFGMVRAEAELGWKRAGVDSVVVDGEEFDDLD
                     DDHVSVLSGMGNLLFDVGGSDRFSFYGGGGFGRARVKFGGESDSAWAWQIIAGARMAV
                     SDNVELGLKYRYFNTGRLHFDESADFDDFGARAKFRSHSILASLIFNFGGTAAPLPPP
                     PPPAPAPVDVAPATQTCPDGTVIMATEMCPLPPAPPPPPPPVPERG"
     gene            complement(4652..5578)
                     /locus_tag="VHN55_03090"
     CDS             complement(4652..5578)
                     /locus_tag="VHN55_03090"
                     /inference="COORDINATES: protein motif:HMM:NF013613.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leishmanolysin-related zinc
                     metalloendopeptidase"
                     /protein_id="HEX2802956.1"
                     /translation="MRNGLFDSNSINNGNSVFGQGRGPQLDLRPDIPFSTDKIVGIDL
                     THVIHTNDVAAAKGGNGGGPGGGGGPGGGGGGGGSSFSPYTSGSSDGSGYNITITFTG
                     TWTQELYDVFVGAADRLTALITGDLQDVSVRSRGQVTNVDDITISAELGQIDGLYGIL
                     GQAGPTSVRTSNSLPATAQMKFDIVDVQDMGVDVFSDVVLHEMAHSLGFGSIWDRVGL
                     VSNGQYIGAEANAEYHAMGGTGFIPVEQDGGSGTAGAHWDEETFGNELMTGYINEGNN
                     YFTEMSAAAFQDLGYQTTQDYAAWADTGYVLV"
     gene            complement(5739..6827)
                     /locus_tag="VHN55_03095"
     CDS             complement(5739..6827)
                     /locus_tag="VHN55_03095"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX2802957.1"
                     /translation="MKRYRPQLDSLRAFAAIAILFAHFWIGGSTLATPVGLLAVRLFF
                     VLSGFLLTSILLAERDEASRRGIARERLLRNFYARRILRIWPAYYLAIGAALLFGAAG
                     VAATFAWHALFGSNILYFLEGAWDPVLLSHLWTLSIEEQFYLVLPLVVLFVPRSLLRP
                     VLVGGIAAALLFRFIVAALFDGPHVFYSALPLAQLDALCGGALLAEILAGGRTVKWKP
                     LLAWSLPAALVLNLLPLPEIINYPLVPAAYVIAMIAAVAAAQQGVGGLAGAVLGNRAL
                     IAMGRISYGVYLYHVLVWGAANAVQRSLGYEPLHYGFVSFVIWSSLSIAVATASWFLV
                     ERPALSLRRRFQLDRPAPTLIPAAPTSA"
     gene            6974..7372
                     /locus_tag="VHN55_03100"
     CDS             6974..7372
                     /locus_tag="VHN55_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007013509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2802958.1"
                     /translation="MPARILIVEDEILIAIELENILEDLGHEPAGIVPDLQAAELYFD
                     EALDLALVDLNLRDGLTGPQIGARLGEKGVTVVFITANPALLGAGVAGAIGVITKPTD
                     EDTVKGAIDYALGVREGRPVSPPAALKLFG"
     gene            complement(7361..>7780)
                     /locus_tag="VHN55_03105"
     CDS             complement(7361..>7780)
                     /locus_tag="VHN55_03105"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX2802959.1"
                     /translation="PEKLHGVIREILAPYPALAKGRIRIAGDDAPVDDRGATPMALLV
                     HELATNASKYGALSVPEGQVEVTTKVDGEALELCWRESGGPEIACPPDSTGFGTMLSE
                     LSIVQQLGGRIDREWLRGGLVVRARVELSRLVRSSAE"
BASE COUNT         1415 a         2485 c         2518 g         1362 t
ORIGIN      
        1 gttcggcttg aacgcgagcc cgagaacgcc gatcgtcttt cctttcacgc ttccgccaag
       61 cgcgtcggcg acgcggcccg ccatgctctg cttgcgctgg tcgttgacgt cgacgacggt
      121 gctgacgatg cgctgttgga cgcccgcttc ggccgcggtc tgaagcaagg cgagcgtgtc
      181 cttgggaaag caacttccgc catagccggg gccgggatgc aggaatttgg ggccgatgcg
      241 gttgtcgagc ccaattccgc gggcaacttc ctggacatcg gcgccgaccg cctcgcacag
      301 gtcggcgatc tcgttgatga agctgatctt caccgcgagg aaggcattgg ccgcatattt
      361 ggtaagctcg gcggtccggc ggccggtgaa caggatcggc gccttattga ggaacagcgg
      421 ccggtatatc tcgcgaagga cctcgcgggc agtctcgtcc tcggctccga cgacaatccg
      481 gtccggatgc ttgaagtcgg cgatagccgc tccttcgcga aggaattcgg ggttggaagc
      541 gacgctggtg cccttcggcg cgccttcttc ggcgagaatt tgggcgatcg tgtcgccggt
      601 gccgaccggg acggtcgact tggtgacgac cactgcaggt ccgtcgaggg cctttgcaag
      661 ctcccgaacg gcggcgaaaa cataggtcag gtcggcgtgg ccgtcgcctc gccgcgccgg
      721 cgtcccgacg gcgatgaaca ccgcgtcggc gccttttacc cccgccttta ggtcggtcgt
      781 gaactggagc cggccgcgct cgacgttgct tttgaccagc gcgtcgagcc cgggttccca
      841 gatcggcatc cggcccgcat ggagtccgtc gatcttggac gtgtccttgt cgacgcaggt
      901 cacgtcgtgg ccaaaatcgg caaaacaggc gccggagacg agcccgacat agccggttcc
      961 gatcatcgcg atacgcattg aacactcctg attgggggca cggcgccttt aaccacgaca
     1021 tcagccgttg gccagcggca tccctccggt tacacaaaca tgtcatggcc cgtgaaaaat
     1081 ccctcagccg gatgccggat cgagtcctcc gcgcgcacgg gcgacgacct tgacgccgcg
     1141 tcgccaccgc gacctgacgc acatgaccct tcggcgctcg tcgccggtgc ggccgtggct
     1201 gcagttcagc attcgcatgg ccgtcctgtt cagcctgctg gtgctgatca ttgccttcca
     1261 ctgggtcgaa cgaaacagcc tccacgacaa tctcgacggc gtcgtcagtt tcacggacgt
     1321 gctctatttc acgatgatca gtgcgactac gaccggctat ggcgacatcg tgccggtcac
     1381 cgaccgcgcc cggatgttcg acgccctgat cgtcactccc atccggatca tcttcatcct
     1441 cgttctggcg ggcaccgcct acacgttcgt catcaagaaa acctggaaca ggtggctaat
     1501 gaaacgaatc cagcgccgac tcagcgacca tgtcatcctc gccggccatg gagtgagcaa
     1561 cggcaaggcc cttgaggagt tgctcgctcg ggaagtggac cccagcacta tcgtcgttat
     1621 cgactccgac ccggaagcac tggaacgggc gagcgagtgt ggtgtggctg tcctccaggg
     1681 cgatgccagc cgcgacgaaa cgcttcgggc tgcgcatgtc gagcgggcga aggcgctgct
     1741 gatttccgcc ggccgcgacg atgcggcaat tctgatcgtg ctgaccgcgc gcaagctttc
     1801 ccccgacgtc aacatcagcg tcaccatccg cgtgtcggac aatgaggata ttgccaggca
     1861 ggccggtgcc gacacggtta tcaaccccgt cagctttgcc ggactgctgc tggccagctc
     1921 gcttcagggg ccgtaccgcg ccgaatatct cgccgacctc gccaccagcg agggcaaggt
     1981 catgctccgc gagcggtcga tcgagaatgg cgaggtcggc aagccgctat cggaaatcgc
     2041 caccggccag ccggtgcgga tggtccgcaa cggcatcccc tacggccgcg acgacccggc
     2101 gactcaccac ctcgaggaag gcgactggat cctggaaatc gtcgaagctg acacataaac
     2161 gcgcgtcagg cctcgatttt catcccaagc gtcactacat ggcgcgcctt ccaatgaaga
     2221 cgaccactct tcctcgatcg ccccgggttg ggctggtctc gctcggctgt cccaaggcct
     2281 tggtcgacag cgagcgaatc atgaccaagc tccgctccga cggctatgac atgtccgccg
     2341 actatgccgg cgccgacgtc gtgctcgtca acacctgcgg cttcctcgac agcgccaagg
     2401 ccgagagcct cgaagcgatc ggcgaggcta tcgccgagaa cggccgggtg gtcgtcacgg
     2461 gatgcatggg caaggacgcg gagatgatcc gcgaacgctt cccgggcgtt ctcgcagtca
     2521 ccggcccgca gcaatatgaa gaagtggtcg cggcggttca cgatgccgcg ccgccgacag
     2581 tttctccgtt cgtcgacctg gtcccggagt cggggctgaa gctgactccg cgccattaca
     2641 gctatttgaa gatttccgag ggttgcaacc accgctgcgc cttctgcatc atcccccacc
     2701 ttcgcggcga tctccagagc cggcgccccg acgccatcct gcgcgaggcg gaaaagctgg
     2761 tcgccgcggg gaccagggag ctgctggtta tcagccagga cacctccgcc tacgggctcg
     2821 acctcaagca cgcgtcgtgg ccgtgcaagg gcggcgaggt acgcgcccac atgaccgacc
     2881 tggtgcggga gctggggcag ctcggcgcct gggttcggct ccactacgtc tatccctatc
     2941 cgcacgtcga cagtgtcatc ccgctgatgg cggaggggct cttgctcccc tatctcgaca
     3001 tccccttcca gcacgccagc ccgaagatcc tgaaggcgat gaagcggccg gccaacgagg
     3061 ccaaggtgct ccagcggctg cgcgagtggc gcagccaggt tcccgacctt gcggttcggt
     3121 cctcgttcgt cgtcggcttt cccggcgaga ccgaggagga cttcgaatat ttgttgcgct
     3181 ggctcgagga ggcacagctg gatcgcgtcg gcgcgtttaa gtttgagcct gtcgaaggcg
     3241 ccccggcaac gtcgatggcc gaccaggtcc ccggcgaagt gaagcaggag cggttcgaac
     3301 gggtgatgga attgtcggcg cggatctcgg ccgaaaagct tcgctcaaag gtcggcaaga
     3361 ctgtcgaggt gctgatcgac gcggccaacc cggaaaccgg cggcgcaagc ggccgcacca
     3421 aggccgatgc gccggagatc gacggcgaag tccatctccg cgatgcgcgc ggagtcgagc
     3481 agggtgacat cgttgccgcg cacatcgagg attccgacga ccacgatctc tacggagtcc
     3541 cagtcgcctg atctttctag accggcacgc gccgagtcac ttcattgatg cgaaaaggcc
     3601 gcagtagtcg ttgaatctcc gccacgacta actttcgtca atatcgtgca attcctgcgc
     3661 cctttatttc aatcttcgtg aaagcagcgg gtcacccgtc cgggtgagct aagtaagcgg
     3721 cttcgccgtg cagaacttga tctcgagttg ctttcgttga tgagtgagag gagaaaacag
     3781 gtgaagacat acttgctcgc tgccgcggca attgcggcaa tttcatcgcc agccgcggct
     3841 cgcgacggtt cgccttacgt agctctcgaa ggcggcgcga tgtttgcgca ggataccgac
     3901 gtcgatctcg tcttcgacga tggcgatctc ggcgatatct tcaggatcga ttacaagacc
     3961 ggcatcgatc tcgacctgct cgccggctat gacttcggga tggttcgcgc cgaagccgag
     4021 ctcggctgga agcgcgcggg ggtcgactcg gtggtcgtcg acggtgagga gttcgacgat
     4081 ctcgacgacg accacgtttc ggtcctctcg ggtatgggaa acctgctgtt cgacgtcggc
     4141 ggcagcgacc gtttctcctt ctacggcggc ggcggcttcg gccgtgcccg agtgaagttc
     4201 ggcggcgaga gcgacagcgc ctgggcatgg cagatcatcg ccggtgctcg gatggctgtt
     4261 tccgataacg tcgagctcgg cctgaaatac cgctatttca acactggccg actccacttc
     4321 gacgagagtg ccgactttga cgatttcggt gcccgggcga agtttcgttc gcacagcatc
     4381 cttgccagcc tgatcttcaa cttcggagga actgcagcgc ccttgccgcc gccgcctccg
     4441 cccgcgccgg cgccggtcga cgttgctccg gcgacgcaaa cctgccctga cggaacggtg
     4501 atcatggcga ctgaaatgtg cccgcttccg ccggctccgc ccccgccgcc gcctccggtt
     4561 ccagagcgcg gctagcgact gctgttaaaa caaaaaccgg cccggggcgt gcccccgggc
     4621 cggtcttctt ttgtcagtcg tgccgggtcg atcagacgag gacgtagccg gtgtctgccc
     4681 aggcggcgta gtcctgcgtc gtctggtagc cgagatcctg gaaagcggcc gcgctcatct
     4741 cggtgaagta attgttcccc tcgttgatgt agccggtcat cagctcgttg ccgaaggtct
     4801 cttcgtccca gtgcgcgccg gcggtgcctg agccaccatc ctgctcgacc ggaatgaagc
     4861 ccgtcccgcc catggcgtga tattcagcgt tcgcctcggc gccgatgtac tggccgttgc
     4921 tgacgaggcc gacccggtcc cagatcgagc cgaagccgag gctgtgcgcc atttcgtgga
     4981 ggacgacgtc cgagaagacg tcgacaccca tgtcctgcac gtcgacgatg tcgaacttca
     5041 tctgggcggt ggcaggaagc gaattgctgg tccggaccga ggtcggcccg gcctgcccga
     5101 ggatcccgta aaggccatcg atctggccga gctcggcgct gatggtgatg tcgtccacgt
     5161 tcgtcacctg gccgcggctg cgaacgctga cgtcctggag gtcgccggtg atcagcgcgg
     5221 tcagccgatc ggccgcaccg acaaagacat cgtaaagctc ctgggtccag gttccggtaa
     5281 aggtgatggt gatgttgtag ccggagccgt cggacgagcc gctggtgtag ggcgaaaagc
     5341 tgcttccgcc gccgccgccg ccaccgcccg ggccgccgcc gccgcccgga ccgccgccat
     5401 tgccgccctt ggccgcggcg acgtcgttgg tgtggatgac atgggtaagg tcgatgccga
     5461 cgatcttgtc ggtcgagaag ggaatgtccg gccgaaggtc gagttgcggc ccacggccct
     5521 ggccgaagac cgagttgccg ttgttgatgg agttggaatc aaacagcccg ttacgcatga
     5581 acacgttccc ctttgagaag gcaaccgatc agattgccgg ttgcgattgc ggtaccgagg
     5641 cggtcgaact taacgaaagt cagggtcagc acaacccctt gtccgattga cctattttgg
     5701 cacgtagcga acgccggcag gaacgccgcc tgcaggacct aggccgacgt cggggcggcc
     5761 gggataaggg ttggggcggg gcgatcgagc tggaatcggc ggcggagcga cagggcggga
     5821 cgctcgacca ggaaccagga agcagtcgcg acggcgatcg acagcgacga ccagatcacg
     5881 aagctgacga agccgtagtg aagcggctcg tagccgagcg atcgctggac cgcgttggcc
     5941 gctccccaga cgaggacatg gtagagatag acgccgtagc tgatccgtcc catcgcgatc
     6001 agcgccctgt tgccaagcac cgccccggcg agccccccga ccccctgctg cgcagcggcg
     6061 accgcggcga tcatcgcgat cacataggcc gcggggacga gcgggtagtt gatgatttcg
     6121 ggcagcggca gcaggttgag gacgagcgcg gccgggagcg accaggcgag aagcggcttc
     6181 cacttcacgg ttcgaccgcc ggcgaggatc tcggcaagca gcgcgccgcc gcacaaagcg
     6241 tccagctggg cgaggggcaa agcgctgtaa aaaacatgcg gcccatcgaa cagcgccgcg
     6301 acgataaagc ggaacagaag ggcggccgcg atcccgccga ccaggaccgg ccgcaaaagc
     6361 gaccggggta cgaacagcac gacgagaggc agtacgaggt agaattgctc ttcgatcgac
     6421 agggtccaca ggtggctgag caggacgggg tcccaggcgc cctcgaggaa gtagaggatg
     6481 ttggagccga acaacgcgtg ccaggcgaag gtggcggcga ccccggcggc cccgaacaga
     6541 agcgcggcgc cgatcgccag ataataagcg ggccagatgc ggagaattcg gcgggcgtag
     6601 aaattgcgaa gcaaccgttc cctggcgatc ccgcggcggc tcgcctcgtc gcgctcggcc
     6661 agcaggatcg aggtgagaag gaagccgctg aggacgaaaa acaggcgaac cgccagcagc
     6721 cccaccggtg tggccagggt cgaaccgcca atccagaaat gggcgaagag gatggcgatc
     6781 gcggcaaagg cccgcagcga gtccagttgc gggcgatagc gcttcatcgc ttagtgctgc
     6841 caagacgctg cgcccaagtc catcctgcac cgccatcccg gcgccggtac gccggagcgc
     6901 aacatgttcc gccttgccgc gttaatgggg cgaaattata ttttagcgaa gctgctgaat
     6961 ctggttgtga cccatgcctg cgcgaatttt gatcgtcgag gatgagatcc tgatcgcaat
     7021 cgagctcgag aatatcctcg aggacctcgg ccacgagccc gcgggcatcg tccccgattt
     7081 gcaagccgcc gagctgtatt tcgacgaggc tctcgacctt gcgctggtcg acttgaacct
     7141 acgggacggc ctgaccgggc cgcagatcgg tgcgcggctg ggcgagaagg gcgtcacggt
     7201 cgttttcatt accgccaatc ccgcgctgct tggagcgggc gtcgcaggcg ccatcggggt
     7261 catcaccaag ccgaccgacg aagacacggt gaagggcgcg atcgactacg ccctcggcgt
     7321 tcgcgagggc cggccggtat cgccgcccgc ggcgctcaag ctattcggct gacgaacgga
     7381 ccagccgcga cagctccacc cttgccctga ccaccagccc gccgcgaagc cattcgcggt
     7441 cgattctgcc gccgagctgc tggacgatgc tgagctcgct gagcatggtg ccaaagcccg
     7501 tgctgtccgg agggcaggca atttccgggc cgccgctttc ccgccagcaa agctcgagcg
     7561 cctcgccgtc gaccttcgtc gttacttcca cctggccttc gggaacggac aaggcgccat
     7621 atttggacgc attggttgca agctcgtgga cgagaagcgc catcggagtc gccccgcggt
     7681 cgtcgaccgg ggcatcgtcg ccggcaatcc ggatccggcc cttggcgagc gcagggtagg
     7741 gagcgaggat ttcgcggatc acgccgtgaa gcttttccgg
//
LOCUS       DATAKH010000079        20075 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36804,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000079 DATAKH010000000
VERSION     DATAKH010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 20075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20075
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36804"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..146)
                     /locus_tag="VHN55_03110"
     CDS             complement(<1..146)
                     /locus_tag="VHN55_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HEX2802960.1"
                     /translation="MPLPPITDVLSEYEFLDPEDRYRLLIELGRKLEPMPDALKTDAT
                     KVRG"
     gene            complement(184..432)
                     /locus_tag="VHN55_03115"
     CDS             complement(184..432)
                     /locus_tag="VHN55_03115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802961.1"
                     /translation="MNGGQIMVVVIVAIVMFASIFKAKYGYGRNRGAIDASPEERAET
                     LRLRDEVKQLKERLKVLERITVEKENSLAKQIDELRDS"
     gene            complement(432..704)
                     /locus_tag="VHN55_03120"
     CDS             complement(432..704)
                     /locus_tag="VHN55_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011413643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802962.1"
                     /translation="MNPFEFVLAVLLLMFVFTIVRHKMGISGRSARDVQDVPNDAENE
                     RLRGNVKQLQERIKVLERIVTDRGVDTAAQIEALRERDRISEEDDS"
     gene            complement(701..988)
                     /locus_tag="VHN55_03125"
     CDS             complement(701..988)
                     /locus_tag="VHN55_03125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802963.1"
                     /translation="MIGPGEVMVALIVVGLPIILLMIIANRFFKLREKKLEVEAQLAA
                     EKAAQYASRSMELEQRVRVLEQIVTDAGAQTASQIEALRDRQKLPGREASK"
     gene            complement(1004..1393)
                     /gene="pspC"
                     /locus_tag="VHN55_03130"
     CDS             complement(1004..1393)
                     /gene="pspC"
                     /locus_tag="VHN55_03130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013933525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HEX2802964.1"
                     /translation="MSTQPPSRTNFYLDKKHGKVMGVCAGLADYTGFDVTLIRILFIL
                     ALFMGAGALLPVYFIAGWIAQDKPRELQDSNPEDKQFWQGVRTSPGRTARAIKARFRD
                     VDRRLAQVEHYVTVENRSLAREIEQLR"
     gene            complement(1390..1686)
                     /gene="pspB"
                     /locus_tag="VHN55_03135"
     CDS             complement(1390..1686)
                     /gene="pspB"
                     /locus_tag="VHN55_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017670903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009271 - phage shock [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HEX2802965.1"
                     /translation="MMDEFIPILAIVVLFLGLPWLIFHYVTRWKQAKTLTVGDEQLLD
                     ELHDLARRLDERMCTIERIMTAENPEWRQACLPEAGTPLSNDIGRTRVRTGEEG"
     gene            complement(1683..2354)
                     /gene="pspA"
                     /locus_tag="VHN55_03140"
     CDS             complement(1683..2354)
                     /gene="pspA"
                     /locus_tag="VHN55_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HEX2802966.1"
                     /translation="MSIFSRTRDIFAANMTELLDRAEDPARMIRMIILEMEETLVEVR
                     ASAAKTIADGKDMRRTLNRLDELQSSWTEKAELALSKGREDLAKAALIERQKATDMAD
                     GLKEEIRVLDDTLKSYEADIAKLQGKLREARARQNAIAHRLESAVTRAKARELLNGNR
                     TEDAFSRFEVLERRADFAEGRAEALGMTGPKSLEEEISELKSSDKVDAELEAMKAALA
                     AKGNK"
     gene            2519..3568
                     /gene="pspF"
                     /locus_tag="VHN55_03145"
     CDS             2519..3568
                     /gene="pspF"
                     /locus_tag="VHN55_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010413077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HEX2802967.1"
                     /translation="MERTETFVGQSNAVLDAVERASRAAALNRPVLVIGERGTGKELI
                     AERLHHLSPRWSGPLVVMNCAALPENLIEAELFGHEAGSFTGATKTRHGRFEEADGGT
                     LFLDELATLSAPAQDRLLRATEYGEITRIGASKPVSVDVRIVAATNEHLPTLVEQGKF
                     RADLLDRLSFEVITLPPLSARQGDIPLLIEHFGRRMAVELDWPNWPGFSDKAMAEMER
                     YSWPGNVRELRNVVERAVYRWEDAERPVDAIQFDPFHSPWTLKAAAALNARAETEPPS
                     AYEQSEEVPAAAPMPLETDDFRSAVDSYERTLLENALNANRFNQRATAAAIGLSYDQL
                     RHALKRHKLLDAGSR"
     gene            complement(3590..4168)
                     /locus_tag="VHN55_03150"
     CDS             complement(3590..4168)
                     /locus_tag="VHN55_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HEX2802968.1"
                     /translation="MDKFFANLWWVLAIGFGVAGVVMALPDYAIAPGVTSVGVAAGVF
                     QWLHVLFGVMWIGLLYYFNFVQVPLMPAIPAEAKPAVTKHIAPKALFYFRWSAALTVL
                     AGLVLAHLYHELMEVITFQEGFRLLSIGAYLGLIMAFNVWFIIWPAQKKVLGLVEADD
                     AAKAKAAKAALIASRTNVLLSIPMLLAMTNFR"
     gene            4306..4974
                     /locus_tag="VHN55_03155"
     CDS             4306..4974
                     /locus_tag="VHN55_03155"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008831334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEX2802969.1"
                     /translation="MAFKLPDLPFARDALEPHMSSETLDYHYGKHHKAYVDKTNGMLG
                     EKGLEGASLVEVIRAAKDKGDKGLFNNSAQIWNHSFFWQCLAPQGSSSPSGKLKEMID
                     DDFGGHDALLDALQTESANHFASGWGWLVLNNGKLEVTSLHDADTPVVHGMTPLLTID
                     VWEHAYYIDYRNERPRFLKSVLQNIINWDFVARNLDGKGASRADQESSSSDAAEVRES
                     ESAD"
     gene            complement(4979..5740)
                     /locus_tag="VHN55_03160"
     CDS             complement(4979..5740)
                     /locus_tag="VHN55_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014075764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2802970.1"
                     /translation="MNWRGVLAIYKFEMHRFRRTLWTGLAVPVITTSLYFIVFGAAIG
                     SRMTEIDGVAYGSFIVPGLMMLSLFTESIFNASFGIHMPRFTGTIYEILSAPLSAFET
                     VLGYVGAAASKAMSVALVIFITAHLFVPVTVAHPLLAFLYLLLVALTFCLFGFMVGIW
                     AKGFEQLQVIPLLVVTPLTFLGGAFYSIDMLGEPWRSITLFNPVVYLINGFRWTFFGT
                     ADVSFGLALGATLAFFLLCLAGVWWIFRTGYRLKQ"
     gene            complement(5737..6675)
                     /locus_tag="VHN55_03165"
     CDS             complement(5737..6675)
                     /locus_tag="VHN55_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2802971.1"
                     /translation="MSEPILSIRGLRKSYASGTEALKSVDLDIRRGEIFALLGPNGAG
                     KTTLISIVCGIVTPTGGEVLIDGKNWQQHYREARKRIGLVPQELTMDVFEPLISTVSF
                     SRELFGRAPDKAKVEQILRDLSLWDKRNEILKELSGGMKRRVMIAKALAHEPDILFLD
                     EPTAGVDVELRRDMWALVRRLRDNGTTIILTTHYIEEAEEMADRVGVIANGELILVEE
                     KTELMKKLGRKILHLQLTEPLKSVPPELAEWNPKLSEDGNILTYEFDAKADRTGIPSL
                     LTAIRDIGLGFKDLDTKQSSLEDIFVGLIHEKRSAA"
     gene            complement(6672..7286)
                     /locus_tag="VHN55_03170"
     CDS             complement(6672..7286)
                     /locus_tag="VHN55_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEX2802972.1"
                     /translation="MSAKEKPGSGSQLLIDVGPLLVFFAANFFAPVPSALKIFVATGA
                     FMAAMVAAMIYSALRFGRISPMLWFSGVLVVVMGGVTLWLHDEVFIKMKPTIYYVFIS
                     ALLGFGLFKGKPLLKMVLGSAYPGLDEEGWRKLTRNWAVFFLFLAALNEGVWRNSSTD
                     FWVGFKLWGAIPLTFLFAAANIPMLLRHGLNRDEAAPKEPGPVE"
     gene            complement(7283..8200)
                     /gene="ftsY"
                     /locus_tag="VHN55_03175"
     CDS             complement(7283..8200)
                     /gene="ftsY"
                     /locus_tag="VHN55_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011413749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEX2802973.1"
                     /translation="MSWLDRLRGGFSKTADKLADNLTGLTSRAALDTATLDDIEEALI
                     ASDIGPEASHRIRDSIARQKFDKLDERGLRTILAEEIEKILAPVAKPLEIYGFPRPHV
                     ILVIGVNGSGKTTTIGKLAHWLQEQDYGVLMCAGDTFRAAAIEQLQIWGTRIGAPVIA
                     GKEGADPAGLVFDGVKQATAQGIDVLVVDTAGRMQNKSHLMEELSKIRRVLGRLNAQA
                     PHDVLLVLDATTGQNALAQVEVFRETANVTGLIMTKLDGTARGGVLVAAAERFGLPIY
                     AIGVGETADDLRPFDPRAVARAIAGLPPE"
     gene            complement(8197..9357)
                     /locus_tag="VHN55_03180"
     CDS             complement(8197..9357)
                     /locus_tag="VHN55_03180"
                     /EC_number="2.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MiaB/RimO family radical SAM
                     methylthiotransferase"
                     /protein_id="HEX2802974.1"
                     /translation="MIAETVSLGCRLNFAEAETIARAAPKDERWVIVNSCAVTNDAVR
                     QTRQAIRRAHRRRPDARVLVTGCAAELDPSSFERMPEVSRVVGNADKLRAFGGMTSPV
                     AAGSHSRVRSFVAVQNGCDHRCTFCSIWQARGTSASLPFEAIRDAIAREIDRGAKEIV
                     LTGVDITDYTGGLGKLCQRLLAAEPRLKRLRLSSLDSIEIDEALFELIAGEPRLLPHF
                     HLSLQAGDDMILKRMKRRHSRAQAVAAVERIKAARADATIGADLIAGFPTESEEMAVN
                     SLQLLGDCDIIAAHVFPFSPRPGTPAARMPQLDRQVVKARAARLRKAADLRRSAWLDS
                     LAGTRQRVLIETNAKGHSDGFAPVAVAGARRGDIGTVRVTGRDGDSLVGVFE"
     gene            complement(9354..10166)
                     /gene="dapF"
                     /locus_tag="VHN55_03185"
     CDS             complement(9354..10166)
                     /gene="dapF"
                     /locus_tag="VHN55_03185"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX2802975.1"
                     /translation="MTLHFHKMHGLGNDFVIVDGRVNPVTITPELARGIADRHRGVGC
                     DQLILVGKSDKADVSMRIWNHDGGEVESCGNASRCVVALTGAKTIETPAGVIEGSSEG
                     SEVEVSVREPRFGWAEIPISYAMDTTDIPIDWGELRNGFAVNVGNPHIIFFVDDPDAI
                     NLDHRGPEIENDPAFPDRINVHVAAVRDDGIHMRSWERGAGLTLACGTGASATAVAAI
                     ASKRAASPVRVHMPGGSVTISWEPGQQLRMKGGATHVFEGDLDVENLARCAS"
     gene            10230..10667
                     /locus_tag="VHN55_03190"
     CDS             10230..10667
                     /locus_tag="VHN55_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802976.1"
                     /translation="MPRPANEVMQSIVFSAILDAVQALKKASGGLPNQLLRDVQAIHP
                     NVTFSDLPKELQDAIVESTRTAFTQLLKEGYAVGPREQMRQSRPMDRVPERDRRPSPR
                     PATGVRRGGRPPRDPNGRGPGGPPAPGGPTRPRRKPKGKPRLS"
     gene            10822..12276
                     /gene="ffh"
                     /locus_tag="VHN55_03195"
     CDS             10822..12276
                     /gene="ffh"
                     /locus_tag="VHN55_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX2802977.1"
                     /translation="MFDNLSDRLSGVFDKLRGRGALTDADVRSAMREVRVALLEADVA
                     LPVARDFVDRATEKAVGKEVLRSVTPGQMVVKIVHDQLVETLGSDASELRVDVNPPAV
                     VMMVGLQGSGKTTTTAKLAKRLTEKNRKKVLMASLDVARPAAQEQLAVLGRQASVDTL
                     PVVAGQQPVDIARRALQAAKLQGYDVVLLDTAGRLHVDEQLMAEMKAVSQAANPTETL
                     LVVDSLTGQDAVNVAKGFSAEVDLSGVILTRLDGDARGGAALSMRAVTGKPIKFAGVG
                     EGLDALEAFHPERIAGRILGMGDVVSLVEKAAETIKMDEAEKLAAKMAKGKFDLDDLR
                     SQIEQMQRMGGLGALANMLPGVKGMKGAMEKAQDGKALVHLEAMMSSMTAKERAKPDI
                     INAKRKIRIAKGSGTTVQEVNKLLKMHQEMSTAMKRLKKMGGFGKLAAMFGKGGMEEA
                     IGGLAPGALPPGGLPGLGGGAFNLPPGFDKFSKK"
     gene            12305..12790
                     /gene="rpsP"
                     /locus_tag="VHN55_03200"
                     /pseudo
     CDS             12305..12790
                     /gene="rpsP"
                     /locus_tag="VHN55_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048865.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
     gene            13090..13569
                     /gene="rimM"
                     /locus_tag="VHN55_03205"
     CDS             13090..13569
                     /gene="rimM"
                     /locus_tag="VHN55_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833019.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEX2802978.1"
                     /translation="MQRIALAAVAGAHGVKGELRLKLFTDSVDNLKRHDRVFVGDVER
                     KLESVRPAPAGAVARLGGVDDRSAAEALRGSLIEVDRSALPPLEDGEYYHADLIGLPC
                     VDGDGNEIGRVVAVENYGAGDLLEVQGPSGRSALIPFKPGIADQQGEKIVVDPEFLA"
     gene            complement(13566..14519)
                     /locus_tag="VHN55_03210"
     CDS             complement(13566..14519)
                     /locus_tag="VHN55_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013053853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX2802979.1"
                     /translation="MDEPLDCLIVGGGPAGLTAAIYLARFHLKILVVDDGNGRAASIP
                     CTHNLAGFPDGISGKEVLKRMREQAQLYGARIEDGFIARLERADGRFCATWGKGSVEA
                     KTVLLATGTRNRRPPMEEDLHDEALARGLIRYCPICDGYEVTDKTIGVIGGDSHGVAE
                     AVFIRGYTPDVTLIAPDKALDLAPDDQEKLKVARIDCIDGPARAVAISDGCIVVETAE
                     GTHTFDSVYPALGSDPHVLLADQAGAKLAGNGCVATDEHQRTSVPGLYAAGDIVIGLD
                     QISHAMGQAGVAATAIRNDLAARKPLLRESGREMDKAADGD"
     gene            14591..14902
                     /locus_tag="VHN55_03215"
     CDS             14591..14902
                     /locus_tag="VHN55_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802980.1"
                     /translation="MVWLLLLLVAAFGVLAGAAAEVALVRFRERWTPRRRVFTAAAAA
                     PSIIAAPLLVSLAAMLLYPSSAVGDLPFARIVTLGLSAGLAAFIGGIIVAFAIERTLH
                     P"
     gene            15014..15334
                     /locus_tag="VHN55_03220"
     CDS             15014..15334
                     /locus_tag="VHN55_03220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802981.1"
                     /translation="MNWTVLVIAFCLAVLAGAISATTLARMRPDWSNRRRLVVASAVL
                     PGVTLLASGVLAAIILLSDAGEGEDMRDLAAASVVTFGGAFALLALLGGLIGAGLRQR
                     GMKR"
     gene            15331..16071
                     /gene="trmD"
                     /locus_tag="VHN55_03225"
     CDS             15331..16071
                     /gene="trmD"
                     /locus_tag="VHN55_03225"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010186137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEX2802982.1"
                     /translation="MSFRASVLTLYPDMFPGPLGISLAGKALGEGAWSLDTIQIRDFA
                     TDKHRSVDDTPAGGGAGMVLRPDVVSAALDSVADGRPILALTPRGKPLTQAKVRELAA
                     SDGVILLCGRFEGFDERIFDARSIEEVSIGDYVLSGGEIGAMVILDACVRLLPGVMGA
                     ASSGEEESFEQGLLEYPHYTRPVTWEGRTIPEVLRSGDHAKIAAWRHERSLEDTRLRR
                     PDLIERHGGASQAPPSGARRRDTKADLK"
     gene            16068..16496
                     /gene="rplS"
                     /locus_tag="VHN55_03230"
     CDS             16068..16496
                     /gene="rplS"
                     /locus_tag="VHN55_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003041987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEX2802983.1"
                     /translation="MNLIETLEREAIDALTADKTIPEFRPGDTLKVGVKVVEGDRARV
                     QNFEGVCIARSNKGVGSSFTVRKISFGEGVERVFPLYSPAIDSIEVVRRGAVRRAKLY
                     YLRGRTGKAARIAERRTIQRDIPAGEGAQAEAPGGGKTKA"
     gene            16602..18839
                     /locus_tag="VHN55_03235"
     CDS             16602..18839
                     /locus_tag="VHN55_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008830222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEX2802984.1"
                     /translation="MHTVALLTAGLLAAALPAGAGAALPVPPGAEQKPLTLERIFGSP
                     SLNGPAPRGVKLSPKGDLLSMLRNREADRERYDLWVMDTNSGQWRMLVDSEKVGTGAE
                     LSEAEKMQRERARIGSLKGIVNYQWAPDGNAILVPLDGDLYLASLDGTVTRLTSSKDS
                     ELNPDISPKGRYVSFVRDQKLWVGPIGGSAKAITPGGGDIHYGEAEFVAQEELGRLTG
                     YWWSPNDDRLAVEWFDESNVAVVTRTAIGAEETKTFEQRYPAAGTDNIVPHLILINPD
                     GSRKVEADLGKDTDIYLARVDWAKDGKTVFAQILNRNQDRLDMLAIDPATGKSRVLFS
                     ETAAQGHWINLADYKWLEDGSLVWSSERSGLAQLYRFNDGQWTQLTNMAGPVTSLDGV
                     NEERGLVYFESNAADPLSNQIYVTSLSGGTPRMISDPAFKNGASMDKKATRLIVSRTS
                     PTQPGQSYLADENGQRIAWIEQNALDAKHPYAPYLASHELARYGSIKGPSGDTLYWKM
                     ITPPNMAAGKRYPVFFEHYGGPHSQTVSKGFDGGLDQYLVDQGYIVFEIDNRGSANRG
                     VDFEKPIYRAMGSVEVEDQKAGADFLKTLPFVDPDRIATYGWSYGGYMTLKMLEANPG
                     TYAAGIAGAPVTKWEFYDTAYTERYMGDPRKVPDAYRKADAIDDAGKIRDPLLIIHGM
                     SDDNVVFTNSTALFSKLQEEAVPFEMMVYPGYTHRVGGPKISVHVWRTILDFMRRNGV
                     PPGPR"
     gene            complement(18836..19672)
                     /locus_tag="VHN55_03240"
     CDS             complement(18836..19672)
                     /locus_tag="VHN55_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HEX2802985.1"
                     /translation="MAARTMSGSTPKKPAGTGKRKIPVRKIDATDLNRSLADGWSDFM
                     EMRGDIIFLMILYPVIGIIAAVATLGGPLIPLFLPIAAGIGLLGPVAAVGFYEMARRR
                     EMGLHSNWPHFLDVRKRPSFDEIAAVSALLLAIFVLWLIAAGALYVALFGWNEPASVT
                     AFLGDVFTTGRGWAMILIGSIVGIVFATAVLALSVVSMPMLVDNDVSAADAVRTSIRA
                     TRENPGAMLRWGIIVAALLIAGSIPLFIGLAVVLPWLGYATWHLYTRLVDRSAIATRR
                     RS"
     gene            19878..>20075
                     /locus_tag="VHN55_03245"
     CDS             19878..>20075
                     /locus_tag="VHN55_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011445068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEX2802986.1"
                     /translation="MGYRVAVVGATGNVGQEILNILAERQFPLDEIAAVASSRSTGDV
                     IDFGDSGKELKVKNLEHFDFSG"
BASE COUNT         3615 a         6557 c         6502 g         3401 t
ORIGIN      
        1 cagccgcgca ccttcgtcgc gtcggtcttg agagcgtcgg gcatcggctc gagcttgcgg
       61 ccgagctcga tcagcagccg gtaacggtct tccggatcga ggaattcata ttcggaaagg
      121 acgtccgtga tcgggggcag gggcatgtgc ccgagctatg cctcgccggc ggcgcaggca
      181 aggtcagctg tcgcgaagct cgtcgatctg cttggcgagg ctgttttcct tttcgacggt
      241 tatccgctcg agtaccttca ggcgttcctt gagctgcttg acctcgtcac gcaggcgcag
      301 cgtttccgcg cgctcttccg gcgacgcgtc gatcgccccc ctattgcgtc catagccgta
      361 cttcgccttg aagatcgacg cgaacatcac gatcgcgacg atcacgacaa ccatgatctg
      421 cccgccgttc atcagctatc gtcctcttca gaaatacgat cgcgctcgcg aagcgcctcg
      481 atttgcgccg cggtatcgac gccgcgatcg gtgacgatac gttcgaggac tttgatccgc
      541 tcctgcagct gcttcacgtt gccccgcagg cgctcgtttt cggcgtcgtt ggggacatcc
      601 tgaacgtctc gcgccgagcg acccgatatg cccatcttgt gccggacgat cgtgaagacg
      661 aacataagga gcaggacggc gaggacgaac tcgaaaggat tcacttggag gcctctctgc
      721 cggggagctt ctgccggtcg cgaagagctt cgatctggct ggcggtctgt gcgccggcgt
      781 cggtcacgat ctgctcaagt actcgaaccc gctgctccag ttccatggag cgagacgcat
      841 attgggcggc tttctcggcg gcaagctgcg cttccacctc gagctttttt tcgcgcaatt
      901 tgaagaagcg gttggcgatg atcatcaaca ggatgattgg caggccgaca acgatcagcg
      961 cgaccatgac ttccccggga ccgatcatga gatactcctg ggcttagcgt agctgctcga
     1021 tctcgcgggc gagcgagcgg ttctcgacgg tcacataatg ctcgacctgg gcgagccgcc
     1081 ggtcgacatc gcggaatcgc gccttgatgg cgcgcgcggt ccggccgggc gaggtgcgca
     1141 caccctgcca gaattgcttg tcctccggat ttgaatcctg gagctcgcgc ggcttgtcct
     1201 gggcgatcca gccggcgatg aaatagaccg gcagcaaggc gccggcgccc atgaacagcg
     1261 ccaggatgaa caggatccgg ataagcgtga cgtcgaagcc ggtgtaatcg gcaaggccgg
     1321 cgcacacgcc catgaccttg ccatgcttct tgtcgaggta gaagttcgtc cggctggggg
     1381 gctgcgtgct catccttcct cccccgtgcg gacacgggtc cggccgatgt cgttggaaag
     1441 cggcgttccg gcctcgggga ggcaggcctg gcgccactct gggttctcgg cggtcatgat
     1501 tcgctcgatc gtgcacatgc gttcgtcgag ccggcgagcg aggtcgtgaa gctcgtcgag
     1561 cagctgctcg tcgccgacgg tcagcgtctt cgcctgcttc cagcgggtga cgtagtggaa
     1621 gatcagccac ggcagcccga ggaagagtac gacaatcgcc agaatcggaa tgaactcgtc
     1681 catcacttat tcccctttgc cgcgagcgcg gccttcatcg cttcgagctc cgcatcgacc
     1741 ttgtcggacg acttgagctc ggaaatttcc tcttccaggc tcttgggccc tgtcattccc
     1801 agcgcctccg cacggccttc ggcgaagtcc gcccgccgct caaggacctc aaagcggctg
     1861 aacgcatcct cggtacggtt gccgttgaga agctcgcgcg ccttggcccg ggtcaccgcg
     1921 ctttccagcc ggtgggcgat cgcgttctgg cgcgcccggg cttcgcgaag cttgccctgg
     1981 agcttggcga tgtccgcctc gtagctcttc agcgtgtcgt cgaggacgcg gatctcctcc
     2041 ttcaggccat cggccatgtc ggtcgccttc tgtcgctcga tgagcgcggc cttggcgagg
     2101 tcctcgcggc ctttgctgag cgccagctcg gccttctcgg tccagctcga ctgaagctcg
     2161 tccagccggt tcaacgtccg gcgcatgtcc ttgccgtcgg cgatcgtttt cgccgcgctt
     2221 gcccgaactt cgaccagcgt ctcttccatc tcgaggatga tcatccggat catccgcgcc
     2281 gggtcttcgg cccggtcgag aagctcggtc atgttcgcag cgaagatgtc ccgcgtccgg
     2341 gaaaagatac tcatcttagc actccgcaat caaaatcagg gccctgcatg cattttacca
     2401 tgcaggacat atgccaaact tcggaaatgc aacgaagctg cgaaaatcgc ggaaattgcc
     2461 cgttccgctc gtcgaaatat cttgccaaat catggcattt gccaccaaca gtcagcgcgt
     2521 ggaacgcacc gaaaccttcg tcggccaaag caacgccgtt ctcgacgccg tcgagagggc
     2581 gagccgtgct gcagcgctta accggccggt gctggtgatc ggcgagcgcg gaaccggcaa
     2641 ggagctgatc gcagaacgcc tccaccacct cagcccgcgc tggtcggggc cgctggtcgt
     2701 gatgaactgc gcggcattgc cggaaaacct catcgaggcg gagctgttcg gccatgaagc
     2761 cggctctttt accggagcga ccaagactcg tcacgggcgt ttcgaagaag cggacggcgg
     2821 cacccttttc ctcgatgagc tggcgaccct gtcggcaccc gcccaggacc ggctgctaag
     2881 agcgaccgaa tatggcgaga ttacccggat cggcgcgtcc aagccggtgt cggtcgacgt
     2941 ccgcatcgtc gccgcaacca acgagcatct cccgaccctg gtcgagcagg ggaagttccg
     3001 agcggacctt ctcgaccgcc tgtcgttcga agtgatcacc ctcccgccgc taagcgctcg
     3061 ccagggcgac atcccgctcc tgatcgagca tttcgggcgg cggatggcgg tcgagctcga
     3121 ctggcccaac tggccgggtt tctccgacaa ggcgatggct gagatggagc gctattcctg
     3181 gccgggcaac gtccgcgagc ttcgcaatgt cgtcgagcgg gccgtgtacc gctgggaaga
     3241 tgccgagcgg ccggtggacg cgattcagtt cgatcccttc cactcgccgt ggacattgaa
     3301 agcggccgcg gcactgaacg cccgcgcgga aaccgagccg ccgtccgcgt acgagcagtc
     3361 cgaggaagtt cccgccgccg cgccgatgcc gctcgagacc gacgatttcc ggagcgctgt
     3421 cgattcctac gagcgcacgc tcctggaaaa cgcgctcaac gccaatcgct tcaaccagcg
     3481 ggcgactgct gcggcgatcg ggctcagcta cgaccagctc cgccacgcgc tcaagcgcca
     3541 caagctgctc gacgccggct cgcgctaggc aagccggcgc cgtttcaaat cagcggaagt
     3601 tggtcatcgc cagaagcatc gggatcgaca gcagaacgtt cgtccgcgat gcgatcagcg
     3661 ccgccttggc tgctttcgcc ttggccgcgt cgtcggcctc cacgaggccc agcaccttct
     3721 tttgcgcggg ccaaatgatg aaccagacgt tgaaggccat gatcagcccc agataggcgc
     3781 cgatcgaaag cagccggaac ccttcctgga aagtgatcac ctccatcagc tcatgataga
     3841 ggtgcgccag gacaagaccg gcaagcacag tcagcgccgc gctccagcgg aaataaaaca
     3901 gcgcttttgg cgcgatatgc ttcgtcaccg ccggcttcgc ctcggccggg atcgccggca
     3961 tcagcggcac ctgcacgaag ttgaaatagt agagcaggcc gatccacatc accccgaaca
     4021 gcacgtggag ccactggaac acgccggcgg cgactccgac cgaggtcacg cccggcgcga
     4081 ttgcgtagtc gggcagcgcc atcaccactc cggcaacgcc gaagccgatc gccaacaccc
     4141 accagagatt tgcgaagaat ttgtccatct gatccccctt agtcagcacc ttttcagcgt
     4201 ttgttacggc ggcggcacag ccaatcgcaa gccctcgcga acttcggcgg agcctccgtg
     4261 gttctcgtcc gttccccttg catcacctta acgaggagac ccgccatggc tttcaagctg
     4321 cccgacctgc cgttcgcgcg cgacgcgctg gagccgcaca tgtcgagcga aacactcgat
     4381 taccactacg gcaagcacca caaggcctat gtcgacaaga ccaacggcat gcttggcgag
     4441 aagggcttgg aaggcgcgtc gctggtcgag gtgatccgcg ccgcgaagga caagggcgac
     4501 aagggcctgt tcaacaattc ggcgcagatc tggaaccaca gcttcttctg gcaatgcctt
     4561 gccccgcaag gctcgagctc gccgtcgggc aagctcaagg agatgatcga cgacgatttc
     4621 ggcggccacg acgctctgct cgacgcgctt cagaccgaaa gcgccaatca tttcgcaagc
     4681 ggctggggct ggctcgtcct caacaacggc aagctggaag tcacgtcgct ccacgacgcc
     4741 gacacgcccg tcgtccacgg aatgactccg ttgctgacca tcgatgtgtg ggagcatgct
     4801 tattacatcg attatcgcaa cgagcggccg cgcttcctga agagcgtcct ccagaacatc
     4861 atcaactggg actttgtcgc gcggaacctc gacggcaagg gcgccagccg agcggaccag
     4921 gagagctcgt ccagcgatgc cgcagaggtc cgcgagagcg aatccgccga ctgagcggct
     4981 attgcttcag ccggtagccg gtgcggaaga tccaccacac tccggccagg cagagcagga
     5041 agaaggccaa ggtcgcgccg agcgcgaggc cgaagctgac gtccgcggtc ccgaagaacg
     5101 tccagcggaa gccgttgatc aggtagacca ccgggttgaa cagggtgatc gaccgccacg
     5161 gctcgccgag catgtcgatc gaataaaagg cgccgccgag gaaggtgagc ggggtcacga
     5221 ccagcagcgg gatgacctgc agctgctcga accccttggc ccagatcccg accatgaagc
     5281 cgaacaggca gaaggtgagg gcgacgagga gcaggtagag gaacgccagc agcgggtgag
     5341 cgaccgtaac cggcacgaac aggtgcgcgg tgatgaagat caccagcgcg acgctcattg
     5401 ccttgcttgc agcagcgccg acatagccga gcaccgtttc gaacgcggat agcggcgccg
     5461 acaggatctc atagatggtg ccggtgaagc gcggcatgtg gattccgaag ctggcgttga
     5521 agatgctctc ggtgaacagc gacagcatca tcaggccggg gacgatgaag cttccgtagg
     5581 cgactccgtc gatctcggtc atccggcttc cgatcgcggc gccaaaaacg atgaaataga
     5641 gcgaggtggt gatcaccggt accgcaaggc cggtccacag ggtccgccgg aagcggtgca
     5701 tttcgaactt gtagatggca aggacgccgc gccagttcat gcggcgctcc gcttttcgtg
     5761 gatgaggccg acgaaaatat cctcgaggct cgactgcttg gtgtcgagat ccttgaatcc
     5821 gagtccgatg tcgcggatcg ccgtcaggag cgagggaatg ccggtgcgat cggctttcgc
     5881 gtcgaattca taggtgagga tgttgccatc ctcgctgagc ttcgggttcc actcggcaag
     5941 ctcgggcggg accgatttca gcggctcggt cagctgcagg tgaaggatct ttcgcccgag
     6001 cttcttcatc agctcggtct tctcttcgac caggatcagc tcgccgttgg cgatcacgcc
     6061 gacacggtcg gccatctcct cggcttcctc gatatagtgg gtggtgagga tgatcgtggt
     6121 gccattgtcg cggaggcgcc tgaccagcgc ccacatgtcg cggcgaagct cgacatcgac
     6181 gcctgctgtc ggttcgtcga ggaacaggat gtccggctcg tgggcgagcg ccttggcgat
     6241 catcacccgc cgcttcattc cgcccgacag ctctttgagg atttcgttgc gcttgtccca
     6301 cagcgaaagg tcgcggagga tctgctcgac cttcgccttg tccggcgctc gtccgaacaa
     6361 ctcccggctg aagctcacgg tgctgatcag cggctcgaac acgtccatcg tcagctcttg
     6421 cgggacgagc ccgatccgct tgcgcgcctc gcgatagtgc tgctgccagt tcttgccgtc
     6481 gatcagcact tcgccgccgg tcggagtgac aatgccgcag acgatgctga tcagcgtcgt
     6541 cttgccggcg ccgtttggcc cgagaagcgc gaaaatctcg ccgcggcgaa tgtcgaggtc
     6601 gacgctcttc agcgcctcgg tgccgctcgc gtagctcttg cggagcccgc ggatggacag
     6661 gatcggctcg ctcattcgac cggccccggt tccttcggtg cggcttcgtc gcggttgagg
     6721 ccgtggcgca gaagcatcgg gatgttggcc gctgcgaaca ggaaggtgag cgggatcgcc
     6781 ccccagagct tgaagccgac ccagaagtcc gtgctgctgt tgcgccacac gccttcgttg
     6841 agggcggcaa ggaacaggaa gaacacggcc cagttgcggg tcagctttcg ccacccttcc
     6901 tcgtcgagcc ccgggtaggc gcttcccagg accatcttca aaagcggctt gcccttgaac
     6961 aggccgaagc cgagcagggc cgagatgaag acgtagtaga tcgtcggctt catcttgatg
     7021 aagacctcgt cgtgcagcca cagggtcact ccgcccatga cgacgacgag gacgcccgag
     7081 aaccacagca tcggcgaaat ccggccgaat cggagggccg aatagatcat cgccgccacc
     7141 atcgcggcca tgaaggcgcc ggtggcgacg aagattttca gcgccgaggg cacgggcgcg
     7201 aagaaattgg cggcgaagaa gacgagcagg ggcccgacat cgatcagcag ctgcgagccg
     7261 ctgcccggct tttccttggc gctcattccg gcgggagccc tgcgatcgcg cgcgcgacgg
     7321 cgcgggggtc gaacgggcgc aggtcgtcgg cggtctctcc gaccccgatc gcatagatgg
     7381 gaaggccgaa gcgctcggcg gcggcgacga ggactccgcc gcgggcggtt ccgtcgagct
     7441 tggtcatgat caggccggtc acattggccg tttcgcggaa gacctcgacc tgcgccagcg
     7501 cattctggcc cgtcgttgcg tcgagaacga ggaggacgtc gtggggcgct tgcgcgttga
     7561 ggcggccgag gacccggcgg atcttcgaca attcctccat caggtgcgac ttgttctgca
     7621 tccggccggc ggtatcgacc acaaggacat cgatcccctg cgcggttgcc tgcttgaccc
     7681 catcgaacac caggccggca ggatcggcgc cttccttgcc ggcgatgact ggcgcgccga
     7741 tgcgggtccc ccagatctgg agctgctcga tggccgcggc tcggaaggtg tcgccggcgc
     7801 acatcaggac tccgtaatcc tgctcctgga gccaatgggc aagcttgccg atcgtggtgg
     7861 tcttacctga cccgttgacg ccgataacca ggatcacgtg cggccgcgga aagccgtaga
     7921 tttccagcgg cttggcgacg ggagccaaga tcttttctat ctcttcggcg aggatggttc
     7981 gaagcccgcg ctcgtcgagc ttgtcgaact tttgccgggc gattgagtcg cggatccgat
     8041 gggacgcctc gggcccgatg tcggaggcga tcagagcctc ctcgatatcg tcgagtgtcg
     8101 ccgtgtcgag cgcggcgcgg ctggtcaggc cagtgaggtt gtcggcgagc ttgtcggcgg
     8161 ttttggagaa accgccgcgc aggcggtcga gccagctcat tcgaaaacgc ccacgaggct
     8221 gtcgccgtcg cggcctgtga cccggacggt gccgatgtcc ccgcgcctgg cgccggcgac
     8281 cgcaaccggc gcaaagccgt cgctgtgccc cttggcgttg gtttcgatca gcacccgctg
     8341 gcgagttccg gcgaggctgt cgagccaggc actacgacga aggtcggcag ccttccgaag
     8401 cctggcggcg cgggccttca ccacctgccg gtccagttgc ggcatccgcg cagccggcgt
     8461 gccggggcgc ggcgagaagg gaaacacatg agcagcaatt atgtcgcaat cgcctagcag
     8521 ttgcagcgag ttcaccgcca tttcttcaga ttcggtagga aatccggcga tcaggtcggc
     8581 accgatcgtc gcatcggctc gcgcggcctt gatccgctcg acggcggcga ccgcctgggc
     8641 gcggctgtgg cggcgcttca tccgcttgag gatcatgtcg tccccggcct ggagcgacag
     8701 gtggaagtgt ggcagcagcc ggggctcgcc cgcgatcagc tcgaacaggg cttcgtcgat
     8761 ctcgatgctg tcgagcgacg acaggcgaag ccgcttcagc cgcggctcgg cggcgagcag
     8821 gcgctggcac aatttgccca ggccgcccgt gtagtcggtg atgtcgacgc cggtgagcac
     8881 gatctccttc gcgccgcgat cgatctcacg cgcgatggcg tcgcggatcg cttcgaacgg
     8941 aagcgaggcg cttgtccccc gcgcctgcca gatcgagcag aaggtgcagc ggtggtcgca
     9001 gccgttctgg acggcgacga agcttcgcac ccgggagtgc gaacccgcgg cgacgggcga
     9061 cgtcatgccg ccaaaagccc gtagcttgtc cgcgttgccg accacccgcg aaacctccgg
     9121 catccgctcg aagctcgagg gatcgagctc agcggcgcaa ccggtaacca ggactcgcgc
     9181 gtccgggcgc ctgcggtgcg cccgccggat cgcctggcga gtctgccgga cagcgtcgtt
     9241 ggtgactgcg cagctgttga cgatcaccca gcgctcgtcc ttcggagcgg cccttgcgat
     9301 cgtttccgcc tccgcgaagt tgagccggca gccgaggctc accgtctcgg caatcatgag
     9361 gcgcacctgg cgaggttctc gacgtcgaga tcgccctcga acacgtgggt ggcgccgccc
     9421 ttcatccgca gctgctggcc cggttcccat gaaatggtga ccgatccgcc cggcatgtga
     9481 accctgaccg ggctcgccgc gcgcttgctt gcgatggcgg caacggcagt cgccgacgct
     9541 ccggtaccgc aggcgagcgt caggccggct ccgcgctccc acgagcgcat gtggatgccg
     9601 tcgtcgcgga cggcggcgac atggacgttg atccggtcgg ggaacgccgg atcgttctcg
     9661 atctccgggc cgcggtggtc gagattgatc gcatccgggt cgtcgacgaa aaatatgata
     9721 tgcgggttgc cgacattgac cgcgaagccg ttcctcagct cgccccagtc gatcgggata
     9781 tcggtcgtgt ccatcgcgta ggagatcgga atctcggccc agccgaagcg cggctcgcgc
     9841 acgctaacct cgacttcgct gccctcggac gaaccctcga tcacgcccgc cggagtctcg
     9901 atggtcttcg cgccggtcag ggcgaccaca cagcgtgacg cgttgccgca ggattcgacc
     9961 tccccgccgt cgtggttcca gattcgcatc gacacgtcgg ccttgtccga cttgccgacc
    10021 aggatcagct ggtcgcagcc cactccgcgg tggcggtcgg ctatgccgcg cgccagctcc
    10081 ggggtgatcg tcactgggtt cacgcgtccg tcaacgatga cgaaatcgtt tcccaagccg
    10141 tgcatcttgt gaaagtggag tgtcatgcgc agggcgcgca tctagggggc cgcgaaactc
    10201 aagtccacca gccggggcac gaaacagcaa tgccgagacc agcgaacgaa gtgatgcagt
    10261 caatcgtctt ctcggcgatc ctcgacgccg tgcaggcgct gaagaaggcc tccggaggct
    10321 tgccgaacca gctgcttcgc gacgtccagg ctatccaccc caacgtcacc ttctccgacc
    10381 tgccgaagga gcttcaagac gcgatcgtcg agagtactcg cacagcgttt acgcagctgc
    10441 tgaaggaagg ctatgcggtc ggcccgcgcg agcagatgcg ccagtcgcgg ccaatggacc
    10501 gtgtccccga acgcgaccgc cgcccgtcac cgcgccccgc caccggagtc cgccgcggcg
    10561 gccggcctcc gcgagacccc aacggccgcg gccccggcgg cccgcccgca cccggcggcc
    10621 caacccgccc gcgccgcaag cccaagggca agccgcggtt gagttgattc gcgaggtcgc
    10681 ttcggctagg ggcgccccgt cttaggacat acatgactgg agcgcccgcg ggcgcacgcc
    10741 ggccgacgag gtttcgtccg ccggcgtaat ttgcgttgcg agcacccata tgggccgttc
    10801 cggcatgttc aggagacttg agtgttcgat aatctgagcg atcgcctatc gggcgtattc
    10861 gacaagcttc gcgggcgcgg cgccctgacc gacgccgacg tgcgctcggc gatgcgcgaa
    10921 gtccgagtcg cgcttctcga agccgacgtc gctctccccg ttgcccgcga tttcgtcgac
    10981 cgggccaccg agaaagccgt cggcaaggaa gtgctgcgct cggtcactcc ggggcagatg
    11041 gtcgtcaaga tcgtccacga ccaactcgtg gagaccctcg gatccgacgc ctccgagctt
    11101 cgcgtcgacg tcaatccacc ggccgtcgtg atgatggtcg ggctccaggg ctcgggcaag
    11161 accaccacca ccgcgaaact cgccaagcgg ctcaccgaga agaaccgcaa gaaggtgctg
    11221 atggcgtcgc tcgacgtcgc ccgcccggcg gcgcaggagc agcttgcggt gctcggccgg
    11281 caggccagcg ttgatactct cccggtcgta gccggacagc agccggtcga catcgccagg
    11341 cgcgcgctcc aggcggcgaa gcttcagggc tacgacgtgg tcctgctcga caccgccggc
    11401 cgtcttcacg tcgacgagca gctcatggcg gagatgaaag ccgtatccca ggcggcgaac
    11461 ccgaccgaga cattgctcgt cgtcgacagc ctcaccggcc aggacgcggt caacgtcgcc
    11521 aagggctttt cggccgaggt cgaccttagc ggcgtcatcc ttacccgcct cgacggcgac
    11581 gcccgcgggg gcgctgcgct gtcgatgcgc gcggtgaccg gcaagccgat caagttcgcc
    11641 ggcgtcggcg aggggctgga tgctctcgag gcgttccacc ctgagcggat cgccggtcgc
    11701 attctcggga tgggcgacgt cgtcagcctg gtcgagaagg ccgccgaaac catcaagatg
    11761 gacgaggcgg aaaagctcgc ggccaagatg gccaagggca agttcgacct cgacgacctg
    11821 cgctcgcaga tcgagcagat gcagcggatg ggcggcctcg gggcgctcgc caacatgctt
    11881 cccggcgtca agggcatgaa gggtgcgatg gaaaaggccc aggacggcaa ggcgctggtc
    11941 cacctcgaag cgatgatgag ctcgatgacc gcaaaggagc gggccaagcc ggacatcatc
    12001 aacgccaagc gcaagatccg gatcgccaag ggcagcggca ccaccgtcca ggaggtgaac
    12061 aagctcttga agatgcacca ggaaatgtcg accgcgatga agcggctcaa gaagatgggc
    12121 ggcttcggca agctcgcggc gatgttcggc aagggcggaa tggaagaggc aatcggcgga
    12181 ctggcgccgg gggccttgcc gcccggcggg cttcccggcc tcggcggcgg cgcattcaac
    12241 ctcccgcctg gtttcgacaa attttcaaaa aaatagacaa agacactgaa aggacaggat
    12301 taaaatggct ctagcaattc gcctctcccg tggcggcgca aagaagcggc cctattaccg
    12361 gatcgtcgtc gcagacagcc gcaaggcccg cgacggccgc ttcatcgaga agctcggcac
    12421 ctacaacccg ctgctggcaa aggattcgcc ggaccgggtg aagatggata ccgaccggat
    12481 caagcattgg ctgagcgtcg gcgcgcagcc gtcggaccgc gtgctccgct tcctcgatgc
    12541 cgccgggatc aaggagcgcc cggcccgcaa caatccgaag aaggcgcttc cgggcgaaaa
    12601 ggcgaaggag cgcgccgagg agcgtgagac caaggccgcc gaagcagccg aggccgctgc
    12661 cgcgccggct gaagagccag ccgccgaggc tccggctcaa gagccagccg ccgaggctcc
    12721 ggctgaggaa gctgccgccg agcagccggc cgccgaagag gccgccgctg aggaggcttc
    12781 cactgaagcc actgcggagg aagttccggc tgcggaagag gctgccgctg aagaggctcc
    12841 cgcccaggag gcaccggcag aagaggcttc cgccgaggag gcaccggcag aagagactcc
    12901 tgctgaggaa gctgctgctt ctgaagaggc ccctgcagag gaagctgctg cttctgaaga
    12961 ggcgacttcc gccgacgagg cgaccaatga gggtgagtcg accgacgagc ctgccgaagg
    13021 ctcggccgag gacacgcctg ccgaaggtgc cgaaaaggcc accgaagaga aggcggagta
    13081 accttcgctt tgcagcgcat cgcccttgcc gccgtcgccg gagcgcatgg cgtcaagggc
    13141 gagctgcgcc tgaagctgtt caccgacagc gtcgataacc tgaagcggca cgacagggtc
    13201 ttcgttggcg atgtggagcg gaagctcgaa agcgttcgtc ccgcccctgc cggggcagta
    13261 gcccggctcg gcggcgtcga cgaccggtct gcagccgaag ccttgcgagg atcgctaatt
    13321 gaggtcgacc gctcggcact ccctccgctc gaggatggcg aatattatca cgccgacctg
    13381 atcggactgc cgtgcgtcga tggagacgga aacgagatcg ggcgggtcgt cgcggtcgag
    13441 aattacggcg ccggcgacct gctcgaggtt caaggtccct cgggcaggag cgcgctcatt
    13501 ccgttcaagc ccggaatcgc agaccaacag ggcgagaaga tcgtcgtcga tcccgaattt
    13561 ctcgcctagt cgccgtccgc cgccttatcc atctcccggc cgctttcgcg tagcagcggc
    13621 ttcctcgccg cgaggtcgtt gcgtatcgcc gttgcggcaa cgcccgcctg tcccatcgcg
    13681 tgactgatct ggtcgagccc gatgacaatg tcgccggcgg catagaggcc ggggacgctg
    13741 gtccgctggt gttcgtcggt ggcgacgcag ccgttgcccg caagcttggc gccggcctga
    13801 tcggccagca gcacatgcgg atcagacccg agcgccggat agacgctatc gaacgtgtgg
    13861 gtgccttcgg cggtctcgac gacgatgcag ccgtcggaga tggcgacagc tcgtgcgggg
    13921 ccgtcgatgc agtcgatcct ggcaaccttg agcttctcct ggtcgtcggg cgctaggtcg
    13981 agcgccttgt ccggcgcgat cagcgtgacg tcgggcgtgt agccgcggat gaacactgct
    14041 tctgcgactc catggctgtc gcctccgatc accccgatag tcttgtcggt gacctcatag
    14101 ccgtcgcaga tggggcagta gcggatgagg ccccgcgcca gcgcctcgtc gtggaggtcc
    14161 tcttccatcg gcggccggcg gttgcgggtg ccggtggcga gaagcaccgt tttcgcctcg
    14221 accgagccct tgccccaggt cgcgcagaag cggccatcgg cgcgctcgag ccgggcgatg
    14281 aatccgtcct cgatcctggc accgtagagc tgcgcctgct cccgcatccg cttcagcact
    14341 tccttgccgc tgattccgtc ggggaagccg gccagattgt gggtgcacgg gatgctcgcc
    14401 gcccggccat tgccgtcatc gacgacgagg atcttgaggt ggaatcgggc caggtagatt
    14461 gcggcggtaa gcccggcggg cccgccgccg acgatcaggc agtcgagggg ttcgtccatg
    14521 gggcgctaat cgtcctgcct gtgagcggtt cccgctggct caatctttgg cgtggcaata
    14581 gtctggctcg atggtctggc tgctcctgct gttggtagct gccttcggcg tcctcgccgg
    14641 cgctgcggct gaggtcgcgc tcgttcgatt ccgggaaagg tggactccgc gccggcgcgt
    14701 attcacggcg gcagcggcgg cgccatccat tatcgcggcc ccactcctcg tcagccttgc
    14761 ggcgatgctt ttgtacccca gcagcgcagt cggcgatctg cccttcgcaa gaatcgtcac
    14821 gctcgggctg tcggctggcc tcgccgcctt catcggcggg atcatcgtcg ccttcgctat
    14881 cgagcgcacg ctccacccgt gaccggaatt tggcggctga cggtgcgccg gaaagcggcc
    14941 tggcggccaa aaggaccgga cttccggccc cggcggattg ccgttcgccg ggttcgggcc
    15001 tagccccccg cggatgaact ggaccgtcct cgtcatcgcc ttctgcctgg ccgtgctcgc
    15061 cggtgcgatt tcagccacga cccttgcccg gatgcgcccc gattggagca accgccggcg
    15121 gctcgtcgtc gcttcggccg ttcttccggg agttaccttg cttgcctccg gtgtcctggc
    15181 cgcgatcatc cttctttcgg atgccggcga aggcgaggac atgcgcgatc ttgccgccgc
    15241 ctccgtcgtc acatttggcg gggcgttcgc gctgctggcc ttgctcggcg gcctcatcgg
    15301 ggcggggctc cggcagcggg ggatgaaaag gtgagttttc gggcgtcggt cctgacgctt
    15361 tatccggaca tgtttccggg cccgctcggg atcagcctcg ccggcaaggc cctgggggaa
    15421 ggcgcctggt cgctcgacac catccaaatt cgtgatttcg cgaccgacaa gcaccgaagc
    15481 gtcgacgata ccccggccgg gggaggggcg gggatggtgc tccggcccga tgttgtctcg
    15541 gccgcgctcg acagcgttgc cgacggccgt ccgatcctcg ctctcacccc acgcggaaag
    15601 ccactgacgc aagccaaagt gcgcgagctc gcggccagcg acggcgtcat cctcctgtgt
    15661 ggccggttcg agggattcga cgagcggatc ttcgatgcga ggtccatcga ggaagtgtcg
    15721 atcggcgact atgtcctctc cggcggcgag atcggggcaa tggtgatcct cgatgcttgc
    15781 gtaaggctcc ttcccggggt aatgggcgcg gcctccagcg gagaggagga gagcttcgag
    15841 caaggtctcc tggaatatcc gcactatacc cggcctgtaa catgggaagg gcgcacgatc
    15901 cccgaagtgc tgcgatcggg ggatcatgcg aagatcgcgg cgtggcgcca tgagcgctcg
    15961 ctcgaagaca cacggctaag gcggccggac ctgatcgagc gccacggggg cgcatcgcag
    16021 gcaccgccct ctggcgcgcg gcgacgagat acgaaggctg atttgaaatg aacctcatcg
    16081 agactctcga gcgcgaggca atcgacgctc tcaccgctga caagacgatc cccgaattcc
    16141 ggcccggcga cacgctgaag gtcggcgtca aggtggtcga aggcgaccgc gcccgtgtcc
    16201 agaatttcga gggcgtgtgc atcgcgcgct ccaacaaggg cgtcggctcc agcttcaccg
    16261 tccgcaagat cagcttcggc gagggcgtcg agcgcgtgtt cccgctctat tcgccggcga
    16321 tcgattcgat cgaggtcgtc cgccgcggtg cagtccgccg ggccaagctc tattatttgc
    16381 gcggccgcac cggaaaggcc gcccgaattg ccgagcgccg tacgatccag cgcgatatcc
    16441 cggcgggcga gggcgcgcag gccgaagcgc ccggcggcgg caagaccaaa gcctgaccct
    16501 ttcgacgagc gggggtttat ctcccccgtt taatcagcaa caaatggggc gtcccgtgtc
    16561 ggggcgccct ctttgtatgc gcgcgaaagg atctgccgcc gatgcacact gtcgcattgc
    16621 tcacagccgg cctgcttgcc gccgcccttc cagctggggc cggcgccgct cttcccgttc
    16681 ctcccggagc cgaacagaag ccgctgacgc tcgaacggat tttcggctcg ccgtcgctta
    16741 acggccctgc tccccgggga gtgaagctct cgcccaaggg cgacctcctg tcgatgctcc
    16801 gcaaccgcga ggccgaccgt gagcgctacg acctgtgggt gatggacacg aacagcggcc
    16861 agtggcggat gttggtggac agcgaaaagg tcggcaccgg cgccgagctc agcgaggccg
    16921 agaagatgca gcgcgaacgg gcgcgcatcg gcagcctcaa gggcatcgtc aattatcaat
    16981 gggctccgga cggcaacgcg atcctcgtcc cgctcgacgg cgacctctat ctcgccagcc
    17041 tcgacggcac ggttacccgg ctgacctcca gcaaggacag cgagctcaat cccgacatca
    17101 gccccaaggg ccgctacgtc agcttcgtcc gcgaccagaa gctgtgggtc ggcccgatcg
    17161 gcggcagcgc gaaagcgatt acgccgggcg gcggcgacat ccactatggc gaggccgagt
    17221 tcgtcgccca ggaggagctc ggccggctca ccggttattg gtggagcccg aacgacgacc
    17281 ggctggccgt cgaatggttc gacgaatcca atgtcgcggt cgtcacccgc accgccatcg
    17341 gcgccgagga aaccaagacg ttcgaacagc gctacccggc cgccggaacc gacaatatcg
    17401 taccgcacct gatcctcatc aatccggacg gcagccgcaa ggtcgaggcc gatctcggca
    17461 aggacaccga catctacctt gcccgggtcg attgggcgaa ggacggcaag acggtcttcg
    17521 cgcagatcct caaccgcaac caggaccggc tcgacatgct ggcgatcgac ccggcgacgg
    17581 gcaagagccg agtattgttc agcgaaaccg cagcgcaggg ccactggatc aacctcgccg
    17641 attacaaatg gctcgaggac ggcagcctcg tctggtcgtc ggaacgaagc gggcttgcgc
    17701 agctctaccg gttcaacgac ggccaatgga cccaattgac gaacatggcc ggcccggtga
    17761 cctcactcga cggagtcaat gaggagcgcg gcctcgtcta tttcgaaagc aacgccgccg
    17821 acccgctatc caaccagatc tacgtcacca gcctttcagg cggcactccg cggatgatca
    17881 gcgaccccgc gttcaagaac ggcgcgagca tggacaagaa ggcgactcgg ctgatcgtca
    17941 gcaggacttc gccgacccag cccgggcaaa gctatctcgc cgacgagaac gggcagcgga
    18001 tcgcctggat cgagcagaat gcgctcgacg ccaaacaccc ttatgcgccc tatctcgcaa
    18061 gccatgagct cgcccgctac ggctcgatca agggcccgag cggcgacacg ctctactgga
    18121 agatgatcac gccgccgaac atggccgcgg gcaagcgcta ccccgtcttc ttcgaacatt
    18181 atggcggccc gcattcgcag accgtcagca agggcttcga cggcgggctc gaccaatatc
    18241 ttgtcgacca gggctatatc gtcttcgaga tcgacaatcg cggctcggcc aaccgcggag
    18301 tcgacttcga aaagccgatt taccgggcga tgggctcggt cgaggtcgag gaccagaagg
    18361 ccggcgccga ttttctcaag accctgccgt tcgtcgatcc cgaccggatc gccacgtacg
    18421 gatggtccta cggcggctac atgaccctga agatgctgga ggcgaacccc ggcacctacg
    18481 cggccgggat cgccggcgcc ccggtcacga agtgggagtt ttacgacacg gcctacaccg
    18541 agcgctacat gggcgacccg cgcaaggtcc ccgatgcgta ccggaaggcc gacgccatcg
    18601 acgatgccgg caagatccgc gacccgctgc tcatcatcca cggaatgagc gacgacaatg
    18661 tcgtcttcac caactcaacg gccctgttct cgaagcttca ggaagaagct gtgccgttcg
    18721 agatgatggt ctatccgggc tacacgcatc gcgtcggcgg gccgaagatc tcggtccacg
    18781 tgtggcggac gatcctcgac ttcatgcgcc gcaacggggt tccgccgggt cctcgctagc
    18841 tgcgccgccg cgtggcgatc gcgcttcggt cgaccagccg cgtgtagaga tgccacgtgg
    18901 catagccgag ccacggcagg acgaccgcga ggccgatgaa cagcggtatc gagccggcaa
    18961 tcaggagcgc cgcgacgatg atcccccagc gcagcatcgc gcccgggttt tcgcgggtgg
    19021 cgcggatcga ggtcctgacc gcgtccgccg cgctcacgtc attgtccaca agcatcggca
    19081 tcgacacgac gcttagcgcc aggacggcgg tggcgaagac gattccgacg atgcttccga
    19141 tcaggatcat tgcccagccc ctgccggtcg tgaagacatc gccgaggaag gcggtgaccg
    19201 aagccggctc gttccagccg aacaaggcga cataaagggc tccggcggca attagccaaa
    19261 ggacgaaaat cgccaggagc agcgccgaga cggcggcgat ttcgtcgaac gacgggcgct
    19321 tgcgaacgtc gaggaagtgc ggccaattgg aatgcaggcc catctccctg cgccgcgcca
    19381 tttcgtaaaa gccgaccgcg gcgacgggcc caagcaatcc gatcccggcc gcgatcggaa
    19441 ggaacagcgg gatcagcggg ccgccgaggg tcgcgaccgc ggcaatgatc ccgatcaccg
    19501 ggtacaggat catcaggaag atgatgtcgc cgcgcatctc catgaagtcg ctccagccgt
    19561 cggcaagcga gcggttgagg tccgtggcgt cgatcttccg caccggaatt ttgcgtttgc
    19621 ccgtgccggc cggcttcttc ggagtggaac cggacatcgt tctagctgcc attgcgctct
    19681 cctcggttcg ggaggctcac cggcgaagag gcgccgggcg cccgcacggg caagcctata
    19741 acacaaaaag accgggagtc gggccaggcc aacggcggga gcccaacgaa atttcgcttc
    19801 ggcttgttcg cggcgactca cgcgccatat cgattccgcc ggaaaggtgc ggtaggcgcc
    19861 gccgcaagga gacacacatg ggctatcgcg tcgccgtcgt tggcgccacc ggcaatgtcg
    19921 gccaggagat cctcaacatc ctcgccgagc gccaattccc gctcgacgag atcgcggccg
    19981 tcgcctcttc gcgctcgacc ggcgacgtca tcgacttcgg cgacagcggc aaggagctca
    20041 aggtcaagaa cctcgagcat ttcgatttct cgggc
//
LOCUS       DATAKH010000080        15566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_17038,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000080 DATAKH010000000
VERSION     DATAKH010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 15566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15566
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17038"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..669
                     /locus_tag="VHN55_03250"
     CDS             <1..669
                     /locus_tag="VHN55_03250"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEX2802987.1"
                     /translation="VEQSSVKKGETLEDTARTLNAMSPDALVIRHRENGAPARVAEIM
                     DCAVINAGDGTNEHPTQALLDALTIRSHFGRIEGLTVAICGDIRHSRVAHSNAILLPR
                     LGARVRLAGPPMLMPDDLLPPISVDEAIEGADVVMMLRVQRERLADDLGDAPGEYLER
                     YGLTAERLEKASPKAVVMHPGPMNRGVEIDGAIADDPQRSLIMRQVENGVAVRMACLE
                     AVLA"
     gene            complement(666..2012)
                     /locus_tag="VHN55_03255"
     CDS             complement(666..2012)
                     /locus_tag="VHN55_03255"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2802988.1"
                     /translation="MNRPNRLATALSTVATAALLAGCAAGHQNRSSLAVSKVDREKVG
                     LATRAQVALSSGQFAAAVEFAERAVSYTPDDAGFRALLANCYFASGRFASAEQAYRDS
                     LTLAPNQVDLVLKLALVQIAQGKNGPALALLHQARNVLDPADYGLAVALAGRADEAVA
                     VLDSAARRVGSDARVRQNLALAYGLAGDWTMARTVAEQDVAPDQVDSRIQQWMAIATP
                     SRPSDQVAMLTGIRPSIDPGQPQALALNGSPQIERYAELAVPQAQPQPQPVQIPEVAP
                     PALPEPMPSPAVAEAEIAPAPVVAEAARSLLTAEATSVEPQVVEAKLVDEAPTSFEAA
                     PEPPKFVAISDTVRRAAKKGRGKSRSVVQLGAYSSPDRVSAAWEVLTKRYPALAEYTP
                     MRAKFDGPKGTVWRLSIKGFASDGEARSRCELLQSRDGNCFVRTVAGDAPVQFASR"
     gene            complement(2017..2745)
                     /locus_tag="VHN55_03260"
     CDS             complement(2017..2745)
                     /locus_tag="VHN55_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017500648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802989.1"
                     /translation="MNTEPKPFASLSSGLLARKGAARPAMRPQGFGQVAGLEDLGWND
                     MGFEPPKPADTPDPDAEHDAFGEVVPAHPHNLAGLTPVDSPVHNQQAEIAGRLSAFDP
                     EDAGDEADEIDDTAELYDPEAGESEGPVLKIKPAAKAEPVAEVTPEFEPVAVEPAAKV
                     DPVQRTQPAPAPRRRTKARSAPGSKAKAAFTLRLDPERHLKLRLACAVDGRSAQMLVT
                     EALDQLLGAMPELETIAQKAKRKG"
     gene            complement(2758..3480)
                     /locus_tag="VHN55_03265"
     CDS             complement(2758..3480)
                     /locus_tag="VHN55_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEX2802990.1"
                     /translation="MRVLAMASQKGGSGKTTLSGHLAVQAQLAGAGPVCLIDIDPQGS
                     LADWWNEREADMPAFAQTTVARLASDLEVLRQQGFRLAVIDTPPAITMAIQSVIAVAE
                     LIVIPTRPSPHDLRAVGATVDLCDRAGKPLIFVVNAATPKAKITYEAAVALSQHGTVA
                     PVTVHHRTDFAASMIDGRTVMEIDPSGRSAREVIELWDYISDRLEKNFRRTVFAAPSA
                     APGISQASPRPVGGFGRRVVGQ"
     gene            3661..4506
                     /locus_tag="VHN55_03270"
     CDS             3661..4506
                     /locus_tag="VHN55_03270"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEX2802991.1"
                     /translation="MAGTSQAAAQKTVRDGIAAWQKADYAAAVAIWKPLAEKGDADAA
                     FNLGQAYRLGRGAAVDLAAAKGWYERAAAAGHLDAQTTLGLLLFDSGSREAAIGWLKK
                     AAERGDARAMLVYGTALFNGDGTKRDPVMAYAYVSRAAAQGLEPAKSTLQELDSVLPL
                     DVRRRGVDVALKKASAKPPAAAKPTLKPKPPATPPARQAAATAPAGSWRIQLGAFGKR
                     ETAESLYRKLSASPPVSGHPAIYVPVGAITRLQVGGFASRAAAAAACSTLSARGQACF
                     PVAGK"
     gene            complement(4510..5388)
                     /gene="serB"
                     /locus_tag="VHN55_03275"
     CDS             complement(4510..5388)
                     /gene="serB"
                     /locus_tag="VHN55_03275"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010164323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEX2802992.1"
                     /translation="MLLATLIAAGRLDDRLVDRALGLLREIDPKARFGAWIDEGDAVD
                     LHVSGDIAAIRWALESLPEVDSVVQPAEPRFRKLLVADMDSTIIGQECIDELADFAGL
                     KREVAEITERAMQGKLDFKAALRERVALLSGLEEDAIARCLAERVVPNPGAATLVRTM
                     RVGGASTLLVSGGFLSFAEPVARMIGFDRVRANRLLFDGSQLSGRVEDPIVDGQAKLD
                     ALLETCGEIGIGTEAAVAIGDGANDRLMIEQAGLGVAYRAKPALAEVADAKIEHHGLE
                     ALLWAQGIRKKEWVRG"
     gene            5387..6313
                     /gene="miaA"
                     /locus_tag="VHN55_03280"
     CDS             5387..6313
                     /gene="miaA"
                     /locus_tag="VHN55_03280"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008065995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEX2802993.1"
                     /translation="MKNAPPLALIAGPTASGKSALALALAECTGGVIVNADSAQIYRD
                     LPVISAAPTAEDRSRADHRLYAICDGADPCSAADWARLAKAEIADIHSSGRLPILVGG
                     TGLYLRTLLEGIAPVPTIDRRVRDRVRTRPVDDNRAELEKVDPAAAERLHSGDSTRIA
                     RALEVVLSTGRPLADWQGRREGGIGASIDLKPLVLLPPREWLYERCDRRFEEMVEAGA
                     VDEVKALLARELDPSLPVMRAIGVREIAAFFSGEIDRDEMIARGQQATRNYAKRQYTW
                     FAHQPPAHWPRFTGELTEVALPQALALLHSRA"
     gene            6323..7300
                     /gene="ilvC"
                     /locus_tag="VHN55_03285"
     CDS             6323..7300
                     /gene="ilvC"
                     /locus_tag="VHN55_03285"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: protein motif:HMM:NF004017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEX2802994.1"
                     /translation="MELIREKDIDPAPLKGKRVAILGFGNQGRPQALNLKESGVDVVV
                     GLRGSSLNRTIAEKLGLKVASVEDATASAQVVMLLAPDEVLGDLYREIEPLLGPGAAL
                     GFSHGLAVHFGLLRPREDLDVYLVAPKGPGTALRALYKEGKGMVALWAVAQDKSGSAR
                     ALALAYGRAIGCARAGLIASTFEEEAVADLFNENAVVWGGVPELLRAGFETLVDAGIS
                     PEVAYMECVGELKLIADLIDSKGIAGMREVISNTAEFGAVRGGPAVIGPEVRERMEEV
                     LELVRSGAFAKALREEATEDYPELRQARTAAQSLPIEQAYRNLKTISDR"
     gene            complement(7297..7482)
                     /locus_tag="VHN55_03290"
     CDS             complement(7297..7482)
                     /locus_tag="VHN55_03290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802995.1"
                     /translation="MEEQNGSRDRAYYAQRAAEELELAQSASDEDAATAHRKLQRAYL
                     ERASVGEREMPVPDEIG"
     gene            complement(7585..7929)
                     /locus_tag="VHN55_03295"
     CDS             complement(7585..7929)
                     /locus_tag="VHN55_03295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2802996.1"
                     /translation="MRAATLLAIALFWAAPALAQPFTSTSSAEQRLQLQSQDPRLKVG
                     RNSFALPVVNYVAPDGTFKKGSGIIVGHDIGPGATVGLGLFKMKPKYKDDSYRPAGEK
                     SKKVAVGLSVRF"
     gene            complement(8010..9734)
                     /gene="mutL"
                     /locus_tag="VHN55_03300"
     CDS             complement(8010..9734)
                     /gene="mutL"
                     /locus_tag="VHN55_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004212360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEX2802997.1"
                     /translation="MSIRRLPSELVDRIAAGEVVERPASAVKELVENALDAGAENVTV
                     RLSGGGIGLIEVVDDGIGMSRDDMALALERHATSKVPGDNIDLVTSFGFRGEALPSIA
                     SVSRLTLDSRTRSGDGWRIVVDHGRKITEGPAALPPGTRVRIEDLFERVPARRKFLRS
                     PRAEYSAALDAVKRLAMARADVAFTLEHDGRKILSLQPSSAPPRVAALLASELEKHGV
                     GIDCVRDGLGLTGVVSLPTFNRGVGDQQYLFVNSRPVKDRLLVGALRAAYRDLIARDR
                     HPIAALFLSVPLDEVDVNVHPAKTEVRFRDSAAVRGLIVGGIRSALDAESHRSAAREQ
                     SAAPVVWTSGATSPQPPPSGVREERALFTGIRVEPSGRAEPAVEPVQSYPLGVARGQV
                     ANTYIVAEADDGLVIVDQHAAHERLVLERLRAARSGGTVPRQDLLIPEVVELDEPECD
                     RIEGAMAELGGLGLELERFGPTSILVRSVPAALRGPDVGRLLSDLAGEIAELGSALSL
                     KERLDHVEATIACHGSVRAGRVLSVAEMNALLREMEVTPRSGQCNHGRPTWVKLAHSD
                     IEKLFGRK"
     gene            9886..10929
                     /locus_tag="VHN55_03305"
     CDS             9886..10929
                     /locus_tag="VHN55_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX2802998.1"
                     /translation="MFWTRWFKWMSHDMAIDLGTANTLVYVRGRGIVLNEPSVVAIET
                     INGVKRVKAVGDDAKLMMGKTPDQIEAIRPLRDGVIADIDVAEQMIKHFIHKVHGGKM
                     RAWRFPEIVICVPSGSTSVERRAIRDAASNAGASAVYLIEEPMAAAIGADMPVTEPIG
                     SMVVDIGGGTTEVAVLSLRGLAYTTSVRVGGDKMDEAISSYVRRNHNLLIGEATAERI
                     KTEVGIAKPPTDGIGQTVHIKGRDLVNGVPKEISINQGQIAEALSEPVGTIVEGVRIA
                     LENTAPELAADICDQGIVLTGGGALLQGLDEVLRDETGLPVTVAEDPLTCVALGTGRA
                     LEEEQFRGVLQTA"
     gene            10944..11819
                     /gene="mreC"
                     /locus_tag="VHN55_03310"
     CDS             10944..11819
                     /gene="mreC"
                     /locus_tag="VHN55_03310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005618 - cell wall [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEX2802999.1"
                     /translation="MAAPRPGWSRRAQYGLFFSFIAAIAGVAVGLILLAFSIAAPNQF
                     KDLRGAALDATSPITAALYQVSATAEGLASGAGNYWDAASQNAQLRRERDLMREQLVT
                     ARAILQENRQLKAALQLRERTPGAVASGRLVGSSFQSPRRFAILSAGSSDGVRIGMPV
                     RAARGLIGRTVDVGAFASRVLLISDRSSIVPARLLRTGQPVICQGRGDGSIELKPLEV
                     GRNPFRPGDIVITSGTGGLYPPLVPIARVTRISGDNAIALPLADPGAVSFAIAERAYE
                     PKAMAPLTDHAEELR"
     gene            11819..12343
                     /gene="mreD"
                     /locus_tag="VHN55_03315"
     CDS             11819..12343
                     /gene="mreD"
                     /locus_tag="VHN55_03315"
                     /inference="COORDINATES: protein motif:HMM:TIGR03426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEX2803000.1"
                     /translation="MVRSALASKQRIGQGPKAGAAYVPAASVAIATLLSSLPIISANG
                     WYPDFAFLMLIGWRLRRSDVWPSWWAAPLGLLNDLASGDPLGLSVTIWTVSMLALDLV
                     DRRTIWRDYWIEWAFAALLILFYQAAQWQVAAWMGARVPFAFMLPSISISIAAFPVAA
                     WLVGRVDHWRLGQK"
     gene            12340..14253
                     /gene="mrdA"
                     /locus_tag="VHN55_03320"
     CDS             12340..14253
                     /gene="mrdA"
                     /locus_tag="VHN55_03320"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEX2803001.1"
                     /translation="MKHQRFTSVHQSISFSRRMMVFGGVQAAVGAVLVGRLGWLAVAQ
                     NEKYQLMSENNRVQLIVVPPRRGWLVDRKGKPIAINRSDFRVDIIPQQLENPETTLKL
                     LSRLLELDRDALDRILEELKGSRGYKPIEVAASVPYEQYAAVTVHLPELPGVQPTRGF
                     SRYYPDGPAVAHLVGYVGTASEKEYEAENNPLLITPGFKIGKAGLEKTLEPQLRGQPG
                     GQRVEVTARGKLIKELDPKPDRSGQTVQLTIDSELQAFAARRMGDESGSLVLMDCHTG
                     DILAFVSMPAYDPNSFSQGIGRTEWRMLSDDDHLPLLNKITQGLYPPGSTIKPMNALA
                     LLQHGIDPTQRIHCPGGYQLGNRFFRCLGRHGSVDMRRAIAKSCNTYFYAMGHKVGYD
                     KIAPMARRLGLGATFDLPVVTQNYGTVPDSAWQARKFKQNKNLVERPDWTASDTLNAS
                     IGQGFLLLNPLQLAVMAARIASGRDVQPQLLGVHDTPAPMLGLPPEHLEIVRGGMWQV
                     VNGDGTAGASRLPLKGIEMSGKTGTAQVRRIAGGQRGQGGDWKYRDHGLYVFFAPSDK
                     PRYAGAVVIEHGMGGARAGAPVAKDVLTFLFDRQLAMKNLTALEEQWGGTLAERNERR
                     AAAFKAAARAPSA"
     gene            14250..15380
                     /gene="rodA"
                     /locus_tag="VHN55_03325"
     CDS             14250..15380
                     /gene="rodA"
                     /locus_tag="VHN55_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEX2803002.1"
                     /translation="MISSAILPQPLARLPWRLLFLIAGIATIGLLTLYSAAGGSMRPW
                     ALKQAIIIGGFLVIAIAMSWTRESTIKQVAFPLYAVVLLMLVLVEMLGFVGKGAQRWL
                     DIGPIRLQPSEFMKPAIVLVLARFYDLLPPSDIRRRRAVWPAALLLGIPVLLILVQPD
                     MGTALMVLFIGATVMFVAGLPWWLFAGAFAAVAVAAPIAFTMMHEYQRKRVLIFLNPE
                     NDPLGSGYHITQSKIAIGSGGLFGKGYLQGSQSHLDYLPEGHTDFVFSAMVEEWGFVG
                     GLVLILAFGLVIRWGMKVSARARSRFSQLAAAGLTATVFYYVGINLMMVMGLAPVVGV
                     PLPLVSFGGSAVMTIMLSIGLLMAIERQQRGAPGLSTTRIPA"
     gene            15461..15536
                     /locus_tag="VHN55_03330"
     tRNA            15461..15536
                     /locus_tag="VHN55_03330"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15494..15496,aa:Lys,seq:ctt)
BASE COUNT         2639 a         5159 c         5102 g         2666 t
ORIGIN      
        1 gtcgagcaat cgtcggtgaa gaaaggcgag acgctcgaag acacggcgcg aaccctcaat
       61 gcgatgagtc ccgatgcgct tgtgatccgg caccgagaaa acggcgctcc cgcgcgagtg
      121 gccgaaatca tggattgcgc cgtgatcaac gctggcgacg gcactaacga gcacccgacg
      181 caggcgctac tcgacgcgct gacgatccgt tcgcatttcg gccggatcga agggctgacc
      241 gtcgcgattt gcggcgacat ccgtcacagc cgggtcgccc attcgaacgc gatcctcctg
      301 cctcgcctcg gagcaagggt ccggctggca ggcccgccga tgctgatgcc cgacgacctg
      361 cttcccccga tctccgttga cgaggcgatc gagggcgccg acgtggtgat gatgctgcga
      421 gtccagcgcg agcggctggc cgacgacctc ggcgatgcgc cgggcgaata tctggagcgt
      481 tacgggttga ccgccgagcg gctggaaaaa gcctctccca aagcggtggt gatgcacccc
      541 ggtccgatga accgaggcgt ggaaatcgac ggagcaatcg cggacgaccc gcagcggtcg
      601 ctgatcatgc gccaggtcga aaacggtgtg gcagtgcgga tggcctgcct tgaagcagtg
      661 cttgcctaac gcgaggcgaa ctggaccgga gcgtcgccgg cgacggttcg aacgaagcaa
      721 ttgccgtccc ggctctgcag gagctcgcag cgcgaccgtg cttcaccgtc gctggcaaag
      781 cccttgatcg aaagccgcca caccgtgccc ttcggaccgt cgaacttggc gcgcatcggc
      841 gtatattcgg caagggccgg atagcgcttc gtaaggacct cccacgcggc cgacacgcgg
      901 tcgggcgagc tgtaagcgcc gagctgcact accgacctgg acttgccgcg ccccttcttt
      961 gcagcgcggc ggaccgtgtc gctgattgca acgaacttcg gcggctcggg tgcagcctcg
     1021 aaactcgtcg gagcttcgtc gaccagcttg gcctcgacga cttgcggctc gacacttgtc
     1081 gcttccgcgg tgagcagaga gcgggctgcc tcggcaacca ctggggccgg agcgatttcg
     1141 gcttcggcga ccgccggcga aggcatcggc tccggaagcg cgggcggcgc gacttcggga
     1201 atttggacag gctgcggttg cggctgggct tgtggcacag ccagctccgc gtagcgctcg
     1261 atctggggtg agccgttgag ggcgagcgcc tgcggctggc ccgggtcgat gctgggacgg
     1321 ataccggtca gcatcgcgac ctggtcggac ggccgcgacg gagttgcgat cgccatccac
     1381 tgctggattc gtgaatccac ctgatccggc gcgacgtcct gctcggcgac cgttcgggcc
     1441 atcgtccagt ccccggccaa gccataggca agcgccaggt tctggcggac tcgagcatcg
     1501 gaccccaccc ttcgagccgc cgagtcgagg acggccacgg cttcgtcggc tcgaccggca
     1561 agagcaaccg ccaggccgta atcggccggg tcgagtacgt tgcgcgcctg gtggagcaga
     1621 gcgagcgccg gaccgttctt tccttgcgcg atctgcacca gcgccagctt caggaccagg
     1681 tcgacctggt tcggcgcgag agtcagcgag tcgcggtagg cctgctcggc cgaagcaaag
     1741 cggcccgaag cgaaatagca attggcaagg agcgcgcgga agccagcgtc atcgggcgtg
     1801 taggaaaccg cgcgttcggc aaattcgacg gcggccgcaa actgtccgct cgaaagcgcc
     1861 acctgggcgc gggtcgcgag gccgactttc tcacggtcga ctttcgagac ggcgagcgac
     1921 gagcgatttt ggtgaccggc ggcgcagcct gccagcaggg cagcagtcgc tacggtggac
     1981 agtgcggttg caaggcggtt cggccggttc atttcttcat cccttccgtt ttgccttttg
     2041 ggcaatcgtt tccagctcgg gcatcgcacc gagaagctgg tcgagcgctt ctgtgaccag
     2101 catttgtgcg gagcggccgt cgacggcgca ggcaagccga agcttgagat gccgttcagg
     2161 gtcgaggcga agcgtgaacg ctgctttcgc cttgctcccc ggcgcggacc gggccttggt
     2221 ccggcggcgt ggcgccggcg cgggctgcgt cctttgaacc ggatcgacct tcgccgcggg
     2281 ttcaacggcg accggttcga attccggagt aacttccgcg accggctcgg ccttggcggc
     2341 cggcttgatc ttgagaactg gtccctcgga ctctccggct tcgggatcat agagctcggc
     2401 ggtgtcgtcg atctcatccg cttcatcacc ggcgtcttcg gggtcgaaag ccgaaagcct
     2461 gccggcaatt tccgcctgct ggttgtggac cggcgaatcc actggagtca gtccggccaa
     2521 attgtgcggg tgtgccggaa caacctcgcc gaaagcgtca tgctcggcgt ctggatccgg
     2581 agtgtccgcc ggcttcgggg gctcgaaccc catgtcgttc cagccaaggt cctcaagtcc
     2641 ggcgacctgg ccgaacccct gcgggcgcat tgccgggcga gccgcgccct tgcgggcgag
     2701 gaggccggag gagagcgaag cgaaaggctt gggctcggtg ttcactcagt ccccctgtta
     2761 ctggcccacc acgcggcggc cgaagccacc gactggacgc ggacttgcct ggctgatgcc
     2821 gggcgcggca ctgggagcag cgaaaaccgt gcggcggaaa ttcttttcga gccggtcgga
     2881 gatatagtcc caaagttcga tgacctcgcg ggccgaacgg ccgctggggt cgatctccat
     2941 cacggtacgg ccatcgatca tcgaggccgc gaagtcggtc cggtgatgaa cggtgacagg
     3001 agcgacggtg ccatgctgcg agagcgcgac cgccgcctcg taggtgattt tggctttcgg
     3061 cgtcgccgca ttgactacga agatgagcgg ctttcctgca cggtcgcaaa ggtcgacggt
     3121 agcgccgacg gcgcgaaggt cgtgcgggct cggccgggtc ggaatgacga tcagctcggc
     3181 gaccgcgatg acgctctgga tggccatggt gatggcgggc ggagtgtcga taactgcgag
     3241 gcggaagccc tgctggcgga gaacctcgag atccgaggcg agccgtgcga cggtggtctg
     3301 ggcgaaggcg ggcatgtcgg cctcacgctc gttccaccag tcggcgagac tgccctgcgg
     3361 gtcgatgtcg atcaggcaaa cgggaccggc gcccgcaagc tgagcctgca ccgcgaggtg
     3421 tccggaaaga gtcgtctttc ctgatccgcc cttctgcgat gccattgcga gaacgcgcat
     3481 gttttcccct gccccttttg cgatcgatcg aggcgggagt gacacccaag gctctaaaat
     3541 ctggttaatg ccggcaagac actgttgccc gaatctgcaa ctcggctagg ctggggccaa
     3601 gaagatgggg cgggcatgaa gtttaaccga ttcagcttgt tagcgtttgc cgcggcaatg
     3661 atggccggta cttcccaagc ggcggcgcaa aagaccgtcc gcgacggcat cgctgcctgg
     3721 cagaaggcgg attatgcggc tgcggtggca atctggaagc cgcttgcgga gaaaggcgat
     3781 gccgacgccg ccttcaatct cggccaggcc tatcgcctcg gtcggggagc ggcggtcgac
     3841 ctggccgctg ccaagggctg gtacgaaagg gccgccgccg caggtcacct cgacgcccag
     3901 accaccctcg gcctgctgtt gttcgacagc ggcagccgcg aagccgccat cggctggctc
     3961 aagaaggcgg cggagcgcgg cgacgcacgg gcaatgctgg tctacggcac cgcgctgttc
     4021 aacggcgacg ggaccaagcg cgacccggtg atggcctacg cctacgtcag ccgtgccgcg
     4081 gcccagggac tcgagccggc aaagtccacc ctgcaggaac tggattcggt gcttcccctc
     4141 gatgtacgcc ggcgcggagt cgacgtggcg ctcaagaaag cttcggcgaa gcccccggcg
     4201 gcggccaagc ctacgctcaa gccaaagccg cccgcgacgc ctcccgccag gcaagctgcg
     4261 gcaaccgcgc cggccggctc ctggcggatc cagctcggcg ccttcggcaa acgcgaaacc
     4321 gcagaatccc tgtatcgcaa gctctcggcg tcgccgccgg tttcggggca ccccgcaatt
     4381 tacgtgccgg tcggcgcgat cacccggctc caggtcggcg ggttcgcctc gcgcgccgcg
     4441 gcggccgccg cctgctcgac attgtcggcc aggggacagg cctgtttccc agtggcaggc
     4501 aaatagcccc tagccgcgaa cccactcctt cttgcggatg ccctgcgccc acagcaacgc
     4561 ttcgagcccg tggtgctcga tcttcgcgtc ggcgacctct gcgagcgccg gcttggcgcg
     4621 ataggcgact cccaggcccg cctgctcgat catcagccgg tcgttggcgc cgtcgccgat
     4681 cgccacggcc gcttcggtgc cgataccgat ctcgccgcaa gtctcgagca gcgcgtctag
     4741 cttcgcctgc ccatcgacga tcgggtcctc gacccgcccg ctcagctgcg acccgtcgaa
     4801 cagcagccgg ttggcgcgca cccggtcgaa tccgatcatc ctcgctaccg gctcggcaaa
     4861 ggacaggaac ccgcccgaca ccagcaaagt gctcgcgccg cccacccgca tcgtacggac
     4921 cagcgtcgcg gcgcccggat tgggcacgac ccgctcagcc aggcagcggg cgatcgcatc
     4981 ctcttcgagc ccggacagga gcgccacccg ctcgcggagc gcggccttga aatcgagctt
     5041 gccctgcatc gcccgctcgg tgatctccgc gacctcgcgc ttgaggcccg cgaaatcggc
     5101 gagctcgtcg atgcactcct ggccgatgat cgtcgaatcc atgtcggcga cgagcagctt
     5161 tcggaaccgc ggctccgccg gctgaaccac tgaatccact tcagggagcg attccagcgc
     5221 ccagcggatc gcggcgatgt cgcccgaaac gtgcaggtcg accgcgtccc cttcgtcgat
     5281 ccacgcgccg aaccgcgcct tggggtcgat ctcgcgaagc aggccgagcg cccgatccac
     5341 cagcctgtca tccaggcgtc ccgctgctat cagcgtggca agcaacatga agaacgcacc
     5401 tcctctggcc ttaattgccg ggccgacggc gagcggcaag tccgcgcttg ctctggcgct
     5461 cgccgaatgc acgggtgggg tcatcgtcaa tgccgacagc gcgcaaatct atcgcgacct
     5521 gcccgtgatt agtgcagcgc ccacggccga agaccggagc cgggccgatc accgtcttta
     5581 cgcgatctgc gacggcgccg acccctgctc cgccgccgac tgggcgcgat tagccaaagc
     5641 cgaaatcgca gacatccact cgtcggggcg gttgccgatc ctcgtcggcg ggacgggact
     5701 ctacctgcgc acgcttctcg agggcatcgc gccggtgccg acgattgatc ggcgcgtgcg
     5761 cgaccgcgtg cgcacgagac ctgtcgacga caaccgcgcc gagctggaga aggtcgatcc
     5821 cgccgcggcc gaacgcttgc attcaggcga cagcacaagg atcgcgcggg cgcttgaggt
     5881 ggtgctttcg accgggcggc cgctcgccga ctggcagggg cgccgcgaag gcggcatcgg
     5941 ggccagtatc gacctgaagc cgctggtcct gcttcccccc cgcgagtggc tttacgagcg
     6001 ctgcgatcgc cgcttcgagg agatggtcga agccggagcc gtcgacgagg tgaaggcgct
     6061 gctcgcccgc gaactcgacc cgtcgctgcc ggtgatgcgc gcgatcggcg tgcgcgagat
     6121 tgctgccttc ttcagcggcg aaatcgatcg cgacgagatg atcgcgcgcg gccagcaggc
     6181 cacccgcaac tacgcgaagc gccaatatac ctggttcgct caccagccac cggcgcactg
     6241 gccgagattc accggcgagc tcacagaggt ggcgttgccc caggctctgg ccctgctcca
     6301 ctcaagggcg taggcggcaa tcatggagct gatccgcgag aaggatatcg acccggcgcc
     6361 gctgaaggga aagcgggtcg ccatcctcgg attcggcaac caggggcgtc cgcaggcact
     6421 gaatctgaag gaaagcggtg tcgacgtcgt cgtcgggctc cgcggctcct cgctcaaccg
     6481 taccatcgcc gagaagctgg ggctcaaggt cgcaagcgtc gaggacgcca cggcatcggc
     6541 ccaggtcgtg atgctgctcg cacccgacga agtgctcggc gacctctacc gggaaatcga
     6601 accccttctc gggcccggag ccgccctcgg cttcagtcac ggcctcgccg tccatttcgg
     6661 tctcttgcgc ccgcgcgagg acctcgacgt ctaccttgtc gctcccaagg ggccgggcac
     6721 tgccctccgg gcgctgtaca aggagggcaa gggcatggtc gcgctgtggg cggtggcgca
     6781 ggacaagagc ggctcggctc gcgcgctcgc gcttgcctat gggcgcgcga tcggctgcgc
     6841 ccgggcgggg ctgatcgcat cgacctttga ggaagaggcg gtcgccgacc tgttcaacga
     6901 aaatgccgtc gtctggggcg gcgtccccga gctcctccga gccggtttcg aaacgctggt
     6961 cgacgccgga atttctcccg aggtcgccta catggagtgc gtcggcgagc tcaagctgat
     7021 cgccgatctg atcgattcca aggggatcgc gggcatgcgc gaggtcattt cgaacacagc
     7081 cgagttcggc gccgttcgcg gcggtccggc ggtgatcggc ccggaagttc gcgagcgcat
     7141 ggaggaggtg ctggagctcg tccgctctgg cgcgtttgcg aaagctctca gggaagaagc
     7201 gacggaggac tatccagagc ttcgccaagc gcgaacagca gcgcagtcac tgccgatcga
     7261 gcaggcgtac cggaatctga agacgatttc cgaccgctag ccgatctcgt cagggacggg
     7321 catttcgcgt tcgccgacgg aagcgcgctc gagataggcg cgctggagct tgcgatgggc
     7381 cgttgccgcg tcttcgtcgc tggccgactg ggcgagctcg agttcctcgg ccgcgcgttg
     7441 cgcgtaatac gcgcgatccc tgctgccgtt ctgctcttcc atcgccctgc tcctgctcgg
     7501 gagcggaccc tagcagcttt tcgtcgcgaa gtcgcactgt tgatcgtttg aatcctgcgg
     7561 cccaccgaag ccggcggccg gaattcagaa ccggaccgaa agccccaccg cgactttctt
     7621 cgatttttct cccgcgggac ggtaggaatc gtccttgtac ttgggcttca tcttgaacag
     7681 ccccagcccg accgtcgcac cgggcccgat gtcgtggccg acgatgattc cgctgccctt
     7741 cttgaaggtg ccgtccggcg cgacgtaatt gacgaccgga agcgcaaaac tgtttctgcc
     7801 gaccttcagg cgtggatcct gcgactgcaa ttgcaggcgc tgctcggcgg aagacgtgga
     7861 cgtgaacggc tgggcaagcg ccggcgctgc ccagaaaagc gcgattgcaa gcaacgtggc
     7921 tgcgcgcact taagcacccc tgttgtcccg gttggctcaa ccgggaccca accaccatag
     7981 ttccactcgt aacggacttg caacgagtct tatttgcggc cgaacagttt ctcgatgtcc
     8041 gagtgggcga gcttcaccca cgtcggacgg ccatgattgc actggcccga gcgcggggta
     8101 acctccatct cgcgaagaag ggcgttcatc tccgcgacgg agagcacccg ccccgccctc
     8161 accgacccgt gacaggctat ggtcgcctcg acatggtcga gccgctcctt gagcgacagc
     8221 gcggagccga gctcggcgat ttctccagcg agatcgctga gaagcctgcc cacgtcgggc
     8281 ccgcgaagcg cggcaggcac cgagcgaacc aggatcgacg tcggtccgaa ccgctcgagc
     8341 tccagcccga gaccgccaag ctcggccatc gccccttcga tccgatcgca ctcgggctcg
     8401 tcgagctcga ccacttcagg gattagcagg tcctggcgcg gaaccgtgcc acctgaacgt
     8461 gccgcgcgaa gccgctcgag gaccaggcgc tcatgggcgg catgctggtc gacgattacg
     8521 agcccgtcgt ccgcctccgc gacgatgtag gtgttggcga cctgcccgcg cgccactccc
     8581 agcgggtagg attggacggg ctcgaccgct ggctcggccc gacctgacgg ttcgacccgg
     8641 atccccgtga acagcgcccg ctcttcgcgt acgcccgaag ggggcggctg cggcgatgtc
     8701 gcaccgctgg tccagacaac cggcgcagcc gactgctcgc gggcggcgct gcgatgggat
     8761 tcggcatcga gcgcggatcg aatcccgccg acgatcaacc cacggactgc agcggagtcg
     8821 cggaatcgaa cctcggtttt ggccgggtgg acgttgacgt cgacttcgtc gagcggcacc
     8881 gaaaggaaca gcgcggcgat cggatggcgg tcgcgcgcaa tcaggtcgcg ataggcggcc
     8941 cgcaaggcgc cgaccaagag ccggtccttc accggcctcg agttcacgaa cagatattgc
     9001 tggtcgccga ctccgcggtt gaaggtcggc aggctgacca ctccggtgag gccgaggccg
     9061 tcgcggacgc agtcgattcc gacgccgtgt ttctcgagct cggaggcaag cagcgccgca
     9121 acccgggggg gagcgctcga cggctgcagc gacaggatct tgcggccgtc gtgctcgagg
     9181 gtgaatgcga cgtcggcgcg cgccatcgcg agccgcttca ccgcgtcgag ggccgccgaa
     9241 tattcggcgc gcgggctgcg caggaacttg cgccgggccg gcactctttc gaacagatcc
     9301 tcgatcctca cccgcgtccc tggcggaagc gccgcgggcc cttcggtaat cttgcgccca
     9361 tggtcgacca cgatccgcca gccgtcaccg gatcgagtgc ggctatcgag agtcaggcgc
     9421 gagacgctgg cgatcgacgg cagggcttca ccgcgaaatc cgaagctggt caccaagtcg
     9481 atattgtcgc cgggcacctt cgatgtcgcg tggcgttcga gcgcaagcgc catgtcgtcg
     9541 cggctcattc cgattccgtc gtcgacgact tcgatgagcc cgatgccgcc gccggagagc
     9601 cgcaccgtca cattttcggc gccggcatcc aatgcgtttt cgacgagttc cttgaccgcg
     9661 ctcgctggcc gttcgaccac ttcgccggcg gcgatcctgt cgaccagctc ggagggcagt
     9721 cttcttattg acatgttaat agctctagcc caatccgaac cgtcccgcga agtgctgatt
     9781 tgaaccacgg aattcagttt gcattcaatg ggaagcggtt aattttcaat tccgtagccg
     9841 gggggtccgg ctgccggagg ggcaaggcgg agagataagc agagaatgtt ctggacgcgc
     9901 tggttcaaat ggatgtcgca cgacatggcg atcgacctcg gcaccgccaa cactttggtc
     9961 tacgtccgcg gccggggcat cgttctcaac gagccgtcgg ttgtcgcgat cgaaacgatc
    10021 aacggggtca agcgggtcaa ggcggtcggt gacgacgcca agctgatgat gggcaagact
    10081 cccgaccaga tcgaggcgat ccgcccgctt cgcgacggtg tcattgccga catcgatgtc
    10141 gccgagcaga tgatcaagca cttcatccat aaggtgcacg gcggcaagat gcgcgcctgg
    10201 cgcttcccgg aaatcgtcat ctgtgtcccg tccggatcga cttcggtcga gcgccgagcc
    10261 atccgcgatg ccgcgtccaa cgccggcgca agcgcagtct atctgatcga agagccgatg
    10321 gccgccgcga tcggggccga catgccggtc accgaaccga tcggttcgat ggttgtcgac
    10381 atcggcggcg ggaccaccga agtcgcggtg ctttcgcttc gcggcctcgc ctacacgacg
    10441 tcggtccggg tcggcgggga caagatggac gaagcgatca gctcgtacgt ccgccgcaac
    10501 cacaacctgc tgatcggcga agcgaccgcc gagcggatca agaccgaggt cgggatcgcc
    10561 aagccgccca ccgacggaat cggacaaacc gttcacatca agggccgcga cctggtgaac
    10621 ggcgtgccga aggaaatctc gatcaatcag ggccagattg cagaagcgct gtccgagccc
    10681 gtcggaacaa tcgtcgaagg cgtgcgaatc gcgcttgaga acaccgcgcc cgagctggcc
    10741 gcagacatct gcgaccaggg catcgtgcta accggaggcg gtgcgcttct ccaaggcctg
    10801 gacgaggtgc ttcgcgacga aaccgggctt ccggtaacgg ttgccgaaga cccgctgacc
    10861 tgtgttgcgc tgggaaccgg ccgagccctc gaggaagagc agttccgcgg cgttctgcag
    10921 acggcgtaag aggcccctga gcggtggcgg cgccgcgccc gggctggtcc agacgcgcgc
    10981 aatacgggct gttcttcagc ttcattgcgg cgattgccgg cgtcgccgtc gggcttatcc
    11041 tgctagcctt ctccatcgcg gccccaaacc agttcaagga cctgaggggc gccgccctcg
    11101 acgccacctc tccaatcacg gccgccctgt accaggtcag cgcaacagcc gagggccttg
    11161 cctccggggc cggtaattac tgggatgcgg cgtcccagaa cgcgcagctc cgacgcgagc
    11221 gcgacctgat gcgcgaacag ctcgtcactg cgcgggcaat cctccaggaa aatcgccagc
    11281 tcaaggcggc actgcagctt cgcgaacgca cgccgggtgc cgtcgcgtcc ggccggctcg
    11341 tcggctcatc cttccagagc cctcgccggt tcgcgatcct ctcagcgggg tcgagcgacg
    11401 gagtccggat cggaatgccg gttcgcgccg cgcgtggcct catcggccgc acggtcgatg
    11461 tcggggcgtt cgcctcgcgg gtcctgctca tctccgacag gtccagcata gtaccggcgc
    11521 ggctgcttcg aacgggacag ccggtaatct gccagggccg cggtgacggc agcatcgagc
    11581 tgaagcctct ggaggtcggc cgcaacccgt ttagaccggg cgatatcgtg atcacttcgg
    11641 gcactggcgg gctctaccct ccgcttgtgc cgatcgcccg ggtgacgagg atttccggcg
    11701 acaatgcaat cgcgcttccg ctggccgatc ccggcgccgt cagcttcgcg atcgccgagc
    11761 gcgcctacga gccaaaggcg atggccccgc tgaccgacca cgccgaagag ctgcgctgat
    11821 ggtccgctcc gccctcgcct cgaagcagag gatcggccag gggccgaaag ccggcgccgc
    11881 ctacgtccct gccgcgtcgg tcgccatcgc gacgcttctc tcgagcctcc cgatcatctc
    11941 cgcgaacggc tggtatccgg acttcgcgtt cctgatgctg ataggctggc ggcttcgccg
    12001 ttccgacgtc tggccgagct ggtgggcggc tccgctcggg ctcctcaacg acctcgcgag
    12061 cggcgacccg cttggccttt ccgtgaccat ctggactgtg tcgatgctcg cccttgacct
    12121 tgtcgaccgg cgcaccatct ggcgcgacta ttggatcgaa tgggcgttcg cggcgctttt
    12181 gatcctgttt taccaggctg ctcagtggca ggtcgccgcc tggatgggag cgcgcgtacc
    12241 gttcgcgttc atgctcccgt cgatatcgat ctccatcgcc gccttccctg tcgcggcgtg
    12301 gctggttggc cgcgtagacc attggagact aggacaaaag tgaagcacca gcggttcact
    12361 tcggtacacc agtcgatttc gttctcgcgg cggatgatgg tgttcggcgg tgttcaggcg
    12421 gccgtcggcg cggtgctggt cggccgcctc ggctggctcg cggtcgctca gaacgaaaaa
    12481 taccagctga tgagcgagaa caaccgcgtc cagctgatcg tcgtcccgcc gcgccggggc
    12541 tggctagtcg accgcaaggg caagccgatc gcgatcaacc gaagcgactt tcgcgtcgac
    12601 atcatcccgc agcagctcga aaaccctgaa acgacgctca agctgctgtc caggctgctc
    12661 gagctcgacc gcgatgctct cgaccggatc ctcgaggagc tgaagggaag ccgcggctac
    12721 aagccgatcg aggtcgcggc cagcgttccc tacgagcaat atgccgccgt caccgtccac
    12781 ttgccggaac ttccgggagt gcagccgacc cgcggctttt cacgctacta tcccgacggc
    12841 ccagcggtcg cccacctggt cggctacgtc gggacggcct cggaaaagga atatgaagcg
    12901 gaaaacaacc cgctgctgat cacgcccggc ttcaagatcg gcaaggcagg gctggagaag
    12961 acgctcgagc cacagcttcg cggccagccc ggcggacagc gcgtggaggt caccgctcga
    13021 ggcaagctga tcaaggagct cgatcccaag cccgaccgaa gcggccaaac cgtgcaactg
    13081 accatagatt ccgagcttca ggccttcgcc gcgcgcagga tgggcgatga atcgggctcg
    13141 cttgtgctga tggactgcca caccggcgac atcctcgcct tcgtctcgat gccggcctac
    13201 gacccgaaca gcttttcgca gggcatcggc cgaacggagt ggcggatgct gtcggacgac
    13261 gaccacttgc cgcttctcaa caagatcacg cagggcctct acccgcccgg ctcgacgatc
    13321 aagccgatga acgcattagc gcttctccag cacggcatag acccgaccca gcggatccac
    13381 tgccctggcg gctaccagct cggcaaccgc ttctttcgct gcctcggccg ccatggatcg
    13441 gtcgacatgc ggcgggcgat cgccaagagc tgcaacacct atttctacgc gatgggccac
    13501 aaggtcggct acgacaagat cgcgccgatg gcgcggcggc tcggcctcgg cgcgaccttc
    13561 gatcttccgg ttgtgaccca gaattacggc accgttcccg acagcgcctg gcaggcccgg
    13621 aaattcaagc agaacaaaaa cctcgtcgaa cggcccgact ggaccgcctc agacacgctc
    13681 aacgcgtcga tcggccaggg cttcctcctc ctcaacccgc tccagcttgc ggtgatggcg
    13741 gcaaggattg cttcgggccg cgacgtccag ccgcagttgc tcggggtgca tgacacgccc
    13801 gcgccaatgc tgggactgcc gcccgagcat ctcgagatcg tccgtggcgg catgtggcag
    13861 gtcgtcaatg gggacggcac cgccggcgcc agccggcttc cgctcaaagg tatcgagatg
    13921 agcggcaaga cgggaaccgc gcaggttcgg cgaatcgctg gcggccagcg cggccagggc
    13981 ggcgactgga aatatcgcga ccatggcctg tacgtcttct tcgcgccttc ggataagccc
    14041 cgatatgccg gagcggtggt catcgagcac ggaatgggcg gtgccagggc cggagccccg
    14101 gtagccaagg acgtgctcac ttttctcttc gaccgccagc tggcgatgaa aaacctcacc
    14161 gcgctcgaag aacaatgggg cggcaccctg gccgagcgca acgagcggcg ggcagccgcg
    14221 ttcaaggctg ccgcccgggc acccagcgca tgatttcgtc cgccatcctt cctcaaccat
    14281 tggcgaggtt gccgtggcgg ctcttgttcc tgattgcggg gatcgcgacc atcggactgc
    14341 tcaccctcta ttcggcggcg ggcgggtcga tgcggccgtg ggcgctcaag caggcaatca
    14401 taatcggcgg cttcctggtg atcgccatcg ccatgtcgtg gacccgggaa tccaccatca
    14461 agcaggtcgc cttcccgctc tacgcggttg tgctcctgat gcttgttctc gtcgaaatgc
    14521 tcggtttcgt cggcaagggt gctcagcgct ggctcgacat cgggcctatc cgcttgcagc
    14581 caagcgagtt catgaagccg gcgatcgttc tggttctcgc gcgcttctac gatctcctgc
    14641 cgccgagcga catccgacgg cggcgggctg tgtggccggc agcgctcctg ctgggaattc
    14701 cagtcctgtt gatcctcgtg cagccggaca tgggcactgc gctgatggta cttttcatcg
    14761 gcgcgacggt catgttcgtc gccggcctcc cctggtggct gttcgccggc gcattcgctg
    14821 cagtcgcggt cgcggctccg atcgccttta cgatgatgca cgaatatcag cgcaagcgag
    14881 tcctcatttt cctcaatccg gagaacgatc cgctcggctc gggttatcac atcacccagt
    14941 cgaaaatcgc gatcggctcg ggcgggctgt tcggcaaggg ctatctccag ggaagccaga
    15001 gccatctgga ttatctgccg gaagggcata ccgatttcgt tttctccgcg atggtcgagg
    15061 aatggggctt cgtcggcggg ctcgtcctca tcctcgcgtt cgggctggtg atccgctggg
    15121 gaatgaaggt cagcgctcgg gcgcgaagcc gcttctcgca gctggccgca gccggcctga
    15181 cggcgaccgt cttctactac gtcgggatta acctgatgat ggtgatgggg ctcgcccccg
    15241 tcgtcggtgt cccgctgccg ctggtcagct tcggcggatc ggcggtgatg acgatcatgc
    15301 tgtcgatcgg gctccttatg gcgatcgagc ggcagcagcg cggcgcgccc gggctgtcga
    15361 cgactcgaat accggcttga agacacggcg gttgcgcctc atctgaggcc atgctaccgg
    15421 cgcgccgcgt ctcccgcgga ggcgcccctc aagatcgtgt ggacgcatag ctcagttggt
    15481 agagcagctg actcttaatc agcgggtcct aggttcgagc cctagtgcgt ccaccattct
    15541 tttccctttt tgaagacgtc gaatcg
//
LOCUS       DATAKH010000081         1769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36892,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000081 DATAKH010000000
VERSION     DATAKH010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36892"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VHN55_03335"
     CDS             complement(<1..436)
                     /locus_tag="VHN55_03335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803003.1"
                     /translation="MPRLAAVLLALLAVGSAFAEESLDAAQRAQRFSETIRPFFTPTA
                     TDRATLSPDGKHVAYTLHHGDTAYVMMINVDDPGVKIPIAVSEDREGPAFARNKIRGR
                     VVFLDWAAGRRLVFSSDLGEIFAIDADGRNLKKFADLEDLSVF"
     gene            complement(543..>1769)
                     /locus_tag="VHN55_03340"
     CDS             complement(543..>1769)
                     /locus_tag="VHN55_03340"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX2803004.1"
                     /translation="YPATVEFRNPLISHIPHATDEQLKKVLSLIAEAKKPVLYVGGGM
                     ISAEAHAELKEFAEKTNINVATTLMGVGCFPETHPLSMQWFGMHGAAYGNWAVDQCDL
                     LLCFGARFDDRITGAVDKFAAGARIVHLDIDASEHNKNKKGVLLPIQSDVKFALRRMN
                     ELIAAHKFTAPDTKAWHAQIAQWKKEHPFDNKAGFGNSPHILPQEAVAALYELTKGDA
                     IITTGVGQHQMWAAQFYRFDKPRRYISSLGLGAMGYGYPAAMGAKVACPDKQVIDIDG
                     DGSFVMNIQELATCHIEKIAAKAMILNNQHLGMVVQWEDRFYGSVRGNTILGDESNVG
                     GPDNLGGLYPDFVKIAEGFGVKGRRVHKKSELKAAIQEMLDCDGPFVLDVIVPYTEHV
                     LPMIPAGKTVKEMILK"
BASE COUNT          303 a          522 c          592 g          352 t
ORIGIN      
        1 caaacaccga gagatcctcg aggtcggcaa atttcttgag attcctgccg tcggcatcga
       61 tcgcgaaaat ttcgccgagg tccgacgaga aaaccaggcg ccggcccgcc gcccaatcga
      121 ggaagaccac gcggccgcga atcttgttgc gggcgaaggc cgggccttcg cgatcttcgc
      181 tcacggcaat cggaatttta acaccgggat cgtcgacgtt gatcatcatc acgtacgcgg
      241 tgtcgccgtg atgcagggtg taagcgacgt gtttcccgtc gggcgagagc gtggcgcggt
      301 ccgtcgcggt cggcgtgaaa aacggccgga tggtttcgga gaaacgctgg gcgcgctggg
      361 ccgcatccag gctttcctcc gcaaaagccg aaccgactgc gagcagcgca agcaggacgg
      421 cggccaggcg gggcatggga aaatcagagg agatcgcacg ggcgacgcga tgcttttcct
      481 cccgctccag gcacaaaaaa gcccggggca gttggcccgg gcttttgcag agtcgaagtg
      541 gcctacttca ggatcatttc cttcaccgtc ttgccggccg ggatcatcgg cagcacgtgt
      601 tcggtgtagg ggacgatcac gtcgaggacg aacgggccgt cgcaatcgag catttcctgg
      661 atggcggcct tgagctcgct tttcttgtgc acgcgccggc ccttgacgcc gaagccctcg
      721 gcaatcttga cgaagtcggg atagaggccg ccgaggttgt cggggccgcc gacattcgat
      781 tcgtcgccga ggatcgtgtt gccgcggacg ctgccgtaga agcggtcttc ccactgcacg
      841 accatgccga ggtgctggtt gttcaggatc atcgcctttg cggcgatctt ctcgatgtgg
      901 caggtggcga gctcctggat gttcatcacg aaggacccgt cgccgtcgat gtcgatgacc
      961 tgcttgtcgg ggcaggcgac cttcgcgccc atggccgcgg ggtaaccgta gcccatcgcg
     1021 ccgagtccga gggagctgat gtagcggcgg ggtttgtcga aacgatagaa ctgcgcggcc
     1081 cacatctggt gctggccgac gccggtcgtg atgatcgcat cgcccttggt gagttcgtag
     1141 agcgcggcca cggcttcctg cggaagaatg tgcgggctgt tgccgaagcc ggccttgttg
     1201 tcgaacgggt gctctttctt ccactgcgcg atctgcgcgt gccacgcctt cgtgtcgggc
     1261 gccgtgaact tgtgcgcggc gatgagctcg ttcatccggc gcagcgcgaa tttcacgtcg
     1321 ctctggatcg ggaggagaac gcccttcttg ttcttgttgt gctccgaggc gtcgatgtcg
     1381 aggtggacga tccgcgcgcc cgccgcgaat ttatcgacgg cgccggtgat gcggtcatcg
     1441 aatcgcgcac cgaagcagag cagcaggtcg cactggtcga ccgcccagtt gccgtaggcg
     1501 gcgccgtgca tgccgaacca ctgcatcgag agcggatgcg tttcggggaa gcagcccacg
     1561 cccatgaggg tggtggcgac gttgatgttc gtcttctcgg caaactcctt cagctcggca
     1621 tgggcctcgg ccgaaatcat tccgccgccg acgtagagca ccggtttctt tgcctcggcg
     1681 atgagcgaga gaactttttt caactgctca tccgtcgcgt gcgggatgtg gctgatgagc
     1741 ggattgcgga actcgaccgt cgcgggata
//
LOCUS       DATAKH010000082         4055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_17122,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000082 DATAKH010000000
VERSION     DATAKH010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4055
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17122"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..879)
                     /gene="fabG"
                     /locus_tag="VHN55_03345"
     CDS             complement(139..879)
                     /gene="fabG"
                     /locus_tag="VHN55_03345"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004212094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEX2803005.1"
                     /translation="MFDLSGMTALVTGASGGLGSSIAKALAGQGARLAVSGSNVEKLE
                     RFRDELGGDHVALPCNLSDGEAVDGLVPSAVEALGGKLDILVNNAGVTRDNLLMRMKD
                     EEFEEVIRINLEAAFRLIRAAAKPMMKARFGRIISITSVVGVTGNPGQANYVASKAGL
                     IGLTKSVAQELASRGVTANCIAPGFMTSAMTDALNDQQRDGILSRIPMGQMGSGEDIG
                     AACVFLASREAGYVTGQTLHVNGGMAMP"
     gene            complement(879..1817)
                     /gene="fabD"
                     /locus_tag="VHN55_03350"
     CDS             complement(879..1817)
                     /gene="fabD"
                     /locus_tag="VHN55_03350"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004212090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEX2803006.1"
                     /translation="MRAFLFPGQGSQAVGMGAALSEASSAARDVFAEVDEALGQNLFR
                     LMKEGPEDELKLTENAQPAIMAHSMAVFAALTREGGVDLAKAAQFVAGHSLGEYSALC
                     AAGSFDLPTTAKLLKLRGQAMQAAVPVGQGAMCALLGADLAMARRIAEAAAQGEVCAV
                     ANDNDPSQVVLSGNKGAIDRAVEMAKEMGAKRAVPLPVSAPFHCPLMQPAAEAMSDAL
                     SYTVVEAPAVPVLANVTAKAESDPDTIRSLLVDQVTGMVRWRESVANMAEAGVEEFVE
                     LGGKVLGAMVKRIAPDAKVTSVVTIDDIEALAKEIA"
     gene            1899..3200
                     /locus_tag="VHN55_03355"
     CDS             1899..3200
                     /locus_tag="VHN55_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX2803007.1"
                     /translation="MDSKARLLGPWMTTALVIGNIIGAGIFLLPATLAPLGQNAIYGW
                     LLTIAGALCLAWVFAQLAAKLGGGPYAYVHEAAGELPAFMVMWSYWISIWAGLPVLAI
                     AAVSYASSIFPAIGGSAAPFAAIAAVWLLALVNMRGARAAGAVQLVTTLLKLLPLIAV
                     VLVATFLFERGDDAAALAPTPVSAGAIATAGTLALFSMLGVESASVAAAKVANPARVI
                     PRATMAGTALVGIVYLAACTAVLFLLPGATAAASPAPFADAIAPALGAAAGTLIAAFA
                     VISALGCLNGWILCSGEVPLALARDGVFPRWLAATTAIGTPVRAQFVSCVLATLLIAS
                     NYSRSMADLFAFMLLVTTTVTLVLYFACAASALVLMARRRVRAPLLGAAAVLSLAFAI
                     WAVWGAGAEAASWGLALLATGVPVYYLMRWKGSSTPAAEAS"
     gene            complement(3154..>4055)
                     /locus_tag="VHN55_03360"
     CDS             complement(3154..>4055)
                     /locus_tag="VHN55_03360"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX2803008.1"
                     /translation="VDGEEGCAKVLTCPYHAWSYGRDGRLVGVPHRGEYPGLDVEAHG
                     LVPVALENWRGFLFVTLEPGAPSVAEMMAPYEDEVEPYRFEELRAIGRVTLRPRPLNW
                     KTIADNYSDHLHIPVGHPGLTRLFGRNYRIEAKEWVDRMEGELVEAPSANPSERAYQK
                     FLPAVEHLPASHRRKWLYYKLFPNVAFDIYPDQVDFMQFLPVSSTETVIREISYALPD
                     ERREMKAARYLNWRINRRVNAEDTELITRVQKGMESASYAPGPLGTSEVCLRSFAQKL
                     RRLVPEARLSSPPPRGWSCLSSA"
BASE COUNT          600 a         1480 c         1250 g          725 t
ORIGIN      
        1 ataactttcg ccataacttc cctctctcag tcccctgttc cggcccttcg acaagcagcc
       61 ggaaaccctt cgtatctgcg agggatatag gtgtgctcgg cgggccaaca agggccgcgg
      121 caacggagcg ttaaccgctc aaggcatcgc cattccgccg tttacgtgca gagtctggcc
      181 ggtgacgtag ccggcctcgc ggctcgccag gaaaacgcag gcggcgccga tatcctcgcc
      241 gctgcccatc tgtcccatgg gaattcgcga caggatgccg tcgcgctgct ggtcgttgag
      301 ggcgtcggtc atcgccgagg tcatgaagcc cggtgcgatg cagttggcgg tgactccgcg
      361 gctggcgagc tcctgggcaa ccgacttggt caggccgatc agcccggcct tcgaagccac
      421 gtaattcgcc tgccccgggt tgcccgtcac tccgacgacc gaggtgatgg agattatccg
      481 cccgaagcgc gccttcatca tcggcttggc cgccgctcgg atcagccgga acgctgcctc
      541 gaggttgatc cgtatgacct cctcgaattc ctcgtccttc attcgcatca ggaggttgtc
      601 gcgggtgacc ccggcattat tgacgaggat gtcgagcttg ccgccaagcg cctccaccgc
      661 cgacggaacg aggccatcca ccgcctcccc gtccgacagg ttgcacggca aggcgacatg
      721 atcgccgcca agctcgtcgc ggaagcgctc gagcttctcg acattgctgc cggagaccgc
      781 cagacgcgcc ccctgccccg ccagcgcctt cgcaatcgaa gaccccagcc cgcccgaagc
      841 gccggtcacg agagcagtca ttcccgagag gtcgaacatc acgcgatctc cttcgccagc
      901 gcttcgatat cgtcgatcgt cactacgctc gtcaccttcg cgtcgggcgc aatgcgcttg
      961 accattgccc caagcacctt cccgccgagc tcgacgaact cctccactcc cgcttccgcc
     1021 atgttcgcga cgctttcgcg ccagcggacc attccggtca cctggtcgac cagaaggctc
     1081 cggatcgtgt cggggtcgct ctccgccttt gcggtgacgt tcgcaagaac aggcacagcc
     1141 ggagcttcga cgaccgtgta gctcagcgca tcgctcattg cctcggccgc cggttgcatc
     1201 agcgggcagt ggaacggcgc cgataccggc agcggcaccg cccgcttcgc gcccatctct
     1261 ttcgccatct cgaccgcgcg atcgatcgcg cccttattcc cggacagcac cacctgagac
     1321 gggtcattgt cgttggcgac ggcgcacacc tcgccttgcg ccgccgcttc cgcaatccgc
     1381 cgcgccatcg ccaggtcggc gccaagcagc gcgcacatcg ccccctgccc caccggcacc
     1441 gccgcctgca tcgcctgccc gcgaagcttc aggagcttgg ctgtcgtcgg caggtcgaac
     1501 gaccccgcag cgcacagcgc cgaatattcg ccgagcgagt gtcccgcgac gaactgcgcc
     1561 gccttggcca ggtcgactcc gccctccctc gtcagcgccg cgaacaccgc catcgaatgg
     1621 gccatgatcg ccggctgcgc attctcggtg agcttgagct cgtcctcggg cccctctttc
     1681 atcaaccgga acaaattctg gccaagcgcc tcgtcgactt cggcgaagac atcgcgggcg
     1741 gccgagctcg cctctgacaa ggcggcgccc atgccgactg cctgactgcc ctgccccgga
     1801 aaaaggaatg cgcgcatcat cgcccctgtt ggtctatcaa tcgcggcggc gactaggccg
     1861 gggcgggccg attgccaagg gttcgggggg aaacgggcat ggacagcaag gcgcggctgc
     1921 ttgggccgtg gatgaccact gcgctggtca tcggcaacat cataggcgcg ggcattttcc
     1981 ttctccccgc taccctcgct ccattgggcc agaacgcaat ctacggatgg ttgctgacga
     2041 tcgccggcgc cctgtgcctc gcctgggtct tcgcgcagct ggcggcgaag cttggcggcg
     2101 gcccctacgc ctatgtccac gaggcggccg gcgagctgcc ggctttcatg gtcatgtgga
     2161 gctactggat ctcaatctgg gcgggacttc cagtgctcgc gatcgccgcc gtcagctacg
     2221 ccagcagcat cttccccgca atcggaggct cagccgcacc gttcgcggcg atcgcagcgg
     2281 tctggcttct tgccctcgtg aacatgcgcg gcgcgcgggc ggccggggcc gtgcaactgg
     2341 tcaccaccct cttgaagctg ctcccgctga ttgcggtcgt gctcgtcgcg acgttcctgt
     2401 tcgagcgcgg ggacgacgcg gcagcgctcg cgccgactcc ggtcagcgcc ggcgcgatcg
     2461 cgaccgccgg caccctcgct ttgttctcga tgctgggcgt cgaatccgca tctgtcgcgg
     2521 cggccaaggt cgccaatccg gcccgagtca tcccacgggc gacaatggcc ggcacggcgc
     2581 tggtcggcat cgtttacctc gccgcctgca ccgcggtcct gttcctcctc cccggcgcga
     2641 ccgcggccgc ttcgcccgcg ccgttcgccg acgcgattgc ccccgcgctc ggcgccgcag
     2701 ccggaacgct catcgccgcc ttcgccgtga tcagcgcgct cggttgcctc aacggctgga
     2761 tcctgtgctc cggcgaagtc ccgctggcgc tcgcccgcga cggcgtgttc ccgcgctggc
     2821 tggcggcgac gaccgcgatc ggcacgcccg ttcgcgccca gttcgtgtcc tgcgttctcg
     2881 cgacgctgct gatcgcaagc aactacagcc gctcgatggc cgacctgttc gcgttcatgc
     2941 tgcttgtgac gaccacggtc acgctggtgc tctatttcgc ctgcgcggcc tcggcgctgg
     3001 tgctgatggc gcggcggcga gtccgcgcgc ccttgctcgg tgcggcggcc gtgctctcgc
     3061 tggcctttgc catttgggcc gtatggggcg ctggggcgga agctgcgtcg tggggccttg
     3121 cgctgctcgc gactggggtc ccggtctatt acctcatgcg ctggaaaggc agctccaccc
     3181 ccgcggcgga ggcgagctga gccgcgcctc aggcaccaac cgcctgagct tctgcgcgaa
     3241 gctgcgcaaa cacacctcgc tcgtcccaag cggccccggg gcatagctcg cgctttccat
     3301 gcccttctgg acccgcgtga tcagctcggt gtcttcggcg ttgacccgcc ggttgatccg
     3361 ccagttgagg tagcgcgccg ccttcatctc gcgccgctcg tcgggcagcg cgtagctgat
     3421 ctcgcggatc accgtctcgg tcgagctgac gggaaggaac tgcatgaaat cgacctggtc
     3481 cgggtagatg tcgaacgcca cgttggggaa cagcttgtaa tagagccact tgcgccggtg
     3541 cgaggccggc aggtgctcca ccgccggcag gaacttctgg tacgcccgct ccgacgggtt
     3601 ggccgaaggc gcctcgacca gctcaccctc catgcggtcg acccattcct tcgcctcgat
     3661 ccggtaattg cgcccgaaca gccgggtcag ccccggatgg ccgaccggga tgtggagatg
     3721 gtcggaataa ttgtcggcga tggtcttcca gttgagcggc cgcggccgca gagttactcg
     3781 tccgatcgcc cgaagctcct cgaaccgata gggctccacc tcgtcctcat aaggcgccat
     3841 catctcggca acgcttggcg ctccaggctc gagggtcacg aacaggaagc cgcgccaatt
     3901 ctccagcgcc accggcacca gcccgtgcgc ctcgacgtcg agcccgggat attcgccgcg
     3961 gtgcggcacc ccgaccagcc gcccgtcgcg cccatagctc cacgcgtgat aggggcaggt
     4021 cagcaccttc gcgcagccct cctcgccgtc gacca
//
LOCUS       DATAKH010000083         6169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_9555,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000083 DATAKH010000000
VERSION     DATAKH010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6169
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9555"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2315)
                     /gene="metH"
                     /locus_tag="VHN55_03365"
     CDS             complement(<1..2315)
                     /gene="metH"
                     /locus_tag="VHN55_03365"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEX2803009.1"
                     /translation="MADPDFSAAGAGARFVNVGERTNVTGSARFKKLILAGDYDAAVE
                     VARQQVENGAQIIDVNVDEALLDSEAAMTTFLKRIAAEPDIARVPVMIDSSKWSVIEA
                     GLKCVSGKPIVNSISMKEGEGPFLELARKCRAYGAAVVVMAFDEVGQADTKKRKVEIC
                     ERAYKLLVDDGTEPEDIIFDPNIFAVATGIEEHRRYALDFIEATREIRSRCAGVHISG
                     GLSNLSFSFRGNEPVRRAMHSIFLYHAIPAGMDMGIVNAGQLDVYDTIDPELREACED
                     VILDRRDDATERLVDLAEKYKGSDAATEKAAAEWRSLPVGERLSYALVKGIDAHIIED
                     TEEARQGAERPIHVIEGPLMDGMNVVGDLFGSGKMFLPQVVKSARVMKKAVAHLIPFI
                     EAEKEKSGATQGKGKVVMATVKGDVHDIGKNIVGVVLQCNGFEVIDLGVMVPWQDILK
                     AANDNNADMIGLSGLITPSLDEMVTVAGEMQRLGLATPLLIGGATTSKAHTALRIDPA
                     YEGPVIHVLDASRAVGVASSLVSDTQREPLLATTADDYDKLRKARERSGHSQLATLEE
                     ARANAFPYDPSGQAPPPAMPGLHHIGEWPLRDLKASIDWTPFFRAWELAGNYPAILDD
                     PVVGESATNLFKDAQAMLDQIIAERWVTPKATVGLWRCRREGDDILVLAGNDWTRLPM
                     LRQQVKKREGRPNMCLADFINPEGEDWLGGFAVGIHGLSAHLARFKAENDDYSDILLK
                     ALADRLAEAFAERLHGHVRESVWGYAGTEHLT"
     gene            complement(2333..3367)
                     /locus_tag="VHN55_03370"
     CDS             complement(2333..3367)
                     /locus_tag="VHN55_03370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010216201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEX2803010.1"
                     /translation="MSGAAEFRAEAASRILIKDGAYGTLIQAEKLSAEAYCAGLDLKK
                     DQKGNNDLLNLTQPDVVRSICRRFAEAGADVLATNTFNANRISQSDYGAEALVPEINR
                     AAARMTREVADRDGCKRWVAGAIGPTNKTLSLSPDVNDPAYREVDFDTVKAVYREQVD
                     ALVEGGVDFILVETVFDTLNAKAAIMATLEAEQAMGRELPLMISMTLTDLSGRNLSGH
                     TVEAFWASVRHSKPLTIGLNCSFGAAQLRPHLASLAAAADTLVMAYPNAGLPNDLGEY
                     DEAAAETAAQVAEWVRDGLVNVVGGCCGTTPAHIAAIAEVAKGKPPRKIPQPRHQTLL
                     AGLEPMVIAA"
     gene            complement(3364..4269)
                     /gene="metF"
                     /locus_tag="VHN55_03375"
     CDS             complement(3364..4269)
                     /gene="metF"
                     /locus_tag="VHN55_03375"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEX2803011.1"
                     /translation="MNGEPLEQLRHHEPLFAKTRGDIAVSFEFFPPKTEKMADTLWQS
                     IQTLAPLNPRFVSVTYGAGGSTRERTHATVKRILEETPLTPAAHLTCVGASKGEVNDI
                     AREYWELGVRNIVALRGDPPEPGGRYRPHPEGYRDAAELVAGLKTVAPFDISVAAYPE
                     IHPDSSSRRFDLDNLKRKVDAGADRAITQFFFSADCFFRFRDEAAAAGIDIEIVPGIL
                     PVSNVATTRRFAQSCGASIPDWLDQLFERLDDLPAARQLIAATVAAELCGQLYAGGVR
                     CLHFYTLNRAELSYAICHLLGVRPK"
     gene            complement(4266..5246)
                     /locus_tag="VHN55_03380"
     CDS             complement(4266..5246)
                     /locus_tag="VHN55_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX2803012.1"
                     /translation="MDTLPLAELFQSVSDSTRLRILVLLARMELSVGELAQLLDQSQP
                     RVSRHVRILAEAGIVERRKEGSWVFLALADPDRTGPLLKLVEAWTDPRSEAVLEEDSA
                     RLAAVRADRAEAAERYFASHAQVWDSIRSLHVAEAEVERAVGRALGSEGFGTLVDVGT
                     GTGRMIELFGSRAREAIGIDRSSDMLRLARAKLESAGVASSLRQGDMYALPLQNGSAD
                     CVIIHQVLHYAHAPADAIAEAGRVLGPGGTLLVVDFAAHEREELRTRDAHLRLGFADE
                     VMDGWFGAAGLAMDHVEHLEGGELTVTIWRGVKRVASGAEGTNVRRPRAA"
     gene            5455..5709
                     /locus_tag="VHN55_03385"
     CDS             5455..5709
                     /locus_tag="VHN55_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circumsporozoite protein"
                     /protein_id="HEX2803013.1"
                     /translation="MKKVAVTVTVLALGLAACANNTDANNDMATNDMYTENAADADMN
                     AAMSDTENAADNALDTAGNAIDNAQEAVENAGEAVENAAE"
     gene            5722..5949
                     /locus_tag="VHN55_03390"
     CDS             5722..5949
                     /locus_tag="VHN55_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803014.1"
                     /translation="MNKGRMPLLACGPFLLALLASACSDGTSPSAEENRQLDNAAEML
                     DSAPDTLANIDENALNSLEGASENVSTEGQR"
     gene            complement(5930..>6169)
                     /locus_tag="VHN55_03395"
     CDS             complement(5930..>6169)
                     /locus_tag="VHN55_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803015.1"
                     /translation="KKNPPCMPPGLAKQQFALGQRVPLGYNGLLGYNSVPYDLRNHYG
                     AQLDPRSRYIYDQNYLYRVDPQTMMVQQILNAVLR"
BASE COUNT         1076 a         2011 c         1987 g         1095 t
ORIGIN      
        1 gtcagatgct cggtgccggc atagccccag accgactcgc ggacatggcc gtgcagccgc
       61 tcggcgaagg cttcggcaag ccggtcggca agcgctttga gcaggatgtc ggaataatcg
      121 tcgttctccg ccttgaaccg cgccagatgg gcggagaggc cgtgaatccc gaccgcgaac
      181 ccgccgagcc agtcctcgcc ttccgggttg atgaagtcgg ctaggcacat gttcgggcgg
      241 ccttcgcgct tcttcacctg ctggcggagc atcggcagcc gggtccagtc gttgccggcc
      301 aggacgagga tatcgtcgcc ctcgcgcctg caacgccaca ggccgacggt ggccttggga
      361 gtcacccagc gctcggcgat gatctggtcg agcatcgcct gagcatcctt gaacaggttg
      421 gtggcgctct cgcccaccac cgggtcgtcg aggatcgccg gataattgcc ggcaagttcc
      481 cacgcgcgga agaacggagt ccagtcgatc gacgctttca agtccctaag cggccactcg
      541 ccgatgtgat gaagtccagg catcgccggc ggaggcgcct gtcccgacgg atcgtagggg
      601 aaagcgttcg ctctcgcctc ctcgagagtc gccagctggc tgtggccgct ccgctcccgc
      661 gctttgcgga gcttgtcata atcatcggcg gtcgtcgcga gcagcggctc gcgctgggtg
      721 tcggacacca gcgaggaggc gactccgacc gcgcggctgg cgtcgaggac gtggatcacc
      781 gggccttcgt aggcgggatc gatccgaagc gccgtgtgcg ccttgctggt tgtcgccccg
      841 ccgatcagga gcggagtggc cagtcccaag cgctgcatct cgccggcgac cgtgaccatt
      901 tcgtcgagcg aaggcgtgat cagccccgaa agcccgatca tgtcggcatt gttgtcgttg
      961 gcggccttca ggatgtcctg ccacggcacc atgactccaa ggtcgatcac ttcgaagccg
     1021 ttgcactgca ggaccacgcc gacgatgttc ttgccgatgt cgtgaacgtc gcccttgacg
     1081 gtcgccatca caaccttgcc cttgccctgg gtcgctccgg acttttcctt ctccgcctcg
     1141 atgaacggga tcaggtgggc gacggccttc ttcatcaccc gcgccgactt gacgacctgg
     1201 gggaggaaca tcttgcccga accgaacagg tcgccgacga cgttcatccc gtccatcagc
     1261 ggcccctcga ttacgtggat cggccgctcg gcgccttggc gcgcctcctc ggtatcctcg
     1321 attatgtggg cgtcgatgcc cttcaccagc gcataggaca gccgctcgcc gacgggcaga
     1381 gaacgccatt ccgccgccgc cttctcggtt gcggcgtcgc tgcccttata cttctcggcc
     1441 aagtccacga gccgctcggt ggcgtcgtcg cgccggtcga ggatcacatc ctcgcaggct
     1501 tcgcgaagct cggggtcgat cgtgtcgtaa acgtcgagct ggccggcatt gacgatgccc
     1561 atgtccatcc cggcggggat cgcatgatag aggaagatgc tgtgcatcgc ccggcgcacc
     1621 ggctcgttgc cgcggaacga gaagctgagg ttcgataggc caccggaaat atggacaccg
     1681 gcacagcgag agcggatttc gcgcgtcgcc tcgataaagt cgagcgcgta acggcgatgc
     1741 tcctcgatcc ccgtagcgac ggcgaagata ttgggatcga agatgatgtc ctcgggctcc
     1801 gtgccatcgt cgacgagcag cttgtaggcg cgctcgcaga tctcgacctt gcgcttcttc
     1861 gtgtcagcct ggccgacctc gtcgaaggcc atcacgacga ccgcggcgcc ataagcccgg
     1921 cacttgcgcg cgagctcgag gaacggcccc tcgccctcct tcatgctgat cgaattgacg
     1981 atgggcttgc ccgacacgca tttgaggccc gcttcgatca cgctccactt ggagctgtcg
     2041 atcatcaccg gcactcgagc aatgtcgggc tcggcggcga tgcgcttgag gaaggtggtc
     2101 atcgccgctt ctgaatcgag caaggcctcg tcgacgttga cgtcgataat ctgtgccccg
     2161 ttctcgacct gctggcgcgc gacctcgacg gcggcgtcgt agtcgccggc gaggatcagc
     2221 ttcttgaacc tggccgaacc ggtgacgttg gtccgctcgc ccacgttgac gaagcgggcg
     2281 ccggctcctg ccgcgctgaa atccggatcg gcgatgacct cggcggcttc gttcacgcgg
     2341 caatcaccat gggctcgagg ccggcgagca gcgtctggtg gcgcggttgt ggaatcttcc
     2401 gcggcggctt gcccttggcg acttcggcga ttgcggcgat atgcgccgga gtggtcccgc
     2461 aacagccgcc gacgacgttg accaggccgt cgcggaccca ttcggcaacc tgcgcggcag
     2521 tctccgctgc cgcttcgtca tattcaccga ggtcgttcgg aaggccggcg ttcggataag
     2581 ccatgaccag cgtgtcggca gctgcggcaa gcgacgcgag atgcggccgc agctgtgccg
     2641 ctccgaacga gcagttgagg ccgatggtca gcggcttgga atggcgaacc gatgcccaga
     2701 acgcttcgac ggtatgaccg gacagattgc ggcccgacag gtcggtgagc gtcatagaaa
     2761 tcatcagcgg aagctcgcgc cccatcgcct gctccgcctc aagcgtcgcc atgatagctg
     2821 ccttggcgtt gagcgtgtcg aacacggttt cgaccaggat gaaatccact cctccctcga
     2881 cgagcgcgtc cacctgctcg cgatagactg ccttcaccgt gtcgaagtcg acttcgcgat
     2941 aggcgggatc gttgacgtcg ggcgacaacg acagcgtctt gttggtcgga ccaatcgcac
     3001 ctgcgaccca gcgcttgcag ccgtcgcggt cggcgacctc gcgagtcatg cgcgccgcgg
     3061 cgcggttgat ttccggaacc agcgcttcgg ctccatagtc ggactggctg attcggttcg
     3121 cattgaacgt gtttgtggcc aacacgtcag ctcccgcctc cgcgaagcgc cggcagatcg
     3181 agcgaactac gtccggctgg gtcaagttga gaaggtcgtt gttgcccttc tggtcctttt
     3241 tcaggtcgag cccggcgcaa taggcctcgg cggagagctt ctcggcctgg ataagcgttc
     3301 cgtaggcgcc gtccttgatc aggatccgac tggccgcttc ggcccggaat tccgcagcgc
     3361 cgctcatttc ggccgcactc caagcaaatg acagatcgcg tagctgagct cggcgcgatt
     3421 gagcgtgtag aagtggaggc agcggactcc cccggcgtag agctggccgc acaattcagc
     3481 ggcgacggtg gcggcgatca gctgccgggc cgccggcaga tcgtcgagac gctcgaacag
     3541 ctggtccagc cagtcgggta tcgacgctcc gcagctctgc gcaaagcgac gcgtcgtcgc
     3601 cacgttcgat accggcagga ttcccgggac gatctcgatg tcgatccccg cagccgcggc
     3661 ttcgtcgcgg aagcggaaaa aacagtccgc ggaaaagaag aattgcgtaa tcgcccggtc
     3721 cgcacccgca tcgaccttgc gcttcaaatt gtcgaggtcg aaccggcgcg acgaagaatc
     3781 gggatgaatc tcgggatagg cggcgacgga aatgtcgaac ggagcgaccg tcttgaggcc
     3841 ggccacgagc tcggccgcgt cgcgatagcc ttccgggtgc ggccggtacc tgcccccggg
     3901 ctcgggcgga tcgccgcgaa gggcgacgat gttgcgaacc cccagctccc aatattcgcg
     3961 ggcgatgtcg ttcacttcgc ccttgctcgc accgacgcag gtcaggtgtg cggcgggagt
     4021 aagaggcgtc tcctccagga ttcgcttgac cgtcgcgtgg gtccgttccc tggtcgagcc
     4081 gccggcgcca tacgtcaccg agacgaacct ggggttgagc ggcgccagcg tctggatcga
     4141 ctgccacagc gtgtccgcca tcttctccgt cttcggcgga aagaattcga agctgacggc
     4201 gatgtcgcca cgggtctttg cgaatagcgg ctcgtgatgt ctcagctgct cgagcggttc
     4261 gccgttcatg ctgccctcgg ccttcggacg ttagtccctt cggcaccgct tgcgacccgc
     4321 ttcacaccgc gccagatagt aacggtgagc tctccgcctt cgagatgctc gacatgatcc
     4381 atcgcaaggc cggcggcgcc gaaccagccg tccatcactt cgtcggcaaa gcccaggcgc
     4441 aggtgcgcat cgcgggttcg aagctcttcc cgctcatgcg cggcaaagtc cacgaccagc
     4501 aaggtcccgc ccggcccgag gacccgaccg gcctcggcaa tggcatcggc cggcgcgtgg
     4561 gcataatgga gcacctggtg gatgatgacg cagtcggcgc tgccgttctg cagcggcagc
     4621 gcgtacatgt cgccctggcg aaggctggaa gctaccccgg ccgattccag cttggcgcgg
     4681 gcgagccgga gcatatcgga agagcggtcg atcccaatgg cttcccgggc gcgcgacccg
     4741 aacagctcga tcatccggcc ggtgcccgtg ccgacatcga cgagcgtccc gaagccctcg
     4801 cttccgagcg cgcggccgac ggcccgctcg acctcggctt cggcgacatg gagcgagcgg
     4861 atcgaatccc acacctgggc atgcgaagcg aaatagcgct cggcggcctc ggcccggtcg
     4921 gcgcggaccg ctgcgagcct cgccgaatcc tcttccagaa cagcctcgct ccgtgggtcg
     4981 gtccaggctt cgaccagctt cagtaggggg ccggtcctgt ccggatcggc aagcgccagg
     5041 aagacccagc ttccttcctt gcgtcgctcg acgatccccg cctcggcgag gattcggacg
     5101 tgcctcgata cgcgcggctg gctctggtcg agcagctgcg cgagctcgcc gaccgaaagc
     5161 tccatccgcg ccagaaggac gaggattctc aggcgcgttg agtccgacac ggactggaac
     5221 aattcggcga gcggaagcgt atccatctgc gtcgagggca tataaaggat tctttatatg
     5281 gtcaacgcga agacgcggcc cgtggcgccc ggcggccagc ggcgcgcagg acagtccgcg
     5341 cgaacatttg cgcgaccgtc ccagcgtctg taatgccccg cgctggcctg cacgattcgc
     5401 gtgccaggcc gagcccacgg cccaacaggg gctaattgag ggagtggaac gatcatgaag
     5461 aaagttgcag tgaccgtcac ggtcctcgcg ctcggccttg ccgcgtgcgc gaacaacacc
     5521 gacgccaaca acgacatggc gacgaacgac atgtacaccg agaatgcggc cgacgccgac
     5581 atgaacgctg cgatgagcga caccgagaat gccgccgaca acgcgctcga caccgccggc
     5641 aacgcgatcg acaacgctca ggaagcggtc gagaacgcgg gcgaggccgt cgagaacgcc
     5701 gccgagtaag gccgttcgga catgaacaag ggccgcatgc ctctattggc atgcggccct
     5761 tttttattgg cgctcctggc aagtgcctgc agcgacggga cgagcccctc cgccgaggag
     5821 aaccgtcaac tggataacgc tgccgagatg ctcgattccg ctcctgacac gcttgcgaac
     5881 atcgacgaaa acgccctcaa ttccctagag ggcgcttccg agaacgtctc taccgaagga
     5941 cagcgttgag gatctgctgc accatcatgg tctgcggatc gacccgatag agatagttct
     6001 ggtcgtagat gtagcgtgag cgggggtcga gctgcgcgcc gtaatgattg cgcaggtcgt
     6061 aaggcaccga attgtagccg agcagcccgt tgtacccgag cggaacgcgc tggccgagcg
     6121 cgaattgctg ctttgcaagg ccgggtggca tgcaaggcgg gttcttctt
//
LOCUS       DATAKH010000084         2855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36922,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000084 DATAKH010000000
VERSION     DATAKH010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36922"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1145
                     /locus_tag="VHN55_03400"
     CDS             <1..1145
                     /locus_tag="VHN55_03400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010408655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2803016.1"
                     /translation="SGDRWRPVPLIDELKTRAREAGLWNLFMPPAPAVPQVDDSFIFE
                     GEQLTNLEYALCAEEMGRIPWASEVFNCSAPDTGNMEVLHRYGKREQKEQWLAPLMRG
                     EIRSAFLMTEPGVASSDATNIECSIRRDGEEYVINGRKWWSSGAGDPRCKIAILMGKT
                     DPDAPAHKQQSMILVPMDAAGITVERALTVYGYDDAPHGHMEIALDDVRVHASNLLLG
                     EGRGFEIAQGRLGPGRIHHCMRAIGAAEEALKLMCERLQSRVAFGKRISEHSIWEQRI
                     ADARIEIEATRLLCLKAAGMMDRAGNKAAKAEVAMIKVKAPAMALKVIDDAVQAFGGA
                     GVSQDTPLAMSWAHIRTLRLADGPDEVHNRAIAKIEFERHRPRDSN"
     gene            1145..1903
                     /locus_tag="VHN55_03405"
     CDS             1145..1903
                     /locus_tag="VHN55_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2803017.1"
                     /translation="MAVLDHKVAIVTGAASGIGKAAAELFRSEGATVVAADRTDGKGI
                     TSLDAGSEAEVETLVEKTVADLGGIDIVFANAGVSGGMAGIFEQSSADWQEILQVNLI
                     GPFLLIKYAAPHMKERGGGSIVCTASVAGLRSGAGGPAYSASKAGLINLVKVAATQLA
                     GSNVRVNAICPGLIETGMTRDIYEWARSAGKESRIGRLNPMRRGGEPDEIASVALFLA
                     SDAASYVNGQAIAVDGGLSASHPFSQQEYGRTSA"
     gene            1919..>2855
                     /locus_tag="VHN55_03410"
     CDS             1919..>2855
                     /locus_tag="VHN55_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010187308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX2803018.1"
                     /translation="MPNPISTRHHGDVLIVESNNPPVNALSAPVRQGLVDAIEQAEAD
                     EKVKAVVIACEGQTFFAGADITEFGKPPIMPWLPQVVDRIEECTKPVVAAIHGTALGG
                     GLEVALACHYRVAVPSAKLGTPEVKLGLLPGAGGTQRLPRVAGVEKALKMCATGNPIG
                     AKEACDCGLVDRLVEGDLIPHAVAFAEEVRDVRPLPKSSERQDRVDNVEPAVFDEFQK
                     ANARKFRGFEAPEANVRAVRFATEKPYPEGVIEERKLFMELMSGTQAKAQQYFFFAER
                     KAAKIDDILEDTQPRDVRKVGVIGAGTMGGGISMNF"
BASE COUNT          536 a          893 c          979 g          447 t
ORIGIN      
        1 catcgggcga ccgctggcgg ccggtgccgc tgatcgacga actcaagacg cgagcgcgcg
       61 aagccggcct gtggaacctg ttcatgccgc cggcgcctgc ggttccccag gtcgacgaca
      121 gcttcatctt cgaaggcgag cagctgacca acctcgaata tgcgctgtgc gccgaggaaa
      181 tggggcggat tccctgggcg agcgaggtct tcaactgctc cgcgcccgac actggcaaca
      241 tggaagtgct ccaccgctac ggcaagcgcg agcagaagga gcaatggttg gcgccgctta
      301 tgcgcgggga gattcgctcg gcgttcctga tgaccgagcc gggagtggcc tcgtcggatg
      361 cgaccaacat cgaatgctcc atccgccgcg acggggaaga atatgtgatc aacggccgca
      421 aatggtggtc gagcggcgcg ggcgacccgc gctgcaagat cgctatcctg atgggcaaga
      481 ccgacccgga cgctccggcc cacaagcagc agtcgatgat cctggtgccg atggatgctg
      541 cgggcataac cgttgagcgg gcgctgacgg tctatggcta cgacgatgcc ccgcacggcc
      601 atatggagat cgctctcgac gatgtgcggg tccacgcgtc gaacctgctg ctcggcgaag
      661 gacgcggctt cgagatcgcg cagggccggc tggggccggg gcggatccac cattgcatgc
      721 gcgccatcgg cgccgccgag gaagcgctga agctgatgtg cgagcgcctc cagagccggg
      781 tcgcgttcgg caagcggatt tccgagcaca gcatctggga gcagcgcatc gccgacgccc
      841 gcatagaaat cgaagcgacg cggctccttt gcctcaaggc ggccggcatg atggatcgcg
      901 ccggcaacaa ggcggccaag gccgaggtcg ctatgatcaa ggtgaaggcg ccggcgatgg
      961 cgctcaaggt gatcgacgac gccgtacagg cgttcggcgg cgccggagta agccaggaca
     1021 ctccgctggc gatgagctgg gcccacatcc gaacgcttcg cctcgccgac ggtccggacg
     1081 aggtccacaa ccgggcgatc gcgaagatcg aattcgagcg gcaccgaccg cgggacagca
     1141 attgatggct gtgctcgacc acaaggtcgc gatcgtcacc ggcgccgctt caggcatcgg
     1201 caaggcggcg gccgagctgt tccgcagcga aggcgccacc gtggtcgccg ccgaccgcac
     1261 cgacggcaaa ggcattacat cgctcgacgc gggctccgaa gcagaggtcg agacgctggt
     1321 tgagaagacc gtcgccgatc ttggtggcat cgacatcgtc ttcgccaacg ccggcgtttc
     1381 gggtggaatg gcgggtattt tcgagcagag cagcgccgac tggcaggaaa ttctccaggt
     1441 aaacctgatc ggcccgttcc tgctcatcaa atatgccgcc ccgcacatga aggagcgagg
     1501 tggcggctcg atcgtctgca ccgcctcggt cgcgggcctt cgctccggcg cgggcggccc
     1561 ggcttattcg gcgtcgaagg cgggcctcat caacctggtg aaggtcgcgg cgacgcagct
     1621 tgcgggctcg aacgtccggg tgaatgcgat ctgcccgggc ctgatcgaga ccggaatgac
     1681 ccgcgacatt tacgaatggg cgcgctcggc cggcaaggaa agccggattg gccgcctcaa
     1741 cccgatgcgg cgcggcggcg aacccgacga aatcgcctca gttgcgctgt ttctggcatc
     1801 ggacgcggcc agctacgtca acggccaggc cattgcggtt gacggcggcc tcagcgcttc
     1861 ccaccccttc tcgcagcagg aatacggccg tacctcggcc tgaatcaccg gaggacgaat
     1921 gcccaacccg atttccaccc ggcaccacgg cgacgtgctg atcgtcgaat ccaacaaccc
     1981 gccggtgaac gcgctttcgg cgcccgttcg gcaggggctg gtcgatgcca tcgagcaggc
     2041 cgaggcggac gagaaggtaa aggcggtggt catcgcctgc gaagggcaaa ccttctttgc
     2101 cggcgccgac atcaccgagt tcggcaagcc gcctatcatg ccctggcttc cccaggtcgt
     2161 ggacaggatc gaagagtgca ccaagccggt ggtcgcggcg attcacggaa cagcactcgg
     2221 cggcgggctc gaggtcgcgc ttgcctgcca ctaccgggtt gccgttccgt cggcgaagct
     2281 cggcactccg gaggtgaagc ttggcctgct acctggagcg ggcggcaccc agcggcttcc
     2341 gcgcgtggcg ggagtggaaa aggcgctcaa gatgtgcgcg accggcaacc cgatcggggc
     2401 gaaggaagcg tgcgactgcg ggttggtgga ccggttggtc gagggcgacc tgatcccgca
     2461 tgcagtggcc ttcgcggaag aggtgcggga tgttcgtcca ctcccgaagt cgtcggagcg
     2521 acaggaccgt gtcgataatg tcgaaccggc ggtgttcgac gaattccaga aggcgaatgc
     2581 ccgcaagttc cgcgggttcg aggctccgga agccaatgtg cgtgcggtca ggttcgcgac
     2641 cgagaagcct taccccgaag gcgtgattga agagcgcaag ctgttcatgg agctgatgag
     2701 cggcacccag gccaaggcgc agcaatattt cttcttcgcc gaacgcaagg ccgccaagat
     2761 cgacgacatc ctcgaggaca cccagccgcg cgacgtccgc aaggtcggag tgatcggtgc
     2821 cggcacgatg ggcggcggaa tttcgatgaa ttttc
//
LOCUS       DATAKH010000085         6754 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_9575,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000085 DATAKH010000000
VERSION     DATAKH010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6754
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9575"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VHN55_03415"
     CDS             <1..709
                     /locus_tag="VHN55_03415"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX2803019.1"
                     /translation="QVGFVLPAERGGFVAGLQSGLHHFDERSGRFELIVAVEPDKPGN
                     RLNDGVVDPSGRLWFGTMDDGESGRTGAFYCFAGGTLRPTGIEGIAITNGPALSPDGR
                     RLYVVDTRERTIDCAEVAEDGSVGPRRLFATIEPEAGNPDGPTIDSEGHLWVALYGGW
                     AARRYSPDGELAETVRFPVANITKLAFGGGDLRTVVATTAAQKLTAADMAKQPLAGAL
                     FEFQSDVAGIACPLVRY"
     gene            complement(736..811)
                     /locus_tag="VHN55_03420"
     tRNA            complement(736..811)
                     /locus_tag="VHN55_03420"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(776..778),aa:Ala,seq:cgc)
     gene            1042..2079
                     /locus_tag="VHN55_03425"
     CDS             1042..2079
                     /locus_tag="VHN55_03425"
                     /inference="COORDINATES: protein motif:HMM:NF021458.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2171 domain-containing protein"
                     /protein_id="HEX2803020.1"
                     /translation="MAYDRYDTRRESGRHFDHDRGRRDERGFFERAGDEVASWFGDEE
                     AERRRREDERRDRMDRERGFGRDWDRDRYTYRGQGRDFDRERDWDRNRGSSRAMGWSS
                     GDRDHRSSRSRSGQDYERMGYAGYDHDFSSRGGFAGTSTPDYMSPTGPSFGYGGTFGA
                     GTSSGYGSGGWGSEFEGRDRDRYARSERDDSRFTGNRDNDRHYHSWRQRQLDELDRDY
                     DQYCRERQERFESDFGSWRQNRLSKRRNLGSIREHMDVVGSDGETVGKVDCVKGDHIV
                     LTKSDSDDNRHHAIDCSMVQTVEGDQVRLEMPAEEAKSRWEDADKRGFFGRNEREDTS
                     LERSFSGTYES"
     gene            2190..3176
                     /locus_tag="VHN55_03430"
     CDS             2190..3176
                     /locus_tag="VHN55_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEX2803021.1"
                     /translation="MARAWHLVSRPEGLPTSDNFALKEIELPALAEGQVHVRNLWLSV
                     DPYMRGRMNESKSYIPPFPLDGPMEGGAVGEVVESKADGYSAGDLVLHMAGWRDEAVL
                     PAKALTKLPQMGAGPQAFLSILGMPGATAYFGLLDVAQAKDGDIVFVSAAAGAVGSIV
                     VQIAKAKGMKVIGSAGGTAKCDFVRSLGADAAVDYRDGPILKSLRDAAPDGIDVYFDN
                     VGGDHLDAAFARARLHARFALCGMIAGYNSREAMHFRYIIRMIAMRITMRGFLYGDYV
                     SRLDEFYRDMGEWVASGKVKAHETVFDGLAKTPDAFLGLFGGANTGKMLVRV"
     gene            complement(3173..4060)
                     /locus_tag="VHN55_03435"
     CDS             complement(3173..4060)
                     /locus_tag="VHN55_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEX2803022.1"
                     /translation="MRLGRGNDDDFIDRTGQSGGFGFGGGGGNMLGCLLPLVASRFGL
                     IGVLVLVLGYCALQSLGGGGGLIPGGGAPESRQTGESRLDPQTSSFLQAVLSNTDLVW
                     TDFFRQNGAQYREPKMVAYTGGTQTACGYGQAVMGPFYCPPDQRIYLDPTFLSELRTR
                     FGASGDFAQAYVIAHEVGHHVQNLTGALDDAQRTQSGLGKAGANQVQVGVELQADCYA
                     GVWAANAKAPDGTAALEPGDIEEGMRAAEAIGDDTLQQQTQGRVVPESFTHGTSAQRM
                     AALRKGLETGDPNACQYNR"
     gene            4155..4922
                     /locus_tag="VHN55_03440"
     CDS             4155..4922
                     /locus_tag="VHN55_03440"
                     /EC_number="1.1.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003858 - 3-hydroxybutyrate dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HEX2803023.1"
                     /translation="MILEGKVALVTGSTSGIGLAIARAFAAEGAKLMINGFGDAAGIA
                     KLSEELGAVHDGADLSDPDAIARMLARCADELGSPDVLVNNAGIQHVSPVENFPPEKW
                     DSIIAINLSAVFHTTRHALPAMKAKGWGRVVNTASAHSLVASPNKSAYVAAKHGVAGF
                     TKTVALEAARDGVTVNCISPGYVWTTLVENQIPDTMKARGLTREQVMNDVLLAAQPTK
                     QFVTPEQVAALAVFLCREEAASITGANISMDGGWTAA"
     gene            4933..5574
                     /locus_tag="VHN55_03445"
     CDS             4933..5574
                     /locus_tag="VHN55_03445"
                     /inference="COORDINATES: protein motif:HMM:NF027558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4893 domain-containing protein"
                     /protein_id="HEX2803024.1"
                     /translation="MRPAFFAFALTLALAGGGCSMLQPSTAVVQPQRNWRAVATEDDR
                     ERLREWRDAFTSGLAAARASGHGEAIAREGALLDPDSAIGGPIPNGMYRCRVIKVGAK
                     SAGMLDYVAYPYFRCQVQQEQEVQGFAKLSGSQRQVGLIFPNDQLRQVFLGTLMLADE
                     SRAMQYGVDPERDVAGFVERIAPRRWRLVMPRPHFESLVDVMELVPEGSGGGS"
     gene            5575..>6754
                     /locus_tag="VHN55_03450"
     CDS             5575..>6754
                     /locus_tag="VHN55_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003044278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX2803025.1"
                     /translation="MRYAIAAGLIAMTLSSTAPAATLRDSVAADMPQLMALYRDLHSN
                     PELSMQEVRSPAKLAAEARKLGFAVTEKVGKTGVVAVMKNGPGPVLLIRADMDALPVK
                     EQTGLPFASKATGKLPDGTVTPVMHACGHDTHMTAWLGTARRLAAMKDQWSGTLVMIL
                     QPGEEIGAGAKAMLDDGLYVRFPKPTHALAFHDAASLPAGVVGVTPGYALANVDSVDI
                     TIHGVGGHGAYPQSTKDPIVLASRIVTTLQTLVSRENDPQSPAVVTVGSFHAGSKHNI
                     ISAEAKLQLTVRSYTPEVRKLLLDGIRRIARGEAIAAGLPEDKMPVVTVRDEEYTPST
                     FNTEALGKQTLALFRQNFGEARTVETPPVMGGEDFGRYHRADKSIESLIFWVGGVPKA
                     Q"
BASE COUNT         1202 a         2189 c         2237 g         1126 t
ORIGIN      
        1 acaggtcggc ttcgtgcttc cggcggaacg cggcggtttc gtcgccgggc tgcaaagcgg
       61 gcttcaccat ttcgacgagc gctcgggcag gttcgagctc atcgtcgcgg tcgagcccga
      121 caagcccggc aaccgcctca acgacggcgt ggtcgacccc tccggccgct tgtggttcgg
      181 gacgatggac gacggcgaga gtgggcggac cggcgccttc tactgcttcg ccggcggcac
      241 cctccggccg accggcatcg aggggatcgc gatcacgaac ggccccgctt tgtcgcccga
      301 cggccgccgc ctgtatgtcg tcgacacccg cgaaaggaca atcgactgcg cagaggtcgc
      361 cgaggacggc tcggtcgggc cgaggcggct gttcgcgacc atcgagccgg aagccggcaa
      421 ccccgacgga ccgacgatcg acagcgaagg tcatctgtgg gtggccctct acggcggctg
      481 ggcggcgcgg cgctattcgc cggacggcga gctggccgag acggtgcgct tcccggtcgc
      541 caacatcacc aagctcgctt tcggtggagg cgacttgcgg accgtggtgg cgacgaccgc
      601 ggcccagaaa ctgactgccg cggacatggc aaagcagccg cttgccggcg cattgttcga
      661 gtttcaatcc gatgtcgccg ggatagcctg cccgctcgtc cgctactaaa gccgcgatga
      721 ccaggagagt taggctggtg gagctgaggg gaatcgaacc cctgacctct gcagtgcgat
      781 tgcagcgctc tcccatctga gctacagccc cgcgccgcca gcctggcagg aaaaccggtg
      841 tttttccggg ttccggagcg gctcccttag cggcggttca ctccccttgc aatcgctcgc
      901 cgcactcctt gcccgctctg acgaaaacag ccgtatttca agggctaatt ccggaacggc
      961 gccattcctc cgttcgtttt tttctgtgcg acgcaagggc gtttcccgtc ctcgcgcaga
     1021 tttccaacga ggagaatgct gatggcatac gaccgctacg acacgcgccg cgaaagcggc
     1081 agacacttcg accacgaccg cgggcgccgg gacgaacgcg gcttctttga acgggccggc
     1141 gacgaagttg cctcctggtt cggcgacgag gaggcggagc ggcggcgccg cgaagacgag
     1201 cgccgggacc ggatggatcg agagcgcgga ttcggccgcg actgggaccg cgaccgctac
     1261 acttatcgcg gacagggacg cgacttcgat cgcgagcgcg actgggaccg aaaccgcggg
     1321 tcttctcgcg ccatgggctg gtcttcgggt gaccgcgacc atcgctcttc taggtcgcgc
     1381 tccgggcagg actacgagcg catgggctac gccggctatg accacgactt cagctcgcgc
     1441 ggcggcttcg ccggaacctc gactcccgac tacatgtctc cgaccggtcc gagcttcggc
     1501 tacggcggga ccttcggcgc cggcaccagc agcggctacg gaagcggcgg ctggggatcc
     1561 gagttcgaag gacgggatcg agaccgttat gcccgctcgg agcgcgacga ttcccgcttc
     1621 accgggaacc gcgacaatga ccgccactat cattcgtggc ggcagcgtca gctcgatgaa
     1681 ctcgatcgcg actacgacca atattgccga gagcggcagg agcgcttcga aagcgacttc
     1741 ggcagctggc ggcagaaccg gctgagcaag cgccggaatc tcggcagcat ccgcgagcat
     1801 atggatgtcg tcgggagcga cggcgagacg gtcgggaagg tcgactgcgt aaagggcgac
     1861 cacatcgtcc tgaccaagtc cgactcggac gataaccgcc accacgcgat cgattgttcg
     1921 atggtccaga cggtcgaagg cgaccaggtc cggctcgaaa tgccggccga ggaagcgaag
     1981 agccgctggg aagacgccga caagcgcggc ttcttcgggc gcaacgagcg cgaggatacc
     2041 agcctcgagc gcagcttttc gggaacctac gagagctagc cgcaaaccag ccaacggttg
     2101 aactggaagg cccggcggca cgcgctgccg ggcctttcgc atgcgcgccg cggcgactat
     2161 cgcagcggcg acaagcagcg gagatgcaaa tggcccgagc ctggcacctg gtcagccgtc
     2221 ccgaagggct tccgaccagc gacaatttcg ccctgaagga gatcgagctt ccagccctag
     2281 cggaggggca ggttcacgtc cgcaacctgt ggctttcggt cgatccctac atgcgcgggc
     2341 ggatgaacga gtcgaagtcg tacattccgc cgtttccgct cgacggcccg atggagggcg
     2401 gcgccgtcgg cgaagtcgtc gaatcgaagg cggacggcta ttcggccggc gacctggtcc
     2461 ttcacatggc cggctggcgc gacgaggcgg tgcttcccgc caaggcgctg acgaaattgc
     2521 cgcaaatggg tgccgggcct caggcattcc tgagcatcct cggaatgccg ggcgcgaccg
     2581 cctatttcgg gttgctcgac gtcgcgcaag cgaaggacgg cgacatcgtt ttcgtctcgg
     2641 ccgccgctgg cgcggtgggc tcgatcgtcg ttcaaatcgc caaggcgaag ggaatgaagg
     2701 tgatcggctc ggcgggcggt acagccaagt gcgatttcgt ccgctcgctg ggcgcagacg
     2761 cagcggtcga ttatcgcgac ggcccgatcc tgaagtcgct ccgagacgcc gcgcccgacg
     2821 ggatcgacgt ctatttcgac aatgtcggcg gcgaccatct cgacgccgcc tttgcgcgtg
     2881 cacgactcca tgcccgcttt gcgctgtgcg ggatgatcgc cggttacaac agccgcgagg
     2941 cgatgcactt ccgctacatc atcaggatga tcgcgatgcg gatcacgatg cgcggcttcc
     3001 tttacggcga ctatgtctcc aggctcgacg agttctaccg cgacatgggc gaatgggtcg
     3061 cgagcggaaa ggtcaaggcg cacgagaccg ttttcgacgg gctggccaag actcccgacg
     3121 ccttcctcgg cctgttcgga ggcgccaaca ccggcaagat gctggtccgg gtctagcgat
     3181 tatattggca ggcgttcggg tctccggttt ccaggccttt ccgaagcgcc gccatccgct
     3241 gtgccgaggt gccgtgagtg aagctttccg ggacaacgcg cccctgagtc tgttgctgaa
     3301 gcgtgtcgtc gccgatcgct tcggcggcgc gcatgccttc ttcgatgtcg cccggttcca
     3361 gtgccgcggt gccgtcgggc gccttcgcat tggccgccca gacaccggcg tagcagtcgg
     3421 cttgcagttc gacgcccacc tgcacctggt ttgcgcctgc tttgcccagc cccgactgcg
     3481 ttcgctgggc gtcatcgagt gcgccggtca ggttctggac gtggtggcca acctcgtggg
     3541 cgatgacata ggcttgggca aagtccccgg acgcgccgaa gcgggtacga agctccgaaa
     3601 ggaaggtcgg gtcaaggtag atccgctggt cgggcgggca atagaacggc cccatcacgg
     3661 cctggccgta gccgcaggca gtctgtgtgc cgcccgtata agcgaccatt ttcggctcac
     3721 gatattgcgc gccgttctgg cgaaagaaat ccgtccacac caggtcggtg ttggacagca
     3781 ctgcctgaag gaagctcgat gtctgggggt cgagacggga ctcgcccgtt tgccggcttt
     3841 caggcgcacc gccgccggga ataaggccgc cgccgccgcc cagggactgg agggcacaat
     3901 agccgagcac cagcaccaat acaccgatga gtccaaaccg gctggcgacc agcggaagga
     3961 gacagccgag catattgccg cccccgccac cgaagccaaa tccgccgctt tggccagtac
     4021 ggtcgatgaa atcgtcgtcg ttaccgcgac ctagccgcat tcttgccctc ctctgtccgg
     4081 cctccaatgc gcgactgccc tacacggttg cattgcacgt cgggcagggc gactagcgag
     4141 ggaaaggagc gtcgatgatt ctcgaaggca aagtcgcgct ggtcacgggg tccacgtcgg
     4201 ggatcgggct cgccatcgcc cgcgcgttcg cggccgaggg cgcgaagctg atgatcaacg
     4261 gtttcggcga cgccgccgga atcgcgaagc tgagcgaaga gttaggggca gtccacgacg
     4321 gcgcggacct gtccgacccg gacgcgatcg ctcggatgct ggcccgttgc gccgacgagc
     4381 tcggttcgcc cgacgtgctc gtcaacaatg ccgggatcca gcacgtttcg cccgtcgaga
     4441 acttcccgcc ggaaaagtgg gactcgatca tcgcgatcaa cctttcggcg gtattccaca
     4501 caacccgcca tgcgcttccg gcgatgaagg cgaagggttg gggccgggtt gtcaacaccg
     4561 cgtcagcgca cagcctcgtc gcaagcccca acaagtcggc ctatgtcgcg gccaagcacg
     4621 gggtcgcggg attcaccaag accgtcgcgc ttgaggcggc tcgcgacggt gtcacggtca
     4681 actgcatttc gccaggatac gtctggacga cgctggtcga gaaccaaatc cccgatacga
     4741 tgaaggcgcg cgggcttacc agggagcagg taatgaacga cgtccttctc gccgcccagc
     4801 cgacgaagca gttcgttact cccgagcaag ttgccgcgct cgccgtcttc ctctgccgcg
     4861 aggaagctgc gtcgatcacc ggagcgaaca tcagcatgga cggcggctgg acggctgcat
     4921 aggctggcga cgatgcggcc cgcctttttc gccttcgcac tcaccctcgc ccttgccggc
     4981 ggcggatgtt cgatgctgca accgtcgacc gcggtggtgc agccgcagcg caactggcgc
     5041 gcagtcgcca ccgaggacga ccgcgaacgg cttcgcgagt ggcgcgacgc gttcacttcg
     5101 ggactcgccg cggcgcgcgc aagcgggcac ggagaggcca tcgcccgcga gggcgcgctg
     5161 ctcgatcccg actctgcaat tggcggaccg attcccaacg gaatgtaccg ctgccgggtc
     5221 atcaaggtgg gcgccaagtc cgcggggatg ctcgactatg tcgcttaccc gtatttccgc
     5281 tgccaggtgc agcaggagca agaggtccag gggttcgcca agctgagcgg ctcgcagcgg
     5341 caggtcgggc tcattttccc caacgaccag ttgcggcagg tcttcctcgg cacgctgatg
     5401 ctcgccgatg aatcgcgcgc aatgcaatat ggggtcgacc cggagcggga tgtcgccggc
     5461 ttcgtcgagc gcatcgcccc acggcgctgg cggctggtga tgccgcggcc gcatttcgaa
     5521 tcgctggtcg atgtgatgga gttggtaccc gaaggctcgg gagggggttc ttagatgagg
     5581 tatgcaattg ccgccgggct catcgccatg acgctttcta gcacagcacc tgccgcaact
     5641 ctccgcgaca gtgtcgcggc tgacatgccg cagttgatgg cgctgtaccg cgacctccac
     5701 tccaaccccg agctttcgat gcaggaggtg agatcgccag cgaaactggc ggcggaggcg
     5761 cggaaactgg gattcgccgt taccgagaag gtcggcaaga ccggcgtggt cgcggtgatg
     5821 aagaacgggc ccggtccggt gcttttgatc cgggccgata tggatgcgct tccggtcaag
     5881 gagcagaccg gccttccctt cgcttccaag gcgacgggca agcttcccga cggcaccgtg
     5941 acgccggtga tgcacgcctg cggccacgac acccacatga cggcctggct aggcacggcc
     6001 cgcaggctcg cggcgatgaa ggaccagtgg tcggggacgc tggtgatgat cctgcagccg
     6061 ggcgaggaaa tcggtgccgg cgccaaggcg atgctcgacg acgggctcta tgtccgattc
     6121 cccaagccga cccatgcgct tgccttccat gacgccgctt cgcttcccgc gggggtcgtc
     6181 ggagtcacgc ccggctatgc cctcgccaac gtcgacagcg tcgacatcac gatccacgga
     6241 gtgggcgggc acggcgccta tccgcagtcg accaaggacc ccatcgttct cgcttcgcgg
     6301 atcgtcacga cattgcagac gctggtcagc cgcgagaacg acccgcaaag cccggccgtc
     6361 gttaccgtcg ggagcttcca cgccggatcc aagcacaaca ttatctccgc ggaggcgaag
     6421 ctccaactga ccgtgcgaag ctacacgccc gaggtccgca agctccttct cgacggaatc
     6481 aggagaatag ctcgcggcga agcgatcgcg gccgggcttc ccgaggacaa aatgccggtc
     6541 gttacggtgc gcgatgagga atatacgccc tcgaccttca ataccgaggc gctgggcaag
     6601 cagaccctgg ccctgttcag gcagaatttc ggcgaggccc gaacggtcga gactccgccg
     6661 gtcatgggcg gcgaggattt cggccgctat caccgcgccg acaagtccat cgagagcctg
     6721 atcttctggg tcggcggggt gccgaaggcg caat
//
LOCUS       DATAKH010000086         2039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_36944,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000086 DATAKH010000000
VERSION     DATAKH010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36944"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2039
                     /locus_tag="VHN55_03455"
     CDS             <1..>2039
                     /locus_tag="VHN55_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803026.1"
                     /translation="QGELGDDEEPLILVNGERMDSLEDIGGFPVEALRNVKVLPRGSA
                     VRAGGRSGQRVVSLTLQRKMRAATLTAAPKVATAGDWHAGRGEALLTYVQGVTRANVA
                     LRVRGESSLLESERDILQPDQSAANHENFADLGDFRTLRPNVRNYDLNGSFNTRLAPW
                     LTGNATMRLNRNVSRSLRGLPSAFFILPATNPASPFPTDMTLAFLGQDPLRSRAVRNS
                     ADGRLTLNGRFGLWTSNFSARYGDSSDRYGSDRVAAFGAIPLGNSIDPFTADLSDLIE
                     IRRDTSRSHTVNKITQLSFTGPAFTLPAGPVQTTIEGRLSWYSLHASSTFSIGPDRRF
                     RRNEQAIRGAVDVPLTSRDSDVLAALGNISATAEYGRIHYSDAGSLDYYSIGAAWEPI
                     PPLQLRASVEHRERPASMQILGDPVVEYPLVRVFDPLTGETVDVTQLNGGNPDILPER
                     ATVRRLNAVARLMPRLNLQLNAEYTDTNARNYISSLPPASLPVMLAFPERFVRDTDGN
                     LVRVDFRPVNFDSHREKRLRWGLSMRTKLRSGNILSPPPADAGPSEPESGDEAAAPAP
                     VAAEAPTRRGSPATYLQLTANHSVVFSDKITIRPELDTVDLLGGGALGIGGGRLRHQI
                     DATAAVTSGGLGARAGFGWRGPSTLDTRIGGVSDTLHFSPVFLMNLRLFADAGRF"
BASE COUNT          355 a          683 c          629 g          372 t
ORIGIN      
        1 cagggcgaac tcggcgacga cgaagagccg ctgatcctgg tcaacggaga gcggatggac
       61 tcgctcgagg atatcggcgg cttcccggtc gaggctcttc gcaacgtcaa ggtgcttccg
      121 cgcggctccg ccgttcgtgc cggcggtcgg tccgggcagc gggtggtcag cctgacgctg
      181 cagcgcaaga tgcgagcagc gaccttaacc gcagcgccga aggtcgccac cgcgggtgat
      241 tggcacgccg gccgcggtga agcgcttttg acgtacgtgc agggtgtcac ccgcgccaac
      301 gtcgcacttc gtgtccgagg cgaaagctcg ctgctggaaa gcgaacggga catcctccag
      361 cccgaccagt cggcagcgaa ccacgaaaac ttcgcggacc tgggagactt ccgcacgttg
      421 cgcccgaacg ttcgcaatta tgacttgaac gggtcattca acacgcggct tgcgccatgg
      481 ctgaccggca atgcgaccat gcggctgaat cgaaatgtca gcaggtcgct ccgcgggctg
      541 ccgtcggcct ttttcattct ccctgcgaca aatccagctt ccccgttccc aactgacatg
      601 accttggcct tcctcgggca ggacccgttg cgctcgcgcg ccgtacgcaa cagcgccgac
      661 ggacgattga ccctcaatgg caggttcggc ctgtggacat cgaatttcag cgcgcgttac
      721 ggcgattcgt cggacagata cggcagcgac cgggtggcgg ccttcggcgc aattccgctc
      781 ggtaacagta tcgacccgtt caccgcggac ctgtctgacc tgatcgagat caggagagac
      841 acgagccgct ctcacaccgt caacaagatc acccaattgt ccttcaccgg gccggcgttc
      901 accttgccgg ccgggccggt ccagaccacg attgaggggc ggctgtcgtg gtactcgctc
      961 cacgccagca gcacgttttc gatcggtccc gaccggcggt tccgccgcaa cgagcaggcg
     1021 atccgcggcg ccgtcgacgt gccgctgacc agccgggaca gcgacgttct cgccgccctc
     1081 ggcaatatca gcgcgacggc cgaatacggc cgcatccatt actcggacgc aggctcgctc
     1141 gattattatt cgatcggagc ggcctgggag cccattccgc ccctacagct gcgcgcttct
     1201 gtcgagcacc gggaacggcc tgcgtcgatg cagatccttg gcgatcccgt cgtcgaatat
     1261 cccctggtgc gggtgttcga tccgctgacc ggcgaaactg tcgacgtcac ccagctaaat
     1321 ggcggaaacc ctgacattct gccggagaga gcgacggtcc ggaggctcaa tgcggtcgcg
     1381 cggctgatgc ccaggctgaa ccttcagctc aacgccgaat ataccgacac caacgcgcgc
     1441 aattatattt cctcgctgcc ccccgcgagc ctgccggtca tgctcgcttt tccggagcgt
     1501 ttcgtccgcg ataccgacgg caatctggta agggtcgatt tccgcccggt taacttcgac
     1561 agccaccgcg agaaacggct gcgttggggg ctgagcatgc gtaccaagct tcgctccggc
     1621 aacatcttgt cgccgccgcc tgccgatgct ggtccctcgg agcccgaaag cggcgatgag
     1681 gccgcggcac cggctcccgt cgcggctgaa gcaccgacac gccggggttc gcccgcgacc
     1741 tatctgcagc tgaccgccaa tcattcggtc gtcttctccg acaaaatcac gatcaggccc
     1801 gagctcgaca cagtcgatct cctcggtggc ggcgcgcttg gcattggtgg cggccgtttg
     1861 cggcatcaga tcgatgcaac tgcagccgtc acctccggcg ggctcggagc ccgagccggc
     1921 ttcggctggc gagggccgag cacgttggac acccggatcg gcggcgtaag cgatacgctg
     1981 catttttcgc cggtgtttct gatgaatctg cggttgttcg ccgacgcggg acgcttttt
//
LOCUS       DATAKH010000087        12931 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32037,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000087 DATAKH010000000
VERSION     DATAKH010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 12931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12931
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32037"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /gene="ftsA"
                     /locus_tag="VHN55_03460"
     CDS             complement(<1..819)
                     /gene="ftsA"
                     /locus_tag="VHN55_03460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010162706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX2803027.1"
                     /translation="MAATTDQPLIAALDIGSSKVSALIATRDAEDRLRVLGTGQRESR
                     GVKRGYITDIEKSEFAVREAVELAERMSGVTIDDVWASYCAGGLISDVANVEVELGGH
                     QVEQSDIAELLAAGRSALDRGNKMVLHAHPALYTIDGAQEVQQPIGLHADRLGVDIHV
                     IAADPAPLRNIDYIIRAAHLGVKAIVASPIASGLACLTEEERDLGVALVELGAGVTNV
                     SIHFGGILVGLHSIPLGAKDISDDIAATFGVNRRDAERLKCFYGSAMMSPRDNHA"
     gene            complement(825..1688)
                     /locus_tag="VHN55_03465"
     CDS             complement(825..1688)
                     /locus_tag="VHN55_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEX2803028.1"
                     /translation="MTAARVRRGSSGRSRKATPRPAKSAKRLPGDGTRASRWATIAFG
                     LFLALIAAVTLVALDIPARAMTAAGEAIGRAGFTVKRVDVVGIRHLDSATVYRIALDQ
                     RSMAMPLVDVQGVRERLLRYGWVKDARVSRRLPDTLVVDIVERQPAALWQDRDRLALI
                     DSDGVVIDRVSVTEMPDLPLLIGPGANVRSRDLDRLLDLAPTIKPQLVSAVWVGGRRW
                     DLNLQTGETIALPEGEEAASAALTKFAELDKSTGLLGRGLLRFDLRLPGKMIVRLPNA
                     AGESAPATPKD"
     gene            complement(1685..2611)
                     /locus_tag="VHN55_03470"
     CDS             complement(1685..2611)
                     /locus_tag="VHN55_03470"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017501209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEX2803029.1"
                     /translation="MNRDLHVVVLMGGWSAERDVSLSSGRGIVEALRGNDWTRVTELD
                     MDRDVAQRLAELNPDVVFNALHGTPGEDGSVQGMMDLMGLKYTHSGLETSVIAIDKEL
                     TKMVLVPHGIRMPEGRIVASESLFREDPLPRPYVLKPANEGSSVGVAIVTEDGNYGSP
                     IGRDVEGPWQHFERLLAEPFIRGRELTVSVLGDEALGVTELKPVAGFYDYDAKYTDGL
                     TEHVCPAEVPEGIAGAMMDMALRAHRLLGCKGASRSDFRWDDERGEEGIYLLEVNTQP
                     GMTPLSLVPEQAKQRGISYAQLVETLIAEALR"
     gene            complement(2608..3513)
                     /gene="murB"
                     /locus_tag="VHN55_03475"
     CDS             complement(2608..3513)
                     /gene="murB"
                     /locus_tag="VHN55_03475"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013933732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEX2803030.1"
                     /translation="MSGADQLSLPSLEGAIEPGGSLADFIWFRTGGPAEWLARPRDEA
                     DLSRFLSELDEDVPVTPIGVGSNLIVRDGGVEGVVVRLPKSFSKTTVEPGNRIRAGGG
                     AMGITVASAARDAGVAGLEFLRGIPGTTGGAVRMNAGAYGREVKDVLVEARLVLRDGS
                     IETWPAEKFGYTYRHSELPAGAVVVEALFQGEAGDPEVIGAEMDRIAAEREASQPLRS
                     RTGGSTFKNPPGHKAWALIDSAGCRGLRIGDAQVSEKHCNFLLNLGNATSAEIEDLGE
                     EVRRRVMAKTNILLEWEIQRIGSYE"
     gene            complement(3510..4922)
                     /gene="murC"
                     /locus_tag="VHN55_03480"
     CDS             complement(3510..4922)
                     /gene="murC"
                     /locus_tag="VHN55_03480"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEX2803031.1"
                     /translation="MKALGTDIGTIHFVGIGGIGMSGIAEVMHQLGYTVQGSDQSDSY
                     VVEKLRKAGIHVAIGHSADNLGDAAVVVTSTAISRGNPEVEAAIERRLPLVRRSEMLA
                     ELMRMQKTIAVAGTHGKTTTTSMVAAMLDAGGMDPTVINGGIINRYGSNARLGKSDWM
                     VVEADESDGSFLRLDGTIAVVTNIDPEHLEHWGSFDEVKRAFCEFIENVPFYGLAVLC
                     IDHPEVQSILGRVQDRRIVTYGFSALADLRAENVEPDGLGSRFDAVVFERDGERRTIS
                     GIHVPMPGRHNVQNALAAVAVALELGIPDEKIVTGFERFEGVKRRFTKAGEIDGATII
                     DDYAHHPVEIRAVLSAARETTEGRVIAVMQPHRYTRLGALMDDFQGAFNDADMVFIAP
                     VYAANEEPIEGVDSEALAEGLRAHGHRMVKAVSGPDDLAHSLRDIAAEGDTIICMGAG
                     DITKWATGLADGIANARTSK"
     gene            complement(4919..6082)
                     /gene="murG"
                     /locus_tag="VHN55_03485"
     CDS             complement(4919..6082)
                     /gene="murG"
                     /locus_tag="VHN55_03485"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEX2803032.1"
                     /translation="MARMNFVLAAGGTGGHMVPAHALAVELTARGHGVLVITDERGAK
                     IPGLFEKIAVHVLPAGRLGRNPLTLLKAAGAVLAGRYEAKTIYREHRPDAVVGFGGYP
                     AFPALLAASAMRIPTVLHEQNGVMGRVNRLLAGRATAIGTAFSEIDRLKPRYRDKVVL
                     VGNPVRDAIVKVGEMPFPPFDDTAPLKILVTGGSQGASILGQVVPDGLGMLDAALRHR
                     LQVVQQCRPDDIDDIRARYADMEIPAELMTYILDMPQKLAEAHLVIGRAGASTIAELT
                     AAGRPAILIPFGAATDDHQTANAREMVKAGGARAIPQDEFTPEALARQIETIAGDPNA
                     LANAAARSLSVGRPNAAGDLADLVERVGGGLSPLPVGLEPRKVTAYAGPGVPA"
     gene            complement(6082..7302)
                     /locus_tag="VHN55_03490"
     CDS             complement(6082..7302)
                     /locus_tag="VHN55_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative peptidoglycan glycosyltransferase FtsW"
                     /protein_id="HEX2803033.1"
                     /translation="MTGLISDRLRAKITVDANRYGRSDRSPAARWFWEIDRVLLLLVA
                     VLIGIGLIAVAAASPAAAVRYSGGSVQIPELYYFYRQIAWIAVGVPVMIGISMLSRER
                     ARRFSLFGAAFFFVLLAFVPVIGPEINGARRWIDIGVGQLQPSEFLKPFFVVAIAWLL
                     SLRESDKSLPVYLISAVVTGAVAFFLMKQPDFGSTIIFVVVWVALLALAGVSLRVLGG
                     LAAAGIIGVVLAYFFYDVATQRIDGFLFGEGDTFQTDNAMRTLTAGGLFGMGPGAGTR
                     KFGLPEPHTDYIFSVIGEEFGLIACLAIGLLYLTIVARVLVKLLDEDSPFAILAGAGL
                     VLQFGLQALINMAVNVQIAPSKGMTLPFISYGGSSMLALSIGMGLLLAFTRRNPYLTR
                     SPYVVNWSRETQQG"
     gene            complement(7299..8630)
                     /gene="murD"
                     /locus_tag="VHN55_03495"
     CDS             complement(7299..8630)
                     /gene="murD"
                     /locus_tag="VHN55_03495"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEX2803034.1"
                     /translation="MITARAFAGKHYAVYGLARSGIATVEALLASGAKVTAWDGKEEA
                     RANAPARADIANLDEADLTQFDSLVVTPGLPLNRHPIAQRARDAGVEIIGDIELFARA
                     RPELPPHKVVGITGTNGKSTTTALVHHILKTAGVPTTMGGNIGLPILAQDTLAEGGVY
                     VLELSSYQIDLTQSLDCDVAVLLNITPDHLDRYESFEAYVASKARLFDMQSQGHMAIF
                     VSEDEAAARIDRDVRAKRKMTEGQFAGWSLGVGTVDASGQLDQAHWAALQGPHNKLNV
                     LAAKSVIASLFEHWSECPPSLVEQALRTYPGLPHRMERVREKNGVLFVNDSKATNPTA
                     TAPALAAFESIRWILGGQAKTDNLDECAPHFRHVRSAYTIGEAAELFERLLSPHMPVK
                     NCGKLDEAVRQAAQDAKPGDTVLLSPACASFDQFRDFEDRGDQFRELVRAL"
     gene            complement(8627..9697)
                     /gene="mraY"
                     /locus_tag="VHN55_03500"
     CDS             complement(8627..9697)
                     /gene="mraY"
                     /locus_tag="VHN55_03500"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011413324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEX2803035.1"
                     /translation="MLYLIAQQLDFPGILNLIRYLSFRAGAASATALLIGLILGPWFI
                     SQLRVRQRKGQPIRAEGPQSHLAKVGTPTMGGLLILIAVTVSALLWMRVESVYVWGCL
                     LVTAGFGLIGFLDDYDKVKKAHHAGLSGKTRLALEFLIAGFATWLMVRHSGTLLHIPF
                     VKEPVADLGWFYIVFGAFVIVSFGNAVNLTDGLDGLASMPVIIASLTFLLITYLVGNA
                     RYSEYLGIPHVPAAGDLTVLCMAIVGATLAFLWFNAPPAAVFMGDTGSLALGGALGAI
                     AVATHHEFVLAIVGGLFVVEALSVVIQVAVYKRTGKRVFLMAPIHHHFEHIGWSEPTI
                     VIRFWIVSFVLALAGLSTLKLR"
     gene            complement(9685..11073)
                     /gene="murF"
                     /locus_tag="VHN55_03505"
     CDS             complement(9685..11073)
                     /gene="murF"
                     /locus_tag="VHN55_03505"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEX2803036.1"
                     /translation="MSVLWTSGEIAGATGGTASGEFEVTGVTFDSREVGPGDLFIAMP
                     GTIHDGHEFVPQAIASGAAGLIVSRPVDRPHVLVEDTEKALQDLGRAARERSGAIIIG
                     VTGSVGKTSTKEALFAALDRWRPGKVHRSVKSYNNHTGVPLSLARMPRDAEAAVLEMG
                     MNNPGEIAALTAMVRPNVALITAIAPAHIENLGSEEAIADAKAEIFAGLEPDGIAIIP
                     NDTPHRDRLLRAARRYADRIVTFGSGDADVHAVHAVRADNGGSLITAALLGSDVTFTI
                     SQRGEHWVSNALAVLAAVEAVGGDVALAGLALADLGGLKGRGRRHQLRADGGEALLID
                     ESYNANPASMAATLKSLGAETGVERRIAVLGPMRELGEHSDSLHAALAPAVVEAKVDE
                     LILVGEDMRPLDEALRGQVHVTRVADAAAAADAVSKLLRPGDAILVKASNSVGLAGVI
                     DRLTKEVAECST"
     gene            complement(11070..12485)
                     /locus_tag="VHN55_03510"
     CDS             complement(11070..12485)
                     /locus_tag="VHN55_03510"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011413322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEX2803037.1"
                     /translation="MRLCDLVDVGDDSEVTGFAIDHRKVTPGNVFGAFRGAVFNGEDF
                     IPDAVERGAVAVVACPEAKVERAVHLADERPRRLFARMASQYFGPYPSTVVAVTGTNG
                     KTSTVEMTRQIWRMLGDRSASIGTLGVTTSDDQVKTGLTTPDIVTFLSNMAGLKRMGI
                     SHVAYEASSHGLDQYRAEGVPLAAAAFTNFSRDHLDYHPDMDSYFEAKMRLFDEVTEP
                     GRAAVVWTDDAKSDEVIERTKRRGLEVLTVGRKGKTIRLVEQVPTPLGQTLQIEHGGK
                     PHRLAMPLIGAYQASNVLTAAALVLATGGEWNAIFSAMGRVAPVRGRLERAVISRAGA
                     PVYVDYAHTPDALEAAINALRPHVEGKLITVFGAGGDRDQGKRAPMGEVAARLSDVVI
                     VTDDNPRGEDPATIRGDIIAGAPDAIEVAGRKDAIARALEMAGQGDIVLLAGKGHETG
                     QIVGNRVLPFDDALVARECAV"
     gene            complement(12490..>12931)
                     /locus_tag="VHN55_03515"
     CDS             complement(12490..>12931)
                     /locus_tag="VHN55_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEX2803038.1"
                     /translation="KVGAGNPLPKGRRVFTADTSYRMRSLLRLVVTEGTGKKANAPGY
                     RVGGKTGTAQKLINGRYSHSVNVTSFAGVFPMDDPRYVIVVMLDEPKATPETYGFTTA
                     GWNVAPVVSKTVSRIAPMLGVTPDLHREPDMSEVLPYVHHDKER"
BASE COUNT         2161 a         4341 c         4230 g         2199 t
ORIGIN      
        1 cgcgtgattg tcgcgcgggc tcatcattgc cgagccgtag aagcatttga gccgctccgc
       61 gtcgcggcgg ttaaccccga aagtcgctgc aatgtcgtcg ctgatgtcct tggcgccgag
      121 cgggatagag tgaagcccga cgaggattcc gccgaagtgg atcgacacgt tcgtcacgcc
      181 ggctccgagc tcgacgaggg caactccgag atcccgctcc tcctcggtca ggcaggcgag
      241 gccggaggca atcggcgaag cgacaatggc tttgacgccg aggtgggcag cgcggatgat
      301 atagtcgatg ttgcgaagcg gcgccgggtc ggcggcgatg acgtggatat cgactccgag
      361 ccggtcggcg tgaagcccga tcggctgctg cacttcctgc gcaccgtcga tcgtgtagag
      421 cgccgggtgc gcgtggagca ccatcttgtt accgcggtcg agcgccgacc gtcctgcggc
      481 gagaagctcg gcgatgtccg actgttccac ctggtggcca ccgagctcga cctcgacatt
      541 ggcgacgtcg ctgattagcc cgccggcgca atagcttgcc cacacgtcat cgatcgtcac
      601 ccccgacatg cgctcggcaa gctcgaccgc ttcgcggacg gcgaactcgc tcttctcgat
      661 gtcggtgatg tagccgcgct tgactccgcg gctttcgcgc tggccggttc cgaggacgcg
      721 aagccggtcc tcggcgtcgc gcgtcgcaat cagggcgctg accttcgatg agccgatatc
      781 gagggcggcg atcagcggct ggtcggtcgt cgcggccaaa ggcgtcagtc cttcggcgtt
      841 gcaggggcag actcgcccgc agcgtttgga agacggacga tcatcttgcc gggaagcctg
      901 aggtcgaagc gcagcaagcc acggccgagg aggccggtcg acttgtcgag ctccgcgaac
      961 ttcgtcagcg cggcgcttgc cgcttcctct ccttcaggca aagcaatcgt ctcgccagtc
     1021 tgcagattga gatcccagcg gcggcccccg acccagacgg cggagacaag ctggggcttg
     1081 attgtcggcg cgaggtcgag aaggcggtcg aggtcgcgcg agcggacgtt ggctccgggg
     1141 ccgatgagca gcggcaggtc cggcatctcg gtgaccgaga cccggtcgat caccaccccg
     1201 tcggaatcga tgagcgcgag ccgatcgcgg tcctgccaca acgccgcggg ctggcgctcg
     1261 acgatatcga caacgagcgt gtcgggaagc cggcgcgata cccgcgcatc cttcacccat
     1321 ccatagcgca gcaggcgctc gcgcactccc tggacgtcga ccagcggcat tgccatcgag
     1381 cgctggtcga gcgcgatccg atagaccgtg gcgctgtcga ggtggcggat tccgaccaca
     1441 tcgacgcgct tgacggtgaa tccggcgcgt ccgatcgcct cgccggcagc agtcatcgcc
     1501 cgcgccggaa tgtccagcgc gacgagtgtg accgcggcaa tgagcgcgag gaacaggccg
     1561 aatgcgatcg tcgcccagcg gctcgcccga gtcccatcgc cgggcagccg ctttgccgac
     1621 ttggccgggc gcggagtcgc ctttcgcgac cgccccgagg aaccgcgcct gacccgcgct
     1681 gcggtcatcg aagcgcctcg gcgatcaagg tctccacgag ctgggcgtag gaaatgccgc
     1741 gctgcttcgc ctgctccggg accaggctga gcggagtcat tccgggctgg gtgttgactt
     1801 cgagcaggta aattccctct tcgccgcgct catcgtccca gcggaagtcg gagcgcgacg
     1861 cgcctttgca gccgagcagc cggtgagcgc ggagcgccat gtccatcatt gctcccgcaa
     1921 tgccttccgg cacttcggcg gggcagacat gctctgtgag cccgtcggta tatttggcgt
     1981 cgtaatcgta gaagccggcg accggcttaa gctcggtcac tccaagcgcc tcgtctccga
     2041 gcaccgaaac ggtgagctcg cgcccgcgga tgaacggctc ggcaagcaag cgctcgaaat
     2101 gctgccatgg gccttcgacg tcgcgcccga tcggcgatcc gtaattgccg tcctcggtga
     2161 cgattgcgac tccgaccgac gagccttcgt tggcgggctt gagtacatag ggccgcggca
     2221 gcgggtcctc tcggaacagg ctttcgctag ccacgatccg cccctccggc atccggatgc
     2281 catgcgggac gagcaccatc ttcgtgagct ccttgtcgat cgcgatgacc gaggtttcga
     2341 ggccgctatg ggtatatttg agacccatca ggtccatcat cccctggacg ctgccgtcct
     2401 cgccgggcgt cccgtggagc gcgttgaaca cgacgtcggg gttaagctcg gcgagccgct
     2461 gggcgacatc acggtccatg tcgagctcgg tgacccgggt ccagtcgttg ccgcgcagcg
     2521 cctcgacgat tccgcgaccg ctggacagcg acacgtcgcg ctcggccgac cagccgccca
     2581 tcagcacgac gacatggaga tcgcggttca ctcgtaactc ccgattcgct gaatttccca
     2641 ctcgagcagg atgttggtct tcgccatcac ccggcgccgc acctcctcgc ccaagtcctc
     2701 gatttcagcg ctcgtcgcgt tgcctaggtt gaggaggaaa ttgcaatgtt tttccgaaac
     2761 ttgcgcgtct ccgatcctca agccccggca gccggcggaa tcgatcagcg cccaggcctt
     2821 gtggcccggc gggttcttga acgtcgagcc tccggtgcgg cttcgaagcg gctgcgaggc
     2881 ttcgcgctcg gcggcgatcc ggtccatctc agcgccgatg acctcggggt cgccggcctc
     2941 gccctgaaac agcgcctcga cgaccacggc gccggcgggc agctcgctgt ggcggtaggt
     3001 gtagccgaac ttctcggcag gccaggtttc gatcgaaccg tcgcgaagca ccagccgcgc
     3061 ctcgacgagc acatccttca cctcgcgccc gtaagcgccg gcgttcatcc gcacagcgcc
     3121 gcctgtagtg ccggggattc cgcgcaggaa ttcgagcccg gcgaccccgg cgtctcgagc
     3181 tgccgaagcg acggttatcc ccatcgcccc gcctccggcc ctaattctgt ttcctggctc
     3241 aactgttgtt ttggagaaac ttttggggag ccgaacaacc acgccctcta cgccgccgtc
     3301 gcggacgatg aggttggagc cgactccgat cggtgtgact ggaacgtcct cgtccagctc
     3361 ggacaggaag cgcgacagat cggcctcgtc cctgggcctg gcgagccatt cggcaggccc
     3421 gccggtgcgg aaccagatga agtcggcaag gcttcctccc ggctcgatgg cgccttccag
     3481 gctcggcagc gacagctggt cggcgccgct cacttgctgg tcctcgcgtt ggcgatccca
     3541 tcagcgagcc cggtcgccca tttggtgatg tcgccggcgc ccatgcagat aatcgtgtcg
     3601 ccctcggcgg caatgtcgcg gagcgagtga gcgaggtcgt cgggaccgga aaccgccttc
     3661 accattcggt gaccgtgggc gcgaaggcct tcggccaggg cctcggaatc cacgccctcg
     3721 atcggctcct cattggcggc atagacgggc gcgatgaaca ccatgtcggc gtcgttgaac
     3781 gcgccttgga agtcgtccat cagcgcgccg agccgagtat agcggtgggg ctgcatcacc
     3841 gcgatcaccc tgccctcggt ggtttcgcga gccgccgaaa gaaccgcccg aatctctacc
     3901 ggatgatggg catagtcgtc gatgatcgtc gcgccgtcga tttcgccagc cttggtgaag
     3961 cgccgcttga ccccttcgaa tcgctcgaag ccggtgacga tcttctcatc ggggattcca
     4021 agctcgagcg cgaccgcgac cgcggccagc gcattctgga cattgtgccg gcccggcatc
     4081 ggaacgtgga ttccagatat cgtccgccgc tcgccgtcgc gctcgaacac taccgcatcg
     4141 aagcggcttc caagcccgtc cggctcgaca ttctcggcgc gcaggtcggc gagcgcggag
     4201 aagccatagg tgacgatccg ccggtcctgg acccggccga ggatgctctg cacttcggga
     4261 tggtcgatgc acagcaccgc cagcccgtag aagggtacgt tctcgatgaa ctcgcaaaag
     4321 gcgcgcttca cctcgtcgaa gctaccccaa tgctcgagat gctcgggatc gatgttggtc
     4381 acgaccgcga tggtgccgtc gagccgaagg aagctgccgt cgctctcgtc ggcttcgacc
     4441 accatccagt cgctcttgcc gagccgcgcg ttggagccgt agcggttgat gatcccgccg
     4501 ttgatcacgg tcgggtccat cccgccggca tcgagcatcg ccgccaccat cgaggtcgtc
     4561 gtcgtcttgc cgtgggttcc ggcgaccgcg atggtctttt gcatccgcat caactcggcg
     4621 agcatttccg agcgcctgac gagcggcagc cgccgctcga tcgcggcctc gacttccgga
     4681 ttgccgcgcg agattgcggt cgacgtaacg acgaccgcgg cgtcgccgag attgtcggcg
     4741 ctgtggccga tggcgacgtg gatcccggcc ttgcgaagct tctcgaccac gtaggaatca
     4801 gactggtcgg agccttggac cgtatagccg agctggtgca tcacctcggc gattccggac
     4861 atcccgatgc cgccaattcc gacgaaatgg atggtgccga tatcggtccc caacgctttc
     4921 atgccggcac cccgggtccc gcgtatgccg tgacctttcg cggttcgaga ccgacgggaa
     4981 gcggcgacag gccgccgccg acccgctcga cgaggtcggc aaggtcgccg gcggcattgg
     5041 ggcggccgac cgacagcgac cgcgcagccg cgttggcgag cgcgttggga tcgcccgcga
     5101 tggtctcgat ctgccgggcc agcgcttcgg gcgtgaactc gtcctgcggg atcgcccggg
     5161 cgccgccggc tttcaccatc tcgcgcgcgt tcgccgtctg atggtcgtcg gtcgccgctc
     5221 caaacgggat taggatcgcc ggacggccgg ctgcggtcag ctcggcgatc gtcgaggccc
     5281 cggcccggcc gatcaccaaa tgcgcctcgg cgagcttttg cggcatgtct agtatgtagg
     5341 tcatcagctc ggccgggatt tccatatctg catagcgcgc gcggatgtcg tcgatgtcgt
     5401 ccggccggca ttgctgcacg acctgcagcc ggtggcggag cgccgcatcg agcatcccca
     5461 gcccgtccgg tacaacctgc ccgagtatgc ttgcgccctg gcttccgccg gtgacgagga
     5521 tcttgagcgg cgcggtgtcg tcgaacggcg ggaacggcat ctccccgacc ttgacgatcg
     5581 cgtcgcgcac ggggttgccg accagcacga ccttgtcgcg atagcgcggc ttcagacggt
     5641 cgatctccga aaaagctgtg ccgatcgcgg tcgcccggcc ggcgaggagc cggttcacac
     5701 gccccatcac cccgttctgc tcgtggagca cagtcgggat tcgcatcgcg ctggcagcga
     5761 gtagcgcggg gaaggccgga tagccgccga agccgaccac cgcgtcgggc cggtgctcac
     5821 gatagatggt cttcgcctca tagcgcccgg caagcaccgc gcccgcagcc ttgagcagag
     5881 tcagggggtt gcggcccagc cttccggccg ggaggacatg aaccgcgatc ttttcgaaca
     5941 gcccgggtat tttcgctccg cgttcgtcgg tgatcaccag cacgccatgg ccgcgcgcgg
     6001 tcagctccac ggcgagtgcg tgcgccggga ccatgtgccc gccggttcct ccggcagcga
     6061 ggacgaagtt catgcgcgcc atcagccttg ctgggtctct cggctccagt tcacgacata
     6121 gggtgagcgc gtcagatacg ggttgcggcg agtgaatgcg agtagcagcc ccattccgat
     6181 cgaaagcgcc agcatcgatg aaccgccata gctgatgaac ggcagcgtca tgcccttgga
     6241 cggagcgatc tgcacgttga ccgccatgtt gatcagcgcc tgcagcccga actggagcac
     6301 cagcccggcg ccggcgagaa tcgcgaacgg cgaatcctcg tcgagcagct tgaccagcac
     6361 cctggcgacg atggtcaggt agagcaggcc gatggcgagg caggcgatga ggccgaattc
     6421 ctcgccgatg accgagaaga tgtaatcggt gtgcggctcg ggaagcccga acttgcgggt
     6481 ccccgcgccc ggccccatcc cgaacagtcc gccggcggtt agcgtgcgca tcgcattgtc
     6541 ggtctggaag gtgtcgccct cgccgaacag gaagccgtcg atgcgctggg tcgcgacatc
     6601 gtagaagaaa taggcgagga ccacgccgat gatgcccgcg gccgcaagtc cgccaagaac
     6661 gcgaagcgaa acgcccgcca acgcgagcag cgcgacccag acgacgacga aaatgatcgt
     6721 cgatccgaag tccggctgct tcatcaggaa gaaggctacc gccccggtga ccacagcgga
     6781 gatgaggtag accggaagcg acttgtcgct ctcgcggagg ctcagcagcc aggcgatggc
     6841 aacgacgaag aacggcttca gaaactccga cggctggagc tggccgacgc cgatgtcgat
     6901 ccagcggcgg gcgccgttga tttcggggcc gatgaccggg acgaaggcca gaaggacgaa
     6961 gaaaaaggca gcgccgaaca gcgagaagcg ccgcgcccgc tcgcgcgaca gcatcgagat
     7021 tccgatcatc accggtacgc cgacggcgat ccaggcgatc tgccggtaga aataatagag
     7081 ctcggggatc tggacgctgc cgcccgaata gcgaaccgcg gctgcgggcg acgcggcggc
     7141 gaccgcgatg aggccgatcc cgatcagcac cgcgacgagc aggagcagga cgcggtcaat
     7201 ttcccagaac cagcgcgccg ccggcgaccg gtcggagcgg ccgtagcggt tggcgtcgac
     7261 ggtgattttc gccctcagcc tgtcggaaat cagccccgtc ataatgccct caccagctcg
     7321 cggaattggt cgccgcggtc ctcgaagtcc cggaactggt cgaagctcgc gcaggccggc
     7381 gacagcagga cggtatcacc cggcttcgcg tcttgcgcgg cctgccgcac cgcctcgtca
     7441 agttttccac aatttttcac gggcatgtgc gggctcagca ggcgctcgaa cagctccgcg
     7501 gcctcgccga tcgtgtaggc ggagcggacg tgcctgaaat gcggcgcgca ttcatcgaga
     7561 ttgtcggttt tcgcctgccc gccgaggatc cagcgaatgg actcgaacgc ggcgagcgcc
     7621 ggcgcggtcg cggtggggtt ggtcgccttg ctgtcgttga cgaacagcac cccatttttc
     7681 tcgcgcaccc gctccatccg gtgcggcagg ccggggtagg ttcggagggc ctgctcgacc
     7741 agcgacggcg ggcattcgct ccagtgctcg aataggctgg cgataacact cttggctgcc
     7801 agcacgttca gcttattgtg tgggccctga agtgccgccc agtgggcttg atcgagctgt
     7861 ccggaggcat cgacagtgcc gacacctaac gaccagcctg cgaactgacc ttccgtcatc
     7921 ttgcgttttg cccgcacatc gcgatcaatc cgcgcagccg cctcatcctc cgaaacgaaa
     7981 atcgccatgt gtccctggga ttgcatgtcg aacagccgtg ccttcgacgc cacataggcc
     8041 tcgaagctct cgtaccggtc gagatggtcg ggcgtgatgt tgaggagcac cgcgacgtcg
     8101 cagtccaggc tctgcgtcag gtcgatctgg tagctcgaca gctccagcac atagacgccg
     8161 ccttcggcca gcgtgtcctg ggcgaggatc gggagaccga tattgccgcc catcgtcgtc
     8221 ggcacgcccg cggtcttgag gatgtggtgg acgagcgcgg tggtcgtcga cttgccgttg
     8281 gtgccggtga ttccgaccac cttgtgcggc ggaagttcgg gccgggcacg agcgaacagc
     8341 tcgatgtcgc cgatgatttc gacgccggcg tcgcgcgcgc gctgcgcaat cggatggcgg
     8401 ttgagcggca ggccgggcgt aacgacgagg gagtcgaact gggtgaggtc ggcttcgtct
     8461 agatttgcga tatcggcgcg cgcgggcgcg ttcgcccgcg cctcctcctt cccatcccac
     8521 gccgtcacct tcgccccgct ggcgagcagc gcttcaacag tcgcaatccc cgaccgcgcg
     8581 aggccgtaaa cggcgtaatg cttgcccgcg aaggcgcgcg ccgtgatcac cgcagcttca
     8641 gagtgctcag ccccgccagg gcgagcacga agctgactat ccagaagcgg attacgatgg
     8701 tcggctccga ccagccgata tgctcgaaat gatggtggat cggggccatc aggaaaacgc
     8761 gtttccccgt tcgcttgtaa accgccacct ggatgacgac gctgagcgcc tcgacgacga
     8821 acaggccgcc gacaatcgcc agcacgaatt cgtgatgggt ggcgaccgcg attgccccga
     8881 gcgcgccgcc cagcgcgagg cttccggtgt cgcccatgaa gacggccgcc ggcggcgcgt
     8941 tgaaccacag gaaggccagg gtcgccccga cgatcgccat gcacagcacc gtcaggtcgc
     9001 ccgctgccgg gacgtgcggg atcccgagat attccgaata gcgcgcgtta cccacgagat
     9061 aggtgatcag caggaatgtc aggctggcga tgatcacggg catagaggcg agcccgtcga
     9121 ggccgtcggt caggttcacc gcgtttccga acgacacgat cacgaaggcg ccgaagacta
     9181 tgtagaacca gccgaggtcg gcaaccggtt ccttgacgaa cgggatgtgg agcaaagtgc
     9241 cgctgtgccg gaccataagc catgtcgcga atccggcgat caggaattcc agcgcgagcc
     9301 tggtctttcc ggacaggccg gcatgatgcg ccttcttcac cttgtcgtaa tcgtcgagga
     9361 acccgatcag gccgaagccg gcagtcacca gcaggcagcc ccagacgtag acgctttcga
     9421 cgcgcatcca cagcagtgcc gacaccgtta ccgcgatcag gatcagcagg ccgcccatcg
     9481 tcggagtgcc gaccttggcg agatggctct gcggcccttc cgcgcggata ggctgcccct
     9541 tgcgctggcg gacccgaagc tgggagatga accagggacc gaggatcagc ccgatcagaa
     9601 gcgcggtcgc gctcgccgcg ccggcgcgga agctcaaata gcggatgagg ttgagaattc
     9661 ccggaaagtc gagctgctgg gcgatcaggt agagcattct gcgacttcct tggtgagcct
     9721 atcgatcact ccggcaagcc cgaccgaatt ggacgccttg acgagaatcg cgtccccggg
     9781 cctgagcagt ttcgataccg catcggcggc cgcggcggca tcggctaccc gcgtgacgtg
     9841 cacttgtcca cgaagcgctt cgtcgagcgg gcgcatgtcc tcgccgacca ggatcagttc
     9901 gtccaccttg gcttcgacga ccgcgggcgc cagcgcggcg tggaggctgt cgctatgctc
     9961 gccgagctcg cgcatcgggc cgaggaccgc gatccgccgc tcgaccccgg tttcggcgcc
    10021 gaggctcttc aaggtcgccg ccatggacgc gggattggcg ttgtagctct cgtcgatcag
    10081 cagcgcctcg ccgccgtcgg cgcgcagctg gtggcggcgg ccgcggccct tgaggccgcc
    10141 aagatcggcc agcgcaagcc cggccagcgc gacgtcgccg ccgactgcct cgaccgcggc
    10201 gaggaccgcg agagcgttcg acacccaatg ctcgccgcgc tgggaaatgg tgaaggtgac
    10261 gtcgctgccc aggagcgccg cggtgatcag gctcccgcca ttgtcggcgc gcaccgcgtg
    10321 gaccgcgtgg acgtcggcat cgccgcttcc aaaggtaacg atccggtccg catagcggcg
    10381 cgcagcccgg aggagccgat cgcgatgcgg cgtatcgttg gggatgatcg cgatcccgtc
    10441 aggctccaga ccagcgaaga tttccgcctt ggcgtcggcg atcgcctctt cggaaccgag
    10501 gttttcgata tgcgcggggg cgatggcggt gatcagcgcc acgttcggcc gcaccattgc
    10561 agtcagggcg gcgatctcgc ccgggttgtt catccccatt tcgagcaccg cggcttcggc
    10621 atcgcgcggc atccgcgcca gcgacagagg caccccagtg tggttgttat agctcttgac
    10681 cgagcggtga actttgcccg gccgccaccg gtcgagcgcc gcgaacagcg cctcctttgt
    10741 gctcgtcttg ccgaccgagc cggtgacgcc gatgatgatc gcgcccgagc gctcgcgagc
    10801 ggcgcggccg aggtcctgga gcgccttttc cgtgtcctcg acaagtacgt gcgggcgatc
    10861 gacgggtcgg gaaacgatca gccccgccgc ccccgaagcg atcgcctgcg gaacgaactc
    10921 gtggccgtcg tggatcgtgc ccggcatggc gatgaacagg tcgccggggc cgacttcgcg
    10981 gctgtcgaac gtcactcccg tgacttcgaa ctcgccgctt gcggttccgc cggtggcgcc
    11041 cgcgatctcg ccggacgtcc acagcacgct cataccgcgc actcccgggc aaccagtgcg
    11101 tcgtcaaacg ggagcactcg gttgccgacg atctgcccgg tctcatggcc ctttccggcg
    11161 agcaggacga tgtcgccctg ccccgccatt tcaagcgccc gggcgatggc atccttgcgg
    11221 ccggcgacct ctatcgcatc cggcgctccg gcgatgatgt cgccccggat cgtcgccggg
    11281 tcctcgccgc gcggattgtc gtcggtgacg atcaccacgt ccgaaagccg cgccgccacc
    11341 tcgcccatcg gcgctctctt gccctggtcg cggtcgccgc cggcgccgaa cacggtgatc
    11401 agcttcccct ccacgtgcgg gcgaagcgcg ttgatcgccg cttccagcgc gtcgggcgtg
    11461 tgcgcgtaat cgacatagac cggcgctccg gcgcggctga tcaccgcccg ctcgagccgc
    11521 ccgcgaaccg gcgccacgcg tcccatcgcc gaaaagatgg cgttccactc accgccggtg
    11581 gcaagcacca gcgccgcagc cgtcagaacg ttcgaagcct ggtaggcgcc gatcagcggc
    11641 atggcgaggc ggtgcggctt gccgccgtgc tcgatctgca aggtctgccc aagcggcgtc
    11701 ggcacctgct cgacgagccg gatggtcttg cccttgcgcc cgaccgtaag cacctcgagc
    11761 ccgcgccgct tcgtcctttc gatcacctcg tccgatttgg cgtcgtcggt ccacacaacc
    11821 gccgcccgcc caggctctgt gacctcgtcg aaaagccgca tcttggcttc gaaataggag
    11881 tccatgtcgg gatgatagtc gagatgatcc cggctgaaat tggtgaacgc cgccgccgcc
    11941 agcggcaccc cctcggcgcg atactggtcg agcccatgcg acgaggcttc gtaagcgaca
    12001 tggctgattc ccatccgctt aaggcccgcc atattgctca ggaaggtgac gatgtccggg
    12061 gtcgtcagcc ccgtcttaac ctggtcatcc gacgtggtca ccccaagagt acctatcgac
    12121 gccgaccggt ctccgagcat tcgccagatt tgccgggtca tctcgaccgt cgacgtcttc
    12181 ccgttggtgc cggtcaccgc gaccaccgtc gaaggatagg ggccgaaata ttgcgaggcc
    12241 atccgggcga acagccgccg cggccgctcg tcggcaaggt gcaccgcgcg ctcgaccttg
    12301 gcttccgggc aggcgacgac ggcgacggcg ccgcgctcga ccgcgtcagg gatgaaatcc
    12361 tcgccgttga aaaccgcacc gcgaaatgct ccgaacacgt tccccggagt taccttcctg
    12421 tggtcgatcg caaagccggt cacttcggaa tcatcgccga cgtccacgag atcgcacagg
    12481 cgcaccgatt cagcgctcct tgtcgtggtg gacgtaaggc aggacctcgg acatgtcagg
    12541 ctcgcggtgc aggtcggggg tcacgccgag catcggcgca atgcggctga cggtcttgct
    12601 gaccaccgga gcgacgttcc agccggcggt cgtgaagccg taggtttcgg gcgtggcctt
    12661 gggttcgtcg agcatcacca cgatgacata gcgcgggtcg tccatcggga acacaccggc
    12721 gaagctggtg acgttgaccg agtggctgta gcggccgttg attagcttct gcgcggtgcc
    12781 ggtcttgccg ccgacgcggt agcccggcgc attcgccttt ttgccggtcc cttcggtcac
    12841 caccagccgc agaagcgagc gcatccggta gctcgtgtca gccgtgaaca cgcgcctgcc
    12901 cttcggcagc ggattgcccg ccccgacctt c
//
LOCUS       DATAKH010000088        21623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_1968,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000088 DATAKH010000000
VERSION     DATAKH010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 21623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21623
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1968"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VHN55_03520"
     CDS             complement(<1..562)
                     /locus_tag="VHN55_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010184278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2803039.1"
                     /translation="MDIYLPIAGQSVNALLIVALGALVGVLSGMFGVGGGFLTTPLLM
                     FYGIPPPVAVASAATQITGASVAGVSVHLRRGGADLQMAGVMTVGGLFGSVLGAFLFQ
                     LLQASGQIDLVIGFLYVVLLGWIGGLMLWDALTALGYVNRSEDVQPERHTRWLASLPM
                     RWRFSVSGLYISPLAPLALGFGVGILT"
     gene            complement(617..1702)
                     /locus_tag="VHN55_03525"
     CDS             complement(617..1702)
                     /locus_tag="VHN55_03525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803040.1"
                     /translation="MSAPVRFLAIIVIGWTGVRAMTLGSLPGFTVSYAKEAPSSPVPP
                     IVATQFPPLPPVQSHAVQQWGPPPQWAMGYLPPPPQGQYYLPYPYPYAAASVPAAMPP
                     RPAWHLPSQASSAFESYGPDSALGGWQLSSLATVSERRSRPPQQSVVQAPVKPSLDRV
                     QLTSWALLRGSPAPGALAAGGTLGGSQAGARVTYNFNRWLAASLRTTNPVGGSRGAEA
                     AAGIRITPIRSIPIAITAERRQSISPHGGRSAFALFAEGGLYRQPMPWRFNLDAYVQA
                     GIVGLKSRDFFADGAFALSRPVWGRFSAGFGVWGGVQPGVYRIDAGPRISVRVRDNIH
                     AHVDWRQRLAGSAQPSSGPALTLAADF"
     gene            complement(1699..3084)
                     /locus_tag="VHN55_03530"
     CDS             complement(1699..3084)
                     /locus_tag="VHN55_03530"
                     /inference="COORDINATES: protein motif:HMM:NF011307.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family protein"
                     /protein_id="HEX2803041.1"
                     /translation="MTFADLLTRIAAELALFSALGFLLFAVNDLVVDVIYFARRGWRS
                     ATVYRRFPKMFGSTLAAETEEERFIALFVPAWDESAVIASMLRSTVDRLEYGNYRIFV
                     GHYRNDPATLAAIASIEDSRIEPVLVDSDGPTTKADCLNHLYDALLAFELGEDRPAAA
                     VVLHDAEDVVHPLELTVFNSLIDRAGLIQLPVQPLPDPRSRWIAGHYCDEFAEAHAKE
                     LVVREAIGASIPLAGVGCAIARAPLARLSALHEGYPFAGASMTEDYELGLRIGELGLK
                     TMFVRMPAFPGSRGVVASRGHFPASFGEAVRQKARWLGGIALTGWDRLGWHGGLGERW
                     MRMRDRRGPIAALLLLSGYAAALIWSQMWLARALGAPVQVGIDPALAILLWINLWLLL
                     WRIAMRALFTGSVYGWREGVRSVPRLVIGNLIAIAAAARALGMYVGRTPPAWDKTRHT
                     FPKQLPGKASA"
     gene            3204..3716
                     /locus_tag="VHN55_03535"
     CDS             3204..3716
                     /locus_tag="VHN55_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803042.1"
                     /translation="MVTALLRLRYRMPMRLTLIASLLLAVASDARAARILFAGGNWAA
                     IDFGARCEARSKALWVRRDTQPYAGFAFEPSGKLQGRFYVHLSRPARNGATVIATIGS
                     EPFLLDGRGEWAWSRNAGQQRAILEAARYGRSMRVDSRDRRGRRIVDHYELGGAATAI
                     DAAAAACAGK"
     gene            3769..4926
                     /gene="rlmN"
                     /locus_tag="VHN55_03540"
     CDS             3769..4926
                     /gene="rlmN"
                     /locus_tag="VHN55_03540"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010406073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEX2803043.1"
                     /translation="MPIPGMTEPVPVPRGQAAVRRADGRIDLVGLSKEQLRSTLEGKG
                     LDARQAKLRAKQLWHWIYNRGARDFEPMTDVAKAQRPWLAERFVISRPNVVEAQVSAD
                     GTRKWLLRTDDGNEFEMVFIPDADRGTLCVSSQVGCTLNCRFCHTGTMRLVRNLEPSE
                     IVGQVMLARDSLGEWPSQPEGRMLTNIVMMGMGEPLYNFDNVRDALKIVMDGDGLGLS
                     KRRITLSTSGVVPMMERAGEEIGVNLAVSLHAVRKEIRDEIVPLNRKYGIEQLLQSCA
                     DYPGANNARRITFEYVMLKDKNDSDEDARELVRLIRKYKLPAKVNLIPFNPWPGAPYE
                     CSTEERIRSFSNIVFEGGISAPVRTPRGRDIDAACGQLKTASERKRKSAAG"
     gene            4994..6283
                     /locus_tag="VHN55_03545"
     CDS             4994..6283
                     /locus_tag="VHN55_03545"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEX2803044.1"
                     /translation="MSLIGRMIGKLLKQGSLTLVGPDGKRETCGPGGGKHLTIRFIDR
                     RVPFDILKNPRLGMGEAYMEGRVVIEDGDVLELLELVTRSNRWEDGGEGRKIYGKSKL
                     KQFQALLRRNDPRRSRRNVAHHYDLGNELYETFLDEDMQYSCAYFTDPSNSLEQAQMD
                     KKAHIAAKLYLKPGQRVLDIGCGWGGMALYLHKVAKVDVLGITLSERQLAVARRRAEE
                     AGVGDHVRFELVDYRQLQGKFDRIVSVGMFEHVGARDYQQFFAKCSELLDRQGVMLLH
                     TIGRLGSTSGAPDPFTDKYIFPGYHIPALSQMSAASEKARLIVSDVETLRLHYAYTLR
                     HWLQRVRDNRAKIEGMYDARFFRMWEFYLAGGIVMFENGAGCNYQVQYVRDRSALPIT
                     RDYIAEAEKRLRRKSNGAKEKASPPPRRTSSKQTVPA"
     gene            complement(6289..8325)
                     /locus_tag="VHN55_03550"
     CDS             complement(6289..8325)
                     /locus_tag="VHN55_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009821028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEX2803045.1"
                     /translation="MAIARYVTLFGLVAVPFTAASANEGMWTFDAFPFERLRAEYGWA
                     PDQAWLDRVRAASVRLTGGCSASFVSDSGLIFTNHHCVASCLEDLSTDQANLLARGFN
                     ASSRAEEKMCPGQQAEVVTQISDVTPQVKRAIGGAKGEAAVKARTAAIATIEKDGCPD
                     TVTTRCQVVTLYGGGQYKLYKYRKYSDVRVVWAPEAAAQEFGGDPDNYNFPRYALDGA
                     FLRAYENGKPISTPQHLQWTGRDPVEGELIFVVGNPGSTQRMLTLSQYAYQREVNLPI
                     TLAIDSELRGRLISAMKQNDERKREGKQTLFGVENNLKRTIGRTRALVDPAFNAQLAA
                     REAELRAKAGNRFGDPWSEVDRAVAALRAIDTEWRFATPRGELFDYAFTLVRAAEERA
                     KPNPERLPGYSDSALPLKEKQLLDAKPIARWLETLLMEWSLSKAREYLGADHAQTRLL
                     LGSEAPEGLAQRLVAGTRLDDPAVRKALWEGGRTAVEASNDPMIVYARRLEANDRRLR
                     TIMDEQVDAPLTEARAKLADARFAAYGDSVYPDATFSLRITYGPVGGWVENGRKTDYR
                     TRFGGAFARATGAEPFKLADAFVAKRSSIDPEGTLDFVYAADTIGGNSGSPVIDRNGA
                     VIGANFDRNIHGLRNDYAYDSKMARSIAVSTAAIEQALKVIYPAPALLAELKGK"
     gene            complement(8415..8999)
                     /locus_tag="VHN55_03555"
     CDS             complement(8415..8999)
                     /locus_tag="VHN55_03555"
                     /inference="COORDINATES: protein motif:HMM:NF024890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEX2803046.1"
                     /translation="MKALLLSAAAVAAIAVSPAIGQSAPAEHPKMTMEPMTRDALVQK
                     VQAHFAKIDADKDGFVTKAEMEAARGSMRERMKQRMGQRMEQHGPEMFDRMDANKDGS
                     VSRAEFDAAHQSMAGHMAQPGGKRIRMMSGAGMAGHMFATADADNDGRVSLAEATAAA
                     AAHFDKADANRDGSLTPEEMRSGHRLMKGHHGRR"
     gene            9110..10660
                     /locus_tag="VHN55_03560"
     CDS             9110..10660
                     /locus_tag="VHN55_03560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803047.1"
                     /translation="MADKGGEGGVASRSARDWWERPYFLVLIVALSAVPLLYPDIPPL
                     VDLFGHMGRYRVQLDIGNSPWLREYYGFHWAAIVNLGVDLLVMPLGRLMGLEPSVKLL
                     VVAIPPITVAGFLWVAREVHGRIPPTAFFAIPFAYGHPFLFGFVNFGLSIAFAFLAFG
                     LWLRLGRLDRTRLRAWLFVPISLVIFFCHTYGWGVLGLLCFSAEAVRQHDRGIGWIKA
                     AVAAALHASVMALPLLVMLIWRSETHGGATADWFNWEAKWRWLLMALRDRWEWWDKGA
                     LIVCAAVFLLAAFHRSLAFSRNLAFSALVLAVGYILLPRIIFGSAYADMRLVPYALAV
                     VLLAIRFRDDVRPRFGSALAALGLAFVLARLAGTTASMTIAANDQQAKLAALDHVPMG
                     ARVVTLVGDPCGYSWPLPRNSHLGAMVVVRKHGFSNDQWVMEGLNLLDLRYPEAGHFS
                     ADPSQRVRPQGCGAGTLWTIDRALREVNPRALDYVWLVDPPPFDRSMTADMETVWRGP
                     GSILYRLR"
     gene            10660..11709
                     /locus_tag="VHN55_03565"
     CDS             10660..11709
                     /locus_tag="VHN55_03565"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX2803048.1"
                     /translation="MPKLSIVVPCYNEEACLRTLHERLAAAARSTFADDYEIVLVNDG
                     SKDSSWPIMQEMAAADPHVVAINLSRNHGHQLALTAGLDLALGELILVIDADLQDPPE
                     LLPAMVDTMRAEGADVVYGVRKSRSGETAFKRATAHGFYRLLSRATDVDIPLDAGDFR
                     LISRRALDVLLSMPEQARFIRGMVAWIGFRQVPILYDREQRFAGETKYPIAKMLRFAL
                     DALTGFSSAPLKLASHAGFALSIGSVAIILYILAGWAAGRSIPGWTSLMLVVVVLGAV
                     QMFVLALLGEYIGRLYNEAKGRPLYIVQEIAGGGRRAGRLGQVAEASANSDSPGGKGT
                     LPISRRSAAKQRSKK"
     gene            complement(11610..12353)
                     /locus_tag="VHN55_03570"
     CDS             complement(11610..12353)
                     /locus_tag="VHN55_03570"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010184162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2803049.1"
                     /translation="MGFPLMERLIYDRMAELDELHWWYRARREVLETLIRRRIALPEQ
                     ARILEVGCGTGHNLKMLDRFGRSDGIEIDAEARAVAEKRLGREISPAPLPELPGIERR
                     HYDLVAALDVVEHIDDDRAAIATLASCLKPGGTLLVTVPAHQWMWSAHDDLNHHKRRY
                     SKRSLKRLIEESPLRLDAIGYFNSVLFPFAVGARLAAKLAGRGGGDDKLPPKPVNYFF
                     ERCFAAERRLIGRVPLPPGLSLFALASAT"
     gene            complement(12338..12745)
                     /locus_tag="VHN55_03575"
     CDS             complement(12338..12745)
                     /locus_tag="VHN55_03575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006951996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEX2803050.1"
                     /translation="MIHNLHPKRRSVLNQLVRFVITGAFVTAIGIGVYALVALVLGWH
                     PQLGNLLAYLTATAVGYNMHSIWSFRGHGGERTHATKAKFVVVSLISYALNSFWVWLL
                     FTYFGFGPAVPILPMAFVTPAVTFFLNREWVFR"
     gene            12809..14608
                     /locus_tag="VHN55_03580"
     CDS             12809..14608
                     /locus_tag="VHN55_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AcrB/AcrD/AcrF family protein"
                     /protein_id="HEX2803051.1"
                     /translation="MLKRKDDLPVDRILAFLERHWKLITVAAWLLFCAWFLYTRWANA
                     IAFSLSDTDDNMRMMQVRALLNGQDWFDLRQYRLNAPVGADIHWSRVVDLPIAAIMLL
                     TRPFVGGADSERIAAALAPMLPYLVLLFGVALTARRLIDPRAFALPIIAMIVAGLTNG
                     MFMPERLDHHGWQLALVAVGTAGLADPKRLRGGLTLGISTALSIAIGLEMIIYLAVAG
                     AAVALFWVADAGERRRALGYAVSLGGALAFSFLVFASYANRSAVCDALSPVWLSSLLV
                     ASALLLLLAWLSPPDWRMRLGLAVGAGVVVGAFHALMWPNCLTRLEGVSPEVADLWLS
                     HVREARPVWRHGWRITSLILALPVTGTIGWALLAWRNRADRDLLRRTLAAWAPALIAM
                     LLLGWQTRTGPAAQMLAVVGAVAIAWILVPVLDRAGSPIVRTLGVAAAALVGFGAVVP
                     VGLNFAPADRMSPRSAQIERANRSCNFIGSYRPVALQPKGTVFTFVDYAPRLITLTHH
                     NAIMGPYHRNGEQIADTMKAFRGDADQARRIFRKYRADYLLTCPNSSTTTIFLSETPK
                     GFYGQLAKGQVPNWLTPVKLPPDSPFRMWKIER"
     gene            complement(14605..15231)
                     /locus_tag="VHN55_03585"
     CDS             complement(14605..15231)
                     /locus_tag="VHN55_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEX2803052.1"
                     /translation="MIELFGSALVTFLVIIDPPGCVPIFAGLTRGDPAAHRRAMAIRS
                     AVVAWFILMIFGLFGQPLLHALGIGLGSFRIAGGIMLFFIALEMVFEKRTQRREERAQ
                     SIEGTPEAEDISVFPMAIPMIAGPGSIASAMLLVSRADNYVEIGAVLAAMTLVVAITG
                     ASLLSAGWLMRLMGERIEAMISRLLGVILAALAAQFVVDGLRESFPSL"
     gene            complement(15228..16118)
                     /gene="folD"
                     /locus_tag="VHN55_03590"
     CDS             complement(15228..16118)
                     /gene="folD"
                     /locus_tag="VHN55_03590"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEX2803053.1"
                     /translation="MTARRIDGRAAALAVRERVAAAAADFEAGTGRAPGLATVLVGED
                     PASAVYVRSKGKATAEAGMQSLSHKLPDTTSEADLLDLVERLNADDSVDGILVQLPLP
                     SHIDSARVIAAIDPAKDVDGFHPVNAGRLATGLEALVPCTPLGCLYLLKHELGSISGK
                     DAVVIGRSNIVGKPMAMLLIGESATVTVAHSRTRDLPDVVRRADIVVAAVGRPEMVRG
                     GWIKPGAVVIDVGINRVPAAEEGKSRLVGDVAFDEAAEAASAITPVPGGVGPMTIAML
                     LRNTVVAANRRAGLPDPEGL"
     gene            complement(16115..16417)
                     /locus_tag="VHN55_03595"
     CDS             complement(16115..16417)
                     /locus_tag="VHN55_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX2803054.1"
                     /translation="MLHALFNIAHYLLWILMWVIIIQVILSWLFAFNVLNTSSQGLRT
                     FVHALDRLTAPLYRPIRAVLPDFGGIDFSPLVLLLLINVVQMLLDGAESSLTSAML"
     gene            complement(16453..17403)
                     /gene="egtD"
                     /locus_tag="VHN55_03600"
     CDS             complement(16453..17403)
                     /gene="egtD"
                     /locus_tag="VHN55_03600"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010545445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HEX2803055.1"
                     /translation="MPETADPKFREDVLSGLSEPIPAVPARWLYDRRGSELFDQITRL
                     PTYYPTATETTLLETIVPELAEAIPPGMAVVEFGAGSATKTPVLLEAIAPAAYVPVDI
                     SADYLELSAEELRKRFPTLPVHPVAADFARPFELPSVVAPLPKLGFFPGSTIGNFVPR
                     SATDLLRHFRELLGTGSLLLIGMDRVKPIERLVAAYDEPEGITAQFNLNLLERINREL
                     DGDIPLDAFRHEARWNDILSRIEMHLVAVRDVDFTIAGKPFSFAKGESIHTENSHKYE
                     RRGARLLLLAGGWTPLREWEDSSADFSIVLAEAQPNRFAP"
     gene            complement(17387..18628)
                     /gene="egtB"
                     /locus_tag="VHN55_03605"
     CDS             complement(17387..18628)
                     /gene="egtB"
                     /locus_tag="VHN55_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HEX2803056.1"
                     /translation="MATRRNPLDNRFSTLADRYSATRALTTDLAAPLSDADATIQPFP
                     DASPAKWHLAHTSWFFETFVLRAQVKGYEPFDERFAYLFNSYYEGEGPRHPRPKRGML
                     SRPSLDEIRDFRAYVDEILLDSLPSFGPDELELVELGINHEQQHQELLLTDILATFSE
                     NPLQPAYGRSSAREPSCQAAERWIEGRTGIVEIGATGSGFAFDHERPRHRDLLHPHEI
                     AAAPVTNAHWDKFIADRGYRTATLWLSEGWEWVQREAIERPLYWEKDGTHFTLAGPIE
                     RDPDAPVAHISYFEAEAFARWAGARLPREEEWESAAQLDDASSGQQLDRAGAVVPRSK
                     SGFFGSVWEWTQSAFASYSGFRPADGTVGEYNGKFMSGQLVLKGASCATPRGHSRATY
                     RNFFPPTARWQFTGLRLARDC"
     gene            complement(18604..19161)
                     /locus_tag="VHN55_03610"
     CDS             complement(18604..19161)
                     /locus_tag="VHN55_03610"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010218806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEX2803057.1"
                     /translation="MVKLNKIYTRTGDKGTAGLVDGSRVSKASARMAAIGDVDEANAA
                     VGAAIALLSDDAMSEELRRIQNELFDLGADIATPGDVEGALRIVASQVERLEREIDGM
                     NEGLEPLRSFILPGGSREVAALHLARTVVRRAERSAVALSQAEDVNSDALAYLNRLSD
                     HLFVAARLVAANQGGDVLWQPGATR"
     gene            complement(19161..19367)
                     /locus_tag="VHN55_03615"
     CDS             complement(19161..19367)
                     /locus_tag="VHN55_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010405338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HEX2803058.1"
                     /translation="MTIVLLVLLVAAMAATAYVLVRGVVTMAQGRVGSSERQQQWMRK
                     RVLFQAVAIFIVILILMLAGAAGR"
     gene            complement(19377..20225)
                     /gene="gluQRS"
                     /locus_tag="VHN55_03620"
     CDS             complement(19377..20225)
                     /gene="gluQRS"
                     /locus_tag="VHN55_03620"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003041309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEX2803059.1"
                     /translation="MLTSRFAPSPTGKLHLGHAYSAALAHHAAREASGDFLLRIEDLD
                     QTRSRPEFVAGIDENLRWLGLDPDAEPLVQSQRSQVYAQALERLRAQGLVYACFCTRS
                     DIAAALNAPHGPVGPRYPGTCRNLPDDPERRATTSHSWRLDSAKAVAAVGLPGWTEFD
                     GKGFCATADDIDDEILARKDAPASYHLACVVDDAASGVTLVVRASDLRSSTPVQRLLQ
                     ALLALREPTYLHHRLVVHEDGRRLAKRDRAPTLAAMRENGVDGRRLAEQLVEGRLPAG
                     FQLADA"
     gene            20398..20964
                     /locus_tag="VHN55_03625"
     CDS             20398..20964
                     /locus_tag="VHN55_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX2803060.1"
                     /translation="MDHPETIRHPESCPALVLNADYTPLSYFPLSLWPWQTAVKAMFL
                     ERVDVVAHYDREVHSPTVALKLPSVIALRQFVRPNAYPAFTRFNLFLRDRFRCVYCGS
                     NKELTFDHVVPRAQGGRTTWENVATACAPCNLKKGGRTPRQAGLHVEREPIRPTSWQL
                     QDHGRSFPPNHLHETWRDYLYWDVELTP"
     gene            21018..21572
                     /locus_tag="VHN55_03630"
     CDS             21018..21572
                     /locus_tag="VHN55_03630"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2803061.1"
                     /translation="METTGQIRNGGAQPRLLVIDSNRSYLGVIARRLAEFGYRVATAD
                     SAQSGLAEMYRIPADLVLCTADLRGTTGIELVRRVRDDPVHRDVPVLLIVGRSDPAAT
                     VRAFQAGADGVIRKPCHFEVLAACVARQLARADAMKHLASDKAALDAKIVSRVIELRE
                     TQAQLNAAEKERRRLAAIVRERAA"
BASE COUNT         3752 a         6993 c         7084 g         3794 t
ORIGIN      
        1 ccgtgagaat acctaccccg aacccgagcg ccagcggagc gagcggcgat atgtaaagcc
       61 cggaaaccga gaatcgccag cgcatcggaa gcgacgccag ccagcgcgtg tggcgctccg
      121 gttgtacgtc ctcggagcga ttgacatagc cgagcgcagt cagcgcatcc cacagcatca
      181 ggccgccgat ccagccgagc aggacgacgt acaggaaacc gataacgaga tcgatctggc
      241 cgcttgcctg aagcaactgg aacaggaagg cgccgaggac ggagccgaac agcccgccga
      301 cggtcatcac tccggccatc tgcaggtcgg ctccgccgcg ccggagatgg acggagactc
      361 cggcaacgct tgcgccggtg atctgcgtcg cagccgacgc gaccgcgacc ggcggcggga
      421 ttccgtaaaa catcagcaac ggggtcgtga gaaacccgcc gccgaccccg aacatgccgg
      481 acagcacgcc aactagcgcg ccgagcgcga caatcagcag cgcattgacc gactggcccg
      541 cgatcgggag gtaaatgtcc atggcctgga ggagggacta gccgcaaagc ggctgctggc
      601 caacggcatc ggtagcctag aagtcggcgg cgagcgtcag cgcgggtccc gagctcggct
      661 gcgcgctccc ggccagccgc tgccgccagt cgacatgggc gtggatattg tcgcggaccc
      721 gaacggatat ccgcggtccc gcgtcgatcc ggtagacgcc cggctgaacg ccgccccaga
      781 ccccgaatcc ggccgaaaat cgcccccaaa ccggccggct gagcgcaaat gctccatcgg
      841 cgaagaaatc acggcttttc aatccgacga tgccggcctg gacataggca tccaggttga
      901 agcgccaggg cataggctgg cgatagaggc cgccttcggc gaataatgcg aacgcggagc
      961 ggccgccgtg cgggctgatc gactggcgcc gttcggcggt tatcgcgatc gggatggaac
     1021 gaatgggagt aattcggata ccggccgcag cctcggctcc ccgcgagccg ccgaccgggt
     1081 ttgtcgttcg aagcgaagcg gcgagccagc gattgaaatt gtaggtaacc cgggcccccg
     1141 cctgactacc accgagcgtg ccgccggcgg ccagcgcgcc aggcgccggt gaaccgcgca
     1201 aaagggccca gctggtaagc tgcacccggt ccaggcttgg tttgaccggc gcctgcacca
     1261 cggattgctg gggcggcctg ctccgccgct cggagacagt tgcgagactg gagagttgcc
     1321 agcctccaag cgcgctgtcc ggcccgtaag actcaaaggc ggaggacgct tgcgacggga
     1381 gatgccacgc gggccgtggc ggcatcgctg ccggtaccga tgcagcggca tagggataag
     1441 gatagggcaa ataatattgc ccctgcggcg ggggaggcag atagcccatc gcccattgcg
     1501 gtggcggtcc ccattgctgg actgcgtgac tctgcacggg cggcaacgga ggaaattggg
     1561 ttgcgacgat cggcggaacc gggctcgatg gcgcctcctt cgcatagctc acggtaaagc
     1621 cggggagcga tccgagtgtc atcgcccgga caccagtcca gccgatgacg ataattgcca
     1681 ggaaccgaac cggtgcactc acgccgaggc tttccccggc agttgcttgg gaaaggtgtg
     1741 acgggttttg tcccacgcgg gcggggtgcg gccgacatac atgccgagtg cacgagcggc
     1801 ggcggcgatc gcaatcagat tgccgatcac caagcggggc actgaacgca cgccttcgcg
     1861 ccagccatag acggagccgg tgaacagggc tcgcatcgca atccgccaca acagaagcca
     1921 gagattaatc cacagcagga tcgccaaagc tggatcgatg cccacctgga ccggagcgcc
     1981 aagcgcccgg gcgagccaca tctggctcca gatcagcgcc gccgcatagc cggatagcag
     2041 gagcagcgct gcaatcgggc cacgacgatc ccgcattcgc atccatcgct cgccgagccc
     2101 cccgtgccag ccgaggcgat cccaaccggt gagcgcaatt ccgccgagcc agcgcgcctt
     2161 ctgccgaacc gcctcgccga agcttgccgg gaagtggccg cggctggcga ccaccccgcg
     2221 gcttcccgga aaggccggca tccgaacgaa catcgtcttc aggccgagct cgccgattcg
     2281 aagaccgagc tcataatctt cggtcatgct cgcaccggcg aacggatagc cttcgtgaag
     2341 ggcggagagg cgggcgagcg gagcgcgggc gatcgcgcaa ccgacgcccg caagcgggat
     2401 ggatgcgccg atcgcttcgc ggacgacgag ctccttcgca tgggcctcgg cgaactcgtc
     2461 gcaataatgg ccggcgatcc agcgcgagcg gggatcgggg agcggctgga ccggaagctg
     2521 gatcaggccg gcacggtcga taaggctgtt gaatacggtg agctcgagcg ggtggacgac
     2581 atcttcggcg tcgtggagca ccaccgcggc cgccggccgg tcctcgccga gctcgaaggc
     2641 caacagtgcg tcgtagagat ggttcaggca gtcggccttc gtcgtcggcc cgtcggaatc
     2701 gacgaggact ggttcgatcc gcgaatcctc gatgctcgcg atcgccgcaa gggtggcggg
     2761 atcgttccgg taatggccca cgaaaatccg gtaattgccg tattcgaggc gatcgaccgt
     2821 gcttcgcagc atcgacgcaa tcaccgccga ttcgtcccag gcgggcacga acagggcgat
     2881 gaaccgctct tcttcggttt ccgccgcgag ggtacttccg aacatcttcg ggaatcgccg
     2941 gtaaaccgtc gccgagcgcc atccgcggcg agcgaaatag atgacgtcga cgacgaggtc
     3001 gttcacggcg aacagcagga agccgagcgc gctgaacaga gccagctccg ccgcaattcg
     3061 ggtgagcagg tcggcgaaag tcattcgccg ccgcgtcccg atccactatg tccggcaaat
     3121 actcggtgca cggactcatc ctgtccaaac catcaccgag cgagcgggac gatggcacaa
     3181 gcagcaagat cgctcaagtt tggatggtta ccgcgctact tcggctgcgc taccggatgc
     3241 cgatgcgcct gaccttgatt gcctcgctgt tgcttgccgt tgcgtcggac gcccgcgccg
     3301 cccggatatt gttcgccggg ggcaactggg ctgcgatcga cttcggagct cggtgcgaag
     3361 cgcgttcgaa agctctctgg gtcaggcgcg acacgcagcc ttatgccggt ttcgccttcg
     3421 agccgtcggg aaagctgcag ggccgctttt acgttcatct cagccgtccg gcgcggaacg
     3481 gggcgacggt gatcgcgacg atcggctccg aaccgttcct tctcgacggc aggggcgagt
     3541 gggcgtggag ccgcaatgcc gggcagcagc gcgcaatcct cgaagcggca cgatacggac
     3601 gctcgatgcg ggtcgacagc cgggaccgcc gcggccggcg gatcgtcgac cattatgagc
     3661 tgggcggcgc ggccactgcc atcgacgcgg cggccgcggc ctgcgctggc aaatagggcc
     3721 gaggcgcact acatcgccgg tctgcttatg agcgccgaaa ccgccttgat gccgattccc
     3781 ggcatgaccg agcccgtgcc cgtcccgcgc gggcaggcgg ccgttcgtcg cgccgacggc
     3841 cggatcgacc tcgtcgggct gtccaaggag cagcttcgct ccacgctcga agggaaaggg
     3901 ctcgatgccc gccaggcgaa gcttcgcgcc aagcagctgt ggcattggat ctacaaccgc
     3961 ggggcgcgcg atttcgaacc catgaccgac gtcgccaagg cgcagcggcc ctggcttgct
     4021 gagcggttcg tcatttcgag gccgaacgtc gtggaagctc aggtctccgc cgacggaaca
     4081 cgcaagtggc tccttcggac cgacgacggc aacgagttcg aaatggtgtt catccccgac
     4141 gccgaccgcg gcaccctgtg cgtgtcgagc caggtcgggt gcacgctcaa ctgccgcttc
     4201 tgccataccg ggacgatgcg gctggttcgc aacctggagc cgtcggagat cgtcggccag
     4261 gtgatgctcg cgcgcgactc gctcggcgaa tggccgagcc aacccgaggg ccggatgctc
     4321 accaacatcg tgatgatggg gatgggcgag ccgctctaca atttcgacaa tgtccgcgac
     4381 gcgctgaaga tcgtcatgga cggcgacggg ctcggcctgt cgaagcggcg gatcacgctg
     4441 tcgaccagcg gcgtggtgcc gatgatggag cgcgccggcg aggagatcgg ggtcaatttg
     4501 gcggtcagcc ttcacgcggt ccgcaaggaa atccgcgacg agatcgtgcc gttgaaccgc
     4561 aaatacggga tcgagcagct gctgcagtcc tgcgccgatt atcccggggc gaacaacgcc
     4621 cgccggatca ccttcgaata tgtgatgctc aaggacaaga acgacagcga tgaggatgcg
     4681 cgcgagctgg tccggctgat ccgcaagtac aagcttccgg caaaggtcaa cctgatcccg
     4741 ttcaacccgt ggccgggggc gccctacgaa tgctccaccg aggagcggat caggtcgttc
     4801 agcaacatcg tgttcgaagg cggaatatcc gcccccgtcc ggactcctcg gggccgcgac
     4861 atcgatgccg cctgcggcca gctaaagacc gcttccgagc gcaagcggaa gagcgccgcc
     4921 ggctgacggg tggactggcc cgccgcctca ggattaaggt cgcggtcgat agtccactga
     4981 caggattccg ttgatgtcgt tgatcggaag aatgatcgga aagctgctca agcaaggcag
     5041 cctcaccctt gtcggtcccg acggcaagcg ggaaacctgc ggtcccggcg gcggcaagca
     5101 tctcacgatc cgctttatcg atcggcgggt tccgttcgat atcctgaaaa atccgcgcct
     5161 cggaatgggc gaagcctata tggagggacg ggtcgtgatc gaggatggcg acgttctcga
     5221 acttctcgag ctggtcactc gctcgaaccg ctgggaagac ggcggcgagg gccgcaagat
     5281 ctatgggaag agcaagctca agcagtttca ggcgctgttg cgccgcaacg atccccgccg
     5341 ctcgcggcgc aacgtcgccc atcattacga tctcgggaac gagctctacg agacgttcct
     5401 ggacgaggac atgcagtaca gctgcgccta cttcaccgat ccgtccaact cgctcgagca
     5461 ggcgcagatg gacaagaagg cccacattgc cgcgaagctg tacctgaagc cgggccaaag
     5521 ggtgctcgac atcggctgcg gctggggcgg gatggcgctt tacctgcaca aggtcgcgaa
     5581 ggtcgacgtt cttggaatca ccttgtccga gcgccagctg gcggtggccc ggcggcgagc
     5641 ggaggaagcc ggggtcggcg accacgtgcg gttcgagctg gtcgactatc ggcagctgca
     5701 gggcaagttc gatcgcatcg tctcggtcgg catgttcgag catgtcggcg cccgcgacta
     5761 tcagcagttc ttcgccaaat gcagcgagct gctcgaccgg cagggagtta tgcttctgca
     5821 caccatcggc cgtctcggct cgaccagcgg tgccccagac ccgttcaccg acaaatatat
     5881 ctttcccggt taccacatcc cggcgcttag ccagatgagc gccgccagcg aaaaggcccg
     5941 cctgatcgtc agcgacgtcg aaacccttcg cctccactac gcctatacgc tccgccactg
     6001 gctgcagcgc gtccgcgaca accgggccaa gatcgagggg atgtatgacg cccgcttctt
     6061 ccggatgtgg gaattctatc tcgccggcgg gatcgtgatg ttcgagaacg gggcgggctg
     6121 caattaccag gtccagtatg tccgcgaccg ctccgccctg ccgatcaccc gcgactatat
     6181 cgccgaggcg gagaagcggc tccggcgcaa gagcaacggg gcgaaggaga aagcgtcgcc
     6241 accaccgcgc cgaacgtctt caaaacagac cgtgccggcc tgactggcct acttgccctt
     6301 tagctcggcc agcagcgccg gcgctggata gatcactttc aacgcctgct cgatcgcggc
     6361 ggtggacacc gcgatcgacc tcgccatctt gctgtcgtag gcgtaatcgt tcctcagacc
     6421 gtggatgttg cggtcgaaat tggccccgat gacggcgccg ttccggtcga tcactggcga
     6481 tcctgaattg ccgccgatcg tgtccgccgc atagacgaag tccagcgtgc cttccggatc
     6541 gatgctgctg cgcttggcga cgaaagcatc ggccagcttg aacggctcgg cgccggtcgc
     6601 ccgcgcgaat gcgcccccga agcgggtccg gtaatcggtc ttgcggccgt tctccaccca
     6661 gccgccgacc ggcccgtagg tgatccgaag ggagaaggtc gcgtcgggat agacgctgtc
     6721 gccgtaggct gcgaagcggg cgtcggcgag cttcgcgcga gcttcggtca gcggcgcatc
     6781 gacctgctcg tccattatcg tccgcaagcg ccgatcattg gcttcgagcc ggcgcgcgta
     6841 aacgatcatc gggtcgttcg acgcttcgac cgccgtcctg cctccctccc acagcgcctt
     6901 gcgcaccgca ggatcgtcga ggcgggtgcc ggcgacgaga cgctgcgcca gcccctccgg
     6961 cgcttcggag ccgagcagca ggcgggtctg ggcgtgatcg gcgccgagat attcccgcgc
     7021 cttcgacagc gaccattcca tcagcagcgt ttcgagccag cgcgctatcg gcttggcatc
     7081 gagcagctgc ttctctttca gcggtagagc gctgtcgctg tagccgggaa gccgctcggg
     7141 attgggcttt gcgcgctcct cggctgcacg caccagggtg aacgcatagt cgaacagctc
     7201 gcccctcgga gtggcgaacc gccattcggt gtcgattgca cgaagcgccg caaccgcgcg
     7261 gtcgacttcg ctccatggat cgccgaaccg atttcccgcc ttcgcccgca actccgcttc
     7321 gcgcgctgcg agctgggcgt tgaatgccgg gtcaacgagc gcccgcgtgc ggccgatcgt
     7381 gcgtttcagg ttgttttcga ccccgaacag agtctgcttg ccttcgcgtt tgcgctcgtc
     7441 gttctgcttc atcgccgaga tcagtcggcc gcggagctcg gaatcgatcg ccagcgtgat
     7501 cgggagattg acctcgcgct gataggcgta ctggctcaac gtcagcatcc gctgagtcga
     7561 gccgggattg ccgacgacga agattagctc gccctccacg ggatcgcggc cggtccactg
     7621 caaatgctgc ggcgtcgaaa tgggcttccc gttctcataa gcgcgaagga atgcgccatc
     7681 gagcgcgtag cgggggaagt tgtagttgtc ggggtcgcca ccgaattcct gcgccgctgc
     7741 ttcgggtgcc caaacgacgc gaacgtcgct gtacttgcga tatttgtaga gtttgtactg
     7801 accgccgccg tacagcgtga ccacctggca gcgtgtcgtc accgtgtccg gacagccgtc
     7861 cttctcgatc gtcgcgatcg cggccgtgcg cgccttgacc gcagcctcgc ccttggctcc
     7921 cccgatcgcc cgcttcacct gcggcgtgac gtcgcttatc tgggtgacga cctcggcctg
     7981 ctggccggga cacattttct cttccgcccg gctggaggca ttgaacccgc gggcgaggag
     8041 gttcgcttga tcggtggaca ggtcctccag gcaggaggcg acgcaatgat ggttggtgaa
     8101 gatcaggccc gagtccgaca cgaagcttgc cgagcagccg cccgtcaggc gaaccgaggc
     8161 ggcccgaacg cgatctagcc acgcctggtc cggcgcccat ccatattcgg cgcgcagcct
     8221 ttcgaaggga aaagcgtcga acgtccacat cccctcgttg gcgctggccg cggtgaatgg
     8281 aaccgccacg agtccgaaca gtgtcacgta gcgtgcgatc gccatttcat tttcccttgc
     8341 ccacgaagcc tgtgccgaat tcgtgcacga aaaaaggccc ggcgcaagca ccgggcccga
     8401 attcgcaggg tcgatcagcg acggccgtgg tggcccttca ttagtcggtg gcccgagcgc
     8461 atctcctccg gcgtcagcga gccgtcgcgg ttggcgtccg ccttgtcgaa atgcgctgcc
     8521 gcggcagccg ttgcctccgc cagcgagacc cgtccgtcat tgtccgcgtc ggcggttgcg
     8581 aacatgtggc cagccattcc agccccgctc atcatccgga tgcgcttgcc cccaggctgc
     8641 gccatgtgcc ccgccatcga ctgatgggcg gcgtcgaact cggcgcgact caccgagccg
     8701 tccttgttgg cgtccatgcg gtcgaacatc tccggcccgt gctgctccat acgctggccc
     8761 atccgctgct tcattcgttc gcgcatggat cctcgggccg cttccatttc ggccttggtg
     8821 acgaagccat ccttgtcggc atcaatcttg gcgaaatgag cctgcacctt ctgcaccagt
     8881 gcatcgcgag tcatcggttc catcgtcatc ttgggatgct cggctggcgc cgactgccca
     8941 atcgccggag aaacggcgat cgccgcgact gccgccgccg aaagaagaag tgccttcatt
     9001 gaattcgcct ccagtccagt gtcgctcttc ggctagccca cgctcgctgt atgcttgttg
     9061 aatgcagaga cgcttgcggg cagaggcatg gatcatgggc cggggcgaaa tggctgacaa
     9121 gggcggcgag ggaggagttg cgtcgagatc ggcgcgcgac tggtgggagc gcccctattt
     9181 cctcgtcctg attgtcgcct tgtcggcggt gcccttgctg tacccggata tcccgccgct
     9241 ggtcgacctg ttcgggcaca tggggcgata tcgcgtccag ctcgacatcg gcaattcgcc
     9301 gtggctccgc gaatattacg gcttccactg ggcggcgatc gtgaatctcg gcgtcgacct
     9361 gctggtgatg ccgctcggcc gactgatggg gctggagccg tcggtgaagc tgttggtcgt
     9421 tgccataccc ccgataaccg ttgccggttt cctttgggtg gcccgtgagg ttcacggtcg
     9481 aatcccgccg accgccttct tcgcaatccc cttcgcctac ggtcacccgt tcctattcgg
     9541 cttcgtcaat ttcggcctgt cgatcgcttt cgccttcctt gcgttcggtt tgtggctgcg
     9601 gctcggccgc ctcgatcgga cccggcttcg ggcatggctg ttcgtgccca tctcgctcgt
     9661 catcttcttt tgccacacct acggttgggg cgtcctcggg ctgctctgct tttcggccga
     9721 ggcggttcgc cagcatgatc gcgggatcgg ctggatcaag gcggccgtag cggctgccct
     9781 ccatgcctct gtcatggcgc tgccgctgtt ggtcatgctg atctggagga gcgagaccca
     9841 cggcggggcg actgccgact ggttcaactg ggaggcgaaa tggcggtggc tgctgatggc
     9901 gctccgcgac cgctgggaat ggtgggacaa aggggctttg atcgtctgcg cggcggtctt
     9961 cctgctggcc gcgtttcacc ggtcgctcgc cttttcgcga aaccttgcct tttccgcgct
    10021 cgtcctcgcg gtcggctaca tcctgcttcc acggatcatc ttcggatcgg cttatgccga
    10081 tatgcggctc gttccctacg cccttgccgt tgttctcctc gcgattcgct ttcgtgacga
    10141 cgtccggccc cgtttcggat cggcgctggc ggcgctgggg cttgcgttcg tcctcgcccg
    10201 cctggccggg acgacggcga gcatgacgat tgctgccaat gaccagcagg caaagcttgc
    10261 ggcactcgac catgtgccga tgggcgcgcg ggtcgtcacg ctcgtcggcg atccgtgcgg
    10321 ctactcctgg ccgttgccgc ggaacagcca cctcggggcg atggtcgtgg ttcgaaaaca
    10381 cggcttttcg aacgaccagt gggtcatgga ggggttgaat cttctcgacc ttcgctatcc
    10441 cgaggccggc catttctctg ccgatccttc gcaacgcgtc cgcccgcagg gctgcggagc
    10501 cgggactttg tggacgatcg accgggcgct gcgggaggta aaccctaggg cattggacta
    10561 tgtctggctg gtcgatcccc cgccattcga ccgctcgatg acggcggata tggaaaccgt
    10621 ctggcgcgga cccggctcga tcctctatcg gctgcgctga tgccgaagct gtcgatcgtc
    10681 gtaccctgct acaatgagga agcgtgcctt cgcaccttgc acgagcggct ggccgccgcc
    10741 gcgcgctcga cgttcgccga cgattacgag atcgtcctcg taaacgacgg atcgaaggac
    10801 tcgagttggc cgatcatgca agaaatggcc gcggcagatc cgcacgttgt ggcgatcaac
    10861 ctctcgcgca accacggcca ccagctcgcg cttaccgcgg gcctcgacct tgcgcttggc
    10921 gagctcatcc tggtcatcga tgccgacctc caggacccgc ccgagctgct tccggcgatg
    10981 gtcgacacga tgcgggccga aggcgccgac gtggtctacg gtgtccgcaa gagccggagc
    11041 ggggaaactg cgtttaagcg agccaccgcg catggtttct accggctgtt gtcgcgagcg
    11101 accgacgtcg acattccgct cgatgccgga gacttccggc tcatcagccg ccgcgcgctc
    11161 gacgtgctcc tgtcgatgcc ggaacaggcg cgattcattc gcgggatggt cgcctggatc
    11221 gggttcaggc aggtgccgat cctctacgat cgcgaacagc ggttcgccgg cgagaccaaa
    11281 tatccgatcg cgaagatgct tcgcttcgcg cttgacgcct tgaccggctt ttcgtcggcg
    11341 ccgctcaagc ttgccagtca cgcgggcttc gctttgtcca tcggttcggt ggcgatcatc
    11401 ctctacatcc ttgccggctg ggcggcgggc cggagcattc ccggctggac gtcgctgatg
    11461 ctggtggtcg ttgttctcgg tgccgtgcag atgttcgttc tcgcactcct aggcgaatat
    11521 atcggccggc tgtacaacga ggcgaagggc cggccgctgt acatcgtcca ggagattgcc
    11581 ggcggaggcc ggcgggccgg ccggctcggt caggtcgccg aagccagcgc gaacagcgac
    11641 agccccggcg gcaaggggac cctgccgatc agccgccgct cggccgcgaa gcagcgctcg
    11701 aagaaataat tgaccggttt gggcggcagc ttgtcgtccc ccccgccgcg tccggccagc
    11761 ttcgcggcaa ggcgagctcc gacggcgaag gggaagagga cgctgttgaa atatccgatc
    11821 gcgtcgagcc gaagcggcga ttcctcgatc aggcgcttta gcgatcgctt ggaatagcgg
    11881 cgcttgtgat ggttgaggtc gtcgtgcgcc gaccacatcc actggtgcgc ggggaccgtg
    11941 acgagaagcg tgccgccggg cttgaggcaa gaggccaggg tcgcgatcgc ggcacggtcg
    12001 tcgtcgatgt gctcgacgac gtcgagcgct gcgacaaggt cgtaatgccg gcgctcgatt
    12061 cccggcaact ccggcagcgg cgccggcgaa atttccctcc cgagccgctt ttccgcgaca
    12121 gcgcgcgcct cggcgtcgat ctcgatgccg tcggaccttc cgaaccggtc gagcatcttc
    12181 aaattgtgcc cggtcccgca gccgacctcg agaatccggg cttgctccgg aagcgcgatc
    12241 ctccgccgga tgagggtttc caggacctcg cgccgcgcgc ggtaccacca gtgcagctcg
    12301 tcgagctcgg ccatgcggtc gtagatcagc cgctccatca gcggaaaacc cactcgcggt
    12361 taaggaagaa ggtgacagcc ggggtaacga aggccatcgg caggatcggt accgccgggc
    12421 caaaaccgaa gtaggtgaat agcagccaca cccaaaagct gtttagggcg tagctgatga
    12481 gcgaaacgac gacgaacttg gctttcgtcg catgggtccg ttcgccgccg tgcccgcgaa
    12541 agctccagat gctgtgcatg ttgtaaccga cggccgtcgc ggtgaggtag gcgagcagat
    12601 tgccgagctg cgggtgccag ccgagcacca gcgcgaccag cgcatagaca ccgataccta
    12661 tcgcagtgac gaacgctccg gtgatgacga agcgaacgag ctgattgagt accgaccggc
    12721 gcttggggtg gaggttgtgg atcacacgct ttccgctgcg gctggaccgc cgcttgttct
    12781 ttgcctttca gcggctacag cgcgaaacat gctcaagcgc aaggacgact tgccggtgga
    12841 tcgcatcctc gcgttcctcg aacggcactg gaaattgatc acggtcgccg cctggctgct
    12901 gttctgcgcc tggttcctgt acacgcgatg ggcgaacgcc atcgcgttca gcctcagcga
    12961 taccgacgac aatatgcgca tgatgcaggt gcgggcgctc ctgaacggcc aggactggtt
    13021 cgacctgagg cagtatcggc tgaacgcacc ggtcggcgcc gacatccatt ggagccgtgt
    13081 ggtcgatctc ccgatcgccg cgatcatgct cctgacccgg ccgttcgtgg gcggtgcgga
    13141 ttcggagagg atcgctgcgg cgctggcgcc gatgcttccc tatctcgtgc tgttgttcgg
    13201 agtcgccctt actgcgcgcc ggctgatcga cccgcgcgcc ttcgcattgc ccatcatcgc
    13261 catgatcgtc gccgggctga cgaacgggat gttcatgccg gaacggctcg accaccacgg
    13321 ctggcagctc gccctcgtcg cggtcggcac tgccggattg gcggacccga agcggctaag
    13381 gggcggtctt actctcggaa tctcgaccgc gctgtcgatt gcgatcggtc tcgagatgat
    13441 catctatctg gctgtcgcgg gagcggcggt cgcgttgttc tgggtcgccg atgcgggcga
    13501 gcgccggcgg gcgctcggct atgcagtgag cctcggcggc gcgctcgctt tctccttcct
    13561 ggtcttcgcc tcctatgcga accgctccgc ggtttgcgac gcgctgtccc cggtctggct
    13621 gtcgtcgctg ctcgtcgcca gcgcgctttt gctactgctc gcctggctgt cgccgcccga
    13681 ctggagaatg cggctcggac tggcggtcgg cgcaggagtc gtcgtcgggg ccttccacgc
    13741 actgatgtgg cccaactgcc taacccggtt ggaaggggtg tctcccgaag ttgcagacct
    13801 gtggctgagc cacgttcgcg aggcccggcc ggtctggcgg cacggctgga ggatcacgag
    13861 cctgatcctc gcactgccgg tgactggaac gatcggttgg gcgttgctgg cgtggcgtaa
    13921 ccgggccgac cgcgatttgc ttaggcgcac gcttgctgca tgggcgccgg cgctgatcgc
    13981 aatgctgctg cttggctggc agacccgaac cggccccgcc gcgcaaatgc tcgccgtcgt
    14041 cggcgcggtg gcgatcgcct ggatactggt gccggtcctc gaccgcgccg gcagtccgat
    14101 agtgcggacc cttggagtcg ctgctgccgc actggtcgga tttggcgctg tggtccccgt
    14161 cgggctgaat ttcgccccag ccgaccgtat gtcgccccgg tcggcacaaa tcgagcgagc
    14221 gaaccgatcg tgcaatttca tcggatccta tcgtcccgtc gctcttcagc cgaaggggac
    14281 cgtcttcacc ttcgtcgact acgcgccgag gctgatcacg ctcacccatc acaatgcgat
    14341 catgggaccg taccatcgca acggcgagca gatcgccgac acgatgaagg cattccgcgg
    14401 agacgccgac caggcgcggc ggatcttcag gaaatatcgc gctgattacc tgctaacgtg
    14461 tcccaactcg tcgacgacga cgatcttcct gtcggagact ccgaaaggct tttacggcca
    14521 gctcgcgaag gggcaggtgc cgaactggct gacgccggtg aagctaccgc cagactctcc
    14581 gttcaggatg tggaagatcg agcgctagag gctcggaaag ctttcgcgaa ggccgtccac
    14641 cacgaattgc gccgccagcg ccgcgaggat gactccgagc agtcggctga tcatcgcttc
    14701 gatacgctcg cccatcagcc gcatcagcca tccggcggat agcagcgagg cgccggtaat
    14761 cgcgactacc agcgtcatcg ccgcaagcac tgcgccaatt tccacatagt tgtccgcgcg
    14821 cgacaccagc agcatcgcgc ttgcgatcga cccgggcccg gcgatcatcg gaatggccat
    14881 cggaaaaacg gaaatgtcct cggcttcggg cgtgccctcg atggattgcg cccgttcctc
    14941 gcggcgttgc gtgcgctttt cgaacaccat ctcgagcgcg atgaagaaaa gcatgatccc
    15001 gccggcgatc cggaagcttc cgagcccgat tccaagcgcg tggagaagcg gctgcccgaa
    15061 caggccgaag atcatcagga tgaaccaggc gacgacggca gagcggatcg ccatcgctcg
    15121 gcgatgggca gcggggtcgc cccgcgtcag cccggcgaaa atcggcacgc accccggcgg
    15181 gtcgatgatc accaggaagg tgaccagcgc cgatccaaat agctcgatca cagcccctcc
    15241 gggtcgggca ggccggcgcg ccggttggcg gcgaccaccg tgttgcgaag cagcatcgcg
    15301 atcgtcatcg ggccgactcc gcccgggaca ggagtgatcg ccgacgcggc ttcggccgct
    15361 tcatcgaacg cgacgtcgcc gaccaggcgg ctcttgccct cctctgcggc cgggacccgg
    15421 ttgatcccga cgtcgatgac gactgcgccc ggcttgatcc agccgccacg aaccatctcc
    15481 gggcgaccca cggctgcgac gacgatgtcg gcgcggcgca cgacgtcggg caggtcgcga
    15541 gtgcgcgaat gggcgaccgt cacggtcgcg ctttcgccga tcaggagcat cgccatcggc
    15601 ttgccgacga tgttggagcg gccgatcacc acggcgtcct tgcccgagat gctgccgagc
    15661 tcatgcttga gcaggtacag gcatcccaaa ggcgtgcatg ggaccagggc ttcgaggccg
    15721 gtggcgagac gcccggcgtt gaccggatgg aagccatcga cgtccttggc ggggtcgatc
    15781 gccgcgatca cccgcgcgga atcgatgtgc gagggaagcg gaagctggac gagaatgccg
    15841 tctacgctgt cgtccgcatt cagccgctcc accaggtcga ggaggtcggc ctcgctcgtc
    15901 gtgtcaggga gcttgtgcga taagctctgc attccagctt cggcagtcgc cttgcccttt
    15961 gagcggacgt aaacggcgct tgccggatct tcgccgacca gcacggtcgc gagccccggg
    16021 gcgcgtcccg tcccggcctc gaagtcggcg gcggcggcgg cgaccctttc gcgcacagcc
    16081 aaggcggcgg cgcgtccatc aatccgcctg gcggtcatag catcgcggaa gtcaggctgc
    16141 tttcggcccc gtcgagcagc atttgcacca cgttgatcag cagcagcagc accagcggcg
    16201 aaaagtcgat gccgccaaaa tcgggaagga ccgcgcggat cgggcgatac agcggggcgg
    16261 tcagccggtc gagcgcatgg acgaacgttc gcaggccctg agagctcgtg ttcagcacgt
    16321 tgaatgcgaa cagccagctg aggatgacct ggatgatgat gacccacatc aggatccaga
    16381 ggagataatg ggcgatattg aaaagggcgt ggagcattgg cgcggcttag cggcgccggt
    16441 cgcggtgggc aatcatggcg caaagcggtt cggctgcgcc tccgctagga cgatggagaa
    16501 gtccgcgctc gaatcctccc attcgcgaag cggagtccag ccgccggcga gaagcaaaag
    16561 ccgggctccg cggcgctcgt acttatggct gttctcggtg tggatcgact ctccctttgc
    16621 aaaggagaat ggcttcccgg cgattgtgaa atcgacgtcg cggaccgcga ccaggtgcat
    16681 ttcaatgcgc gataggatgt cattccagcg cgcctcgtga cggaaggcgt cgagcgggat
    16741 gtcgccgtcc agttcgcgat tgatccgttc gagcaggttg agattgaact gcgcggtaat
    16801 cccctccggc tcgtcataag ccgcaaccag ccgctcgatc ggcttcaccc ggtccatccc
    16861 gatcaggagc agcgatccgg tgccgagcaa ctcgcggaag tgccggagca ggtcggtcgc
    16921 gcttcgcgga acgaaattgc cgatcgtcga gccgggaaag aagccgagct ttggaagggg
    16981 cgctactacc gacggaagct cgaagggtcg ggcgaagtcg gcggcgaccg gatggaccgg
    17041 aagagtcgga aaacgcttgc gaagttcctc cgcgctcaat tcgagatagt cggcggaaat
    17101 gtcgaccggg acgtaggccg ccggagcgat ggcttcgaga aggacaggag tcttggtcgc
    17161 cgaaccggcc ccgaactcaa cgaccgccat gcccggggga atggcttcgg cgagctcggg
    17221 cacgatggtc tcgaggagcg tggtttcggt tgcggtcgga tagtaagtcg ggagccgggt
    17281 gatctggtca aacagctcgg aaccgcggcg gtcgtacagc caacgcgcag ggactgcagg
    17341 gatcggctcc gaaagcccgg aaagcacgtc ttcgcggaac ttggggtcag cagtctcggg
    17401 caagccttag ccctgtgaat tgccagcgcg ccgtcggcgg gaagaaattg cgataggttg
    17461 ctcgcgaatg tccgcgcggc gtcgcgcagc ttgcgccttt gagcacgagc tgtccgctca
    17521 tgaacttccc gttatactcg ccgacagtgc cgtcggcggg gcgaaagccc gaataggacg
    17581 cgaacgcgct ttgggtccat tcccagacgc ttccgaaaaa cccgctcttc gagcgcggga
    17641 cgaccgctcc agcccgatcg agctgctggc cagacgacgc gtcgtccaat tgcgccgcgc
    17701 tttcccactc ttcttcgcgc gggagccggg cgcctgccca gcgggcgaaa gcctcggcct
    17761 cgaaatagct gatgtgcgcc accggcgcgt cgggatcgcg ttcgatcggg ccggcgagcg
    17821 tgaaatgggt cccgtccttt tcccaataga gcggccgctc gatcgcttcg cgctgaaccc
    17881 actcccatcc ctccgacagc cacaaggtcg cggtgcggta gccgcggtct gcaatgaact
    17941 tgtcccaatg ggcattggtc accggagcgg cggcaatctc gtgcgggtga agcaggtcgc
    18001 ggtgccgcgg ccgctcgtga tcgaaggcaa atccggagcc agttgcgccg atctcgacga
    18061 tcccggtgcg gccctcgatc cacctttccg cggcttggca gctcggctcg cgggcgcttg
    18121 accttccata ggcgggctgc agcgggtttt cggaaaaggt cgcgaggata tcggtgagca
    18181 gaagctcctg atgctgctgc tcgtgattga ttcccagctc gacgagctcg agctcgtccg
    18241 ggccgaaaga gggcagcgag tcgaggagga tctcgtcgac ataagcgcga aaatcgcgga
    18301 tttcgtccag cgaagggcgg ctcagcattc cgcgtttggg gcgcgggtgt cgcggcccct
    18361 cgccctcgta atagctgttg aacagatagg cgaaccgctc gtcgaacggc tcataaccct
    18421 tcacctgagc gcgaagcacg aaagtctcga agaaccagct ggtgtgcgct aggtgccatt
    18481 tcgccggcga ggcgtcgggg aacggctgga ttgtcgcgtc ggcatcggaa agcggtgccg
    18541 caagatcggt ggtcagggcg cgcgtcgccg aatagcggtc cgcgagcgtg gagaagcggt
    18601 tgtctagcgg gttgcgccgg gttgccaaag cacgtctcct ccctggtttg ccgcaaccag
    18661 gcgcgctgcg acgaacaggt ggtcggacag tcggttaaga taggcgagcg cgtccgaatt
    18721 cacatcctcc gcctgagaca gcgccaccgc cgagcgctcg gctcggcgca cgaccgtgcg
    18781 cgctaggtgc aaggcggcga cttctcgcga tccgccgggg aggatgaagc tccgaagcgg
    18841 ctcaaggcct tcgttcatcc cgtcgatttc gcgctcgagc cgctccacct ggctggcgac
    18901 gattcgaagg gcgccctcca cgtctccggg cgtggcgatg tctgcgccga ggtcgaacaa
    18961 ctcgttctgg attcgccgca gctcttcgga catggcatcg tcgctgagca gtgcgattgc
    19021 ggctccgacc gcggcattcg cctcgtcgac gtcgccgatc gccgccatcc gcgcgcttgc
    19081 cttgctcact ctcgatccgt ccacgaggcc ggcggtgcct ttgtcgccgg tccgcgtgta
    19141 gatcttgttg agcttgacca tcagcgcccg gcggcgccgg cgagcataag gatcaggatc
    19201 acgatgaaaa tcgcgactgc ctggaacagg acgcgctttc gcatccactg ctgctggcgc
    19261 tcgctcgatc caacgcggcc ctgagccatg gtgacaaccc cgcggacgag gacataggcg
    19321 gtcgcagcca tggcggcgac cagcagaacc agcaggacaa tcgtcatggc gcctatttag
    19381 gcatccgcca gctgaaagcc agcagggagc cgtccctcga ccagctgttc cgcaagtcgg
    19441 cggccgtcga ctccattctc ccgcatcgcc gcaagcgtgg gcgcccggtc ccgcttggcc
    19501 aagcggcggc cgtcctcgtg aacgacgagg cgatgatgaa ggtaggttgg ctcgcgcagc
    19561 gcgagcagtg cctggagcag gcgctggacg ggagtcgagg aacgaaggtc gctggcgcgg
    19621 acgaccaggg taacgccgct cgccgcatca tcgacgacgc acgccaggtg atagcttgct
    19681 ggcgcgtcct ttcgggccag aatttcgtcg tcgatgtcat cggcagtcgc gcaaaagccc
    19741 ttgccgtcga attccgtcca gccgggaagg ccgaccgccg cgaccgcctt cgccgaatca
    19801 agccgccagc tgtgcgaggt ggtcgcccgg cgctccgggt cgtccggaag gttcctgcat
    19861 gttcccgggt accgcggccc caccggtcca tgcggcgcgt tgagcgcagc cgcgatgtcc
    19921 gagcgcgtgc agaagcaggc atagaccagc ccctgggccc ttaaccgctc gagagcctgc
    19981 gcataaacct ggctccgctg cgactgaacg aggggctcgg cgtccggatc gagcccgagc
    20041 cagcgaaggt tttcgtcgat gccggcgacg aactcgggac ggcttcgcgt ctggtcgagg
    20101 tcttcgatgc gaagcaggaa atcgccgctc gcctcgcgcg cagcgtgatg cgccaatgcg
    20161 gcgctgtaag cgtggccgag atgcaacttg ccggtcggag atggagcgaa acggctggtc
    20221 agcatctcac ccgcacttga cccggcgttg ttggaagtgc tgtcataggc atgtcacgcc
    20281 gggatggcat ccggctgggc acaagggaag acgggcccga cgagaccctt ctcctccttg
    20341 cgtgcgacag ggccgggggt tggaagcggg caggacgagg aggtcattgc ccgagccatg
    20401 gatcaccccg agacgatccg ccacccggaa agctgcccgg cgctcgtgct caatgccgac
    20461 tacacgcctc tgtcctattt cccgctgagc ctgtggccat ggcaaacggc ggtgaaggcg
    20521 atgttcctgg agcgggtcga cgtcgtcgct cattacgacc gcgaagtgca cagcccgacg
    20581 gtggctctga agcttccgtc ggtcatcgca ctccggcaat tcgtgcggcc caacgcctat
    20641 cccgctttca cccggttcaa cctgttcctc cgcgaccgat ttcgctgcgt ctattgcggg
    20701 tcgaacaagg agctgacgtt cgaccatgtc gttccgcgcg cccagggcgg ccgaacaact
    20761 tgggagaacg tcgccaccgc ctgtgctccc tgcaatctca agaagggcgg ccgcaccccg
    20821 cgccaggcgg ggcttcacgt cgagcgcgag ccgatccggc ccaccagctg gcaattgcag
    20881 gaccacggcc ggagcttccc gcccaaccac ctccacgaaa cgtggcgcga ctacctctac
    20941 tgggatgttg agctgacgcc ctaagcgcgg cttcggttta gctggccgtt aaccattttc
    21001 gttcagatac gcggccgatg gaaacgactg gccaaattcg gaacggcggc gcgcagccgc
    21061 gactgctcgt gatcgattcg aaccgctcct atctcggcgt catcgcacgc cgcctggcgg
    21121 aattcggtta tcgtgtcgcg accgcggaca gcgctcagtc gggacttgcg gagatgtacc
    21181 ggattccggc cgatctcgtg ctttgcaccg ccgatcttcg cgggacgacc ggtatcgagc
    21241 tcgtgcgcag ggtccgcgac gatcccgtgc atcgcgacgt tccggtgctg cttatcgtcg
    21301 gccgctcgga tcccgcggcg accgtccgcg ctttccaggc cggagccgat ggagtcatcc
    21361 gcaagccctg ccatttcgaa gtgctcgccg cctgcgtcgc acggcagctc gctcgcgcgg
    21421 acgcaatgaa gcacctagcc agcgacaaag cggcgctgga tgcgaaaatc gtcagccgcg
    21481 taatcgagct tcgcgagacc caggcccagc tcaacgccgc ggaaaaggaa cggcggaggc
    21541 tcgccgcgat tgtccgcgaa agggcggcct agagcccttg gatgtagtcg cggacggttg
    21601 gcgcgacatc ctcgcgacca agc
//
LOCUS       DATAKH010000089         2027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20654,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000089 DATAKH010000000
VERSION     DATAKH010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20654"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            321..944
                     /locus_tag="VHN55_03635"
     CDS             321..944
                     /locus_tag="VHN55_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008832481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEX2803062.1"
                     /translation="MSIYFHEEDLPQDVAFADGPIAVDTEAMGLFPGRDRLCLVQLSD
                     GRGDEHLVRFAVGSDYSAPRLKALLADRDRLKLYHFARFDLAIMSKYLGIVAGPVYCT
                     RTASRLVRTYTDRHGLKDLVKELLGHELSKQQQTSDWGAPEISDAQREYAASDVRYLH
                     ALKEKLDERLQRENRTALVQGCFDFLPCRALLDVAGWADQDIFAHDG"
     gene            959..1597
                     /locus_tag="VHN55_03640"
     CDS             959..1597
                     /locus_tag="VHN55_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEX2803063.1"
                     /translation="MPEAAARGREVRQHWAVPGSKHDRLIRIAKVALPVAVGVLIAFL
                     ALAPLDRSGDVSFILDKNKVDNAPERMRVDTARYTGEDNEGRRFEVVARSAVQQSSDL
                     PIVDIRGMLARLWLAQGPVTIVANAARYDIDRQLVKVLGPIRVAGPDGYRLATSDVSV
                     DLKAREVTGSGGVQGEMSLGRFTAGRLRADLAERKVVLDQGARLKITQGAVR"
     gene            1603..>2027
                     /locus_tag="VHN55_03645"
     CDS             1603..>2027
                     /locus_tag="VHN55_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HEX2803064.1"
                     /translation="MRRAILIAIAAASAAAAALAQAQEPVSALKGHDANAPVDVTAAR
                     IEVQDRADRAIFAGDVHVRQGQLTLDTERLTVAYASAGGIQIQRLDASGGVVVRSPSE
                     TARGNFAVYDLERKLITLVGDVQLNRGGSQILGSRLVIDL"
BASE COUNT          368 a          681 c          641 g          337 t
ORIGIN      
        1 ctcgaagcca ccgcggtcgc tgtaactttc ctcgaagaac ccgtcgcgct tgtctttgcc
       61 gcgaccgccg cggtcgccct tacgccctct gtcgaaaccc atgcccgtaa ttaatccttg
      121 tgccccaacc gactataacc aacgcgctgg gcatcaacgg cgcaaccggt cttcggcgtg
      181 cattttatcc acacaccgcc cacagcctta catgaaaaaa tgtgcgcgct ctagtgattc
      241 gtttgcgccc tgcgctaagg ctcggacaac cgccgggcag aagcgtactc agtgccggtg
      301 ccgaatcacg agggaagcga atgagcatct atttccacga ggaggacctg ccgcaagatg
      361 tcgccttcgc cgacgggccg attgccgtcg acaccgaagc gatgggcctg ttcccaggcc
      421 gcgaccggct gtgcctggtg cagctttccg atggcagggg cgacgagcat ctcgtccgct
      481 tcgcagtcgg cagcgactat tcggcacccc ggctcaaggc gctgctcgcc gaccgcgacc
      541 ggctcaagct ctatcatttc gcccgcttcg acctcgccat catgagcaag tatctcggca
      601 tcgtcgccgg cccggtctat tgcacgcgca ccgcctcgcg gctggttcgg acgtataccg
      661 accgacatgg gctcaaggac ctggtcaagg agctgctcgg ccacgagctg tcgaagcagc
      721 agcagaccag cgactggggc gcgccggaaa tcagcgacgc acagagagaa tatgccgcca
      781 gcgatgtccg ttacctgcat gcgctgaagg aaaagctcga cgaacggctg cagcgcgaaa
      841 atcgcaccgc gcttgtccag ggatgcttcg acttcctccc gtgccgggcg ctcctcgatg
      901 tcgccggctg ggccgaccag gacattttcg cccatgacgg ctagacgcgg agttcgtcgt
      961 gcctgaagcg gccgcccgcg gtcgcgaggt gaggcagcat tgggcggtgc ccggaagcaa
     1021 gcacgaccga ctcatccgaa tcgcgaaagt cgcgcttccg gtcgcggtcg gggtgctgat
     1081 cgccttcctc gcgcttgctc cgctcgaccg aagcggggat gtgagcttca ttctcgacaa
     1141 gaacaaagtc gacaacgcgc ccgaacggat gcgggtcgac actgcccgct acaccggcga
     1201 agacaatgag ggcaggcgct tcgaggtcgt cgcccgttcg gccgtccagc aaagctccga
     1261 cctcccgatc gtcgatatcc gggggatgct tgcccggctg tggctcgccc aggggccggt
     1321 caccatcgta gcgaacgccg ctcgctacga catcgacagg cagctggtga aggtgcttgg
     1381 cccgatccgg gtcgcgggac cggacggata ccggctcgcg accagcgatg tcagcgtcga
     1441 cctcaaagcg cgtgaagtga ccggcagtgg cggagttcag ggggaaatgt cgctcggccg
     1501 ctttaccgcg gggcggcttc gtgccgacct cgcggagcgc aaagtggtcc tcgaccaggg
     1561 cgctcgcttg aaaatcacgc agggcgcggt cagatgatgc cgatgcgccg cgccatcctc
     1621 atcgcaatcg ccgccgcttc cgcagcagca gccgccctgg cacaggcgca ggagccggtt
     1681 tcggcgctca aggggcatga cgccaatgcg cccgtcgacg tgacggcggc gcgaatcgag
     1741 gtccaggacc gggccgaccg ggcgatcttc gccggcgacg tccatgtccg ccaggggcag
     1801 ctaacgctcg acaccgagcg gctcaccgtt gcctacgcaa gcgccggggg aatccagatc
     1861 cagcgcctcg acgccagcgg cggggtcgtc gtcaggagcc cgtccgaaac cgcccgcggc
     1921 aattttgcgg tctatgacct cgagcgaaag ctgatcacgc ttgtcggcga tgtgcagctc
     1981 aaccgcggcg gatcgcagat cctcggatcg cggctggtga tcgatct
//
LOCUS       DATAKH010000090         5817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_17194,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000090 DATAKH010000000
VERSION     DATAKH010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5817
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17194"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VHN55_03650"
     CDS             <1..497
                     /locus_tag="VHN55_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HEX2803065.1"
                     /translation="WNLIGIGVAVGAVVIVVDELLRRTTRRYSLPALAVGLGIYLPME
                     LTLLVPIGALAGWLYNRWAQRQPNAAFAERIGTLMATGLIVGESLMGVAYAGIVAAAE
                     RAGSPNSGEVLAVVGDFGWAVPIGLVLFGGSIALLYAKTSRDAATAPILAEEPEIPPQ
                     ATPR"
     gene            complement(494..1510)
                     /locus_tag="VHN55_03655"
     CDS             complement(494..1510)
                     /locus_tag="VHN55_03655"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX2803066.1"
                     /translation="MAAARVAILGAGSVGCFVGGAWQAAGIPVGFIGRKRLAGDIQKH
                     GLTITTNAGWQRHFLPGEVDFGTNAAALADANIICVCVKSSDTAEAARDIAKHATARS
                     LIVSFQNGISNVDVLSRQLGDRFDVARGMVPFNCVYLGEGRFHKGVSGSPLVAEDRPA
                     LRKLSKRVADGPAPLDLSDQMLALAWGKLLINLNNATNALSGRPLLDQLRHRDYRRVF
                     AATMREGLRILNKAGIEPAKVGAVGPRLLPLVIDSPDWLFNSVFIRKWKIDAKARSSM
                     SDDLRQGRKTEVDYINGELVALAERIGVDAPLNRRIVELIRKAESGAPAMGPVALRRA
                     VLGP"
     gene            complement(1497..1943)
                     /gene="queF"
                     /locus_tag="VHN55_03660"
     CDS             complement(1497..1943)
                     /gene="queF"
                     /locus_tag="VHN55_03660"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011413352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEX2803067.1"
                     /translation="MDPKHLGKQSALPASPDEAVLDYVPNPRPGELYLVRFAAPEFTS
                     LCPITGQPDFAHLVIDYAPGDTIVESKSLKLFLGSFRNHGGFHEDVTVGIAKRLTDEM
                     KPRWLRIGGYWYPRGGMPIDVFWQSGPPPEGLWLPDQGVVAYRGRG"
     gene            complement(1954..2655)
                     /gene="ung"
                     /locus_tag="VHN55_03665"
     CDS             complement(1954..2655)
                     /gene="ung"
                     /locus_tag="VHN55_03665"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019370934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX2803068.1"
                     /translation="MATRQIKLHPSWLEPLRSEFGRPYMAALKQFLAEEKAKGRTIFP
                     RAANWFRALDLCPLDKVRIVILGQDPYHGEGQAHGLCFSVPPRVRPPPSLVNIFKELE
                     TDLGIRPSRHGFLEHWASQGVLLLNSVLTVEMGRAASHRERGWERFTDVVVQLVNARS
                     KPVVFLLWGNYAQKKAAFVDTSRHLVLKAPHPSPLSAHSGYFGCRHFSKANAFLEERG
                     LPPIDWALPEVAAAE"
     gene            2685..3521
                     /locus_tag="VHN55_03670"
     CDS             2685..3521
                     /locus_tag="VHN55_03670"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013848364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEX2803069.1"
                     /translation="MESLVSTQWLADHLGEPDLTVVDSSWHMPATGRIGRDEYLRAHI
                     PGARFLDIDEVSDQSNPAPHMLPDAQEFGEAMEAIGIGRDDRIVVYDNSPTRNAARGW
                     FMLRHFGARNVAILDGGFQKWLAEGRETEAGEPSQREANFDVAERAGEVVTKQQILEG
                     LDCPLLDARGRPRFEGAEPEPRAGLESGHIPGARNIPYSAIYRDDGTFRSRDELRRIF
                     TNAAADPDRPFVASCGSGVTAAALIFAAHLLGNDEARLYDGSWSEWGADPATPKELGP
                     AA"
     gene            complement(3518..3874)
                     /locus_tag="VHN55_03675"
     CDS             complement(3518..3874)
                     /locus_tag="VHN55_03675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803070.1"
                     /translation="MLHLFAHSPEPRPSERLRPEPVTRLASLRNALRAVDEFGGGPAD
                     DFDDELSERWESADEAARRCFDRRSAELVSVASAGLEAVSFQREQGIDASVAALRVIA
                     DELKAGLNDLHQVLNR"
     gene            complement(3910..4461)
                     /locus_tag="VHN55_03680"
     CDS             complement(3910..4461)
                     /locus_tag="VHN55_03680"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX2803071.1"
                     /translation="MPEETLSTRLVEIESMLDRSRRRFEEGSRLLEDAHNALAEIQQE
                     LIGSPASVSREESDEAASRLVTSLRASGGEMPESLCGGRLAVDQVQRLIRIDGNPIGI
                     TEMEYRVLELLAFARNNVVTRAMLLKHLYRRADDQPQPKIIDVFISKLRKKLRSAAGG
                     AEFIETIPQRGWILRDIAPEKAA"
     gene            complement(4490..4885)
                     /locus_tag="VHN55_03685"
     CDS             complement(4490..4885)
                     /locus_tag="VHN55_03685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006963899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3035 domain-containing protein"
                     /protein_id="HEX2803072.1"
                     /translation="MRKSLFLLLASAVALGGCAGRSAAPDEFAVARNAPLVIPPDFSL
                     TPPVAGTVTSTPQDAQQRAIEALFGGPAPRPLSETSMLDAAGRDRAALGIRSTVGDAE
                     TNIVDMGATTQAIIAAPQSDSDIASAQIP"
     gene            complement(4878..5378)
                     /gene="lspA"
                     /locus_tag="VHN55_03690"
     CDS             complement(4878..5378)
                     /gene="lspA"
                     /locus_tag="VHN55_03690"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014074876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEX2803073.1"
                     /translation="MRERQFGFSIALAIFALDQLAKWIVSGPLQLQSVGQIYVLPFFN
                     LTWTENNGISLGLFNATTDLGRWMLVAVTSAIAISVAVWIGRERSRWDQAALGMILGG
                     ALGNILDRVRHGYVVDFADLHFGAFRPFLIFNIGDAAIVIGVVILLLRAFLVRSENPE
                     ESVTNA"
     gene            complement(5371..5817)
                     /locus_tag="VHN55_03695"
                     /pseudo
     CDS             complement(5371..5817)
                     /locus_tag="VHN55_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007012679.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
BASE COUNT         1024 a         1886 c         1931 g          976 t
ORIGIN      
        1 actggaatct gatcggcatc ggggtcgctg tcggggcggt agtcatcgtg gtcgacgagc
       61 tgcttcgccg gaccaccagg cgctacagcc ttcccgcact cgcagtcggg ctcggcatct
      121 acttgccgat ggagctgacg ctgctggtgc cgatcggcgc gctcgccggc tggctctaca
      181 accgctgggc gcagaggcag ccgaacgccg cattcgccga gcggatcggc acgctcatgg
      241 cgacgggcct gatcgtcggc gagagcctga tgggggtcgc ctatgcggga atcgtcgccg
      301 cggcggagcg ggccggctcc cccaacagcg gcgaagtgct cgccgtcgtc ggcgacttcg
      361 gctgggcggt cccgatcggg ctggtcctgt tcggcggatc gattgcgctg ctctacgcga
      421 agaccagccg cgacgctgcc accgcgccaa ttttggccga agagcccgag attccgccgc
      481 aggcgactcc gcgctaagga ccgagcaccg cgcggcgaag ggcgaccggg cccattgcgg
      541 gcgcacccga ttccgctttg cgtatgagtt cgacgattcg gcgattaagc ggggcatcga
      601 cgccgattcg ctcggccagc gcaaccagct cgccgttgat gtaatcgact tcggtcttgc
      661 ggccctgccg caagtcgtcg gacatggacg atcgggcctt ggcatcgatc ttccacttcc
      721 tgatgaaaac gctgttgaaa agccagtcgg gcgagtcgat gacgagcggc agcagccgtg
      781 gcccgacggc tccgaccttg gcaggctcga tccccgcctt gttgaggatg cgtaggccct
      841 cgcgcatcgt ggcggcgaat acgcggcggt agtcgcggtg acgaagttga tcgagcaatg
      901 gtcgcccaga cagcgcattg gtcgcattgt taagattgat aaggagcttg ccccaggcaa
      961 gcgcgagcat ctggtccgac agatcgagcg gtgcagggcc atccgcgacc cgcttcgaaa
     1021 gcttgcgcaa cgccggtcga tcctcggcga cgagaggaga accgctaacg cctttgtgga
     1081 accggccttc acccagatag acgcaattga acgggaccat gccgcgggcg acgtcgaagc
     1141 ggtcgccaag ctgccggctc aagacatcaa cgttgctgat gccgttctga aagctgacga
     1201 tcaacgatcg cgccgtagcg tgcttggcaa tatcgcgtgc agcttcggcc gtgtctgagc
     1261 ttttgacgca aacgcagatg atgttcgcgt cggccagcgc ggcggcattc gtgccgaagt
     1321 cgacttcacc aggtaagaaa tggcgctgcc agcccgcgtt ggtggtaatc gtcagaccgt
     1381 gcttttgaat atcgccggca agccgcttgc gcccaatgaa gccgacggga attccggctg
     1441 cctgccaggc cccgccgacg aagcacccga cggaccctgc gccgaggatg gcgaccctag
     1501 ccgcggccac gataggcaac gacgccctgg tcgggcagcc acagaccttc cggcggcggg
     1561 ccgctctgcc agaagacgtc gatcggcatt cccccgcgcg gataccaata gccgccgatg
     1621 cgcagccacc tcggcttcat ctcgtcggta agccgcttcg cgattccaac cgttacgtcc
     1681 tcgtggaagc cgccgtggtt gcggaacgag cccaggaaca gtttcaggct cttgctctcg
     1741 acgatcgtat cgccgggcgc gtagtcgatc accaggtgag cgaaatcggg ctggccggta
     1801 atcgggcata gcgacgtgaa ttccggcgca gcgaagcgca ccaggtagag ctcgcctggc
     1861 cttgggttcg gcacataatc gagcacagcc tcgtcgggag aggcgggaag ggcgctctgc
     1921 ttgccaagat gcttcgggtc catggcgccg cccttactcg gcagcggcca cctcgggcaa
     1981 cgcccagtcg atcggcggca gcccgcgctc ctccagaaag gcattggcct tggagaaatg
     2041 ccggcagccg aagtagccgc tgtgagcgct tagcggggaa ggatgcgggg ccttcaggac
     2101 caggtgccgt gacgtatcga cgaacgccgc tttcttctgc gcgtagtttc cccacaacag
     2161 gaaaacgacc ggcttggacc tcgcgttcac caattgcacc acgacatcgg tgaaccgttc
     2221 ccacccgcgc tcgcgatgcg aagcggctcg gcccatctcg accgtcagca cgctgttgag
     2281 gaggagcacg ccctggcttg cccaatgctc gagaaatccg tggcggctcg ggcggatccc
     2341 gaggtcggtc tccagctcct tgaagatgtt gaccaggctc ggcggcgggc ggactcgcgg
     2401 cggaacggag aagcacaggc cgtgcgcctg cccctcgcca tggtagggat cctggccgag
     2461 gatgacgatg cgaaccttat cgagcgggca aaggtcgagc gcccggaacc agtttgccgc
     2521 gcgcgggaag atggtgcggc ccttggcttt ctcttccgcg aggaactgct tgagcgcggc
     2581 catgtagggc cggccgaact cgctcctcag cggttccaac caactgggat ggagcttgat
     2641 ttgccgggtc gccatcgcgc catcatgtag cctatcctcg acaaatggaa tcgctcgtct
     2701 caacgcaatg gctcgccgac catctcggtg agccggacct caccgtcgtg gactcaagct
     2761 ggcacatgcc cgctaccggg cgaatcgggc gcgacgaata tttgcgcgcc cacatcccgg
     2821 gcgctcgctt tctcgacatc gacgaagtca gcgaccagtc gaatccggcg ccacacatgc
     2881 ttccggacgc acaggagttc ggcgaggcga tggaggcgat cgggatcggg cgcgacgacc
     2941 gaatcgtcgt ctacgacaat tcaccgaccc ggaacgccgc ccgaggctgg ttcatgcttc
     3001 gccatttcgg cgcccgcaac gtcgcgatcc tcgatggcgg ctttcagaaa tggctggcgg
     3061 aaggacggga gaccgaggcc ggagagccat cgcaacgaga ggcaaacttc gatgtcgccg
     3121 agcgggccgg cgaagtcgtc accaagcagc agatcctgga gggtctcgac tgccccttgc
     3181 tcgacgcccg ggggcgcccc cgcttcgagg gggcggagcc cgagccccgc gccgggctgg
     3241 aatccggcca tatcccgggc gcacgcaaca ttccctattc agcgatctac agggatgacg
     3301 gcacgttccg gagcagggac gagctccgcc gcatcttcac caatgcggct gccgatcccg
     3361 atcggccgtt cgtcgccagc tgcgggtcgg gggtgacggc ggcggcactc atcttcgccg
     3421 cgcacctgct cggcaacgac gaggcgcggc tttacgatgg aagctggagc gaatggggtg
     3481 ccgacccggc gaccccgaag gaactgggcc cggcggccta gcggttgagg acttggtgaa
     3541 ggtcgttgag ccccgccttc aactcgtcgg cgatgacccg gagggcggcg acgctggcgt
     3601 cgatgccctg ctcgcgctgg aacgaaacgg cttcgagccc ggcggatgcg accgaaacga
     3661 gctcggccga gcggcggtcg aagcagcgcc tggctgcttc gtccgcgctc tcccaccgct
     3721 ccgaaagctc gtcgtcgaaa tcgtccgctg gcccgccgcc gaactcgtcg accgcgcgaa
     3781 gcgcgttgcg aaggcttgca aggcgcgtga ccggctccgg gcggagccgc tccgatggcc
     3841 ggggttcggg gctgtgcgcg aacagatgca acatgcagcc acttgtcgcg cggcgtgcct
     3901 aaggaagtgt taagccgcct tctccggcgc gatatcgcgc aagatccagc cgcgctgcgg
     3961 gatcgtctcg atgaactcgg ccccgccggc cgcgctcctc agcttctttc ggagcttgga
     4021 gatgaacacg tcgatgatct tgggctgcgg ctggtcgtcc gcgcggcgat agagatgctt
     4081 gagcagcatc gcccgggtga cgacattgtt gcgggcgaag gcgagcagct cgagcacccg
     4141 atattccatc tcggtgatgc cgatcgggtt gccgtcgatc cggatcagcc gctggacctg
     4201 gtcgaccgcc agccggccgc cgcacaggct ctcgggcatc tcgccgcccg acgcccggag
     4261 cgacgtcacc agccgggatg ccgcctcgtc gctttcctcg cgcgacacgc ttgccggcga
     4321 gccgatcagc tcctgctgga tttcggcgag cgcgttgtga gcgtcttcga gcaggcgcga
     4381 gccctcctcg aatcgccgcc tggagcggtc gagcatcgat tcgatctcga ccaggcgggt
     4441 ggaaagtgtc tcttcaggca tgatcaggcg gtccccccgc ttattccggt cagggtattt
     4501 gggcggaagc gatgtcgctg tcgctctgtg gagcggcgat gatcgcctgg gtcgtcgcgc
     4561 ccatgtcgac gatgttggtc tcggcgtcgc cgactgtcga acgaatgccg agtgccgccc
     4621 ggtcgcggcc ggcggcgtcg agcatgctcg tttccgacag cggcctcggt gccggtcctc
     4681 cgaacagggc ctcgatcgcc cgctgctggg catcctgcgg cgtgctggtc acggtgccgg
     4741 caaccggcgg agtgaggctg aagtcgggcg ggatcaccaa cggcgcgttg cgggcgaccg
     4801 cgaattcgtc gggggcggcg ctgcggcccg cgcaaccgcc gagcgcgacg gccgatgcca
     4861 ggagaaggaa gaggctctta cgcattcgtg acggactcct cagggttttc gctgcgcacc
     4921 aggaatgctc gcagtaacag tatcacaacg ccgatgacaa tcgcagcatc gccgatgttg
     4981 aaaatcagga acgggcggaa ggcgccgaag tggagatcgg cgaagtcgac gacatagccg
     5041 tggcgaaccc ggtcgaggat attgccgagc gctccgccaa ggatcatccc gagcgccgcc
     5101 tggtcccagc gcgacctctc gcggccgatc cacaccgcga ccgaaattgc gatggcgctc
     5161 gtcaccgcga ccagcatcca gcggccgaga tcggtcgtcg cgttgaacag gccgagcgaa
     5221 atgccgttat tctccgtcca ggtcaggttg aagaagggca ggacgtaaat ctgcccgacc
     5281 gactgaagtt gaagcggccc cgacacgatc cacttcgcaa gctggtcgag cgcaaagatc
     5341 gccagcgcga tggaaaagcc gaattggcgc tcacgcattc acaaactcct tgcagcggtt
     5401 gcacagggcg ccgtcttctt cgacttccgg aaggtagcgc cagcagcgcc cgcatttgtt
     5461 gttgtcggtt tctgcgatct tcagcgtgtc gccctgatga accgtcgagg tgatgaacaa
     5521 ttcggcgagg aaatcggcgg gcgcaggcag ttcgggaagg gtgacctccg ccgccaggct
     5581 cgacccgatg accttgtcgc ggcgaagcgg ctcgatcgcc tccgtcacag tctcgcgcag
     5641 ctcgcgaagg cgggcccaaa gcgcatcgtc ggcctcgacg accggaatct gaggccattc
     5701 gagcaggtgt accgaccctt cggcgggata gcgcgtgccc cacacttcct cgctggtgaa
     5761 caccagcacc ggcgcgagcc accggaccag cgcgtgctac aggatgtcga gcaccgt
//
LOCUS       DATAKH010000091         8881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_12375,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000091 DATAKH010000000
VERSION     DATAKH010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8881
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12375"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VHN55_03700"
     CDS             <1..1035
                     /locus_tag="VHN55_03700"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEX2803074.1"
                     /translation="RWGAIARAQLFGLTGRADRTIVSAFATSDLEEQRTIQLGHDLAI
                     GGEGLRVGALFTHAWANPAIAGDSDLKARSLLATLYADYPIVRSLGLTFRGSIGFDLV
                     NQDVDFNGRGISEDRLRTGFVRLAMDALGASGDRRLPGEPLWQFNGFIELRKGLDILR
                     ASHACGAIPSSCDGVPPSRPSAVSTAAIVRTFLNAEFHPAPMVTFSLAASGQYAWKPL
                     GSFEEFSAGNYTVGRGYDPGALLGDRGWGTQAEIRLGSTVPASVRKPAVEGYVFFDHA
                     RVRALDGMAPVGPRHLYSTGAGVRVTYDRFVLDGSLAVPLTQLGEADEKPDPRLLVSV
                     TTRLWPWRYR"
     gene            1244..2977
                     /locus_tag="VHN55_03705"
     CDS             1244..2977
                     /locus_tag="VHN55_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011445638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEX2803075.1"
                     /translation="MLVAAPAGAAAQTVPEVRPPTREEVTRPTPPAPQDRAPRLEVEG
                     GIERAPCALDSAEFQGIRFTLRGAQFEGVDGLPDADLTSSYSSLMGTEQPISVVCEIR
                     DRAATILRNAGYIAAVEVPEQRIADGIVQFRVLVARLTQVRVRGDASGAERVIAGYLG
                     QLTKQPVFNRNDAERYLLLASDLPGYTVRLTLRPAGTVPGEVIGDVTVQRIAGYSDFN
                     IQNTGSRALGRWGGLVQTQLFGLTGLGDRTTVAGFMTSDLEEQQTIQLGHDFRLGSQG
                     LGIGGILTYAEARPAIEGDADVRARTLLATLQADYPLLRSLGRNLRGSAGIDFVNQDV
                     DLNGIDLSRDRLRVGFARLAFDSISTRFSPGRSLAEPLWRLTTSIELRKGFDIFGATE
                     DCGPTGADCLGPGEVPPSRLEGRSTAAVVRALLYGEYRPAPKLTFALGARAQYAWKPL
                     LSFEEFSAGNYTVGRGYDPGVLVGDRGWGTQAEVRIGSTVPVNARRPAIQGYAFWDHA
                     RVANLDRLTIVEGARHLDSIGAGARVAYDRFMLDAAIAVPLTRVGLLDEKPDPRFLIS
                     LTTRLWPWSYQ"
     gene            3055..5118
                     /locus_tag="VHN55_03710"
     CDS             3055..5118
                     /locus_tag="VHN55_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803076.1"
                     /translation="MAWLVQPLEAGAQTAPTGAFIGDINSTVGTVNQNRTSNSTETIT
                     VGSATATINWTARSNDFLPLGNTATFTSSPAITNYTVLNRVTPADSGSPIQLNGHLVS
                     TIGGTSANGGNIWFYSPSGIVIGSGAVFDIGSLLLTALDPGGDWTAGANGFSASFSGP
                     AGSASQVRVLDGAQINALASGSYVALIAPRVEQSGTVAVNGSAAYVASEQLTMTVNQG
                     LFDVQVDVGTSDYNGVVHSGTTGGPASTNATTDPHRIYMVAVPKNQTLTMLLGGSLGF
                     AAAASAAVENGEIVLSSGYGLSGDTFDRANVGGATGLGNITIDGSGLTSTAHSLATGT
                     IDANIGNGTIELGISTYGQLGSNGIGVQDSRTGWEAIFDGCVCEGWGVGVSGANTWGG
                     ANNSEGIFNLSLVSHTMTSDSLSSVTKVEGTGLRVTHSFVPSATSDLYQVNVSIKNEA
                     SVASGDVLYRRVMDWDVQPTSFNEYVTLKGVGADDLVGSSDDGFSTVNPFGGRGEIVS
                     GTLDTDFADSGPGDHGALFDFNFGSLDPGEVRNFSIYYGASVTEPAALAALGAVGAEV
                     YSFGQSSDNIDGSTPDRSTFIFGFEGVGGTPVPPPNPPPPPPPPPPPPPAEQPLDLGG
                     SETVLGPIAATDPEDEGEEEEQASASNTSVDPSARLIDSGPLQRDLTVNEPVTSGGDR
                     PGDSN"
     gene            5131..8199
                     /locus_tag="VHN55_03715"
     CDS             5131..8199
                     /locus_tag="VHN55_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HEX2803077.1"
                     /translation="MRKTALGLTALAAAVAFSPPGPAAPLSVRDSFRLGTSGSSYCSA
                     QPVATDAALAGMFDVAYSITCRDAALPVGKIYSLRSGGDPATRLADARRNTVTCGSAQ
                     PGSIDQLGSVEVIECKLSDANVAYRVYHFRKGNQFFAAEGLTGYDSALQLGLRSIVAD
                     EPIEGEVSIATTGAGDPASFARVQAGTLDASRALAEAYRRNNVGNYADAAEFFAAVSS
                     SDNGPISRAEALVNEALQKSNLGRYAEADALFSRAEEYVRGDPIDGRRLRNYRAIHFL
                     NQGQSKEALSELDKPVAKIAAGSRSGANGSLEIDVVTSKRLNAEAGASQLGQSSDGLL
                     PEEKAEILDGQALQLRGTSLRLGGDFGGARQALEAAGAKLEAVRDGRVASIAWMRAQI
                     VGDLAAIAEESGNVAEAGKLYGQAVSMLEASYPGSAALLNSRARLAGFLARSGQIAAA
                     EDMFRQLVHSQDDASNLPPSFARVLRPYVDILLKKGPDPAATQEIFAAMQLMMRPGLA
                     QTQAVLARELTGGTGEASRLFRQAITLTRQVERNRIALAHYDDLANPSPGDLAKAAAL
                     RADLEVAQKEALATQASLASFPRYRAVSSEVIALADLQKELRPGEAYYKMTMVDDGIY
                     ALLATPASARAIKLDIASADLDAQVTSLRDTISTVERGQQVTYAYDVPLAHKLYVDLF
                     APFESEIAQVEHLIFEPDGAMLRMPANPLIVDQASVDLYAARVKADPNADFDFTGINW
                     FGRGRDISTAVSPRSFVNLRNAPTSFGRKLYLGLGHNTVPPGNAAEVIPAVADRDCIL
                     PLSAWSRPISARELTVAGDILSRIDAAGVQTVTGDGFTDSAIEQRADLKDYRIIHFAT
                     HGVVTATRPKCPTQPALLTSFGGAGSDGLLTFREIFDLNLDADLVILSACDTAGGATA
                     LATQSAGLATGGDVALDGLVRAFVGAGGRLVIASHWPVPDDFNATERLITGLFTASAG
                     TPTVRALRLSERQLMDSADTSHPFYWSAFAVVGDGQMPVIRAPTTVAHKN"
     gene            complement(8213..8467)
                     /locus_tag="VHN55_03720"
     CDS             complement(8213..8467)
                     /locus_tag="VHN55_03720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803078.1"
                     /translation="MRARAVMIAVGLTFASAAVAEPPRTPAREVDQTAEKEKPVVLAA
                     ADDPRLQASEPQEESKTPAAAPARRARVTTCRCGDQNPGN"
     gene            complement(8771..8846)
                     /locus_tag="VHN55_03725"
     tRNA            complement(8771..8846)
                     /locus_tag="VHN55_03725"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8811..8813),aa:Lys,seq:ctt)
BASE COUNT         1563 a         2885 c         2836 g         1597 t
ORIGIN      
        1 cgctggggtg caatcgctcg cgcacaattg ttcgggctga cgggcagggc agaccggacg
       61 atcgtttccg cctttgccac ctccgatctc gaggaacagc gaaccattca gctcggccat
      121 gacctggcga tcggcggcga ggggctccgg gtcggcgcgt tgttcaccca tgcctgggcc
      181 aatccggcga tcgccggcga ctcggatctc aaggcgcgca gcctgcttgc aaccctatat
      241 gccgactatc cgatcgtccg gagcctcggg ctgacctttc gcggttcgat cggctttgac
      301 ctcgtcaatc aggacgtcga cttcaatgga cgcggcatta gcgaggaccg cttgcgaacc
      361 ggcttcgtgc gtctcgcaat ggacgccctc ggtgcctccg gcgaccggcg gcttccgggc
      421 gagccactgt ggcaattcaa cggcttcatc gagctccgca aggggctgga cattctccgc
      481 gcgagccacg cgtgcggcgc gattccctca agctgcgacg gggtcccgcc gagcaggccg
      541 tcggccgtct cgactgcggc aatcgttcgg acttttctca atgccgagtt ccatccggca
      601 ccgatggtca cattctcgct tgcggcgagc gggcaatacg cgtggaagcc gctgggcagc
      661 ttcgaggagt tctcagccgg caattacacc gtcggccgag gctacgaccc cggcgcgctg
      721 ctgggcgacc ggggatgggg gacgcaggcc gagatccggc tcggaagcac cgtcccggca
      781 agcgttcgaa aacccgccgt cgaaggctat gtcttcttcg accatgcccg agtccgcgcg
      841 ctcgatggca tggcaccggt cgggccaaga cacctctact cgacgggagc tggagtgcgc
      901 gtgacgtacg accggttcgt actcgacggc tccctggcgg tgcctctcac gcaactgggt
      961 gaagccgacg aaaaaccgga cccgcgattg ctggtttccg tgaccactcg attatggccg
     1021 tggcgctacc gctgaatccc atttcaagac aagattcgtt cctaaccccc tgagacgctt
     1081 taatagtccg cttgttcaaa acgggttaac gtgctctaaa ccttcgcttg gttcggggtg
     1141 cgagtcgcac tttcggggag gggcgcccca aatgattcca acggaacacg caagtttaga
     1201 aaggcaatgg cgaaagcggt ttaggcggct tttgctttcg tccatgctgg tcgccgcgcc
     1261 ggccggtgcg gccgcacaga cggtgccgga agtgcggcct ccgacccgcg aggaagtcac
     1321 tcgtccgact cctccggcgc cacaggacag ggcgccgcgg cttgaagtcg agggcggcat
     1381 cgagcgagcg ccatgcgccc tcgacagcgc agagttccag ggtatccggt tcactctgcg
     1441 cggggcgcag ttcgaaggtg tggacggact ccccgacgcc gacctgacct catcctattc
     1501 ctccctgatg ggcaccgagc agccgatttc cgttgtatgc gagattcgcg atcgggccgc
     1561 gacgatcctg cgcaacgccg gctacatcgc cgccgtcgag gtacccgagc agcgaatcgc
     1621 cgacggaatc gttcaattcc gggtcctggt ggcgcggctg acgcaggtcc gggtccgtgg
     1681 agacgcgagc ggcgccgagc gggtcatcgc gggatatctg ggccagctta cgaagcagcc
     1741 ggtgttcaac cgcaatgacg ccgagcgcta tttgctgctc gccagcgacc ttcccggcta
     1801 cacggttcgg ttgactcttc gtcctgccgg caccgtgccc ggcgaagtga tcggcgacgt
     1861 caccgtgcag cggattgccg gctattccga tttcaacatt caaaacaccg gttcgcgcgc
     1921 actggggcgc tggggtggac ttgttcaaac gcagctgttc ggcctcaccg gcttgggcga
     1981 tcgcaccacg gtcgcgggat tcatgacttc cgacctggag gagcagcaga cgattcagct
     2041 ggggcacgat ttccgcctcg gctcgcaagg gctggggatc ggcggcattc tgacttatgc
     2101 cgaggcccgg ccagcaatcg aaggcgacgc cgacgttcgg gcacgaacgc tgctcgcgac
     2161 gctccaggcg gactatccgc ttttgcgcag cctcggtcgc aacctgcgtg gctcagccgg
     2221 catcgatttc gtcaaccagg atgtagacct gaacggtatc gacctcagcc gggatcggct
     2281 gcgggtcggg ttcgcaaggc tggcgttcga ctcgatcagc acacgattct cgcccggccg
     2341 ctcgcttgcg gagccgctgt ggcggctcac cacctcgatc gagcttcgca agggcttcga
     2401 tattttcgga gcgaccgagg attgcggccc gactggcgca gactgccttg ggccaggcga
     2461 ggtcccgccg agcaggctgg agggccgatc gaccgcggcg gtcgttcgag cgctactcta
     2521 tggcgaatac cggccggcgc ccaagctgac cttcgctctc ggcgcgcggg cccaatatgc
     2581 gtggaagccg ctgctcagct tcgaagagtt ttcggccggc aactacaccg tcggccgggg
     2641 ctacgatccg ggggtgctgg ttggcgaccg cggctgggga acccaggcgg aggttcggat
     2701 cggaagcacg gttccggtca atgcccgccg cccggcgatc cagggatatg ctttctggga
     2761 ccacgcgcgt gtggccaacc tcgaccgact gacgattgtc gaaggagcac ggcatctcga
     2821 ttctatcggt gccggagcgc gcgtcgctta cgaccggttc atgctcgacg ccgccatcgc
     2881 ggtgccgctc acccgggtcg ggctgctcga cgaaaagccg gacccaaggt tcctcatctc
     2941 cctcacaacc cgactgtggc catggagcta tcaatgacag tcagcgcgta tccgggttca
     3001 aatcctgtta gcatcaagcg taaggcgctg atgtggtctt gtgccgcggc aggcgtggcg
     3061 tggttggtcc agcccctcga ggctggagct cagaccgcac cgacgggagc cttcatcggc
     3121 gacatcaatt ccaccgtcgg cacggtaaac cagaaccgta cgtccaacag tacggagacg
     3181 atcacggtcg gatccgcaac tgcgaccatc aactggactg ccaggagcaa cgatttcctg
     3241 ccgctcggca acacagccac tttcacgagc tcgccggcaa tcaccaatta taccgtgctg
     3301 aaccgggtaa ccccggcgga ttcggggagt ccgatccagc tgaacggaca tctcgtctca
     3361 accattggag ggacctcggc caacggcggc aatatctggt tctacagccc gagcgggatt
     3421 gtcattggct ccggagcggt gttcgatatc ggcagcctct tgctcacggc gctcgatccg
     3481 ggcggtgatt ggaccgcggg cgcgaacggc ttttcggcaa gcttttccgg cccggccgga
     3541 tcggcgtcgc aagtccgggt cctcgatggc gctcagataa acgccctggc ctcgggcagt
     3601 tatgtcgcgc tgattgcgcc aagggtcgag cagtccggca ctgtcgcggt caacggttcc
     3661 gccgcctacg tcgcatcgga acagcttacg atgaccgtta accaggggct tttcgacgtg
     3721 caggtcgatg taggcacatc cgattataac ggggtggttc attcgggaac gaccggcggg
     3781 cccgcgagca ccaacgccac taccgatcca caccgcatct acatggtcgc cgttcccaag
     3841 aaccaaacgc tgacgatgct ccttggtgga agcctcggtt tcgccgccgc tgcaagcgct
     3901 gctgtggaaa atggagagat cgtcctttcg tcgggctacg ggctttccgg agacactttc
     3961 gaccgtgcca atgtcggcgg ggccaccggc ctcggcaaca tcacgatcga cggcagcggc
     4021 ctgacctcga ccgcccatag cctggcgacg gggactatcg acgcgaatat cggcaacggc
     4081 acgatcgagc tcggcatctc cacctatggc cagctcggaa gcaacggcat cggggtccag
     4141 gattcgcgca ccggatggga agccattttc gacggttgcg tgtgcgaggg atggggagtt
     4201 ggcgtttccg gggccaatac ctggggcggg gcgaataatt ccgagggaat tttcaacctg
     4261 tccctggttt cccacacgat gacatccgat tccctctctt cggtgacgaa ggtcgagggt
     4321 accggcctcc gggtcacgca cagcttcgtg ccaagtgcga cttccgatct ctaccaggtc
     4381 aacgtgtcca tcaagaatga agcttcggtt gcttcgggcg atgttcttta ccgtcgggtg
     4441 atggactggg acgtccagcc aacttcgttc aacgaatatg tgactctgaa gggggtgggg
     4501 gctgatgatc tggtcggctc ttccgatgat ggcttttcaa cggtcaatcc gttcgggggg
     4561 cgcggcgaga ttgtctcggg aacgctcgac acggactttg ccgacagcgg tccgggcgac
     4621 cacggcgcct tgttcgactt caattttggc tcgctcgatc cgggggaagt taggaacttc
     4681 tcgatctact acggtgcatc ggtgaccgag cccgccgcac tcgcggcgct cggagcggtc
     4741 ggggcggaag tctattcttt cggacagtcc agcgacaaca tcgacggctc aacgccggac
     4801 cgctcgacat tcatcttcgg tttcgaaggg gtggggggga cgccggtgcc gccgccaaat
     4861 ccgccgcctc cgccaccgcc gccaccacca ccacctccag cggagcagcc tctggatctc
     4921 ggcgggtcgg agacggtcct cggccccatc gcggcgaccg atcccgagga cgaaggcgaa
     4981 gaggaagagc aggccagcgc cagcaacact tcggtggacc cgtcggcacg cctgatcgac
     5041 tccggaccgc tgcagcgcga cctgaccgtc aacgagccag tcacgagcgg cggcgaccgg
     5101 cccggcgact cgaattagcg gaggcatgag atgcgcaaga cagcattagg actgactgct
     5161 ctcgcagcgg ccgtggcgtt ctcgccgccg gggccagcgg cacccttgag cgtccgcgac
     5221 agcttccggt tgggaaccag cggatcgagc tattgctcgg cgcagccggt tgcgaccgac
     5281 gccgccctcg ccggaatgtt cgacgtcgct tattcgatca cctgcaggga tgcggcgctt
     5341 ccggtcggca agatctattc gcttcggagc ggcggggacc cggcaacccg gttagcagac
     5401 gcacggcgaa atacggtcac gtgcggttcc gctcagccgg gatccatcga tcagctcggc
     5461 agcgtcgagg tcatcgagtg caagctgtcc gacgccaatg tcgcctatcg ggtctatcat
     5521 ttccgcaagg ggaaccagtt cttcgcagcc gaagggctga cgggatacga cagcgctctc
     5581 cagctcggct tgaggagcat cgtcgccgac gagccgatcg agggcgaagt gtcgattgca
     5641 accaccggcg ccggcgatcc cgcctccttc gctcgggtcc aggcgggaac gctcgacgcg
     5701 agcagggcgc tggctgaagc ttatcgccgc aacaatgtcg gcaattatgc cgacgccgcg
     5761 gaattcttcg ccgccgtcag cagctcggac aacgggccga tcagccgcgc cgaagcgctc
     5821 gtcaacgagg cgcttcagaa gtcgaacctc ggacgctacg ccgaggccga cgccttgttc
     5881 tctcgcgcag aggagtacgt caggggcgat ccgatcgacg ggcgtcgact gcgcaattat
     5941 cgcgccattc actttctcaa ccaggggcag tcgaaagagg cgctaagcga actcgacaag
     6001 ccagtcgcga agattgctgc cggctctcgt tcgggcgcga acgggtcgct ggagatcgat
     6061 gtggtgacct ccaagcgact caacgccgag gccggtgcaa gccagctcgg ccagagctcg
     6121 gacggccttc tgccggaaga gaaggccgaa attctcgacg gccaggcgct tcagcttcgc
     6181 ggcacgtcgc tccggctggg cggcgatttc ggcggagccc gccaggccct tgaggcggcg
     6241 ggcgccaagc tcgaggccgt tcgcgacggc cgggtggcgt cgatcgcgtg gatgcgtgcg
     6301 cagatcgtcg gcgaccttgc cgcgatcgcg gaagaatccg gcaacgttgc ggaagcaggc
     6361 aagctgtacg ggcaagccgt ttcaatgctc gaggcgagct atcccgggtc agccgcgctg
     6421 ttgaactcgc gcgcccgtct cgccggcttc ctggcccgga gcggccagat cgccgccgcc
     6481 gaagacatgt tccgccagct cgtccattct caagacgacg caagcaacct tccgccatcc
     6541 tttgcgcgag tgcttcgccc gtatgtcgac atcctcctaa agaagggccc cgatcccgcc
     6601 gcgacccagg aaatcttcgc tgcgatgcag ctgatgatgc ggcccggcct cgcccagacc
     6661 caggccgtgc tcgcgcgcga attgactggc gggaccggcg aggcgtcgcg cctgttccgg
     6721 caggcgatca ccctgacccg gcaggtcgag cggaatcgca ttgcgctcgc tcattacgac
     6781 gacctggcca atccctcgcc gggcgacctg gccaaggccg cggcactgcg agccgatctc
     6841 gaagttgcgc aaaaggaagc gctcgcgacg caggcctcgc ttgcgagctt tccgcggtac
     6901 cgggccgttt ccagcgaagt cattgccctt gccgacctgc agaaagagct tcggccgggc
     6961 gaagcctatt acaagatgac gatggtcgat gacgggatct acgcgcttct tgcgactccc
     7021 gcatcggcac gcgccatcaa gctagatatc gcctctgcgg acctggatgc gcaggtcacg
     7081 tcccttcgcg ataccatctc gaccgtcgag cgcggtcagc aggtcactta cgcctatgac
     7141 gtgccgcttg cgcacaagct gtacgtcgac ctgttcgccc ccttcgagag cgaaatcgcg
     7201 caagtcgagc acctgatctt cgaacccgac ggagcgatgc ttcggatgcc cgccaacccg
     7261 ctgatcgtcg accaggcatc ggtcgacctg tacgcggccc gagtgaaggc cgatccaaac
     7321 gccgatttcg acttcaccgg aatcaactgg ttcggccgcg gccgcgacat cagcacggcg
     7381 gtgtcgcccc gctcgttcgt caacctgcgc aacgcgccga catcgttcgg gcgcaagctt
     7441 taccttgggc tcggccacaa cacagtcccg cccggaaatg ccgcggaagt gattccggca
     7501 gtcgccgacc gcgactgcat ccttccgctg tcggcgtgga gccgcccgat ttccgcgcgt
     7561 gagcttacag tcgctggcga tatcctgtcg cggatcgatg cagccggagt gcagaccgtc
     7621 accggcgacg gcttcaccga cagtgcgatc gagcaacggg cggatctcaa ggattatcgg
     7681 atcattcact tcgccaccca cggcgtggtg accgccaccc ggcccaagtg cccgacccag
     7741 ccggcgctgc tcaccagctt cggtggagcc ggatcggacg ggctactgac gtttcgagaa
     7801 atcttcgacc tcaacctcga cgcggacctg gtgatcctct ccgcctgcga taccgccggc
     7861 ggagcgaccg cgcttgcgac ccagagcgcc ggcctggcaa ccggtggcga tgttgctctg
     7921 gacgggctgg tgagagcgtt cgtcggcgcc ggcggccggc tcgtgatcgc cagccactgg
     7981 ccggtcccgg acgacttcaa cgcgaccgag cggctcatca ccggcctgtt cactgcttcg
     8041 gcaggcactc cgacggtgag ggcgcttcgc ctttcggaac gccagttgat ggacagcgcg
     8101 gatacgtcgc atccgttcta ctggtcggct ttcgcggtgg tgggtgacgg ccagatgccg
     8161 gtcatccgcg cgcccacgac ggtcgcgcat aagaattagc gcacgtcgta cttcagttgc
     8221 cggggttctg gtcgccgcag cggcaggtcg tcacccgcgc gcgtcgggcg ggtgcggctg
     8281 ccggggtctt cgattcttcc tgcggctcgc tcgcctgaag gcgggggtcg tcagccgcgg
     8341 cgagcacgac cggcttttcc ttctcggctg tctgatcgac ttcgcgagcc ggagtccgtg
     8401 gcggttccgc gacagcagcg ctggcgaagg tcagtcccac tgcaatcatc acggcacgag
     8461 cgcgcatcgc cgctctccca caaattgaag gagaaggatg cagcgacgat ggttacgaac
     8521 gtcctaacgc cgccggaatg atctgccgga ttgtcgcatt cagggtctag aattcgccag
     8581 ccacgcccac tctgacgccc gtgttcttgc tgccggcgtg ggaaatgccg acattgattg
     8641 ccatcggact ggccgctggc aggcgataca tcagcgaacc gccagtttgg gcgcgacagc
     8701 gacgaccgta agcctcgcaa tgccgcgctc gtcggggagg cgattcgacg tcttcaaaaa
     8761 gggaaaagaa tggtggacgc actagggctc gaacctagga cccgctgatt aagagtcagc
     8821 tgctctacca actgagctat gcgtccacac gatcttgagg ggcgcctccg cgggagacgc
     8881 g
//
LOCUS       DATAKH010000092         9500 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_25190,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000092 DATAKH010000000
VERSION     DATAKH010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9500
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25190"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..631)
                     /gene="purN"
                     /locus_tag="VHN55_03730"
     CDS             complement(71..631)
                     /gene="purN"
                     /locus_tag="VHN55_03730"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEX2803079.1"
                     /translation="MRDPRRVAVLISGRGSNMKALVQHASGYEIVLVASNKPLAPGLD
                     WARERGLPTWTLDSRGLDMAVWESSLDEALQDHRVGTIALAGFMRILSPDFARRWAGR
                     VVNIHPSLLPKYRGLDTHKRALEAGDVVSGCSVHIVTEELDSGEVLARSEVAILPSDT
                     PQSLEARVLEAEHRLYPQALAEFIAR"
     gene            complement(624..1715)
                     /gene="purM"
                     /locus_tag="VHN55_03735"
     CDS             complement(624..1715)
                     /gene="purM"
                     /locus_tag="VHN55_03735"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEX2803080.1"
                     /translation="MPRKPLTYADAGVSIDAGNALVKAIGPIARSTARPGAGAELGGF
                     GGLFDLKAAGFRDPLLVAANDGVGTKLKLAIDLDCHSGVGIDLVAMCANDLVVQGAEP
                     LFFLDYFACSTLEPTIAEAVVASIAEGCRSAGCALIGGETAEMPGMYSPGDYDLAGFC
                     VGAVERGELLDGSRVAPGDAIIGIASSGVHSNGFSLVRRIIADQAWDLAAEAPFMPGV
                     SLGDTLLEPTRIYVKPLLPLVRDGLVHGLAHITGGGLLENVPRVLPGGCRAAIDAGAW
                     QFPPLFALLQEGGSIDALEMARTFNCGIGMVAIVAADDADTVVSRLQESGEKALAIGR
                     IESGPRGCVVRGRAGSWGSADDWTASHDA"
     gene            1779..3089
                     /locus_tag="VHN55_03740"
     CDS             1779..3089
                     /locus_tag="VHN55_03740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEX2803081.1"
                     /translation="MPRRPSLIAAILLAFCLMAGGAIYAQMEGGERGILPLDSSGTLE
                     IGGIHVDVGGKDAQSARFAGWRIAQREGFRKLWAKSHNLPVARAPSLSDSTLDDIVSS
                     IIVQREQIGPNRYIADLGVLFDRARAGQLLGIPGVSERSQPMLLIPILITAGTATSLE
                     LRNPWQRAWAQFRTSQSPIDYVRLSGLGPDPLLVNAAQSRRPGRGWWRNILDIYGASD
                     ILVAEVMVHRRYPGGPASARFIGRHGPDGEIIGGFNLSAPNSAGMAAMMDEGVRRMDE
                     LFAAAFHAGALRRDPSLNLPPPPPPPPEERPQQQAPVRYQVGVVAPNAATYNSAIAHL
                     RAVPGVTAVEQVNIALGETSYVFVSYRGEIGSLRSILAARGWGVDVAGNQLRMYVARP
                     VPATPAPAPQPQQQPATPPSNTTGAVTQNRGTTVAATLPQNTLQ"
     gene            3086..3700
                     /locus_tag="VHN55_03745"
     CDS             3086..3700
                     /locus_tag="VHN55_03745"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HEX2803082.1"
                     /translation="MSGREQIALPLDWPQSQGESRLIVTEANRAAFEHFRKWSLWPVK
                     ATLLAGPRRSGRSLLARSFVERVGGRVVDQADRADEEELFHSWNAAQESGHPLVMIVD
                     RVAPEWTIALPDLRTRIAVTPVASIAEPDDALFQALIELFFADRGLHIPRDALRFMAE
                     RLHRDYVTAERAVEAVDRYAIAERARLSLPTVRRALIDSGMIDS"
     gene            complement(3697..3999)
                     /locus_tag="VHN55_03750"
     CDS             complement(3697..3999)
                     /locus_tag="VHN55_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019052981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="I78 family peptidase inhibitor"
                     /protein_id="HEX2803083.1"
                     /translation="MSARITAAAMTALAIGACATAEPKIPVRGATPGYTCSNSGLDQF
                     VGRQATQDLGAEMLRASGSRILRWVRPGMAVTMEFSPERLTVHLDEEGRVSGASCG"
     gene            complement(3996..5174)
                     /gene="rnd"
                     /locus_tag="VHN55_03755"
     CDS             complement(3996..5174)
                     /gene="rnd"
                     /locus_tag="VHN55_03755"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEX2803084.1"
                     /translation="MKIHPLITETAALSDLVERLSKHPFVAVDTEFMRENTFWPDLCL
                     IQVASPDEAAAIDPKADLDLDPLLDLLVNNEDVLKVFHAGSQDLEIVYNLTGKMPRAL
                     FDTQIAAMALGHGEQVGYSSLIESMLGHSLDKGARFTDWSRRPLDKRQIDYAIADVTH
                     LAKIFPRLVEKLKKTGRGAWLDEEMERLADPSSFAFEPEDAWKRLRLPSRNPAVLGRL
                     KALAGWRETEARTKNIPRGRIVKDDTLVELAAHPPKKQEDLAKVRGLSGGWKNNDIGA
                     RLMAALEEAKPLEPDEMPSREPRRPGLTKDAALVGDLLKLLLKIRAKESGVAPRLIAR
                     SDDLEALAAGVRDGLNILRGWRFEEFGRDALDLVEGRLGFAIENGKLKMSRLVEEVDA
                     "
     gene            5288..7063
                     /gene="aspS"
                     /locus_tag="VHN55_03760"
     CDS             5288..7063
                     /gene="aspS"
                     /locus_tag="VHN55_03760"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEX2803085.1"
                     /translation="MHAYRTHTCAELRSSDVGKTVRLSGWVHRDRDHGGVLFIDLRDH
                     YGITQVVADQDNPVQALLDSLRLESVVTITGEVVARSAEAVNPKLPTGEIEVVAREVE
                     VRSKADELPMPVATEADYPEEIRLKYRYLDLRREEMHRNIILRSAVIASIRRRMIEQG
                     FMEFQTPILTASSPEGARDYLVPSRVHPGKFYALPQAPQMFKQLIMVAGFDKYFQIAP
                     CFRDEDARADRSPGEFYQLDFEMSFVTQDDVFNAIEPVLAGVFEEFAEGRSVTPAGEF
                     VRIPYKEALLKYGTDKPDLRNPLLVHDVGGHFDGSGFGLFAKIVDGGGVVRAVPAPNT
                     ADKSRKFFDDMNEWARGEGFAGLGYATRKGGEWGGPIAKNHGTEGMDRLADEMGLGPD
                     DGIFFAAGKEAEAAKLAGAARTRVGEQLDLIEKGAFRFCWIVDFPMFEYNDEQKKIDF
                     SHNPFSMPQGEMEALETKDPLEILAWQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAG
                     YTREGVDRDFSGMINAFKFGAPPHGGSAPGIDRIVMLLADEPNIREVILFPMNQKAED
                     LMMNAPAEVPAKHLRELGLRIVEPS"
     gene            7269..8918
                     /locus_tag="VHN55_03765"
     CDS             7269..8918
                     /locus_tag="VHN55_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020480453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HEX2803086.1"
                     /translation="MYDAYARWESAESAYFEDENGELKPAGNLPRVDPQSQKRRETHL
                     RDVLLQLDAIPVAQLSADEQVNAAVFRAVLENALIEARFRTWQMPFNSDSSFWTYLNS
                     EQAFENPAEYRRYIARMRDIPRYFDEQIANMRAGLDRGFSVPRVTLKGRDSSVAQFID
                     AGVEESPFFKPFETMPSTISESEQHALRAEASAAIEQSVIPAYRRLLAFIRDEYTPKS
                     RNTISAQALPDGDSFYRSQVREYTTLDLSPEEIHQLGLKEVARIDAAMRKTMLESGFK
                     GSFEEFLNFLKTDPQFFAKTPDELMGVSAYVAKRVDGKIGTIVGLLPRKRFGIIPVPD
                     ALAPFYTAGRGGLENCMMNTHNLPVRPLYNIPALTLHECIPGHSFQAALAEEQKALPS
                     FRRHVYFSGAGEGWGLYSEWLGNELGIYRTPYERFGQLSYEMWRAARLVIDTGIHRYG
                     WSRQRAIDYLAGHTALSQHEVETEVDRYISWPGQALAYKLGELTIRRLRSEAESTLGP
                     RFDQRRFHDAILALGSVPLTVLEDRMRAFIREEAARSASAS"
     gene            complement(8922..9395)
                     /locus_tag="VHN55_03770"
     CDS             complement(8922..9395)
                     /locus_tag="VHN55_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020819484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX2803087.1"
                     /translation="MSMFEGIESGWLWMIGGVLLLIAEIIAPGVFLVWIGIAAIVTGL
                     FAVLFGIGLAGQLGLFALYAVLAVMGGRRFYAVRGVDAADPLLNDRAAQLVGRRVLVV
                     SPVDEDSGRVRVGDSEWSARGGPAQPGERVRITGVEGNCLIVEPERILGSPPSSD"
BASE COUNT         1693 a         3154 c         2989 g         1664 t
ORIGIN      
        1 ccgtgagaga gccgttcttc cgtctccgga agcttgagcg ctgcttcgcg gattttcgtc
       61 agcgcgtttt tcaccttgcg atgaactccg ccagcgcctg aggataaagc cgatgctcgg
      121 cttcgagcac acgggcttcc aacgattgcg gcgtgtcgga aggcagtatc gccacttccg
      181 atcgcgccag gacctcgccc gaatcgagct cctcggttac gatatggacg ctgcagccac
      241 tgacaacatc gccggcctcg agggcccgct tgtgagtgtc gagcccccgg tatttcggaa
      301 gcagcgaggg gtggatgttg accactcggc cggcccatct gcgggcgaag tcgggcgaca
      361 ggatccgcat gaacccggca agcgctatcg ttccgacgcg atggtcctgt agcgcctcgt
      421 caagggagga ttcccagacg gccatgtcga ggccacggct atccagggtc cacgtcggca
      481 ggccgcgttc gcgggcccag tccaggccag gcgcgagcgg cttgttcgaa gccaccaaaa
      541 cgatctcgta tccgctcgcg tgttggacca gcgccttcat gttgcttccg cggccggaaa
      601 tcaggaccgc aacccgcctc gggtcacgca tcgtggctgg ccgtccagtc gtcggccgag
      661 ccccaactcc cggctcgccc ccgaacaaca caaccgcgcg gcccgctctc gatacggccg
      721 atcgccagtg ccttctcgcc gctctcctgg agtcgcgaga ccaccgtatc ggcgtcgtcc
      781 gccgcgacga tcgcgaccat tccgatcccg cagttgaagg tgcgggccat ttccaaggcg
      841 tcaattgacc cgccttcctg gagcagagcg aacagtggcg ggaactgcca cgcgccggca
      901 tcgatcgcgg cgcggcagcc gccgggaagc acccgcggga cgttttcgag gaggccgccg
      961 ccggttatgt gcgccagtcc gtggaccaat ccatcgcgaa ccagcggaag caggggcttc
     1021 acgtaaattc gcgtcggctc cagcagcgtg tcgcccaggc tgactccggg catgaagggc
     1081 gcctccgccg ccaaatccca agcttggtcc gcgatgatcc ggcggaccag cgaaaagccg
     1141 ttgctgtgaa ccccggagct cgcgattccg atgatcgcgt cgccgggcgc gacgcggctg
     1201 ccgtcgagaa gctcgccgcg ctccaccgcc ccaacgcaaa agccggcaag gtcgtagtcc
     1261 cccggagaat acattccggg catttccgcg gtctcgcccc cgatgagcgc gcagccggca
     1321 ctgcggcaac cctcggcgat ggaggcgacg accgcctcgg caatcgtcgg ctcgagggtc
     1381 gagcaggcga aatagtccag gaaaaacaac ggttcggcgc cctgcacgac gagatcgttg
     1441 gcgcacatgg cgacgaggtc gatgcctacg cccgagtgac agtcgagatc gattgccagc
     1501 ttcagcttgg ttccgacgcc gtcattggcc gcgaccagca gcggatctcg aaatccggcg
     1561 gccttcaggt cgaagagccc gccgaagccg ccaagctcgg ctccggcgcc cggccgggca
     1621 gtcgaacggg cgatcgggcc gatcgctttt acgagcgcgt tgccggcgtc gatcgatact
     1681 ccggcatcgg cataggtgag cggctttctc ggcatcgaac cgccgcctag ccagaagcgg
     1741 cttggatttc cacgccgttg tcgccaaaag cgcgctgaat gcctcgccgt ccatcgctca
     1801 tcgctgcaat tctcctggcg ttctgcctca tggctggcgg ggcgatttac gcgcagatgg
     1861 aaggcggaga gcgcggaatc ctgccgctcg acagctccgg aacgctggaa atcggcggaa
     1921 tccatgtcga tgtcggaggc aaggacgcgc agtcggcgcg gtttgctgga tggaggatcg
     1981 cccagcggga aggcttccgg aaactgtggg ccaagagcca taacctgccg gtcgcgagag
     2041 cgccgtcgct ttccgactcg acgctcgacg acatcgtcag ctcgatcatc gtccagaggg
     2101 agcagatcgg ccccaaccgc tacatcgccg atctcggcgt tctcttcgat cgcgccaggg
     2161 cagggcagct tctgggcatt ccgggagtga gcgaacgttc tcagccgatg ctgctgattc
     2221 cgatcctcat caccgccggc accgcgacaa gcctcgagct tcgcaatccg tggcagcgcg
     2281 cctgggcgca gtttcgaacc tcgcagagcc cgatcgatta tgtccgacta agcggcctcg
     2341 ggcccgatcc gctgctggtc aatgctgcgc aatcgcgtcg gcccggacgc ggctggtggc
     2401 gcaatatcct cgacatctac ggcgcctctg acatcctcgt cgctgaggtg atggttcacc
     2461 ggcgttaccc gggcgggccc gcgagcgccc ggttcatcgg ccgccatggc cctgacgggg
     2521 agattatcgg cggattcaac ctgtcggctc cgaacagcgc cgggatggcc gcaatgatgg
     2581 acgagggcgt tcgcaggatg gacgagctgt ttgccgccgc cttccatgcg ggcgcgcttc
     2641 ggcgtgaccc cagcctcaat ctgcccccgc cgccgccgcc tcctcccgag gagcggccgc
     2701 agcagcaagc gccggtgcgc taccaggttg gcgtagtcgc cccgaatgcc gccacctaca
     2761 attcggcgat tgcccatctt cgcgccgtgc ccggcgtgac cgcagtcgag caggtcaaca
     2821 tcgccctggg cgaaaccagc tatgtcttcg tcagctatcg aggcgagatt ggctcgcttc
     2881 gctcgatcct cgccgcgcgc ggctggggag tcgatgtcgc cgggaaccag ctgaggatgt
     2941 atgttgctcg gccggtgccg gcgacaccgg cgcccgcgcc gcagccgcag cagcaaccgg
     3001 caaccccgcc gtcgaacacg acgggcgcag ttacgcagaa ccgcggcacg actgtcgcgg
     3061 ccactctacc gcaaaacaca ttgcagtgag cggacgggaa cagatcgccc tcccgctcga
     3121 ctggccgcag agccagggcg aatcccggct gattgtcact gaagccaacc gcgcggcgtt
     3181 cgagcatttc cgcaagtgga gcctgtggcc ggtcaaggcg accctgctgg ctggcccgcg
     3241 ccgttccgga cggagcctgc tcgcccgaag cttcgtcgaa cgggtgggcg ggcgcgttgt
     3301 cgaccaggcc gatcgagcgg atgaggaaga gctgtttcat tcgtggaacg ccgcgcagga
     3361 aagcggtcac ccgttggtga tgatcgtgga ccgcgtcgcc cctgagtgga ccatcgctct
     3421 accggacctg aggaccagga tcgctgtcac gcccgtcgcg agcatcgcag agcctgacga
     3481 tgctttgttc caagcgttga tcgagctgtt cttcgccgac cgcgggctcc acattccccg
     3541 cgatgcgctc cggttcatgg ccgagcggct ccaccgcgat tatgtgaccg cggaacgggc
     3601 ggtcgaagcc gtcgaccgct acgccatcgc ggagcgtgcg cggctcagcc tgccgacggt
     3661 tcggcgggcg ctgatcgatt cgggaatgat cgactcctag ccgcagctgg cgccactgac
     3721 ccgaccttcc tcgtcgaggt gcaccgtcag ccgctcgggg ctgaattcca tcgtcaccgc
     3781 cattcccggc cgcacccaac gcaggatgcg cgacccggaa gcgcgaagca tctcggcacc
     3841 caagtcctga gtggcctggc gcccgacgaa ctggtcgagt ccgctattgc tgcaggtgta
     3901 gcccggcgtg gcgccgcgga ccggaatctt gggctcggct gtcgcacaag cgccgattgc
     3961 aagtgcggtc atcgctgcag cggtgattcg cgcgctcatg cgtccacctc ttccaccagc
     4021 ctgctcatct tcaatttccc gttttcgatg gcgaatccca gtcgtccttc gaccaggtcg
     4081 agcgcgtcac gcccgaattc ttcaaaccgc cagcccctga ggatgttcaa accgtcgcgc
     4141 actccggctg ccagcgcttc gaggtcgtcg cttcgagcga tgagccgggg cgccactccg
     4201 ctttccttgg cccggatctt aagcaagagc ttgaggaggt cgccgaccag cgccgcgtcc
     4261 ttggtgagtc ccggtcgccg cggctcgcgc gacggcattt cgtccggttc cagcggcttc
     4321 gcctcttcca gcgccgccat cagccgggca ccgatgtcgt tgttcttcca accgccggag
     4381 agcccgcgga ccttcgccag gtcttcctgt ttcttgggcg gatgggcggc aagctcgacc
     4441 aaggtgtcgt ccttgacgat tcgtccgcgc gggatgttct tcgtccgagc ttccgtctcg
     4501 cgccagccgg cgagcgcctt caggcgccca agcaccgccg ggttgcggct aggaagccga
     4561 agccgcttcc acgcatcctc cggctcgaaa gcgaagctcg acggatccgc tagccgttcc
     4621 atctcctcgt cgagccaggc gccgcggccg gtctttttca gcttttcgac cagccgcggg
     4681 aagatcttgg cgagatgggt gacatcggcg atcgcataat cgatctggcg cttgtcgagc
     4741 ggacgcctgc tccagtcggt aaagcgcgcg cccttgtcga ggctgtggcc gagcatcgac
     4801 tcgatcaggc tcgaatatcc gacctgctcg ccgtggccga gcgccattgc cgcgatttgc
     4861 gtgtcgaaca gcgcgcgcgg catcttgccg gtcaggttgt agacgatttc gaggtcctgg
     4921 cttccggcat gaaagacctt gaggacgtct tcgttgttga ccagcaggtc gagcagcggg
     4981 tcgaggtcga gatcggcctt gggatcgatc gccgcggctt catcggggct cgcgacctgg
     5041 atcagacaca ggtccggcca aaaggtgttc tcgcgcatga actcggtgtc caccgcgacg
     5101 aacggatgct tcgacaggcg ctcgacgagg tcggaaagcg cggcggtttc ggtgataagc
     5161 ggatgaatct tcatagtgtg cggcggcgcc atagcgcgct ctgacgcctt gacaaagtgg
     5221 cgcctgaatg gcgaagcgct ggcgcgaatt tcccgcccgt ccagtccatc cggaacctgt
     5281 agcgatcatg cacgcctacc gaactcacac atgcgctgag ctgcgctcct ccgacgtcgg
     5341 gaaaacggtg cggctgtcgg gctgggtcca ccgcgatcgc gaccatggcg gcgtcctgtt
     5401 catcgatctg cgcgaccatt acggaatcac ccaggtcgtc gccgaccagg acaatccggt
     5461 gcaggcgctt ctcgattcgc tccggctcga gtcggtggtg accattaccg gcgaggtcgt
     5521 cgcccgctct gctgaagcgg tgaacccgaa gctacccacc ggcgagatcg aggtcgtcgc
     5581 gcgcgaggtc gaggtccggt cgaaggccga tgagctgccg atgccggtcg cgacagaggc
     5641 tgactatccc gaggaaatcc gcctaaagta ccgctacctc gaccttcgcc gcgaggagat
     5701 gcaccgcaat atcattcttc gctcggcggt gatcgcgtcg atccggcgcc gaatgatcga
     5761 gcaggggttc atggagttcc agacccctat cctgacggct agctcgcccg agggcgcgcg
     5821 cgattatctg gtcccgagca gggtccatcc cggcaaattc tacgcgctcc cgcaggcgcc
     5881 gcagatgttc aagcagctga tcatggtcgc cggcttcgac aaatatttcc agatcgcgcc
     5941 ctgcttccga gacgaggacg cccgcgccga ccgctcgcct ggcgaattct accagctcga
     6001 tttcgagatg agcttcgtca cccaggacga cgtattcaac gccatcgagc cggtgctggc
     6061 cggggttttc gaggaattcg cggagggcag gagcgtgact ccggccggcg agttcgttcg
     6121 aattccctac aaggaagcgc tgctcaaata cggcaccgac aagcccgacc ttcgcaaccc
     6181 actcctcgtt cacgacgtcg gcgggcattt cgacggatcc ggcttcggtc ttttcgccaa
     6241 gatcgtcgac ggcggcggag tggtccgcgc tgtgccggca ccgaacacgg cggacaaaag
     6301 ccgcaagttc tttgacgaca tgaacgaatg ggctcgcggc gaaggcttcg ccgggcttgg
     6361 ctatgcgacg cgcaagggcg gcgagtgggg cggtccgatc gcaaagaacc atggcaccga
     6421 aggcatggac cgtctcgccg acgaaatggg ccttggaccg gatgacggaa tcttcttcgc
     6481 cgccggcaag gaagcagaag ccgccaagct cgccggcgcc gcccgcaccc gcgtgggcga
     6541 gcagctcgac cttatcgaga aaggggcgtt ccgcttctgc tggatcgtcg attttccgat
     6601 gttcgagtat aatgacgagc agaagaagat cgacttctcg cacaacccct tctcgatgcc
     6661 gcaaggcgag atggaagcgt tggaaacgaa ggacccgctc gagatcctcg cctggcaata
     6721 tgacatcgtc tgcaacggcg tggagctgag ctcgggcgcg atccggaacc accggccgga
     6781 catcatgtac aaggccttcg agatcgccgg ctacacgcgc gaaggggtcg atcgcgactt
     6841 ctcgggcatg atcaacgcct tcaagttcgg cgccccgccg cacggaggat cggcgccggg
     6901 aatcgaccga atcgtcatgc tcctcgccga cgagcccaac atccgcgagg tcatcctctt
     6961 cccgatgaac cagaaggccg aggatttgat gatgaacgcg cccgccgagg tcccggcgaa
     7021 gcaccttcgt gagctcgggc tcaggatcgt cgagccgagc tagcggagat tcgctcggca
     7081 ttgtcccgct ccgcacagct gctaaccgtc gcgctggaga gggagcggaa atgatgacag
     7141 cgttgcgtat cggcgcgatg atcgccgcca tagcgattgc agggccaacg agtttggctc
     7201 aggcacaaac gccgccagtg gcggctccgg gtccagcctt aaccgacgcg gactctcgcc
     7261 tcagggcctt gtacgacgcc tacgcgcgtt gggagtcggc ggaatctgca tatttcgagg
     7321 acgaaaacgg cgagctcaag ccggccggca atctgccgcg ggtcgacccg caatcgcaga
     7381 agcgccgcga aacccatttg cgcgacgtgc tcctccagct tgacgcaatc cccgtcgccc
     7441 aactctctgc cgacgagcag gtgaacgccg cagtctttcg cgccgtgctc gaaaatgcgc
     7501 tgatcgaagc gcgcttccga acctggcaaa tgccgttcaa cagcgacagc tccttctgga
     7561 cgtacctcaa ttcagagcag gccttcgaaa atccggccga gtaccggcgg tacatcgccc
     7621 ggatgcgcga catcccgcgt tatttcgacg agcagatcgc gaacatgcgt gccggcctcg
     7681 accgcgggtt cagcgtgccg cgcgtgaccc tgaagggccg tgactcatcg gtcgcgcaat
     7741 tcatcgacgc cggagtcgag gaaagcccgt ttttcaagcc gttcgagacg atgccgtcga
     7801 caatatcgga gtccgagcaa catgcccttc gggcggaggc gagcgcggcg atcgagcaat
     7861 cggtgatccc agcctatcgc aggctgttgg ccttcattcg cgacgaatat actccgaaat
     7921 cgcgtaacac gatctcggcg caggccctgc cggacggcga ctccttctac cgctcgcaag
     7981 tgcgtgaata tacgaccctc gacctgtcgc cggaggagat tcaccagctc ggcctgaagg
     8041 aggttgctcg aatcgacgcc gcgatgcgca agacgatgct cgaaagcggc ttcaagggca
     8101 gcttcgagga gttcctgaat ttcctcaaaa ccgaccccca attcttcgcc aagacaccgg
     8161 acgagctgat gggcgtctcg gcctatgtgg ccaagcgggt cgacggcaag atcggcacga
     8221 tcgtcgggct tctgccgcgc aagcgcttcg ggatcatccc ggtgccggac gcgttagcgc
     8281 cgttttacac cgcaggccgt ggcgggctcg agaattgcat gatgaacacc cacaacctgc
     8341 cggttcggcc actgtacaat atcccggcgc tgactcttca cgaatgcatt cccggccaca
     8401 gcttccaggc cgccctggcc gaggagcaga aggcgctccc atcgttcagg cggcacgttt
     8461 atttctccgg cgctggcgag ggatggggac tctacagcga gtggctcggc aacgagcttg
     8521 gaatctatcg cacgccctac gagcggttcg gccagctcag ctacgaaatg tggcgggccg
     8581 cgcggcttgt gatcgacaca gggatccatc gttacggctg gtcgcgccaa cgggcgatcg
     8641 actatctcgc cggccacacg gcgctgtcgc agcatgaggt cgagaccgag gtcgaccgct
     8701 acatcagctg gccgggacag gcattggcct acaagttggg cgagttgacg atccggcgcc
     8761 tccgctccga ggctgaatcg acgcttggcc caaggttcga ccagcgtcgc ttccatgacg
     8821 cgattctcgc actcggttca gtcccgctaa ccgtgctcga ggaccggatg cgcgccttca
     8881 tccgcgagga ggcggcgcgg tcggcttcgg caagctagtg gtcagtcgct cgacggcggc
     8941 gatcccaaga tgcgttcggg ctcgacgatc aggcagtttc cttcgacccc ggtgatcctg
     9001 actcgttcgc cgggctgggc tgggccgccg cgggcgctcc attcgctgtc cccgacccgg
     9061 acgcggccgc tgtcctcgtc gaccgggctg actaccagaa cccggcgccc gaccagttgc
     9121 gcggcgcggt cattgagaag cggatctgcg gcatcgacac ccctgactgc atagaagcgg
     9181 cggccgccca tcaccgcgag caccgcataa agcgcgaaca agccgagctg tccggcgagt
     9241 ccgattccaa acagaaccgc gaagaggcca gtgacgatcg cggcgatccc gatccacacc
     9301 aggaacactc caggtgcgat aatttcggca atgaggagca ggactccgcc gatcatccac
     9361 agccagccgg attcgattcc ttcgaacatc gacatgtcaa ccctcgatct tgggtacgcc
     9421 gggctgagtg cgcggcttgg gcgcgggcga ttccggcttg tcctcgccga aaacttcgcg
     9481 ggcgagctcg cctattcccc
//
LOCUS       DATAKH010000093         2065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32078,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000093 DATAKH010000000
VERSION     DATAKH010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32078"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1975)
                     /locus_tag="VHN55_03775"
     CDS             complement(<1..1975)
                     /locus_tag="VHN55_03775"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX2803088.1"
                     /translation="MGRAAIFIPILLACSASASAKIPATVADAAATSLASIPASILSQ
                     TAAAAATAATAGQNINSTIAEWRRLRQGGNLSFANYAHFLNYNQDWPAEAALRRDAEK
                     AMRPGENASLVLGFYRLEKPKSGNGWTRYSDALSNAGRGAEAITAAKQAWASSDLSAA
                     DEAYILARFGAHLTTADHDKRVDALLFDKDPTDASRLLAWTSPIRRPAFAARIAMQSR
                     DPNAETSFRAAAHRLAADSGLLMDRLRYLRDGGNENMARQLAAQPHQFTERPADPERW
                     YEMMLILANGAAQDRQWQLTYNIARQLDDALPQGAQLADQSYGIRDNYTSLAWLAGRT
                     ALDRIGSANNAVAMFYRYAQGGKSLQVATKGWYWAGRAALAAGRPADASAYFQRAAAY
                     PELFYGQLALERLGRSVPAPGYAHAVAPTDPTRAAFAQKTLVQATRAMMYRGSANERM
                     QFVRALSESVKTPAERALAIELSRQLGRQDLAVWVARSSRNDGDAYYVRDAFPTLRST
                     PRTSWSLAHGITRQESSFDPYAISHAGARGMMQLMPGTAREQAGKLGVGYDSSRIHDP
                     DYNVMLGSAYFQRMLNTWNGSVPLAVASYNAGPGNVRKWINAYGDPRSARVDMIGWIE
                     AIPFSETRGYVQRVIENSVVYDSMRPQPQSRTAL"
BASE COUNT          340 a          653 c          695 g          377 t
ORIGIN      
        1 gaagcgcggt ccggctctgc ggctgtggcc tcatgctgtc gtagacgacg ctgttctcga
       61 tcacccgctg cacgtagccg cgggtctcgc tgaacgggat cgcctcgatc cagccgatca
      121 tgtcgaccct tgcggatcgc ggatcgccat acgcgttgat ccacttgcga acgttgcctg
      181 gccccgcatt gtagcttgca accgccagcg gaacgctgcc gttccaggtg ttcagcatcc
      241 gctggaagta agccgagccg agcatcacgt tataatcggg atcgtggatt cggctgctgt
      301 cgtagccgac gccgagcttg cccgcctgct cgcgcgcggt tcccggcatc agctgcatca
      361 tgccccgggc gccggcgtgg ctgatcgcat agggatcgaa ggagctttcc tggcgggtga
      421 tcccgtgcgc cagcgaccag ctggtccgcg gcgtgcttcg aagcgtcggg aaggcgtcgc
      481 ggacgtaata agcgtcgcca tcgttgcgcg aagaccgcgc gacccacacc gcgaggtcct
      541 gccgcccaag ctgccgcgac agttcgatcg cgagcgcccg ctcggccgga gtctttaccg
      601 attccgaaag cgcgcggacg aactgcatcc gctcgtttgc gctgccccgg tacatcatcg
      661 cccgagtggc ctggacgagc gtcttctgtg caaaagcggc gcgtgtcgga tcggtcggcg
      721 cgacggcatg tgcgtaaccg ggcgccggaa cggatcggcc cagccgttcc agggcaagct
      781 ggccgtagaa caactccgga taagcggcgg cacgctggaa ataggcgctg gcgtcggcgg
      841 ggcgcccggc cgcgagggcg gcgcggcctg cccaatacca cccctttgtc gcgacctgca
      901 gcgacttgcc gccctgtgcg tagcggtaga acatcgcgac agcattgttg gcactgccga
      961 tccggtcgag ggcggttcgt ccggcgagcc aggcgaggct cgtgtaattg tcgcgaattc
     1021 cataggattg gtcggccagc tgggcgcctt gcggcaacgc atcgtcgagc tggcgcgcga
     1081 tattgtaggt gagctgccac tgccggtcct gcgcggctcc attggccagg atcagcatca
     1141 tctcgtacca ccgctccggg tcggcgggac gctctgtgaa ctggtgcggc tgggccgcaa
     1201 gctggcgggc catgttctcg ttgccaccgt cgcgaaggta gcggagccgg tccatcaaca
     1261 ggccggagtc cgcggcgagc cgatgggccg cggcgcggaa cgatgtctcg gcgttggggt
     1321 cgcgcgactg catcgcaatg cgggcggcga aggcgggacg gcggatcggg ctggtccagg
     1381 caagcagccg tgacgcgtcc gtcggatcct tgtcgaacag cagcgcgtcg acgcgcttgt
     1441 cgtggtcggc ggtcgtcaaa tgcgcgccga aacgggcgag aatataggct tcgtccgcag
     1501 cgctgaggtc gctcgatgcc caggcttgtt tggcagccgt gatggcctcg gccccgcggc
     1561 cggcattgct cagggcatcg gaatagcgtg tccagccatt gccgctcttc ggcttttcga
     1621 gccggtagaa accgagcacc agcgacgcat tctcgcccgg gcgcatcgcc ttttccgcat
     1681 cgcgccggag cgccgcctcg gcgggccagt cctggttgta gtttaggaaa tgggcataat
     1741 tggcgaaact caggttgccg ccctggcgaa gccgtcgcca ctcggcgatc gtcgagttga
     1801 tattctggcc tgccgtcgcc gccgtggctg cagcagcagc cgtttgcgac aggatggacg
     1861 caggaatgct tgctaatgac gtcgccgccg catcggccac tgtcgcagga attttagccg
     1921 atgccgaagc cgaacatgcc agcaggattg gaatgaagat tgccgctcta cccatgctgg
     1981 acatcctagc gctcggctcc ttatcagttg ctgaatgggg aaggggtcta acgccccaat
     2041 aactcccaag tgaaggaaaa atcat
//
LOCUS       DATAKH010000094         5985 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20719,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000094 DATAKH010000000
VERSION     DATAKH010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5985
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20719"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1635
                     /locus_tag="VHN55_03780"
     CDS             <1..1635
                     /locus_tag="VHN55_03780"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019517463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HEX2803089.1"
                     /translation="TMRVAQSLYEDGLITYMRTDGVDMAGEAISAARRAITDRYDAGY
                     VPDQPRKYTSKVKNAQEAHEAVRPTDFSQRRAGSGDHARLYELIYNRALASQMASARL
                     ERTTVELADGAGRAVLRATGQVVLFPGYLALYEEGVDEKADDEEGARMPVLRQGDSPA
                     KTGVESTQHFTQPPPRYSEASLVKRLEELGIGRPSTYASILQTLKDREYVRVEKARFV
                     PEESGRLVTAFLERFFEKYVSYDYTAELEEELDDVSGGRLEWHKLLQEFWRDFRPKAS
                     EVMDQKPSEITAQIDEFLAPWLYPAREDGSDARLCPQCGNGRLSLRGGRYGAFIACSN
                     YPECKYTLNFGQAGGQPKASEGPQDLGNGIELKTGRFGQYLEREGKRASIPKDVPSDE
                     LTTEMAERLLSLPREIGPHPETGKPITASIGRYGPYLAHDGKYAKLGSTAEVFETGMN
                     AAVSKLADAAAARGGQRGGSREPIAVLGAHPQSGKEIKVMAGRYGPYATDGSTNATLP
                     KGVEPNAVTLDEAVRLIDERAAKGPAKKKGRKKKKP"
     gene            complement(1632..2387)
                     /locus_tag="VHN55_03785"
     CDS             complement(1632..2387)
                     /locus_tag="VHN55_03785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010160511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HEX2803090.1"
                     /translation="MTALTDDELDRYARQIVLPQIGGVGQRRLKTARVAIVGAGGIGS
                     AAIPALAASGIRTLTIVDDGEVERSNLQRQTIFRDDQLGQPKAVLSADFARALNPHAN
                     AIAIQKRLDSANAEKLIGGHDLVLDGSDNFATRLTVSDAATRLRIPLVSAAAVQFQGQ
                     IGLFRGWEADKPCYRCFVGDAFDADDCDTCAEQGVLGALAATAGSFGALMAIRSLVGI
                     GEDSSGRLFLFDGLSLEWRTIRIPKDRGCRACG"
     gene            complement(2384..2821)
                     /gene="dut"
                     /locus_tag="VHN55_03790"
     CDS             complement(2384..2821)
                     /gene="dut"
                     /locus_tag="VHN55_03790"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEX2803091.1"
                     /translation="MIEIKLTRLPHGEGLPLPRYASEDAVGLDVAAAEDLILDPGQRH
                     AVATGFAIEIPRGYEVQVRPRSGLAIKNGITCLNTPGTIDSDYRGEVKVILVNLGQEP
                     FEVRRGERIAQLVPAPVLRADFVEVGMLGESARGSGGFGSTGR"
     gene            complement(2818..3983)
                     /gene="coaBC"
                     /locus_tag="VHN55_03795"
                     /pseudo
     CDS             complement(2818..3983)
                     /gene="coaBC"
                     /locus_tag="VHN55_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404613.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
     gene            complement(3988..5520)
                     /gene="ubiB"
                     /locus_tag="VHN55_03800"
     CDS             complement(3988..5520)
                     /gene="ubiB"
                     /locus_tag="VHN55_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010545374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
                     /protein_id="HEX2803092.1"
                     /translation="MAGSATHLWRLLKWGRTLARHGALRGIESDPLTPPEVRRVARIA
                     RFGARIPDKPDYAAALQEIGPPAIKLGQTLSTRPDLIGAEAADNLSRLQDDLPPAPFP
                     AIKSAVEEAFGAPLETLFRSFDPEPIGAASIAQVHRATTTDGRDVAVKVLRPHIEEDF
                     ARAIDTYEWTAAQVEARGSEAARLRPRLVVAQFKQWTARELDLQREGASASELKENMV
                     AEPGYYVPEIDWRRTARRVLTLEWIEGIKLNDRDALVREGHDCKALAATLVRAFLRQA
                     IVDGFFHADLHHGNLFALPDGRIGAIDFGIMGRIDRRARVWLAEILYGLITGNYRRVA
                     EIHFEAQYVPAHHNVAEFATALRAAGEPIRGLPVKDISVGRMLESLFAITRDFDMPTQ
                     PHLLLLQKSIVMNEGVASKLDPDINMWETAEPFLHEWMRSELGPEAYYADRIVDTVRA
                     IKKLPDLINRMDYYYPPAGGAPPPPPLPEIEVVRPAHWAGYALAAIAGAMLAAIALFL
                     LI"
     gene            complement(5522..5773)
                     /locus_tag="VHN55_03805"
                     /pseudo
     CDS             complement(5522..5773)
                     /locus_tag="VHN55_03805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039314.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
     gene            5775..5985
                     /locus_tag="VHN55_03810"
                     /pseudo
     CDS             5775..5985
                     /locus_tag="VHN55_03810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459751.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
BASE COUNT         1053 a         1944 c         1972 g         1016 t
ORIGIN      
        1 acgatgcggg ttgcgcagtc gctctacgaa gacgggctga tcacttacat gcggaccgac
       61 ggggtggaca tggccgggga ggctatcagc gccgcccgcc gcgccatcac ggaccgctac
      121 gatgccgggt atgtccccga ccagccgcgc aagtacacga gcaaagtgaa gaatgctcag
      181 gaagcgcacg aggcggtccg gcccaccgac ttctcacagc gtcgggccgg ttccggcgac
      241 catgcgcggc tttacgagct gatctacaat cgcgcgctcg ccagccagat ggcatcggcg
      301 cgacttgagc ggacgacggt ggagctcgcc gacggggcag ggcgggctgt gcttcgtgcg
      361 acaggccagg ttgtcctttt ccccggctat ctcgcccttt acgaagaagg cgtcgacgaa
      421 aaagccgacg acgaagaggg cgctcgcatg ccggtgctcc ggcagggcga ctcgccggcg
      481 aagaccgggg tcgagtcgac gcagcatttc acgcagccgc cgccgcgcta ttcggaagcg
      541 agcctggtga agcgtctcga ggagctcggc atcgggcgac cctcgaccta tgcatccatc
      601 ctgcagaccc tgaaggaccg cgaatatgtg cgggtcgaaa aggcgcggtt cgtccccgag
      661 gagagtggaa ggctggtgac cgcgtttctt gagcggttct tcgaaaagta cgtcagctac
      721 gactacaccg ccgagctcga ggaggagctg gacgacgtgt ccggcggccg gctcgaatgg
      781 cacaagctgc ttcaggaatt ctggcgcgac ttccggccca aagccagtga ggtcatggac
      841 cagaagcctt cggaaatcac cgcccagatc gatgagttcc tcgctccatg gctctatccg
      901 gcgcgggaag atggctcgga cgctcggctg tgcccgcagt gcggcaacgg ccgactgtcg
      961 cttcggggcg gccgctatgg cgctttcatc gcctgctcga actaccccga gtgcaagtac
     1021 accctgaact tcgggcaggc cggaggccag ccgaaggcga gcgaggggcc gcaggacctg
     1081 gggaatggga tcgagctgaa gaccggccgt ttcggacagt acctggagcg ggagggcaag
     1141 cgcgcgtcga tacccaagga tgtgccgtcg gacgagctca cgactgaaat ggccgaacgg
     1201 ctgctgtccc tcccgcgcga gatcgggccg catccggaaa caggcaagcc gattacggcc
     1261 tcgatcgggc gatatggacc ctacctcgcc catgacggca aatatgcgaa gctgggatcg
     1321 actgccgagg tgttcgagac cggcatgaac gcggcggtgt caaagctcgc cgacgcggct
     1381 gccgcacgag gcggacagcg cggcggctcg cgggagccga tcgccgttct tggcgctcac
     1441 ccgcagagtg gcaaagagat caaggtgatg gccgggcgct atgggcccta cgccacagac
     1501 ggttcgacca atgcgacctt gccgaagggc gtcgaaccca atgccgtgac tctcgacgag
     1561 gccgttcgac tgatcgacga gcgagccgca aaggggcctg cgaagaagaa ggggcgcaag
     1621 aagaagaagc cttagccgca ggcgcggcag ccgcggtcct tggggattcg gatggttcgc
     1681 cattcgagcg acagcccgtc gaacaggaat agccgcccgc tcgagtcctc gccgatgccg
     1741 accagggacc ggatcgccat caaggctccg aagctgcctg ccgtggcggc gagcgctccc
     1801 aacacgccct gttcggcgca ggtgtcgcaa tcgtcggcat cgaaagcgtc gccgacgaag
     1861 cagcgatagc agggcttgtc cgcttcccat ccgcggaaca gcccgatctg gccctggaac
     1921 tgcacggccg cggcggagac gagcgggatc cggagcctgg tggccgcgtc gctgacggtc
     1981 agccgagtcg cgaaattgtc gcttccgtcg agcacaaggt cgtgcccgcc gatcagcttt
     2041 tcggcattgg cgctgtcgag ccgcttctgg atcgcaatcg cattcgcgtg gggattgagc
     2101 gcgcgggcga agtcagccga cagcactgcc tttggctggc ccagttggtc gtcgcggaag
     2161 atggtttgcc gctgcaggtt cgaccgttcg acctcgccgt cgtccacgat cgtcaaagtc
     2221 cggattcccg acgccgcgag agcgggaatc gctgcgcttc cgataccccc ggcgccgacg
     2281 attgcgaccc gcgccgtctt cagcctccgc tgccccacgc ctccgatctg cggaagcacg
     2341 atctggcgtg cgtagcggtc aagctcgtcg tcggtaagcg cagtcaccgt ccggtcgagc
     2401 cgaagccgcc cgagccccgc gcgctctcgc cgagcatgcc gacctcgacg aaatcagcgc
     2461 gcaagactgg cgccggtacg agctgggcga tccgctcgcc gcggcggacc tcgaacggct
     2521 cctgtccgag gttgacgaga atgaccttca cctcgccgcg atagtcgctg tcgatcgtcc
     2581 ctggcgtgtt cagacaggtg attccgttct ttatcgcgag accggagcgc gggcgcacct
     2641 gcacttcata tccgcgcggg atctcgattg cgaagccggt cgcgaccgcg tgccgctgcc
     2701 ccggatccag aatcaggtct tccgcggccg cgacatcgag cccgaccgcg tcttcgcttg
     2761 catagcgggg cagtggcagg ccttcgccgt gcggaagccg ggtcagcttg atctcgatca
     2821 tcgaagctcc ttcgaaattc gctcgacaag gtggcgcgcg accgcctcct tgctcatctc
     2881 cggccaatgc tcgacgccct cgctggtgac gagatgcacg cggttgactc gcccgcccat
     2941 cacctcgccg gaaacgtcat tcgcgacaat ccagtcggcg cccttcgcct ggcgcttggc
     3001 aacggcattg tcgacaatgt cgtccgtttc cgcagcgaag ccgatcagca gccgtggccg
     3061 cttcgcgctc gcggcaagct cggcaaggat atcgggattg ggaagaaact tcagctctgg
     3121 cgggccgtcg gccttcttga gcttcgcggg cgagggttcc acccgccagt cggcgacggc
     3181 cgctaccaaa atggcgattt cggccggcag ggcggcggtc accgcttcgg ccatctgctg
     3241 cgcggtctcg acatcgacac gccgaacgcc ttccggggtt tcgagcgcca caggaccagt
     3301 aacgagagtc actcgtgctc ccgcttcggc agcgaccgcc gcgatcgcga agccctggcg
     3361 ccccgacgag cggttggcga tcacccgcac cggatcgatc ggctcgtggg tcggcccggc
     3421 ggtgacgaga acgtgcttgc cttccaggct cacttcagga ggtcgccgat cttgtcgatg
     3481 atttcctgcg gctcgggcag ccggccgggg ccgaactcgc cgcacgccat atccccttcc
     3541 gcgggttgga tgacgcgaac tccgtcggcc tcgagctggc cgatgttccg ctttgtcgcc
     3601 gggtgctgcc acatccggac gttcatcgca ggcgcgacca ccaccggctt gtcggttgcg
     3661 agaagaagcg tcgtcgcgag gtcgtcggca aggcccgcgg ccatcttcgc cagcaggtcc
     3721 gccgtggccg ggcaaaccag gatgaaatcg gccgagcggg acagctggat gtgcccgatc
     3781 tcgacctcgt ccttcagctc ccatagtgac gtgtgcacct ggttttcgga cagagtcccg
     3841 aggctcatcg cagtgacgaa atgctcgccg cccttcgtca gcacggggac gaccgcgtgg
     3901 ccggccttct taagcaagcg gatcagttcc agcgacttgt aggcagcgat tccgccgccg
     3961 acgatgagga gtacgcgtgc catcgcttca gattagcaga aacagcgcga ttgcggccag
     4021 catcgcgccc gcgatcgccg caagagcata gcccgcccag tgcgccggac gaaccacctc
     4081 gatctccggg agagggggag ggggcggggc gccgccggcc ggcggataat aataatccat
     4141 cctgttgatc aggtcgggaa gctttttgat cgcccggacg gtgtccacga tccggtcggc
     4201 gtaataggct tccggcccga gttccgagcg catccattca tggagaaatg gctccgcagt
     4261 ctcccacatg ttgatgtcgg gatcgagttt gcttgcgacg ccctcgttca tgacgatcga
     4321 tttctgcagc agcaggaggt ggggctgggt aggcatgtcg aagtcgcggg tgattgcgaa
     4381 caggctctcg agcatgcgcc cgaccgatat gtccttcacc gggagccccc tgatcggctc
     4441 gcccgcggcc cgcaacgcgg ttgcgaactc ggcgacattg tggtgggcgg gcacatattg
     4501 cgcttcgaaa tggatctccg ccacacgccg gtaattgccg gtaatgaggc cgtataggat
     4561 ctcggcgagc cagacccggg cgcggcggtc gatccggccc atgatcccga agtcgatcgc
     4621 tccgattctc ccgtcgggaa gcgcgaacag attgccgtga tgaaggtcgg catgaaaaaa
     4681 gccgtcgacg atcgcctggc gaaggaacgc ccgaacaagg gtcgctgcga gcgccttgca
     4741 gtcgtgtcct tccctaacga gcgcgtcgcg gtcgttgagc ttgatccctt cgatccactc
     4801 cagggtgagg acccggcgcg ctgtccggcg ccagtcgatc tccgggacgt agtatccggg
     4861 ctcggcgacc atattctcct tcagctcgga cgccgaggcg ccctcgcgct ggaggtcgag
     4921 ttctcgagcg gtccattgct tgaactgggc gacgacaagg cgcggacgca gccgcgccgc
     4981 ttcgctgccg cgagcctcga cctgcgcggc agtccattca taggtatcga tcgcgcgtgc
     5041 gaaatcctcc tcgatgtgcg ggcgaagaac cttgaccgcg acgtcgcggc cgtcagtcgt
     5101 cgtcgcgcga tggacctggg caatcgaagc tgcgccgatc ggttcggggt cgaatgatcg
     5161 gaacagcgtt tcgagcggcg ccccgaatgc ctcctcgacc gctgacttga tcgccgggaa
     5221 cggcgccggc ggaaggtcgt cctgcagcct cgacagattg tcggcggcct cggcgccgat
     5281 caggtcgggc cgagtcgaca gcgtctgtcc gagcttgatt gccggcggcc cgatctcctg
     5341 aagcgcggca gcatagtcgg gcttgtcggg aattcgcgct ccgaagcgag cgatccgggc
     5401 gacccggcgc acttcgggag gagtcagcgg atcgctctcg atgccgcgaa gcgcgccgtg
     5461 ccgagcgagc gtccggcccc atttgagaag ccgccacagg tgggtcgccg aacctgccaa
     5521 gctagatttt ccagccgctg tgaatgcaga ccagcccgcc caggatcggt tcggcccgcg
     5581 attgccgaaa tcccgcctcg gcgatcatct tccggaactg ctcgggcttg ggaaagcggc
     5641 ggatcgattc gacgagatag cgataactct cctcgtcctt cgccaccgcg cgcccgattc
     5701 gcggtatcag cctgctcgca tacctctcgt agaggtcggc aaagcccggc cactcgctgg
     5761 tggagaattc gagcttcgat gcctatacga tcgcctttgg aatccggaac gtcacagacg
     5821 tcccggctgc actgaaggag gcgcaccggg tgctgaggca cggaggacgc ttcttctgcc
     5881 tcgaattctc gaccagcgaa tggccgggct tcgccgacct ctacgagcgc tatgcgagca
     5941 agctgatccc gcgcatcggg cgcgccgtgg cgaaagacga ggaga
//
LOCUS       DATAKH010000095         2405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_12407,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000095 DATAKH010000000
VERSION     DATAKH010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12407"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /gene="bfr"
                     /locus_tag="VHN55_03815"
     CDS             complement(<1..368)
                     /gene="bfr"
                     /locus_tag="VHN55_03815"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEX2803093.1"
                     /translation="MKGNPKIIELLNEALKAELTAINQYWLHYRMLDNWGVTRLAEFE
                     RHESIDEMKHADRFSERILFLEGLPNFQALGRLRIGESVEEILKADLEAEYEAVEMYR
                     NGVTGCEKAHDYVSRDLFAEV"
     gene            complement(491..685)
                     /locus_tag="VHN55_03820"
     CDS             complement(491..685)
                     /locus_tag="VHN55_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX2803094.1"
                     /translation="MILCVCNAITEDEVRELARGGARTPEEAYAILGFEPQCGSCLCY
                     AQDLIDKERRALRGKLRAVA"
     gene            complement(729..2180)
                     /locus_tag="VHN55_03825"
                     /pseudo
     CDS             complement(729..2180)
                     /locus_tag="VHN55_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010187209.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
     gene            2170..2405
                     /locus_tag="VHN55_03830"
                     /pseudo
     CDS             2170..2405
                     /locus_tag="VHN55_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017499860.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
BASE COUNT          422 a          778 c          766 g          439 t
ORIGIN      
        1 acctcggcga agaggtcgcg gctgacgtaa tcgtgcgcct tctcgcaccc ggtgacgccg
       61 ttgcggtaca tctcgacagc ctcatactcg gcttcgagat cggcctttag gatctcctcg
      121 acgctctcgc cgatgcgcaa acgcccaagc gcctggaaat tgggcagccc ctcgagaaac
      181 aggatccgct ctgaaaagcg gtcggcatgc ttcatctcat cgatcgactc gtgccgctcg
      241 aactcggcga ggcgcgtgac gccccaattg tcgagcattc ggtagtgcaa ccaatattgg
      301 ttgatcgcgg tcagctcggc cttgagcgcc tcgttgagaa gctcgatgat cttgggatta
      361 cccttcatgc cgtcctcctg ctgaggaagg cctctagccg atcaatggtt cccgaaaaag
      421 cgaaaaaatg gctggaatcc gccatttctt tgcacttgat agtcagttgc agttggatcg
      481 gaagggctgc tcaggcgacg gcgcggagct tgccccggag cgcccggcgc tctttgtcga
      541 tcaggtcctg cgcgtaacac aggcagcttc cgcattgcgg ctcgaacccg agaatcgcat
      601 aggcttcttc gggcgttctc gcgccgccgc gagcaagctc gcgaacctcg tcttccgtga
      661 tggcattgca gacgcacagg atcatcgcgc gccttatagt gctattgcga tacattcgca
      721 atatttgcct aggccagtgc cgcgtcctcg cccatcagtc gcgggaagaa actttcgtgc
      781 gcggcgcgca ggtcggcgag cggcacgcaa taatcgccgt gagggagctc gaagatgagc
      841 cgcttgcccg cggttcgccc gatcggctcg acctggactc cggcggcgtc ggcgccggta
      901 aggaagtcga gcaggtggcc gtcgtcgatg gtggcgagat agaggccctg gtcctcggcg
      961 aagaactggc gcgcgacgtg ccctggtccc gccggctgga tgagggcccc gacattaccg
     1021 gccagcgcca tctccgcgat cgcaaccgcg aggccgccat cggaaacgtc atggaccgcg
     1081 gtcagtgatc cggccgcgac ttgttcgcga acgaacttgc cggtgcggcg ctcgtcggca
     1141 agatcgaccg gcggcggcgg gccttcggcg cggccgtgga tctcgcgaag ccacaatgac
     1201 tggccgagat ggccgccgcg ggtgccgata acgaccagca cgtctcccga ttgcttgaac
     1261 ccgatcgtcg ccatcttcga aaaatcgtcg agcaatccga caccgccgat cgccggcgtc
     1321 ggaaggattg ccagcgacga gccgtcgtcg gccttggttt cgttgtagag cgagacgttg
     1381 ccgctcacga cggggaaatc gagggtccgg caggcgtcgc cgataccttg aacgcagccg
     1441 acgaactggc ccatgatctc gggtcgttgc gggttgccga aattgaggca gttggtgatc
     1501 gccaacggct tcgcgccgac cgcgcacagg ttgcgatagg cctcggcgac cgcctgcttg
     1561 ccgccctcga ccggatccgc atgacaatag cgcggcgtgc agtcggcggt catcgccagc
     1621 gcctttttcg tcccgtgcac gcggacgacc gcggaatcgc cgcccggagc ctgcacggtg
     1681 tcggcgccca cggtctggtc atattgctcc cacacccaac gccgcgaggc gaggttgggc
     1741 gagccaacca gcttcagaag atcggaagcg atgtcggcgg tttccgggat gttgacgagg
     1801 ggctcgggag ccttcgggat cgcatacggc cgctcgtaca gcggcgcttc gtcggcgagc
     1861 gggtcgagcg ggatgtcggc gacggtctcg ccgttccaca ccagctccat acggccggta
     1921 tcggtgaccg tgccgataac cgcgaagtcg agctcccact tcttgaagat cgcctcggcc
     1981 tcggactcgc ggccgggctt gagcaccatc agcatccgct cctggctctc cgagagcatc
     2041 atttcatagg gggtcatccc ttcttcgcgg cacggcaccc tgttcatgtc cagccggatc
     2101 ccgaccccgc ccttgctcgc catctcgacc gacgaagagg tgaggccggc ggcgcccata
     2161 tcctggatcg cgacgatggc aagcgccgac ttctccgagg atagcgagga gaagcgcccg
     2221 acggtgcagg tcggtgaccc gttcacagag aaattgctga tcgaagcctg cctcgagctg
     2281 atggcgtccg atgccatcgt cgcgatccag gacatgggcg ccgccggcct cacttcctcc
     2341 tcggtcgaga tggccagcaa gggcggcgtc ggcatcgagc tgatcatgga cgacgtcccc
     2401 cagcg
//
LOCUS       DATAKH010000096         5330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2053,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000096 DATAKH010000000
VERSION     DATAKH010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5330
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2053"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VHN55_03835"
     CDS             complement(<1..452)
                     /locus_tag="VHN55_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008600045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2803095.1"
                     /translation="MAGLSALDSLEIPSLEGKVSDEEWAIRVDLAAAYRMVAYYGWDD
                     LIFTHLSARIPGPEHHFLLNPYQLMFEEVTASSLVKVDVQGNPVDPTPFITNPAGFTI
                     HSAIHMAREDALAVMHLHTPAGQAVAAHSEGLLPLTQTAMLVRQDIAF"
     gene            complement(479..1117)
                     /gene="maiA"
                     /locus_tag="VHN55_03840"
     CDS             complement(479..1117)
                     /gene="maiA"
                     /locus_tag="VHN55_03840"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010405107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HEX2803096.1"
                     /translation="MLPVLHDYHRSSAAYRVRIALNMKGVDYESRTVNLLEGEQKGAD
                     YRGRNPQGLVPMLEIDGQRLTQSLAIIVYLDQLFPEPSLIPADPADGAHVRAMAMAIA
                     CDIHPLNNLRVLKYLSGPLGQSQEARDDWYAHWVTEGFEALEVMAAQRAGEFLFGDTP
                     SLADICLVPQMYNARRFNVPVDVYPTLVRADSNATALPAFAAAHPEQQEAMA"
     gene            complement(1129..1521)
                     /locus_tag="VHN55_03845"
     CDS             complement(1129..1521)
                     /locus_tag="VHN55_03845"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX2803097.1"
                     /translation="MFEMRFTAAPEHIDELGHVNNAVWVQWIQQLAVAHWEAVSDPAH
                     RDLYFWVVVRHEVDYVRPAHDGDRVTARTWVGEAPQGARFDRFVEFTGEDGRACVRAR
                     TVWAIIDKASGRPIRVPPEVVAPFREPE"
     gene            complement(1521..1928)
                     /locus_tag="VHN55_03850"
     CDS             complement(1521..1928)
                     /locus_tag="VHN55_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020817955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HEX2803098.1"
                     /translation="MLRSTRRNIKRARSLRRKMSLPEVLLWQRLRRRPEGLKFRRQHP
                     AGPYVLDFYCESARVCIEVDGAAHGMGDGPASDQRRDTYLRNGGIRTLRIAARDVIDN
                     LDGALQLIVRECRATPLHQTASPSGPPPLQGGY"
     gene            complement(1976..4036)
                     /locus_tag="VHN55_03855"
     CDS             complement(1976..4036)
                     /locus_tag="VHN55_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014848746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX2803099.1"
                     /translation="MNKIRDLPPPPQAEQRRHSFEHHGHEIEDPWAWLRDQGYPNVTD
                     ENVLGYLKAENEYFEAAMEPHKALVDQLFEEMKGRIKEDDSSVPIRDGDWLYWWKFDA
                     GAQYRKWYRRPASGGDEQLIFDEPAEAEGTEYFRLGALESSPDGKLLATMADANGSER
                     FVLKVRDLATGKDIETITEVGIGSPVWTSDSTGLVFTEVNDNWRSYRARYHRLGTPVS
                     EDRTLYEETEDLGFSVGVDDSQDRSLIFIATGDNTTTEVRFVPADDPLAEPVLIAPRK
                     EGREYSPDAAHGKLWIVTNDDHVNFRLAEADVSNPGEWKTVIPGSDRVYLMGAASYRD
                     HIAMHQRVDGLDQLILRTYDGEETRIPFGEASYSAGFAGNPEFAPDAYRIGYSSMVTP
                     VTVYDYHPGNGELEVLKVQEIPSGYDASQYATERLMVPARDGKQVPVSVVYPEGFDKN
                     GEGKLYLYAYGAYGHAIPPGFSSSRISLLDRGWAFAIAHIRGGDDLGYNWYLEGKLAK
                     RNNAFTDFVDAARGLVEAKFTRPGRIAINGGSAGGELMGVVANTDPDLWGAVVADVPF
                     VDVLNTMLDDSLPLTPGEWPEWGNPLKDKAAFELIRSYSPYDNVKAQDYPPMLITGGL
                     NDPRVTYWEPAKWAAKLRANKTDDNLLLLKTNMGAGHGGKSGRWDSLREVAEAFAFVL
                     TQVE"
     gene            complement(4123..>5330)
                     /locus_tag="VHN55_03860"
     CDS             complement(4123..>5330)
                     /locus_tag="VHN55_03860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803100.1"
                     /translation="SMAASFAIPLAALTFPSGRFEPRWSLWGLPLLVVGISSRYWARG
                     LPAVEQISLVVFALLTIAVIAKRYSLLPQGVQRQQVKWAALGFVLFLLLLLVSLALQL
                     ADQRTTDNGLHFFLLIAFSIVEALAVLALVGGLLVSLLRYRLYDADAAISRSAVYAAL
                     TLSLIAIFAATEKFIEIMGEQYFGSAIGSASGVIAAGFAAVMIAPLHARMSNWAERRF
                     QRNLIRLRRDLPLLVGDLRETVSPERLADIVLEKIAGGVRSSRSALIGVGAEGPAVLA
                     SLDVAAEEVRSWMADWSPSSRHDALDCARDDMLFPIRIPLHAEGAGTVGWILLGPRPD
                     GSFYGKDEREALLEIADCVARGISVARRRAERETAHSRATELLTRRVSALESMVKRLR
                     GSGATAAAT"
BASE COUNT          943 a         1748 c         1693 g          946 t
ORIGIN      
        1 tggaaggcga tgtcctggcg gaccagcatt gccgtctggg tcagcggcag tagcccttcc
       61 gagtgcgcag cgacggcctg gcccgccggt gtgtgcaggt gcatcacagc aagcgcgtcc
      121 tcgcgcgcca tgtggatcgc agaatgaatg gtgaagccgg ccgggttggt gatgaagggc
      181 gtggggtcga ccggattgcc ctggacatcg accttgacca gcgacgaggc ggtcacctcc
      241 tcgaacataa gctggtaggg attgagcagg aaatgatgct ccggcccggg aatccgtgcc
      301 gaaagatggg tgaagatgag gtcgtcccag ccgtaatagg cgaccatccg gtaggccgcg
      361 gcgagatcga cccggatcgc ccattcctcg tcgctgacct tgccttccag cgacgggatc
      421 tcgagcgaat cgagcgcgga caggcccgcc atcccgcggt tcatgctctc gacccggttc
      481 atgccatcgc ctcctgctgc tccgggtgcg cggccgcgaa agcgggaagc gccgtagcgt
      541 tggagtccgc gcgaaccagg gtcggataga cgtcaaccgg aacgttgaac cgccgcgcgt
      601 tgtacatctg cgggaccagg cagatgtcgg ccagactcgg cgtatcgccg aacaggaact
      661 caccggcccg ttgcgccgcc atgacctcca gcgcttcgaa cccctcggtc acccaatgcg
      721 cgtaccagtc gtcgcgcgcc tcctggctct gcccaagcgg gccgctcaga tatttgagca
      781 cccgcaaatt gttgagcgga tggatgtcgc aggcgatcgc catcgccatc gcccggacgt
      841 gggccccgtc tgccggatcg gcgggaatca gcgatggctc gggaaaaagt tggtcgaggt
      901 agacgatgat cgccaggctc tgggtgagcc gctgcccgtc gatctccagc atcggcacca
      961 gcccctgcgg gttgcggccg cgatagtctg cgcccttctg ctcgccttcg agcaggttca
     1021 ccgtccggct ctcgtaatcg acccccttca tgttgagagc gatcctgacc cggtaggccg
     1081 cggaggaacg gtgatagtcg tgaaggaccg gcagcatcgc tacgatcctt actccggctc
     1141 gcggaacggc gctactacct ccggagggac acggatcggg cggccgctcg ccttgtcgat
     1201 aatcgcccac acggtccggg cgcggacgca ggccctgccg tcctctcccg tgaactcgac
     1261 gaagcggtcg aaccgcgctc cctgcggggc ttcgccgacc caggtccgcg ccgtcacccg
     1321 atcgccgtca tgggccggac gcacatagtc aacctcgtgc ctgaccacga cccagaaata
     1381 gaggtcgcgg tgcgccggat cggataccgc ctcccaatgc gcgaccgcca attgctggat
     1441 ccactgcacc cagaccgcat tgttgacgtg cccgagctcg tcgatgtgct ccggcgcggc
     1501 cgtgaaacgc atttcgaaca tcaatatcct ccctgaaggg gagggggacc ggacggcgaa
     1561 gcagtctggt ggaggggtgt tgcacgacat tcgcgaacaa tcagctgcaa cgccccgtcc
     1621 agattatcga tcacgtctcg cgccgcaatg cgaagagttc gaatacctcc attgcgcaaa
     1681 taggtatcgc ggcgctgatc gctggccggg ccatcgccca ttccgtgtgc tgcgccatcc
     1741 acctcgatgc agaccctcgc cgattcgcag tagaagtcga gcacgtaggg cccggcaggg
     1801 tgctgccggc gaaacttcaa gccttcgggg cgcctgcgca accgctgcca aagcagcact
     1861 tccggcaggc tcatcttcct gcggagcgat ctggcgcgct tgatatttct tctcgtactt
     1921 ctgagcattc ccctccacca ccttcggtgg tcccctcccc tgaaggggag gattttcact
     1981 ccacctgcgt caaaacgaac gcaaacgcct ccgccacttc gcggaggctg tcccagcggc
     2041 cggacttgcc gccgtggccg gcgcccatgt tggtcttgag caggaggagg ttgtcgtcgg
     2101 tcttgttggc gcgaagcttc gcggcccatt tggccggctc ccaataagtc acgcgggggt
     2161 cgttcaggcc gccggtgatc agcatcggcg gataatcctg cgccttcaca ttgtcgtacg
     2221 ggctgtagct ccggatcagc tcgaacgccg ccttgtcctt caagggattg ccccattcgg
     2281 gccactcgcc gggggtcagc ggaagcgaat cgtcgagcat ggtgttgagc acgtcgacga
     2341 acgggacatc ggccactacc gcgccccaca ggtccgggtc ggtattggca accacgccca
     2401 tcagctcgcc gcccgccgag ccgccgttga tcgcgatccg cccgggcctc gtgaacttcg
     2461 cctcgaccag gcctctcgcg gcgtcgacga agtcggtgaa cgcgttgttc cgcttcgcta
     2521 atttgccttc gagataccaa ttgtagccga ggtcgtctcc gccgcggata tgggcgatcg
     2581 cgaaggccca gccgcggtcg agcaggctga tccgcgagga cgagaatccg ggcgggatcg
     2641 catggccgta ggcgccgtag gcgtagagat agagcttgcc ctcgccgttc ttgtcgaaac
     2701 cttcggggta caccaccgac accggcacct gcttgccgtc gcgcgccggc accatcagcc
     2761 gctcggtcgc atattgcgac gcatcgtagc cggacgggat ttcctggacc ttcagcacct
     2821 ccagctcgcc gtttcccggg tggtaatcgt ataccgtgac gggggtcacc atcgacgaat
     2881 agccgatccg gtaggcgtca ggcgcgaact ccgggttgcc ggcgaatccg gcgctgtagc
     2941 tcgcctcgcc gaacgggatg cgcgtttcct cgccgtcgta ggtgcgaagg atcagctgat
     3001 cgagcccgtc cacgcgctgg tgcatggcga tatggtcgcg atagctcgcc gcgcccatca
     3061 gatagacccg gtcggagccg gggatcaccg ttttccattc gcccgggttt gaaacatcgg
     3121 cctcggcgag ccggaagttc acgtgatcgt cattggtgac gatccacagc ttcccgtggg
     3181 cggcatcggg cgaatattcg cggccttcct tgcgcggcgc gatcagcacc ggctcggcga
     3241 gcggatcgtc ggctggaacg aaccgcacct cggtcgtggt attgtcgccg gtggcgatga
     3301 agatcaggct tcggtcctgc gaatcgtcga ctccgaccga gaagccgagg tcctcggtct
     3361 cctcgtagag cgtcctgtcc tcgctaacgg gcgttccgag ccggtggtag cgggcgcggt
     3421 agctccgcca attgtcgttg acctcggtga agaccaggcc ggtgctgtcg ctggtccaaa
     3481 ccggcgagcc gatgccgacc tcggtgatcg tctcgatgtc cttgccggtc gcgaggtcgc
     3541 ggaccttgag cacgaaccgt tccgaaccgt tggcgtcggc catcgtagcg aggagcttgc
     3601 cgtcagggct cgactccagc gccccgaggc ggaaatactc cgtgccctcg gcttcggcgg
     3661 gctcgtcgaa gatcagctgc tcatcgccgc cgctggccgg ccgccggtac catttccggt
     3721 actgcgcccc cgcgtcgaac ttccaccagt agagccagtc gccgtcgcgg atcgggacgg
     3781 atgaatcgtc ctccttgatc cgccccttca tctcctcgaa cagctggtcg accagcgcct
     3841 tgtgcggctc catcgccgcc tcgaaatatt cgttttccgc cttcaaatag ccgagcacgt
     3901 tctcgtccgt gacgttggga tagccctggt cgcgaagcca ggcccacggg tcctcgatct
     3961 cgtggccgtg atgttcgaag ctgtggcggc gctgttcggc ctggggcggc ggcgggaggt
     4021 cgcgaatttt gttcatgacc cgctcttagc gcgctagccc gcgaccgaaa gccgaaacgt
     4081 tgcgatgcag gtccgcattg cgaacgcgga tatctgtggg agctatgttg cggccgcggt
     4141 cgcgccggaa cccctcagcc tcttgaccat ggactcgagg gcgctgactc gccgggtgag
     4201 caattcggtt gcgcggctgt gcgcggtttc gcgctccgcg cgacggcgag cgaccgaaat
     4261 cccgcgcgca acgcaatcgg caatctcaag tagggcttcg cgttcgtcct tgccatagaa
     4321 gctgccgtcc ggccgtgggc caagcaggat ccagcccact gtgccggcac cctcagcatg
     4381 gagcggaatg cggatcggga acagcatgtc gtcgcgtgcg cagtcgagcg catcgtggcg
     4441 gctcgacggc gaccaatccg ccatccacga gcgcacttcc tctgccgcga cgtcgaggga
     4501 ggcgaggacg gccggccctt ccgcgcctac gccgatgaga gcggaccggc tcgagcggac
     4561 gccgccggca atcttctcca aaacgatgtc ggcaaggcgc tccggcgaaa cggtctcgcg
     4621 gaggtccccg accagcagcg gcaagtcccg gcgcaggcga atgagattcc gctggaaacg
     4681 gcgctcagcc caattgctca tccgggcgtg gagcggtgcg atcatcaccg ccgcgaagcc
     4741 ggctgcgatc acgcccgacg ccgaaccgat tgccgatccg aaatattgct cgcccatgat
     4801 ctcgatgaac ttttcggtcg ctgcgaagat cgcgatcagg cttaacgtta gcgcggcgta
     4861 gaccgccgat cggctgatcg cggcatcggc gtcatacagc cgatatcgga gaagcgagac
     4921 cagcagcccg cccaccagtg cgagcaccgc taacgcttca acaatgctga atgcaataag
     4981 caggaagaag tgcagtccgt tgtccgtcgt gcgctgatcc gcgagttgca gcgccaagct
     5041 gaccaagagc aaaagcaaga acagcacgaa gccgagcgca gcccacttca cctgttgccg
     5101 ctgcactccc tgcggaagta gcgaatagcg tttcgcgatg actgcgatcg taagcagcgc
     5161 gaagacgacc agggaaattt gctcaaccgc aggaaggcca cgcgcccaat atcggctgga
     5221 gatgccaaca acgagcagcg ggagccccca cagcgaccag cgcggttcaa accggccgct
     5281 ggggaaggtg agggcggcca acggaatggc gaatgatgcg gccatgctga
//
LOCUS       DATAKH010000097         7639 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_27983,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000097 DATAKH010000000
VERSION     DATAKH010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7639
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27983"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VHN55_03865"
     CDS             <1..524
                     /locus_tag="VHN55_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010402973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2803101.1"
                     /translation="KVAVIGGGNTAVEEALYMTNHSHDVTLIHRRDSLRAEKILQDRL
                     FANEKIEVIWDSEVVEFVAGGDPEALVGLDLRNKRTGEVSRLDVEGAFVAIGHSPATE
                     LFAGKLELDEDGYIKVAPGTTRTSVEGVFACGDVMDKIYRQAVTAAGTGCMAALDAEK
                     YLAAQEYEAVAAE"
     gene            627..2024
                     /locus_tag="VHN55_03870"
     CDS             627..2024
                     /locus_tag="VHN55_03870"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2803102.1"
                     /translation="MATQGIEEVTENAIRAVARDCGSLSIECSDVAGYVSGVAGRISE
                     NLKMLDQLEEVTTRLLADQGRVSDSTDEARLLAEQAKAKLDAGRTAIEDTIGGFKGLT
                     ELVVQLGERMAGFASAMAQVQTVSSTIEAIARKTNMLALNATIEAARAGDAGRSFAVV
                     AAEVKKLAHDTRAATSQIAETIGELTREAGAVTSEIKTGVDRSREAQKGFGQISDTVR
                     EVSEIVAMVDRQTEGIAHSTSMIQTSVDRVKAGLTDFAGDARDNGQELVSAKERLNHL
                     EHLSNTMLDTLANSGAEIDDTPFILKAQDAMRAIQAEVERGIAAGEVSESDVFDRNYK
                     LIEGSNPAQYDTGFCDFADKHIRPILDRFKATDSRIIGSAITDVNGYLPTHLSERCQK
                     PGPDPVWNDANCRNKRIFMDETTRNAINSNKPAMLATYRMELGDKYIPVKNVFVPVWF
                     NGRRWGNFELAYRDE"
     gene            complement(2071..2856)
                     /locus_tag="VHN55_03875"
     CDS             complement(2071..2856)
                     /locus_tag="VHN55_03875"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX2803103.1"
                     /translation="MTTVFRMSVPVTLEVPQQMAIPTQEVLAGEYDCGLCGERLTVAD
                     IGANIGAFSIWASARWPGSSITAYEPHPETFAMLQRNLAPFAGISTVNAAIYPSSDER
                     ISFFARYPGDGEAGVVGCSRDTFSQIPDKQSFDVPVIHPAKIPSTDVVKIDAEGSEAE
                     ILRHMDLSGTSLVLLEFQNDSNRAAIKQLLEPNFDLLLEEEFRWDPLLAYGYNESLAG
                     DHYGHLFFASKTGCKLSYPKSDKRPRASWRFIASEIAHKLRGD"
     gene            complement(2853..3980)
                     /locus_tag="VHN55_03880"
     CDS             complement(2853..3980)
                     /locus_tag="VHN55_03880"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX2803104.1"
                     /translation="MWRTAARRALDAIALARSADAREFLSASLLREFSYAHGLEKNLG
                     PPRIYNLETTNHCPYKCVMCPRTYEMTRSLGHMDIGLFRDIVDQVEPGWQKNTVRDTP
                     TMQLLHFGEPMVYPHFKESVEHCHRRGFNVYISTNPSVWTERRIEEILESQLDHLCVM
                     VDGMDDETSMAIRGPAASFVRGEKNLKELARRKADRGLSKPKIIVQMIRQKRNQHQWE
                     LFRNYWNDIPGIDGAYLDYFSTFSGGTDAINTIADDLAQFDSDQADELARRHYLAEFP
                     CAYPWHSVSVTWQGKVVPCCRDVNEAVVLGDLRKDTLKKIWNDEPIRALRREFTTRKV
                     ATPLCASCTENSLEIGLPKHYPATAVIKMRNALTPAPVEQP"
     gene            complement(4099..4776)
                     /locus_tag="VHN55_03885"
     CDS             complement(4099..4776)
                     /locus_tag="VHN55_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010545538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803105.1"
                     /translation="MAINRFVDRKAVSAGEAHLVRVAEDGGARHPYLCSLVEASGPHA
                     PRDLADAVHLLCSIHGHHPGLIEQALEIAPEGAAKDWLDRAADGFARERLYLVRLTTA
                     VGPIPSTPGAAETQATLIAQRHALEVLAKSERRGCALGAATALVSDWWPIRRLLDRAA
                     ARSGIDAPAPSLPDEASILAAVAGECDTQASERALRFGGEQMLLQNRGLFDLLEARAA
                     ARERWEA"
     gene            complement(5160..5504)
                     /locus_tag="VHN55_03890"
     CDS             complement(5160..5504)
                     /locus_tag="VHN55_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0080135 - regulation of cellular response
                     to stress [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HEX2803106.1"
                     /translation="MTTATTDFSNNRDTGREDKPTALPLRGDTLLGVCEAVGQDLGVN
                     PTWLRITFAALLLWNPEVVVIAYLGLGLVVAATRWFFPARTATQSVTAVAAAPETASV
                     VQESEKEELLAA"
     gene            5750..6169
                     /gene="panD"
                     /locus_tag="VHN55_03895"
     CDS             5750..6169
                     /gene="panD"
                     /locus_tag="VHN55_03895"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014646751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEX2803107.1"
                     /translation="MIRVMLKSKIHRATVTQADLDYVGSIAIDRALMDAADLIEGEQV
                     VIADITNGARLETYVIPAPAGSGTVGINGAAAHLVAQGDLVIIMSYAMLEEAEARRSK
                     PRVVHVDERNRIVARGEDPAEPVPGAAGQKRAVNAAA"
     gene            complement(6166..6468)
                     /locus_tag="VHN55_03900"
     CDS             complement(6166..6468)
                     /locus_tag="VHN55_03900"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2803108.1"
                     /translation="MTVQVQDLRRASRRRVLMRTTLITSAGAQQARVRDLTSTGAGIA
                     CQVPIEHGSDVILKRGDLFIAARVVWVDGNSAGLEFYREIPLGELASLFNTVFETA"
     gene            complement(6892..7119)
                     /locus_tag="VHN55_03905"
     CDS             complement(6892..7119)
                     /locus_tag="VHN55_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803109.1"
                     /translation="MAAYRLYCLDGVGRISLAEWISATDDRDAICQAHDKNLDALKCE
                     IWKGERLVATLEAEELSGLATTSDVQHPGGG"
     gene            7276..7446
                     /locus_tag="VHN55_03910"
     CDS             7276..7446
                     /locus_tag="VHN55_03910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803110.1"
                     /translation="MKHYRVNKLAKPGGVVVKKKDILATDDREAVRHAEDSDDCPVCD
                     VLKNGETIARIH"
BASE COUNT         1354 a         2402 c         2537 g         1346 t
ORIGIN      
        1 agaaggtcgc ggtgatcggt ggcggcaata ccgcggtcga ggaagcgctg tacatgacca
       61 accatagtca cgacgttacg ctgatccacc gccgcgattc gttgcgagcc gagaagatcc
      121 tccaggaccg gctgttcgcc aacgagaaga tcgaggtcat ctgggacagc gaagtcgtcg
      181 agttcgtcgc tggcggtgat cccgaggctc tcgtcggcct cgacctgcgc aacaagcgca
      241 ccggcgaggt cagccggctc gacgtcgaag gcgccttcgt cgccatcggc cacagccccg
      301 caaccgagct gttcgctggc aagctcgagc tggacgaaga cggctacatc aaggtcgcgc
      361 caggcacgac aaggacgagc gtcgaaggcg tcttcgcctg cggcgacgtc atggacaaaa
      421 tctaccgcca ggcagtgacc gccgcgggca ccggctgcat ggctgccctg gacgccgaaa
      481 aatacctcgc tgcgcaggaa tatgaggccg tggcggcgga gtagcggcag cctttctgcc
      541 gtgcctttgc ggggcgccgt ggttaaccaa gacgtaggac attgcccgta tgccgctccc
      601 aagcatttcg gggagcgggc ttggccatgg ccacacaggg catcgaggaa gttaccgaga
      661 acgcgatccg cgcggtcgcg cgcgattgcg ggtccttgtc gatcgaatgc agcgatgtcg
      721 ccggctacgt gtcaggggtc gccgggcgaa tcagcgagaa cctgaagatg ctcgaccagc
      781 tcgaggaggt gacgacccgc cttctcgccg accagggccg agtctccgat tccaccgacg
      841 aggcgcggct tctcgccgag caggctaagg ccaagctcga cgccggccga accgcgatcg
      901 aggacacgat cggcggcttc aagggcctga ccgagctcgt tgtccagctg ggcgagcgaa
      961 tggcgggctt cgcttcggcg atggcccagg tccagaccgt ttcctcgacc atcgaagcca
     1021 ttgcacgcaa gaccaacatg ctcgcgttga acgcgaccat cgaggcggcg cgtgcgggtg
     1081 acgccggccg cagctttgct gtcgtcgccg cggaggtgaa gaagctggcg cacgacacgc
     1141 gcgcagcgac tagccagatc gcggagacga tcggcgagct gacccgggag gccggcgccg
     1201 tcacctcgga aatcaagacg ggggtcgatc gcagccgcga ggcgcagaag ggctttggcc
     1261 agatcagcga caccgtgcgc gaagtcagcg agatcgtcgc catggtcgac cgccagacgg
     1321 agggcatcgc ccattccacc agcatgatcc agaccagcgt cgaccgggtg aaggcggggc
     1381 tgaccgactt cgccggcgat gcgcgcgaca acggccagga actggtctcc gccaaggaac
     1441 ggctcaacca cctcgagcac ctgtcgaaca cgatgctcga cacgctcgcc aattccggcg
     1501 ccgagatcga cgacacgccg ttcatcctca aggcacagga cgcgatgcga gccatccagg
     1561 ccgaggtcga gcgcggaatc gccgccggcg aagtcagcga aagcgatgtc ttcgatcgta
     1621 actacaagct tatcgagggc agcaacccgg cccaatacga cacaggcttc tgcgatttcg
     1681 ccgacaaaca catccggccc atcctcgacc gcttcaaggc gaccgacagc cgaatcatcg
     1741 gctcggcgat caccgacgtg aacggatatc ttccgaccca cctgtcggag cgctgccaga
     1801 agccgggacc ggatccggtg tggaacgacg ccaattgccg caacaagcgc atcttcatgg
     1861 acgagacgac ccgcaacgcg atcaactcga acaagccggc gatgctcgct acctaccgga
     1921 tggagctcgg cgacaaatat atcccggtca agaacgtgtt cgtcccggtg tggtttaacg
     1981 gccgccgctg gggcaatttc gagctcgcct accgggacga atgatgagcg caggccagtc
     2041 cgggggactg gctgagcacg tcatcgcgcc tcagtctccc ctgagcttgt gggcgatctc
     2101 ggaggcgatg aaccgccagc tcgctcgcgg gcgcttgtcg cttttcggat agctaagctt
     2161 gcaccccgtc ttcgaggcga agaacaggtg gccgtaatgg tctccggcca ggctttcgtt
     2221 gtaaccgtag gcgaggagcg gatcccagcg gaattcctcc tcgagcagca agtcgaaatt
     2281 aggttccagc agctgcttga tcgctgcgcg gtttgaatcg ttctggaatt cgagcaggac
     2341 cagtgacgtt cccgacaggt ccatgtggcg aagaatctct gcttccgagc cttcagcgtc
     2401 gatcttgacg acgtccgtgc ttgggatctt ggccgggtgg atcaccggca cgtcgaaact
     2461 ctgcttgtcc gggatttggc tgaacgtgtc ccggctacat ccgactactc cggcctcgcc
     2521 gtcgccggga tagcgggcga agaaggaaat tcgctcgtcg ctgctaggat agattgcggc
     2581 attgaccgtg ctgatgcccg cgaacggcgc cagattgcgc tggagcatcg cgaacgtttc
     2641 cggatgcggc tcataggcgg tgatgctgct gcccggccag cgggcgctcg cccagattga
     2701 aaaggcgccg atgttggcgc cgatgtccgc gacggtcagc cgttcgccgc acaggccgca
     2761 atcatattcg ccggcaagga cctcctgggt cggtatcgcc atttgctgcg ggacttcgag
     2821 cgtgaccggc acgctcatcc ggaacaccgt ggtcacggtt gctccaccgg agccggcgtg
     2881 agcgcgttgc gcattttgat gacggcggtg gccggataat gtttcggcaa gccgatctcg
     2941 aggctgttct cggtacagga tgcgcacagc ggagtggcga ccttgcgggt cgtgaactcg
     3001 cgccgcagcg cccggatcgg ctcgtcgttc cagatctttt tcagagtgtc tttgcgcagg
     3061 tcgccaagga ccacggcttc gttgacgtcg cggcagcagg gtacgacttt gccctgccag
     3121 gtgacgctga cgctgtgcca cgggtaggcg caggggaatt ccgcgagata gtggcgccgc
     3181 gccagctcgt ccgcctggtc ggaatcgaac tgcgccaggt catcagcgat ggtgttgatc
     3241 gcatcggtgc cgccgctgaa cgtcgaaaaa tagtcgagat aggcgccgtc gatccccggg
     3301 atgtcgttcc aatagttgcg gaacagctcc cactggtgct ggttgcgctt ctggcggatc
     3361 atctggacga tgatcttggg cttcgaaagc ccgcggtcgg ccttgcgcct cgccaattcc
     3421 ttgaggttct tttcaccgcg cacaaagctc gcggccggtc cgcggatcgc catcgaggtt
     3481 tcgtcgtcca tgccgtcgac catcacgcag aggtggtcga gctggctttc gaggatttcc
     3541 tcgatccgcc gttcagtcca gaccgatgga ttggtcgaga tatagacatt gaagccgcgc
     3601 cgatggcagt gttcgaccga ttccttgaaa tgcgggtaaa ccatcggctc gccgaagtgc
     3661 agtagctgca tcgtcggcgt gtcgcggacg gtgttcttct gccatccggg ctcgacctga
     3721 tcgacgatgt cccggaacag gccgatgtcc atgtggccga gcgaacgcgt catctcgtac
     3781 gttcggggac acatcacgca tttgtaagga cagtgattgg tcgtctcgag gttgtagatc
     3841 ctgggcggtc cgaggttctt ctccagtccg tgcgcatagc tgaactcgcg aagcagcgac
     3901 gcactcagga actcgcgcgc atcggcggac cgtgcgaggg cgatcgcgtc gagcgcgcga
     3961 cgggccgcgg tacgccacat tggcaactgg agaactcctg cgtttccggc acgataccgc
     4021 gctcacgcgg aatggcgcaa gcggcgaggc cgggcgctgg cttggcagtc gatggtcgcc
     4081 gcgcgcggcg acggaggctc aggcttccca gcgctcccgc gctgcggccc tcgcttcgag
     4141 caggtcgaac aggccgcggt tctgaagcag catctgctcg ccgccgaagc gcagcgcgcg
     4201 ttcgctagcc tgggtgtcac attcccccgc gaccgcggcg aggatcgatg cttcgtcggg
     4261 gagcgacggg gcgggcgcgt cgattccgct ccgcgccgct gcgcgatcga ggagacggcg
     4321 gatcggccac cagtctgaaa cgagtgcggt ggctgcgccg agggcacagc cgcgccgttc
     4381 cgacttcgcc aggacttcca aagcgtggcg ttgggcaatc agcgtggcct gcgtctcggc
     4441 agcacccgga gtgcttggga tcgggccaac cgcggtcgtc agccggacaa gatatagccg
     4501 ctccctcgcg aagccgtcgg cggcccggtc aagccagtcc ttggcggcgc cttcgggcgc
     4561 aatctccagc gcctgctcga tcagtcccgg atggtggcca tggatgctgc acagaaggtg
     4621 gaccgcgtcg gcaaggtcgc gcggtgcgtg cggtccggaa gcctcgacaa gcgagcacag
     4681 gtacgggtga cgcgcgccgc cgtcctcggc aacgcgtacg agatgggctt ctccagcgct
     4741 gaccgccttg cggtcgacga accggttgat cgccattcgc gtccttccct ccgtccagcc
     4801 gtgaggacgg ctctacgggg aggggcgtaa cgcaagggcg taaagacgag gtttatggcg
     4861 ggttagggag ttggtgacgg tcgtcggccg cactgttggc gaacctccga ctcgcgggtt
     4921 tcgagggggg gcggagtttt ccacaggcct atccaccgct tggtgcacag atatttgcgc
     4981 cggccgtttg atttcccatc gactcggcgg cgaatcgcgc tatggttgtt tcgtgcttcg
     5041 gaccttcggg tctgaagtat gggaaccccg ccgggtcaaa ccggcggggt ttaccgcatc
     5101 tggggtccgg ggttcttgcc ggtccgcccg attggccgct gttcaggtgg tcgcgcgcat
     5161 caggccgcga gcagctcttc tttttccgat tcctgcacga ccgaggccgt ttccggagcc
     5221 gcggcaacgg ccgttacgga ctgagtcgcg gtgcgggcgg ggaagaacca gcgggtcgcg
     5281 gcgacgacca ggccgaggcc caggtaggcg atgacgacga cttcggggtt ccacagcagc
     5341 agggccgcga acgtgatccg cagccaggtg gggttgacgc cgaggtcctg gccgaccgct
     5401 tcgcaaacgc cgagcaaggt atcgccgcgc agcggaagcg cagtcggctt gtcctcgcgg
     5461 ccggtgtccc ggttgttgct gaaatccgtg gtggcggtcg tcatcgaaaa gctcctgctg
     5521 ggttaccccg gtatcaaagc aagcgccgtg ccaaaatcgg gaaagcccgc gcttgcaagc
     5581 acttggcgcg accccccagt cgccggttgg ggaaatgcgc cgagtcctcg acccgacaat
     5641 tgggaattca caccttatgc tgcaagtgcg atattgcatt gcagcacttg attcgtggac
     5701 cagaacgaca aatgtgttac gggaacgccc gattggaagg agctgcccag tgatccgggt
     5761 gatgctgaaa tcgaagatcc accgagcgac ggtgacccag gccgacctcg actatgtcgg
     5821 gtcgatcgcc atcgaccgcg cgctgatgga cgccgccgac ctcatcgagg gcgagcaggt
     5881 cgtgatcgcc gacatcacca acggcgcccg gctggaaacc tacgtcatcc cggcgccggc
     5941 gggcagcggg acggtcggga tcaacggcgc cgcagcgcac ctggtcgcgc agggcgatct
     6001 cgtcatcatc atgagctacg cgatgctcga ggaggcggag gcgcgcaggt cgaagccacg
     6061 ggtcgtccat gtcgacgaac gcaaccggat cgtcgcccgg ggcgaggacc ccgcggagcc
     6121 ggtccccggc gccgccggcc agaagcgggc agtcaacgcc gccgcttaag ccgtctcgaa
     6181 gacggtgttg aacagcgagg caagctcgcc aagcgggatc tcgcgataga attccaggcc
     6241 cgcggaattg ccgtcgaccc acaccacccg ggcggcgatg aacagatcgc cgcgcttgag
     6301 gatcacgtcc gagccgtgct cgatcgggac ttggcaggcg atcccggcgc cggtgctggt
     6361 gaggtcgcgg acccgcgcct gctgcgcgcc ggccgaggtg atcagggtcg tgcgcatcag
     6421 cacgcgcctc cggctcgccc gcctgagatc ctgaacctgg accgtcacct cgcctccctt
     6481 gcttcgcggc tccccggcat aaaagccggg cgcggccgga tgtttcggca gcggcctcgg
     6541 tgcgccatgt tgggacagga cagaaaaaag acccggcgcg tggggtcgcc gggccttcct
     6601 gttctggcag tgccgttgat gttccacgaa cccgccggga agcgcaattt gtcgaaagtt
     6661 aacgggcgtc gccggggtgc ggcgatcctg tggataagtt tgccgttgaa ggtggatgtg
     6721 gaacgaccgc catgctcgcc agtcccgcgg actgcctcct ggcgacgata gtggcgacgc
     6781 cgccggagct cgctaaaggt ctaacgacgc cgccgttcac ccgtttgcgc ccgacctggt
     6841 taggggagcg tgaccggtca tggttaccgc gccgccgctg cgggtaaatg cctagccgcc
     6901 gccagggtgt tggacatccg aggttgtcgc aagtcccgac aattcttcgg cttcgagcgt
     6961 cgccacgaga cgctctcctt tccagatttc gcacttgagc gcgtcaaggt tcttgtcatg
     7021 cgcctggcaa atcgcgtccc ggtcgtcggt tgcgctgatc cattccgcca ggctgatcct
     7081 gccgacgccg tccagacaat agagccgata agcggccatt gcaccgcccc cgcggtgcgc
     7141 cggtcatacg ccttttccac aggcaaggcg atggccgagt ttcgggccag ggactgtgtc
     7201 ccgggacctt cgaagcgctt gtcgtcggta tttttttccg ccatttacgc aatgggttag
     7261 gcgtggggtg agcaagtgaa gcactatcgg gtcaacaagc tcgcgaagcc gggcggggtc
     7321 gtggtcaaga aaaaggacat cctcgccacc gacgaccgcg aggcggtcag gcacgccgag
     7381 gatagcgacg actgccccgt ctgcgacgtc ctcaagaacg gcgagacgat cgcccgcatt
     7441 cattagccga gcgcgcaggc cccggcgcgg cggagtaccg ccgcccgggg cccgctgccc
     7501 gctcagctcg tgacgcgttc gaccgtggcg gtctttccgt cggggccggt tgacgtccag
     7561 acgccgtttg cgtcgaccgt ttcggtgttg cacgtctcgg tcgcgccttc cttgtcctcg
     7621 gtatagcaat attgttcgg
//
LOCUS       DATAKH010000098        15193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2067,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000098 DATAKH010000000
VERSION     DATAKH010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 15193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15193
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2067"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VHN55_03915"
     CDS             complement(<1..472)
                     /locus_tag="VHN55_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010164690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HEX2803111.1"
                     /translation="MPTFARELEETLHNALGEASRRRHEYATLEHLLIALIDDEHASK
                     VMTSCGVNRDELRTGVKHYLDNELGALVADTSTDPTPTSGFQRVVQRAILHVQSSGRD
                     EVTGANVLVALFSERESYAVFFLQQHDMSRLDAVSFISHGVGKGTASPSEVSTPK"
     gene            complement(624..869)
                     /locus_tag="VHN55_03920"
     CDS             complement(624..869)
                     /locus_tag="VHN55_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1192 domain-containing protein"
                     /protein_id="HEX2803112.1"
                     /translation="MRLIDFVPPRVNDLPMDLDELFPDKPGDPVAELKKQDLDPLSID
                     ELEERIEALKEEISRIEAHIQRAQSHRSAADELFKKP"
     gene            898..1878
                     /locus_tag="VHN55_03925"
     CDS             898..1878
                     /locus_tag="VHN55_03925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HEX2803113.1"
                     /translation="MKAVVAPQPDGAEELALIERPVPRPGKGEVLVRVAAAGVNRPDV
                     LQRRGLYPPPPGAPDILGLEIAGEVVEAGEGAEKLVGKTVCALVAGGGYAEYCTAPAA
                     TCLPVPTSLSVVEAAAVPETLFTVWSNLFGRGSAVEGDTVLVHGGTSGIGTMAIALGK
                     LFGLTVIVTCGTDAKCRRAEELGADSAINYRSRDFVEAVKELTQGQGVKVVLDMVGGD
                     YVPRNLACLADDGCHVSIAFQRGARTEIEIAEVMRRRLTLTGSTLRPRSLEFKASLAD
                     EIARTVWPHVEGGRLKPVVDSTFPLAEAGKAHARMEAGEHVGKIVLEVSP"
     gene            1973..2671
                     /locus_tag="VHN55_03930"
     CDS             1973..2671
                     /locus_tag="VHN55_03930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010217872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1013 domain-containing protein"
                     /protein_id="HEX2803114.1"
                     /translation="MAQPLMPHATASWLVENTSLTFEQIAEFCGLHLLEVQAIADDTA
                     ATKLTGRDPVRAGELTHEEIEKGQKDSEYSLQMHRQPDQVRRTKGPRYTPLSKRQDKP
                     DGIAWLVRNHPELSDGQIGKLIGTTRTTISAIRERSHWNIANITPKDPVTLGLTTQRE
                     LDAAVAKAQKAAGTAAPKDEHFEEDRQALIEELRAEREQNARDAEAALEAAEAGETAP
                     ADEIVPGIRDPFKR"
     gene            2710..2964
                     /locus_tag="VHN55_03935"
     CDS             2710..2964
                     /locus_tag="VHN55_03935"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020372200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEX2803115.1"
                     /translation="MPEHASDQASGELSFEAALARLEEIVRTLEKGEAPLDKSIELYQ
                     EGDKLKRHCEARLKSAQARIEQIAFGSDGKPAGAKPFDVG"
     gene            2954..3868
                     /locus_tag="VHN55_03940"
     CDS             2954..3868
                     /locus_tag="VHN55_03940"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HEX2803116.1"
                     /translation="MSVELVDGPRLDLEAEADRISTRVDDFFVRLLTAPGDSRDRLYA
                     AMRHAAVGGGKRLRPLLTIAASRLFGIDDEKALRVAAAIEAIHVYSLIHDDLPAMDDD
                     DLRRGKPTVHKAFDEATAVLAGDSLHALAFEILAHEATDRDPLVRSELVLELSRASGP
                     NGMAGGQMMDLAAEGQSLDLADVTRLQQLKTGALIEYAVEAPCILMRLARDARTPYRG
                     YARNIGLAFQITDDLIDHSGSESTAGKRTGKDAKAGKATMVSLLGPERAAQQARVLVE
                     QGIDHLSDHGEEADMLRAIARFAIERDR"
     gene            3871..4377
                     /gene="coaD"
                     /locus_tag="VHN55_03945"
     CDS             3871..4377
                     /gene="coaD"
                     /locus_tag="VHN55_03945"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010162878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEX2803117.1"
                     /translation="MADRIGVYPGTFDPITLGHLDIIRRATHLVDRLVIGVTTNPSKE
                     PLFTVEERLEMVRRETVGIAGKVEVVDFDSLLMDFAEREGASMIIRGLRAVGDFEYEF
                     QMAGMNQQLNNKIETAFLMADVSLQPIASRLVKEIARYGGSIDKFVTPAVAADVARQL
                     GQSQEKSQ"
     gene            4374..5006
                     /locus_tag="VHN55_03950"
     CDS             4374..5006
                     /locus_tag="VHN55_03950"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008830309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX2803118.1"
                     /translation="MKSLALPLLAFTLAGAAPETTPEKQIAMNPPVEVVADPANRLTL
                     ILSNGGTVVIQMRPDAAPMHVQRIQTLVRQGFYDGTIFHRVIPGFMAQGGDPLGTGQG
                     GSKLPDLEAEFNSLPHFRGTVAAARAQDPNSANSQFYIMFAPKASLDGNYTVFGRVVS
                     GMEAVDAIATGEPPAEPTKIVHAHLGDVTVPPVAGQAPTEAPAMEGAPAG"
     gene            5012..6046
                     /gene="queA"
                     /locus_tag="VHN55_03955"
     CDS             5012..6046
                     /gene="queA"
                     /locus_tag="VHN55_03955"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEX2803119.1"
                     /translation="MRVDLFDFDLPPDRIALRPARPRDSAKLLLVEGERVSDRQVLDL
                     PDLLRPGDVLLFNDTKVIPAQLEGLRGEARVGVTLHKRESARSWWAFVRNAKRLRPGD
                     RIDFGREVAALVSERAEDGSFLIHFEGDEPVELLLGRAGRMPIPPYIASKRPADERDH
                     EDYQTVFAREEGAVAAPTAALHFTDRLMDAIDRRGVLRETLTLHVGAGTFLPVKSDDT
                     TGHRMHSEWGRIDAATAERLNAARAAGGRLIAVGTTSLRLVESAADDSGTIHAFEGDT
                     AIFITPGYRFRAVDGLMTNFHLPRSTLFMLVSALMGLEVMKAAYAHAVAGGYRFYSYG
                     DASLLLPAQS"
     gene            6189..7496
                     /locus_tag="VHN55_03960"
     CDS             6189..7496
                     /locus_tag="VHN55_03960"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2803120.1"
                     /translation="MPAKFGIAAFAAFSWVMLSIILSRPWMAELGAVTHPLFALFAIT
                     FIAYVPGFMNTFLVVSLLLDRRPLRRQPAAYPPITVLIAAYQEETAIADTLRSVAGNG
                     YSGPLEVLVLNDGSTDSTAERVRDEIERLDLAANAEVRLIDFAANRGKAAALNSGLEL
                     ASYELIVTVDGDSRLQPGALTGIVERLLSDPPNTQAVAGAILVRNSRENIITGAQEWD
                     YFHGIAAVKRMQSLYQGTLVAQGAFSIYRRDALKAVGGWQDVIGEDIVLSWAMLDKGY
                     RIGYAEDAIAWTNAPNTFRQFARQRQRWSRGLIEALNQHEGLLFRRRLTQMFIWWNLL
                     FLPVDATYTFIFIPGVIAAVFFHLYWVAGLMTLAVIPIAILWNAVIFKVQAKMFRGQG
                     LKVRHNPRGLVFYLACYALMMQPICVWGYAVEALGLRKKWGTK"
     gene            7493..8365
                     /locus_tag="VHN55_03965"
     CDS             7493..8365
                     /locus_tag="VHN55_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803121.1"
                     /translation="MSAFLVAAALGASSPAVGADVFYSSDAEDTEVFKAGMNFDLRYD
                     GPDRRLGVRFERARFTPLGQGSRTMGRVYVRAADSLGKWTWNAAVGTDGHTVLGSAGI
                     HDESRFRKELFVERDILETPQGLSRGIYYTFLGAALDLPADDRNVVTLVAGIQPFTGS
                     NIRTHLRATYVHVVKPDWGLSAQVRTRYFHSSRPGEFDYYSPRWYAEVLPVVQVRRFV
                     GGWQLLGAAGYGAQRDSESNWRSSRYIHAGVTSPRFQKTWALTGSFTYTNTPVGTGFT
                     YRYLQFNIGLTKAF"
     gene            8410..9513
                     /gene="tgt"
                     /locus_tag="VHN55_03970"
     CDS             8410..9513
                     /gene="tgt"
                     /locus_tag="VHN55_03970"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019517380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEX2803122.1"
                     /translation="MASLTFTIHATDGAARTGAIAMHRGEIRTPAFMPVGTAATVKAM
                     KPADVRASGADIILGNTYHLMLRPGAERIAKLGGLHAFMGWDRPILTDSGGYQVMSLS
                     ELTKVTEEGVAFASHLDGSRHMLSPERSIEVQRLLGSDIAMAFDQLVPATATSDGQAA
                     AMERSMRWAERSKAAFSGEGALFGIQQGGLDEELRGRSAEALTAIGFDGYAIGGLAVG
                     EGQEAMCRVLDFAAPMLPADKPRYLMGVGKPDDLVEAVLRGVDMFDCVLPTRSGRTGQ
                     AFTADGPLNIRNARFAEDRDPIEPGCPCPTCKQFERAYVHHLVRSGEILGAMLMTEHN
                     LWFYQRLMQAMRDAIAEARLGDLAGDFLKRYRR"
     gene            complement(9514..10365)
                     /gene="yghU"
                     /locus_tag="VHN55_03975"
     CDS             complement(9514..10365)
                     /gene="yghU"
                     /locus_tag="VHN55_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010217697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HEX2803123.1"
                     /translation="MTDYVPPKVWSWDEPSGGKFANINRPVAGPTQDRALPVGKHPLQ
                     LYSLATPNGQKVTIMLEELLERGHGGAEYDAWRIDIEKGDQFSSGFVAINPNSKIPAL
                     VDRSGSEPVRVFESGAILIHLAEKFGEFLPPSGPARAETLSWLMWQMGAGPFLGGGFG
                     HFFAYAPEKFEYPINRYSMEAKRQFDLLNRRLAESEYVAGDNYTIADIAAWPWYGGIA
                     LGRSYEGAAEFLATHEYEHVMRWAKQVDKRPAVKRGRIVNKSEGGLRERHSASDFEAI
                     AQAQPAE"
     gene            complement(10447..11790)
                     /locus_tag="VHN55_03980"
     CDS             complement(10447..11790)
                     /locus_tag="VHN55_03980"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX2803124.1"
                     /translation="MTFADLGLSDQLLRAVADSGYSEPTPIQRGAIPAVLMGKDLIGI
                     AQTGTGKTAGFVLPMLDILHHGRSRALMPRSLILEPTRELAAQVSENFETYGKYHKLS
                     MALLIGGVQMGDQVKALEKGVDVLIATPGRLLDLFKRGKILMNGCELLVIDEADRMLD
                     MGFIPDIEEICSKLPANRQTLLFSATMPPPIQKLASRFLKDPKKVEVARPATANVNID
                     QRIVEVKPTDKRDVLRKLLREEGVRNAIIFCNRKTTVRELTTSLKRARFAAGQIQGDM
                     DQSDRIAELDRFKKDEINILVASDVAARGLDVKGVSHVFNYDVPWQPDDYIHRIGRTG
                     RAGATGIAITLATRADSDQVAAIEKMLGNKIPKLGEKAIEPRAKGEPEPKRSEARQPE
                     KAEHKPKERDKPERKPRPPERKPSAAEPKEQAKQAAEDDSEWNGPLPDFLKVSAS"
     gene            complement(11893..12318)
                     /locus_tag="VHN55_03985"
     CDS             complement(11893..12318)
                     /locus_tag="VHN55_03985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019832840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803125.1"
                     /translation="MGLSVTLLGALTLIPMLFGFAGGSGVQVRSIVVEDQIIIRVPVR
                     PTPRVEWSERKGPDCIPIRAIQGAFLSASDHVDFVLPGRRLIRAELDENCPALDFYDG
                     FYLRSADDRVCAKRDSIRVRMGAPCRIERFRELKAKVRR"
     gene            12892..13689
                     /locus_tag="VHN55_03990"
     CDS             12892..13689
                     /locus_tag="VHN55_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SapC family protein"
                     /protein_id="HEX2803126.1"
                     /translation="MATEAPTQQQLPLLYTALEPLNSKAHAKMKIRPVDKAPGIATTH
                     AVPATVDEFPLLARHYPIIFAVGENPVPLALMGLSEGVNAFMDENGRTTEGNLYIPAY
                     LRRYPFLLARLRPDSDELSLCFDPTAGAIGEFKEGEPLFEENGDASKATKAVLEFCEQ
                     FETAGQRTSAFLEDLKKSGLLMDGEVAIQPEGADKPFIYRGFQMVDEEKLRDLPGDKL
                     RKFNQSGLLPLIYAHLFSLSQIREVFARQVAQGKGPAPVKQAETAEA"
     gene            complement(13866..14699)
                     /locus_tag="VHN55_03995"
     CDS             complement(13866..14699)
                     /locus_tag="VHN55_03995"
                     /inference="COORDINATES: protein motif:HMM:NF016873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEX2803127.1"
                     /translation="MTPLSPPLIHPARGPLPVLLSIPHSGRDYPDWLLRLSKHGSKSL
                     QPLEDPLVDRLAWRALGQGIAAVVAQAPRAAVDCNRAEDEVDPAAIHLPHRTRPSPRA
                     RGGLGIVPSRTAAHGHLWRHPISRDELERRLDEAYRPYHRAIEQQLALLVDRFGCALL
                     LDCHSMPPSQGSAQVVFGDRFGRSAAPWLLSGALSIAGKAGFSAAANDPFAGGHIAER
                     HGSPQDGVHALQIEIDRRCYLTAGGEPGGRFDEIAAMIESLAVSLGTELLERRLPAAA
                     E"
     gene            14801..15178
                     /locus_tag="VHN55_04000"
     CDS             14801..15178
                     /locus_tag="VHN55_04000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2803128.1"
                     /translation="MARILLAEDDTSMREFLQRALQRVGYEVDSVGCGTEAIPLLEAD
                     RYDLLLTDIVMPEMDGIELAQKASAMDPDIRVMFITGFAAVALQSGRAAPEAKMLSKP
                     FHLKDLVAEVDRIFQTEDQHGRL"
BASE COUNT         2575 a         5041 c         4988 g         2589 t
ORIGIN      
        1 ccttgggggt cgagacttcg cttgggctcg cggttccctt gccgacgccg tgcgagatga
       61 agctgaccgc gtcgaggcgg ctcatgtcat gctgctggag gaaaaagacg gcgtagcttt
      121 cgcgctcgga gaagagggcg acgagcacgt tggcgccggt gacctcgtcg cggccggacg
      181 actggacatg gaggatcgct cgctggacca cccgctggaa gccgctcgtc ggggtcgggt
      241 cggtgctggt gtcggcgacc agggctccga gctcgttgtc gagataatgc ttcaccccgg
      301 tgcgaagctc gtcgcggttc actccgcagg acgtcatcac cttcgacgca tgttcgtcat
      361 cgatcagcgc gatcagaagg tgctcgaggg tcgcatactc gtgcctgcgg cggctggctt
      421 cgccgagcgc gttgtgcagg gtctcttcga gttcgcgagc aaacgtaggc atttaggttg
      481 gtactcccac cgctcccggg gtgagcccgg ggctctcgat gtccaatgtc atatgcgcgg
      541 aacgtgcaat caaggcccgc gtgcccgctt atccccagtt tataggaggg aattgatgtg
      601 catcgggtga acaaagacgg gagctagggc ttcttgaaca gttcgtccgc cgccgagcgg
      661 tgcgactgtg cacgctgaat gtgcgcctcg attcgcgaga tttcctcttt cagcgcctcg
      721 atccgttcct caagctcgtc gatcgacagc gggtcgaggt cctgcttctt gagctcggcg
      781 accgggtcgc cgggcttgtc cggaaagagc tcgtcgaggt ccatcggcaa atcgttgacc
      841 cgagggggta cgaagtcaat aagccgcatc gccgtgagca gctctatccc agcgacaatg
      901 aaggcggtcg tcgcgccgca acctgatggc gccgaggagc tggcgctgat cgagcggccg
      961 gtgcccaggc ccgggaaggg cgaggtgctg gtcagggtcg cggcggcggg cgtgaaccgg
     1021 cccgacgtcc tccagcggcg cgggctttat cccccgccgc ctggagcgcc cgacatcctc
     1081 ggcctcgaaa ttgccggcga agtggtcgag gcgggggagg gggcggagaa gcttgtcggc
     1141 aagaccgtct gcgcgctcgt cgccggaggc ggttatgccg aatattgcac cgccccggcg
     1201 gcaacgtgcc tgcccgtgcc gacgagcctg tcggtagtcg aggcggcggc agtgccggaa
     1261 acgcttttca ccgtctggtc caacctgttc gggcgcggct ccgccgtcga gggcgacacc
     1321 gtgctggtcc acggcgggac cagcggcatc gggaccatgg cgatcgcgct cggcaagctg
     1381 ttcgggctca ccgtcatcgt cacctgcggc accgacgcca agtgccggcg ggcagaggaa
     1441 ctgggggcag acagcgcgat caactaccga agccgggatt tcgtggaggc agtcaaggag
     1501 ctgactcagg ggcagggagt gaaggtcgtg ctcgacatgg tcggcggcga ctatgtgccg
     1561 cgcaacctcg cctgcctcgc cgacgacggc tgccacgttt ccatcgcgtt ccagcgcgga
     1621 gccaggacgg aaatcgagat tgccgaggta atgcggcggc ggctgaccct gaccggatcg
     1681 acccttcggc cgcgctctct cgagttcaag gccagcctcg ccgacgagat agcgaggact
     1741 gtctggcccc atgtcgaagg cggccggctc aagccggttg tcgattccac cttcccgctc
     1801 gccgaggccg gcaaggccca cgcgcggatg gaggcgggag agcatgtcgg caagattgtg
     1861 ctcgaagtct cgccatgacc ttgccgaccg ggcgctgcgg gagtaagtcg ggggcgaccg
     1921 gccgctccgc aaggggcggc cctattcatt tcggaattcc tggagaatgc cagtggccca
     1981 gcccctgatg ccccatgcga ccgcctcctg gctggtcgag aacacgtcct tgaccttcga
     2041 gcagatcgcc gaattctgcg gccttcacct gctcgaggtc caggcgatcg ccgacgacac
     2101 ggcggcgacc aagctgaccg ggcgcgatcc cgtccgcgcg ggcgagctca cgcatgagga
     2161 gatcgagaag ggccagaagg actcggagta cagcctgcag atgcaccggc agcccgacca
     2221 ggtccggcgg accaagggcc cgcgctacac cccgctgtcg aagcggcagg acaagccgga
     2281 cgggatcgcc tggctggtac gcaaccaccc cgagctcagc gatggccaga tcggcaaact
     2341 catcgggacg actcggacga cgatttcggc gatccgcgag cgcagccact ggaacattgc
     2401 caacatcact ccgaaggacc cggttacgct aggcctgacc acccagcgcg agctcgacgc
     2461 cgcggtcgcc aaggcgcaga aggcggcagg caccgctgct cccaaggacg agcatttcga
     2521 ggaggaccgg caggcgctga tcgaggagct tcgggccgag cgcgagcaga atgcgcgcga
     2581 tgccgaagcg gcgctcgagg cggccgaagc cggcgaaacc gctccggcgg acgagatcgt
     2641 tccgggcatc cgcgacccgt tcaagcgttg atttgcggct gttagaggct catcctgacg
     2701 ccgatggaca tgcccgaaca cgcatccgac caggcttcag gagagcttag cttcgaggcc
     2761 gctctggcgc ggctcgagga aatcgtccgg acgctcgaaa agggcgaggc gccgctcgac
     2821 aagtcgatcg agctctacca ggaaggcgac aagctgaagc ggcattgcga agcccggctc
     2881 aagtcggcgc aggcgcggat cgagcagatc gccttcggaa gcgacggaaa gccggcgggg
     2941 gccaagccct tcgatgtcgg ttgagctcgt cgacggccca aggctcgacc tcgaagccga
     3001 agccgaccgg atttccaccc gggtcgacga tttctttgtc cgcctgctga ctgcgcccgg
     3061 cgacagccgc gaccggctct atgcggcgat gcgccatgcc gccgtcggcg gcggcaagag
     3121 gctccgcccg cttctgacga tcgccgcttc gaggctgttc gggatcgacg atgagaaggc
     3181 gcttcgggtc gccgctgcaa tcgaggcgat ccacgtctat tcgctgatcc acgacgacct
     3241 tccggcgatg gacgacgacg accttcgccg cggcaagccg acggtccaca aggcattcga
     3301 cgaagccact gccgtgctcg ccggcgacag cctccatgcc ctcgcattcg aaatcctcgc
     3361 ccacgaggcg accgaccgcg atcccttggt gcgctccgag ctggtgctgg agctgtcgcg
     3421 cgcatccggc ccaaacggaa tggccggcgg gcagatgatg gaccttgccg ccgagggcca
     3481 gtcgctcgac ctcgccgacg tcacccggct ccagcagctc aagaccggcg cgctgatcga
     3541 atatgcggtc gaggcgcctt gcatcctcat gcgcctcgcg cgcgatgccc ggacaccgta
     3601 ccggggctat gcgcgcaaca ttggcctcgc cttccagatc accgacgacc ttatcgacca
     3661 cagcggcagc gaatccacgg ctggcaagcg caccggcaag gacgccaagg ccggcaaggc
     3721 gacgatggta tcgctcctcg ggcccgagcg cgcggcccag caggcgcggg tgcttgtcga
     3781 gcagggcatt gaccatctct ccgaccatgg cgaagaggcc gacatgctgc gcgcaatcgc
     3841 gcgcttcgca atcgagcggg accggtaatc atggctgaca ggattggagt ctatccgggt
     3901 acgttcgacc cgatcacgct cgggcatctc gacatcatcc gccgggcgac ccatctcgtc
     3961 gaccgcctgg tcatcggggt gacgacgaac ccgtccaagg agccgctgtt cacggtcgag
     4021 gaacggctgg agatggtccg ccgcgagacg gtcgggatag ccggcaaggt cgaggtcgtc
     4081 gatttcgatt cgctgctgat ggacttcgcc gagcgcgaag gggcgtcgat gatcatccgc
     4141 ggcctgcgcg ccgtcggcga cttcgaatat gagttccaga tggccggaat gaaccagcag
     4201 ctcaacaaca agatcgagac tgccttcctg atggccgacg tctcgctcca gccgatcgcg
     4261 tcacggctgg ttaaggagat tgcccgctat ggcggctcga tcgacaagtt cgtaacccca
     4321 gcggtcgccg ccgacgtcgc ccgtcagctc ggccaaagcc aagagaaatc gcaatgaaat
     4381 cgctcgcact ccctctgctc gccttcaccc tcgccggtgc ggcgccggaa accacgccgg
     4441 agaagcagat cgccatgaat cccccggtcg aagttgtcgc agaccctgcc aaccggctga
     4501 ccctgatcct gtcgaacggc ggaacggtcg ttatccagat gcgtcccgac gccgcgccga
     4561 tgcacgtcca gcgcatccag acgctcgtcc gccagggctt ttacgacggc accatctttc
     4621 accgggttat ccccggcttc atggcccagg gcggtgatcc tctggggacc ggccagggcg
     4681 ggtccaagct tcccgacctg gaggcggagt tcaattcgct gccccatttc cgcggaaccg
     4741 tcgccgctgc gcgcgcacaa gacccgaaca gcgccaacag ccagttctat atcatgttcg
     4801 cgcccaaggc gtcgctcgac ggcaactaca ccgtcttcgg ccgggtcgtc tccggcatgg
     4861 aagccgtcga cgcgatcgcc acgggcgagc ccccggccga gccgacgaag atcgtccacg
     4921 cccatttggg tgacgtgacc gtcccgccgg tcgccggcca ggcgccaacc gaggcgcccg
     4981 caatggaagg cgctccggcc ggctagggaa agtgcgagtc gacctttttg atttcgacct
     5041 gccgcccgac cgcattgcac tgagaccggc gcgcccgcgc gattcggcga aactgcttct
     5101 ggtcgagggc gagcgggtgt cagaccggca ggtcctcgac ctgccggacc tgcttcggcc
     5161 cggcgacgtg ctgctgttca acgatacgaa ggtaattccg gcgcagctgg agggactgcg
     5221 cggcgaggcg cgggtcgggg tgacccttca caagcgcgaa tctgcgcgca gctggtgggc
     5281 gttcgtccga aacgcgaagc ggctgcgccc gggcgaccgc atcgacttcg gccgcgaagt
     5341 cgcggctttg gtcagcgagc gcgccgagga cgggagtttt ctaatccatt tcgaaggcga
     5401 cgaaccggtc gagctattgc tggggcgggc cgggcgaatg ccgattccac cttatatcgc
     5461 gtcgaaacgg cccgccgacg aacgtgacca tgaagactac cagaccgtct tcgcgcgcga
     5521 ggaaggcgcc gtcgccgccc cgaccgcggc gctccatttc accgaccggt tgatggacgc
     5581 gatcgaccgt cgcggcgtgc tccgagaaac gctgaccctc catgtcggcg cggggacgtt
     5641 cctgccggtc aagtcggacg acacgaccgg ccaccggatg cattccgaat ggggacggat
     5701 cgacgcagcc accgccgagc ggctcaacgc cgctcgagcc gcaggtgggc ggctgatcgc
     5761 ggtgggcaca acgtcgcttc gcctcgtcga gagcgctgcc gacgacagcg ggaccatcca
     5821 cgcgttcgag ggcgacaccg cgatcttcat cactccgggc taccgcttca gggcagtgga
     5881 cgggctgatg accaacttcc acctcccgcg ctcgacactg ttcatgctcg tcagtgcgtt
     5941 gatggggctc gaggtgatga aggcggctta tgcgcacgcc gttgcgggtg gttaccgttt
     6001 ctacagctac ggtgacgcca gcctgcttct accggcgcaa agttaatcca ttttgatata
     6061 atcgtataac tttcatttaa ctccgccggg taactgcggc ttctccagac gagaagcgca
     6121 aggtttttcc cgacatgaca accctagtgg ccgcgcgcgc tcgcggacgg catcgatact
     6181 atattccggt gccggcgaag ttcgggatcg ccgctttcgc cgcattttcg tgggttatgc
     6241 tgagcatcat cctgtcgcgg ccgtggatgg cggagctcgg agcggtcact caccccttgt
     6301 tcgcgctctt cgcaatcacc ttcatcgcct acgtcccggg cttcatgaac accttcttgg
     6361 tggtcagcct gctgctcgac cgccgtcctt tgcggcggca gccggccgcc tatccgccga
     6421 tcaccgtcct cattgccgcc taccaggagg aaacggcgat cgccgatacg ctgaggagcg
     6481 tcgccggcaa cggttattcg ggcccgctcg aggtcctggt cctcaatgac ggctcgacgg
     6541 attcgacggc agagcgagtt cgcgacgaaa tcgagcgcct cgacctggcg gccaatgccg
     6601 aggtccggct gatcgatttt gccgccaatc gcggcaaggc ggccgcgctg aactccggtc
     6661 tggagctggc cagctacgag ctgatcgtca ccgtcgacgg cgattcgcgc ctccaaccgg
     6721 gcgctctcac cggaatcgtc gagcgcctcc tgtcggaccc gcccaacacg caggcagttg
     6781 ccggcgccat cctcgtccgc aattcgcgcg agaacatcat caccggcgcg caggaatggg
     6841 attatttcca cggcatcgcc gcggttaagc ggatgcagag cctctaccag ggcacgctcg
     6901 tcgcccaggg cgccttctcg atctaccggc gcgacgcgct gaaggccgtg ggcggctggc
     6961 aggacgtaat cggcgaggac atcgtgctta gctgggcgat gctcgataag ggctatcgaa
     7021 tcggctacgc cgaggacgcg attgcctgga ccaacgcgcc caacaccttc cgccagttcg
     7081 cccgccagcg gcagcgctgg tcgcgcggac tcatcgaagc cctgaaccag cacgaagggc
     7141 tgctgttcag gcggcggctg acccagatgt tcatctggtg gaacctgctg ttcctgccgg
     7201 tcgacgccac ctacacgttc atcttcatcc ccggcgtcat cgccgcggtc ttcttccacc
     7261 tctactgggt cgccgggctg atgacgctcg ccgtcatccc gatcgcgatc ctgtggaatg
     7321 cggtcatctt caaggttcag gcgaagatgt tcaggggcca ggggctgaag gtccggcaca
     7381 atccgcgcgg gctcgtcttc tacctcgcct gttacgcgct gatgatgcag ccgatctgcg
     7441 tctggggcta tgcggtcgag gcgctcggcc tccgcaagaa atggggcacg aaatgagcgc
     7501 gtttctcgtc gcggccgcgc tcggcgcctc ttcgccggcg gtcggagccg acgtcttcta
     7561 ttcgtcggac gccgaggaca ccgaagtgtt caaggccggc atgaatttcg acctgcgtta
     7621 cgacgggccc gaccggcgcc tgggagttcg cttcgagcgc gcccgattca ctccgctcgg
     7681 gcagggatcg cggacgatgg gccgcgtcta cgtccgcgcc gccgactcgc tcggcaaatg
     7741 gacgtggaac gcggcggtgg gcaccgacgg ccacaccgtt ctcggttcgg cgggaatcca
     7801 cgacgaatcc cgcttccgca aggagctgtt cgtcgagcgc gacatccttg aaacgccgca
     7861 ggggctgagc cgcggaatct attacacttt cctcggcgcc gcgctcgacc ttccggccga
     7921 cgaccgcaac gtcgtcaccc tcgttgccgg aatccagccg ttcaccggca gtaacatccg
     7981 aacgcacctg cgcgcgacct acgtccacgt ggtcaagccc gattggggcc tcagcgcgca
     8041 ggtgcggacc cgctatttcc acagcagccg gccgggcgag ttcgattatt attcgccccg
     8101 ctggtacgcc gaggtgcttc ccgttgtgca ggtccgccgc ttcgtcggag gctggcagct
     8161 gctcggcgcc gccggttacg gagcgcagcg cgattccgaa agcaactggc ggagctcgcg
     8221 ctatatccac gccggggtca ctagcccccg ttttcagaag acatgggcgc tcacaggcag
     8281 cttcacctat accaacacgc ccgtcggcac cggcttcacc tatcgctacc tgcagttcaa
     8341 catcgggctg acgaaggcat tctgaccgcg attgccgcag cggcgaaagc cgcttaggcg
     8401 cgggccgcaa tggccagcct gacgttcacc atccatgcca ccgacggcgc ggcccgcacc
     8461 ggtgcgatcg ccatgcaccg cggtgagatc cggacgcccg cattcatgcc ggtcggcacc
     8521 gcggcgacgg tcaaggcgat gaagccggcg gacgtccgcg cgtcgggcgc cgacatcatt
     8581 ctcggcaaca cctaccatct gatgctccgc cccggcgccg agcgaatcgc gaagctcggc
     8641 ggcctccacg cctttatggg ctgggaccgg ccgatcctga cggacagcgg cggttaccag
     8701 gtgatgagcc tgtcggagct caccaaggtg actgaggagg gggttgcgtt cgcaagccat
     8761 ctcgacggct cgcggcacat gcttagcccg gagcgctcga tcgaggtcca gcgcctgctc
     8821 ggctccgaca tcgcgatggc cttcgaccag ctggtccccg ccaccgcgac cagcgacggg
     8881 caggcggcgg cgatggaacg ctcgatgcgt tgggcggagc ggtccaaggc cgcattctcg
     8941 ggcgagggcg cgctgttcgg gatccagcag ggcgggctcg acgaggagct tcgcggccgc
     9001 tcggccgaag cgctgacggc gatcggcttc gacggttatg cgatcggcgg gcttgccgtc
     9061 ggcgaagggc aggaggcgat gtgccgagtc ctcgatttcg cggcgccgat gcttcccgcc
     9121 gacaagcccc gttacctgat gggcgtcggc aagcccgacg acctggtcga ggcggtgctt
     9181 cgcggggtcg acatgttcga ctgcgtgctt ccgacccgct ccggccgcac cggccaggcg
     9241 ttcaccgccg acgggccgct caacatccgc aatgcccgct tcgccgagga ccgcgatccg
     9301 atcgagccgg gctgcccgtg cccgacctgc aagcagttcg agcgcgcgta cgtccaccat
     9361 ctcgtccggt cgggcgagat cctcggcgcc atgctgatga ccgagcacaa tttgtggttc
     9421 taccagcggc tgatgcaggc gatgcgcgac gccatcgccg aggcgcggct gggggatttg
     9481 gccggggact tcctgaagcg ctatcggcgc tagttactcg gccggctgcg cctgcgcgat
     9541 tgcttcgaaa tcgctggccg aatggcgctc gcgaagcccg ccttcgctct tgttgacgat
     9601 ccgtccgcgc ttcaccgcgg ggcgcttatc gacctgcttc gcccagcgca tcacatgttc
     9661 atattcgtgc gtcgccagga attcggccgc gccttcgtag ctgcggccca gtgcgatccc
     9721 gccgtaccag ggccaggccg cgatgtcggc gatcgtatag ttgtcgcccg cgacatattc
     9781 gctttccgcg aggcgtcggt tcagcaggtc gaactggcgc ttcgcctcca tcgaatagcg
     9841 gttgatcgga tattcgaact tttcgggcgc gtaggcgaag aagtggccga agccgccgcc
     9901 cagaaacggc cctgcgccca tctgccacat cagccacgac agcgtctccg cccgcgcggg
     9961 acccgaggga ggaaggaact ccccgaactt ctccgcgagg tggatgagga tggcccccga
    10021 ctcgaacacg cgcaccggct cggatccgct acggtcgacc agcgccggga ttttcgaatt
    10081 ggggttgatt gcgacgaacc cgctcgaaaa ctggtctccc ttttcgatgt cgatccgcca
    10141 ggcgtcatat tcggccccgc cgtggccgcg ctcgagaagc tcctcgagca tgatcgtgac
    10201 cttctgcccg ttgggcgtgg ccagcgaata gagctggagc gggtgctttc cgaccggcag
    10261 cgccctgtcc tgggtcggtc ctgcgaccgg gcggttgatg ttcgcgaact tgccgccgct
    10321 gggctcgtcc caactccaga ctttgggcgg aacataatcg gtcatcgcgg ctcccttcat
    10381 cgtcggaagg gcgagctagg gaagcgccgg cggcttttcc agtgtcagcg ctgataccgc
    10441 ggccggctag cttgcgctga ccttcaggaa atcgggaagc ggcccgttcc actctgagtc
    10501 gtcctcggcg gcttgcttcg cctgctcttt cggttccgcc gcgcttggct tgcgctcggg
    10561 cgggcgaggc ttgcgctcgg gcttgtcgcg ctctttcggc ttgtgctcgg ccttctccgg
    10621 ctgccttgcc tcgctccgct tcggctctgg ctcgccctta gcgcgcggct caatagcttt
    10681 ctcgccgagc ttcgggatct tgttgccgag catcttttcg atcgccgcga cctggtccga
    10741 atccgccctt gtcgccagcg tgatggcgat tccggttgcg cccgcccggc cggtccgccc
    10801 gatgcggtgg atgtaatcgt ccggctgcca cgggacgtca tagttgaaga cgtggctgac
    10861 gcccttcacg tcgagtccgc gggcagcgac gtcggaggcg acgaggatgt tgatctcgtc
    10921 cttcttgaac cggtcgagct cggcgatccg gtccgactgg tccatgtcgc cctggatctg
    10981 cccggccgcg aagcgcgccc gcttgaggct cgtcgtaagc tcgcggaccg tggtctttcg
    11041 gttgcagaag atgattgcgt tcctgacgcc ctcttcgcga agcagcttgc ggagcacgtc
    11101 gcgcttgtcg gtgggcttca cctcgacgat ccgctggtcg atgttgacat tggcggtcgc
    11161 tgggcgcgcc acctccacct tcttggggtc cttcaggaaa cgcgaggcca gcttctggat
    11221 cgggggcggc atcgtcgccg agaacagcaa tgtctgccgg ttggccggaa gcttcgaaca
    11281 gatttcctcg atgtcgggga tgaagcccat gtcgagcatc cggtcggcct cgtcgatgac
    11341 gagaagctcg cagccgttca tcaaaatctt gccgcgtttg aacaggtcga ggagccggcc
    11401 cggagtggcg atcagcacgt cgacgccctt ctccagcgcc ttgacctggt cgcccatctg
    11461 tacgccgccg atcagcagcg ccatcgaaag cttgtgatat ttgccgtagg tctcgaaatt
    11521 ctccgaaacc tgcgcggcaa gctcgcgggt cggctccagg atcagcgagc gcggcatcag
    11581 cgcccggctt cggccgtggt ggaggatgtc gagcatcgga agcacgaagc cggccgtctt
    11641 tccggttccg gtctgggcga tcccgatcaa atccttgccc atcagcacgg ccgggatcgc
    11701 gccgcgctgg atcggcgtcg gctcgctata gccgctgtcc gcgactgcgc gcagcaattg
    11761 gtcggagagg ccgaggtcgg caaaagtcat tcaaaacccg gaagttatag gcagggccga
    11821 agcggccgcc gcgtcgtcat cggctatgat ggtttcggcg ccaaagttca agacgaaccc
    11881 gacgtgcggg cgctagcgcc ggaccttggc cttgagctcg cggaaccgct cgatccggca
    11941 cggcgcgccc atccgcactc ggatcgaatc ccgcttcgcg cagactcggt cgtcggcgga
    12001 cctcaggtag aagccgtcgt agaagtcgag cgccgggcaa ttttcgtcca gctcggcgcg
    12061 gatcaggcgc cgtccgggaa ggacgaaatc gacatggtcg ctcgccgaca ggaaggcgcc
    12121 ctggatcgcc cggatcggga tgcagtcggg gcccttgcgc tcgctccact cgacccgcgg
    12181 cgtcggccgt accggcaccc ggatgatgat ctggtcctcg accacgatgc tgcgcacctg
    12241 caccccgctg ccgccggcaa agccgaacag catcggaatc agcgtcagcg cgccgaggag
    12301 tgttacggac agccccatga ggcgccagcc gtcgcaggca agcgttgaat aatcaatgaa
    12361 cctttgcggg gcagcgagtg ggctttcgtg ctaacgtcga gggcgggccg gactggtgat
    12421 gggacccgca gcgcttcagg cggcgccggc gcagctcaac aatggcagcg gggttcatgc
    12481 aggcgcgcaa cgtcgcttcg tctacaacag aatttcagca attccgggga cacaatataa
    12541 ttaggcgaac cgcagccgcc cgcgctgcgc tggcgcaaat aggcaccggc taggcagaaa
    12601 ctatccaaca aacaggcaag ggcgatttcg ctgtcctaca ggggccgcgc ccgcttaggc
    12661 tcctggttcg gccagggagg cgcaatgggg atcatcgcac gaaccggcgg cggctcgcag
    12721 agcgccttcg cggacctgct taaagtcacg caaatggtcg ctcatcgcgt gactttagtg
    12781 accgtaagca acggagcagt tgcgaaaagc gcgggggttg cataaggcgg cggcaaattt
    12841 ccggctcgcc gtcgaacgcg cgccacctca ttgatcaccc gggagaaaca catggcgacc
    12901 gaagcgccga cccagcagca actgccgctt ctctacaccg cgctcgagcc gctgaactcg
    12961 aaggcgcacg cgaagatgaa gatccggccg gtggacaagg ccccgggaat cgcaacgacc
    13021 cacgcggttc cggccacggt ggacgaattc ccgctgcttg cccgtcacta tccgatcatc
    13081 ttcgcggtcg gcgaaaatcc ggtgccgctg gcgctgatgg gcctgtcgga aggggtcaac
    13141 gccttcatgg acgagaacgg ccgcacgacc gagggcaacc tctacatccc cgcctacctg
    13201 cgccgctacc cgttcctcct cgcgcggctc cggccggaca gcgacgagct gtcgctctgc
    13261 ttcgatccga ccgcgggtgc gatcggcgag ttcaaggagg gcgagccgct gttcgaggag
    13321 aatggcgacg cgagcaaggc gaccaaggcg gtcctcgagt tctgcgagca gttcgaaact
    13381 gccggccagc gcacttcggc cttcctcgag gacctgaaga agagcggcct gcttatggac
    13441 ggcgaagtgg cgatacagcc cgaaggcgcg gacaagccgt tcatctatcg cggcttccag
    13501 atggtcgacg aggagaagct tcgggacctt cccggcgaca agctccgcaa gttcaaccag
    13561 agcgggctgc tgccgctgat ctacgcccac ctgttctcgc tgtcgcagat ccgcgaggtg
    13621 tttgcgcgcc aggtcgctca gggcaaaggg ccggcaccgg tcaagcaggc cgagaccgcc
    13681 gaagcgtgag gcttttgcgc cgggccgact tgatcggccg gcgcagggca ccacttgctt
    13741 tcagcccggc tgtcccgtgc gcccccttcg cgggttagcc gggccgcgca ccgagtaatg
    13801 gcgcgttcct ccctgaactg cgccgtcccg gcatcattcg gggcggcgct tttcctatgc
    13861 gacgatcatt cggcggctgc cggaaggcgc cgctccagca gctcggtgcc gagcgagacg
    13921 gccagcgatt cgatcatcgc cgcgatttcg tcgaaacgcc cgcccggttc gccgcccgcc
    13981 gtcaggtagc agcgccggtc gatctcgatc tggagcgcat gcactccgtc ctgcggcgag
    14041 ccgtgccgct cggcgatatg gccgcccgcg aacgggtcgt tggccgccgc cgaaaagccc
    14101 gccttgcccg cgatcgacag cgcccccgac agcagccaag gcgccgcgct tcgcccgaag
    14161 cggtcgccga acaccacctg cgccgacccc tgggaaggcg gcatcgagtg gcagtcgagg
    14221 agaagcgcgc agccgaagcg gtcgacaagc agcgcgagct gttgctcgat cgctcgatga
    14281 tagggccggt aggcttcatc gaggcgccgc tcgagctcgt cccggctgat ggggtggcgc
    14341 cacaggtggc cgtgcgcagc ggtccgggac gggacgatcc caagcccgcc gcgggcccgc
    14401 ggcgagggcc gtgtccggtg cggcaggtgg atcgccgccg ggtccacctc gtcttccgcg
    14461 cggttgcagt cgaccgcggc tctcggcgcc tgtgcgacga ctgcggcaat gccctggccg
    14521 agcgctcgcc atgcgaggcg atcgacgagc gggtcttcga gcggctgaag ggacttggag
    14581 ccgtgcttcg acaaccgcag cagccagtcg ggatagtcgc ggccggaatg cgggatcgac
    14641 agcagcaccg gcaaggggcc gcgcgccggg tggatcagcg gaggagagag cggggtcact
    14701 tgcaactgtc ccagattagg accgacacag ggcccctgca acgctcttgg gcgcaattcg
    14761 cttctggcaa aaggcgcatc atcagcgcat gatagggacc atggcgcgaa tcctgctagc
    14821 cgaagacgac acgtcgatgc gcgaattcct gcagcgtgcg ctgcagcggg ttggctatga
    14881 ggtcgattcg gtcggctgcg gcaccgaggc gatcccgctt ctcgaagccg atcgctacga
    14941 ccttctcctc accgacatcg tgatgccgga aatggacggg atcgagctcg cccagaaggc
    15001 atcggcgatg gaccccgaca tccgggtgat gttcatcacc ggcttcgccg ccgtcgccct
    15061 gcagagcggc cgcgcggcgc cggaagcgaa aatgctgtcg aagccgttcc acctgaagga
    15121 cctggtggcc gaggtcgacc ggatcttcca gaccgaggac cagcacggcc gtctctaagg
    15181 ccgtgctcgg ccg
//
LOCUS       DATAKH010000099         3799 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_17357,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000099 DATAKH010000000
VERSION     DATAKH010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3799
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17357"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1032)
                     /locus_tag="VHN55_04005"
     CDS             complement(<1..1032)
                     /locus_tag="VHN55_04005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019052027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEX2803129.1"
                     /translation="MATEPPADEERSPSDPSDIAPISIVEEMKTSYLDYAMSVIVSRA
                     LPDVRDGLKPVHRRILYACQEAGYVAGRPYRKCSRIVGDVMGKYHPHGDQAIYDALAR
                     MVQPWSMRVPLVDGQGNFGSMDPDPPAAMRYTEARLAKVANFLLSDFDKDTVDFQPNY
                     DASEREPQVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEVLAACRAYMDDPAITSEG
                     LMEHVKGPDFPTGPFILGQSGIHSAYTTGRGSIMMRARHTIEEGRGDRQSIVLTAIPF
                     QVGKSGLVEKIAEAAKDKRIEGVADIRDESNREGVRIVIDLKRDATPEVVLNQLWRHT
                     PAQSSFPANM"
     gene            1322..2602
                     /locus_tag="VHN55_04010"
     CDS             1322..2602
                     /locus_tag="VHN55_04010"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2803130.1"
                     /translation="MKSTTTLVAVLASATALIAAPASAQSYGQEPAQRQVASSAQQAP
                     KPQNPNALKVHSPKVSSGAAKAITALQKAVEAKDSATIPAALEAARAVAKTPGDRYAV
                     ATLQLKAAADAKNDTAIASGLEAVLASGDVAEEEKFGLYINLAATYEGLKQKDRAEQA
                     YRQALQHNPNSVEAMAGLAEANVADGQTKEAIALLRKGIALKAASGAKADENWYRRAV
                     AIAYKAKDPLAVTASREWLEAYPNATSWHDALGIYEQFSNLDEDRLLELLRLRQAANV
                     LESRDYAGFADIAIRKGLSGEAKAVLEQGFAANAIERSDPTFAELYASATQKAKGDRA
                     SLPTAPEAGSTARQTMNLGDAWYGYGDYPKAIEIYRSALAMPGADPDAINLHIGMALA
                     RSGDKAGAIAALEKVGGTKADLARYWLIYIKTKA"
     gene            2769..>3799
                     /locus_tag="VHN55_04015"
     CDS             2769..>3799
                     /locus_tag="VHN55_04015"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEX2803131.1"
                     /translation="MRFDDRLRTVLAQPAASRHDRAVRWRQLVELVARAPPDSDGELV
                     SKAIQQIRATSASVEERVRVAAALAIAALPMPSELVATFAADRLGVAAPVLASARLTA
                     SEWKSVATGASAECRDFIAAMRSEESREPLATAAKEGGGSAPIPSISDVVARIERLRQ
                     AREASESPSGEEPGARQPSAFRWECNEAGEIDWVEGAPRGALVGATIARRSAGHGVDS
                     NVERAFASRAPFHDGVLELPGDAAIGGLWNISGIPAFERSNGRFAGYRGIAERRSGSQ
                     SSAAGGLASDPDSLRELAHEIKTPLNAIIGFAEIITGEYLGPAESRFRERASDIVAQA
                     RLLLGAIEDL"
BASE COUNT          692 a         1212 c         1248 g          647 t
ORIGIN      
        1 catgttggcg gggaacgagg attgcgcagg cgtgtgtcgc cacagctggt tgaggacgac
       61 ctcaggcgtt gcgtcgcgct tgaggtcgat gacgatccga acgccttcgc ggttggattc
      121 gtcgcggatg tcggcgacgc cttcgatcct tttgtccttg gcagcttcgg cgatcttctc
      181 gaccagcccc gacttgccga cctggaaggg aatcgcggtc agcacgatcg attggcggtc
      241 gcccctgccc tcctcgatcg tgtggcgggc acgcatcatg atcgatccgc ggccggtggt
      301 gtaggccgaa tggatgccgg actggccgag gatgaagggc ccggtcggga agtccggtcc
      361 cttcacatgc tccatcagcc cttccgaggt gatcgccggg tcgtccatgt aggcgcggca
      421 ggcggccagc acttctccca gattgtgcgg cgggatgttg gtcgccatcc cgaccgcgat
      481 tccgcccgcg ccgttgacca gcaggttcgg gaagcgcgcg ggaagcacct gtggctcgcg
      541 ctcgctggca tcgtagttgg gctggaagtc gaccgtgtcc ttgtcgaaat cggacagtag
      601 gaaattggcg accttcgcga gcctcgcctc ggtgtaccgc atagccgcgg gcggatcggg
      661 gtccatcgaa ccgaaattgc cctggccgtc gaccagcggc acccgcatcg accacggctg
      721 gaccatccgc gccagcgcgt cgtagatcgc ctggtcgccg tgcgggtgat atttacccat
      781 cacgtcaccg acgatccggc tgcacttacg atacggccgg ccggccacat agccggcctc
      841 ctggcaggcg tagaggatcc ggcgatgaac cggcttcaaa ccgtcgcgaa cgtctgggag
      901 cgcccggctg acgatcacgc tcatcgcgta atcgaggtag ctcgtcttca tttcctcgac
      961 gattgagatc ggggcgatgt cgctggggtc gctcgggctg cgctcttcgt cggccggcgg
     1021 ttcggtggcc aagacaatgt cctatctgtg aaagcgttgg ttacatgggg aacaatgcgc
     1081 acgaacggcg cctgcccccc agataggatg acctagccga tagtgaactc acgcgccacc
     1141 ccgcgcgcac gcgtatacgc gcgcgtggcg cagcgacgct cgagcacgtc cgcgttcaaa
     1201 gggtattcat tgcggttagg ctaccgggtt ggcgatccgc ttgcgcgcga ctatgtccgc
     1261 cgcggatttt cattcccggt tcaatcgccg gcccggccag gcgccggcag aggagaatta
     1321 catgaaatcg acgacgaccc tagtggcagt gcttgcgtca gcgaccgcgc tcatcgcagc
     1381 gccggcaagc gctcagtcat acggccagga acctgctcag cggcaagttg cttcgtcggc
     1441 gcagcaggca ccgaagccgc aaaatccaaa cgcgctcaag gtccattcgc cgaaggtttc
     1501 ctccggcgcc gcaaaggcga tcacggcgct tcaaaaagca gtcgaggcaa aggattcggc
     1561 gacgatcccc gcggcgctcg aggcagcccg cgccgtcgct aagactccgg gcgatcgcta
     1621 tgcggtcgcg actctccagc tcaaggcagc ggccgacgcc aagaacgata ccgctatcgc
     1681 gtccggcctg gaggcggtcc ttgcgtcggg cgacgtggcc gaggaagaaa agttcgggct
     1741 ctacatcaac cttgctgcga cctacgaggg tctgaagcag aaggatcgag ctgagcaggc
     1801 ctatcggcag gcgctacagc acaatcccaa tagcgtcgaa gcaatggccg gccttgccga
     1861 ggcgaatgtg gcagacgggc agaccaagga agcgattgcg ctgttgcgca agggcattgc
     1921 ccttaaggca gccagcggcg ccaaagctga cgagaattgg tacaggcggg cggtcgcaat
     1981 cgcctacaag gcgaaggatc ctctggcggt tacggccagc cgcgaatggc tcgaggccta
     2041 tccgaatgcc acctcctggc acgatgcgct cggaatttat gagcaattct caaatctgga
     2101 cgaggaccgg ctgctcgagc tgcttcgcct gaggcaggcg gcaaatgtgc tcgaatcgcg
     2161 cgattatgcc ggctttgcgg acatcgccat tcgcaagggc ctttcgggcg aagccaaggc
     2221 cgtccttgag caggggttcg ccgccaacgc gatcgagcga agcgatccca cctttgccga
     2281 gctgtatgca agcgcgacgc agaaggcgaa gggtgaccgg gcgagcctcc cgaccgcgcc
     2341 ggaggcgggc tcgactgccc gccagaccat gaacctcggt gacgcgtggt acggttatgg
     2401 cgactatccg aaggcgatcg aaatctatcg ctcggcgctg gcgatgccgg gagccgaccc
     2461 cgacgcgatc aacctccaca tcggaatggc gctcgcccgc tcgggcgaca aggccggtgc
     2521 aatcgccgcc cttgagaagg tcggcggcac gaaggccgat ctcgccagat actggctgat
     2581 ctacatcaag accaaagcct gacgcccaat ctcgggagcc gcccgccgcg gcggctcccc
     2641 atctgttaaa ccccagttat ctctgtcccg tttcgggatg gttaatagct gataacttcc
     2701 ctggagaccg acgcaggata gagcggtcgc tggaggtatt gggtgcaaca gttgcgcgag
     2761 tattgccggt gcgattcgac gatcgcctga ggacggtgct ggcgcagccg gcagcgtcga
     2821 ggcacgaccg cgcggtacgc tggcgccagc tggtcgaact cgttgcgcgc gccccgcccg
     2881 atagcgacgg cgagctcgta tccaaagcaa tccaacagat ccgcgcaacc tcggcctctg
     2941 tcgaggagcg agtccgtgtc gctgcagcgc tcgcgatcgc cgctctccca atgccctcgg
     3001 agttggtcgc gacctttgcg gccgatcggc tcggcgtcgc agctccggtg ctcgcgagcg
     3061 cccggctgac tgcgtcggaa tggaaaagcg ttgcgacggg cgcgagtgcg gagtgcaggg
     3121 acttcatcgc agccatgcgc tcggaggagt cgcgtgagcc gctcgcgacc gccgcgaaag
     3181 agggcggcgg ttcggcgccg atcccctcga tcagcgatgt cgttgcccgg atcgagcgcc
     3241 ttcgccaggc acgagaggcc agcgaaagcc cttcgggaga ggaacccggc gcccgccagc
     3301 ccagtgcctt ccgctgggaa tgcaacgaag cgggcgaaat cgactgggtc gagggcgcac
     3361 ccaggggagc gctggttggc gccaccattg cccggcgatc agcgggtcac ggtgtcgaca
     3421 gcaacgtcga acgggccttt gcatcccgcg cgccattcca cgacggggtt ctcgagcttc
     3481 ccggagacgc cgccatcgga gggctctgga acatcagtgg aattcccgcc ttcgaacgct
     3541 cgaatggccg ttttgcgggc taccggggga tcgccgaacg tcgttccgga agccagtcct
     3601 ccgccgccgg cgggttggcg agtgacccgg attcgctgcg tgagctcgcc cacgagatca
     3661 agaccccgct taacgcgatc attggtttcg ccgaaatcat cacaggcgaa tatctcggcc
     3721 cggcggaaag ccgcttccgc gagcgtgcaa gcgacatcgt cgcgcaggcc cgcctactgc
     3781 tgggcgcaat cgaggacct
//
LOCUS       DATAKH010000100         5638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20903,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000100 DATAKH010000000
VERSION     DATAKH010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5638
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20903"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..1462
                     /locus_tag="VHN55_04020"
     CDS             200..1462
                     /locus_tag="VHN55_04020"
                     /inference="COORDINATES: protein motif:HMM:NF016013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF389 domain-containing protein"
                     /protein_id="HEX2803132.1"
                     /translation="MLISPLMGPAVGLGFALATFDSREMRRSSVALAVGIALAVLFCA
                     AIVALSPLQTVTAEISSRTRPTLFDLVVALLAGLAGTYAMIRGRHGTIVGVIIATALM
                     PPLAVMGFGLATANWPILSGSSLLFFTNLMTIAAAAAVLARLYGFAPKLSPQQSRLQV
                     TIITTVLLVLAVPLALSLRQIAREVVAGSEASQTIARQFPKDARISDLDIDFQARPVD
                     VSATVFTPEYRDGAERELRAPLARLIGEPIALSVDQILTETGSKATAVPSQAQRNASR
                     MAERLALVAGVPVTSVILDRGSKRAVVRAVPIAGADLTAYRTLEDRVARTDSSWTIEL
                     QPPPAPLPDIEVDGDTVDRTALDTAIWAGRRVGLPIRVSGGGQEHSERVADLLRKSGI
                     EATVTSPGAKPGPVSLRWIVPSEEDSRR"
     gene            complement(1488..2279)
                     /gene="murI"
                     /locus_tag="VHN55_04025"
     CDS             complement(1488..2279)
                     /gene="murI"
                     /locus_tag="VHN55_04025"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEX2803133.1"
                     /translation="MNPDSPLLFFDSGVGGLSVLGPTREMLPTAPIVYAADNAGFPYG
                     TKSEEEIGSRVPALLGRLVERFQPRLVVIACNTACTIALDQVRAALDVPVVGTVPAIK
                     PAAEMTRTGIIGVLGTEATIRQPYVDDLAAKFASDLTVLRYGSPELVALAEAKLAGDA
                     VSVEEIRRAAAPLFEHDGAEEMDTVVLACTHFPLLHDELDQAFPGRNWVHGGPGIARR
                     IRYLTREQPWPADYPGGIAVFTGEAPRSILLTALADYGLTEVRSL"
     gene            2339..2929
                     /gene="plsY"
                     /locus_tag="VHN55_04030"
     CDS             2339..2929
                     /gene="plsY"
                     /locus_tag="VHN55_04030"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEX2803134.1"
                     /translation="MTTDQIFAFLTGYLLGSIPFGLLLTRLAGKGDIRDVGSGNIGAT
                     NVLRAGGKALAVATLVLDALKATAAVLIARQLWPGSEILAAAGALIGHLYPLWLKFRG
                     GKGVATYLGLLIPLFPIGAAIFAAAWLAALLLVRISSVAGILAVISAPIAAAAFDRDR
                     LFPSLLLFTLLVLWRHHDNIARLRAGKEPKIASRRG"
     gene            2922..4004
                     /gene="dprA"
                     /locus_tag="VHN55_04035"
     CDS             2922..4004
                     /gene="dprA"
                     /locus_tag="VHN55_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEX2803135.1"
                     /translation="MADDLLARIRLIRSASIGPVTYRQLMTRFGSAQAALDAIPDLAR
                     RGGGKPPSICSEQAARLEAEKVEKLGARYLVLGQGLYPSLLSELDDAPPLLIVKGDLR
                     LLDQPAVAIVGARNASAAACRFARSLAHGLGREGLAVVSGLARGIDSAAHDGSLESGT
                     IGVVAGGIDIFYPPENEKRQEAMFERGLVVAEMPPGTEPRARHFPYRNRIIAGMSLGT
                     IVVEAAPRSGSLITARLAAEAGREVMAIPGSPLDPRARGCNQLIRDGATLVQDATDVV
                     EAVQPLKARVAAPTRRYEPQPEQFDGEAVETVESLLGPSPVPVDEIIRLSGAPSGAVQ
                     MALLELDLAGRLDRHAGGKVSLRPAS"
     gene            complement(3982..4587)
                     /locus_tag="VHN55_04040"
     CDS             complement(3982..4587)
                     /locus_tag="VHN55_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803136.1"
                     /translation="MGMTDPSYDECLVEAELRARAAYSEPHRCYHDERHLDSCLAELD
                     SVHDLAERDCRLLRWAILWHDAVYEPGQRDNEQKSAELARFELTRCGVPEQDVAEVER
                     LIRLTEFHRSDPGDELGRLIVSIDLAILGSDPDRYRQYAADVRTEYAHVRDPLWRTGR
                     ALVLQRLLDCDPLYPHPTFRNGLEARARENMKSELSSLGEG"
     gene            4713..>5638
                     /locus_tag="VHN55_04045"
     CDS             4713..>5638
                     /locus_tag="VHN55_04045"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HEX2803137.1"
                     /translation="MKLVVVESPAKAKTIEKYLGPGHRVLASFGHVRDLPAKDGSVDT
                     ENDFAMEWQVSPDKMRQLKAITDEAKDADTLVLATDPDREGEAISWHLAEVLRKRKAL
                     PAKVQRVAFNAITKSAVTEAMAHPRELDEDLIDAYKARRALDYLVGFTLSPILWRKLP
                     GAKSAGRVQSVALRLIVDREREIELFRPQEYWSIVASFEADGQGFTARLVEFDGAKIE
                     RLTIGNRGDADRAKAAVEAGHFTVSSVETKPFSRNPPPPFTTSTLQQEAARKLGFAAS
                     HTMRVAQALYEQGQITYMRTDGVDMAGEAISAA"
BASE COUNT          975 a         1832 c         1835 g          996 t
ORIGIN      
        1 tggggcgcgg ccaatgacga tgtcctcaac tgcatggtgg gaacgctgcg tcgttcgcgg
       61 cgtggaccac cgcgcggtca tggacgaggt ctgcgacaac gcaggctggt cgagccatta
      121 ttccttcatg atcctgatgt cggcaggcat cgcggttctt gggctgctcc tttaatcacc
      181 ggcaatcgtc attggtgcga tgctgatttc gccgctgatg ggcccggccg tcggactcgg
      241 atttgcgctg gccaccttcg attctcggga gatgcggcga tcgtcggtcg cgctagccgt
      301 tggaatcgcg ctggccgtgc tcttttgcgc agcgatcgtt gctctctcgc ccctgcagac
      361 ggtgaccgcc gaaatctcat cgcgaacgcg gccaactctg ttcgacctgg tcgtcgcgct
      421 gctggcgggg cttgccggaa cctacgcgat gatccgcggc cggcacggga ccatcgtcgg
      481 agtgatcatt gccacagccc tgatgccgcc gctcgcggtg atgggcttcg gcctggcaac
      541 ggcgaactgg ccgattctga gcggttcgag ccttcttttc ttcaccaacc tgatgacgat
      601 tgccgcggct gccgcggtgc ttgcgcgact ctacggcttc gcgcccaagc tgtcgcccca
      661 acagagccgg ctccaggtga cgatcatcac taccgtcctg ctcgtccttg ccgttccact
      721 cgcgctgtcg ctgcgccaga tcgcgcgcga agtcgtggcg ggcagcgaag caagccaaac
      781 cattgcacgg caattcccca aggatgcgcg gatctcggac ttggacatcg actttcaagc
      841 ccggccggtg gacgtgtctg caacagtctt tacccccgaa tatcgtgatg gcgccgagcg
      901 cgaattgcgg gctccgctgg cgcgattgat cggcgagccg attgcccttt ccgtagacca
      961 aattctcacg gagacgggct cgaaagccac cgccgtccct tcgcaagcgc aacgcaacgc
     1021 ctctcgtatg gccgagcggc ttgctctcgt tgccggtgtt ccagtgacga gcgtgatcct
     1081 tgaccgaggc tcgaagcggg cagtcgttcg ggcggttccc atcgctggcg ccgacctaac
     1141 tgcctaccga acgctcgaag accgggttgc ccggacggac agcagctgga cgatcgagct
     1201 gcagccgcca ccggcgccac tgcccgatat cgaagtcgac ggagataccg tggatcgaac
     1261 agcactcgac accgcgatct gggctggccg gcgagttggc ctgccgatca gagttagcgg
     1321 gggcggccaa gagcattctg agcgggttgc agatcttctg cgtaaatccg gaattgaagc
     1381 gaccgtcact tcgccaggcg caaagcccgg accggtttcg ttgcgctgga tcgtgccgag
     1441 cgaggaagac agtcgccgct agaggcgagt cggacggtca aacttactta cagtgatcga
     1501 acctcggtga gcccgtagtc ggcgagcgca gtcaagagga ttgagcgcgg cgcctcgccc
     1561 gtgaagacgg cgattccgcc gggataatcc gcgggccagg gctgctctcg ggtgagatag
     1621 cgaatgcgcc tcgcgatgcc cggcccgccg tgaacccagt ttcggcccgg gaaggcttgg
     1681 tcgagctcgt cgtgaaggag cgggaagtgc gtgcaggcga gaacgaccgt gtccatttcc
     1741 tcggcgccgt catgctcgaa cagtggcgca gcggcacggc ggatctcctc gacggacacg
     1801 gcatcgccgg caagcttcgc ctcggccaga gcgaccagct ccggagagcc gtagcggagc
     1861 accgttaggt cgctggcgaa ctttgcagca aggtcgtcga cataaggctg gcggatcgtc
     1921 gcctcggtgc cgagaacgcc gataattccg gtcctggtca tctcggcggc aggcttgatc
     1981 gcggggacgg taccgacgac tggcacgtcg agcgcggcgc ggacctggtc gagcgcgatc
     2041 gtgcaggcgg tgttgcaggc aatcacgacg agccgcggct gaaagcgctc gaccagccgg
     2101 ccgagcaggg cagggacccg cgagccgatc tcctcttccg atttcgtgcc gtagggaaat
     2161 ccggcattgt ccgccgcgta gacgatggga gcggtcggca gcatctcgcg agttggcccg
     2221 agcacggata gcccaccgac acccgagtcg aagaacagaa gtggcgagtc aggattcacg
     2281 ctgccgcatt tgactgacac cgaagtcgcc tgcaactctg ccggcacgag ggggcattgt
     2341 gacgaccgac cagatattcg cattcctgac cggctatctg ctgggctcca ttccgttcgg
     2401 gctgctgctg acgcgacttg cggggaaggg cgacatccgg gacgtcggct cgggcaatat
     2461 cggcgcgacc aacgtgctcc gtgccggagg caaggcgctg gccgtggcga cgctggtgct
     2521 cgatgcgctc aaagcgaccg cagcggtgct gatcgctcgc cagctatggc cgggaagcga
     2581 aatcctggcg gcggcagggg cgctcatcgg ccacctctat ccgctgtggc taaagttccg
     2641 cggcggcaag ggcgtcgcca cctatctcgg gctgttgatc ccgcttttcc cgatcggcgc
     2701 cgcgatattt gcggctgcgt ggctcgcggc cctcctgctg gtccggattt cgtcggtcgc
     2761 gggaattctc gccgtcatca gcgctcccat cgcggctgcg gccttcgatc gtgaccggct
     2821 gttcccgagc ctgctccttt tcacccttct cgtgctgtgg cgccatcacg acaacatcgc
     2881 tcggctccgt gccggcaagg agccgaagat cgcgagcagg cgtggctgac gacctgctcg
     2941 cgcgcatccg gttgatccgc tccgcttcga tcgggccggt cacctatcgc cagctgatga
     3001 cccggttcgg ctccgcacaa gctgcgctcg acgcgatccc ggaccttgcg agacgcggcg
     3061 gcggaaagcc gccttcgatc tgctccgagc aggccgcgcg gctcgaggcc gagaaggtgg
     3121 aaaagcttgg tgctcgctac ctggttctcg ggcagggact ctatccgtct ctcctgtccg
     3181 agctcgacga cgcgccgccg cttctcatcg tgaaagggga tcttcgcctt ctcgaccaac
     3241 ctgccgtcgc aatcgttggt gcgcgcaatg catccgcggc cgcctgccgg ttcgctcgaa
     3301 gccttgccca cgggctggga cgggagggtc tcgcggtcgt gtccggcctg gctcgcggaa
     3361 tcgattcggc ggctcacgac ggatcgctcg agagtggcac gatcggtgtc gtcgccggcg
     3421 gaatcgacat cttctatccc cctgaaaacg aaaagcggca ggaggcgatg ttcgaacgcg
     3481 ggctggttgt cgccgaaatg ccgccgggga cggaaccgcg cgctcggcat ttcccttacc
     3541 gcaaccgaat tatcgcaggg atgagcctcg gaaccatcgt cgtcgaggcg gcgcccaggt
     3601 ccggttcgct gatcaccgcg cggctcgctg cagaagccgg gcgcgaggtc atggcaatcc
     3661 caggatcgcc gctcgacccg cgagctcgcg gctgcaacca gctgatccgc gacggcgcga
     3721 ctctcgtcca ggatgcgacg gacgtcgtcg aagccgttca gccgttaaaa gccagggttg
     3781 ccgcgccgac caggcgctac gagccgcagc cggagcagtt cgacggcgaa gcggtcgaga
     3841 cggtcgagtc cctgctcgga ccttcgccgg tgcccgtcga cgagatcatt cgcctctccg
     3901 gcgctcccag cggcgccgtc caaatggcgc tcctcgagct tgacctcgcc ggccgactcg
     3961 accgccacgc cggcggaaag gtcagccttc gcccagcgag ctgagttcgc tcttcatatt
     4021 ctcccgcgcc ctcgcttcga gaccgttgcg gaacgtcggg tgcggataga gggggtcgca
     4081 atcgagcagg cgctggagga ccagcgcgcg gccggttcgc catagcggat cgcgaacgtg
     4141 cgcatattcg gtgcggacgt cggcggcata ttggcggtag cggtcggggt cggagccgag
     4201 gatcgccagg tcgatcgata cgatcagccg accgagctca tcgccggggt cgctcctatg
     4261 aaattcggtg agtcggatca ggcgctccac ttccgcgaca tcctgttcgg gcactccgca
     4321 gcgggtcagc tcgaagcgcg caagctcagc gctcttctgc tcattgtcgc gctgcccggg
     4381 ctcatacacc gcgtcatgcc aaaggattgc ccatctcagc agccggcaat cgcgttcggc
     4441 gagatcgtga accgagtcca gctcggcaag gcaggaatca agatgccgct cgtcatgata
     4501 acatcggtgc ggctccgaat aagccgcacg cgcacgcaat tccgcctcga caaggcactc
     4561 gtcgtaactc gggtccgtca tacccaccca acgcgctaaa acggattcgg cacgagctaa
     4621 atccctgatg cggccgccga tgtcgaggct attgacgccg ggaatctctc cgcctcacca
     4681 tcgcgcgtac gtacgtatag gaaagaatcc gcttgaaact ggtcgtcgtc gaatcgcccg
     4741 ccaaggcgaa aacaatcgaa aaatatctgg ggcctggcca tcgcgtgctc gcgtccttcg
     4801 ggcacgtgcg cgaccttccc gccaaggatg ggtcggtgga cacagaaaac gacttcgcga
     4861 tggaatggca ggtctcgccc gacaagatgc gccagctcaa ggcgatcacc gacgaggcca
     4921 aggatgccga tacgctggtc ctggcgaccg accccgaccg tgagggggag gcgatcagct
     4981 ggcacctcgc cgaggtgcta cgcaagcgca aggcgctccc ggcaaaggtg cagagggtcg
     5041 cgttcaacgc cattaccaag tcggccgtca ccgaggcgat ggctcacccg cgcgagctcg
     5101 atgaggactt gatcgacgcc tacaaggcgc ggcgggcgct ggactatctc gtcggcttca
     5161 ccttgtcgcc gatcctgtgg cgaaagcttc cgggggcgaa atcggcgggc cgtgttcagt
     5221 cagtcgcatt gcggctgatc gtcgaccgcg agcgcgagat cgagctcttc cggccgcagg
     5281 aatattggtc gatcgtcgcc agcttcgaag cggacgggca gggctttaca gcgcggctcg
     5341 tcgagttcga cggtgccaaa atcgagcggc tgacgatcgg caatcgcggc gatgccgacc
     5401 gcgccaaagc cgctgtcgag gccggccact tcaccgtctc gtcggtcgag accaagcctt
     5461 tctcgagaaa cccgccgccg ccgttcacga cctccaccct gcagcaggaa gcggcgcgaa
     5521 agctcggatt tgccgccagc cacacgatgc gggtcgccca ggcgctctac gagcaggggc
     5581 agatcaccta tatgcggacc gacggcgtcg acatggccgg tgaggcgatc agcgccgc
//
LOCUS       DATAKH010000101         3637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32162,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000101 DATAKH010000000
VERSION     DATAKH010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3637
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32162"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VHN55_04050"
     CDS             <1..235
                     /locus_tag="VHN55_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX2803138.1"
                     /translation="VATVAIEGMKFITPIHVRDLISVYAHVERVGRTSMGVRIEVVAT
                     RDRGKTDIKVTEGLFTFVALDEQHRPRSVDVIA"
     gene            complement(299..859)
                     /locus_tag="VHN55_04055"
     CDS             complement(299..859)
                     /locus_tag="VHN55_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HEX2803139.1"
                     /translation="MINNRQGGRRRGRGGQRGQNLGGNRQDNRQRGNAAQLLEKYKNM
                     ARDAQLAGDRVQSEYFLQFAEHYFRVLDENRSRFDEPRNQRGDDSSDDNENDNQEESA
                     SASDQDRGDGDNRRSRSSGRGRPQRNGAETNADTEENHERIAVTALPPAIGREPDGED
                     EPAAKPKRRTRKPRNDGDGADIAPAA"
     gene            complement(1088..1918)
                     /gene="prmC"
                     /locus_tag="VHN55_04060"
     CDS             complement(1088..1918)
                     /gene="prmC"
                     /locus_tag="VHN55_04060"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEX2803140.1"
                     /translation="MKPLARALADATRQLSQTSDTPRLDAELLMAESLHIDRDRLILN
                     PPDRDPPKRFWTMVKRRLKGEPVAYITGRRAFWNIELHVGPGVLVPRPDSEVLIASAI
                     EHFSGSPDRPRRILDLGTGPGTLLLAALDLWPEATGLGVDSSRKALSYASANSRRLGF
                     EKRARFKIGDWATGIDEQFDLVLCNPPYVAEDEPLGPGVVEHEPEEALFAGPEGLDSI
                     RRLAPEFPRLLAPGGIAAVEIGPEQGSSAVELLERDGLAARIAQDLGGRDRAVLLTWV
                     "
     gene            complement(1952..3031)
                     /gene="prfA"
                     /locus_tag="VHN55_04065"
     CDS             complement(1952..3031)
                     /gene="prfA"
                     /locus_tag="VHN55_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEX2803141.1"
                     /translation="MTKISSERIASIEGRKQELADAMARPDLSPDEFVKLSKDYAAIE
                     PVAAAAREVRRLRAELESLTAMTRDADADMRAMAEEELHEIERKLPEAERALAVKLLP
                     RDAADERAAMLEVRAGTGGDEAALFAGDLLRMYQRFADEQGWRFELISASASEAGGYK
                     EAIASINGRGVFAKLKFESGVHRVQRVPVTEAGGRIHTSAATVAVLPEAEDVDVQIED
                     KDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGLVVIQQDEKSQHKNKAKALKVLRTR
                     LFELERERLASERAGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHKLGQILEG
                     PGLGELVVALIAEDEAQRLAGLDDA"
     gene            complement(3028..>3637)
                     /locus_tag="VHN55_04070"
     CDS             complement(3028..>3637)
                     /locus_tag="VHN55_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEX2803142.1"
                     /translation="DPRDRPVADAAPAIDDFLTPDASDFFAQVAAGLDSAGVKWTRNP
                     RLVRGLDYYRHTAFEFVTDRLGAQGAVIAGGRYDGLIEALGGPHTPAVGWAAGIERLA
                     MLIDEPEAERPAVVVVPLGERAEQAAQAIVAGLRREGVATEMAFRGNMKKRMARANAA
                     GARYALIIGDDELDSGKVQLKDLTTGEQRPVSLDHIVEAVGG"
BASE COUNT          550 a         1232 c         1181 g          674 t
ORIGIN      
        1 ggttgcgacg gttgcgatcg agggaatgaa gttcatcacc ccgatccacg tgcgcgacct
       61 gatttcggtc tacgcccatg tggagcgggt cggccgaacg tcgatggggg taaggatcga
      121 ggtcgtcgcg acacgagatc gcggcaagac cgacatcaag gtcaccgaag gcctgttcac
      181 cttcgtcgcg ctcgacgagc agcatcgccc ccggtcggtc gacgtcatcg cataaagcgc
      241 acacgaaaac ggcccgccat cgctggcgag ccgtcgttga attcgattgg cttttacgtc
      301 aggcggcagg cgcgatgtcc gctccgtcgc catcattgcg cggcttgcga gtgcggcgct
      361 tcggcttggc cgcaggctca tcctcgccat cgggctcgcg gccgattgcc ggcggaagcg
      421 ctgtcaccgc gatgcgctca tgattctctt ccgtatcggc attcgtctcg gcgccgttgc
      481 gctgcgggcg gccgcggccg gaagagcggc tgcggcggtt gtcgccgtcg ccgcggtcct
      541 ggtccgaagc gcttgccgat tcttcctggt tgtcgttttc gttgtcgtct gaagaatcgt
      601 cgccccgctg gttgcgcggc tcgtcgaagc gcgagcggtt ctcgtcgagg acgcggaaat
      661 aatgttccgc gaactgcagg aaatactcgc tctgcacgcg gtcgcccgcg agctgcgcat
      721 cgcgcgccat gttcttgtat ttctcgagca gctgcgccgc attgccgcgc tggcggttgt
      781 cctgccggtt acccccgagg ttctggcccc tctggccccc gcggccgcgc ctgcggccac
      841 cctgtcgatt attgatcaaa tgccgacttc cttaatctgt agaagttcgc ccccgtgtcc
      901 cttgctaacc tgaagtgcgc cctgtgcgca gctccgcttt tgtccttccg gtccgcgcca
      961 agcgcttcgc gaacgggccg attgcgtcgg gggtaggatg gaatgcgccg aggtgattgc
     1021 caacgagcgg acccggtcct gacacctgat gtagtggcga ttggccgcaa ttccaagcga
     1081 atttgttcta gacccacgtc agcaggacag cccggtcgcg cccgccaagg tcctgggcga
     1141 ttcgagcggc cagcccgtcc cgctcgagaa gctcgactgc cgaactgccc tgctcgggac
     1201 cgatttctac cgctgcaatg ccgccgggcg cgagtagccg gggaaattcg ggagccaagc
     1261 ggcgaataga gtccagtccc tcgggacctg cgaacaaggc ctcttcgggc tcgtgctcca
     1321 cgacacccgg cccgagtggc tcgtcctcgg cgacataggg cgggttgcac aggacaaggt
     1381 cgaactgttc gtcgatgccg gtcgcccagt cgccgatctt gaaccttgcg cgcttttcga
     1441 agcccagccg ccgcgagttg gccgacgcat aggacagggc cttgcgcgat gaatccacgc
     1501 caaggccggt tgcttccggc cacaggtcca gcgcggcgag gagcagcgtc cccggcccgg
     1561 tgccgagatc gaggatacgc ctcggccgat cgggcgagcc gctgaaatgc tcgatcgccg
     1621 acgcaatcag cacctcgctg tccggcctcg gcacgagcac tccgggaccg acgtggagct
     1681 cgatgttcca gaaggcgcgc cggccggtga tgtaggcgac cggctctccc ttcagccgcc
     1741 gcttcaccat cgtccagaag cgcttggggg gatcgcggtc gggcggattg aggatgaggc
     1801 gatcgcggtc gatgtgaagc gattccgcca tcagcagctc ggcgtcgaga cgcggggtgt
     1861 cgctcgtctg ggaaagctgg cgagtggcat cggcgagcgc tcgggcgagc ggcttcaatg
     1921 ctcggatcca ctccgctcag gcggagcgga gtcaagcatc gtccaggccc gcgagccttt
     1981 gcgcttcgtc ctcggcgatg agcgcaacaa ccaattcgcc gaggcctggc ccttcgagga
     2041 tttgcccgag cttgtggagt gtcaggttga tccggtgatc ggtaacccgc ccctgcggga
     2101 aattgtaggt tcggatccgc tccgaccggt cgcccgagcc gaccatcgac ttgcgcgctc
     2161 cggcccgctc gctcgcaagc cgctctcgct cgagctcgaa caggcgggtg cgaagcacct
     2221 tcagtgcctt cgccttgttc ttgtgctgcg atttttcgtc ctgctggatc acgacgagcc
     2281 cggtcgggag gtgcgtgatc ctgaccgcgc tgtcggtcgt gttgaccgac tgcccgccag
     2341 ggcccgacga tcgatagacg tcgatgcgca ggtccttgtc ctcgatctgg acgtcgacgt
     2401 cctcggcctc gggaaggacc gcgaccgtcg ccgccgaggt gtgaattcgg ccgcccgctt
     2461 cggtaaccgg gacccgctgc acccggtgca cgccgctttc gaacttgagc ttggcgaaca
     2521 cgccgcggcc gttgatcgag gcgatggcct ccttgtagcc gccggcctcg gatgcgctgg
     2581 ccgagataag ctcgaaacgc catccctgct cgtccgcaaa gcgctggtac attcgcagca
     2641 agtcgccggc gaacagcgct gcctcgtcgc cgccggtgcc ggcgcgaacc tcgagcatcg
     2701 ccgcccgctc gtcggccgca tctcgcggca gcagcttcac tgcaagagcg cgttcggctt
     2761 cgggtagctt gcgctcgatc tcgtgtagct cttcctcggc cattgcccgc atgtccgcgt
     2821 cagcatcgcg ggtcatggcg gtcagactct ccagctccgc gcgcaagcgc cgcacttcgc
     2881 gcgccgccgc cgccactggt tcgatggccg cataatcctt cgacagcttg acgaattcgt
     2941 caggcgaaag gtcggggcgc gccattgcgt cggcgagttc ctgcttgcgc ccctcgatcg
     3001 acgcaatccg ttccgacgag attttggtca cccgccgaca gcctcaacga tatggtcgag
     3061 cgacacgggc cgctgttcac cggtcgtcag atccttgagc tggactttgc cgctatcgag
     3121 ctcgtcgtcg ccgatgatga gcgcatatct cgccccggcc gcattcgccc gtgccatgcg
     3181 cttcttcatg ttgccgcgga acgccatctc cgtcgcgaca ccctcgcggc gaaggccagc
     3241 gacgatcgcc tgagccgcct gctcggcacg ctcgccaagc gggacgacga cgacggccgg
     3301 cctttcggcc tcgggttcgt cgatcagcat cgcaagccgc tcgatccccg ccgcccagcc
     3361 gaccgccggc gtgtgcggcc cgccgagcgc ttcgatcagc ccgtcgtagc ggccgccggc
     3421 gattaccgcg ccctgcgctc caagccggtc ggtcacgaac tcgaaggccg tgtgccggta
     3481 ataatccagg ccgcggacga ggcgggggtt acgcgtccac ttgacgccgg cagagtcgag
     3541 gccggcggcg acctgggcga agaaatcgct ggcgtcgggc gtgaggaaat cgtcgatcgc
     3601 cggagcggca tcggcaactg gccggtcgcg cgggtcc
//
LOCUS       DATAKH010000102         2614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_28021,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000102 DATAKH010000000
VERSION     DATAKH010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28021"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="VHN55_04075"
     CDS             complement(<1..591)
                     /locus_tag="VHN55_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010406884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEX2803143.1"
                     /translation="MNMIQALNSAHKVAMERDPDVIVYGEDVGYFGGVFRVTEGLQKQ
                     FGKQRSFDAPISEGGIVATAVGMAAYGLRPVIEIQFADYIYPGYDQIVSEVAKIRYRT
                     AGEWGMPMVIRSPYGGGIFGGQTHSQSPESLFTHIAGLKTVIPSTPYDAKGLLIAAIE
                     DPDPVIFFEPKRIYNGPFDGHHDKPVKPWSKHPASDV"
     gene            complement(600..1868)
                     /locus_tag="VHN55_04080"
     CDS             complement(600..1868)
                     /locus_tag="VHN55_04080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010237721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate dehydrogenase
                     (2-methylpropanoyl-transferring) subunit alpha"
                     /protein_id="HEX2803144.1"
                     /translation="MRDKENSKKPNRPQLSLHVPEPPFRPGDTPDFSSLQIPEAGSAP
                     KPDIAVAAADTEQLAKGLVRVLGDDHKAVGPWDPKLDPDTLRKILRDMVLQRIFDDRM
                     YRAQRQGKTSFYMKATGEEAIAITAAAALDRDDMNFPTYRQQGLLIARGYPLVEMMCQ
                     VYSNKGDKLRGRQLPIMYSSKDHGFFTISGNLGTQFPQAVGWAMASAIKGDSRIAVGW
                     IGDGATAEGDFHAGMTFAAVYNAPAILTVVNNQWAISSFSGIAGAEKATFAQRAIGYG
                     IPGLRVDGNDVLAVYAAFRWAADRARSNLGPTLVEFFTYRAEGHSTSDDPSGYRPAGE
                     AKAWPLGDPLERLKAHLIALGEWDEERHEATRAECDAEVRAAQKEAEKLGVLPEQGKD
                     NIGSMFDDVYAEVPPSLAEQRAEALDEAKR"
     gene            1984..2277
                     /locus_tag="VHN55_04085"
     CDS             1984..2277
                     /locus_tag="VHN55_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3297 family protein"
                     /protein_id="HEX2803145.1"
                     /translation="MAEEKKSELPDRLSLDPRSPHFDGEILKNPVGIKFNGQEKTNVQ
                     EYCVSQGWIKVAAGRSRDRYGNPMTITLKGKVEPYLETSNDQAEGGEGAASDG"
     gene            complement(2238..>2614)
                     /locus_tag="VHN55_04090"
     CDS             complement(2238..>2614)
                     /locus_tag="VHN55_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803146.1"
                     /translation="KKAGIAFWKIGKWDDAPWPLANFPNPARGQGTAGAPARLSAQPE
                     QKGRTMLGKIAGALIGKRLAGRGQGAKGAIIGYGAAALARRSIPALAAVALGGWAFKK
                     FREKRRGEPDYPSEAAPSPPSA"
BASE COUNT          439 a          847 c          829 g          499 t
ORIGIN      
        1 aacatcgctc gccggatgct tcgaccacgg cttcaccggc ttgtcgtgat gaccgtcgaa
       61 cgggccgttg tagattcgct tgggctcgaa gaagatcacc gggtcggggt cctcgatggc
      121 ggcgatcagc aaccccttcg cgtcgtaagg cgtcgacggg atcaccgtct tcaggccggc
      181 gatgtgggtg aaaaggcttt ccggcgactg gctgtgggtc tggccgccga agattccgcc
      241 gccatagggc gagcggatca ccatcggcat cccccattcg ccggcggtcc ggtagcggat
      301 cttggcgacc tcgctgacga tctggtcgta gccgggatag atatagtcgg cgaactggat
      361 ttcgatgacc ggccttaggc cgtaagcagc catgcccacc gctgttgcga caatcccccc
      421 ttcgctgatc ggagcgtcga aggagcgctg ctttccgaac tgcttctgga gtccttcggt
      481 gaccctgaag acgccgccga aatagccgac gtcctcgcca tagacgatca cgtcggggtc
      541 gcgctccatc gccaccttgt gcgcgctgtt gagcgcctgg atcatgttca tcgtcgccat
      601 cagcgcttcg cctcgtcgag ggcttcggcc cgctgctccg caaggctcgg cggaacctcg
      661 gcatagacgt cgtcgaacat gctcccgata ttgtccttgc cctgctcggg gaggaccccc
      721 agcttctcgg cttccttctg cgcggcccgg acttcggcgt cgcactctgc gcgggtcgct
      781 tcgtgacgtt cctcgtccca ctcgccaagc gcgatcagat gcgccttgag ccgctcgagc
      841 ggatcgccca gcggccacgc cttggcctcg cccgccgggc ggtaaccgga gggatcgtcg
      901 gaagtggaat ggccctcggc gcggtaggtg aagaactcga ccagggtagg cccgagattc
      961 gagcgggctc ggtcggctgc ccagcgaaag gcggcgtaaa cagcgaggac atcattgccg
     1021 tcgacgcgaa ggccgggaat tccgtagccg attgcccgtt gagcgaaggt cgccttctcc
     1081 gcgcctgcaa tcccggaaaa gctggagatc gcccactggt tgttgaccac cgtcaggatc
     1141 gccggcgcat tatagaccgc agcgaaggtc attccggcgt ggaagtcgcc ctcggccgtc
     1201 gcaccgtcgc cgatccagcc cacggcgatc ctgctgtcgc ccttgatcgc gctggccatc
     1261 gcccacccga ccgcctgcgg gaattgagtc ccgagattgc ccgagatggt gaagaagccg
     1321 tggtccttgg acgaatacat gatcggaagc tggcgcccgc gaagcttgtc gcctttgttg
     1381 gaatagacct ggcacatcat ctcgacgaga ggataaccgc gggcgatgag aagcccctgc
     1441 tggcggtacg tcgggaaatt catgtcgtcg cggtccaggg cggctgcggc ggtgatcgcg
     1501 atcgcctcct cgcccgtcgc cttcatgtag aagctcgtct taccctggcg ctgcgcgcgg
     1561 tacatgcgat cgtcgaagat ccgctggagc accatgtcgc ggaggatctt gcggagggta
     1621 tcggggtcga gcttcgggtc ccacgggccg accgccttgt gatcgtcgcc gagcactcgc
     1681 accagtccct tcgccagctg ctcggtgtcc gcggcggcga ctgcgatgtc cggcttcggc
     1741 gccgaacccg cttccgggat ttgaagcgac gaaaagtctg gcgtgtcgcc gggccggaac
     1801 ggcggctccg gcacgtgaag cgacagctgg ggccggttcg gcttcttcga attctctttg
     1861 tctcgcattt ggatgaggcg cttaatcgcg actcgcgcgg gcggcaactg gcacagacaa
     1921 gtaaacttta catcggttgc gattcattga cgctcgccct tcgtgggcgc taggcgagcg
     1981 gccatggccg aagagaagaa gtcagagctg cccgaccggc tgtcgctcga tccgcgcagt
     2041 ccacatttcg acggagaaat cctgaagaac cccgtgggaa tcaagttcaa cggccaggaa
     2101 aagaccaacg tccaggaata ttgcgtttcc caagggtgga tcaaagtcgc tgccgggcgc
     2161 agccgcgacc gctacggcaa cccgatgacg atcacgctca agggcaaggt cgagccctat
     2221 ctcgaaacct cgaacgatca ggcggaaggc ggcgagggag ccgcttcgga cggatagtcg
     2281 ggttcgcccc ggcgcttctc cctgaacttc ttgaacgccc atccgccgag cgcgacggcg
     2341 gcgagcgccg gtatgctccg gcgcgctagg gccgccgcgc cgtagccaat gattgctccc
     2401 ttggcgccct ggccacgccc ggccagtcgt ttgccgatca acgctcctgc gatcttcccc
     2461 agcatcgtcc tgcctttctg ttctggttga gcgcttaagc gagccggcgc gcccgcggtt
     2521 ccttggccgc gcgccgggtt gggaaaattc gccaacggcc atggcgcgtc gtcccatttc
     2581 ccgatcttcc aaaaggcgat ccctgccttt tttg
//
LOCUS       DATAKH010000103        38046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2142,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000103 DATAKH010000000
VERSION     DATAKH010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 38046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38046
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2142"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VHN55_04095"
     CDS             complement(<1..797)
                     /locus_tag="VHN55_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX2803147.1"
                     /translation="MRYLPLSDSDRSQMLAAVGASSIDDLFVDVPQEARLDGLIEGLT
                     LHASELSVERQMNAMAAKNMVAGDVPFFLGCGAYRHHVPASVDHIIQRGEFLTSYTPY
                     QPEIAQRTLQVLFEFQTQVARLYGCDIANASMYDGSTACWEAVLMAARITRRKKAILS
                     TGLHPHYVSVCTTMARFTGDTLETSTPQLSADTDADRLISAIDDETSAVVVQYPDILG
                     RIADLSPIAEAAHAKGALLIAVVTEPVALGLIRSPGEMGADIVVGEG"
     gene            complement(798..1562)
                     /locus_tag="VHN55_04100"
     CDS             complement(798..1562)
                     /locus_tag="VHN55_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2803148.1"
                     /translation="MGEDPLTQIAASTSRWVAADYARVGGFVAELGEAALDLLDPKPG
                     ERVLDVGCGDGSLSLKIIDRGAEVVGIDNSPEMVEAARANGVFAEVMDAAEMAFDREF
                     DAAFSNASLHWMLDRYRVAKAIFNALRLGGRFAGEMGGEGNLARLREALDEELVIRGY
                     APPSEAANWYASAEDFADIYEAAGFTQIDARLIDRPTPIQHGIAAWVTTFRRGWLDRA
                     GVPDDERTEIGAAVADRLASNTADYVRLRFIMRKPS"
     gene            complement(1544..1915)
                     /gene="gcvH"
                     /locus_tag="VHN55_04105"
     CDS             complement(1544..1915)
                     /gene="gcvH"
                     /locus_tag="VHN55_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEX2803149.1"
                     /translation="MTTYFTREHEWIQVDGDTATVGITDHAQEALGDIVFTEVPEAGK
                     KLAKGQEAAVVESVKAASDVYSPVSGEVTEGNQAIVDDPALVNSDAEAGGWFFKIKLS
                     DTSELDGLMDEAAYRDWVKTL"
     gene            complement(1917..3110)
                     /gene="gcvT"
                     /locus_tag="VHN55_04110"
     CDS             complement(1917..3110)
                     /gene="gcvT"
                     /locus_tag="VHN55_04110"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010164602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEX2803150.1"
                     /translation="MSREVHNGPTDQHHEARGTPYTGAPEGEPAPEPLPLALDGWHRA
                     RGGRMVEFAGYWMPVQFEGIMAEHLWTRENAGLFDVSHMGQLLIHGPDVDTALETLLP
                     GELKGLAGRKLRYSMLLDDSGGIIDDLMATRRGEEFYLVVNGATKHGDIEVMRQALPD
                     TIYLDHMTGQALLALQGPKAVDVLEAIIPGVTELTFMEGNAFHAFGHSIWISRSGYTG
                     EDGFEISIPAAAAEQLADALTADERVKPIGLGARDSLRLEAGLPLYGHDLDRETTPVM
                     AGLTFAIQKRRRAEGGFPGAPRILSEIENGPIQKRVGFDVEGRQPVREGALVLDGEGN
                     EVGRITSGGFSPSLQRPIAMGYVATDLAEPRTELKLEQRGKLFDGTVAPMPFVPHRYH
                     RKGAA"
     regulatory      complement(3240..3342)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(3409..4047)
                     /locus_tag="VHN55_04115"
     CDS             complement(3409..4047)
                     /locus_tag="VHN55_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019371110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803151.1"
                     /translation="MPVKLRLASTIVLVLLAGCTRSGTIEEGGIYTVRSVCPQVAIPG
                     ATGDITLFDPAGSTASSAIDVAAAITNLRENCQDSGAEVISTATFDVVATRRDASQAR
                     QVLLPYFDTVVQAGDTVVAKRIGQVALSFPAGSFRAQTSAQATARIARSAATLPENVR
                     QILIRPRKESDPDAAVDPLSDPGVRAAVARASFQHLIGFQLTPEQLRYNATR"
     gene            4130..5074
                     /gene="ispH"
                     /locus_tag="VHN55_04120"
                     /gene_synonym="lytB"
     CDS             4130..5074
                     /gene="ispH"
                     /locus_tag="VHN55_04120"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEX2803152.1"
                     /translation="MANRPPLRVLIAAPRGFCAGVDRAIQIVELALERYGAPVYVRHE
                     IVHNRFVVDRLKQLGAIFVDELDEVPDDRPVVFSAHGVPKAVPADARERGLTFVDATC
                     PLVSKVHRQAERLIEDGLHILFIGHSGHPEVIGTLGQVPEGSITLVETVDDALDVAVP
                     DDGRLAFLTQTTLSVDDTAAIVEALKARFPSIRAPRSEDICYATSNRQAAVKAVAPEC
                     DKMLVIGAPNSSNSLRLAEVAERIDVPARLIERASNIDWDWLGQPTTLGITAGASAPE
                     ILVREVIDALRERFDVTEVQADHTPERITFKLPRELVA"
     gene            5075..5521
                     /gene="rnhA"
                     /locus_tag="VHN55_04125"
     CDS             5075..5521
                     /gene="rnhA"
                     /locus_tag="VHN55_04125"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007711713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEX2803153.1"
                     /translation="MAEPPLVEVFTDGACRGNPGPGGWAALLRTGAKEREISGGEPLT
                     TNNRMELVAAIEALNALKKPCRVEIHTDSNYVRDGITKWIHGWQRNGWRTADRKPVKN
                     ADLWQQLLQAEARHSVKWHWVKGHSGHPENDRVDSIACDEADKQRG"
     gene            5584..5970
                     /locus_tag="VHN55_04130"
     CDS             5584..5970
                     /locus_tag="VHN55_04130"
                     /inference="COORDINATES: protein motif:HMM:NF013304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEX2803154.1"
                     /translation="MPVELQLLVWSAVLALIQVTVAAMGAQQQVSLPVLAGNREQMPP
                     LTGWAMRASRAHSNLLESLVVFAVFVLVAYSTGRLNAMTALGANLFFWGRVAYAIVYV
                     AGVPWLRTLIWGVSIAGLLVILSQIL"
     gene            complement(5975..7066)
                     /locus_tag="VHN55_04135"
     CDS             complement(5975..7066)
                     /locus_tag="VHN55_04135"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020817876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2803155.1"
                     /translation="MSEFDVLIVGGGIAGASLGAEIAPTRTVLLIEGESHCGVHSTGR
                     SAAFWLESYGGPVVARLSAASRPLLAQPPEDFSDRGFLRPRGDLHVTRDELPAIPQGI
                     ESRIVERSELERMVPGIRPEWRRALFEPGCADIDVGALHSAYLRRLRIGGGEIRTDAR
                     FESAQYRDGLWRVRLKDGSTVTAAIIVNAAGAWADEVAAAAGVQPLAIAPKRRTMVQL
                     RIGRGGLRDLPLVDDAEGTFYFKGEGDRTVWLSPHDEIDTDPCDAAPEEMDVAIAIDR
                     FQKVVDWPVEAVERKWAGLRSFAPDRNPVYGFDPTARGFFWCAGQGGFGIQTAPAAAK
                     MAASILLGSDPEPAVARIDPAPFAPARFR"
     gene            7120..7590
                     /locus_tag="VHN55_04140"
     CDS             7120..7590
                     /locus_tag="VHN55_04140"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010336255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEX2803156.1"
                     /translation="MNAGFTLGLLALLALILVVAAIVDARTFTISNRLNLAVALLAPL
                     YWWSVALPLWPGIAIQVAVAAGVFVLLALAFYAGMMGGGDVKLAAAVALWFSPGETLR
                     FLVFMSVAGGVLTVIVLVLHRLRSKEGKPEVPYGIAIAVGALAILAQRFLNQFA"
     gene            7635..8642
                     /gene="cpaB"
                     /locus_tag="VHN55_04145"
     CDS             7635..8642
                     /gene="cpaB"
                     /locus_tag="VHN55_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX2803157.1"
                     /translation="MDFKKIVLLVGALMVAAVTAIMAKNMFAGAGATTAAAAPVPQGP
                     KVLVAKKPLTVGTIIDATMVGFEVWPQDSVQPAYYQQGAPDADPSKLFGTVVRYPISA
                     GQPLSRGALVSPQDRGFLAAALGPGMRAVTVPVNASSGLAGFVFPGDRVDLVLSQEVR
                     GGGDGEPLRVSETIVRNLRVLATDQRYTDKDEDGKPVIKAATNVTLEATPRIAEKIAV
                     AQSMGKLSLSLRSIADQSSELSRAVASGDIKVPEGTDPADERRLLSAFANRPIDSNTT
                     YTTGGDVSRFQRRSVPGSAPSASGSAAPGAAPGVAAVPTGPVVRVARGNEISVVPVGA
                     R"
     gene            8644..10113
                     /locus_tag="VHN55_04150"
     CDS             8644..10113
                     /locus_tag="VHN55_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010542613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HEX2803158.1"
                     /translation="MTTVRIMRRARLGTALAALAFAAPAVMAPVAPAAAQGVESSYKP
                     TRQLVLSTGEGQMITVSKNVANVWTSNPEVADVYVNSRRQLNVFGKKSGEATVIATAA
                     DGSVVYGANVRVSQNLSSVDEVLRAAMPGTNITVTPVGQVAVMNGTVSSPEEAAAAQA
                     IVTSLLNPGKKEGDALDIMPINRLRTATPLQVTLKVRIAEVSRDLLKQVGVNLFASDP
                     TNGFKFGINQGAGTIPSEGGPFTVDNILGAGTSIGAAGKLFGLDILSSLDLAETDGLV
                     TTLAEPNLTALSGETASFLAGGEFPIPISQGNESVTVEYKQYGVSLAFTPIVLGNGRI
                     SMRVRPEVSELSDAGSVRLGGFTVPALTTRRAETTVELGSGQSFMLAGLLRNSNTNSV
                     DKAPFLGDLPILGALFRSTKYRRQESELVIVVTPYLVRPVSGRMALPTDGYRAPTDAD
                     RVFLGQTYTGQSGPAPAIVAPAPGVGGTAAASAAPGFKL"
     gene            10137..10775
                     /locus_tag="VHN55_04155"
     CDS             10137..10775
                     /locus_tag="VHN55_04155"
                     /inference="COORDINATES: protein motif:HMM:NF021025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaD family pilus assembly lipoprotein"
                     /protein_id="HEX2803159.1"
                     /translation="MMVRKTIAILLVSAAAACTAPGQDTSARGLSSVHEPVLNRSVFA
                     LDVAAPGGIIPPAELARVDGWFRSLGVGYGDSIFVDGPYAETARAQVAELAGNYGMMV
                     RAAAPVTAGMVAPDMVRVVVSRTRVDVAGCPDWSVPSQPNVLNNSMSNFGCALNSNLA
                     AMVADPEDLVHGREGTGVGDAATATKAVTFYRTTPPTGAEGLQDISTKKDKE"
     gene            10775..12043
                     /locus_tag="VHN55_04160"
     CDS             10775..12043
                     /locus_tag="VHN55_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010336252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein CpaE"
                     /protein_id="HEX2803160.1"
                     /translation="MNAPFQARAGLRDPFTAFVCDDATAEMLRPVAVEHGWSPEKVNK
                     GGLRNAVQSLSVSASPNILFVDLSESADPLNDINGLAEVCEPGTIVIAAGQVNDVRLY
                     RDLVASGIHDYLLKPFTVEQLRDSFAHAQALLSGPRGEAQVDKPHVMSAVIGVRGGVG
                     ASTMATSLAWMLGERAHRATALLDLDVHFGTGALALDLEPGRGLTDAIENPSRIDGLF
                     IERAMVRANERLSVLSAEAPIHQPLITDGSAFFQLQEEMRNAFDSTVMDLPRQMLIQH
                     PHLVHDAHVAVVVAELTLAATRDAIRILAWLKSNAPQTKIIVVANGVPNGGALEISRK
                     DFEQSIERPVDVVFPLDSKLAAQSAKLGKPLAEIATGKTAAPFNSLVNMVLSHATEEG
                     AAGGSDKSGGGSKSLVDNLKSMLAKPKKAA"
     gene            12100..13068
                     /locus_tag="VHN55_04165"
     CDS             12100..13068
                     /locus_tag="VHN55_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX2803161.1"
                     /translation="MIFYLILGIGGLGLLLLLMKMLSGPSASKSVKRRMELVKERHAE
                     GVTAAAQAQIRRLMAARASRFEGFASSIIPRPALLRKRLEMTGKNITLGKYAMISLGL
                     LAVTVALMMLRGAPFFLSLFLGLFVSVGMPHLVVGKMITRRVNKFNSNFPDAIELMVR
                     GLRSGLPISETLGVVAAEIGGPVGVEFRTVADKMKIGRTMEVALQETADRLGTPEFQF
                     FVITLAIQRETGGNLAETLSNLADVLRKRAQMKLKIRAMSSESKASAYIVGSLPFVVF
                     TLVWFINPAYMGGFFTDQRLIVAGLGGLIWMGIGAFIMAKMVNFEI"
     gene            13082..14071
                     /locus_tag="VHN55_04170"
     CDS             13082..14071
                     /locus_tag="VHN55_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX2803162.1"
                     /translation="MQPSGPTLLGFDVIWIATILSGVATLAVIMAIYAATTVKDPMVR
                     RVRALNERREQLKAGIVASTNKRKKLTNRNQAADRVRAILTQFKMLQDDQLEKTQRRL
                     MQAGIRNKELAFFIIFARFVLPVALGFLAVVLIYFVEYWPEWGGFRRYATVAGILVGS
                     YKAPDIWLSNKVKKRSHAIRKGLPDALDLLVICAEAGLTVDAAFGRVSRELGKAYPEL
                     GDEFGLTAIELGFLNERRQAFENLAARVDLEAVRGVVTTMIQTEKYGTPLASALRVLS
                     AEFRNERMMRAEEKAARLPAIMTVPLILFILPTLFVVILGPAACSISDNLLNK"
     gene            14155..14436
                     /locus_tag="VHN55_04175"
     CDS             14155..14436
                     /locus_tag="VHN55_04175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803163.1"
                     /translation="MIGFTSDQWVIVALVFVLGLLVGAFLLAGSGRKWKTRYRDEVRE
                     REALEERQRDREREWDEREKEWRERDSLRAAAIKDRDRDDDGVPDRTEY"
     gene            complement(14443..16512)
                     /gene="glyS"
                     /locus_tag="VHN55_04180"
     CDS             complement(14443..16512)
                     /gene="glyS"
                     /locus_tag="VHN55_04180"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019371091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEX2803164.1"
                     /translation="MGAVSTADFLLELRCEEIPARMQAGARNDLARLFAEALEKAGLS
                     SKAIDVFSTPRRLALIARGLPLQTEPRREEMKGPRTAAPPQALDGFLRKTGLKREHLE
                     ERDGVFFAVIDTPGQPTLDLLGPMIERIVRGFPWPKSMRWGAASQTTDSLRWVRPLHG
                     IVAMLGEDIVPVAINGIEAGATTLGHRFHHPGPITLGGPADYLEKLKACHVIVDQEER
                     ERIIREGAAGAARDAGLSLVEDEGLVVENAGLTEWPVPLLGRFDADYLDVPREVIVLT
                     MRANQKYFACTKDDGGLAPAFVCVANIDANDGGGAIVEGNRRVLAARLADARFFWDQD
                     LRVPLEDQAEKLSGIIFHEKLGTVADKVERVAKLARWLVEERVVEGAKPDQAERAARL
                     AKADLVTGMVGEFPELQGVIGGYLAEAQGEPKAVSNAIRDQYATATEPLSVAVALADR
                     LDSICAFFAIGQKPTGSKDPFALRRAALGSIEMIVSCGLRLPLTKAIRGALANRAGQV
                     KGSEAAHRLDRTAPEVLEFFADRLKVQQREAGVRHDLVDAVFALGGEDDLVRLLARVK
                     ALQDFVETGEGADLLTAFKRAANILKKEKWDPKAVGDGSVEAQEKSLTDALDKAEPKA
                     VKAIEKEDFAAAMAALASLRLPIDEFFDHVTVNADDKAVRARRLNLLARFRDAVNQVA
                     DFSKIEG"
     gene            complement(16500..17360)
                     /locus_tag="VHN55_04185"
     CDS             complement(16500..17360)
                     /locus_tag="VHN55_04185"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEX2803165.1"
                     /translation="MSLSFQDLILTLHRYWGAQGCVLVQPYDLEMGAGTFHPATVLRA
                     LGPDPWKAAFVQPCRRPTDGRYGENPNRLGHYYQYQVILTPSPPDLQDLYLGSLNEIG
                     IDPLKHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVTQFTYFQQVGGFDCKPVSGELT
                     YGLERLAMYIQGVDNVFDLDFNGAGVTYGDVFRENEVELSTWNFEVANTDALFDLFRK
                     AAAECESALKAKLPIPAYEQAIKASHIFNTLQARGVISVAERQAYIGRVRDLAKGACA
                     AWVELNGWEQ"
     gene            17481..18377
                     /locus_tag="VHN55_04190"
     CDS             17481..18377
                     /locus_tag="VHN55_04190"
                     /inference="COORDINATES: protein motif:HMM:NF014066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HEX2803166.1"
                     /translation="MVFKFLKRALALVGIATAAYAAPQAAPAPAAQPALWEVSDPDTT
                     IYLFGTIHLLPAKHHWRTPTIDKAIASSDELIVETIIDQQNPQELIAALTRLGYSSGL
                     PPIEERVDPAKRPLLEAAIAKTPIPRAVFDRMETWAAAFTLLGVQFNAIGLQGEHGVE
                     QTLRDSFRADGKPIGQLETNAEQLGFFDTLPEAAQRALLEGAVETPDEIGAEFAEMLR
                     GWTSGDVDAIANTFNRGLGESPMLREALLKRRNANWSRWIEQRLARPGTTLVAVGAGH
                     LAGESSVQELLESRGYTVRRVQ"
     gene            18674..19480
                     /locus_tag="VHN55_04195"
     CDS             18674..19480
                     /locus_tag="VHN55_04195"
                     /inference="COORDINATES: protein motif:HMM:NF014066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HEX2803167.1"
                     /translation="MAFLPLLIGAAVAATPLPAAPPANPAPHTGHPALWVVNDSDTII
                     YLFGTFHALDGNSEWFGQAVRTAFTASDQLMLETLVPKLPAVAMAPSPYGSGPVAQLA
                     PSASYLATTKVVMNAGRTNGLSTDHGADAILRDAADLTGKPVAGLESFEFQLNMFSSL
                     PSNGQSTAPQDAETIRALGAMLGSLKSAWKRGEVETVFTPLLMQMQLQSPQSYKTMFV
                     ERNTRWAHWIAERLKAPGTVFVAVGAGHLSGPDSVQRKLSSLGVKSARVN"
     gene            19605..20291
                     /locus_tag="VHN55_04200"
     CDS             19605..20291
                     /locus_tag="VHN55_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEX2803168.1"
                     /translation="MSEQLTLPAEARERAGKGASRALRRDGRVPAVIYGEKQEPLAVH
                     VEEKLLTKMLSTGHFTNSVIMVEVGGKPNRTLPKDVQFHPVTSRPIHVDFLRIGEHAQ
                     VHVNVPARFIDEEQSPGLKRGGVLNVVRHDLELVCDAAKIPDEIVISLAGLDIGDAIH
                     ISHVTLPEGSKSAIEDRDFTVATVVAPSAMKAEAEEEEAAPAADEVPAMEQEGEGLEE
                     DKEQGTPDQE"
     gene            20371..20952
                     /gene="pth"
                     /locus_tag="VHN55_04205"
     CDS             20371..20952
                     /gene="pth"
                     /locus_tag="VHN55_04205"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010403812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEX2803169.1"
                     /translation="MQIWAGLGNPGAQYALQRHNVGFMAADVIADAHAFGPWTKKFRS
                     LVADGRIGGHRILLLKPQTFMNHSGDAVQQALSFYKLDLDSLTVFHDELDLAPMKVKV
                     KLGGGTAGHNGLRSIDSHLGAEFRRVRIGIGHPGPGQKEKVTPHVLGNYAKSEMAVLP
                     DLLAAIADEAEWLASGDDARFMSEVALRMQQAE"
     gene            complement(20930..22708)
                     /locus_tag="VHN55_04210"
     CDS             complement(20930..22708)
                     /locus_tag="VHN55_04210"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HEX2803170.1"
                     /translation="MSDVFVSYARSTEEQAMKVEAALRDAGYGVWRDAELPAHRAYAE
                     VIQERLNASKAVVVLWSEEAAKSHWVRAEADSARESGTLVQASVDGAIPPIPFNQIQC
                     AGLKGWDGERDHDGWQKLIASVSSLLDSAAEPLQPTRGKRQKTSICVLPFANMSGDAE
                     QEYFSDGISEDITTDLSKVSSLEVTARNTAFTFKGRSVDVCDVARKLGVTHVLEGSVR
                     KSGNRVRITAQLIDGAGGGHVWADRFDRDLTDIFEIQDEISKSIVEALKVKLLPSEKK
                     AIEQRGTTNVEAYKLYLLARQYWTTGNYGDPRREERVMRICSRAVEIDPYYAQAWALL
                     GYAQSNLHYNFGLGSDDGFAAAHTALAIDPNIAEAYLPMVRRLDEQGRHEEAQAEIVK
                     ALKLAPDSWEVNKEAAHLRRLRGDHEGAKAHYERAVQIMESDFHAWAVLSGFYRQNER
                     EKLLHAGRMMVSEAEKALQHDPSNGAALGIISGGYAVLGERERAREWIERAMLIDPDN
                     ANMKYNFACVLAAHLDDKEGALKLLDRTLDAASAVHVRMVETDPDFDSLRDDPRFRKM
                     VERHRKRLGINVAAEATVAAIPPAAS"
     gene            22778..23344
                     /locus_tag="VHN55_04215"
     CDS             22778..23344
                     /locus_tag="VHN55_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02466 family protein"
                     /protein_id="HEX2803171.1"
                     /translation="MNRQLFPTQLYEGDVEPELLPELAYSIRSLASDDAAGRRWSDEH
                     RYPGYTSYASLNDLPKRDPAFSELGKVLTKEARGFARDLGWDCKPKLDSLWVNLLRTE
                     GHHSGHIHPHSILSGTLYVEVPAGSGAIRFEDPRLPLMMAAPSRDGTFVEVQPRPGLL
                     LLWESWLRHEVLPGTGKAERLSISFNFA"
     gene            23387..24487
                     /gene="ychF"
                     /locus_tag="VHN55_04220"
     CDS             23387..24487
                     /gene="ychF"
                     /locus_tag="VHN55_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004207317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEX2803172.1"
                     /translation="MGFRCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGR
                     VAVPDPRLDKIREIAGSAQEIETQIEFVDIAGLVRGASKGEGLGNQFLANIREVDAIV
                     HVLRCFESGDVTHVEGRVDPVADADVVETELMLADLESLERRVPNLVKKAQQGDKDAK
                     IEASVLGQALELLRASRPARLTEPKDAEEGKALARAQLLTAKPVLYVCNVDEADAATG
                     NALSQMVAAKAESEGAVSVVITAAIEAEIATLPEDEREAFLSDLGLHETGLNRMIHAA
                     YQLLGLITFYTAGPKEARAWTVHKGAKAPEAAGEIHSDFERGFIRAETIAYDDFIECG
                     GEAGAKDAGKMRSEGKDYVVQDGDVLLFRFNV"
     gene            complement(24477..25103)
                     /locus_tag="VHN55_04225"
     CDS             complement(24477..25103)
                     /locus_tag="VHN55_04225"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX2803173.1"
                     /translation="MAEPSNAPAKLRVAIAAALLTSLWFAMMTVGTGPADGAILHALY
                     VGENASLVAVARGFTLIGDWRVVIALSVVAGAWLLVARGWRQAVAVLLVTLVGRGLVT
                     AQKYGIERLRPEDQEHLVHVSTPSFPSGHSAGATIVYLALALVLTVGTRWKWPAMAAA
                     LLVAFGVGVSRIMLGVHWPTDVIGGWAFGLLWVMVALPWAERLAQPRR"
     gene            complement(25153..27771)
                     /locus_tag="VHN55_04230"
     CDS             complement(25153..27771)
                     /locus_tag="VHN55_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2803174.1"
                     /translation="MIDRKLRMIALGLLASTAISAPAVAQDQVEPPVDTTDSPAPNTN
                     ATDVTSQPPQVQVAQDGEVADHNEVLVTAQKREENLQDVPLSIQAIGTRRLDQLNISD
                     FADYTKQLPSVSWNTSQSGGAVVYMRGVATGGDGNHSGSFPSVGVYLDEQPVTTIGGA
                     LDVHIYDIARIESLAGPQGTLYGASSEAGTIRIITNKPDLTATYGRVDAELNTVAHGG
                     QGGSLEGMLNVPIAENIGFRGVAFYQRDAGFIDNVPGTRTYCGTAITDEDDETIGCVR
                     DGFSVDNNAFVEDDFNGRRVYGGRAALKIDLDENWTITPTIMHQNMKQDGFYAVDPTL
                     GDLEIQRFRGDEVIRDKFTQAALTIEGKLFNFDVTYAGAYMDRPTSSVLDYTDYTDAY
                     DAAYESLGGLANYFYYEDSDGNDINPLQYIIGTEHFKKMSHELRIATPQDRPFRLLAG
                     AFYQRQTNHIYQNYKIDGLAPELSVNGYPGTIWLTLEDRKDKDWALFGEASFDVTPQV
                     TITAGGRLYRFDNSLFGFAGFGKNPAFGEADGAGFPPPPNGAGGSSGVRRCLTVNGEQ
                     LLDDEGAEFASGSIAGIPCTNVGTVVNGVAEPLHRKGSGFLHRLNASYKPNERMMFYA
                     TWSRGFRPGGLNRQPGEPPYDPDFLTNYELGWKTEFGPLRWNGAVYHQRWKKFQFSFL
                     GANSLTVIHNGRDAHINGAETELSYVAGGLTLNGSAAYTDAKTKGNICEVSTDDEQCS
                     ATFIVTPSGTRLPITPKFKAAATARYSWPISIGKAHVQASVTHRSSAAVDLRQDLDGD
                     GTNPNDYLGRIRSSTLVDLFAGFDWANYSAELFVSNLFDQRNELTRFVACSACTQTRI
                     VPGRPRTIGIRLGAHF"
     gene            complement(27851..29626)
                     /locus_tag="VHN55_04235"
                     /pseudo
     CDS             complement(27851..29626)
                     /locus_tag="VHN55_04235"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
     gene            29513..29968
                     /locus_tag="VHN55_04240"
     CDS             29513..29968
                     /locus_tag="VHN55_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX2803175.1"
                     /translation="MIYFEDLEVGAETYFGSYEVTREEVLEFARKYDPQPFHLSDEEA
                     AKTHFGRIAASGWHTCAMTMAVIARYVVGDEQAGLGSPGVDELRWLKPVYPGDTLHVR
                     GKIVETRPSRSKPEIGSFRTETTVTNQDEVPVMRFTSIVLMRRRPQPGG"
     gene            complement(29980..31584)
                     /locus_tag="VHN55_04245"
     CDS             complement(29980..31584)
                     /locus_tag="VHN55_04245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX2803176.1"
                     /translation="MLRFRWVCVASVALAALAAPAAGASSEIDRIIDEGLSHSQAMRN
                     ASELMDGIGPRLTNSENFDRAADWALGKFRQYGLENVHREPYQFGLGWNLDSWSAQMV
                     EPRGIVMRSMPVGWSPPTNGPLTAPVILAPMSKKEHFDKWRGKLAGKIVMVSLPGAPR
                     QWSTSPFRRYEDSDIAKLDEYELPKDELRTYKEFVKGDKFPLELSRFLKAEGAVGMVR
                     KSYRDWGLVSGEGYLIEPGKTLALPFMELGAEDYRRLARLETDGRPPVISFTIAARFN
                     ERDLTADNLVADIRGSDPNAGYVMAGGHFDSWIAADGATDDGVPSVIVIEAARIIKSL
                     GVRPKRTIRFALWSGEEQAIMGSTAYIEQHLAHRPVDPGLGPLDYFAEWPGAFPIEKK
                     PGYDQLKAYFNLDNGAGKIRGIYAENNIAAIPLLKKWLSPFDSMGASAVVTSKTGGTD
                     HEYMQAVGLPGFQFIQDPLDYGGVTHHSSVDTLDHAPPDDVRQAATILAAMLWQAANS
                     DEVLPRPPLPTAPSKSDPFKVEDPDK"
     gene            complement(31679..32179)
                     /locus_tag="VHN55_04250"
     CDS             complement(31679..32179)
                     /locus_tag="VHN55_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010217842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803177.1"
                     /translation="MRARLVLLLAGSAALGGCATGYGYGGYGGYGGYGGYGSGVSIGV
                     STGYGGYGGYYDPYYGGYGSYGTYGSYGAPYYGWYDNYYYPGTGYYVYDSYRRPHRWT
                     DRQRRYWTSRRDRDGHHSGTRERRENRENWSGFDRRDRNDRNDRDRSRRDRNRDRDDD
                     QRSNRR"
     gene            complement(32294..33217)
                     /locus_tag="VHN55_04255"
     CDS             complement(32294..33217)
                     /locus_tag="VHN55_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007012749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEX2803178.1"
                     /translation="MIRWLLGFIGAAFSVVLLWSLFSGLSTHFSDPPEPTAEEEFHKH
                     PKPLHLASDGPLGHFDRQQLQRGFQVYKEVCAACHGLSHVAFYDLEGLGYSEAEVKAI
                     ASQWQIEVPSINPETGEAATRPALASDRFPSPYPNEVAARAANNNALPPDLSLITKAR
                     EGGAAYIHSLLTGYQNQPAELVHKFPAAKTPEGLYFNPYFANLNIAMPPPLTSEGQVQ
                     YADGTPPTVDQMATDVAAFLVWAAEPKLENRHAAGIAVVVFLLFATILGHLAYRNVWA
                     EAKRKVRVTGAIEPENKAKRRRANRKAGVSD"
     gene            complement(33214..34536)
                     /locus_tag="VHN55_04260"
     CDS             complement(33214..34536)
                     /locus_tag="VHN55_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017664875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEX2803179.1"
                     /translation="MSFSWAKAYEPKNPFMRWLDERLPLPRLVYGAVGGGYPVPRNLN
                     YWWNFGVLAGLFLTIQIVTGIVLAMWYYATGDGAFNSVEHIMRDVNAGWLLRYTHANG
                     ASFFFIVTYIHIFRGLYYGSYKAPRELVWILGLVIYLLMMATAFMGYVLPWGQMSYWG
                     AQVITGFFGAIPLIGEPLRVWLLGGYAPDQAALTRFFSLHYLLPFVIAAVVVLHIWAL
                     HIPGSSNPTGVDVKDEKDTLPFHPFYTAKDGWFAGGVLLVFALVVFFAPNALGHPDNY
                     IPANPLATPAHIVPEWYFWPFYAILRAFTTDFILPAKLWGVLAMFASILLLFFLPWID
                     KSPVRSGNYRPLFRTFFWILVADVLILGWAGGQPATALPVAIGQITSAYYFAHFLIIL
                     PLISKFETPLPLPRSITDSVLHGEKQESAPAGVEPGTTTIAGEGSSRK"
     gene            complement(34554..35102)
                     /gene="petA"
                     /locus_tag="VHN55_04265"
     CDS             complement(34554..35102)
                     /gene="petA"
                     /locus_tag="VHN55_04265"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007012747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX2803180.1"
                     /translation="MADVSVTAGDGVRRRDFLNVAAVSFAGVGAVAAIAPLLVQMSPP
                     ADVLALSTVEVDISKIQPGQGIKTVWRKQPVFVRNLTPKEIQEANAVPMSELRDPQTL
                     AQRTKPGKANWLITLGVCTHLGCVPLGIGEGENKGPFGGYFCPCHGSAYDTAARIRSG
                     PAPSNLFVPDYEFTSPTTVRIG"
     gene            35273..36139
                     /gene="hemF"
                     /locus_tag="VHN55_04270"
     CDS             35273..36139
                     /gene="hemF"
                     /locus_tag="VHN55_04270"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HEX2803181.1"
                     /translation="MLSLDQQQQSAKDWFESLRDRICAAFEEIEREAGSDSAFVRTPW
                     DREDESGASGGGGVRAQMNGSVFEKVGVNVSTVGGRFSPEFAKTILGADEADPRFFAT
                     GISLVAHMANPHVPAVHMNTRFLATTKRWFGGGADLNPAIPCQEDTDAFHARLRAACA
                     AHDPTFYPRFSKWADEYFFLPHRGVSRGVGGIFYDHLECREPGEGATFDQNFAFTRDV
                     GEAFLDIFPKIIRKRMGTKFSEADMERLLEFRGRYVEFNLLYDRGTLFGLKTGGNIDA
                     ILMSLPPLAKWS"
     gene            complement(36136..37968)
                     /locus_tag="VHN55_04275"
     CDS             complement(36136..37968)
                     /locus_tag="VHN55_04275"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX2803182.1"
                     /translation="MARTDSRLSGTLPFLLYALIVLGHLFLCRLIIAYQAQPPPEQLT
                     AQTVLAAIGHLGSDALAVSIVALLTLAIARGSAAAAATFMALAAGYLMLTGAINVGVM
                     RVYNQPATINLLSYGDFLNLSGLASLTKYMTRADRLVLGLAMVLTASFALLPAVRRWR
                     SLGGPAVAWAVVLAALPALVALPLHALLYGDGDSRGRNANAGWRLAMSAIAPPSGRAV
                     QVSDPDLLDPFETYALKSVISPPAIREAHIRNVLVVVLESVGTDYLDSAAAPNLNRLK
                     ANAAYFPNTFAPMASSPMSLFSLMAGMYPPVSPRAIPMVEPEFPATTLLESLGSSGRR
                     TAVFSANWGFMDFPRYLKGRAGHLEEIPDDRQCEDCSFASLRHWITQSGQPFAALLWT
                     YRTHYPYGADPSRIAGNPKLAVSRYIAGIRETDRQVGELVAWLEQNGRLDDTLVVIVG
                     DHGEAFLQHGTQSHGNDVYRETVRVPLMLVNKRMFSGVVDPSPVRLIDVAPTLLSLAR
                     VPAPETFQGLDLTKPLRPRRVFFAAAWLHLVMGFQEGRMKYNYYYVTDQLQAFDIVRD
                     PNETVDIADRLAPAERAAVVHRIMNWKAAVDSKTEAVRSAPRRR"
BASE COUNT         6699 a        12402 c        12137 g         6808 t
ORIGIN      
        1 tgcccctcgc ccacgacgat gtcggcgccc atttcgcccg ggctcctgat cagccccagg
       61 gcgaccggct cggtcaccac cgcgatcagc agcgcgccct tggcatgggc tgcctcggca
      121 atcggcgaca ggtcggcgat ccggccgagg atgtcgggat attggacgac caccgcgctg
      181 gtctcgtcgt cgatcgccga gatcagccga tcggcgtcgg tgtcggcgga aagctgcggg
      241 gtcgatgttt cgagcgtgtc gccggtgaag cgcgccattg tcgtacagac gctgacgtaa
      301 tgcggatgaa gcccggtgga gaggatcgcc tttttccggc gcgtgatccg cgcggccatc
      361 agcaccgctt cccagcaggc ggtggatccg tcgtacatcg acgcgttggc gatgtcgcag
      421 ccgtagaggc gcgccacctg ggtctggaat tcgaacagga cctgcagcgt gcgctgtgcg
      481 atttcgggct ggtaaggcgt gtagcttgtc aggaactcgc cgcgctggat gatatggtcg
      541 acgctcgccg ggacgtgatg acggtaggcg ccgcaaccga ggaagaaggg cacgtccccc
      601 gcgaccatgt tctttgccgc catcgcgttc atctgccgct cgacggaaag ctccgaagcg
      661 tgcagcgtca gcccctcgat cagcccgtcg agccgcgcct cttgcggaac atcgacgaac
      721 aggtcgtcga tggaactggc accgacagcc gccagcatct ggctgcggtc ggaatcgctg
      781 agcggcaggt aacgcattca ggaaggcttt ctcataatga agcggagtcg tacgtaatcg
      841 gcggtgttgg acgcgagacg gtcagcgacg gcggcaccga tttctgtgcg ctcgtcgtcc
      901 gggacgccgg cccggtcgag ccagccgcgg cggaaagtgg ttacccacgc agcgatgccg
      961 tgctggatcg gagtgggccg gtcgatcagc cgcgcatcga tctgggtaaa gccggcggcc
     1021 tcgtagatgt cggcgaagtc ctcggccgac gcataccagt tggccgcttc ggacggcggc
     1081 gcatagccgc ggatgaccag ctcttcgtcg agcgcctcgc gcagtcgcgc gagattgccc
     1141 tcgcccccca tttcacccgc gaagcggccg ccgagacgga gcgcgttgaa aatcgccttg
     1201 gccacgcgat acctgtccag catccagtga agcgaggcgt tggagaaagc cgcgtcgaat
     1261 tcgcggtcaa acgccatttc ggcggcgtcc atgacctcgg cgaatacgcc gttggctcgt
     1321 gccgcctcga ccatctcggg cgaattgtcg atgccgacga cctccgcgcc gcggtcgatt
     1381 atcttgagcg acaaggagcc gtccccgcaa cccacgtcta ggacccgctc gcccggtttg
     1441 gggtcgagca agtcgagcgc ggcctcgccc agctcggcga cgaagccgcc gacgcgggca
     1501 tagtccgctg ctacccagcg gctggtcgag gcggcaatct gggtcagagg gtcttcaccc
     1561 agtcgcgata ggcagcttcg tccatcagcc cgtcgagctc gctggtgtcg gaaagcttga
     1621 tcttgaagaa ccagccgccg gcctcggcat cgctgttcac cagcgccggg tcgtcgacaa
     1681 ttgcttggtt gccctctgtc acttcgcccg acaccggcga atagacgtcg gaggcagcct
     1741 tcaccgattc gacaaccgcg gcctcctgtc ccttggccag cttcttgccg gcttcgggaa
     1801 cctcggtgaa gacgatgtcg ccgagcgctt cctgcgcgtg gtcggtgatc ccgaccgtcg
     1861 cggtgtctcc gtcgacttgg atccactcgt gctcgcgggt gaaataggtc gtcatcttaa
     1921 gcagctccct tgcgatgata gcggtggggg acgaacggca tcggcgctac cgtgccgtcg
     1981 aacagcttgc cgcgctgctc gagcttgagc tcggtgcggg gctcggcaag atcggtcgcg
     2041 acatagccca ttgcgatcgg ccgctgcagc gaaggcgaga agccgccgct ggtgatccgg
     2101 ccgacctcat tgccctcgcc atcgagcacc agcgcgccct ctcggaccgg ctggcgccct
     2161 tcgacgtcga agccgactcg tttctggatc ggcccgtttt cgatttccga gaggatccgc
     2221 ggcgctcccg ggaacccgcc ctcggcgcgc cggcgcttct ggatcgcgaa agtcagccct
     2281 gccattaccg gagtcgtctc ccggtcgagg tcgtggccgt aaagcggcag tcccgcttca
     2341 agccgcagcg aatcgcgagc gccgagcccg atcggcttga ctcgctcgtc ggccgtgagc
     2401 gcgtcggcaa gctgctcggc ggcggccgct ggaatcgaaa tctcgaaacc gtcctcgccg
     2461 gtatagccgg atcggctgat ccagatgctg tgtccgaagg cgtggaaagc gttgccttcc
     2521 atgaacgtaa gttcggtgac gccgggtatg atcgcttcga gcacgtcgac cgccttgggt
     2581 ccttgcaacg ctagcaacgc ctggccggtc atgtggtcga ggtagatagt gtcgggcagc
     2641 gcctgccgca tgacttcgat gtcgccatgc ttggtggcgc cgttgacgac gaggtagaat
     2701 tcctcgccgc gccgggtcgc catcaaatcg tcgatgatcc cgccgctgtc gtcgaggagc
     2761 atcgagtagc gcaacttacg gccggcaagc cccttgagtt cgcccggaag cagcgtttcc
     2821 agcgccgtgt ccacgtcggg cccgtggata agcagctggc ccatgtggct gacgtcgaac
     2881 agcccggcgt tctcgcgcgt ccagagatgc tcggccatga tcccttcgaa ctggacgggc
     2941 atccagtagc cggcgaactc gaccatccgg ccgccgcggg cgcgatgcca tccatccagc
     3001 gcaagcggca gcggttcggg cgccggctcg ccttcgggtg caccggtata gggcgttccc
     3061 cgcgcctcgt ggtgctggtc ggtcgggccg ttgtggactt ctcggctcat gtctcgcctc
     3121 cgcgacagtt tggcaacgcg gcaggccgcc gtttcgcctc acccccgtct gtcgctgcgc
     3181 ctgagagctt tgccccttcg gcggctccgg cccgaagacc gaggcacttt ccagactgtc
     3241 aggcgcgcgc ggtccgtctt gcctgagaga ttccgggggc ggttgctcct tcggcgccgc
     3301 caaatgcctg aaacacttgg cgaactctcc cgtgcggcct tccggcgaac aggccgccgg
     3361 tgacgcccgc agccttggct gcgcgcaagc cccaagtcaa cgctgagctt agcgggtcgc
     3421 gttgtagcga agctgttccg gcgtcagctg gaaaccgatg aggtgctgaa agctcgcccg
     3481 cgcgaccgcc gcccggactc cggggtcgct cagcggatcg accgccgcgt cgggatcgct
     3541 ctccttgcgc ggccgaatca ggatctgtcg gacattttcg ggaagagttg ccgcggaccg
     3601 cgcgatccgc gccgtcgcct gcgcggaagt ctgggcgcgg aagctgccgg ccgggaagct
     3661 cagggcgacc tggccgatgc gcttcgcaac cacggtgtcg ccagcctgga ccaccgtatc
     3721 gaaataggga agcaggacct gccgtgcctg ggacgcatcg cggcgggtcg cgacgacgtc
     3781 gaacgtcgcc gtcgaaatca cttcagctcc gctgtcctgg caattctcgc gaagattggt
     3841 gattgctgcc gcgacgtcga tcgccgagga agcggtgctt ccggccggat cgaacaaggt
     3901 gatgtcgcca gttgcaccgg ggatcgcgac ctgcgggcag acgctgcgca cggtgtagat
     3961 cccgccttcc tcgatagtgc cgctccgggt gcagccggcg agcaggacga gaacgatagt
     4021 cgaggcgagg cgaagcttca caggcatttc cttgggcggt cgcagggacg acagctgtca
     4081 taggaagcgc ctttcattgc tgcaagcgag cgcttacatc gccgcggcaa tggccaaccg
     4141 ccctcccctt cgagtcctga tcgccgcccc gcgcggcttt tgcgctggag tcgaccgcgc
     4201 gatccagatc gtcgagctcg ctctcgaacg gtacggtgcg cccgtctacg ttcgccacga
     4261 aatcgtccac aatcgctttg tcgtcgatcg tctgaagcag cttggtgcga tcttcgtcga
     4321 tgagctcgac gaggttccag acgaccgccc ggtcgtattt tcggcccatg gcgtcccgaa
     4381 agcggtcccg gcggacgcca gggagcgcgg cctcacgttc gtcgacgcaa cctgcccgct
     4441 ggtctccaag gtccatcgcc aggcggaacg gctgatcgag gacggtctcc acatcctctt
     4501 catcggccat tccggacatc ccgaagtcat cggtacactg ggccaggtcc cggaaggatc
     4561 gatcaccctc gtcgaaaccg tcgacgatgc tctagacgtc gctgtccccg atgacggacg
     4621 gctggcgttc ctgacgcaga cgacattgtc cgtcgacgac acggcggcca tcgtcgaggc
     4681 tctgaaggcg cgcttcccgt cgatccgggc gccgcgcagc gaagacatct gctacgcgac
     4741 ctcgaaccgc caggccgcgg tcaaggccgt tgccccggaa tgcgacaaga tgctggtgat
     4801 cggcgccccc aacagcagca attcgctccg gctcgccgag gtcgccgagc ggatcgacgt
     4861 gcccgcgcgg ctgatcgagc gggcttccaa catcgactgg gactggcttg gccagcccac
     4921 gacgcttggc atcacggccg gcgcgtcggc gcccgaaatc ctcgtccgcg aagtcatcga
     4981 cgcgcttcgg gagcgcttcg atgtgaccga agtgcaggcc gatcacacgc cggagcggat
     5041 caccttcaag cttccgcgcg aactcgtcgc ctgaatggcc gaaccaccgc tcgtcgaagt
     5101 cttcaccgat ggcgcgtgcc ggggaaatcc gggacccggc ggctgggcgg cgctgctccg
     5161 gacgggggcg aaggagcgcg aaatcagcgg tggcgagccc cttacgacca acaacaggat
     5221 ggagctggtc gcggcgatcg aggcgctcaa tgcgctcaag aaaccgtgcc gggtcgagat
     5281 ccacaccgac agcaattacg tgcgcgacgg gatcaccaaa tggatccatg gctggcagag
     5341 gaacggctgg cgaaccgcgg acaggaagcc ggtgaagaac gcggacctgt ggcagcaatt
     5401 gctgcaagcc gaggcgcgcc actcggtgaa gtggcactgg gtcaagggcc acagcggcca
     5461 tccggagaac gaccgggtcg actcgatcgc ctgcgacgag gcggacaagc agcgcggcta
     5521 ggcggttcaa tttcgcggca accctgatag gatcgcctcc gggaacaaat ggggggagat
     5581 ccaatgcctg tagagcttca gcttcttgtc tggtcggcgg tacttgcgct gatccaggtg
     5641 acggtcgctg caatgggcgc ccagcagcag gtgagcctac ctgtgcttgc cgggaaccgc
     5701 gaacagatgc cgccgctcac gggctgggcg atgcgagcca gccgggcgca ttccaacttg
     5761 ctcgaaagcc tggttgtgtt cgcggtgttc gttctcgtcg cctactcgac cgggcgcttg
     5821 aacgcgatga ctgcgctcgg cgccaacctg ttcttctggg gccgcgttgc ttacgcgatc
     5881 gtctatgtgg ccggcgttcc ctggcttcgc accctgatct ggggcgtgtc gattgcaggc
     5941 ctgcttgtga tcctttcgca gatattgtga tcgcctagcg aaatcgcgcc ggcgcgaacg
     6001 gcgccggatc gatccgtgca acagccggct cggggtcgga gccaagaagg atcgaggccg
     6061 ccattttcgc cgccgccggc gcggtttgaa ttccgaagcc gccctgcccc gcgcaccaga
     6121 aaaagccgcg ggccgtcggg tcgaacccgt aaaccggatt gcggtcgggg gcgaagctac
     6181 gtagccctgc ccacttccgt tcgacggctt cgaccggcca gtcgaccacc ttctggaatc
     6241 ggtcgatggc gatcgcgaca tccatttcct ccggagcagc gtcgcacggg tcggtgtcga
     6301 tttcgtcgtg cgggctaagc cagacggtcc ggtcgccttc tcccttgaaa taaaaagtgc
     6361 cctccgcatc gtcgaccagc ggcaggtcgc gaaggccgcc cctgccgatc cgcaactgca
     6421 ccatcgtccg ccgcttcgga gcaatggcga gcggctgcac accggctgcg gcggcaacct
     6481 catcggccca cgctccggca gcattgacga ttatcgctgc cgtcaccgtg gagccgtctt
     6541 tgagccgcac ccgccacagc ccgtcgcgat attgggccga ttcgaatcgg gcgtcggtac
     6601 gaatttcgcc gccgccgatg cgcagtcggc ggaggtaggc ggaatgcaaa gcgccgacat
     6661 cgatgtccgc gcagcccggc tcgaacagcg cgcgtctcca ctcgggacgg attccgggca
     6721 ccatccgttc gagctcggag cgctcgacga ttcgcgattc gatcccctgc ggtatggccg
     6781 gcagctcgtc gcgggtgaca tgaagatctc cgcgcggacg cagaaatcct cgatcggaga
     6841 aatcctccgg aggctgggca agcaacgggc gcgaggcggc gctcaaccgg gcgacgaccg
     6901 ggccgccgta gctctccagc cagaacgccg ccgaccggcc ggtggagtgg actccgcagt
     6961 ggctctcgcc ctcgatcaga agcaccgtgc gagtcggcgc gatctctgcg ccaaggctgg
     7021 caccggcgat tccgccgccg acgatcagga catcgaattc gctcacagca gccgttggtt
     7081 acggtttcga aagccgggcc gtctacctgc actgtcatga tgaacgctgg attcaccctg
     7141 ggtttgcttg cgctgcttgc gctgatcctc gtcgttgcgg cgatcgttga cgcgcgcacg
     7201 ttcacgatct cgaatcggct gaacctggca gtcgcgctgc tagcgccgct ctactggtgg
     7261 tcggtggccc ttccgctgtg gccgggaatc gcgattcagg tcgcggtcgc ggccggagtg
     7321 ttcgttctgc tcgcgctcgc cttctacgcg ggcatgatgg gcggcggcga cgtcaagctc
     7381 gcggcggccg tggcgctgtg gttctcgccc ggcgaaacgc tccgattcct ggtcttcatg
     7441 tcggtcgccg gcggggtgct gacggtgatc gtgctggttc tccacaggct tcgttcgaag
     7501 gaaggaaagc cggaggtccc gtacggaatt gcgatcgccg tcggcgctct cgcgattctc
     7561 gcccaacggt ttcttaacca atttgcctga tgtctagggc cattcaaggg ggcccgtagg
     7621 ggagcgtttt cgccatggac tttaagaaga tcgtgcttct cgtcggagcg ctcatggtcg
     7681 cggcagtgac cgccatcatg gccaagaaca tgtttgccgg tgcgggcgca acaaccgccg
     7741 cagcagcacc ggtaccgcaa gggccaaagg tgctcgtcgc gaaaaagccc ctcacagtgg
     7801 gaaccatcat cgacgcgacg atggtcggct ttgaagtgtg gccgcaggat tcggtccagc
     7861 cggcttatta ccagcagggt gccccggacg ccgatccgag caagctgttc ggtaccgtcg
     7921 ttcgatatcc gatttccgca ggccagccgc tcagccgcgg cgccttggtc agtccgcagg
     7981 atcgcggctt cctcgccgct gcgcttgggc cgggcatgcg tgcagtcacg gttccggtca
     8041 acgcctcgag cggcctcgcc ggcttcgttt tcccgggcga ccgggtcgac ttggtgctta
     8101 gccaggaagt ccggggcggc ggcgacggag aaccgctgcg tgtctccgag acgatcgtcc
     8161 gcaacctgcg ggtgctcgcc accgaccagc gctacaccga caaggacgag gacggaaagc
     8221 cggtcatcaa ggccgcgacg aacgtcactc tcgaagccac gccgcgcatc gccgagaaga
     8281 tcgccgtcgc gcagtcgatg ggcaagttgt cgctgtcgct ccgctccatt gccgaccagt
     8341 cgtcggagct ttcgcgggcc gttgcctcgg gcgatatcaa agtccccgag ggcaccgatc
     8401 ccgcggacga gcgccgtctt ctgagcgcct ttgccaaccg tccgatcgac agcaacacga
     8461 cctatacgac gggtggtgac gtgtcgcgct tccagcgccg ttccgtcccc ggctcggctc
     8521 cgtccgcttc gggctcggcc gcgccgggcg ccgcaccggg cgtggccgca gtcccgaccg
     8581 gtccggtcgt gcgcgtcgct cgcggcaatg aaatttccgt cgtccccgtg ggagctcgct
     8641 aaaatgacca cagttcgaat catgcgccga gcccggctcg gtaccgccct cgccgccctc
     8701 gcctttgccg ctcccgcggt aatggcaccg gtggccccgg cggccgccca gggcgtcgag
     8761 tccagctaca agccgacccg acagctggtg ctgtcgaccg gcgagggcca gatgattacg
     8821 gtttcgaaga acgtcgccaa cgtgtggacg tcgaacccgg aggtcgcgga cgtctacgta
     8881 aactcgcgcc gccagctcaa cgtcttcggc aagaagagcg gtgaagcaac ggtgatcgcg
     8941 acggcggcgg acgggtccgt tgtctacgga gcgaacgttc gggttagcca gaacctcagt
     9001 tccgttgacg aggtccttcg cgcggcaatg ccaggcacca acatcaccgt cacgcccgtc
     9061 ggtcaggtcg cggtcatgaa cgggaccgtc agctcgcccg aagaggctgc cgctgcgcag
     9121 gcgatcgtca cctcgcttct caatcccggc aagaaagagg gcgacgctct cgacatcatg
     9181 ccgatcaacc ggctgcgcac ggctactccc ctccaggtca ccctgaaggt ccggattgcc
     9241 gaggtcagcc gcgaccttct caagcaggtc ggcgtcaatc tcttcgccag cgatccgacg
     9301 aacggcttca agttcgggat caaccagggc gcaggaacca ttccctcgga agggggaccc
     9361 ttcaccgttg acaatatcct cggtgcgggc acctcgatcg gcgctgccgg aaagctgttc
     9421 gggctcgata tcctgagctc gctcgacctc gccgaaaccg atggcctggt gacgaccctt
     9481 gccgagccga acctaacagc gctttcgggc gagacggcga gcttccttgc cggcggtgag
     9541 ttcccgatcc cgatttcgca gggcaacgag tccgttaccg tcgaatataa gcaatatggc
     9601 gtctcgctcg ccttcactcc gatcgttctc ggcaacggcc gcatttcgat gcgcgtccgg
     9661 ccggaggtca gcgagctgtc ggatgccggc tcggtgcggc tgggcgggtt caccgtccct
     9721 gctctcacca cccggcgcgc cgaaacgacg gtcgagctgg gatcgggcca gagcttcatg
     9781 ctcgccggcc tgcttcgcaa ctcgaacacc aacagcgtcg acaaggcgcc cttcctgggt
     9841 gaccttccga tcctcggagc gcttttccgc tcgacgaagt accggcgcca ggaaagcgag
     9901 ctggtgatcg tcgtgacccc gtacctcgtg cggccggtca gcgggcgcat ggcactgccg
     9961 actgacggct accgagcgcc caccgacgcc gaccgcgtct tcctgggaca gacctacacc
    10021 ggccagagcg gcccggcacc ggccattgtg gcaccggcac ctggcgtggg cgggaccgcg
    10081 gcggcctccg ctgctcccgg cttcaagctg tgaatcgggc gattggaaag gatttgatga
    10141 tggtcaggaa aacaatcgcc attctgctgg tctccgcggc tgcagcgtgc acggcacccg
    10201 gacaggacac gtccgcacgg ggattgtcgt cggtccacga gccggtgctt aaccgctccg
    10261 tcttcgctct cgacgttgcc gctcccgggg ggatcatccc gcccgccgag ctcgctcggg
    10321 tcgacggatg gttccgcagc ctcggcgtcg gatacgggga ttcgatcttc gtcgatggcc
    10381 cttatgccga gactgcccgc gcgcaggtcg ctgaactcgc cgggaattac ggcatgatgg
    10441 tccgcgcggc agcgccggtg accgccggaa tggtcgctcc cgatatggtt cgggtggtgg
    10501 ttagccgcac ccgcgtcgat gtcgcgggct gccccgactg gtcggttccg tcacagccga
    10561 acgttctgaa caacagcatg tcgaacttcg gctgtgcgct aaactcgaat ttggcggcga
    10621 tggtcgccga tcccgaggat ctcgttcacg gccgcgaggg cactggagtc ggcgacgccg
    10681 caactgccac caaggccgtc accttctacc gaaccactcc gccgaccggc gccgagggcc
    10741 tgcaggacat cagcaccaag aaggacaaag agtaatgaac gctccgttcc aggcgcgcgc
    10801 cgggctgcgc gatccgttca ccgccttcgt ctgtgacgat gcgaccgccg agatgctccg
    10861 gccggttgcg gtcgagcacg gctggagtcc ggaaaaggtc aacaagggcg gtcttcgcaa
    10921 tgccgtgcag tcgctctcgg tgtcggcaag cccgaacatc ctgttcgtcg acctctcgga
    10981 atctgccgat ccgctcaacg atatcaacgg tctcgccgaa gtctgcgagc ccggcacgat
    11041 cgtgatcgcg gcaggccagg tcaacgatgt tcggctctac cgcgacctcg tcgccagcgg
    11101 aattcacgat tacctgctga agccgttcac cgtcgagcag ctccgcgaca gctttgctca
    11161 tgcccaggcg ctcctgtcgg ggccgcgtgg tgaagcgcag gtcgacaagc cgcacgtcat
    11221 gtccgccgta atcggcgtcc gtggcggggt cggagcctcg acgatggcga cttcgctggc
    11281 gtggatgctt ggcgagcgcg cccatcgcgc gactgccctt ctcgatctcg acgttcactt
    11341 cggcaccggc gccctggcgc tcgacctcga gcccggccgc ggccttaccg atgcgatcga
    11401 gaatcccagc cgtatcgacg gcctgttcat cgagcgtgca atggtacgcg ccaacgaacg
    11461 gctgtcggtg ctgtcggcgg aagctccgat ccaccagccg ctaatcacgg acggaagcgc
    11521 cttcttccaa ctccaggaag agatgcgcaa tgcgttcgat tcgacggtca tggaccttcc
    11581 gcggcagatg ctcatccagc acccgcacct tgtccacgac gctcacgtcg cggtcgtcgt
    11641 cgcggagctc acgcttgcgg ctacccgcga tgcgatccga atcctcgcct ggctgaagtc
    11701 caacgcgccg cagacgaaga tcatcgtcgt cgccaatggc gttcccaacg gcggagcgct
    11761 cgagatcagc cgcaaggatt tcgagcagtc gatcgaacgt ccggtcgatg ttgtcttccc
    11821 gctggactcg aagctcgcgg cgcagtcggc caagctcggc aagccgcttg cggagatcgc
    11881 cacaggcaag acggccgcgc cgttcaacag cctcgtcaac atggtcctca gccacgcgac
    11941 cgaggaaggc gcagccggcg gttcggacaa gtccggcggc ggatcgaaat cgctcgtgga
    12001 taacctcaag tcgatgcttg ccaagccgaa gaaggcagcg tgatcactcg gcgggcgggc
    12061 tcttcgggcc gcgcccggac tggaagggac ggacagtaga tgattttcta cctgatcctt
    12121 ggcatcggcg gccttggcct gctcctgctt ctgatgaaga tgctgagcgg accgtcggca
    12181 tcgaagtcgg tcaagcgccg gatggagctc gttaaggagc gccacgccga aggcgtgacc
    12241 gccgccgcac aggcccaaat ccgccggctg atggctgctc gcgcaagccg cttcgaaggc
    12301 tttgcttcgt cgatcatccc gcgcccggcg ctgcttcgca agcggctcga gatgaccggc
    12361 aagaacatca cgctcggcaa atatgcgatg atttccctcg ggcttctcgc ggtgaccgtc
    12421 gctcttatga tgcttcgcgg cgcgccattc ttcctgtcgc tgttccttgg cctgttcgtc
    12481 agcgtcggca tgcctcacct ggtcgtcggc aagatgatca cccgtcgcgt caacaagttc
    12541 aattcgaact ttcctgatgc gatcgaactc atggtccgcg gtctgcgctc gggtcttccg
    12601 atcagcgaaa ccctgggcgt ggtcgccgcc gaaatcggcg gtcccgtcgg ggtcgagttc
    12661 cgcaccgtcg cggacaagat gaaaatcggg cggacgatgg aagttgcgct gcaggaaacg
    12721 gcggaccggc tcggcacccc cgagttccag ttcttcgtga tcacgctggc aatccagcgg
    12781 gaaacgggcg gcaatcttgc cgaaacgctg tcgaacctcg ccgacgtact tcgcaagcgc
    12841 gcccagatga agctgaagat ccgcgcaatg agctctgaat cgaaagcctc ggcctatatc
    12901 gtcggatcgc tcccgttcgt ggtgttcacg ctcgtctggt tcatcaaccc ggcctacatg
    12961 ggcggcttct tcaccgatca gcggctgatc gtcgccggtc tcggcgggct catctggatg
    13021 ggcatcggcg ccttcatcat ggccaagatg gtcaacttcg agatctaggg gacctgatcc
    13081 aatgcagcct tccggcccca cccttctcgg cttcgacgtc atctggatcg cgacgatcct
    13141 tagcggagtt gcgactctcg cggtgatcat ggccatctac gccgcgacaa cggtcaagga
    13201 cccgatggtc cggcgagttc gagcgctcaa cgagcgcagg gagcagctca aggccggaat
    13261 cgtcgcttcg accaacaagc gcaagaagct gacgaaccgc aaccaggcgg ccgaccgcgt
    13321 gcgggcgatc ctgactcagt tcaagatgct ccaggacgac cagctcgaaa agactcagcg
    13381 gcggttgatg caggccggca tccgcaacaa ggagctcgcc ttctttatca tcttcgcgcg
    13441 cttcgtcctt ccggttgcgc ttggcttcct cgccgtggtt ctgatctact tcgtcgaata
    13501 ttggcccgaa tggggcggct tccgccgtta cgcgactgtc gccggaatcc tggtcggaag
    13561 ctacaaggcg cccgacatct ggctgagcaa caaggtcaag aagcgcagcc acgcaatccg
    13621 caagggcctg ccggatgcgc tcgacctgct cgtcatctgc gccgaggccg gtctgacggt
    13681 cgacgccgcc ttcggccgcg tgtcgaggga gcttggcaag gcctacccgg agctcggcga
    13741 cgagttcggg ctgaccgcga tcgagctcgg attcctcaac gaacgccgcc aggccttcga
    13801 gaacctcgcc gcgcgcgtcg acctcgaggc ggtgcgcggt gtggtcacga cgatgatcca
    13861 gaccgagaaa tacggcactc cgctggcgtc cgcgttgcgc gtgctttcgg ccgagttccg
    13921 aaacgagcga atgatgcgcg ccgaagaaaa ggctgcgcgg ctccccgcca tcatgacggt
    13981 gccgctcatc ctgttcatcc tgccgaccct gttcgtggtc attctcggcc cggcggcatg
    14041 ttcgatcagc gacaacctgc tcaacaagta gcgctcgccc aatcggttcc gtgaccggaa
    14101 cggaatccgc cgtcccgcgc tgtatgcgca tcaggtggaa cgagggtgcg gaacatgatt
    14161 ggattcacat ccgaccaatg ggtgatcgtg gcgctggtgt tcgtgctggg gcttctcgtc
    14221 ggcgccttcc tgctggccgg cagcggccgc aagtggaaga cccgctatcg cgacgaggtc
    14281 cgtgagcgcg aggcgctcga agaacgccag cgcgaccgcg agcgcgaatg ggacgagcgc
    14341 gagaaggagt ggcgcgagcg cgacagcctg cgcgcggcgg cgatcaagga ccgcgatcgt
    14401 gatgacgacg gggttccgga tcgtaccgaa tactaggctc gatcagcctt cgatcttcga
    14461 gaagtccgcc acctggttta ctgcgtcgcg aaagcgcgcc agcaggttga gccttcgcgc
    14521 ccgcaccgct ttgtcgtcgg cattgacggt cacgtgatcg aagaactcgt cgatgggtaa
    14581 gcgaaggctg gccagcgccg ccatcgccgc ggcgaaatcc tctttctcga tggctttaac
    14641 cgcctttggc tccgccttgt cgagcgcgtc ggtgagcgac ttctcctgcg cctcgacgga
    14701 cccatcgccg actgccttcg ggtcccactt ctccttcttc aggatattcg ccgcacgctt
    14761 gaaggccgtc agcaggtcgg cgccctcccc tgtctcgaca aagtcctgaa gcgctttcac
    14821 acgagccaga agccgcacca ggtcgtcctc tccgccgagc gcgaataccg cgtcaaccag
    14881 gtcatggcgc acccccgcct cgcgttgctg gaccttcaac cggtcggcga agaattcgag
    14941 cacttcgggg gcagttcggt ctagccggtg cgctgcctcc gaacccttca cttgcccggc
    15001 gcggtttgcg agggcgccgc ggatcgcctt cgtaagcggc agcctgagac cgcaagaaac
    15061 gatcatttcg atcgatccga gcgccgcgcg gcgaagcgcg aatgggtcct ttgagccggt
    15121 cggcttctgg ccaatggcga aaaaggcgca gatcgagtcc agcctgtccg ccagcgcaac
    15181 cgctaccgat agcggctcag tcgccgtggc atactggtcg cggatcgcgt tgctgacagc
    15241 cttcggctcg ccctgcgcct ccgcgagata gccgccgatc accccctgaa gctccggaaa
    15301 ttccccgacc attccggtga cgaggtcggc cttcgccagc cgcgcagcgc gctctgcctg
    15361 gtcgggcttc gcgccctcga cgaccctctc ttcgacaagc cagcgcgcca gcttcgccac
    15421 ccgctcgacc ttgtccgcga cggttccgag cttctcgtgg aagatgattc cggaaagctt
    15481 ctccgcttgg tcttccagcg gcaccctgag gtcctggtcc cagaagaagc gcgcatccgc
    15541 cagccgcgcc gcaagcacgc gccggttgcc ctcgacgatc gccccgccgc cgtcgttggc
    15601 gtcgatattg gcgacgcaga cgaaagccgg cgcgagccca ccgtcatcct tggtgcaggc
    15661 gaaatacttc tggttcgccc gcattgtcag gacaatcacc tcgcgcggaa cgtcgagata
    15721 gtcagcgtcg aagcgaccga ggagcggaac cggccattcg gtcagcccgg cattctcgac
    15781 caccagcccc tcatcttcga cgagactgag cccagcgtcc ctggccgcgc cagccgcgcc
    15841 ttcgcggatg atccgctcgc gctcctcctg gtcgacgatg acgtggcagg ccttcagctt
    15901 ctccagataa tcggccgggc cgccgagcgt gatcgggccg ggatgatgga accggtggcc
    15961 gagcgtcgtc gcgccggcct cgatgccgtt gatcgccacg ggcacgatgt cctcgccgag
    16021 catcgcgacg attccgtgga gcggccgtac ccaccgcaag gagtcggtgg tttgcgacgc
    16081 ggcgccccag cgcatcgact ttggccaggg gaagccccgc acgatccgct cgatcatcgg
    16141 cccgaggaga tcgagcgttg gctggccggg cgtgtcgatg accgcgaaga acacgccgtc
    16201 acgctcctcg agatgttcgc gcttgaggcc cgtcttgcga agaaatccgt cgagcgcctg
    16261 cggcggcgcg gccgtgcgcg gccccttcat ctcctcgcgc cgcggctccg tctgaagcgg
    16321 caagccgcga gcgatcaggg ccagccgccg cggcgtcgaa aagacgtcga tcgccttgct
    16381 cgacaggcca gctttctcga gcgcttccgc gaacagccgc gccaggtcgt tgcgcgcgcc
    16441 agcctgcatc cgcgccggga tttcctcgca gcgcagttcc agcaggaagt ccgccgtact
    16501 cactgctccc acccattcag ctcaacccac gccgcgcaag cgcctttcgc cagatcgcgc
    16561 acccggccga tataggcctg gcgctcggcg acgctgatca ccccgcgcgc ctgcagcgtg
    16621 ttgaagatat ggctggcctt gatcgcctgc tcgtaagccg ggatcgggag cttcgccttc
    16681 agcgcgctct cgcactccgc ggccgccttt cggaacaggt cgaacaacgc gtccgtgttc
    16741 gcgacctcga aattccaggt cgaaagctcg acctcatttt ccctgaacac gtctccgtac
    16801 gtcacgcccg cgccgttgaa atcgaggtcg aagacattgt cgacgccctg aatgtacatc
    16861 gccagccgct cgagcccgta ggtcagctcg cccgacaccg gcttgcaatc gaagccaccg
    16921 acctgctgga aataggtgaa ctgggtgacc tccatgccgt cgcaccagac ttcccagccg
    16981 agcccccagg cgccgagcgt cgggctttcc caatcgtcct cgacgaagcg gatgtcgtgc
    17041 ttgagcgggt cgatgccgat ttcgttcagg ctgccgagat agaggtcctg caggtcgggc
    17101 gggctcggcg tcaagatcac ctggtactgg taataatggc cgagccggtt ggggttctcg
    17161 ccgtaccggc cgtcggtcgg ccgccggcat ggctggacga acgcggcttt ccagggatct
    17221 gggccaagcg cccgaagcac cgtcgccggg tgaaaagtac cggcgcccat ttccaggtcg
    17281 tacggctgta caagcacgca gccttgggcg ccccaatagc ggtgcagcgt tagaatcagg
    17341 tcctgaaagc tcagcgacac gaatagcccc gtctggtcgt atgcgagggc tttggcctat
    17401 cgcttggaag ggggcaagtg gacgccgccc cgggtcgttc ctacatgtcc ggttcaactt
    17461 ctcggcgcaa aaggcagctc atggtcttca aattcctaaa gcgcgcgctt gccctcgtcg
    17521 gcatcgccac cgctgcctac gcagccccgc aggccgcacc cgcccccgcc gcgcagccgg
    17581 cgctatggga ggtctccgat cccgacacga cgatctacct gttcgggacc atccacctgc
    17641 tccccgcgaa gcatcactgg cgcaccccga cgatcgacaa ggcgattgca agctccgacg
    17701 agctgatcgt cgaaaccatc atcgaccagc agaacccgca ggaactgatc gcggcactga
    17761 ccaggctcgg ctattcgagc gggcttccgc cgatcgagga gcgagttgat ccggcgaaac
    17821 gcccactgct cgaggcggcg attgcgaaga cccccattcc gagagcggtg ttcgaccgca
    17881 tggagacctg ggccgcggcc ttcacattgc ttggcgtcca gttcaacgcc atcgggctgc
    17941 agggcgagca tggcgtcgaa cagacccttc gcgacagttt ccgggctgac ggaaagccta
    18001 tcggccagct ggagacgaac gccgagcagc ttggcttctt cgacacgctt ccggaagcgg
    18061 cgcagcgggc actgctcgaa ggcgcggtcg aaactcccga cgagatcggc gccgagttcg
    18121 ctgagatgct ccgcggctgg acgagcggcg atgtcgatgc gatcgctaac accttcaacc
    18181 gcggcctcgg cgagtccccg atgctgcgcg aggcgctcct gaagcgccgc aatgcgaact
    18241 ggagccgctg gatcgagcag cggcttgccc ggccgggaac gaccctggtc gcggttggcg
    18301 ccgggcatct ggccggagaa tcgtcggtgc aagaactcct ggaaagccgc ggctacacgg
    18361 tgcgccgggt ccaataaggc gcgcaaagag cctcgaccgg gcggctaacg agcgcattgg
    18421 caacgaccta tcagcccacc gctaaattgc tgctatccac cgagaaaaat tcacctcagt
    18481 cagtttttgc tagacattta ttaacgccta agtgaccatg ctcgtcagcg gtatcgggcg
    18541 ggggccacga accaccggtt taagctttgg tgcggtgatc cgcgccatcg gcgatttacg
    18601 ccgaaacgcg gtcacacttc acgaaatgct gccggaaaag gcgtctcgca ccgattggga
    18661 tcggaggcgc atcatggcat ttttgccact tctcatcggc gcggcggttg cggcgacacc
    18721 gctgcctgcg gcgccgccag cgaacccggc tcctcacact ggccatcccg cgctgtgggt
    18781 cgtcaacgac agcgacacga tcatctacct tttcggcacg tttcacgccc ttgacggcaa
    18841 ttccgaatgg ttcggacaag cggtgaggac ggccttcacg gcatcggatc aactgatgct
    18901 cgaaacgctg gtgcccaagt tgcccgccgt cgcgatggcg cctagcccct atgggagcgg
    18961 accagtggcc cagctcgctc cttccgcctc ctacctcgcc acgaccaagg tggtgatgaa
    19021 cgcgggccgg acgaacggat tgtcaaccga ccacggggcc gacgcgatcc ttcgcgacgc
    19081 ggccgatttg accggaaagc cggtcgctgg cctcgaaagc ttcgagttcc agctcaacat
    19141 gttcagctcg cttccttcga atggccaatc gacggcgccg caagatgctg agacgattcg
    19201 ggccctgggg gcaatgctcg gatcgcttaa gtctgcctgg aagcgcggcg aggtcgaaac
    19261 ggtgttcact ccgctgctga tgcagatgca attgcagtcg ccgcaaagct acaagacgat
    19321 gttcgtcgag cggaataccc gctgggcgca ttggatagcg gaacgcctca aggcaccggg
    19381 cacagtgttc gtcgcggtcg gcgcgggcca tctcagcggg cccgacagcg tccagaggaa
    19441 gctctcgtcg ctcggagtga agtctgctcg cgtcaactga agtctccctt ctcccgttgc
    19501 gggccgagca tcattgccaa tctgcgcgtc ctcacatata ggcgccccct ccccggccat
    19561 ggtcatccct ggaggcgtgg cgggaccaac tggagaatga aacaatgagc gaacagctga
    19621 cgctgcccgc tgaagcgcgc gaacgggctg gcaagggagc ctcccgtgca ttgcgtcgcg
    19681 acggacgggt gcctgccgtg atctacggcg aaaagcagga gccgctggcg gtgcatgtcg
    19741 aggagaaact cctcaccaag atgctatcga cgggccactt caccaactcg gtcatcatgg
    19801 tcgaggtcgg cggaaagccg aaccgcacgc ttcccaagga cgtgcagttc catcccgtca
    19861 ccagccggcc gatccacgtc gatttccttc gcatcggcga gcatgcgcag gttcacgtca
    19921 acgttccggc gcgcttcatc gacgaagagc agtcgcctgg cctcaagcgc ggcggcgtcc
    19981 tcaacgttgt ccgccacgac ctggagctgg tctgcgatgc ggcgaagatc ccggacgaga
    20041 tcgtgatttc gcttgccggt ctcgacatcg gcgacgccat ccacatcagc cacgtcaccc
    20101 ttccggaagg gtcgaaatcg gcgatcgagg atcgcgactt caccgttgca acggtagttg
    20161 cgccgtcggc gatgaaggcc gaagccgagg aagaagaggc cgctccggct gccgacgagg
    20221 tccccgccat ggagcaggag ggcgaaggcc tcgaggaaga caaggaacag ggcactccgg
    20281 accaggaata agcccgcttc gcactcaaac agccgctcgc ccgaaagggc gggcggtttc
    20341 tttttgcccg ccccgcgcta gggaacccgg atgcagatct gggccggcct cggcaatccc
    20401 ggcgctcaat atgcgcttca gcgccacaac gtcggcttca tggccgcgga cgtgatcgcg
    20461 gacgcgcatg cgttcggacc gtggacgaag aaattccgaa gcctggtcgc ggacggcagg
    20521 atcggcggcc accgtatcct gctgctcaag ccccagacgt tcatgaatca cagcggcgac
    20581 gcggttcagc aggctttgag cttctacaag ctcgacctgg actcgctcac cgtgttccat
    20641 gacgagctcg acctcgcgcc gatgaaggtg aaggtgaagc tcggcggagg gaccgccggc
    20701 cacaacgggc tgcgatcgat cgactctcat ctcggcgcgg aattccggcg agtgcgcatc
    20761 ggtatcgggc atccggggcc ggggcagaag gaaaaggtca ctccgcacgt cctcggcaat
    20821 tatgcgaaga gcgagatggc ggtccttccc gacctgctcg cggcaattgc cgacgaagcg
    20881 gaatggctcg ccagcggcga cgacgcccgc ttcatgagcg aggttgcgct caggatgcag
    20941 caggcggaat agcggctacg gtggcttcgg cggccacgtt gatgcctagc cgcttgcggt
    21001 ggcgttcaac catctttctg aaccgcggat cgtcacgcag ggaatcgaag tcgggatcgg
    21061 tctcgaccat gcgaacgtgc accgcgctcg cagcatccaa ggtcctgtcg agcagcttca
    21121 gcgctccctc cttgtcgtca agatgggccg cgagaacgca ggcgaaattg tatttcatat
    21181 ttgcattgtc cggatcgatc agcattgccc gttcgatcca ctcacgtgcg cgctctcgct
    21241 cgccgagcac tgcataaccg cccgatatga tgccgagagc agcgccgtta ctggggtcgt
    21301 gctgaagcgc cttttcggct tcggacacca tcatccttcc tgcgtgcagc agcttttctc
    21361 gctcgttctg cctgtagaac cccgacagca ccgcccaggc gtggaaatcc gattccatga
    21421 tctgcacggc cctctcgtaa tgggctttcg cgccctcatg gtccccgcga agccggcgca
    21481 ggtgcgcagc ctccttgttc acctcccaag aatcgggcgc cagcttgagc gcctttacta
    21541 tctcagcctg cgcctcttcg tggcgcccct gctcgtcaag ccgccggacc atcggcaaat
    21601 aggcctcggc gatgttgggg tcgatcgcca gcgcggtgtg ggccgccgcg aagccgtcat
    21661 cgctcccaag gccgaaattg tagtgcaggt tggactgggc gtagccgagc agcgcccacg
    21721 cctgtgcgta ataagggtcg atctcgacgg cgcggctgca gatccgcatt acgcgctcct
    21781 cgcgccgcgg gtcgccgtaa ttgcccgttg tccaatattg cctcgccagc aggtagagtt
    21841 tgtaggcttc gacattggtc gtgccgcgct gctcgatcgc ttttttctcg ctagggagaa
    21901 gcttcacctt cagcgcctcg acgatcgact tgctgatctc gtcctggatt tcgaagatgt
    21961 ccgtgaggtc acgatcaaac ctgtccgccc agacgtggcc gccgcccgcg ccgtcgatca
    22021 gctgggccgt tatccgcacg cgattgcctg actttcggac gcttccttca aggacgtgag
    22081 taacaccaag cttgcgcgcg acgtcgcaga catcgaccga ccggcccttg aaggtgaagg
    22141 cggtattgcg tgcagtcacc tcgagcgacg acaccttgga caggtcggtt gtgatgtcct
    22201 cgctgattcc gtcactgaaa tactcttgct cggcatcgcc gctcatgttg gcgaatggga
    22261 gtacgcagat ggacgtcttc tgccgcttcc cccttgtcgg ttgtagcggt tccgcagcgc
    22321 tgtcgagcaa actggacacg ctggctatca gcttctgcca accgtcgtgg tcgcgctcgc
    22381 catcccagcc cttgagtcct gcgcattgga tctggttgaa cgggatcggc ggaatcgctc
    22441 catcgacgct ggcctggacg agcgtgccgg attcgcgggc ggaatccgcc tcggcgcgca
    22501 cccagtgcga cttcgcagct tcctcggacc acaggacgac caccgccttt gaagcgttca
    22561 accgttcctg gatgacctcg gcataagcgc gatgagcggg gagctcagcg tcgcgccaga
    22621 cgccataacc ggcgtcgcga agcgcggcct cgaccttcat tgcctgctct tcggtcgagc
    22681 gggcatagga cacgaaaacg tccgacatac gtgcggccgc tccacatttg cgctcggatg
    22741 tttacattcg agtcgtcgca aagaatagcc aaagcccttg aacagacaac ttttcccgac
    22801 ccagctttac gaaggtgacg tcgagccgga gcttctgccc gagctcgctt attctatccg
    22861 ttcgctcgct tccgacgatg cagccggccg gcgctggagc gacgagcacc gctaccccgg
    22921 ctacaccagc tatgcgtcgc tgaatgacct gccgaaacgc gatcccgcct tttccgagct
    22981 cgggaaggtc ttaacgaagg aggcgcgggg gttcgctcgc gaccttgggt gggattgcaa
    23041 gccgaagctc gacagcctgt gggtcaacct tctcaggaca gagggccatc acagcggcca
    23101 tatccatcct cacagcatcc tgtctggaac gctctatgtc gaagtgccgg ctggctccgg
    23161 ggcgatccgc ttcgaagacc ctcgcctgcc gctgatgatg gcggcgccgt cgcgcgacgg
    23221 caccttcgtt gaagtgcagc cgcgacccgg actgctcctg ctctgggaaa gctggttacg
    23281 gcacgaggtc cttcccggca caggcaaggc cgagcgccta agcatttcct tcaatttcgc
    23341 gtgatgcgcg gctaagcgcc tccgcaaccc ccgaaccgga gaacccatgg gctttcgctg
    23401 cggcatcgtc ggcctgccga acgtcggcaa atcgaccctt ttcaacgcac ttaccgagac
    23461 cgctgccgcg caggcggcga actatccctt ttgcacgatc gagccgaacg tcgggagagt
    23521 ggcagtgccc gatccgcgcc tcgacaagat ccgcgagatc gccggctccg cgcaggagat
    23581 cgagacccag atcgagttcg tcgacatcgc cggcctggtc cgcggcgcga gcaagggcga
    23641 agggctcggc aaccagttcc tcgccaacat ccgcgaggtc gacgcgatcg tccacgtgct
    23701 tcgctgcttc gaaagcggcg acgtcaccca tgtcgaagga cgcgtcgacc ccgtcgccga
    23761 cgccgacgtt gtcgagaccg agctgatgct cgccgatctc gaatcgctcg aacggcgagt
    23821 ccccaatctc gtcaagaagg cacaacaggg ggacaaggat gcgaagatcg aagcatcggt
    23881 gctcggccag gcgctcgagc ttctccgcgc gtcgcgccct gcccggctca ccgaacccaa
    23941 agacgcggag gaaggcaagg cactagctcg ggcacagctg ctcacggcca agccggtgct
    24001 ctatgtatgc aatgtcgacg aagcggacgc ggcgaccggc aatgcgctgt cgcaaatggt
    24061 cgcggcgaag gcagagtccg aaggcgcggt atccgtcgtc atcacagcgg ccatcgaggc
    24121 cgagatcgca accctccccg aagacgagcg cgaggccttc ctttccgacc tggggcttca
    24181 cgagaccggg ctcaaccgga tgatccacgc ggcctaccag cttctcggcc tgattacctt
    24241 ctacaccgca ggtccgaagg aagcgcgggc gtggaccgtt cacaagggcg cgaaagcgcc
    24301 cgaagccgcg ggcgagatcc actccgactt cgagcgcggc ttcatccgtg ccgagacgat
    24361 cgcctatgac gatttcattg aatgcggcgg cgaagccgga gcgaaagatg ccggcaagat
    24421 gcgctccgag ggcaaggact atgtcgtcca ggacggagac gtgctgctgt tccgcttcaa
    24481 cgtctaggtt gcgccagtct ctccgcccag ggtagcgcca ccattaccca caacagcccg
    24541 aacgcccagc cgccgatgac gtcggtcggc caatgcacgc caagcatgat ccggctgacg
    24601 ccgacaccaa aggcaaccag cagcgcagcg gccatcgccg gccatttcca acgggtgccc
    24661 acggtcagca ccagcgccag cgccagatag acgatcgtag cacccgccga gtggccgctt
    24721 ggaaatgatg gtgtgctcac atgtaccagg tgttcctggt cttccgggcg aagccgctcg
    24781 atcccgtatt tctgcgccgt gactagtccg cggccgacga gagttacgag cagcaccgca
    24841 acggcttgcc tccacccacg cgcaacgagt agccacgctc cggctacgac gctaagcgcg
    24901 attaccaccc gccaatcgcc gatcaatgtg aagccgcgcg ccaccgcgac cagagacgca
    24961 ttttcaccca catagagggc gtgtaggatc gcgccgtcgg ccggcccggt gccgaccgtc
    25021 atcattgcga accacaatga tgtcagcagt gcggcggcga ttgccacacg aagtttagcg
    25081 ggcgcgttgg atggttcagc catttgctga caacgcggca atcgcgcatc cggctaccgt
    25141 ggtgggcgcc gcttagaagt gggcgccgag ccggattccg attgttcgtg gcctgcccgg
    25201 gacaatccga gtttgggtac aggcactgca ggcaacgaac ctcgtcagtt cgttgcgctg
    25261 atcgaagaga ttgctgacga aaagctcggc actgtaattg gcccagtcga agcctgcgaa
    25321 caggtcgaca agcgtcgagg agcggatccg gccgagataa tcgttcgggt tggttccgtc
    25381 tccgtcgagg tcctggcgaa ggtccaccgc ggccgagctg cggtgggtga cactggcctg
    25441 gacgtgcgcc ttgccgattg agatcggcca ggaatagcga gcggtcgccg cggccttgaa
    25501 cttgggagtg atcggcagcc gcgttcccga cggcgtgacg atgaaagtgg ccgaacattg
    25561 ctcgtcgtcg gtgctgactt cgcagatgtt ccccttggtc ttggcgtccg tgtacgcggc
    25621 cgacccgttg agggtcagcc cgcccgcaac gtagctgagc tcggtttccg caccgttgat
    25681 gtgcgcatcg cgtccattgt ggatgacggt gaggctgttc gcaccgagga agctgaactg
    25741 gaacttcttc cagcgctggt gatagacggc gccgttccag cgaagcgggc cgaactcggt
    25801 cttccacccg agctcgtagt tggtcaggaa atccgggtcg tagggcggct cgcccggctg
    25861 gcggttgagc ccgccgggac ggaaaccgcg cgaccaggtg gcatagaaca tcattctttc
    25921 attgggtttg tacgaggcgt tcagccggtg aaggaagccg cttcccttcc ggtgcagcgg
    25981 ctccgccact ccgttcacga cggtgccgac gttggtgcag ggaattccgg ctatgctccc
    26041 cgatgcgaac tcggcaccct cgtcgtcgag cagctgctcg ccgttgacgg tcaggcagcg
    26101 gcgcacgccc gagcttccac cggcgccgtt gggtggcggc gggaagcccg cgccatcggc
    26161 ctcgccgaat gcaggattct tgccgaaacc cgcgaatccg aacaggctgt tgtcgaacct
    26221 gtagaggcgg ccgccggcgg tgatcgtcac ctgtggagtg acgtcgaagc tggcttcacc
    26281 gaacaacgcc cagtccttgt ccttgcggtc ttcgagcgtc agccagatcg ttcccggata
    26341 gccgttgaca gacaactccg gcgcgaggcc gtcgatcttg taattctggt aaatgtggtt
    26401 ggtttgccgc tggtagaatg cgccggcaag cagccggaac ggtcgatcct gcggtgtcgc
    26461 gatccgcagt tcgtggctca tcttcttaaa gtgctcggtg ccgataatat actgcagcgg
    26521 attgatgtcg ttgccgtcgg aatcctcgta atagaagtag ttggcgaggc ctcccaggct
    26581 ctcgtaggcg gcgtcgtagg cgtcggtata gtcagtatag tcgaggaccg aggacgtcgg
    26641 gcggtccatg taggcgccgg cataggtgac gtcgaaattg aaaagctttc cttcgatcgt
    26701 cagcgcggcc tgggtgaact tgtccctgat cacctcgtcg ccgcggaaac gctggatctc
    26761 gaggtcgcca agcgtcgggt cgaccgcgta gaagccgtcc tgcttcatat tctgatgcat
    26821 gatcgttggc gtgatcgtcc agttctcgtc gaggtcgatc ttaagcgcgg cccgcccgcc
    26881 gtagacccgg cggccgttga agtcgtcttc gacaaaggcg ttattgtcga cgctgaaccc
    26941 gtcccgaacg cacccgatcg tttcatcgtc ctcatcggtg atcgcggtgc cgcaataggt
    27001 gcgcgtaccg gggacattgt cgatgaagcc cgcgtcccgc tggtagaatg cgactcctcg
    27061 gaagccgatg ttttcggcga tcggaacgtt gagcatgccc tccaggcttc cgccctggcc
    27121 gccgtgagcg acggtgttca gctctgcgtc cacccgcccg taagttgccg taaggtcggg
    27181 cttgttggtg atgatccgga tggtcccggc ctcgctcgac gcaccgtaaa gcgtgccctg
    27241 aggcccggcg aggctttcga tacgggcgat gtcgtagatg tgcacgtcga gcgcgccgcc
    27301 gatggtcgtc accggctgct cgtcgagata gacgcctacc gacgggaacg acccggaatg
    27361 gttgccgtcg ccgccggtgg caactccgcg catgtagacg acagcgccgc ccgactgcga
    27421 cgtgttccag ctgaccgacg gcagctgctt cgtatagtcc gcgaagtcgg agatattgag
    27481 ctggtcgagg cgccgggtgc cgatggcctg gatcgagagc ggcacgtcct ggaggttctc
    27541 ctcgcgcttc tgcgctgtca ccaggacctc gttgtggtcg gcaacctccc cgtcctgcgc
    27601 gacctgaacc tgcggcggct gcgaggtgac gtcagtcgcg ttcgtgttgg gtgcgggaga
    27661 gtcggtcgtg tccaccggcg gctcgacctg gtcctgggcg accgccggag cggaaatcgc
    27721 cgtcgatgcg agaagtccaa gcgcaatcat gcgaagcttg cggtcgatca tcgaatgagc
    27781 cccccattcg cctgtatgtc ggcatagcga cagagccgtc gtcgattgtc aaacggcagt
    27841 tttagcgggg ttagcggatg ttggcgttac gttgcagaaa tgacgcaggt gcgacggggt
    27901 agctctcggc aatgcttccc agtgccgtct tcagcggcgc caggtgatgc tcgtagagtc
    27961 gccattcgtc ggtcgcgtcg cggtagatcg gacgccgcac ttgttccgag ctggcagtgc
    28021 gtaccgcccg cttggtcttg tgaaactcaa ggcagtcggg ctcgaactcg aggccgcaat
    28081 agtcgaggag cgccctcacc tccgcctcgg tgtcgtcgac catccgctcg tagataacgc
    28141 gatggactcg gcccggcagg acggcatcga cgtgcgccat caaccgcacg taatcggaat
    28201 agtagcggcc cacatcgcca aggtcgtaag tgaagtcctg tccgcgcgcg aaatgctggc
    28261 ggaaattgga gaagcagcag gcgatcggat gccgccgggc gtcgatgatc ctggcgttgg
    28321 ggaggacgag ctggataaag ggcaccagca gccagttgtt gggcagcttg tcgacgaaga
    28381 acggccgtgc ggtgcgtctc tggactgcgg cgcgccggag atactaagcc ccgagctcgg
    28441 ctcgctcggc ggcgctgagc tcgagcaccg attgcgattt ccgcccgtcc tggcgcgcga
    28501 cggcggggag gtcaggaagc tccgaagtcc cttcgaccag gctgtgcgag gcaagaatct
    28561 gttcgaccag ggtggagccg gcacgcggca ttccgacgat gaagatcggg tcgggcgcct
    28621 cgcatccgcc gccgcgcgcc gcgaaggctt cggcggtgaa cgcctcgacg atctggtcga
    28681 ccgttcggct gatagcctcc gctctgtacg ggcttcgctt caggcgcagc gcattggcgc
    28741 gtgcataatg ttcgaaggct tcgtcgacgc gtccgcgatc gtgcatcgcc ttgccgagcg
    28801 caaaatctag gtggagccgg tcctgatcgt cgaggccgga tgagtcgagc gctttttcca
    28861 tcgcgtcgat gtcctggtcc tcgaaggtca ccgtcttcaa attggcgagg ctccaccagg
    28921 cttcgccgag ctccgccttg atcgcgattg ccttgcgata ggcggcgatg ccctccgcct
    28981 ggcgcccgac ggttttcagc atatggccat agctcagcca caccttcggc tgcctcggcg
    29041 ccttggcgag gacgctttcg tacattcgaa ttgcttcgtc gaaatcgccg agacgtccaa
    29101 gtgtcgccgc cttcaggttc cagtgggtga ccgtcgcagg ctcggtagcg aaaatatcgt
    29161 cgagcaattg catcgcttcg gcaggctgtc ccgtccgccc cagcacaagt gcaagattgg
    29221 ccttggccgc gacccagccc ggagcgatct cgacggcccg gcggagcaaa ttctcggcat
    29281 cggtccagcg gcctatgcga gcggccagct ctgccagcat ccggatggcg gcggcatcga
    29341 acggattgtc cttcaggtgg ggcttcaaca agcgctcggc gacgtcgagc ctgttttcgt
    29401 tgagcgctat ggccgcctcc aaaaggcgcg gatgcaagtg agccagtgcc ggtgcgcttg
    29461 tcgccacgaa cgctgtgtag cgcggcctat tgcggcccgc tatgcgtcgc tgatgatcta
    29521 cttcgaagac ctggaggtcg gggccgaaac ctatttcggc tcctacgagg tgacccggga
    29581 ggaagtgctc gaattcgcgc gcaagtacga cccgcagccg ttccaccttt ccgacgagga
    29641 agcggccaag acccacttcg ggcgaatcgc cgccagcggc tggcacacct gcgcgatgac
    29701 gatggcggtg atcgcccgct acgtcgtcgg ggacgaacag gccgggctcg gctcgccggg
    29761 cgttgacgaa ctccgctggc tgaaaccagt ctatcccggc gacacgctcc acgtccgcgg
    29821 caagatcgtc gagacgaggc cgtcacgaag caagcccgag atcggctcct ttcggaccga
    29881 aacgacggtc accaaccagg acgaggtgcc ggtgatgcgc ttcacctcca tcgtgctgat
    29941 gcgcaggcgt ccgcagccgg gcggctgaat cccgcgtcct tacttgtccg ggtcttcgac
    30001 cttgaacggg tcggacttgc tcggtgcggt gggaagcggc ggccgcggaa gcacttcgtc
    30061 gctgttcgcc gcctgccaga gcatcgccgc aaggatcgtc gcagcctggc gaacgtcgtc
    30121 gggcggggca tggtcgagcg tgtcgacgct cgaatggtgc gtgactccgc cgtagtcgag
    30181 cgggtcctgg atgaactgga agccgggcag gccgaccgcc tgcatatatt cgtggtcggt
    30241 cccgccggtc ttgctcgtca ccactgccga cgcacccatg ctgtcgaacg gggagagcca
    30301 cttcttcagc aacgggatcg cggcaatgtt gttctccgcg tagatgccac ggatcttgcc
    30361 ggcgccgttg tcgagattga aataggcctt gagctggtcg tagcccggct tcttctcaat
    30421 cgggaaggcg cccggccatt cggcgaaata gtcgagcggg ccgagcccgg gatcgaccgg
    30481 acggtgcgcc aggtgctgct cgatataggc ggtcgagccc atgatcgcct gctcttcgcc
    30541 gctccacagg gcgaagcgga tggttcgctt gggccgcacg cccaggctct tgatgatccg
    30601 ggcggcctcg atgacgatca cggagggcac gccgtcgtcg gttgcgccgt cggcggcgat
    30661 ccagctgtcg aagtggccgc ccgccatcac atagccggcg ttggggtcgc tgccgcgaat
    30721 atccgcgacg agattgtcgg cggtaaggtc cctttcgttg aagcgggcgg caatcgtgaa
    30781 gctgatcacg ggcggcctgc cgtcggtttc gagccgagcc agccgccgat aatcctccgc
    30841 gccgagctcc atgaacggca gagcaagggt cttgcccggc tcgatcagat agccttcacc
    30901 gctgaccagg ccccagtcgc gatagctctt gcggaccatg ccgaccgcgc cctcggcctt
    30961 gaggaaccgt gacagctcga gcgggaattt gtcgcctttg acgaactcct tgtacgtccg
    31021 cagctcgtct ttcgggagct catattcgtc gagcttggcg atgtcgctgt cctcgtagcg
    31081 gcggaacggc gaggtggacc attgcctggg cgcgccgggc aggctgacca ttacgatctt
    31141 gcccgcaagc ttgccgcgcc atttgtcgaa atgctctttc ttgctcatcg gcgcgaggat
    31201 caccggcgcg gtaagggggc cgttcgtcgg cggcgaccat ccgaccggca tcgatcgcat
    31261 cactatcccg cgcggttcga ccatctgcgc cgaccaggaa tcgaggttcc agccgagtcc
    31321 gaactggtag ggttcgcggt gcacgttctc gagcccgtac tggcggaact tgccgagagc
    31381 ccagtcggca gccctgtcga aattctccga gttggtcagc cgcggaccga tcccgtccat
    31441 tagctcggag gcattacgca tcgcctggct gtggctgagc ccctcgtcga tgatccggtc
    31501 aatctcgctg ctggccccgg cggctggcgc ggccagcgcc gcaagcgcca cggaagcgac
    31561 gcaaacccat cggaatcgca gcattcgtcc ctccccgaaa caggagagcg caccgtgcat
    31621 gaatccgcga gcgccgcaat cgcattactg caaacgggcg aggagcgtcg gcgaaccttt
    31681 agcggcggtt cgagcgctga tcgtcgtcgc ggtcgcgatt ccggtcgcgg cggctgcgat
    31741 cgcggtcgtt gcggtcgttg cggtcgcggc ggtcgaatcc gctccagttc tcgcggtttt
    31801 ccctgcgctc cctggttccg ctgtggtggc cgtcacggtc ccggcggctg gtccagtacc
    31861 gcctttgcct gtcggtccag cgatgcggac ggcgatagct gtcgtaaacg taatagccgg
    31921 tgcccgggta ataataattg tcgtaccagc cgtaataggg cgcgccgtag ctcccatagg
    31981 tgccgtagct cccgtagccg ccgtaatagg ggtcgtaata accgccgtag ccgccgtagc
    32041 cggtgctaac gccgatcgag acgccgctgc cgtaaccgcc atagccacca tagccgccat
    32101 agccgccata gccgtagccg gtggcgcagc cgccgagggc cgccgaaccg gcaagaagaa
    32161 gtacaaggcg tgcgcgcata agtccctccg aacgcgagga tgtttaggtt aaccgcggac
    32221 gaaggatgcg cctgtcctga tgtcgctggg atgaatgaca atcgtcttcg gcgcgcgata
    32281 acgccgatga aggtcagtcg ctgacgcccg ccttgcggtt ggctcggcgc cgctttgcct
    32341 tgttctccgg ctcgatcgcg ccggtcaccc gcaccttgcg cttcgcttcg gcccagacgt
    32401 tccgataggc gaggtggccg aggatggtcg cgaacagcag gaagacgacg accgctatcc
    32461 ccgcggcatg cctgttctcc agcttcggct ctgcggccca taccaggaat gcggcaacgt
    32521 ccgtggccat ctgatcgacc gtaggcggcg tcccgtcggc atattggacc tgtccttcgc
    32581 tggtcagcgg cggcggcatc gcgatgttca aattggcgaa gtacgggttg aagtagagtc
    32641 cctccggagt cttcgctgcc ggaaacttgt gtaccagctc cgcgggctgg ttctggtaac
    32701 ccgtcagaag cgagtggatg taggccgctc cgccctcgcg cgccttggtg atcagcgaca
    32761 ggtcgggcgg gagcgcattg ttgttcgcag cgcgcgcggc cacctcgttc ggatagggcg
    32821 acgggaagcg gtcggacgcg agcgccggcc gggttgcggc ctcgccggtc tccgggttga
    32881 tgctcgggac ttcgatctgc cactggctgg cgatcgcctt cacttcggct tcgctatagc
    32941 cgaggccttc aaggtcatag aaggcgacgt ggctaaggcc gtggcaggcc gcgcagacct
    33001 ccttgtacac ctggaagccg cgctggagct gctgccggtc gaagtggccc agcgggccgt
    33061 cgctggccag atggagcggc ttgggatgct tgtggaactc ctcctcggcc gtcggctcgg
    33121 gagggtcgct gaaatgggtg ctgaggccgc tgaacagcga ccataggagc acgaccgaaa
    33181 aggcagcccc gatgaaaccg agtaaccagc gaatcattta cggctgctcc cttcgccggc
    33241 gatggttgtc gtgccgggct cgacgccggc cggagcgctt tcctgctttt ccccgtgcaa
    33301 gaccgaatcg gtgatcgagc ggggcaatgg caacggagtc tcgaacttcg agatcagcgg
    33361 caggatgatc aggaaatgcg cgaaataata tgccgaggta atctggccga tcgcgaccgg
    33421 cagcgcggtc gccggctgcc cgcctgccca gcccaggatg agaacatcgg cgaccaggat
    33481 ccagaagaat gtgcggaaca gcggccggta attgcccgaa cggaccggcg acttgtcgat
    33541 ccagggaagg aagaacagca gcaggatcga agcgaacatc gcaagcacgc cccacagctt
    33601 ggccggcagg atgaagtccg tcgtgaaagc gcgaaggatc gcgtagaagg gccagaaata
    33661 ccattccgga acgatgtgcg ccggggtcgc cagcgggttc gccggaatgt aattgtccgg
    33721 gtggccaagc gcgttcggcg cgaagaacac gacgagtgcg aaaacgagca ggaccccgcc
    33781 cgcgaaccag ccgtccttgg cggtgtagaa cgggtggaac ggaagcgtgt ccttctcgtc
    33841 cttcacgtcc actccggtcg ggttgctcga tccggggata tggagcgccc agatgtgcag
    33901 tacgacgacc gccgcgatca cgaacggcaa caaatagtgg agcgagaaga agcgggtcag
    33961 cgccgcctgg tccggagcat agccgccgag cagccacacc cgaagcggct cgccgatcag
    34021 cgggatcgcc ccgaagaagc cggtgatgac ctgcgcgccc caatagctca tctggcccca
    34081 gggcaggacg tagcccatga aggccgtcgc catcatcagc aggtagatga caaggccgag
    34141 gatccacacc agctcgcgcg gcgccttgta cgatccgtaa tagaggccgc ggaaaatgtg
    34201 gatgtaggtg acaatgaaaa agaagctggc gccgttggcg tgcgtgtagc gtagcagcca
    34261 tcccgcgttg acgtcgcgca tgatgtgctc gaccgaattg aaggcgccgt cgccggtcgc
    34321 ataataccac atcgcaagca cgatgcccgt gacgatctgg atggtcagga aaagcccggc
    34381 gaggactccg aaattccacc agtaattgag gttgcgcggc accggatagc cgccacccac
    34441 cgcgccgtac acaagacgcg ggagcggcag gcgctcgtcg agccagcgca tgaacggatt
    34501 tttcggttcg taggccttgg cccaggaaaa gctcattgtg tcacgctctc ccctcagccg
    34561 atccggaccg tggtcggcga cgtgaattca taatcgggaa cgaaaaggtt gctcggcgcc
    34621 gggccggagc gaattcgggc tgcggtgtca taggccgaac cgtggcacgg gcagaaatag
    34681 ccgccgaacg gccccttgtt ctcaccctcg ccgatgccca gcgggacgca gcccagatgg
    34741 gtgcacacgc caagcgtgat cagccagttc gccttgccgg gcttggtgcg ctgggcaagc
    34801 gtctgcgggt cgcgaagctc ggacatcggg acagcattcg cttcctgtat ttccttggga
    34861 gtcaggttgc ggacgaaaac gggctgcttt cgccataccg tcttgatccc ctgcccgggc
    34921 tggatcttgg aaatatcgac ctcgacggtc gacagcgcca ggacgtccgc cggaggcgac
    34981 atctggacaa gcagcggagc aattgcagcg acagcgccga caccggcaaa gctcaccgcc
    35041 gcaacattga gaaaatcgcg gcggcgaacg ccatcgccag ccgtaaccga aacgtcagcc
    35101 atgcttaccc tatgacaagt ggcggcccgc ccaacggggc ccccttaggc gattggcggg
    35161 cctgatagcg accgcgtccc gcactgccaa ggggccgatt tcgcaagtcg ccggctcaat
    35221 acgcaaaatg ccgagcttgc ttccgcggcg cggcctggca atgagcctgc cgatgctttc
    35281 cctcgaccag cagcaacagt cggcgaagga ctggttcgag tcgctccggg accggatttg
    35341 cgccgccttc gaagagattg agcgcgaagc cggatcggat tcggccttcg tccgcacgcc
    35401 gtgggaccgc gaggacgaat cgggcgccag cggcggcggc ggggtccgcg cgcaaatgaa
    35461 cggcagcgtg ttcgaaaagg tcggcgtcaa cgtctccacc gtcggcggcc gcttttcgcc
    35521 cgagttcgcc aagacgatac tgggcgctga cgaggccgac ccgcgattct tcgccaccgg
    35581 gatcagcctg gtcgcgcaca tggccaatcc gcacgtgccg gcggtgcaca tgaacacccg
    35641 tttcctggcg acgacgaagc gctggttcgg cggtggagcc gacctcaacc cggcgatccc
    35701 ctgccaggag gacacggacg cctttcacgc ccggcttcgg gccgcatgcg cggcgcacga
    35761 cccgaccttt tacccgcgct tctcgaaatg ggcggacgaa tactttttcc tcccccaccg
    35821 tggcgtatcg cgcggggtcg gcggaatctt ctacgaccat ctcgagtgcc gcgagcccgg
    35881 cgagggtgcg accttcgatc agaatttcgc cttcacccgc gacgtcggcg aggccttcct
    35941 cgacatcttc cccaaaatca tccgcaagcg catgggcacc aagttcagcg aggctgacat
    36001 ggagcggctg ctcgagttcc gcggccgcta tgtcgagttc aacctgctct acgaccgcgg
    36061 aaccctgttc ggtctcaaga ccggcggcaa catcgatgcg atcctgatga gcctgccgcc
    36121 gctggccaag tggagctaac gcctccgcgg cgctgacctc acggcttccg ttttcgaatc
    36181 gaccgccgcc ttccagttca tgatccggtg gacgacggcg gcgcgctcgg ctggagccag
    36241 cctgtccgcg atgtccaccg tttcgttcgg gtcgcgcaca atgtcgaagg cctgcagctg
    36301 gtcggtgaca taataataat tgtacttcat ccgcccttcc tggaagccca tcaccaggtg
    36361 cagccacgcc gctgcgaaga agacgcgccg cggccgcagc ggtttcgtaa ggtcgagtcc
    36421 ctggaacgtc tccggcgcgg gcactcgagc cagcgacagc agcgtcggag cgacgtcgat
    36481 gaggcggacg ggagaagggt cgacgacacc agaaaacatc cgcttgttga cgagcatcag
    36541 cggcacccga accgtctctc gatagacgtc gttgccgtgg gattgggtgc cgtgctggag
    36601 gaacgcttcg ccgtggtccc cgactatcac taccagcgtg tcgtccagcc ggccgttctg
    36661 ctccagccac gcaaccagct caccgacctg ccggtcggtc tccctgatcc cggcgatgta
    36721 gcggctcacc gcaagtttcg ggttgccggc gatccgcgaa ggatccgcac cgtagggata
    36781 gtgggtccgg taggtccata gcagcgccgc gaagggctgg ccggactgcg tgatccagtg
    36841 cctgagcgag gcgaaactgc agtcctcgca ttgccgatcg tcggggattt cctcgagatg
    36901 gccggcccgc cccttcaggt agcggggaaa gtccatgaaa ccccagttcg ccgaaaatac
    36961 cgcggtcctc ctgccgctgg agccgagcga ttcgagcaat gtggtcgccg gaaattcggg
    37021 ctcgaccatc gggatcgcgc gcggggacac cggcgggtac atgcccgcca tcaggctgaa
    37081 cagcgacatc ggcgagctcg ccataggcgc gaacgtgttc gggaaataag cggcattggc
    37141 cttgagccgg ttcaggttcg gcgcggcggc cgagtccaga tagtcggtcc cgaccgattc
    37201 gagcacgacc accaggacgt tgcggatatg cgcctcgcga attgcaggcg gagaaatgac
    37261 gcttttcaaa gcgtaggtct cgaaaggatc gagcaaatcc ggatcgctga cctgcacggc
    37321 ccgtccggac ggcggcgcga tcgccgacat cgccagccgc catccggcgt tcgcgttccg
    37381 cccccggctg tcgccgtcac cgtacagaag cgcgtgcagt ggcaaggcaa ccagagccgg
    37441 cagcgccgcg aggaccacgg cccacgccac ggccgggcca ccgagactgc gccaacgccg
    37501 gaccgctgga agaagggcaa acgacgctgt cagaaccatg gcaaggccga ggacgagcct
    37561 gtccgcccgc gtcatatatt tcgtcagcga ggcgagaccc gagaggttca ggaagtcgcc
    37621 gtagctgagc aagtttatcg tcgccggctg attatagacc ctcatgactc cgacgttgat
    37681 cgcgccggtc agcatcagat acccggcggc cagcgccatg aaggtcgccg ccgccgcggc
    37741 cgagccccgt gcgatcgcca aggtcagcaa tgcgacgatc gagaccgcga gcgcgtccga
    37801 tccgaggtgg ccgatcgcgg cgagcaccgt ctgggccgtc agctgttcgg gcggcggctg
    37861 ggcctggtag gcgatgatca gccggcagag gaacaaatgg ccaaggacga tcagcgcata
    37921 gagcaggaac ggcagcgtcc cgctcaaccg cgagtccgtg cgcgccatca gcctgaggtc
    37981 ccggcaggga tcaaatgatc gtttccttcc cccttcgcgg ttggctccgc ccaccggcgc
    38041 ggatat
//
LOCUS       DATAKH010000104        18421 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_20954,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000104 DATAKH010000000
VERSION     DATAKH010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 18421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18421
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20954"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VHN55_04280"
     CDS             <1..243
                     /locus_tag="VHN55_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013833861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2803183.1"
                     /translation="AYMWLEGWLSKNKLPPHVSLVTCAAAPSLFYADWVERIPEDCPR
                     LRALRAELLSLPSVKRCVEEARPYRPFFPLGAPDRD"
     gene            complement(240..809)
                     /locus_tag="VHN55_04285"
     CDS             complement(240..809)
                     /locus_tag="VHN55_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX2803184.1"
                     /translation="MASRNPRMHGKVEGATARCAVPGCKRVGEYKAPIQPANFDGPGA
                     YQLLCLEHVRHHNSKYNYFEGMSPEEINEAQSPLAGWERPSRRHRPAGEDPMPAWNDF
                     ADPLDAIAARFRRADRGPPQRFSPEERRALGVLGLGEDTDLHSVRQKYSKLVRHFHPD
                     RNGGDRSQEQKLGQVIEAWQLLKKARAFA"
     gene            849..1130
                     /locus_tag="VHN55_04290"
     CDS             849..1130
                     /locus_tag="VHN55_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HEX2803185.1"
                     /translation="MDALATGPVSTEMRRRLQSLDPTRVELVDDSEKHRGHGGYNPAG
                     ESHFTLLIESPAFAGKSRVERQRMVHAALGELVGERVHALSIRARAPGE"
     gene            complement(1160..4225)
                     /locus_tag="VHN55_04295"
     CDS             complement(1160..4225)
                     /locus_tag="VHN55_04295"
                     /inference="COORDINATES: protein motif:HMM:NF015737.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HEX2803186.1"
                     /translation="MRNLLSTSGMGAIAVALASPATAAETVISTATTTPVVTSTTGDL
                     RITSAGSIKRTTAGAAVTINSNAKVKNEGTITITGANGSTGILANPGLAGDITNTGTI
                     TLDENYTPTDGDNDGDLDGPFAQGNNRFGIRVLGGGTYTGNVVNSGTILVEGNQSAGI
                     AIDSALTGSLTNTGKITVTGNDGVAIRTSAVSGNVTVGNGANVSVQGQNSVGLLVGGN
                     VGGSVVVQGGVSATGYRNTSVPADPSKLDSDDLLQGGSAVLVSGNVAGGILLDARPAD
                     NSTTDTDEDDDGVPDAQESTASVTSFGAAPALKIGSASQDVSVGAGSSGFGLVIKGAV
                     GGHGVYSGVAGTGVSIGGAGHSVNIAGGMNLSGTVQASATKANATAIHIGDGATVPTI
                     NVLGTVTAQGGGTQTTAAQAIRIDSGATVNTIRNSGTIAAGLTGTDGSAAAIVDRSGT
                     VSLIENSGNLGVANASELGSRGTAIDVSANTSGVVVQQVAAAAGKPAPLITGNILFGS
                     GNDSLLVSAGTVSGNVDFGGGSDSFGLGGVFRGQLINSAGVTVNVGSGGFLDVRNLGA
                     VSLASLTTGTNAQLGVTIGESGHTLYTVAGEANFGTGTNVVVTLQKVATAPGTYTIVD
                     AGTLTGAGNLTSSVVTLPYLFTSSLASSPADGQVSLQVAFKSASELGLNTSETAVLDA
                     ALAAVDSDQSVAAVFLSLEDSATLKGTLQQLMPEHAGGAFETVSKSTRLAAEQLGDPR
                     PLGTESGLWMQQFGWSSKKSIGSTADFDVGGWGVSGGYDRQLGPIGRVGVTAAYVAGR
                     NSVAANDLVSDHYEGGIYWRGGTGPLRAFARAAAGTVSFDSTRNFAGEVDGTTVTRST
                     EGKWNGRVYSGAAGLSYTLRAGRLTFRPSASIDYIKLTEKGYTESGGGGAMDLTVRER
                     SSNETGANALLAVGYELLGTDESATWLRLELQGGRREILSSSLGRTTASFGDGETFTL
                     TPEERTSGWRGALRILGGGSSVSLVGEVGAEQLQGRTAVNGRLGLSFTM"
     gene            4500..5396
                     /locus_tag="VHN55_04300"
     CDS             4500..5396
                     /locus_tag="VHN55_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019052181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEX2803187.1"
                     /translation="MESTIEMSLAPVTHDLGGFKVYRTLPHKQRTMVGPFIFFDQMGP
                     AHLSAGQGIDVRPHPHINLSTVTFLFAGAILHRDSLGTRQRIEPGAVNLMTAGRGITH
                     SERSPPDERAEGPHLSGIQTWLAMPRSKEEVAPGFEHTPAADLPVVDVDGVEVRLIMG
                     EAWGAVSPVTCHSPTIYASMLMPAGSSLEIDCDADERALYLLDGDISVDGTPLEPQHL
                     VLLAPGHRPLLKSKQGARMMLCGGAPMDGERHVWWNFVSSSRDRINEAKRAWKAGEFA
                     LPPDDNDEFIPLPEIPMTVSYP"
     gene            5393..6277
                     /locus_tag="VHN55_04305"
     CDS             5393..6277
                     /locus_tag="VHN55_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2803188.1"
                     /translation="MTEFRLVPLSTGISLNVALDGPPDAPAVILLHGFPESHRTWREI
                     APRLRDRFRLIMPDQRGFAGSDRPQDVNSYKPARLVEDVFALADFFGLESFSLVGHDW
                     GGAVGWASAIRKDPRLARLAVVNSPHPLIFQKSLVEVAEQRSASQYIAAFRTLGFEKL
                     VEAKGFEWFFEKTFSGHVDTALIPEPEKRQYIAEWSQPGALTAMLNWYRASPLVVPPP
                     GVTVPLPDALLKLSSTVEIPTLVIWGIKDKALLPVQLDGLDKVVTDLKVHRIADAGHF
                     VPWEAPDEVAAALSDFLR"
     gene            6387..6839
                     /gene="nusB"
                     /locus_tag="VHN55_04310"
     CDS             6387..6839
                     /gene="nusB"
                     /locus_tag="VHN55_04310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEX2803189.1"
                     /translation="MKTAARSRSRSAARLSAVQALYQREMEGTPVPRLLKEFHDHRLG
                     ATIEDQQYHEAEREFFDDIVAGVEARLSDIDKAISAKLASGWTLERLDRPMRAILRAG
                     TYELIARADVPVGSVISEYVDVAHAFYDKRESGFVNGLLDAIAKEVRH"
     gene            complement(6869..9079)
                     /locus_tag="VHN55_04315"
     CDS             complement(6869..9079)
                     /locus_tag="VHN55_04315"
                     /inference="COORDINATES: protein motif:HMM:NF037144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX2803190.1"
                     /translation="MRYIDFALDGAAIDIQVHMEEQPDGTILVRLTSVGGPIDIRGLF
                     FDVTDPALLSSLQVSGIDITSFQTGDESVMNLGHGVNMHGGGRQPFDVGVEFGTAGHG
                     FGMVTSTNFILSSTTGPLTLDLLSLVDFGVRLQGSGAPPKLVEIAPAAPDAIADSFDA
                     TEDETIVFDVLANDTDADGTGDFRIVSVTDPEHGTATISDDGTRIIYTPDANYSGADS
                     FGYSMIDGHGGGDDTVAAIAVAAVADAPTLTLTTAAGADVNHIAVTVSAAVTDTDGSE
                     YIDRFVFSGLPDGASVVGEGDLLYDPSSTGGTLTRTFVVELAANTDFDFDFTVTAVSR
                     EQSNGSEATTTDSVGVLVDSNSNDFSLNFTATDQSIWNAGDAFQIVDDRFIGFTFDPP
                     EATSGGFIYGYADLYLKAGLQSTLTFDAGSIDAEAPWNVGIDTTYNHTTDVMLIESFT
                     DLMSSGVTFSTTGPGGSYVLDFIFNYAISAGLGIDFEVDSYDLFSFGSSNNFTVNLLT
                     VDSEDLSLEFEFPYGLSITLAWPDVDTTSLVSTTGSNFTSSGESNNFFDLGLDVDDAL
                     ADIFFGGVNPFSFGFDITVAWGSADILDVDLNAGMNFLQDFVMSLTDLDAVLEFENGS
                     TVDWDFSDLVLTGASAYDADSDGVIEFDLTLDQQADLTNTTSLGFNWGYSVALLQASG
                     GWDFGVDSGSWSEGPLWSTSGSFPIAAIELFNSKFDLNFESQTISFVGNEHPLV"
     gene            complement(9213..10142)
                     /locus_tag="VHN55_04320"
     CDS             complement(9213..10142)
                     /locus_tag="VHN55_04320"
                     /inference="COORDINATES: protein motif:HMM:TIGR03718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC/Alx family metal homeostasis membrane
                     protein"
                     /protein_id="HEX2803191.1"
                     /translation="MPPSSDFGLWIAFAAAATAILIFDFFVLARRPGRLSGARALVMV
                     AIYACIALAFGGLLFLARGRDSGMEYLTGYLLELSLSFDNIFIWILVLKNLSVPDDDQ
                     ETVLFWGILGALVFRAIFIFGGAALLNLFDWMLYVFGAAVIVSGIRLLRSGTPQDVEN
                     SRIMRFAKAHLPVTEDYRGRKFVIRKGSVRCATPLLLALVVIELSDIFFAMDSLPAIF
                     GVTRDTLVIYSSNMFAVIGLRALYFAVAGLMERLRYLHLGLAVLLVMIGAKMIAGDLV
                     EIQIWVTLAATLAIVTATVGLSLAWSRPRRAGV"
     gene            10209..11162
                     /gene="thiL"
                     /locus_tag="VHN55_04325"
     CDS             10209..11162
                     /gene="thiL"
                     /locus_tag="VHN55_04325"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019370741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEX2803192.1"
                     /translation="MDEKEVIDRLRRIATHPAARKLQDDVAVLDDLVITHDSVAEGVH
                     FLGTDPPASVGWKLVAVNLSDLAAKGAEPVGALLSLTLSEEEWDSGVIDGIEAACETY
                     ALPLIGGDTIALPPDAPRVYGLTAIGRAGDRTPSRSDGRPGDRIWIAGTLGDSAAGLQ
                     QLDGDPAATGPLVDIFRRPIPLLEMGQALAPHATAMMDISDGLLVDLERVCGASGCGA
                     EVDLDSLPLSSAFVAERGPLRESRLFAATGGDDYALLTALPADMEPVSLSLPQAPTLT
                     CIGRLVAGSGLKLYDRDGDVPLPERLGYEHRTSAASVDGRR"
     gene            11318..13447
                     /locus_tag="VHN55_04330"
     CDS             11318..13447
                     /locus_tag="VHN55_04330"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEX2803193.1"
                     /translation="MNLTLIAIACGVIALLYGIFTTSQVLGAATGNKRMVEVSDAIQE
                     GAKAYLGRQYVTIAIVGVVVAVLIFFFLGHVQALGFALGAILSGAAGYVGMNVSVRAN
                     VRTAEAARTSLQSGLTVAFRAGAITGMLVAGLALLAISIFFYVLTDMQGLEPNSREVI
                     DALVALAFGASLISIFARLGGGIFTKAADVGADLVGKIEAGIPEDDPRNPAVIADNVG
                     DNVGDCAGMAADLFETYVVTVGATMVLIALLVTGGPGLIGLMSLPLLIGGACIITSII
                     GTYFVRLGRGSIMGALYKGFIVTALLSIPALWAVTTLALGDLNASAGSVTDAAGGVTD
                     FTGWDLFWSMLVGLAVTGLIVWITEYYTGTNHRPVQSVARASQTGHATNIIQGLAVSM
                     EATALPAIVICVGIIVAYSLAGLIGIGFAATSLLALAGMVVALDAYGPVTDNAGGIAE
                     MSGLEDEVRQRTDALDAVGNTTKAVTKGYAIASAGLGALVLFAAYTTDLRRFAGDLGV
                     AYADIDFGLANPYVIVGLLIGALLPYLFGAMGMMAVGRAGGAVVEEVRAQFRDNPGIM
                     DGSSRPNYARTVDLVTKAAIKEMILPSLLPVFAPIVIFFLVRFVAGPEQAFAALGALL
                     IGVIVSGLFVAISMTSGGGAWDNAKKYIEDGNYGGKGSPAHMAAVTGDTVGDPYKDTA
                     GPAVNPMIKITNIVALLLLAALAGHTV"
     gene            13558..15489
                     /locus_tag="VHN55_04335"
     CDS             13558..15489
                     /locus_tag="VHN55_04335"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX2803194.1"
                     /translation="MRLAVAAALAAIVIAPAPVASATAQSTHAAHSAEDFATLPGMSG
                     AKLSPNGQRVATKVAIKGDTYLMILSLNGAKPSLVPSPEGDINWWKWVNDDWLVVGVG
                     DRLQIHAIDEGYVTRALGVSADGKTVIPLLRQVHDLAQNADELIWTAHDGSPRILLSA
                     QRSVLVDEAKFWPEVYEVDVSTGKYSVAVPARQGVYDWIADGSGMVRMGVRVTTSGEQ
                     EKILYRGPEGGRFHEFPGKDSSGQPAPYPSVILADGRAFTIADDQYGFSVLYEYDLKR
                     MALGKAVEKSNGYDLGGYQVDDARTKLLGVYLDEERSTIRWTDPSMKALQAEINALAQ
                     GVNASIISTSRNQDRAIVLFSSPETPGAYFLYDRPTKKLTRMAYVNSAIKMETLNPVS
                     MIRYKARDGLSIDAVLTLPKSGPKTNLPLIVMPHGGPFARDSLSWDWWTQFLADRGYA
                     VVQPNYRGSSGYGTGFTAKGEGEWGLKMQDDLVDAISHLAKQGTIDPKRVCIVGASYG
                     GYAAMRATQRDADHYRCAISYAGVSDLKRLSRSSYGQLFGAKSKAWIKRQAPDLSSVS
                     PINTPQASKIPLLLVHGRKDRRVDVSHSRDLAKALTRAQRDVTYIEQPEADHFFSREA
                     DRLEFLKAMEAFLARHNPA"
     gene            15670..15918
                     /gene="infA"
                     /locus_tag="VHN55_04340"
     CDS             15670..15918
                     /gene="infA"
                     /locus_tag="VHN55_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007163491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEX2803195.1"
                     /translation="MAKEELLEMRGQVVELLPNAMFRVKLENGHEILGHTAGKMRKNR
                     IRVLTGDEVLVEMTPYDLTKGRITYRFMPGRGGPAPRA"
     gene            15929..16498
                     /locus_tag="VHN55_04345"
     CDS             15929..16498
                     /locus_tag="VHN55_04345"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006833526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HEX2803196.1"
                     /translation="MLVLASASPRRLDLLARIGVVPDAVIPAEIDESVPKGELPRDHA
                     LRLAREKAEAVSASKPDALVLAADTVVAVGRRILPKVEDEATLRACMKLLSGRRHRVM
                     TGVALAAPGEPLRTRLVETVIAMKPLSQDEIDHYAGHGEWRGKAGGYALQGYGEVYVR
                     HIAGSYSNVVGLPLAETRNLLKAAGYAIA"
     gene            16491..17477
                     /locus_tag="VHN55_04350"
     CDS             16491..17477
                     /locus_tag="VHN55_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
                     /protein_id="HEX2803197.1"
                     /translation="MPEWVVEKGIGETRAALVDGGRIVEARIELDGTVPAGTILEARL
                     VDNGSSGRNGIARDEDSGTEFLLRHVPREISQGSVVNIEVTRPAIPGPEPWKRPLAKA
                     TRDERRRPRSLAERLRSGDHPVRTVTFPSPRDELAEAGWDHLIEDARSGNVLFAGGSL
                     GIFATPAMTLIDVDGSLPLAELAAAGAGAAASAVRRLDIGGSIGIDLPTVTGKAARQA
                     AAEAIDFILPQPFERTAVNGFGFLQVIRPRNRASLVELAENRSEFEARAVLRRAAVEG
                     SGALRIAAHPSVAALLDSKPSWLEALASQVGGSVTLRSDPSLPIHGAYAEKS"
     gene            17461..17646
                     /gene="yacG"
                     /locus_tag="VHN55_04355"
     CDS             17461..17646
                     /gene="yacG"
                     /locus_tag="VHN55_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEX2803198.1"
                     /translation="MPRSPDSKPCPLCGKPPQPEHAPFCSRGCKDRDLLKWLGEGYRI
                     AGPPAEPGGVDSEDSEG"
     gene            17687..17762
                     /locus_tag="VHN55_04360"
     tRNA            17687..17762
                     /locus_tag="VHN55_04360"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17720..17722,aa:Phe,seq:gaa)
     gene            17970..>18421
                     /locus_tag="VHN55_04365"
     CDS             17970..>18421
                     /locus_tag="VHN55_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803199.1"
                     /translation="MAIGRGVSVWVLDAPHGFGAADYHSHHAIQITVALDGQLSLSTS
                     SESLSSPALAVAADALHRIDGCGFFAFIFVEPESRQGRSLSQALFGKRELVELDNPHL
                     VDLLAPLRRTFEQRVGNEELLAVGRSVIEALAPAADAPLPDARVQRII"
BASE COUNT         3239 a         6059 c         5843 g         3280 t
ORIGIN      
        1 gcgtacatgt ggctcgaagg ctggctttct aagaacaagc tgccgccaca cgtcagcctc
       61 gtgacctgcg cagccgcgcc gtcgctcttc tacgccgact gggtcgaacg gattccggaa
      121 gattgccctc ggctccgcgc gcttcgtgcc gaactgctgt cccttccgtc cgtcaagcgc
      181 tgcgtcgagg aagcgcggcc ctatcgtccc tttttcccgc tcggcgcgcc cgaccgcgat
      241 taagcgaacg ccctcgcctt cttcagtagc tgccaggctt cgatcacctg cccgagcttc
      301 tgttcctggc ttcggtcgcc gccgttgcgg tcggggtgaa agtgccggac gagcttcgaa
      361 tatttctgcc gaaccgagtg caagtcggtg tcctcgccaa gcccgagcac gcccaaggca
      421 cgccgctcct cggggctgaa tcgctgcggc gggccgcggt cggcccggcg gaatcgggcg
      481 gcgatcgcat ccagcggatc ggcaaaatcg ttccacgccg gcatcgggtc ctcgccggcc
      541 ggccgatggc gccggctcgg ccgttcccat cccgccagcg gactttgcgc ttcgttgatc
      601 tcctcggggc tcatcccctc gaaataatta tatttcgaat tgtgatggcg cacatgctcg
      661 aggcacaaca gctggtaggc gcccggaccg tcgaaattgg ccggctggat gggcgcctta
      721 tattcgccga cgcgcttgca gccgggcact gcgcagcgcg ccgtcgctcc ttcgaccttg
      781 ccgtgcatcc tggggtttct cgacgccact cgccttcctc gtacgctgaa cctgtctata
      841 taggaggcat ggacgcactc gccaccggac cggtttcaac ggaaatgcgg cgccggcttc
      901 aatcgcttga cccgaccagg gtcgagctgg tcgacgacag cgaaaagcac cgcggccacg
      961 gtggctacaa tcctgccggc gaaagccact tcacgctgct gatcgagagc ccggccttcg
     1021 cgggcaagtc gcgggtggaa cgccagcgca tggtccacgc agcactcggc gaactcgtcg
     1081 gcgagcgggt tcacgcgctt tcaattcgag cgcgggcgcc gggggaataa ggggcggcgg
     1141 acggcgccgc ccctttgggt tacatcgtga aactgaggcc gaggcggccg ttcacggccg
     1201 tcctgccctg cagctgttcg gcgccgactt cgccgacgag cgacaccgac gagccgccgc
     1261 cgaggatccg aagcgcgccg cgccagccgc tcgtccgctc ttccggcgtg agggtgaacg
     1321 tctcgccgtc tccgaacgaa gcggtggttc ggccgagcga gctgctgagg atctcgcgtc
     1381 gtccgccctg gagctcgagc ctaagccagg ttgcgctctc gtcggtcccg agcagctcgt
     1441 acccgaccgc gagcagcgca ttggcgcccg tttcgttgct cgagcgctcg cgaaccgtca
     1501 ggtccattgc gccgccgccg ccgctctctg tgtacccctt ttcggtcagc ttgatgtagt
     1561 cgatcgacgc cgacggccgg aaagtcaggc gaccggcgcg aagcgtgtag gaaagcccgg
     1621 cggcgcccga atagacgcgg ccgttccact tgccttccgt cgatcgggtc actgttgtcc
     1681 cgtccacttc gccggcgaag ttgcgggtgc tgtcgaagct gacagtgccc gcggccgcgc
     1741 gagcaaaggc acgcaagggg ccggtgccgc cgcgccagta gatgcccccc tcgtaatggt
     1801 cgctgaccag gtcgttggcg gcgacggaat tgcggccggc cacataggcc gcggtgaccc
     1861 cgaccctgcc gatcggcccg agctgccggt cgtacccgcc gctaacgccc catccgccta
     1921 cgtcgaaatc ggcggtcgag ccgatcgatt tcttcgagct ccagccgaac tgctgcatcc
     1981 acagtccgct ttcggtgccg agcgggcgcg gatcgccgag ctgctcggcg gctagccgcg
     2041 tgctcttgct gacggtttcg aatgcgccgc ccgcatgctc cggcatcagc tgctggagcg
     2101 tgcccttgag cgtcgcgctg tcctcgagcg agaggaacac ggcggcgacc gattggtcgg
     2161 agtcgaccgc ggccagcgcc gcgtccagga ccgcggtctc agacgtgttt aggccgagct
     2221 cgcttgcact cttgaacgcc acctgcagcg aaacctggcc gtcagccggc gacgaggcaa
     2281 gcgagctcgt gaacaggtag gggagagtca cgactgagct tgtcaggttc ccagcgccgg
     2341 taagagtgcc ggcatcgacg atcgtgtagg tgccgggcgc cgttgcgacc ttctggaggg
     2401 taacgacgac gttggtgccg gtcccgaaat tcgcttcgcc ggcgaccgtg tacaaggtgt
     2461 ggccggattc gccgatcgtc actccaagct gagcgttagt gcccgtggtc agcgaggcaa
     2521 ggctcaccgc gccaaggttc ctgacgtcga gaaaaccgcc gcttccgacg ttcacggtga
     2581 ctcccgcgct gttgatcagc tgtccccgaa acaccccgcc caagccaaag ctgtcggagc
     2641 cgccgccgaa atcgacattg cccgacacgg tgccggcgga cacgagcagg ctgtcgttcc
     2701 cgcttccgaa caggatgtta ccggtgatca gcggcgctgg cttgccggcc gccgcagcga
     2761 cctgctgcac aacgactccc gaggtgtttg cactgacgtc gatggccgtt ccgcgactcc
     2821 cgagctccga cgcattcgca actcccaggt tgccgctgtt ctcgatgagc gacacggtgc
     2881 ccgatctatc aacgatcgcc gcagccgagc cgtccgtccc agtcaagccg gcagcgatcg
     2941 ttccgctgtt gcgaatggtg ttcacggtcg cgccggaatc gattcggatc gcctgcgctg
     3001 cggtggtttg cgttccgcct ccctgggcgg tcacggtgcc gagcacgttg atcgttggaa
     3061 cagtcgcccc atcgccgatg tggatcgctg tcgcattggc tttcgtagca cttgcctgaa
     3121 cggtgcccga gaggttcatc ccacccgcga tgttcacgct atgcccggca ccgccgatgg
     3181 atacgccggt ccccgcaact ccgctataga ctccgtgccc gccgaccgcg cctttgatca
     3241 ccaggccgaa gccagaggag cccgcgccga ccgagacgtc ctggctcgcc gacccgatct
     3301 tcagcgccgg cgccgccccg aagctggtca ccgacgccgt cgattcctgc gcgtcgggaa
     3361 cgccgtcgtc gtcctcgtcg gtgtcggtcg tgctattgtc ggcaggtcga gcgtcgagca
     3421 ggatgccacc agcgacgttc cccgagacta gcactgccga cccgccctgg agcaggtcgt
     3481 cgctgtcgag cttggacggg tctgccggaa cgcttgtgtt ccgatagccc gtcgccgaga
     3541 cgcctccctg gacgacgacc gaaccgccga cgtttccgcc gaccaggagg ccgaccgaat
     3601 tttgcccctg gaccgaaaca ttcgcgccat tgcccacagt cacgttgccg ctgacggcgc
     3661 tggtacggat cgcaacaccg tcattgccgg ttacggtgat tttgccggtg ttggtgagcg
     3721 acccggttag cgcgctgtcg atcgcgatgc ccgccgattg gttgccttcg accaggattg
     3781 tgccgctgtt gacgacgttg ccggtgtagg tgccgccgcc gaggactcga atgccgaagc
     3841 ggttgttgcc ctgcgcgaac ggtccgtcga gatcgccgtc gttgtcgccg tcggtcggcg
     3901 tgtaattctc gtcgagggtg atggtcccgg tattggtgat gtcgccggca aggccggggt
     3961 tggcgagaat gccggtcgag ccgttggcgc cggtgatggt gatcgtgccc tcgttcttca
     4021 ccttggcgtt gctgttgatg gtgacggccg ctcccgcggt cgttcgcttg atcgagcccg
     4081 ccgacgtgat cctgaggtcg ccggtggtcg aagttacgac cggagtcgtc gttgccgtgc
     4141 tgataacagt ttcggcggca gtggcggggc tggcgagtgc aacagcaatt gcacccatcc
     4201 cgctggtaga aagcaggttg cgcatggaag aatttgccct tttgggacgc ggccggcggg
     4261 cgcccgcagc gtcggattta gatacgccaa cgccggcggg gcaatcgcct cgccggaaca
     4321 agaattcgaa ctgcagtgaa ggtacgaagc tgcggtcgcg gctccgtttt acccccgcaa
     4381 tgagcgcgcc ctaagcggcc ggaaacctga agcccagatg aacgaaaata agtgtctgga
     4441 gatacttaga aattgtgcac aagcttccgc cccgccccga acccgactag gtaatttcca
     4501 tggaatcgac gatcgaaatg agtctcgctc cggtcaccca cgacctcggc gggttcaagg
     4561 tgtaccggac tcttccgcac aagcagcgga ctatggtcgg gccgttcatt ttcttcgacc
     4621 aaatgggtcc ggcgcacctg tcggccggcc aggggatcga tgtgcggccg cacccgcaca
     4681 tcaacctgtc gacggtgacc ttcctattcg ccggagcgat cctccatcgc gacagcctcg
     4741 gcacccgcca gcggattgag cctggcgcgg tcaacctgat gacggcggga cgcgggatca
     4801 cccattccga acgctccccg cccgacgagc gcgccgaggg accgcatcta tccggaatcc
     4861 agacctggct agcgatgcca aggtcgaaag aggaagtcgc gccggggttc gaacacactc
     4921 cggcggcgga cctgccggtc gtcgacgtcg acggagtcga ggtgcgcctg atcatgggcg
     4981 aggcgtgggg agcagtatct ccggtcacct gccattcgcc gacgatttac gcgtcgatgc
     5041 tgatgccggc cggttcgtcg cttgagatcg actgcgacgc cgacgagcgc gctctttacc
     5101 tgctcgacgg cgacatttcg gtcgacggca cgccgctcga accgcagcac ctcgtactgc
     5161 ttgcccccgg tcaccgaccg ttgctcaagt cgaagcaggg cgcccggatg atgctttgcg
     5221 gcggcgctcc gatggacggc gagcgccacg tctggtggaa tttcgtctcg tccagccgcg
     5281 accggatcaa cgaggccaag agagcctgga aagcgggcga gttcgcgctt ccccccgacg
     5341 acaatgacga gttcatcccg cttcccgaga ttccgatgac ggtaagctat ccgtgaccga
     5401 attcaggctg gtcccgctgt cgaccgggat cagcctgaat gtcgccctcg acgggccgcc
     5461 tgacgcaccg gcggtgattc tgctccacgg cttccccgaa tcgcatcgca cgtggcggga
     5521 gatcgcgccg cggcttcgcg accgcttccg gctgatcatg cccgaccagc gcggctttgc
     5581 cggctccgac cggccgcagg acgtgaattc ctacaagccc gcaaggctcg tcgaggacgt
     5641 gttcgccctt gccgattttt tcgggctcga aagcttttcc ctggttggcc acgactgggg
     5701 cggcgccgtt ggctgggcgt ctgcgattcg caaggacccg cggctggcga ggctggcggt
     5761 cgtcaactca ccgcacccgt tgatctttca aaaaagcctg gtcgaagtcg cggagcaaag
     5821 atcggcgtcg cagtacatcg ctgccttccg gacactcgga ttcgagaagc tcgtcgaggc
     5881 aaagggcttc gagtggttct tcgagaagac tttttccggc cacgtcgaca cggcgctgat
     5941 ccccgagccg gagaagcggc aatatatcgc cgaatggtcg cagccgggcg cactcactgc
     6001 catgctcaac tggtaccgcg cgtcaccgct cgtcgtcccg ccgcccggcg tgacggtgcc
     6061 gctgcccgac gcgctgctca agctttcaag caccgtcgaa atcccgacgc tcgtgatttg
     6121 gggaatcaag gacaaggcgc tgctaccggt ccagctcgac ggtctcgaca aggtcgtcac
     6181 cgacctgaag gtccaccgga ttgctgacgc aggccacttc gtcccgtggg aggctccgga
     6241 cgaagtggcc gccgctcttt ccgactttct tcgctaacgg agcgagaccc tttgcgacgc
     6301 ccgcggggcg cgtgctgcaa tcgcgctggc gaaaaatgca gctcgaggct ttccactgga
     6361 gcgtgcccgc cgctacaggc gtcgcgatga agaccgctgc ccgctcccgt tcgcgctctg
     6421 ccgcccggct atcggcagtc caggcgctat accagagaga gatggaaggc acgcccgtgc
     6481 cccgcctcct caaggaattc cacgaccatc gtcttggagc gacgatcgag gaccagcagt
     6541 atcacgaggc cgagcgcgag ttcttcgacg atatcgtcgc cggagtggaa gcgcggctga
     6601 gcgatatcga caaggcgatt tcggcgaagc tcgccagcgg ttggaccctg gagcggctcg
     6661 accgcccgat gcgcgcgatc ctgcgcgccg gcacctacga gctaatcgcc cgcgccgatg
     6721 tcccagtcgg ctccgtcatc tccgaatatg tcgacgtcgc ccatgccttc tacgacaagc
     6781 gcgagagcgg cttcgtaaac ggcctactcg acgccatcgc gaaagaggtg cggcactagg
     6841 ccgcgctccc tgcgactggg cgtcgcaatc agaccagcgg gtgctcattg cctacgaagc
     6901 tgatcgtctg ggactcgaaa ttgaggtcga acttgctgtt aaataattcg atcgccgcga
     6961 tcgggaagct gccgctcgtg ctccacagcg gtccttcgct ccagcttccg gaatcgactc
     7021 caaagtccca gccgccgctg gcctgcagca acgcgacact ataaccccag ttgaagccga
     7081 ggctggtcgt gttggtcagg tctgcctgct ggtcgagcgt aaggtcgaac tcgatgacac
     7141 cgtcggaatc cgcatcatat gccgacgcgc cggtgaggac gagatcgctg aagtcccaat
     7201 cgacggtcga gccgttctcg aattccagaa ccgcatcgag gtccgttagc gacatcacga
     7261 agtcctgaag gaaattcatt ccggcattga gatcgacgtc aagaatgtcg gcactgcccc
     7321 aggcgaccgt tatgtcgaaa ccgaagctga aggggttgac gcccccgaag aagatatcgg
     7381 caagagcatc gtcgacgtcg aggccgaggt cgaagaaatt gttgctttca cccgacgagg
     7441 tgaagttgct cccggtcgtc gagaccaggc tggtcgtatc cacatccggc cacgcaaggg
     7501 tgatcgagag gccgtacggg aactcgaact ccagcgagag atcctcgctg tcaacagtaa
     7561 ggagattcac cgtgaagttg ttcgagcttc cgaacgagaa aaggtcgtag gaatcgacct
     7621 cgaaatcgat cccgagcccg gcactgatcg cgtagttgaa aatgaagtcg aggacgtagc
     7681 ttccacccgg gccggtcgtc gagaaggtga cgccagacga catcaaatcg gtgaacgact
     7741 cgatcaacat gacgtcggtc gtgtggttgt aggtggtgtc tattccgacg ttccacggcg
     7801 cttcggcatc gatcgagccg gcgtcgaacg tcagcgtcga ttgcagcccg gccttcaggt
     7861 agaggtcggc atagccgtaa atgaagccac cgctggtcgc ttcaggcggg tcgaaggtga
     7921 agccgatgaa gcggtcgtcg acgatctgga atgcgtcgcc ggcgttccag atgctctggt
     7981 cggtcgctgt gaagttcaac gagaagtcgt tcgagttcga gtcgaccagg actccgacgg
     8041 aatcggttgt cgtcgcctcc gacccgttcg actgctcgcg cgacaccgcg gtcactgtga
     8101 aatcgaaatc gaagtcggta ttcgcagcga gctcgacaac gaacgtccgg gtcaaggtcc
     8161 cgccggtgct cgagggatcg tacagaagat cgccttcgcc gacgaccgag gcgccgtcag
     8221 gaagccccga aaagacgaag cggtcgatat attcggatcc gtcggtgtcc gtcaccgcgg
     8281 cgctgaccgt tactgcgata tgattgacgt cggctcctgc ggccgttgtc aaagtaagcg
     8341 tcggcgcgtc cgcgaccgca gcgacggcaa tggccgcgac tgtgtcatcg ccgcctccgt
     8401 gcccgtcgat catgctgtag ccgaagctgt cggcgccgct gtaattcgcg tccggcgtgt
     8461 agatgatccg agtcccgtcg tccgaaatcg tcgcggtgcc atgttccgga tcggtgaccg
     8521 agacgattcg gaaatctccg gtcccgtcag catcggtgtc attggcgagg acatcgaaca
     8581 caatcgtctc gtcctccgtc gcgtcgaaac tgtcggcgat cgcatcggga gcggccggag
     8641 cgatttcgac gagtttgggc ggcgcaccgc ttccctgcag gcgaaccccg aagtcgacga
     8701 gagacaagag gtcgagagtg aggggtcctg tcgttgagga aaggataaag ttggtcgagg
     8761 tgaccattcc gaagccgtgg cccgcggttc cgaactcaac gccgacatcg aacggttgcc
     8821 ggccgccgcc gtgcatgttg acgccgtggc ctaggttcat gacgctttca tcgccggtct
     8881 ggaacgacgt gatgtcgatg ccgctgacct gaagcgagga aagcagcgcg ggatccgtca
     8941 cgtcgaagaa cagcccgcga atatcgatgg gcccgccaac tgacgtaagc cgcaccagga
     9001 tggtgccgtc gggctgctct tccatatgga cttggatgtc gatggcggcg ccatccagcg
     9061 cgaagtcgat gtaacgcatg tttacccccc aaggccccca ccttgcggtc gagtcggccg
     9121 cgaaacgttc gtacgtggtt aactttagtt aagcaacacc cgctaaatgg cgagtgacct
     9181 gaaaccggac aacggccgga tgctgcgctc cgctagacgc cggcccgcct cggcctgctc
     9241 caggcgagcg acaagccaac cgtggcggtc acgatcgcca gggttgcggc gagcgtcacc
     9301 cagatctgga tttcaactaa gtcgccggca atcatcttgg ccccgatcat caccaacagc
     9361 acggcaaggc cgaggtgcag gtaccggagc cgctccatca gtccggcgac cgcgaaatag
     9421 agcgcccgca agccgatcac cgcgaacatg ttggagctgt agatgacgag cgtgtcgcga
     9481 gtgacaccga agatcgcggg caggctgtcc atcgcaaaga agatatcgct caactcgatt
     9541 acgacgagcg cgagaagcaa tggggtcgca catcgcaccg atcccttgcg aattacgaac
     9601 ttgcggcccc gatagtcttc cgtgaccggc aggtgcgcct tggcgaagcg catgattcgg
     9661 ctgttttcga cgtcctgcgg cgtcccgctg cgaagcaagc ggattccgct gacgatgacc
     9721 gcggcaccga aaacgtagag catccagtcg aacaggttca gcagtgcagc gccgccgaaa
     9781 atgaaaattg cccggaacac gagggcgccc agaatccccc agaacagcac cgtttcctgg
     9841 tcatcgtccg ggacgctgag atttttcagg acgaggatcc agatgaagat gttgtcgaag
     9901 ctaagactca gctcgagcag gtaaccggtg agatattcca ttccggaatc gcgcccgcgc
     9961 gcgaggaaca ggaggccgcc gaacgccagc gcgatacagg cgtaaattgc gaccatgacg
    10021 agcgcgcgag cgccactcag ccgtcccggc cgccgcgcca gcacgaagaa gtcgaaaatc
    10081 aggattgcag tggccgcggc ggcgaaggcg atccagaggc cgaagtccga cgaagggggc
    10141 atttggcggc aacacgcctg cccccgcgaa ggttgcgcgc ggcttcgccc ttccccatca
    10201 gggaagcaat ggacgaaaag gaagtgatcg accgcctgcg ccggatcgcg acccatcccg
    10261 ccgcccgcaa gctgcaggac gacgtggcgg ttctggacga tctcgtgatc acccacgaca
    10321 gcgttgccga gggcgtgcat ttcctcggta ccgatccgcc cgcaagcgtg ggctggaaac
    10381 tggtcgccgt gaacctctcc gatctcgcgg caaagggcgc cgagccggtc ggcgcattgc
    10441 tttcgctgac actttccgag gaagagtggg acagcggcgt aatcgacggg atcgaagcgg
    10501 cctgcgagac ctatgctctg ccgctgatcg gaggcgacac gatcgcgctg ccgccggatg
    10561 cgccgcgagt ttacgggctg accgcgatcg gccgcgccgg agacaggact ccaagccgtt
    10621 ccgacggcag gcccggcgat cgaatctgga tcgccggcac gctcggcgat tccgctgccg
    10681 gcctgcagca gctcgatgga gacccggccg caaccggccc gctggtggac atcttccgcc
    10741 gccccatacc gctgctcgag atgggccagg cgctggctcc gcacgcgact gcgatgatgg
    10801 acatttcgga cgggctgctg gtcgatctcg agcgagtctg tggagcaagc gggtgcggag
    10861 ccgaagtcga tctcgattcg ctgccccttt cgagcgcgtt cgtggccgaa cgagggccgc
    10921 tacgtgagtc tcgcctgttc gccgcgaccg gaggagatga ctatgctctc ctgaccgcgc
    10981 ttcccgccga catggagccg gtaagccttt ctttaccgca agcgcccacg ctgacctgca
    11041 tcgggcggct cgtcgccggc agcggattga agctctacga ccgcgacggc gacgtgcccc
    11101 tgccggaaag gctgggctat gagcatcgga cttcggctgc gtcagtggac ggtcggcgtt
    11161 agcggcctcg ccttcggcat ggccgccgct ctgctactcg ttcgctgaac caatccaagc
    11221 agttgccagc cgcgcgactc ggccataaag gagcgcgcaa cctgccggca gcacccgcac
    11281 gccggccgtc actctttgcc gccaaacggg gatggaaatg aacctcactt tgatcgcgat
    11341 cgcctgtggc gtgatcgcct tgctctacgg catcttcacc accagccagg tcctcggagc
    11401 agcgaccggc aacaagcgga tggtcgaagt ttccgacgcg atccaggaag gcgccaaggc
    11461 ctacctcggt cgacagtatg tcacgatcgc gatcgtcgga gttgtcgtcg ctgtcctgat
    11521 cttctttttc ctcgggcacg tccaggctct tggcttcgcg ctcggcgcca tcctttccgg
    11581 cgctgccggc tatgtcggga tgaacgtttc cgttcgcgcc aacgtccgaa ccgcggaagc
    11641 cgcccgaacc agcctccaga gcgggctcac cgtcgcgttc cgcgcgggcg caattaccgg
    11701 catgctcgta gccggtctcg cacttttggc gatctccatc ttcttctacg tgctgaccga
    11761 catgcagggc ctcgagccca acagccgcga agtcatcgac gcgctcgtcg ctcttgcgtt
    11821 cggagcctcg ctgatctcca tcttcgcccg tcttggcggc ggtatcttca ccaaggccgc
    11881 cgacgtcggc gccgacctgg tcggcaagat cgaggccggg attcccgagg acgatccccg
    11941 caacccggcg gtgatcgccg acaacgtcgg cgacaatgtc ggcgactgcg cgggcatggc
    12001 cgccgacctg ttcgagactt atgtcgtcac cgtcggcgcg acgatggtgc tcatcgcgct
    12061 gctcgtcacc ggcgggcccg ggctgatagg cctgatgagc ctgccactgc tgatcggcgg
    12121 cgcctgcatc atcacctcga tcatcggcac ctatttcgtt cgccttggcc ggggctcgat
    12181 catgggcgcc ctgtacaagg gcttcatcgt caccgcgctg ctgtcgatcc cggcgctttg
    12241 ggctgtgacc accctcgccc tgggcgatct caatgcgtcg gccgggagtg tcactgacgc
    12301 cgccggcggg gtcaccgatt tcaccggttg ggacctgttc tggtcgatgc tggtaggcct
    12361 cgcggtcacc gggctgatcg tctggatcac cgaatattat accggcacca accaccgccc
    12421 ggtgcagtcg gtcgccaggg cctctcaaac cggtcacgcg accaacatca tccagggcct
    12481 cgccgtcagc atggaggcca ccgctcttcc cgccatcgtc atctgcgtcg gaatcatcgt
    12541 cgcctacagc ctcgccgggc tgatcggaat cggcttcgct gcgacctcgc tgttggcgct
    12601 tgccggaatg gtcgtcgccc tcgacgccta cggtccggtc accgacaatg ccggcggaat
    12661 cgccgaaatg tcgggactag aggacgaagt ccgccagcgc accgacgcgc tcgacgcggt
    12721 cggcaacacg accaaggcgg tgaccaaggg ctatgcgatc gcttcggcgg gcctcggcgc
    12781 gctggtgctg ttcgcggcct acacgaccga ccttcgccgc ttcgccggcg acctcggggt
    12841 cgcttatgcc gatatcgatt tcggcctggc caacccgtac gtgattgtcg ggctgctgat
    12901 cggagcgctg cttccctatc tgttcggggc catgggcatg atggcggtcg gccgcgccgg
    12961 tggcgccgtc gtcgaggaag tacgcgccca gttccgtgac aacccgggaa tcatggatgg
    13021 gtcgtcgcgt ccgaattatg cccgcacggt ggacctcgtc accaaggcgg cgatcaagga
    13081 aatgatcctc ccgtcgctgc tgcccgtgtt cgctccgatc gtgatcttct tcctcgtccg
    13141 cttcgtcgcg ggtcccgagc aggccttcgc cgccctgggc gcactgctga tcggggtgat
    13201 cgtctccggc ctgttcgtcg ccatctcgat gaccagcggc ggcggcgcct gggacaacgc
    13261 caagaaatat atcgaggatg gcaattacgg cggcaagggc tcgccggccc acatggccgc
    13321 ggtgaccggc gacaccgtcg gcgaccccta caaggacacc gccggcccgg ccgtgaatcc
    13381 gatgatcaag atcaccaaca tcgtcgccct tctcctgttg gcggcgcttg ccgggcacac
    13441 ggtctgaagc gacttttcac ggtacgacaa aagcccccgc ccggcctcgg ccgcggcggg
    13501 ggtttttctt tatcgattaa ccggttaagc tgcgtccgcc gaagaaatgg ggggtacatg
    13561 cgtttagccg ttgccgctgc actcgcagcg attgtcattg cgcctgcgcc agttgcgtct
    13621 gcgacggccc agagcaccca cgcggcgcac agcgccgaag atttcgcgac attgccggga
    13681 atgtccggcg ccaagctttc gccaaatgga cagcgggtcg cgacaaaggt tgccatcaag
    13741 ggcgacacct atttgatgat cctgtcgctg aacggggcga agccgtcgct ggtcccgtct
    13801 cccgaagggg acatcaactg gtggaaatgg gtcaacgacg actggcttgt cgtcggggtt
    13861 ggcgacaggc tccagatcca cgcgatcgat gaaggctatg tcactcgcgc cctcggggta
    13921 agcgcggatg gcaagaccgt cattcccctg ctccgccagg tccacgatct cgcgcagaac
    13981 gccgacgagc ttatttggac cgctcacgac ggcagcccgc ggatcttgct gtccgcccag
    14041 cgctccgttc tcgtggacga ggcgaaattc tggccggagg tctacgaagt cgacgtttcg
    14101 acgggcaagt acagcgtggc ggtcccggcg cgccagggag tctacgactg gatcgccgac
    14161 ggctccggaa tggtccggat gggggtccgc gtcaccacgt cgggcgagca ggagaagatc
    14221 ctctatcgcg gtcccgaggg cgggaggttc catgaatttc ccggcaagga ttcgtcgggg
    14281 cagcccgctc cttacccgtc cgtgatcctg gccgacggcc gtgctttcac gattgccgac
    14341 gatcaatacg gcttttcggt gctgtatgaa tatgatctca aacggatggc gctcggcaag
    14401 gctgtcgaga agagcaacgg atatgacctc ggcggatacc aggtcgacga tgcgcgaacg
    14461 aagctgcttg gcgtgtacct cgacgaggaa cggtcgacga tccgctggac agacccgtcg
    14521 atgaaggcgc ttcaggcaga gatcaacgcc ctcgcgcagg gggtcaacgc ctccatcatt
    14581 tccacgagcc gaaaccagga tcgcgcaatc gtgctcttct cgtcgccgga aacgccaggg
    14641 gcttattttc tctacgaccg gcccaccaag aaactcacgc gcatggccta tgtgaattcg
    14701 gcgatcaaaa tggagacgct gaacccggtc agcatgatcc gctacaaggc ccgcgacgga
    14761 ctttcgatcg acgcggtgct gacgcttccg aagtccggtc cgaagacgaa cctgccgctg
    14821 atcgtcatgc cgcatggcgg gcccttcgct cgcgacagtc tctcgtggga ctggtggacc
    14881 cagttccttg cggacagggg atatgcggtc gtccagccca actatcgggg ctcttcgggc
    14941 tacggcaccg gattcaccgc caagggtgag ggcgaatggg ggctgaaaat gcaggacgac
    15001 ctcgtcgatg caatttccca cctcgccaag cagggcacga tcgatcccaa gcgagtctgc
    15061 atcgtcggcg cctcctatgg cgggtatgcc gcgatgcggg ccactcagcg cgacgccgat
    15121 cattaccgtt gcgcgatcag ctacgcgggc gtcagcgatc tcaagcgatt gtcgcgctcg
    15181 agctacggcc agctgttcgg agccaagtcc aaggcgtgga tcaagcgcca ggcgcccgac
    15241 ctcagctcgg tttctccgat caacacgccg caggcaagca agataccgtt gctgctggtt
    15301 catggccgca aggatcggcg ggtggacgtc tcgcacagcc gcgacctcgc caaggctctc
    15361 acgagggctc agcgcgacgt tacctacatc gagcagccgg aagcggacca tttcttctca
    15421 cgggaagccg atcggctcga attcctcaag gcaatggagg ccttcctggc gcggcacaat
    15481 cccgcctgac gagatgccgg cctggcccgg ctccaatcct gccccgcgcg gcctcggccg
    15541 tcgcggggca cttttcgaca gcttccgtca ccccggcggg gccaatgacg atctggggct
    15601 cgtcgcttca ctttccgaag ccgtgccgct aaggcaccgc gactttcaca cagaggaaga
    15661 ggacacagtt tggccaaaga agaacttctc gagatgcgtg ggcaagtcgt cgagctattg
    15721 cccaacgcga tgttccgcgt gaaactcgag aacggccacg agatcctcgg ccataccgcc
    15781 ggcaagatgc gcaagaaccg aatccgcgtc ctgacgggcg acgaagtgct cgtcgaaatg
    15841 accccgtacg acctgaccaa gggccggatt acctaccgct tcatgcccgg acgcgggggc
    15901 ccagcgccgc gcgcctaggt tcggcttgat gctggttctc gcctcggcca gcccgcgccg
    15961 cctggacctc ttggcccgaa taggcgtggt gcccgacgcg gtcatccccg ctgaaatcga
    16021 cgagagcgtc cccaagggcg agctgccgcg ggaccacgcg ctccgcctcg ccagggaaaa
    16081 ggccgaggcg gtttccgcga gcaagcccga tgcgctcgtt ctcgccgccg ataccgtcgt
    16141 cgccgtcggc cgccgaatcc tgccgaaggt ggaggacgaa gcaacccttc gcgcctgcat
    16201 gaagctgctg tcgggccgtc gccatcgggt gatgacgggg gtcgcgctgg ctgcccccgg
    16261 cgagccgctt cgcactcgcc tcgtcgaaac ggttatcgcg atgaagccgc tctcccagga
    16321 cgagatcgac cattacgccg gccacggcga gtggcgcggg aaggccggcg gctatgcgct
    16381 tcagggctat ggcgaggtct acgttcgtca catcgccggc agctattcca atgtggtcgg
    16441 tctcccgctc gccgagaccc gcaacctgct caaggccgcc gggtacgcca ttgcctgagt
    16501 gggtcgtcga aaagggaatt ggcgagaccc gcgcggcgct cgtcgacggc ggccggatcg
    16561 tcgaggcgcg gattgagctt gacggcacgg tcccggccgg cacgatcctg gaggcgcggc
    16621 tggtcgacaa cggaagcagc ggccgcaacg gcatcgcccg cgacgaggac agcgggaccg
    16681 agttcctgct ccgccatgtc cctcgcgaaa tcagccaggg ctccgtcgtc aacatcgagg
    16741 tcacgcgccc ggcgatcccg gggccggagc cgtggaagcg cccattggcc aaggctaccc
    16801 gcgacgagcg gcggcggccc cgctcccttg ccgagcggct gcgctcgggc gaccaccccg
    16861 ttcgcacggt aacctttccc tcgccgcggg atgaactggc ggaagccggc tgggaccacc
    16921 tcatcgaaga cgcgcgaagc ggcaatgtcc tcttcgccgg cgggagcctt ggaatcttcg
    16981 cgaccccggc gatgaccctg atcgacgtcg atggcagctt gccccttgca gagcttgcgg
    17041 cggccggtgc aggtgccgcc gccagcgccg tccggcgcct cgacatcggc ggctcgatcg
    17101 gaatcgacct tccgaccgtg accggaaagg cggcgcgcca ggcggctgcc gaggccatcg
    17161 acttcatcct tccgcagccg ttcgagcgca ccgccgtcaa cggcttcggc ttcctgcagg
    17221 tcatccgccc gcgcaatcgc gcgtcgctgg tcgagctggc cgaaaaccgt tcggagttcg
    17281 aggcgcgcgc cgtacttcgg cgagcggctg tcgagggaag cggagccctt cggatcgccg
    17341 ctcatccctc ggtcgccgcg ctgctggaca gcaagccctc gtggctcgaa gccctcgcca
    17401 gccaggtcgg cggctcagtc accttgcgtt cggacccgtc gctccccatc catggcgcct
    17461 atgccgagaa gtcctgactc gaagccctgc ccgctgtgcg gcaagccgcc gcaaccggag
    17521 catgcgccat tttgctcacg cggctgcaag gaccgcgacc tgctgaagtg gctcggcgaa
    17581 ggctatcgaa tcgccggccc gccggcggag cctggcgggg tggacagtga agatagcgag
    17641 gggtagggag cgcgtcgctc gacgggccgc ccggcccgag gtgaatgccc aggtagctca
    17701 gttggtagag cacgtgactg aaaatcacgg tgtcggcggt tcgattccgt ccctgggcac
    17761 cattctcgcg cacaggatgc gcggggcgca tccgagcacg agaatccgag cgtagcgaga
    17821 tcgctaccgc agcccagtcc ggggcactgg cgaagccgaa aatccgagcg aagcgaggtc
    17881 gcagccagcc aagcccgagc tttttaacac cagtgcaacc ccggcttcct ttcgtgtagc
    17941 ttcggcgcat ggcgacaggt gtagccaaaa tggccatagg ccggggcgtc agcgtgtggg
    18001 tgctcgatgc gcctcacggc ttcggcgccg ccgactatca ctcgcaccac gccatacaaa
    18061 ttaccgtcgc cctggacggg cagctgtcgc tgagcacaag ctcggagagc ctcagttcac
    18121 ctgcactggc ggtcgccgca gacgcgcttc accggatcga cggctgcggc ttcttcgcgt
    18181 tcatcttcgt cgagccggag agccgccagg gccggagcct ctcgcaagca ttgttcggca
    18241 aacgcgaatt ggtggagctg gacaatccgc acctggtcga cctgctggcg ccgctccgcc
    18301 gcaccttcga gcagagggtc ggcaatgagg aacttcttgc tgtcggccgg tccgtgatcg
    18361 aagccctggc gccggcggcc gacgcacccc tgccggatgc acgcgttcaa cgcatcatcg
    18421 a
//
LOCUS       DATAKH010000105         9205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_37128,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000105 DATAKH010000000
VERSION     DATAKH010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9205
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37128"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..500)
                     /locus_tag="VHN55_04370"
     CDS             complement(99..500)
                     /locus_tag="VHN55_04370"
                     /inference="COORDINATES: protein motif:HMM:NF036854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEX2803200.1"
                     /translation="MKVSSATSATATEPPPPADPSSARQPSLTTAEFSLSGPSEHPDP
                     STHAYRKDLADLALAGRVIASHYAEPLPRSVATGAELRSAPEETSEILRQLNAGEPFE
                     ILENSLGWAWGYAGSERIVGYVRSEALAPPA"
     gene            complement(406..783)
                     /locus_tag="VHN55_04375"
     CDS             complement(406..783)
                     /locus_tag="VHN55_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX2803201.1"
                     /translation="MADESLSAWMRALIAYVRSGEPDLTNRQMALLMLVYLTPGPHTV
                     RGLAKVLGVSKPVVTRALNTLGGLGYLRRERDQDDRRNVFVVRTKDGADFLEGFKRNL
                     RDSDRAAAASRPIIGQAAFAHHR"
     gene            complement(904..2304)
                     /locus_tag="VHN55_04380"
     CDS             complement(904..2304)
                     /locus_tag="VHN55_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HEX2803202.1"
                     /translation="MTDFAPLLTADRGQKAHAIHLVDKDSFPEWAKTRPAEDRALLEA
                     HRFDGKTGYASVILPRGGNDFEVVSAVATVNSLSPWCMAKLPDVLPEGSYRLAAGAPG
                     KAALGWLLAQHRFDAFKSKSDEPEKGPRVLVTGEAAAIDAAVRLADATALVRELVNTP
                     AIRLGPAELEEAARDRLATANAEIRVTGGDELRQNYPLIAAVGGAATADRAPRLIEAE
                     WGDPKHPRVAVVGKGVCFDSGGLDIKGATGMRLMKKDMGGGAHALALAWLVASARLPV
                     RLHLLIPAVENAVSGASIRPGDIVKSRKGLTVEIDNTDAEGRLVLADALARAAELEPE
                     LIIDFATLTGAARVALGPDLPALFVNDEDLAAAIEDSAKAVDDPVWRMPLWEAYGDML
                     KSDIADVANACGSPMAGAITAAMFMKRFVPDGIAWAHLDTFAWREAAKPGRPKGGDAL
                     GLRAVFEALQKRFSLP"
     gene            2426..4282
                     /locus_tag="VHN55_04385"
     CDS             2426..4282
                     /locus_tag="VHN55_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEX2803203.1"
                     /translation="MKLSLPFASLLLATTAACTAVAPPPTAAVPVAVDAQAPAPVSPA
                     AEDQRLMAFLDAAFEEQAARSPQFLTALGRKDQYDRLSNYTDEYRQQGLELEKRQLAQ
                     LRAQFDLQNLTPAGRLSYRLFEKEVEDDIAGFRWRWHGFPASTNGSPAGSIPVFLINQ
                     HRIDSVADAEAYVARLRDVERVMNEITGNMRRQAAMGIVPSRFNFEPVRADARRVLAG
                     APIAQGKDTPVFADFKSKVGKLDIPQAEKDRLVAQAQGALTGPFHRGYQTFLETWNEL
                     EKQSQGNRGAWSLPDGGAYYENRLEQSTTTQLTADQIHHIGLQQVARIHAEMERIKNQ
                     VGFKGTLQQFFKHIVASPEFKYPNTDSGREQYLADARRYIDQVMAAAAQWFARLPKAP
                     LEVRAVEQWRQETAAVAFYNSPSEDGSRPGIYYVNLADMNQVLKPQIEAISYHEGAPG
                     HHFQIALAQELPNVPKFRRFGGYGAYSEGWGLYAEGLGKEMGFYQDPISEFGMYSTQL
                     WRAVRLVVDTGIHSKRWSREQAIQYFLANALLSERDATKEVERYFNWPGQATSYMVGQ
                     LKILELRDKARAALGEKFDIREFHGAVLENGAVPLDVLEELVDSYIASKKTT"
     gene            complement(4341..5732)
                     /locus_tag="VHN55_04390"
     CDS             complement(4341..5732)
                     /locus_tag="VHN55_04390"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX2803204.1"
                     /translation="MLKFFLALLAAVAAPLAAQPLTPAEIARIDQVVAKRLAETAVPS
                     AEVAVVRGGEIVLNKAYGKANDGLPATPGLPYQIASNSKQFTAMALLLLEDDGKLDLD
                     DPVAKYFPDVSGADKITLRHLLSHTSGLQDYWPQDYSFAAMAKPVTPQAIVDRWAKKP
                     LDFQPGEQWQYSNTGYVIAGMIAEKVSGEPLMRFLKRRIFDPLGMTSVVSQDDAVGPR
                     YPSGYGRYALGPVRPVTPAAPGWLYAAGELSMTAEDLAKWDIARMNRALLPPDDWAEQ
                     ETTVKLNDGTDTRYGLGVYVRDVNGRKVVSHGGESVGFLSTNAVYLDQKAAIAVFTNS
                     WSGGAYGRISRDIAKIVLPPAPQDAEAAAAAAKARQVYDQLRGGRLDRSLLTDNANYY
                     FTEQAIADFRSSLAPLGEPTAFEPSGNPVLRGGFVIQHYTIEYAGRTLDLSTFYEPGA
                     NGRIEQFLVSPGE"
     gene            6140..6520
                     /locus_tag="VHN55_04395"
     CDS             6140..6520
                     /locus_tag="VHN55_04395"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX2803205.1"
                     /translation="MKALNDLAAKAADAAALLKSLANEQRLLILCHLATQGELSVSEL
                     GERLELSQSALSQHLARLRQERLVTFRRQSKTIHYKVSDPMAEDVLALLSDLFCPELA
                     QPVTESSASRSIPGRGRARGGGKG"
     gene            6517..7452
                     /locus_tag="VHN55_04400"
     CDS             6517..7452
                     /locus_tag="VHN55_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008830447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2803206.1"
                     /translation="MTESDPVLDIAFDQVRRTGSGDSSRPEVTSFFHEPTFTASYVVA
                     DPATGHAAIVDSVLDFDEKSGRTSTTAADAIIDLVTDRGLTVGWLLETHAHADHLSAA
                     PYLQEKLGGKIAIGRDITAVQNVFGDVYNEDSRFRRDGSQFDHLFGDGDSFSIGNVAA
                     IALHVPGHTPADMAYVIGDVAFVGDTMFMPDYGTARADFPGGDARQLYRSIRRLMRLP
                     DETRVFLCHDYKALPNRTHFAWETTIGAERTGNVHVHEGVSEDEFVAMRTARDATLDM
                     PNLILPAVQVNMRAGHLPEPEDNGTRYLKLPLNAL"
     gene            7452..7889
                     /locus_tag="VHN55_04405"
     CDS             7452..7889
                     /locus_tag="VHN55_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HEX2803207.1"
                     /translation="MLEPLSPLYALAGGLLIGTATALFLLLSGRIAGVSGLAAAAARI
                     ADRGPEWSQAASFVIALPIGALIVSAFLRAPQVSMTSSLPLLIAGGMLVGFGTRLGNG
                     CTSGHGVCGMARLSPRSIAATAMFMAFGFATVYVIRHVVGAAA"
     gene            7886..8329
                     /locus_tag="VHN55_04410"
     CDS             7886..8329
                     /locus_tag="VHN55_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013831621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEX2803208.1"
                     /translation="MRHILPGIVVGLLFGAGLALSDMVNPARVLAFLDIAGNWDPTLA
                     YVMAGAVVPSAFGYWLSRRMRRPLLGHEFRIPPNRVVDPQLLAGAAVFGIGWGLVGLC
                     PGPAFAALAFNLWQPWLFVIAMVGGMVLHRVYRDWIAQPRQPADA"
     gene            8326..9114
                     /locus_tag="VHN55_04415"
     CDS             8326..9114
                     /locus_tag="VHN55_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003044361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2803209.1"
                     /translation="MTLTLVQYLLGIGSGALVGFVLGLVGGGGSILAVPLIVYLVGVR
                     DAHVAIGTSAFAVAANAATGLVHHARSGHVKWRCAGLFAVAGIAGAAMGSTLGKNFDG
                     QRLLFLFALVMIAVGVLMLRRRASFGNPDVKLGRENAGKLVGYGLGAGAFSGFFGIGG
                     GFLIVPGLTAATGMSMISAVGSSLVAVTAFGLTTALNYALSGLVDWPLALAFIAGGLA
                     GSIFGTRLAKHLTKSRDRLSAVFAALIFAVAAYMLWKSYAAAWG"
BASE COUNT         1557 a         2998 c         2993 g         1657 t
ORIGIN      
        1 cgcgctccga ggcgcgactg ggcggtcggg ctgttgatcg gggtgctgat cgcgacgagc
       61 ttgtaccagc taatctggct gcaagccgcc gtggtaagct aggccggggg cgccagggct
      121 tccgatcgga cgtagccaac gatgcgctcg gagccggcat agccccaagc ccagccgagg
      181 ctgttctcca gtatctcgaa cggctcgccg gcattgagct ggcgcagaat ttccgatgtc
      241 tcttccggag ccgagcgaag ttcggcgcct gtcgcgaccg acctcggcag cggctcggcg
      301 taatgcgacg cgatcacccg gccggcgagc gcgaggtcgg cgagatcctt gcgataggcg
      361 tgagtcgaag ggtcggggtg ctcggacggt ccgctaagcg agaattcagc ggtggtgagc
      421 gaaggctgcc tggccgatga tgggtcggct ggcggcggcg gctcggtcgc tgtcgcggag
      481 gttgcgcttg aaaccttcaa gaaaatcggc cccgtccttg gttcggacga cgaacacgtt
      541 gcggcggtcg tcctggtctc gttcgcggcg cagatagccg aggcctccaa gcgtgttcaa
      601 ggcgcgcgtg accaccggct tcgatacacc gagcaccttg gcgaggccgc gcaccgtatg
      661 cgggcccggc gtcaggtaca cgagcatcaa cagcgccatc tggcggttcg ttaggtcggg
      721 ctctcctgat cggacatagg cgatcagtgc ccgcatccag gctgacagcg attcgtcggc
      781 cattgctgca ccatctcccg cgcatcgcgc acttgaccgt taaaccggca aggagaggaa
      841 ttgttgcagg caagtaaccg catttcggcg gaaaaatccc gccgtacccc ggaaaatcgc
      901 cgttcagggc aaggaaaatc gtttttggag cgcctcgaac acggccctga ggccgagcgc
      961 gtcaccgccc ttgggccggc ccggcttggc ggcttcgcgc caggcgaacg tatcgagatg
     1021 cgcccaggcg atgccgtccg gaacgaaccg cttcatgaac atcgcagcgg taatcgcccc
     1081 cgccatcggt gagccgcaag cattggcgac gtcggcgata tcgctcttca gcatatcgcc
     1141 ataagcctcc cacagcggca tccgccacac agggtcgtcg accgccttgg ccgaatcctc
     1201 gatcgctgcg gccagatcct cgtcgttgac gaaaagcgcg ggaaggtcgg ggccaagcgc
     1261 cactcgggcg gcgccggtga gggtcgcaaa atcgatgata agctcgggct ccaattccgc
     1321 cgcgcgtgcg agggcgtcgg cgaggaccag ccggccctcg gcatcggtat tgtcgatctc
     1381 gacagtaagt cccttgcgcg acttgacgat gtcgcccggg cgtatcgaag cgccggaaac
     1441 cgcattctcg accgccggga tcagcaggtg aagccggacc gggagccgcg cggaagcgac
     1501 cagccaggcc agcgccagcg cgtgcgcgcc tccgcccatg tccttcttca tcaggcgcat
     1561 tccggtcgcg cccttgatgt cgagcccgcc cgaatcgaag cacacgcctt tgcctacgac
     1621 tgcgaccctc ggatgcttgg gatcgcccca ttcggcctcg atcagccgcg gcgcccgatc
     1681 cgccgtcgcg gccccgccga cggcggcaat cagcgggtaa ttctggcgaa gctcgtcgcc
     1741 gccggtgact cggatctcgg cattggcagt ggcgaggcga tcgcgggcag cttcctccag
     1801 ctcggcgggc ccaagccgaa tcgccggcgt attgacgagt tcgcggacga gcgcggttgc
     1861 gtcggcaagc ctaaccgccg cgtcgatcgc cgccgcttcg ccggtgacga ggactcgtgg
     1921 gcccttctcg ggctcatccg acttgctctt gaacgcatcg aacctgtgct gggcgagcag
     1981 ccagcccagc gcggctttgc ctggagcgcc ggcggccagg cggtagctgc cctccgggag
     2041 cacgtcgggg agcttggcca tgcaccacgg cgaaagcgaa ttgacggtcg cgacggcgct
     2101 gacgacctcg aagtcgtttc ctccgcgggg cagaatcacg cttgcgtatc cggtcttccc
     2161 gtcgaaccgg tgggcctcga gcaaagcccg gtcctccgcc gggcgggtct tcgcccactc
     2221 ggggaagctg tccttgtcga ccaggtggat cgcgtgtgcc ttttgcccac ggtcggcggt
     2281 gaggagggga gcgaaatcgg tcattgcggc ggggccctag cgcgatgcgg ggcttcaaag
     2341 cgagtccgcc gtgcggaggt ggacgaaaca gcagtggccc gcctaggagt tggcgtcacg
     2401 cgtacgatcg aaaggaactc cagacgtgaa gctctcgctg ccgttcgcct ccctcctgct
     2461 cgcaacgacc gccgcgtgca ccgccgttgc gccgccgccg accgcggccg tcccggtggc
     2521 agtcgatgcg caggcgccgg cgccggtctc ccctgcggcg gaagaccagc gactgatggc
     2581 attcctcgac gcagcgttcg aggaacaggc agcgcgaagc ccgcaattcc tgacggcgct
     2641 cgggcgcaaa gaccagtacg accggctcag caattacacg gacgaatacc ggcagcaggg
     2701 gctcgagctc gaaaaacgac agctggcgca gcttcgggcg caattcgacc tgcaaaatct
     2761 cactcccgcc ggccggttga gctaccggct gttcgaaaaa gaagtcgagg acgatatcgc
     2821 cggcttccgg tggcgctggc acggctttcc ggcaagcacg aacggcagcc ccgccggctc
     2881 gatcccggtc ttcctgatca accagcatcg gatcgattcg gtcgccgacg ccgaggccta
     2941 cgtcgctcgc ctgcgcgacg tcgagcgagt gatgaacgag atcacaggca acatgcggcg
     3001 gcaggcggcg atggggatcg tcccctcgcg cttcaatttc gagccggtgc gagccgatgc
     3061 ccgcagagtt ctcgctggag cgccaatcgc gcaagggaag gacacgcccg tcttcgccga
     3121 cttcaagagc aaggtgggca agctcgacat tccgcaagcc gagaaagacc ggctggtcgc
     3181 ccaggcccaa ggcgcgctta ccgggccctt ccatcgcggt taccaaacat tccttgagac
     3241 ctggaatgaa ctggagaagc agtcgcaggg caaccgcggc gcctggagcc tgcccgacgg
     3301 tggtgcctat tacgagaacc ggctcgagca atcgacgacg acccagctga cagcggacca
     3361 gatccaccac atcggccttc aacaggttgc gcgaatccac gccgagatgg agcggatcaa
     3421 gaaccaggtc ggctttaagg gaacgcttca gcagttcttc aagcacatcg tcgccagccc
     3481 ggagttcaaa tatccgaaca ccgattccgg gcgggagcaa tatctcgccg atgcgcgccg
     3541 ctacatcgac caggttatgg cggcggcggc gcaatggttc gcccgtcttc cgaaagcgcc
     3601 gctcgaagtg cgggccgtcg agcaatggcg gcaggaaacg gcggcggtcg ctttctacaa
     3661 cagtccgtcg gaggacggct cgcggccggg aatctactac gtcaacctcg ccgacatgaa
     3721 ccaggtactc aagccgcaga tcgaggcgat cagctatcac gaaggcgcgc cggggcatca
     3781 tttccagatc gcgctcgccc aggagctgcc gaacgtcccc aagttccgcc gcttcggcgg
     3841 gtacggcgcc tattccgagg gatggggact ctacgccgag gggctgggca aggagatggg
     3901 cttctaccaa gaccccattt ccgaattcgg catgtactcg acccagttgt ggcgcgcggt
     3961 ccggttggtc gtcgataccg ggatccactc gaagcgctgg agccgcgagc aggcaatcca
     4021 atatttcctg gctaatgcgc tgctgtcgga gcgcgatgcg accaaggagg tcgagcgcta
     4081 cttcaactgg cccggccagg cgacgagcta catggtcggg cagctcaaga tactcgaact
     4141 gcgcgacaag gcgcgggcgg cgcttggcga gaagttcgac attcgcgagt tccacggggc
     4201 cgtgcttgag aacggcgccg ttcccctcga cgtcctcgag gagctcgtag attcgtacat
     4261 cgcgagcaag aagaccacct agcggctgct aatttgtcgc ttcaatcctc gcccagcggt
     4321 ggcgagtggg gtgcaatcag tcactcaccg gggctgacca ggaattgctc gatccggccg
     4381 ttcgcgcccg gttcgtagaa ggtcgacagg tcgagggtgc ggcccgcata ttcgatcgtg
     4441 taatgctgga tgacgaaccc gccgcgaagc acgggattgc ccgaaggctc gaacgcggtg
     4501 ggctcgccca gcggagcgag gctcgaccgg aagtcggcga tcgcctgctc ggtgaaataa
     4561 taattggcgt tgtcggtgag aagcgagcgg tcgagccgcc cgccccgaag ctgatcgtaa
     4621 acctggcgcg ccttcgccgc tgctgccgcc gcctcggcat cctgcggcgc cggcggcagg
     4681 acgatcttgg cgatgtcgcg ggaaatccgg ccgtaggcgc cgccagacca gctgttcgtg
     4741 aacaccgcaa tcgcggcctt ctggtcaaga tagacggcgt tggtggacag gaagccgacc
     4801 gactcgccgc catggctcac caccttgcgg ccgttcacgt cgcgaacgta gacgccgagc
     4861 ccgtaacgcg tgtcggtgcc gtcgttgagc ttcacggtgg tttcctgctc ggcccagtcg
     4921 tcgggcggaa gcagggcccg gttcatcctg gcgatgtccc atttcgccag gtcttcggcc
     4981 gtcatcgaca gttcgccggc ggcatacagc cagccgggcg ccgcgggggt caccggtcgg
     5041 accgggccga gcgcgtagcg gccgtagccc gacgggtaac gcggcccgac cgcgtcgtcc
     5101 tggctgacca cgctggtcat cccgagcggg tcgaagattc gccgcttgag gaagcgcatc
     5161 aacggctcgc cgctgacctt ctccgcgatc attccggcga tgacgtatcc ggtgttcgaa
     5221 tattgccatt gctcgcccgg ctgaaagtcg agcggcttct ttgcccaacg gtcgacgatt
     5281 gcctgcgggg tcacaggctt cgccatcgcc gcaaagctgt agtcctgcgg ccaatagtcc
     5341 tgcaggccgg acgtatgcga cagcaggtgg cggagggtga tcttgtcggc gccgctgacg
     5401 tccgggaaat atttcgccac tggatcgtcg agatcgagct tgccgtcgtc ctcgagcagg
     5461 agcagcgcca tcgcggtgaa ctgcttggaa ttggatgcga tctgataggg gaggccgggt
     5521 gtcgccggga gcccgtcatt ggctttccca taggccttgt tgaggacgat ctcgccgccg
     5581 cggacgaccg cgacctcggc ggaagggacc gcggtctcgg ccagccgctt ggcgacgacc
     5641 tggtcgatcc gggcgatttc ggccggggtg agcggctgcg cggcgagcgg cgcggcgacc
     5701 gcggccagca atgcgaggaa gaatttcagc atcggcgcaa actagccagc acttggccgg
     5761 agtcgagtcc cgctcggccc gcgctagctg gtcgctggct tgctgagctt ttccagcagc
     5821 ttctcgaaat ccccgggatt ccggcaattg agcgggtacg ccccgcggca tagcgtggtg
     5881 ccgatcaagc ttggacgagc cgcggcgctt cgagcaaaat tcgtgtagat catcgaggcc
     5941 cctcagaaac gcgtacattt ggagtgagtt gcgagcaacc tgaagagatg cgggaaacgg
     6001 acttcggcgc acgccgaccc gctgcaagca caggctaaag ggggcttcgt ccccgcagaa
     6061 aagtcgccaa cggattattc gtttcaggat tgcgcggggt cctattgacc tttaattaga
     6121 atatcctaat ttagcagttg tgaaagcttt gaacgacctc gccgcaaagg ccgccgacgc
     6181 ggctgcgttg ctcaaatcgc tggccaacga acagcggctg ctcatcctgt gccacctcgc
     6241 aacgcaggga gagttgtccg tgagcgagct gggcgagcgg ctggagctca gccaatcggc
     6301 gctttctcaa catctcgctc ggcttcgaca ggaaaggctc gtcacgttcc gccgccagtc
     6361 gaagaccatc cattacaagg tctccgatcc catggccgag gacgtgcttg cgctcctgag
     6421 cgatttgttc tgccccgagc ttgcacagcc ggttacggag tcttccgcat cgcgcagcat
     6481 tccgggccgc ggtagggctc gcggaggagg aaaaggatga ccgagtcaga tcccgttctc
     6541 gatattgctt tcgaccaggt caggcgcacc ggaagcggcg attcgtccag gccggaggtc
     6601 acgagcttct ttcacgagcc taccttcacg gcgtcctatg tcgtcgcgga tcctgcaacc
     6661 ggccacgcgg caatcgtgga cagcgtgctc gatttcgacg aaaaatcggg ccgtacatct
     6721 acgacggcag ccgatgcgat catcgacttg gttaccgatc gcggcctgac cgtcggctgg
     6781 ctgctggaaa cccacgccca cgccgatcac ctgtcggctg cgccctacct ccaggaaaaa
     6841 ctcggcggaa agattgccat cgggcgagac atcacggcgg tccagaacgt attcggggac
     6901 gtctacaacg aggatagccg cttccgccgc gacgggtcgc agttcgatca cctgttcggc
     6961 gatggcgact ccttttcgat cggcaacgtc gcggcgatcg cgctccacgt ccccggccat
     7021 acccccgccg acatggccta tgtcatcggc gacgtggcct tcgtcggcga cacgatgttc
     7081 atgcccgatt acgggaccgc gcgagccgat ttcccaggcg gtgatgcccg acagctctac
     7141 cggtcgatcc ggaggctgat gaggcttccg gacgaaaccc gcgtattcct gtgtcacgac
     7201 tataaggccc tgcccaatcg gacccatttc gcttgggaga ccacgatcgg agccgagcgg
     7261 actggcaacg tgcatgtcca cgaaggtgtc agcgaggacg agtttgtcgc catgcgcacc
     7321 gcgcgcgacg ccaccctcga catgcccaat ctcatccttc cggcggtcca ggtgaacatg
     7381 cgcgccggcc atttgcccga gccggaggac aacggcacgc gctatctcaa attgccgctg
     7441 aacgccctgt gatgctcgag ccgctgtctc ccctttatgc tctcgccggc ggcctcctga
     7501 ttggcaccgc caccgcgctt ttcctccttc tttcgggccg gatcgcgggt gtcagcgggc
     7561 tcgccgccgc cgctgcgcgc atcgccgacc ggggaccgga atggtcgcag gcggcaagtt
     7621 tcgtcatcgc cctgccaatc ggcgccctga tagtatccgc gtttcttcga gcgccgcagg
     7681 tctcaatgac ttcctcgctg ccgctcctga ttgcaggggg catgttggtc ggtttcggaa
     7741 cgcggctcgg caatggctgc acaagcggcc acggcgtatg cggaatggcc cgcctgtcgc
     7801 cgcgatcgat tgccgcgacc gccatgttca tggccttcgg tttcgccacg gtatatgtga
     7861 tccggcacgt ggtcggagcg gccgcatgag gcatatcctc cccggaatcg tggtcggtct
     7921 cctgttcggc gcgggcctcg ccttgtcgga catggtcaat ccggcgcgcg tgctcgcctt
     7981 tctcgatatc gccggcaatt gggatccgac gctcgcctat gtgatggcgg gtgcggtcgt
     8041 tccgtccgcg ttcggctatt ggttgtcgcg gcgaatgcgt cgcccgctgc tgggacacga
     8101 gttcaggatc ccgccgaacc gcgtcgtcga tccgcagctc ctcgccggag cggccgtttt
     8161 cggaatcggt tggggcttgg tcggattgtg cccgggaccc gcttttgcgg ccctcgcatt
     8221 caacctgtgg cagccttggc tgttcgtgat cgcgatggtc ggagggatgg tcctgcaccg
     8281 ggtttatcgg gactggatag cgcagccccg gcagccggcc gacgcgtgac gctcacgctc
     8341 gttcaatatc tgctcggcat cggttcgggc gcgcttgtcg ggttcgtcct cggcctggtc
     8401 ggtggcggcg ggtcgatcct ggcggtgccg ctgatcgtct atcttgttgg cgttcgcgat
     8461 gcccatgtcg ccatcggcac cagcgccttt gccgtcgccg ccaacgccgc caccggcctc
     8521 gtccaccacg cccgctcggg ccacgtcaaa tggcgatgcg ccggcctgtt tgcggtcgcc
     8581 gggatcgccg gggcggcaat gggctcgacg ctgggcaaga attttgacgg tcagaggctc
     8641 ctcttcctgt tcgcgctggt gatgatcgcg gtgggtgtcc tgatgctacg ccgccgtgcc
     8701 tcgttcggga atccggacgt gaagctcggc cgcgagaatg ccgggaagct cgtcggctac
     8761 ggcctcggcg ccggtgcctt ctccggcttt ttcgggatcg gcggcggttt cctgatcgtc
     8821 cccggcctga ccgcggcgac cggcatgtcg atgatcagcg ccgtcggctc ctcgctcgtc
     8881 gccgtgaccg ccttcggcct cacgacagcg ctcaactatg cgctctcggg tctcgtcgac
     8941 tggccgcttg cgcttgcatt catcgccggc ggccttgcag gcagcatctt cggcacccgc
     9001 ctcgcgaaac atctgacgaa gagccgcgac cgcctcagcg ccgtattcgc ggctctgatc
     9061 ttcgcggttg ccgcctacat gctctggaaa agctacgccg ccgcctgggg ctgaactttt
     9121 attcggctgc agccctgccc atcggtgcgc gccgcgacgc ccggccgatc gcatgatagt
     9181 cgaagccggc ccgcgcggcc tcctc
//
LOCUS       DATAKH010000106         8354 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_4638,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000106 DATAKH010000000
VERSION     DATAKH010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8354
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4638"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..907
                     /locus_tag="VHN55_04420"
     CDS             <1..907
                     /locus_tag="VHN55_04420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008071756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX2803210.1"
                     /translation="LRDFYAMDHAMVFSTGYLANLGIISTLAGKDDYIVLDVDSHASI
                     YDGCALGNAQIVAFRHNNVDALEKRLKRIPEGAGKLVILEGVYSMLGDVAPLKEMVAI
                     SKANGAMVLVDEAHSMGFIGENGRGVAEAQGVIDDVDFIIGTFSKSVGTVGGFCVSNH
                     PKFEILRLVCRPYVFTASLPPSVVATAETSIRKLMHGADKRAHLWENSKRLHAGLKQL
                     GFTLGTDEPQSAIIAVIMPDLETGAAMWEALLKEGLYVNLARPPATPAGKTLLRCSLC
                     AEHSAAQVDEILAMFGSAGRATGCI"
     gene            957..2957
                     /locus_tag="VHN55_04425"
     CDS             957..2957
                     /locus_tag="VHN55_04425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2803211.1"
                     /translation="MTPSADSQEAVRFDWRRGWAAAGAFVAVLLLLGLVFLVALSNSE
                     RDRAVERERHAYEVTLLTRSIDANLSRSEAALGRFALDEDVKTSGNIYLSYWRLAGRQ
                     IDQLQRLGGTTPEQLGRLNELRSLYDQLGAKFDNVARVITARKGDYGISYYYATVGPQ
                     AKPPLEPMLHAKLREIADAERTVLEQRMKQTKFFAARADRFTDYLSWLGVLVGIGAIV
                     LGVIAVQAIRQFSYARRRAENEAERAEALDAAVRERTQELWQANEALKAEAAEREAAE
                     AQLRQVQKMEAVGQLTGGIAHDFNNMLAVVVGGVDLARRRLNGPRREVLAHLNNAMEG
                     ATRAAALTRRLLSFARSEPLLPERADPKGLVSGMSDLLDRTLGERIRVKIDLDGDTWP
                     VYVDPHQLENAIVNLAVNARDAMDGAGRLKISTRNVKVSANEVGDIRAGDYVRISVTD
                     TGCGMPPEVKERAFEPFFTTKPVGKGTGLGLSQIFGFAHQSGGEVGIESEVGKGTTVS
                     IYLPRTSAQAPIQLRPAANRMSEDERVPGARILVVEDDPRVRTSTVEALQDLDYDPIA
                     CESGEEAIRLFEKHDFDLVISDVIMPEITGPELIKILKDKRDDFAVLFVTGYVGESET
                     DSLVGHELLRKPFTVGALASSVATALAQASERPPTSGAAAAT"
     gene            complement(2914..3786)
                     /locus_tag="VHN55_04430"
     CDS             complement(2914..3786)
                     /locus_tag="VHN55_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803212.1"
                     /translation="MPELKVLVADELGAPVDTRVTAMAEAIAAKHGEASQAVLFYGSC
                     LRQEQLEGLMLDFYLIVSDYRKAYRKRWLAAANRLIPPNVFYFEQDGLAAKYAVLSEA
                     DFERDCGPDARSTSIVARFAQPARLAWSADEDTTRRVVEAVSRCAPTLLGWAVPLAPH
                     DSSALDLWKRAFQLTFGAELRAERSDRSSQIVDSDPDRYLRFAKAAGAAVDRLDGNAA
                     HWWRRMQRKGKRLSVLRLAKATATFAGGADYIAWKVNRHAGTTIELKPWQRRWPLVAG
                     LTLLPRLLKSGAVR"
     gene            complement(3797..4846)
                     /locus_tag="VHN55_04435"
     CDS             complement(3797..4846)
                     /locus_tag="VHN55_04435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylglycerol kinase family protein"
                     /protein_id="HEX2803213.1"
                     /translation="MLKTQAAVNGDAATPAPCDAPACRRTSCRPRVALLSNPRSTGNV
                     AQLSRFRSYCADHPDIFHYEVEHVDQISDALKSIARVRPKMLVINGGDGTVQAALTEI
                     HNGNHFGDSPPAMAVLPSGKTNLIALDLGVHGDPIAALQRLVELAQGDLGDHLVAREL
                     IALRSGASERPVIGMFLGGAGLADTMLYCRDKIYPLGLPNAISHGLTALALLFRIVFG
                     VRASFLPPKASPLNVSTSRAGTMSGRFTLLAVTTLEKLLFSGEFRSSGAGPLKLLTIE
                     ERPASIVRAMFAGIFGKLGRQSVRGIHVEEADEISIEGECSNVILDGEMFRAEAGKPI
                     RLNSAQPLSFVRLAA"
     gene            4963..6162
                     /locus_tag="VHN55_04440"
     CDS             4963..6162
                     /locus_tag="VHN55_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX2803214.1"
                     /translation="MRQLSLIDRYLARSIAVPLLGTLVLAAMLLVLDKLLRLFDFVVN
                     TGGPVSVVWRMLANLLPEYFSLGIPIGLLLGILLAFRKLALSSELDALRGIGIGFGRL
                     LRVPYMYAGVLMLLNVLIVGYIEPFANYRYEGLRFDLRSGALGASIKVGEFNRLGRKL
                     TIRIDRSEEHGTRLHGIFVQVEDSSGGNVAATAAGGRFLSTDDPRVILFRLQDGRLVQ
                     QSPKFPAPRTLTFKSYDLPITVPAIDQFRQRGTDFDELFFNELFRLGYRGAAESREQQ
                     LGAQANFNYRIVEILMMAMLPMLAVALAVPPKRSSSALGIFVGIVLVVAYHKVNQYGQ
                     YAGAQGRIDPMIAMWVPFVLLASLIGWMYYVISHKPGGQPIGALEWAAAKAARSIRSL
                     MPRSRPA"
     gene            6162..7256
                     /gene="lptG"
                     /locus_tag="VHN55_04445"
     CDS             6162..7256
                     /gene="lptG"
                     /locus_tag="VHN55_04445"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017181530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEX2803215.1"
                     /translation="MHLEFFPSRQLALYAVRLYLTRSLAVLIGLVLVLMALDLLGESG
                     KILAVPGNGDAQLWHYVGLRVPLLVSRFLPFSILLGTLIMFVALNQNSEVVAMKAAGI
                     SAHQMLAPLILASLAIAVVAFAFNETVVVRSARAVTAWTENDYKPVPPESGIISNIWV
                     SRGGDLVHARHVGGQGDDFHAERVTVYEVEQGSLKRIVNAERAVPAGSKWRLEDVRIY
                     DTTQNLVRKVPQLTGLDGMTREQLTLSRVDPDETGFFALRRKIGEMEAAGKPTAAARA
                     GLWHKISGPLSIVLMPLLAAVAAFGLARSGQVLLRATIGMALGFTYFVADNFSLAMGN
                     VGAYPPILAAWAPFFLFLLVGETVLIRSEE"
     gene            7327..7524
                     /locus_tag="VHN55_04450"
     CDS             7327..7524
                     /locus_tag="VHN55_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803216.1"
                     /translation="MFIAAAFTASPAQLPKAAGAAIVRIEQPVAVSARNWEHSLQVTR
                     REVIVRDEQGRKLLLRLIEMQ"
     gene            complement(7529..>8354)
                     /locus_tag="VHN55_04455"
     CDS             complement(7529..>8354)
                     /locus_tag="VHN55_04455"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010215727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEX2803217.1"
                     /translation="AIFAVLALYRADSFIQELTHIEPNAVPGFRLVWNLIVGVPLFVP
                     SFMYEGVHNQHHAKRYYGTANDPEYLPLALMKPWTLPVFVIAALLAPVGMLIRFAILA
                     PLSLIWPKLRRVVVEKYSGLQINPRFRRPVPEGAFARDWRLLEIACSLWALTLIGLTV
                     TGVIPLRAFLIFLGIASGVMFLNQVRTLVAHLWENEGEPMSVTAQYLDSVNVPPPATL
                     PVLWAPVGLRYHALGTAHRRLCAALEQDSIYHEASHRGLSRLVVRLATSSWRGRSR"
BASE COUNT         1486 a         2721 c         2671 g         1476 t
ORIGIN      
        1 gcttcgcgac ttctacgcga tggaccatgc gatggtcttc tcgaccggat atctcgccaa
       61 cctggggatc atttccacgc tcgccggcaa ggacgattac atcgtcctcg acgtcgacag
      121 ccatgcctcg atctatgacg gatgcgctct cggcaacgcc cagatcgtcg cgttccgcca
      181 caataacgtc gacgcgctcg agaagaggct gaagcggatc ccggaaggcg ccggcaagct
      241 ggtgattctc gagggcgtct attcgatgct cggcgacgtc gccccgctca aggagatggt
      301 cgcaatctcg aaggccaacg gagccatggt actcgtcgac gaagcccatt cgatgggttt
      361 catcggcgag aacggccgcg gagtggccga agcgcagggc gtcatcgacg acgtcgactt
      421 cattatcggc accttctcca agtcggtcgg caccgtcggc ggcttttgcg tgtcgaatca
      481 tcccaagttc gagatcctgc gactggtttg ccgcccctat gtgttcaccg cctcgcttcc
      541 gccctcggta gtcgccacag ccgaaacgtc gatccgcaag ctgatgcacg gcgccgacaa
      601 gcgcgctcac ttgtgggaaa attccaagcg cctccatgcc gggctcaagc agctcggctt
      661 caccctcggc acggacgagc cacagtcggc aatcatcgca gtcatcatgc cggacctgga
      721 gaccggcgcg gcgatgtggg aggcgctcct caaggagggg ctgtatgtga atctcgcgcg
      781 gccgccggcg actccggccg gcaagacgct gcttcgctgc tccctctgcg ccgagcattc
      841 cgctgcccag gtcgacgaaa ttcttgcgat gttcggttcc gcagggcggg cgaccggctg
      901 catttgaagg ggacagctgg ctttcgtcta ccggaagacc tgtctacact gacgccatga
      961 cgccgagcgc agacagccag gaagcggtcc gcttcgactg gaggcgcggc tgggcagccg
     1021 cgggcgcgtt cgttgcggtc ctcctgctgc tcgggctggt ttttctcgtg gcactgtcca
     1081 atagcgagcg cgaccgggcc gtggaacgcg agcgccacgc ctacgaggtc actctcctga
     1141 cccgctccat agacgccaac ctgtcgcgct ccgaagcagc cctgggccgc ttcgcgcttg
     1201 acgaagacgt caagaccagc ggcaacatct acctgagcta ctggcgtctc gcgggacgcc
     1261 agatcgacca gcttcagcgc ctcggcggca ccactcccga gcagctgggg cgattgaacg
     1321 agcttcgcag cttgtacgac cagctcgggg ccaagttcga caatgtcgcc cgcgtgatca
     1381 ccgcccggaa gggggattac gggatcagct attattacgc gaccgtgggc ccgcaggcga
     1441 agccgccgct ggagcccatg ctccatgcca agcttcgtga gattgccgac gccgaacgta
     1501 cggtcctcga gcagcgcatg aagcagacca agttcttcgc cgcgcgggcg gatcgcttca
     1561 ccgattacct cagctggctc ggggtgctcg tcgggatcgg cgcgatcgtc cttggcgtga
     1621 tcgcggtgca ggcgatccgg caattctcct atgctcggcg cagggccgag aatgaggcgg
     1681 aacgcgccga ggcgctcgat gccgcggttc gggagcggac ccaggagcta tggcaggcga
     1741 acgaggcgct caaggccgaa gccgccgaac gcgaggcagc cgaggcccag ctccggcagg
     1801 tccagaagat ggaggcggtg ggccagctca ccggcgggat cgcccacgac ttcaacaaca
     1861 tgctggcagt ggtagtcggc ggcgtcgacc tcgcccgcag gcggctgaac ggtccgcgcc
     1921 gggaagtgct cgcccatctc aataatgcga tggaaggagc gacccgcgcc gcggcgctga
     1981 cacggcgcct gctgtccttc gcccggtccg agccgctact gcccgagcgg gccgatccca
     2041 agggccttgt ttcgggaatg tccgacctat tggacaggac gctgggcgaa cggatccggg
     2101 tgaagatcga cctcgatggc gatacctggc cggtctacgt cgatccgcac cagctcgaaa
     2161 atgcaatcgt caacctggcg gtcaacgccc gcgatgcgat ggacggcgcc ggccggctga
     2221 aaatcagcac gcgaaacgtt aaggtttcgg caaacgaagt cggcgacatt cgagccggcg
     2281 actatgtccg aatttccgtc acagacaccg gttgcggaat gccgcccgag gtcaaggaac
     2341 gcgcctttga acccttcttc acgaccaagc cggtcggcaa gggcacgggt ctcggcctca
     2401 gccagatctt cggtttcgcg caccagtcgg ggggcgaggt cgggatcgaa agcgaggtcg
     2461 gcaagggtac gaccgtttcc atctatctgc cgcgaacctc cgcccaggct ccgatccagc
     2521 ttcgcccggc ggccaaccgg atgagcgagg acgaacgcgt cccgggtgct cggatcctcg
     2581 tcgtcgagga cgacccgcgc gttcgaacct cgacggtcga ggcgctccag gacctcgatt
     2641 acgacccgat cgcctgcgag agcggggagg aagcgatccg actgttcgaa aagcacgatt
     2701 tcgacctcgt catcagcgac gtcatcatgc cggagatcac ggggccggaa ctgatcaaga
     2761 tcctgaagga caagcgcgac gatttcgccg tcctcttcgt caccggctat gtcggcgaaa
     2821 gcgagaccga cagcctcgtc gggcatgagc tgctgcgcaa gccgttcacc gtcggagcgt
     2881 tggcctcttc ggtcgcgacg gcactcgcgc aggctagcga acggcccccg acttcaggag
     2941 ccgcggcagc aacgtaagcc ccgcgaccag cggccagcgc cgctgccacg gcttgagctc
     3001 gatcgtcgtc ccggcgtggc ggttcacttt ccaggcgata tagtccgctc cccccgcaaa
     3061 ggtcgccgtg gctttggcaa ggcgaagcac cgacaaccgc tttcctttcc gctgcattcg
     3121 ccgccaccag tgcgccgcat tgccgtccag ccggtccacg gccgctccgg ccgccttcgc
     3181 gaaccgcaag taccggtccg ggtcggaatc gacgatttgg gacgagcgat cgctccgttc
     3241 ggcccgcaat tccgcgccga aggtcaactg gaacgcgcgc ttccaaaggt cgagtgcgga
     3301 agagtcgtgg ggtgcgagcg gaactgccca gcctaggagc gtcggagcac accggctcac
     3361 tgcttcgacg acccgccggg tagtgtcttc gtccgcgctc cacgccagcc gcgccggctg
     3421 cgcgaagcgg gcgacgatgg atgtgctccg cgcatccggt ccgcaatcgc gctcgaaatc
     3481 ggcctcgcta agcaccgcat atttcgccgc cagtccgtct tgctcgaaat aaaagacatt
     3541 gggcgggatc agccggttgg cggccgccag ccacctcttg cgataggctt tccggtaatc
     3601 cgacacgatc aggtagaaat cgagcatcag gccctcgagc tgctcctgcc tgaggcacga
     3661 accgtagaag agcaccgcct gcgaggcctc gccgtgcttg gccgcaatcg cctcggccat
     3721 cgcggtgacg cgggtgtcga cgggcgcgcc gagttcgtcg gctaccagga ccttcagctc
     3781 aggcatcggc gaaagcttac gccgcgaggc ggacaaacga cagcggctgg gccgaattca
     3841 ggcggatcgg ctttccggcc tcggcacgga acatctcgcc atcgaggatc acgttcgaac
     3901 attcgccctc gatgctgatc tcgtcggcct cctcgacatg gattccgcga accgactggc
     3961 ggccgagctt cccgaagatc ccggcgaaca tggcgcgaac aatcgacgcc ggccgctctt
     4021 cgatggtcag cagcttgagc ggaccggcgc ccgagctccg gaattctccg gaaaacagga
     4081 gtttttcgag cgttgtcacc gccagcagcg tgaatcgtcc gctcatcgtt ccggcgcggc
     4141 tcgtcgatac gttgagcgga gatgccttgg gcggcaagaa gctcgccctc accccgaaca
     4201 ctattcgaaa cagcagggcg agcgcggtca gcccgtggct gatcgcattg ggcaggccca
     4261 acgggtaaat cttgtcgcgg caatacagca tcgtgtcggc aagcccggcg ccgccgagga
     4321 acatgccgat gaccggccgt tccgaagcgc cgctccgaag cgcgatcagt tcgcgggcga
     4381 cgagatggtc gccgaggtcg ccctgcgcca gttccaccag ccgctgaagc gcagcgatcg
     4441 ggtcgccgtg gactccgaga tcgagcgcaa taaggttggt cttgccgctc ggaagcacgg
     4501 ccatggccgg gggcgaatcg ccgaaatggt tgccgttgtg gatttcggtc agcgccgcct
     4561 ggacggttcc gtcgccgccg ttgattacga gcatcttggg acggacccgg gcgatggact
     4621 tcagagcgtc gctgatctga tcgacatgct cgacctcgta gtggaagatg tccgggtgat
     4681 ccgcgcaata ggaccgaaag cgcgacagct gggcgacatt gccggtcgac cgggggttgg
     4741 agagcagcgc aacccgcggc ctgcaactgg tccggcggca cgcgggcgcg tcgcagggcg
     4801 cgggcgtcgc cgcgtcgcca ttcaccgctg cctgcgtttt caacatgcta aatttcaacc
     4861 gcgccgctaa gagtccatca cgggcaaagt ggcgagcgcc actgccccgt ttggctctgt
     4921 ccgtccgctt tgcggccaaa tgatggtgta ggaacgacca agttgcgcca gttgtcgctc
     4981 atcgatcgct acctggcgcg gtccatcgcg gtgccgctgc tcgggacgct cgtgctcgcg
     5041 gcgatgctgc tcgtgctgga caagctgctc cgcctgttcg attttgtcgt caacactggc
     5101 gggccggtca gcgtcgtctg gcgaatgctc gccaatctcc tgcccgaata tttctccctc
     5161 ggaatcccga tcggcctgct gctcggaatc ctgctggctt tccgcaagct ggcgctgtcg
     5221 tcggagctgg acgcgctccg cggcatcggg atcggcttcg gacggctgct ccgggtgccg
     5281 tacatgtacg ccggcgtcct gatgctgctc aatgtgctga tcgtcggcta catcgagccc
     5341 ttcgccaact accgatacga agggcttcgc ttcgatctga ggtcaggagc gctgggcgcc
     5401 tcgatcaagg tcggcgagtt caatcgcctg ggcaggaagc tcaccatccg gatcgatcga
     5461 agcgaagagc acggcactcg tcttcacggc atcttcgtcc aggtcgagga ttcgtcaggc
     5521 ggaaatgtcg ccgcgacggc cgcgggcggc cgcttccttt cgacggacga tccgcgggtt
     5581 atcctgttcc ggctccagga tgggcggctg gtgcagcaat ctccgaagtt tccggcgccc
     5641 cggacactga cgttcaagag ctacgacctg ccgatcaccg tcccggcgat tgaccagttc
     5701 cgccagcgcg gcaccgattt cgacgagctc ttcttcaacg aactgttccg gctcggctac
     5761 cgcggcgctg cggaaagtcg cgagcaacag ctcggtgccc aggccaactt caactaccgg
     5821 atcgtcgaga tcctgatgat ggcgatgctt ccgatgctcg ccgtggccct cgccgttccg
     5881 cccaagcgaa gctcgtcggc gctggggatt ttcgtcggga ttgtcctggt cgtcgcctat
     5941 cacaaggtga accagtacgg ccaatatgca ggcgcgcagg gacggatcga cccgatgatc
     6001 gcgatgtggg ttcccttcgt gctcctcgcg tcgctgatcg gctggatgta ctacgtcatc
     6061 tcgcacaagc cgggtggcca gccgatcgga gcgctcgaat gggcagctgc gaaggccgcc
     6121 cgaagcattc gttcgctaat gccgcggtcg aggccggcgt gattcacctc gaattcttcc
     6181 cgtcgcggca gctcgcgctc tatgcggtgc gcctgtacct gacgcgcagc cttgccgtgc
     6241 tcatcgggct cgtcctcgtc ctgatggcgc tcgacctgct cggcgaatcg ggcaagatcc
     6301 tcgccgtacc cggcaatggg gacgcccagc tgtggcacta tgtcggattg cgcgtgccgc
     6361 ttctggtgtc ccgcttcctc cccttctcga tcctgctcgg cacgctcatc atgttcgtgg
     6421 cgctcaacca gaacagcgaa gtggtcgcga tgaaggcggc gggcatttcc gcccaccaga
     6481 tgctggcccc gctcattctc gcgagcctcg caatcgcggt cgtcgccttc gctttcaacg
     6541 agactgtggt ggttcgctcg gcccgggctg tcacggcctg gaccgagaac gactacaagc
     6601 cggttccgcc ggaaagtggc atcatttcca atatctgggt gagccgcgga ggcgacctcg
     6661 tccatgctcg ccacgtcggc ggccagggcg atgacttcca cgccgagcgg gtcacggtct
     6721 acgaggtcga gcaagggtcg ctcaagcgca tcgtcaatgc cgagcgggcg gttccggccg
     6781 ggtcgaaatg gaggctcgag gacgtccgaa tttacgacac gacgcagaat ctcgtccgca
     6841 aggttccgca gctgaccggc ctcgacggaa tgactcgcga gcagctgacc ctgtcgcggg
     6901 tcgacccgga cgaaaccggc tttttcgcgc ttcgccggaa gatcggcgag atggaagcgg
     6961 caggaaaacc gaccgcggcc gcgcgcgccg gcctgtggca caagatttcc gggccgctgt
     7021 cgattgtcct gatgccgcta ctcgccgccg ttgcggcatt cggcctggcc cgctcagggc
     7081 aggtcctgct ccgggcgacg atcgggatgg cgctcggttt cacctatttc gtcgccgaca
     7141 atttcagcct ggcaatgggc aatgtcggcg cctatccgcc catcctcgcc gcatgggcgc
     7201 ccttcttcct gttcctactg gtgggcgaga cggtgctcat tcgttcagaa gagtgaaagc
     7261 ggctccactc cggaggattg cgtaaggacg gattagtcgc ctttgctgga aagctcggcg
     7321 atgttgttgt tcatcgccgc cgccttcacg gcatcgccag cccaattgcc gaaggccgcg
     7381 ggcgctgcga tcgtgcgcat cgaacagccg gtggcggtca gcgcccggaa ctgggagcac
     7441 agtctccaag ttacccgccg cgaggtgatc gtccgcgacg aacagggccg caagctgctt
     7501 cttcgactga ttgaaatgca gtgacggact agcgcgagcg cccgcgccag ctgctcgtcg
     7561 caagcctgac caccaggcgc gaaaggccgc ggtggctcgc ttcgtgatag atcgaatcct
     7621 gctccagggc tgcgcacagg cggcggtggg cggtgccaag cgcgtggtag cgaagcccga
     7681 ccggcgccca cagcaccggc agggtcgccg gcggcggcac gttgacgctg tcgagatact
     7741 gggcggtgac gctcatcggc tcgccctcgt tttcccacaa atgcgcgacc agcgtccgca
     7801 cctggttgag gaacatcacg cccgaagcga tgccaaggaa aataaggaag gcacgcagcg
     7861 gaattacccc cgtcacggtg agaccgatca gagtcagtgc ccacaggctg caggcaatct
     7921 cgagaagcct ccagtcgcgg gcgaatgcgc cttcaggcac cgggcgccgg aaccggggat
     7981 tgatctgaag ccctgaatat ttctcgacga cgactcgtcg aagctttggc caaatcagcg
     8041 acaggggtgc gagaatggca aagcggatca gcatcccgac gggggcgaga agcgcggcaa
     8101 tcacgaacac cggcagcgtc cacggcttca tcagcgccag cggcagatat tcggggtcgt
     8161 tcgcggtccc gtaatagcgc ttggcgtgat gctggttgtg gacgccttcg tacatgaagg
     8221 acggcacgaa cagcgggacg ccgacgatca ggttccagac cagccggaaa cccggaaccg
     8281 cattcggctc gatgtgcgtc aactcctgaa tgaagctgtc tgcgcggtag agcgccagga
     8341 ccgcaaagat cgcc
//
LOCUS       DATAKH010000107         4912 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2265,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000107 DATAKH010000000
VERSION     DATAKH010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4912
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2265"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..765
                     /locus_tag="VHN55_04460"
     CDS             67..765
                     /locus_tag="VHN55_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX2803218.1"
                     /translation="MSADEKFFAWLDGELAGAEAAEVEARVAADPELAALAEQHRALQ
                     ARLAGAFDAVAAAPVPERLRAAALPSKSNLVDLAERRSRRFPALPQWAAIAATLVLGI
                     FVGTLMSGDSNAPVEVRKGTIYAGRNLDRALNTELASAPSDGPVRIGLTFRDQAGDIC
                     RSFTASAATGLACRHDGRWQVRGLFPVGEGQSGDYRMAAGMNPGLAALLDATMAGEPM
                     DGAQEAEARKSGWR"
     gene            complement(801..2078)
                     /gene="nhaA"
                     /locus_tag="VHN55_04465"
     CDS             complement(801..2078)
                     /gene="nhaA"
                     /locus_tag="VHN55_04465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017181343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEX2803219.1"
                     /translation="MAPPRSNVQRTERLAGLVLIAAAALALLAANTGLNDLYHAFLET
                     KFGPAMPRFGVLSVHYWIADGLMAIFFLLVGLEVKREWYEGRLSTPAERRLPFIAAAA
                     GMAVPALLYLLVIGFDPALIRGWAIPSATDIAFAIGILALLGVRSNPTIKLLLVTIAI
                     VDDIGAVAIIALVYTDSLNGIAIAMALAILALMATLNLFGVRRLWPYLLAFPFLWYAV
                     LASGIHATIAGVLAALAVPLGKDEPYSPLKRLEHELHPWVMFAVMPLFGFASAGVHIT
                     GFAELLQPVALGIIAGLFVGKQAGVFGAIWLAHCSGVAPRPRYTRWPELYGASLLCGV
                     GFTMSLFIGALAFPNSPDAVAAAKLGTLAGSFLSAIAGWTVLRFTAPMTFAEEEREEA
                     REIFGEDQDEPLPSPTLAEEMAAGEPGMRTTKD"
     gene            complement(2184..2363)
                     /locus_tag="VHN55_04470"
     CDS             complement(2184..2363)
                     /locus_tag="VHN55_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3008 family protein"
                     /protein_id="HEX2803220.1"
                     /translation="MPAKSKAQQKAAGAALSAKRGDTPKSELKGASKSMMSMSEKELE
                     KMASTKRKGKPEHVD"
     gene            2465..4549
                     /gene="scpA"
                     /locus_tag="VHN55_04475"
     CDS             2465..4549
                     /gene="scpA"
                     /locus_tag="VHN55_04475"
                     /EC_number="5.4.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004494 - methylmalonyl-CoA mutase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HEX2803221.1"
                     /translation="MSDEISRETPEGIDLKVVYGPEDARGIDPGKPGEPPFTRGPYAT
                     MYAGRPWTIRQYAGFSTAEESNAFYRRNLKAGQKGLSVAFDLATHRGYDSDNPRVAGD
                     VGMAGVAIDTVEDMKLLFDGIPLDTMSVSMTMNGAVLPVMAFFIVAGEEQGVAHDKLT
                     GTIQNDILKEFAVRNTYIYPPEPSMRIVADIIAYTNREMPKFNSISISGYHMHEAGAT
                     AVQELAYTLADGMEYVRVAMKQGLAIDEFAGRLSFFFGIGMNLFMEVAKLRAARTLWH
                     RIMTELGAKNDKSKVLRTHCQTSGVSLTEQDAYNNIIRTTIEALAAVLGGTQSLHTNS
                     FDEAIALPTDFSARIARNTQLILAEESGVTAVADPLGGSWYVEKLTRELEEKAWALIE
                     EVEAHGGMTKAVAEGLPKHRIEEAAAERAAKVDTGETVIVGVNRYQPESEPEHDILEV
                     DNARVRAGQIARIEKVRASRDEAKARAALDALTEGAKGDANLLALSVEAARARATLGE
                     ISDALERAFGRYDTVPEPVRGIYGKARGDDRWKAAEQGTRSVADRLGRKPRILVAKMG
                     QDGHDRGANLVSSAFTDLGFEVIPGPLFQTPRETAQMAVEKDVDVVGASSLAAGHRTL
                     IPEMIDALKDLGRADIKVVAGGVIPPQDYAALRAAGVQAIFGPGTNLADAADEVLRLL
                     GHNRPPLDEAAE"
     gene            4546..4782
                     /locus_tag="VHN55_04480"
     CDS             4546..4782
                     /locus_tag="VHN55_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803222.1"
                     /translation="MKHRIGCIAFTILGFTWLGFFLFEWFATTMGDCGDDQACNFYRG
                     YVDGFVFWRGLAVALLLILAYLGFRFLYKDDDVQ"
     gene            4766..>4912
                     /locus_tag="VHN55_04485"
     CDS             4766..>4912
                     /locus_tag="VHN55_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_074979792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEX2803223.1"
                     /translation="MMMFSKILIANRGEIACRVIRTARRMGIKTVAVYSDADARAPHV
                     LMADE"
BASE COUNT          894 a         1580 c         1647 g          791 t
ORIGIN      
        1 gatcggcacc gtttccagcc ggctggtgcg gggtcggacg gcgctgcttg gactggtagg
       61 tgaatcttga gcgccgacga gaaattcttc gcctggctcg acggagagct ggcaggcgcc
      121 gaggccgccg aggtcgaggc gcgggtcgcg gccgaccccg agctcgccgc gcttgccgag
      181 caacaccgtg ctttgcaggc gcggctggcc ggcgcgttcg acgccgtcgc tgcagcgccg
      241 gtccccgagc ggcttcgggc ggcagcgttg ccgtcgaagt cgaacttggt cgatctcgct
      301 gagcggcggt cgcgccgctt cccggcactg ccgcagtggg cggcgatcgc ggctaccctt
      361 gtgctcggca tcttcgtcgg gaccctgatg tccggcgaca gcaatgcccc cgtcgaagtc
      421 cggaagggca cgatttacgc cggccgcaat ctcgatcggg cgctgaacac cgagctcgcg
      481 agcgcgcctt cggacggccc ggttcgaata ggcctcacct tccgcgatca ggcgggcgat
      541 atctgccgaa gcttcactgc cagcgctgca acgggcctcg cctgccgcca cgacggccgg
      601 tggcaagtcc gcgggctgtt cccggtcggg gagggccagt ctggcgacta ccgaatggcg
      661 gcgggaatga atccggggct ggccgcgctc cttgacgcga cgatggccgg cgagcccatg
      721 gacggagcgc aggaggcaga ggcgcggaag agcggctggc gttagccggt ccgggcattt
      781 ccgaccctcg ctcgccggta tcagtccttg gtcgtccgca ttcctggctc gccggccgcc
      841 atctcctcgg ccagcgtagg cgacggaagc ggctcgtcct ggtcttcgcc gaaaatctcg
      901 cgcgcctctt cgcgttcctc ttcggcgaag gtcatcggcg cagtgaagcg aagcacggtc
      961 cagccggcga tggccgacag gaacgagccc gcgagcgtgc cgagcttggc ggccgcgacc
     1021 gcgtccgggg aattcgggaa ggcgagcgcg ccgatgaaca ggctcatcgt gaagcccact
     1081 ccgcacagca gcgacgcgcc gtacagttcc ggccagcggg tatagcgcgg gcgtggagcg
     1141 actccgctgc aatgggcgag ccagatcgcg ccgaaaacgc cggcctgctt tccgacgaac
     1201 agcccggcga tgattcccag cgcgaccggc tgcaacagct cggcgaagcc ggtgatatgg
     1261 accccggcgc tggcgaagcc gaacagcggc atcaccgcga acatcaccca cgggtgcagc
     1321 tcgtgctcga gccgtttcag tggggaatag ggctcgtcct ttccgagcgg aaccgcgagc
     1381 gcggcgagaa cgccggcgat ggtggcgtga attccgctcg ccaggaccgc ataccaaagg
     1441 aaggggaagg caagcaggta cggccacagc cgccgcacgc cgaacaggtt cagcgtcgcc
     1501 atcagggcga ggatcgcaag cgccatggcg atcgcgattc cgttgaggct gtccgtatag
     1561 accagcgcga tgatcgccac cgcgccgata tcgtcgacga tcgcgatcgt gacgagcagg
     1621 agcttgatcg tcggattgga gcgcactcca agcaaggcga gaatcccgat cgcaaaggcg
     1681 atgtccgtcg ccgacgggat cgcccatccg cggatcagcg ctggatcgaa cccgattacg
     1741 agcaggtaga gcagcgccgg aaccgccatt cccgcggccg ccgcaatgaa cgggaggcgc
     1801 cgttccgccg gtgtcgaaag ccgcccctca taccactcgc gcttcacttc cagcccgacg
     1861 agtaggaaga aaatcgccat caggccgtcg gcaatccaat agtggaccga gagcacgccg
     1921 aaccgcggca tggccggacc gaacttggtc tccaggaatg cgtgataaag atcgttgagg
     1981 cccgtgttgg ccgcgagcag cgccagtgcc gcggcggcaa tgagcaccag tccggcaagt
     2041 ctctcggtgc gctgcacgtt ggaacggggt ggcgccatgc ctccccttta accgtcgaag
     2101 ccctcaagaa aagggccgca gcccgaaatg ggcggcggcc ccgtgtatgg caaaggtgac
     2161 gcggagagcc gcgcctgcgg ctgtcagtcg acgtgctccg gcttgccctt gcgcttggtc
     2221 gaagccattt tttccagctc tttctcactc atcgacatca tcgacttgga tgcgcccttg
     2281 agctcgcttt tgggcgtgtc gccgcgcttg gcggagagtg ccgcaccggc ggccttttgc
     2341 tgggctttcg atttggcagg catttgcggt ctcctttcga cgcataaacg ctcgaacgag
     2401 ccgaacgctt cgtaacgcct gagcactccc gaaatccgaa atcccctgct agggcttccc
     2461 gccgatgagt gacgagatca gccgcgagac gcccgaaggc atcgatctga aggtcgttta
     2521 cggaccggag gacgccaggg gaatcgaccc cggaaagccg ggcgagccgc cattcactcg
     2581 cggcccctat gcgacgatgt acgccgggcg cccgtggacg atccgccagt acgccggatt
     2641 ctccaccgcc gaagagtcca acgctttcta ccgccgcaat ttgaaggcgg ggcaaaaggg
     2701 cctttctgtc gccttcgacc tcgccaccca ccgcggctac gacagcgaca acccgcgcgt
     2761 tgccggcgac gtcgggatgg ccggcgtcgc catcgacacc gtcgaggaca tgaagctgct
     2821 gttcgacgga atcccgctcg acacgatgag cgtgtcgatg acgatgaacg gcgcggtgct
     2881 tccggtcatg gccttcttca tcgtcgcggg cgaggaacag ggcgtggccc acgacaagct
     2941 gaccggcacc atccagaacg acatcctgaa agagttcgcg gtccgcaaca cctacatcta
     3001 cccgcccgag ccgagcatgc ggatcgtcgc cgatatcatc gcctacacca atcgcgagat
     3061 gccgaagttc aactcgatct cgatcagcgg ctatcacatg cacgaggccg gggcgacggc
     3121 ggtgcaggag ctcgcctaca cgctcgccga cggcatggaa tatgtgcgcg tggcgatgaa
     3181 gcagggcctc gcgatcgacg aatttgcggg gcggctgagc ttcttcttcg gcatcggcat
     3241 gaacctgttc atggaagtcg cgaagctccg cgccgcgcgc accttgtggc accggattat
     3301 gaccgaactc ggcgcgaaaa acgacaagtc gaaagtgctc cgcacccact gccagacgag
     3361 cggagtcagc cttacggagc aggacgccta caacaatatc atacggacca cgattgaggc
     3421 gctcgcggcg gtgctcggcg gcacgcagtc gctgcacacc aacagcttcg acgaggcgat
     3481 tgcgctgccg acggatttca gcgctcgcat tgcgagaaac acgcagctga tcctcgccga
     3541 ggaaagcggg gtgaccgccg ttgccgaccc attgggcgga agctggtacg tcgagaagct
     3601 tacgcgcgag ctggaagaga aagcgtgggc gctgatcgag gaagtcgagg cgcacggcgg
     3661 gatgaccaag gcggtcgccg agggccttcc caagcatcgg atcgaggaag ccgcggctga
     3721 gcgcgcggcc aaagtcgata caggcgagac ggtgatcgtc ggcgtgaacc gctaccagcc
     3781 ggaaagcgag cccgagcacg acatcctcga ggtcgacaat gcccgggtcc gtgccggtca
     3841 gattgcccgg attgagaagg tgcgggcgag ccgcgacgaa gcaaaggcgc gtgcggcgct
     3901 ggacgccttg accgaaggcg cgaagggtga cgccaatctg ctcgcgctct ccgtcgaagc
     3961 ggcgcgggcg cgggcgacgc tcggggagat ttcggatgcg ctggagcgcg ccttcgggcg
     4021 ttacgatacg gtgcccgagc cggttcgcgg catctacggc aaggcgcgcg gcgacgatcg
     4081 ttggaaggcc gccgaacaag gcacgcgaag cgtcgccgat cgcctcggtc gaaagccgcg
     4141 catcctcgtc gccaagatgg ggcaggacgg gcatgaccgc ggcgccaacc tcgtctcctc
     4201 cgccttcacc gacctcggct tcgaagtgat ccccggcccg ctattccaga ccccgcggga
     4261 gaccgcgcag atggcggtcg aaaaggacgt ggacgtggtc ggcgcaagct cgctcgcggc
     4321 ggggcaccgg acgctgatcc cggagatgat cgatgcgctc aaggacttag ggagagccga
     4381 catcaaggtg gtcgctggcg gggtcatccc gccgcaggat tatgccgcgc tccgcgccgc
     4441 gggggtgcag gcgatcttcg gccctggcac caacctcgcc gacgccgccg acgaagtgct
     4501 ccgcctgctc ggccacaacc gccctccgct cgatgaggct gcggagtgaa gcaccgcatt
     4561 ggctgcatcg catttacgat tctcggattc acgtggctcg gattcttcct gttcgaatgg
     4621 ttcgcgacga cgatgggcga ttgtggcgat gaccaggctt gcaactttta tcgcggctac
     4681 gtggacgggt ttgttttctg gcgcggattg gccgtcgcgc tgctcttgat cctggcctat
     4741 ctcggcttcc gattcctcta caaggatgat gatgttcagt aagatcttga tcgccaatcg
     4801 cggggagatt gcgtgccgcg tgatccgcac cgcgcggcgc atgggcatca agaccgttgc
     4861 ggtatattcg gacgcggacg cgcgggctcc gcatgtgttg atggccgacg aa
//
LOCUS       DATAKH010000108         5962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2289,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000108 DATAKH010000000
VERSION     DATAKH010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5962
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2289"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..762
                     /locus_tag="VHN55_04490"
     CDS             112..762
                     /locus_tag="VHN55_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HEX2803224.1"
                     /translation="MSWTEERIEQLKRMWHDGATASEIADKLGGVSRNAVIGKAHRLG
                     LEARPSPVKPGEEKESPAPAKTARKAQPAPAHKPAAPKPKADPAPPIPGSPPARQQRT
                     GDQMQYRSVGPGGFIRQGPGDQQAPIPPAPPRRLVPAKPSPEVADKTGILDLNDRVCK
                     WPMGHPGEPDFYFCGQPANPGYPYCVEHCGVAYQAQLPRRDRRPPPPLPFGGPRVR"
     gene            870..1691
                     /locus_tag="VHN55_04495"
     CDS             870..1691
                     /locus_tag="VHN55_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017667355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2803225.1"
                     /translation="MVDQANPNKALWEKGDFTRIAETMRQSGEELVESLGIEPGMDVL
                     DLGCGDGTTALPEARRGANVLGVDIASNLVAAGNARAQAAGLSNLSFRQGDASNLEGI
                     ADESFDLVVSIFGAMFAPRPDDVAKEMVRVTRRGCRIVMGNWIPGDPTLVAQILRISS
                     AYTPPPPEGFVSPMAWGDEAIVTERFRSAGIAPGNIGFERAFWVFRSDDPPSRLLDTF
                     RNYYGPTMNAYAAAEKDGREAELHNELKALFESQNRGGSRSVIDATYLKVTAVRD"
     gene            1795..2532
                     /locus_tag="VHN55_04500"
     CDS             1795..2532
                     /locus_tag="VHN55_04500"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2803226.1"
                     /translation="MKRETTNAIRTVLEDWLPPVVRDSAAMRWLFRRHWGRLVDDLVS
                     FRSRIAFVSDEEYHSIYERMPRVQDETDNSAACIAEISKSIVGGTVLDVGCGTGYLVD
                     RLARDHPRRRFTGLDFIIEEGTRTRLKSIDFVEGKVEALPFADDSFDTVICTHLLEHV
                     LDFAGAVRELRRVARRRLIIVVPQEREYRFTFNPHVHFFPYPHSFLRYMTPVPSKYRC
                     EAIGRDIYYVEVPPAAQEVASPKRKAA"
     gene            2535..3764
                     /locus_tag="VHN55_04505"
     CDS             2535..3764
                     /locus_tag="VHN55_04505"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HEX2803227.1"
                     /translation="MPAGGRGTEGRAPRRFPAVELLLWAILAAAGFGLIVRDLMTANG
                     LLLPHGAVIGRDFVNVWAGARLAVSGHVEQIYSVGGYLAALEQMFGQRFDFHAFSYPP
                     ALLMFVWPLGLIGYLPALLLWIAATGGLLLVAARPFFARSGLPVWIAALLPASIVNIW
                     AGHHGFVVAAMWLLAFAAIPKRPLLAGLFLALLTVKPHMGVLIPLLLIVGREWRTIAA
                     AAAATACLFLTSVALFGWASWTTYVAVTAGVQSALLEQAQGFFLYMMPTPYVGFWLAT
                     GSFPLAVAAHVAFATAAIWIVVRAAVRTVEWPELGLMAATATFLVLPYAFNYDMAVVG
                     IAAAMLLYGRGSDLTPAERLAALLALAAPMLVLAANPLHLPIVPFALLAFLWTQARCY
                     AGLGSEPQQQQPALAAT"
     gene            3846..4253
                     /locus_tag="VHN55_04510"
     CDS             3846..4253
                     /locus_tag="VHN55_04510"
                     /inference="COORDINATES: protein motif:HMM:NF039992.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SxtJ family membrane protein"
                     /protein_id="HEX2803228.1"
                     /translation="MKQFADIELPSNRKFGFFMAAVLAAISAYLSTTHHSLATAVTAV
                     AALVLASLALLKPALLAPLNKAWMMLGAALGIVVSPVVLGILFFALFTPLALVLRMFG
                     RDELRLRRSPAGVSYWRLRTPPGPQPDSFRRQF"
     gene            4262..4414
                     /locus_tag="VHN55_04515"
     CDS             4262..4414
                     /locus_tag="VHN55_04515"
                     /inference="COORDINATES: protein motif:HMM:NF039953.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HEX2803229.1"
                     /translation="MGEFIGEFWAFLKHRKKLWLTPIVGLMILLGALLVIAKGSILAP
                     FVYTMF"
     gene            4422..>5962
                     /locus_tag="VHN55_04520"
     CDS             4422..>5962
                     /locus_tag="VHN55_04520"
                     /inference="COORDINATES: protein motif:HMM:NF014589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX2803230.1"
                     /translation="MYVLGISAWYHDSAACLVSDGRIVAAAQEERFTRLKHDPGFPAN
                     AIAYCLREAGIVPEKIDTIVFYEKPFPKFERLLETYLAFAPRGFRSFAAAMPVWIKEK
                     LFQKALLLQELESLFGKGGWRERLMFSEHHLSHAASAFYPSPFDHAAVLTLDAVGEWT
                     TTSWATGRGPELQIEREIHFPHSLGLLYSAFTYYCGFKVNSGEYKLMGLAPYGEPRYA
                     DLIREHLIDLRPDGSFHLDVSFFDYCTGRRMTNRRFDALFGGKPRKPESELTQRDMDL
                     AASIQAVTEEAVLNLGRTIASESGAKNLCLAGGVALNCVANGVLLREEVFENIWIQPA
                     AGDAGGSLGAALAAYHIAHGRPRERPSQGDGMQGAYLGPAFSAAETRSALDSAGANYE
                     QVDDDELVERTARALADGQAVGWMHGRMEFGPRALGARSILADPRSPTVQKQLNLKIK
                     FRESFRPFAPSVLREQLEEWFDLTVDSPYMQLVADVSDKRLVGLQEPEKMLAGLDKLG
                     VVRSQ"
BASE COUNT          957 a         2034 c         1894 g         1077 t
ORIGIN      
        1 aaggcgagga ttggggactg gcaggccggt cgatcacgct tggcgcctat cggctggcgt
       61 cgtgggcggc aaggcggccc tggaattttg aaagacccgg agtgaattcg aatgtcatgg
      121 actgaagagc gcatcgagca actcaagcga atgtggcacg acggcgccac cgccagcgaa
      181 atcgccgaca agctcggcgg ggtgagccgc aacgcggtga tcggcaaggc gcacaggctc
      241 gggctcgaag cgcgcccgtc gccggtcaag ccgggcgagg aaaaggaatc gccggcgccc
      301 gcaaaaacgg cgaggaaggc gcagccggcg cccgctcaca agcccgccgc gccaaagccg
      361 aaggcagatc cggcgccgcc catccccggc tccccgcctg cgcggcagca gcggacaggc
      421 gaccagatgc agtatcgctc ggtcggcccc ggcggcttca tccgtcaggg gccgggcgac
      481 cagcaggcgc cgatcccgcc tgcgccgccc cgccgcctgg tcccggccaa gccgagcccg
      541 gaggtcgccg acaagaccgg cattctcgac ctcaacgacc gggtctgcaa atggccgatg
      601 ggccatcccg gcgagcccga cttctatttc tgcggccagc ccgccaatcc aggctatccc
      661 tattgcgtcg agcattgcgg ggtcgcctac caggcgcagc tcccgcgccg cgaccgccgt
      721 ccgccgccgc cgcttccctt cggcggcccg agggtccgct aggtccgcgg ctttcagcgc
      781 aacaatcagg acgctcccga cctccgaatt gcctagcggg cggccaccgg tcgccctagg
      841 aggcgatctg gcgacggaga ctcggaaaaa tggtcgatca ggcgaacccc aacaaggcgc
      901 tttgggaaaa gggcgacttc acccgcattg ccgaaacgat gcggcaaagc ggcgaggagc
      961 ttgtcgagag cctcggcatc gagccgggaa tggacgtcct cgatctcggc tgcggtgacg
     1021 gaaccaccgc cctgcccgaa gcccggcgcg gagccaatgt gcttggtgtc gacattgcct
     1081 cgaacctggt cgccgccggc aacgcgcggg cgcaggccgc gggcctgtcc aacctcagct
     1141 tccgccaggg cgacgcctcc aatctcgagg gcatcgccga cgagagcttc gacctggtgg
     1201 tgagcatctt cggcgcaatg ttcgccccgc gacccgacga tgtcgcgaag gagatggtgc
     1261 gggtcacccg ccgcggctgc cggatcgtta tgggcaattg gattcccggc gaccccacgt
     1321 tggtcgcgca aatcctcagg atcagctccg cctacacgcc gccgccgccc gaaggcttcg
     1381 tgagcccgat ggcctggggc gacgaggcga ttgtcaccga acgattccgc tccgccggaa
     1441 ttgcccccgg caatatcgga ttcgagcgcg cgttctgggt gttccggtcc gacgatccgc
     1501 cgtcgcggct gctcgacaca ttccgcaatt attacggtcc gacgatgaac gcttatgcgg
     1561 cggcggaaaa ggacggccgc gaagccgagc tccacaacga gctcaaggcc ctgttcgaat
     1621 cgcagaaccg cggcgggtcc aggtcggtga tcgacgccac ctatctcaag gtcaccgcag
     1681 ttcgggatta aatccaggat cgcgcggccg cggcggcgtc tcgagccgct ccgcgcattt
     1741 acgtttcggt aaccataagc ccggtacctc ttcccccttg ggggagaagc ggcgatgaag
     1801 cgcgagacga ccaacgccat ccgcacggtg cttgaggact ggcttccgcc cgtggttcgg
     1861 gattcggcag ccatgcgctg gctgttccgc cgccactggg gccggctggt cgacgacctc
     1921 gtaagcttcc gaagccggat cgctttcgtg tccgacgagg aatatcattc gatctacgaa
     1981 cgcatgccgc gggtccagga cgagaccgac aacagcgccg cctgcatcgc cgaaatcagc
     2041 aagtcgatcg tcggcggaac cgtcctcgat gtcggctgtg gcaccggcta cctggtcgac
     2101 cggctcgccc gcgatcatcc gcgccgccgg ttcaccgggc tcgacttcat catcgaggag
     2161 ggcacccgaa cccggctcaa gtcgatcgat ttcgtcgaag gcaaggtcga ggcgcttccg
     2221 ttcgccgacg acagcttcga caccgtcatc tgcacgcact tgctcgagca tgtgctcgac
     2281 ttcgccggag cggtccgcga gcttcgcagg gtcgcgcggc ggcgactgat catcgtcgtt
     2341 ccgcaggagc gtgaatacag gttcacgttc aacccgcacg tccacttctt cccctatccg
     2401 cacagcttcc ttcgctacat gaccccggtg ccgagcaagt accggtgcga ggcgatcggc
     2461 cgcgacattt attatgtcga ggtcccgccg gcggcgcagg aagtcgcttc gccgaagcgg
     2521 aaagcagcct gaccttgccc gcgggcggac gcggcaccga aggccgcgcc ccgcggcggt
     2581 tcccggcggt agaattgctg ctctgggcga tcctggccgc cgccggcttc gggctcatcg
     2641 tccgggacct gatgaccgcg aacggcctgc ttctgcccca cggcgccgtc atcggccgcg
     2701 acttcgtcaa tgtctgggcc ggcgcaaggc tcgccgtcag cggccatgtc gaacaaattt
     2761 attcggtcgg cggctatctc gccgcgctcg agcagatgtt cggccagcgc ttcgatttcc
     2821 acgctttttc ctatccgccg gcgctgctga tgttcgtctg gccgctgggc ctgatcggct
     2881 acttgcccgc gctgttgctg tggatcgccg ccaccggcgg gcttctgctg gtcgcggcgc
     2941 ggcccttttt cgcccgcagt ggccttccgg tatggatcgc ggcgctgctc ccggcttcga
     3001 tcgtcaacat ctgggccggc caccacggct tcgtggtcgc cgcgatgtgg ctgcttgcgt
     3061 tcgccgccat ccccaagcgg ccgcttctcg ccggcctctt cctcgctctg ctcacggtta
     3121 agccgcacat gggagtcctg atcccgctgc tccttatcgt tggccgggaa tggcgaacga
     3181 tcgccgcagc cgcagcggct accgcctgcc tcttcctgac cagcgtcgcg ctgttcggct
     3241 gggcgagctg gacgacctat gttgcagtca ccgccggcgt tcagtcggcg ctgctcgagc
     3301 aggcccaggg attcttcctg tacatgatgc caacgcccta tgtcggcttc tggctggcga
     3361 ccggaagctt ccctctagcg gtcgccgcgc acgtcgcttt cgcgaccgct gcaatctgga
     3421 tcgtggttcg agcggccgtt cgcacggtcg agtggcccga gctcggcctg atggccgcca
     3481 ccgcgacctt cctcgtcctg ccctatgcct tcaattacga catggcggtg gttgggatcg
     3541 ccgccgcgat gctgctctac gggcgcggaa gcgacctcac gccagccgag cggctcgcgg
     3601 cgctgcttgc cctcgccgcg ccgatgctgg tccttgcggc aaatccgctg cacttgccca
     3661 tcgtcccgtt cgcattgctc gctttcctgt ggacgcaggc gcgctgttac gccggactcg
     3721 gcagcgagcc gcagcagcag cagcccgcgc tggccgcgac ctgaagcgct tccccgtgcg
     3781 tgtggatcac cgcgatccct tctgttaggc tgccgctcag tcgacagcgc cgcagcgggg
     3841 acagcatgaa gcagtttgcg gacatcgagc tgccctccaa tcgcaagttc gggttcttca
     3901 tggccgctgt cctggctgcg atctccgcat atctctcgac gacgcaccat tccctcgcaa
     3961 cggccgtaac ggccgtggca gcgttggtgc tcgcttcgct cgccttgctc aagccggcgc
     4021 tccttgcgcc gctgaacaag gcgtggatga tgctgggggc agcgctcggc attgtcgtca
     4081 gcccggtcgt cctcggaatc ctgtttttcg cactgttcac gccgctggcg ctcgtgctgc
     4141 gcatgtttgg ccgcgacgag ctgcgccttc gccgttcgcc ggcgggggtc agctattggc
     4201 gactccgaac gcctcccggc ccgcagccgg attccttccg caggcaattt tgagactcct
     4261 ggtgggtgag ttcatcggcg agttctgggc cttcctgaag caccggaaga agctttggct
     4321 gactcccatc gtcgggttga tgattctgct gggggcgctc ctcgtgatcg caaagggctc
     4381 gatcctcgca cccttcgtct acaccatgtt ctaagccgcg gatgtacgtc ctcggcattt
     4441 ccgcctggta tcacgacagc gcggcctgcc tggtgtcgga tggccgtatc gtcgccgccg
     4501 ctcaggagga acggttcacc cgcctgaagc acgatccggg attcccggcg aacgccattg
     4561 cctattgcct gcgagaagcg gggattgtcc ccgaaaagat cgacacgatc gtcttttacg
     4621 aaaagccgtt cccgaagttc gagcggcttc tggagaccta cctggctttc gcgccgcgcg
     4681 gcttccgaag cttcgccgcg gcgatgcccg tttggatcaa ggagaagctg ttccagaagg
     4741 cgctcctgct gcaggagctg gagtcgctgt tcggcaaggg cggctggcgg gaacggctga
     4801 tgttctccga acaccatttg tcgcacgcgg ccagcgcctt ttacccgtcg cctttcgatc
     4861 atgcggcggt gctgacgctc gacgcggtcg gagaatggac gaccacctcc tgggcgactg
     4921 ggcgcggccc cgagcttcag atcgagcgcg agatccactt cccccactcg ctcggcctcc
     4981 tctactcggc cttcacttat tattgcggtt tcaaggtcaa ttccggagag tacaagctga
     5041 tgggcctcgc gccctatggc gagccccgat acgccgattt gatccgcgag cacctcatcg
     5101 acctgcgccc cgacggcagc ttccatctcg acgtatcctt tttcgattat tgcacgggca
     5161 ggcggatgac caaccggcgc ttcgacgccc ttttcggcgg gaaaccccgc aagccggaat
     5221 ccgagctgac ccagcgcgat atggacctcg cggcgtcgat ccaggcggtg acggaggaag
     5281 ccgtgctcaa cctcggacgc acgatcgcca gcgaaagcgg tgcaaagaac ctgtgcctcg
     5341 ccggaggagt cgcgctgaac tgcgtcgcca acggagtgct gctgcgggaa gaggtgttcg
     5401 agaatatctg gatacaaccg gcggcaggcg acgccggcgg ctcgctgggc gcggcactgg
     5461 ctgcctatca catcgcccac ggccggccgc gagagcgccc ttcccaaggg gatggaatgc
     5521 agggcgccta tctcggcccc gcgttctcgg ccgccgagac ccgctcagcg ctcgattcag
     5581 cgggtgcgaa ctatgagcaa gtcgatgacg acgagcttgt cgagcgaacc gctcgggcgc
     5641 tggcggacgg ccaggcagtc ggatggatgc acggccgaat ggaattcggg ccccgggcgc
     5701 tgggagcgcg gagtattctc gccgatcctc gctcgccgac cgttcagaag cagttgaacc
     5761 tcaagatcaa gttccgcgag agcttccgcc ctttcgcccc gagcgttctg cgcgagcagc
     5821 tcgaagagtg gttcgacctg acggtcgaca gcccgtacat gcagctcgtc gccgatgtct
     5881 cggacaagcg gctggtcggg cttcaggagc ccgagaaaat gcttgcgggc ctcgacaagc
     5941 tcggggtcgt ccgctcgcaa at
//
LOCUS       DATAKH010000109        14905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21097,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000109 DATAKH010000000
VERSION     DATAKH010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 14905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14905
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21097"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VHN55_04525"
     CDS             <1..697
                     /locus_tag="VHN55_04525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HEX2803231.1"
                     /translation="SQRGWIRAMKGHLALDEMDQIKWREGDGPYIHFHAQTTDRMALF
                     ADNGRVYTLSGDKLPGGRGFGEPVRLQIDLEPEVEVVNLLAISPGMKLLVASSDGRGF
                     ITAGDSTLAETRKGKQLVNLRSGAKVAVVRPVPDGADAVAIVGENRKLLVFALSDLPE
                     LGRGQGVMLQRYRDGGLSDALAFRLADGLSWSLGGDSGRTRTETDLTPWRAARGAAGR
                     MPPVGFPRSNRFS"
     gene            800..2551
                     /locus_tag="VHN55_04530"
     CDS             800..2551
                     /locus_tag="VHN55_04530"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2803232.1"
                     /translation="MQAAEQRTGMPARARPSYAPGGTPAHAAGGDTALLSALPIAAAV
                     VGQSSDGALKILSHNSRFVEAVNRSTCSAIDWDDAECLKSGPVADLFEQYFADPLSTG
                     ELDIKDGEGVAARFLRIRLAPLPNHSGSMPRCLMSLVDRTAEVQSERTLRAEMLRDSL
                     TGLPNRLAFSEEIERKGIENGSDHRHAVLVIDVLRFSRINESMGSIAGDELLITFARR
                     LMSALGTGDVLARTGGNEFGVLVELRQGVADALNAADRIHEAMTAAFHISELDIRIEC
                     AVGVALMQHGQDAEELFRNAQFAVKQAKQTGKPQIYEPKEASLARRRFSIETELRRAL
                     ESDQLELFYQPLINLASGDVAGFEALARWTHPDRGEVSPCEFIPVAEESGLILQLGRW
                     AMDKALHTLSQWDAKAGRQLPLYVGVNLSAIQLARDDVAAMVESSLRSTGLGGNRLTL
                     ELTESSIIQDPERAMRVFEALKALDTTVAMDDFGTGYSSLAYLQRLPIDVLKIDKSFV
                     SGMMVDPDAVAIVRAVLKLADALRMSTTAEGIETVELATTLATLGCDHGQGFYFARPL
                     EADAAFDFLQSRGSQPR"
     gene            complement(2558..3067)
                     /locus_tag="VHN55_04535"
     CDS             complement(2558..3067)
                     /locus_tag="VHN55_04535"
                     /inference="COORDINATES: protein motif:HMM:NF025710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4402 domain-containing protein"
                     /protein_id="HEX2803233.1"
                     /translation="MGLRLANIAAAAAASAAALVAPANAATVEAKVKATVVKPLVIRS
                     IQDLDFGTVVLGPGTWSGATINLSRTGVLSCPVSVTCSGATQAATYNIAGSNHQTVVI
                     SAPDIVLVNQRDPRSTLTLVVDSPATVTLTNSGVQGLDFSIGGSISVDSTTSDGDYAG
                     TFDVTADYQ"
     gene            complement(3154..4299)
                     /locus_tag="VHN55_04540"
     CDS             complement(3154..4299)
                     /locus_tag="VHN55_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010185229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEX2803234.1"
                     /translation="MAKLLDALGADEGLTRYVGGAVRDDLLGLPVSDVDLATQLRPDQ
                     VVERLQAAGIKAVPTGFDHGTVTAVSDGHPYEVTTLRRDVETFGRHATVAFTDDWKED
                     AARRDFTINALMADAATGEVFDYFHGLDDLEERHVRFIGDAFERIAEDHLRILRFFRF
                     HARFGRGEPDEVALAACTARANDLMALSRERIADELLKLLSVENPLATVRVMLQRNIL
                     KPVIPEIEADASRSLQALIEAEASADIEPDPLRRLTALLPRDPKIGGAVAVRLKLSNR
                     ARKRIACAADPEISEPRASAYREGSECAVDRLLLAGRPSDAKAAAAWTPPRLPISGGA
                     LIARGLVEGPIVSRTLRQIEDRWIERGFPTGAEFEAIVEEALAPNLR"
     gene            complement(4335..4916)
                     /locus_tag="VHN55_04545"
     CDS             complement(4335..4916)
                     /locus_tag="VHN55_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEX2803235.1"
                     /translation="MTLSERLRKDLAAPAELSPIAGDLPEPLATASTAAAVLIAVTDR
                     SQPGVLLTVRRENLRTHAGQVAFPGGRIDPGEDAATAAIREANEELGLDPSVVEPVAM
                     LEEYRTVTGYIVTPLVAVIPPDLALAPHEPEVADWFEAPLARLLDPIHQRLETAVFAG
                     RERRYWVIEWNERRIWGATAAMLVNLSRRLQWT"
     gene            4967..5695
                     /locus_tag="VHN55_04550"
     CDS             4967..5695
                     /locus_tag="VHN55_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2803236.1"
                     /translation="MQEPRTAIVTGAGKRVGADVAAALAERGWTVLAHVRRNGDAVPT
                     GAQAVAAELDRPDCADRIFEAAEGLPPVRLLVNNASRFAWDGLGDFSADEFDAHMHTN
                     VRAPILLIQALAARHRGGDGLVVNLLDSKLAALNPDFLSYTVSKHALLGVTELAARAL
                     AAKRIRVNAIAPGLILKSPGQSEENFRAMHERNPLGRGVTTADIVAAIDYLVAATAVT
                     GEVLTIDSGQRFNPPERDVQFLEP"
     gene            5695..6114
                     /locus_tag="VHN55_04555"
     CDS             5695..6114
                     /locus_tag="VHN55_04555"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEX2803237.1"
                     /translation="MEKPKLAGLVPDALRPQSAKILLDSLEVMADIGFHDFEIGVPQR
                     LLVTVEVWLEDASAPAGDDPALAWDYDHVRRQVAELAAERRFNLQETLAEAIYLRLAA
                     MRGVRAIRVTTSKPDIYANARGVGVEFASFKGDSPDS"
     gene            6342..6956
                     /locus_tag="VHN55_04560"
     CDS             6342..6956
                     /locus_tag="VHN55_04560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017181483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX2803238.1"
                     /translation="MAIIIVVVIQFLLGYAIVTGLAYNVIKQAAEDLKTFDVEEEPPP
                     PEEEPPPPPEKVAQQPPPVVSPPPIVRTTQVAPVIETVREAPPPIITPRAPPAPPPPP
                     APPAKVTRAQGAKGNLQSYFSASDYPQDAARREETGTTGVRLSIGTDGRVTNCTVTRS
                     SGSTSLDNAACRILRSRARYTPAKLSNGEPTTDTATGSITWRLE"
     gene            7003..7842
                     /locus_tag="VHN55_04565"
     CDS             7003..7842
                     /locus_tag="VHN55_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX2803239.1"
                     /translation="MAILQLTAAAAAAPAGENPYGLLPALQQGGIIAWSVFVILVGMS
                     IFSFYILFTKLMQQQKIIAQGRKVRASFWNSTNLREAAGKLDEKSAYRSIVDDTLLAQ
                     EQHGKLTDPIDQHDWMANSLARSQGAIGARLGEGLAFLATVGSTAPFIGLFGTVIGIY
                     RALIKIGASGQASIDTVAGPVGEALIMTALGLVVAVPAVLAYNWLIRRNKSIMEDLAA
                     FTNDLHGYVMSGGSVRPRFGPEKAATGSRTGAPTATAGNPGGARQPLRTGATQTGAET
                     PTS"
     gene            7918..8400
                     /locus_tag="VHN55_04570"
     CDS             7918..8400
                     /locus_tag="VHN55_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007705979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX2803240.1"
                     /translation="MAVNVGPSEGEEEAMSDINVVPLVDVMLVMLIIFLITVPVVLQT
                     VPVTLPSVRYEPTTTKPENVNLSVKGDGSGGCEVYWNLTKVNSEELLDKAVKKLEEQI
                     AKVGGAENLTEDTMPEAHIRGDVDTPYKCIGGAVFTMQRAGFARIGFISEPAPNTAAN
                     "
     gene            8423..8845
                     /locus_tag="VHN55_04575"
     CDS             8423..8845
                     /locus_tag="VHN55_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX2803241.1"
                     /translation="MQTTSDNPQGEPMLDINMTPLIDVLLVLLIMFIITLPVQTHAVK
                     LDLPQDSQNNPPPILPTKNKIVITADNQILWNGTPVNPEQLRLYLDATQQIDPLPELH
                     LQPEPNAKYALVDEVLAITKRAHVEKMGFVGNEAYANF"
     gene            8956..10311
                     /gene="glmU"
                     /locus_tag="VHN55_04580"
     CDS             8956..10311
                     /gene="glmU"
                     /locus_tag="VHN55_04580"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010187082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEX2803242.1"
                     /translation="MTRVPDFAVVVLAAGQGTRMRSDTHKVLHPIASRPLLLHLLDCI
                     DGIGASKRVVVVGKGRDQVERTLNGSDVAIVHQAEQKGTGHAVLQAKAALDGYEGAVL
                     VLYADTPFVQPATLERMLERLDGDDGPGIVVLASQPADPAAYGRIILGEGDRIAKMVE
                     FRDATPEERAVRLCNSGMMAVRARDLFDWLGKVGNDNAAGEYYLPDIVNIAAAEGREA
                     VVIEGGAYETAGVNSRAELAHLELEWQRRRREQVLQEGATLIDPESVWFAYDTKLGRD
                     VTVEPHVVFGPGVEVADGATIKAFSHIEGAVIGARAAIGPFARIRPGTLLADGSKVGN
                     FVELKKATVARGAKVNHLSYVGDSQVGENANIGAGTITCNYDGFGKYRTIIGAGAFIG
                     SNTSLVAPVTIGEGAVVGAGSVITSDVEPDSLAVERSEQKGIAGWARRFRERMSRKAA
                     E"
     gene            10312..12135
                     /gene="glmS"
                     /locus_tag="VHN55_04585"
     CDS             10312..12135
                     /gene="glmS"
                     /locus_tag="VHN55_04585"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007709913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEX2803243.1"
                     /translation="MCGIVGIVGKAEVATRLFDGLKRLEYRGYDSAGICTIEDGAFER
                     RRAEGKLENLKRALGSDPLGGLVGIAHTRWATHGAPTVGNAHPHIVGPVALVHNGIIE
                     NFKPLRDELIAQGRKFESETDTEVVGHLVAREIEQGQSPNEAVAAVLPRLQGAFAIAF
                     LFRDDPDLIIGARMGAPLTVGYGEGENYLGSDAIAVAPWTQRIAYLEEGDWAVVRRDR
                     IEIFDRDNAPVEREIVESGASSAPVEKGNYRHYMQKEIFEQPVVVAQTLQSYLRPFEG
                     EVALPNVDFDLGAIDRLTIVACGTSYYAGLVAKYWIEQFARVPVDIDVASEFRYRDPV
                     LEPGGLALFVSQSGETADTLAALRHAKDQEQRIAVVVNVPTSSMAREADLLLPTHAGP
                     EIGVASTKAFTCQLAVLAALAANLACSRGRIGRDEEKNIVAHLHEAPAALNAALNHDD
                     DIAAMAHLIAPARDVLYLGRGPYYPMALEGALKLKEISYIHAEGYAAGEMKHGPIALI
                     DEDVPVIVLAPSGPLFEKTVSNMQEVRARGGKIVLISDSKGIDEAGDGCIATIEMPEV
                     HPLIAPIVYAVPVQLLAYHTAVLKGTDVDQPRNLAKSVTVE"
     gene            complement(12136..13047)
                     /locus_tag="VHN55_04590"
     CDS             complement(12136..13047)
                     /locus_tag="VHN55_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX2803244.1"
                     /translation="MPMDWNDLRFFLAVAREGSTLAAARQMRVSQTTVARRIAALEAA
                     LGFPLFEKRQAGYALTPAGEELVGKAEQVEISVAKFGQAASANARDLSGTVRITTEEI
                     YAITLLAPLLTQLREIHPDIVIDLDTSQTVRDLGAGDADISLRSTANKKQPAGLVGRQ
                     LCVDDWALYCSRDYAARHGVPSTVRELKRHAFIGGGGGNLWLHYQAWLKELGLEQQVA
                     MHHATSGGLLSGVRSGFGVAVLPCISADAELDLVRCLPPRPKHGRILWLFTHERVRHT
                     PRVRAVIDFLYDELSRHVRMLKAKKAA"
     gene            13177..13518
                     /locus_tag="VHN55_04595"
     CDS             13177..13518
                     /locus_tag="VHN55_04595"
                     /inference="COORDINATES: protein motif:HMM:TIGR04433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UrcA family protein"
                     /protein_id="HEX2803245.1"
                     /translation="MKQTLKIIAVSALATAALIKAVPALSEPVPAELNVSVVRTGDLN
                     LSTGEGQRRLQQRLVTAAHAVCDGASAADLRAQNAERQCRDEVLAAARSRVGEIVADK
                     KGGSIILAANK"
     gene            13526..14488
                     /locus_tag="VHN55_04600"
     CDS             13526..14488
                     /locus_tag="VHN55_04600"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX2803246.1"
                     /translation="MSAVVSPATLVLENGGNLNGFLYPVRGVEVSMGCHQPLAASSID
                     SERNYVSDYWNDGYAVIRGLFSRDEVAAIAAAADQIHDEGVRHGRSFRHGNLFYNVAA
                     GAAGEPLVRMVQWPSYHQPVLNSVRLDSRIAALLDPLLGGDLKQIINQLHWKAPGSLG
                     DFAWHQDSRSRRPAWAYRNLADSYVQTGLAIDPHGPECGGLRFIPGSHLQGDLGMDCS
                     KKALGTPLQDQALEEVGLRSEDAVDLVLQPGDLALWSPYLVHGSGENRSSHMRRFYIN
                     GYVRAQDCDRGEWAFRKGEPVALGPEPALVHYEELRERPEPHYV"
     gene            14493..14876
                     /locus_tag="VHN55_04605"
     CDS             14493..14876
                     /locus_tag="VHN55_04605"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX2803247.1"
                     /translation="MKASGGCHCGSVRFEAELGEPPVPALDCNCSVCRMTGFLHIVVP
                     HERFELVTGRDSLASYRFGTGAAEHLFCALCGVKSFYQPRSHPDSWSVNANCLDEPVE
                     LAIEQFDGRNWNEAKARLDAGTGGG"
BASE COUNT         2712 a         4806 c         4800 g         2587 t
ORIGIN      
        1 gtcgcagcgc ggctggatcc gggcaatgaa agggcacctc gcgctggacg agatggacca
       61 gatcaagtgg cgcgaaggcg acgggccgta catccacttc cacgctcaga ccaccgacag
      121 gatggcgctc tttgccgaca atggccgggt ctacacgctg tccggagaca agcttccggg
      181 cgggcgcggc tttggcgagc cggtgaggct tcagatcgat ctcgagccgg aggtcgaggt
      241 ggtcaacctg ctcgccatat cgccagggat gaagctgctc gtcgcttcct ccgacgggcg
      301 aggtttcatc acggctggcg actccacgct cgccgaaacg cgcaagggaa agcaactagt
      361 gaacttgcgt tccggtgcca aggtggcggt ggtccggcct gtgccggacg gcgccgacgc
      421 ggttgcgatc gtcggcgaga accgcaagct tctcgtcttt gcactgtcgg accttcccga
      481 gcttgggaga gggcagggcg tgatgctcca gcgctatcgc gacggcggac tgtccgacgc
      541 acttgcattc cgcctggccg acggcttgag ctggagcctt ggcggggata gcggtcgaac
      601 gcgcactgaa accgacctta cgccctggcg tgcggcacga ggcgcagccg gccgaatgcc
      661 gccggtcgga tttccacgaa gcaaccgttt ctcctgaccc gttagtcgag gccgcgttgc
      721 cggtttgcca cagacggtac cttccgctcg cgtcacaacg gatactttcg attaacctgc
      781 ctcgttcata cgggcgacca tgcaggctgc agaacagcga acgggaatgc cggcccgagc
      841 gcgcccgagc tacgcgcccg gcggtacgcc cgcgcatgcg gccggtggcg acacggcgct
      901 tctcagtgcg cttccgatcg cagccgcggt cgttggccaa agttcagacg gcgcgctgaa
      961 aattctctcc cacaacagcc gcttcgtcga agccgtgaac cggtccacct gcagcgcgat
     1021 cgactgggac gacgcggaat gcctgaagag cgggccggtc gccgacctgt tcgagcaata
     1081 tttcgcagac ccgctctcga cgggcgaatt ggatatcaag gacggcgaag gcgtcgcggc
     1141 ccgctttctc cgaatccggc tggcgccgct tccgaaccat tccggatcga tgccgcggtg
     1201 cctgatgagc ctcgtcgacc gcactgccga agtgcagtcg gagcgcaccc ttcgagccga
     1261 gatgcttcgc gacagcctca ccgggctgcc caaccggctc gccttctccg aagagatcga
     1321 gcgcaagggg atcgagaacg gcagcgacca tcgccatgcc gttcttgtca tcgatgtgct
     1381 ccgcttcagc agaatcaatg agagcatggg cagtattgcc ggggatgagc tgctgatcac
     1441 tttcgcaagg cgcttgatgt cggcactcgg cacaggtgac gtccttgccc gcaccggcgg
     1501 caacgaattc ggggtgcttg tcgagcttcg tcaaggagtt gcggatgcgc tcaacgcggc
     1561 tgaccgaatc cacgaggcga tgacggccgc cttccatatt tcggaactcg acatccgcat
     1621 agaatgcgcc gtcggcgtgg cgttgatgca gcacggccag gacgccgagg agctgttccg
     1681 aaacgcgcaa tttgccgtca agcaggccaa gcagaccggg aagccgcaga tctacgagcc
     1741 gaaagaggcg agtctcgccc ggcgcagatt ttcgatcgag accgagctcc gtcgtgcgct
     1801 ggaaagcgac cagctggagc tattctacca gccactgatc aaccttgctt cgggcgacgt
     1861 tgctgggttc gaggcgctag cgcgctggac tcatccggac cggggggaag tttcgccctg
     1921 cgagttcatt ccggtcgccg aggaatcggg cctgatcctg cagctcggcc gctgggcaat
     1981 ggacaaggcg ctgcacacgc tgtcgcaatg ggacgcgaag gcggggcggc aactgccgct
     2041 gtacgtcggt gtcaacctgt cggccatcca gcttgcgcgc gacgatgtcg cggccatggt
     2101 cgaaagttcg cttcgctcta cgggactagg cggcaaccgc ctcaccctcg aattgacgga
     2161 aagctcgatc atccaggatc cggagcgcgc catgcgggtg ttcgaggcgc taaaagcact
     2221 cgacactacc gtcgccatgg acgacttcgg gaccggctat tccagtctgg cctatttgca
     2281 gcggcttccg atcgacgttc tcaaaatcga caaaagcttc gtctcgggga tgatggtcga
     2341 cccggacgcg gtcgcgatcg ttcgagcggt cctcaagctt gccgacgcct tgcggatgtc
     2401 gacgacggcg gaaggaatcg agacggtcga gctcgcgacc actcttgcta ccctcggctg
     2461 cgaccacggc cagggcttct acttcgcccg gccgctcgag gcagacgcgg cattcgactt
     2521 cttgcagtct cgcgggagcc aaccccgcta gcgcatccta ttggtagtcg gccgtgacgt
     2581 cgaaggtgcc ggcataatcc ccgtccgagg tcgttgaatc aacgctgatc gagccgccga
     2641 tcgaaaagtc caggccctga acgcccgagt tggtgagggt gaccgttgcc ggactgtcaa
     2701 cgaccagcgt cagcgtcgag cgggggtcgc gctggttcac cagcacgatg tcgggcgcgc
     2761 tgatgaccac ggtctggtgg ttcgacccgg caatattgta ggtcgcggcc tgcgtagcgc
     2821 ccgagcaggt gacgcttacg gggcagctca ggacgcctgt ccgcgacagg tttatcgtcg
     2881 ctccggacca tgtgccgggg ccgagcacga cggttccaaa atcgagatcc tgtatcgacc
     2941 tgatcactag cggcttgacg acggtggcct tcaccttggc ctcgaccgtg gccgcgttcg
     3001 cgggcgcaac gagggcggcc gctgaagcgg ctgctgcggc agcaatattg gcaaggcgca
     3061 gccccactct tcgcctccac tgcggcgacc ggcccgaaga tggtgatcgc gcgattaacc
     3121 gcgtggaaat agccggagcg aatttagagc gggttaacgc aagttgggcg cgagtgcctc
     3181 ctcgacaatc gcttcaaact cggcaccggt ggggaatccg cgctcgatcc agcgatcctc
     3241 tatctgcctc aatgtgcgcg agacgatcgg tccttcgacc aggccgcgcg caataagggc
     3301 gccgccgctg atcggcaggc gcggcggtgt ccaggcggcg gctgctttcg catcgcttgg
     3361 ccggccggcg aggaggagcc ggtcgaccgc acattcgctc ccttctcgat atgcgcttgc
     3421 ccgaggctcc gaaatttccg gatcggcggc gcaagcaatg cgcttcctgg cgcggttcga
     3481 cagtttgagt cggacagcga cggcgccccc gatcttggga tcgcgcggaa gcagcgcggt
     3541 cagtcgtcgg agcggatccg gttcgatatc ggcggacgct tctgcctcga tcagcgcctg
     3601 caacgatcgc gacgcgtcag cctcgatttc cgggatgacg ggcttcagga tgttccgctg
     3661 aagcatcacc ctcactgtcg ccagcggatt ttccaccgac aggagcttaa gcagctcgtc
     3721 ggcgatgcgc tcgcgggaca gggccatcag gtcgttcgct cgcgccgtgc atgcggcaag
     3781 cgccacctcg tcgggctcgc cgcggccgaa gcgggcgtga aagcggaaaa aacgcaggat
     3841 ccgcaaatga tcctcggcga ttcgctcgaa cgcgtcgccg atgaacctca cgtgccgttc
     3901 ctcaagatcg tccagcccgt ggaaatagtc gaacacctcg ccagtggcgg cgtccgccat
     3961 cagcgcgttg atcgtgaaat cgcgccttgc ggcatcctct ttccaatcgt cggtgaacgc
     4021 gaccgtggcg tggcggccga aggtttcgac gtctcggcgc agcgtcgtca cctcgtacgg
     4081 gtggccgtcg ctgactgcgg tgacggtgcc atggtcgaag ccggtcggca ccgccttgat
     4141 cccggccgcc tgaagacgct cgactacctg atccgggcga agctgggtgg cgagatcgac
     4201 gtcgctgacc ggaaggccga gaaggtcgtc gcgaacggct cccccgacgt agcgggtgag
     4261 cccctcgtcg gcgccgagcg cgtcgagaag cttggccatg ccccgccgcc gccgccatcg
     4321 cccggcgtcg agcttcacgt ccactgcagc cgccgcgaca ggttaaccag cattgccgca
     4381 gtcgctcccc agattcgccg ctcgttccat tcgatcaccc agtagcggcg ctcgcggccc
     4441 gcgaaaacag ccgtctccag ccgctggtga atcggatcga ggagtcgggc gagcggcgct
     4501 tcgaaccagt ccgcgacttc cggttcgtgc ggcgcgagcg cgagatcggg cgggatgacg
     4561 gcaaccagcg gggtgacgat gtagccggtt acggtgcgat attcctccag catcgcgacc
     4621 ggctcgacga ccgaaggatc gaggccaagc tcttcgttgg cctcgcggat cgctgccgtt
     4681 gccgcgtcct cgccggggtc gatacgccct ccggggaatg cgacctggcc ggcatgagtg
     4741 cgcaaattct cgcgcctgac ggtgagcagg actcccggct gcgagcggtc ggtgacggcg
     4801 atcagcaccg cagcggccgt cgaagcggtg gccagaggct cggggaggtc gcccgcgatc
     4861 ggcgacagct cggctggagc ggcaaggtct ttgcgaaggc gctcggacag ggtcatcggc
     4921 atggttgtgg attgcgtcgc ttcgctggca atgacaacta gcgggcatgc aggagccgcg
     4981 aaccgcgatc gtaaccggcg ccggcaagcg ggttggcgcg gatgtcgccg ctgcgctcgc
     5041 cgagcgcggc tggacggtcc tcgcccacgt tcgccgcaac ggggacgcgg tgcccaccgg
     5101 cgcccaagcg gtcgctgccg agctagacag gcccgactgc gcggacagga ttttcgaagc
     5161 cgccgaaggc cttccgccgg tgcgcctgct ggtcaacaat gcgtcgcgct ttgcatggga
     5221 cgggctgggc gacttcagcg ccgacgagtt cgacgcccac atgcacacca acgtccgcgc
     5281 gccaattctt ctgatccagg cgctggctgc tcgtcaccgg ggcggcgacg ggctggtcgt
     5341 gaatttgctc gattcgaagc tggccgcgtt aaatcccgat ttcctcagct atacggtctc
     5401 caagcatgca ctgcttggcg tgaccgagct tgccgctcga gcgctcgccg ctaagcgaat
     5461 ccgggtcaat gcgatcgcgc ccggactgat cctgaaatcg cccggtcaaa gcgaggaaaa
     5521 tttccgggcc atgcacgagc gcaacccact cggtcgcggg gtgaccaccg ccgatatcgt
     5581 cgccgcgatc gattatctcg ttgcggcgac ggcggttacc ggcgaggtgc tcaccatcga
     5641 ttccggacag cggttcaacc cgccggaacg tgacgtccaa ttcctggagc catgatggag
     5701 aagccgaagc tagccggcct ggtgcccgat gccctgcggc cgcaaagcgc caagatcctg
     5761 ctcgattcgc tcgaggtcat ggcggacatc ggattccacg acttcgagat cggcgtgccc
     5821 cagcgcctgc tggtcaccgt cgaggtctgg ctcgaggatg caagcgcgcc ggccggcgac
     5881 gacccggcgc tggcgtggga ttatgatcac gtccgccggc aggtggccga gctcgccgcc
     5941 gaacgccgat tcaatctcca ggagacgctg gcggaggcca tctacctgcg gctggcggca
     6001 atgcggggag tgcgggctat ccgagtcacg acatcaaaac cggacatcta tgccaatgcc
     6061 cggggggtgg gcgtcgagtt tgcctctttc aagggcgaca gccccgactc gtgaattgcc
     6121 gttggcgatg tggaacaaaa gcgcttgcac cgcacttgaa ccggcaataa ggaggcgccc
     6181 ttactggcca tgagacttta gtacatgggc agtttcctat acctggcgac ggggctgctc
     6241 tgggggaggc ccggttcgac cgtggagttc acggcgtctc gagggagaag tgtgggttaa
     6301 tgtcttacgc ccaacgtaaa gaactgagtg gcaaccggac gatggcgatc ataatcgtcg
     6361 tcgtgatcca gtttcttctg ggttacgcga tcgttacggg acttgcttac aacgtcatca
     6421 agcaggcggc cgaggatctg aagaccttcg acgtcgagga agagccgccg ccacccgagg
     6481 aagagccgcc gccgccgccc gagaaggtcg cgcagcagcc gccgcctgtg gtcagtccgc
     6541 cgccgatcgt ccgcacgacg caggtggcgc cggtgattga aaccgtccgc gaggctccgc
     6601 cgccgataat cacgccgcgt gctccgccgg ctccgccgcc accgcccgca ccgccggcaa
     6661 aggtgacgag agcgcagggc gcaaagggca acttgcagtc ctatttcagc gctagcgatt
     6721 atccccagga tgcggctcgc agggaggaaa ctggaacgac cggcgtccgg ctgtcgatcg
     6781 gcaccgacgg gcgagtcacc aattgcaccg tcactcggtc gagcggctcg acttcgttgg
     6841 acaatgccgc atgccgaatt ctcaggagca gggctcggta cacgcctgcc aagctcagca
     6901 atggggaacc aacaacggac acggctactg gcagcatcac ctggcggctt gaatagcctg
     6961 agactcgttt aattcgtatt ttgcagagga aagtagacga atatggcaat tctccaactc
     7021 acagcagcag cggctgccgc tccggccgga gaaaatccct acggcctgtt gcccgctctc
     7081 cagcagggcg gaatcatcgc ctggtcggtg ttcgtcatcc tggtcgggat gtcgatcttc
     7141 tccttctaca tcctgttcac caagctgatg cagcagcaga agatcatcgc tcagggccgg
     7201 aaggttcggg ccagcttctg gaactcgacg aacctgcgcg aagctgccgg caagctggac
     7261 gagaagagtg cctaccgctc gatcgtcgac gacacgcttc ttgcgcagga gcagcacggc
     7321 aagctgaccg atccgatcga ccagcatgac tggatggcga acagtctggc acgcagccag
     7381 ggcgcgatcg gcgcccgtct cggcgaaggc ctcgccttcc tcgcgacggt cggttcgacc
     7441 gctccgttca tcggcctgtt cggcaccgtc atcggcatct accgcgcgct catcaagatc
     7501 ggcgcgtcgg gtcaggcctc gatcgacacg gtcgccggcc cggtcggcga agcgctgatc
     7561 atgaccgctc tcggcctggt cgtcgcggtt ccggcggtgc tcgcctacaa ctggctgatc
     7621 cgccgcaaca agtcgatcat ggaggacctc gcggccttca cgaacgatct tcacggctac
     7681 gtcatgtccg gcggttctgt ccggccgcgt ttcggtccgg aaaaagccgc aaccggttcg
     7741 cgcaccggcg cgccgacggc gaccgccggc aatccgggcg gcgctcgcca gccgctccgc
     7801 accggcgcga cccagaccgg cgccgaaacg ccgacttcgt aactcgacgt gaaaggccgg
     7861 gccgttttcg cggcggcccg gccttcgaac agccagtaga atgaaggcac gatcgccatg
     7921 gcagtaaatg taggtccctc cgaaggcgaa gaagaagcca tgtcggacat caacgtcgtc
     7981 cctctcgtcg acgtgatgct ggtgatgttg atcatcttcc tgatcaccgt tccggtcgtc
     8041 cttcagacgg ttccggtgac gctgcccagc gtccgatacg aaccgacgac gaccaagccc
     8101 gagaacgtca acctgtcggt caagggtgac ggaagcggcg gttgcgaggt ctactggaac
     8161 ctgaccaagg tcaacagcga ggagctcctc gacaaagctg tgaagaagct cgaggagcag
     8221 atcgccaagg taggcggtgc cgaaaacctg accgaagaca caatgccgga ggcgcacatc
     8281 cgcggcgacg tggacacgcc gtacaaatgt atcggcggtg cggtcttcac catgcagcgc
     8341 gctggcttcg cgcggatcgg attcatttcc gagccggcgc cgaacactgc cgcgaactaa
     8401 ttaggagcgc ttctcgatgg caatgcagac gaccagtgac aacccgcaag gggagccgat
     8461 gctggacatc aacatgacgc cgctgatcga cgtgctcctg gtgctgctga tcatgttcat
     8521 catcacgctt ccggtgcaga ctcacgcggt gaagctggat cttcctcagg actcgcagaa
     8581 caacccgccg ccgatccttc cgaccaagaa caagatcgtg atcacggccg acaaccagat
     8641 cctgtggaac gggacgccgg tcaatccgga gcagctccgg ctctacctcg acgcgaccca
     8701 gcagatcgat ccgcttcccg agcttcacct ccagccggag ccgaacgcga aatatgcact
     8761 agtcgatgaa gtgctcgcta tcaccaagcg cgcgcacgtc gaaaagatgg gtttcgtcgg
     8821 caacgaagct tacgcgaatt tctaaaagcg gggtttggtc ttcgcttcct ctgcaagggc
     8881 ggcccaacgg ccgccctttt cgcttcctcc gccactggcg ctcgccggta gcccgtgcca
     8941 ttcacattcg ccgagatgac cagagtgcct gatttcgccg tcgtcgtact tgccgcgggc
     9001 cagggaacgc gaatgcgttc cgacacccac aaggtgcttc acccgatcgc ttcgcggcct
     9061 cttctccttc acctgctcga ttgcatcgac ggcatcggcg cgtcgaagcg ggtcgtcgtg
     9121 gtgggaaagg gcagggacca ggtcgagcgc accttgaatg gcagcgacgt cgcaatagtg
     9181 catcaggcgg agcaaaaggg gaccggccac gctgtcctcc aggcgaaggc ggccctcgac
     9241 ggctacgagg gtgctgtcct cgtgctttat gccgatacgc cattcgtcca gcctgcaacg
     9301 ctggagcgga tgctcgagcg cctggatggc gatgatggcc cgggcatcgt tgtcctggcc
     9361 tcgcaacccg cggaccccgc cgcctatggc cggatcatcc tcggcgaggg cgatcgcatc
     9421 gccaaaatgg tcgaattcag ggacgcgact ccggaagagc gcgctgttcg cctgtgcaat
     9481 tcgggaatga tggcggtccg cgcgcgcgac ctgttcgact ggcttggcaa ggtcgggaac
     9541 gacaatgccg cgggcgaata ttacctcccc gacatcgtca acattgccgc ggccgagggc
     9601 cgcgaggcgg ttgtcatcga aggcggagct tacgagacgg cgggcgtcaa cagccgggcc
     9661 gagctcgccc atctcgaact ggaatggcag cgccgcaggc gcgagcaggt gttgcaggaa
     9721 ggcgcgaccc tgatcgaccc ggaaagcgtg tggttcgctt acgacacgaa actcggccgc
     9781 gacgtcacgg tcgaaccgca tgtcgtgttc ggccccgggg tcgaggtcgc cgacggagcg
     9841 acgatcaagg cgttcagcca tatcgagggg gcagtgatcg gcgcccgagc cgcgatcggg
     9901 ccatttgccc ggatccgtcc aggcaccttg ctggccgacg ggtctaaggt cggcaatttc
     9961 gtcgagttga aaaaggcgac cgttgcgcgt ggagccaagg tcaaccacct ctcctatgtc
    10021 ggcgattcgc aagtcggaga gaatgcgaac atcggcgccg ggacgatcac ctgcaattac
    10081 gacgggttcg ggaagtaccg gacgatcatt ggtgccggcg ccttcatcgg ctccaatacg
    10141 tctctggtcg cgccggtgac gatcggcgaa ggtgccgtag tcggcgccgg gtccgtcatc
    10201 acgagcgatg tcgagcccga cagcctggcg gtcgagcgaa gcgagcagaa gggcatcgcc
    10261 ggatgggccc gccgcttccg cgagcggatg agccggaagg ctgccgagta gatgtgcgga
    10321 atcgttggaa ttgtcgggaa ggctgaggtc gccacgcgcc tcttcgacgg cctcaagcgc
    10381 ctcgaatatc gcggctatga ctcggccggc atctgcacga tcgaggacgg cgcgttcgaa
    10441 cggcgccggg ccgaggggaa gcttgagaac ctgaagcgcg cgctcggttc cgaccctctg
    10501 ggcggactgg tcggaatcgc gcatacgcgc tgggcgacgc acggcgctcc gacagtaggc
    10561 aacgcgcacc cgcacatcgt cggccccgtc gcgctcgttc acaacgggat catcgagaat
    10621 ttcaagccgc tccgtgacga gctgatcgcg caggggcgca agttcgaaag cgagacggac
    10681 acagaggtcg tcggccacct ggtcgctcgc gagatcgaac aggggcaatc accgaacgag
    10741 gcggtagcag cggtgcttcc gcgcttgcag ggcgccttcg cgatcgcctt cctgttccgc
    10801 gacgatcccg acctgatcat cggcgcgcgg atgggggcgc cgctcaccgt cggctatggc
    10861 gagggtgaaa attatctcgg ttcggacgca atcgccgtcg cgccctggac tcagcggatt
    10921 gcctacctgg aagaaggtga ctgggccgtc gtccgccggg acaggatcga gattttcgac
    10981 cgggacaatg cgcccgtcga gcgggagatc gtcgaatccg gggcctcgtc cgcgcccgtc
    11041 gagaaaggca attaccgcca ctacatgcaa aaggagattt tcgagcagcc cgtcgtggtt
    11101 gcccagactc tccagagcta tctgcgcccg ttcgagggcg aagtggcgct tcccaacgtc
    11161 gatttcgacc ttggcgccat cgaccggctg accatcgtcg cctgcgggac gagctattat
    11221 gcggggctcg tcgccaagta ctggatcgag cagttcgcgc gggtccccgt cgacatcgat
    11281 gtcgcttccg agttccggta ccgcgacccc gtcctcgagc ctggcggact ggccctcttc
    11341 gtcagccagt cgggagagac tgcggacacc ctcgccgccc ttcgccacgc gaaggatcag
    11401 gagcagcgga tcgcggtcgt ggtcaacgtt ccgaccagct cgatggcgcg cgaggccgat
    11461 ctgctgctcc cgacccacgc cggtcccgaa atcggcgtcg cctcgaccaa ggccttcact
    11521 tgccagctcg ccgtcctcgc cgcgctcgcc gccaacctcg catgctcacg cgggcggatc
    11581 ggccgagacg aggagaagaa catcgtcgcc cacctccacg aggcgccggc ggcgcttaat
    11641 gccgcgctca accacgatga cgacatcgcc gcgatggcgc acttgatcgc gccggcccgc
    11701 gacgtgctct acctcggccg cgggccttat tatccgatgg cgctggaagg agcgctgaag
    11761 ctcaaggaaa tcagctacat ccatgccgaa ggctatgcag cgggcgagat gaagcacggc
    11821 ccgatcgcgc tgatcgacga ggacgtgccg gtgattgtcc tcgccccgtc cggaccgctg
    11881 ttcgaaaaga ccgtcagcaa catgcaggaa gtgcgcgcgc gaggcggcaa gatcgtgctg
    11941 atcagcgatt ccaagggaat cgacgaggcc ggcgacggct gcatcgcaac gatcgagatg
    12001 cccgaggtcc acccgctcat cgcgccgatc gtctacgcgg ttccggtcca gctgctcgcc
    12061 tatcacacgg cggtcctgaa aggcaccgac gtcgaccagc cgcgcaacct ggcgaagagc
    12121 gtgacagtgg agtgatcagg cggccttctt cgccttcaac atgcggacgt ggcggctgag
    12181 ttcgtcgtag aggaaatcga tcaccgcgcg gactcgcggc gtgtggcgga cccgctcgtg
    12241 cgtgaacagc cagaggattc gtccatgctt cgggcgcggc ggcaagcaac ggacgaggtc
    12301 cagctcggcg tcggcgctga tgcaagggag aaccgccact ccgaagccgg agcgaacacc
    12361 ggacagtaat ccgcccgaag tggcgtggtg catcgcgacc tgttgctcga gtcccagctc
    12421 cttcaaccac gcctggtagt gaagccacag attgcctccg ccgcctccga tgaacgcgtg
    12481 ccttttcaac tcccgcaccg tcgaaggcac gccatggcgc gccgcatagt cgcggctgca
    12541 gtaaagtgcc cagtcgtcga cacacagctg tcggccaacg aggcccgccg gctgcttttt
    12601 attggccgtg ctcctcagcg agatatcggc atctccggca ccgagatccc ggacggtctg
    12661 gctggtatcg agatcgatga cgatatcggg gtggatctcc cgcagctggg tcagaagcgg
    12721 cgcgagcagc gtaatcgcgt agatttcctc ggtcgtaatt cggacggttc cgctcaaatc
    12781 ccgcgcgttg gccgacgccg cctggccgaa tttggcaacc gaaatttcga cctgctccgc
    12841 cttcccgacc agttcctctc ccgcgggagt gagcgcatag ccggcttgcc gcttctcgaa
    12901 gagggggaaa ccaagcgccg cctccagcgc cgcgattcgc ctggcaaccg tcgtctggct
    12961 gactcgcatc tgacgcgcag ccgcaagcgt gctgccctcc ctagccaccg caagaaaaaa
    13021 gcgaaggtca ttccagtcca tcggcattga tcctagccgc gtcctgcggc gccaccgttc
    13081 tgcaattctg cagaatgata gcacgacatc gttgctgccc cgcagcgaaa tttgggacta
    13141 tctggtcggt cgcactcgaa caggaggaat gcgaccatga aacagactct caagatcatc
    13201 gccgtcagcg cgctcgcgac ggccgctctc atcaaggcgg ttccggcgct gtccgagccc
    13261 gttccggccg agctgaatgt cagcgtcgtt cgcactggcg acctgaacct ctcgaccggc
    13321 gagggccagc ggcgcctgca gcagcggctt gtcaccgccg ctcacgcagt gtgcgacggc
    13381 gcgtcagcgg ccgacctcag ggcgcagaat gccgagcggc agtgccgcga tgaggttctc
    13441 gccgccgccc gttcccgggt cggagaaatt gtcgcagaca agaagggcgg cagcatcatt
    13501 cttgcagcga acaagtagcc aatgggtgtc ggcggtcgtt tcgccggcga cacttgttct
    13561 cgaaaatggt ggcaatctca atggcttcct gtatcctgtc cgcggggtgg aggtttccat
    13621 gggttgtcac cagccgctgg ccgccagcag catcgacagc gaacgaaatt acgtttccga
    13681 ctattggaac gacggctatg cggtgatccg cgggctgttc tcacgcgacg aagtggcggc
    13741 aatcgccgcc gccgccgacc agatccacga cgaaggcgtt aggcacggcc gaagcttccg
    13801 ccatggcaat ctcttttaca acgtcgcggc gggagcagcg ggcgaaccgc tggttcggat
    13861 ggtccagtgg ccgtcatacc accagccggt cctgaactcg gttcggctgg actcgcggat
    13921 tgccgcgctt ctcgatccat tgctcggggg agatctcaag cagatcatca accagcttca
    13981 ctggaaagcg ccgggctcgc tcggcgattt cgcctggcac caggacagcc ggtcgcgccg
    14041 ccccgcctgg gcctaccgca acctcgccga ttcctacgtc cagaccggcc tcgccatcga
    14101 tccgcacggc cccgagtgcg gcggtttgcg attcattccg gggagccatt tgcagggcga
    14161 tctcgggatg gattgctcga agaaggcgct cgggactccg ctgcaagacc aggcgctgga
    14221 ggaggtcggg cttcgctcgg aagacgccgt cgacctcgtg ctccagccgg gcgacctggc
    14281 gctgtggagc ccgtacctgg tgcacggctc gggcgaaaac cgatcgagcc acatgcgccg
    14341 tttctacatc aacggctatg tccgcgcgca ggactgcgac cgcggcgaat gggcgttccg
    14401 gaagggcgag cccgtggcct taggacctga acccgctctc gttcattacg aagagcttcg
    14461 cgaacggccc gaaccgcatt acgtctgagg ccatgaaggc ttcaggcggg tgtcactgcg
    14521 gttcggttcg gttcgaggcg gagctgggcg aaccgccggt cccggccctg gattgcaatt
    14581 gctccgtttg ccggatgact ggattcctcc acatcgttgt tccgcatgag cgcttcgagc
    14641 tcgtcaccgg ccgcgactcc cttgccagct atcgctttgg cacgggcgcc gccgagcatt
    14701 tgttctgcgc gctgtgcggt gtgaagagct tttatcagcc gcgctcccat cccgattcct
    14761 ggagcgtgaa cgccaattgc ctcgatgagc cggtcgagct tgcgatcgag cagttcgacg
    14821 gccgcaactg gaacgaggcc aaggcgcgcc tcgacgcggg cacgggcggc ggctagtcgg
    14881 cccgcatgca ccgaccgctt cgcct
//
LOCUS       DATAKH010000110        10769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_17585,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000110 DATAKH010000000
VERSION     DATAKH010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 10769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10769
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17585"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VHN55_04610"
     CDS             complement(<1..388)
                     /locus_tag="VHN55_04610"
                     /inference="COORDINATES: protein motif:HMM:NF039614.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase-related protein"
                     /protein_id="HEX2803248.1"
                     /translation="METQSASAVLLVRPAAFGFNDEAAESNVFAHASADPQFAARALS
                     EFEMLADRLAGAGVEVAVLDDTPSPAKPDALFPNNWLSFHCDGTMVLYPMATAPRRLE
                     RRATEVGELLEGRGFEVRRIVELSGYE"
     gene            587..1303
                     /locus_tag="VHN55_04615"
     CDS             587..1303
                     /locus_tag="VHN55_04615"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047689 - aspartate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HEX2803249.1"
                     /translation="MRKLGIVGGTSWASTALYYEHINRGVAKRLGGLHSARIAIESLD
                     LAPVAELELSGDWDGVAAIVTDAAKRLVKSGCDGLLIASNTGHKVYNAAAAAVRPPVL
                     HIGDATAEALLADDRKRVALLGTRFTMTEPHVRSRLESRGITLVPVDDKSMAEVDRII
                     FEELAAGRVVRDSQRTLKTLIAALARQKVHAVVLGCTELVLAVDSRANVVPVYDTTAI
                     HARAAVEWMLAEEEQAKAAA"
     gene            1364..2848
                     /locus_tag="VHN55_04620"
     CDS             1364..2848
                     /locus_tag="VHN55_04620"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2803250.1"
                     /translation="MNQKKLAFATVLACLALPAGAQHSHGTSAAQQSPKSSDPYKYGL
                     FQLHNFEYASAAEAFRKAQQADPANVMAYWGEAMTYNHPLWDEQDRDAALAVLARLGA
                     TPEIRAAKARDSREKAWLGAVEALYGDGTKPQRDLAYLARMQEILASDPGDVDARAFT
                     GLATLGSSHGGRQIPTYMQAAAILEEGYITHPRHPGILHYLIHSYDDSVHAPLGLRMA
                     RSYAVIAPDAGHAQHMVSHIYNGLGMWADSERANTLATAVTNRERAAKNQGPHYCGHY
                     NEWLVYARLQQEKDARPVIDGCRAQAEAELAGFKASGKKGFPSAASSYGDMALRYGIE
                     TGTWLEPLDFSLPFYVKTRFDFANARMLASRGNAAQSAAALAALRTEAAGTIAQIQQM
                     SAGTDEITPWIKAAVAQGEAIAALSGGDPESGLRMLRAAAAAEMDLPPVFGPPAIRKP
                     SYELLGDVLLELGRKEEAAAAFRKALAFAPGRRLSLEGLEKSAQ"
     gene            2887..4827
                     /gene="uvrC"
                     /locus_tag="VHN55_04625"
     CDS             2887..4827
                     /gene="uvrC"
                     /locus_tag="VHN55_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEX2803251.1"
                     /translation="MSKADRPDHPRAAERFNEEQATYAVRGADKPDLEAGVAAIREVL
                     RTLPRRPGVYRMQDARGDVLYVGKARVLKNRVTSYTQVAKLPKRLQRMVSQTRSLTIV
                     TTRTEAEALLLEAQLIKRFRPAYNVLLRDDKSFPFILLREDHPFPRVQKHRGARRAKG
                     QYFGPFASAGSVTRTLNALQKLFLLRSCSDSFFETRSRPCLLYQIRRCSAPCVGRISE
                     SDYAELVKDAKAFLAGRSTGVQERLGRQMAEAAEKQDYELAAVYRDRLRALTYIQGSQ
                     TVHSEGLGDADVFALACKAGAMCIQAFFIRGGQNWGHRAFFPAHTADIPEAEVLSAFL
                     MQFYEEVPPPRRILLDRAIGDRELLEEALCERRGGKVAIEQPKRGSRAKLVEQARRNA
                     EEALERRRAETASQTKVLRELTDTFELAELPKRIEVYDNSHIMGTNATGAMIVAGPEG
                     FRKNNYRKFNIKRPETRPGDDFAMMREVLERRFARLEREDPERSSGNWPDLLLIDGGK
                     GQLSAVCDVMEDMGVHDVPIVAVSKGPDRNAGRETFHLPGGRELTLPPNSALLFYLQR
                     LRDEAHRFAIGTHRQKRSKNFTTSTLDEVPGIGPSRKRALLMHFGTARAVKGAALEDL
                     ERAPGISKAIARQVYDHFHPRG"
     gene            4830..5420
                     /locus_tag="VHN55_04630"
     CDS             4830..5420
                     /locus_tag="VHN55_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010183896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein O N-terminal
                     domain-containing protein"
                     /protein_id="HEX2803252.1"
                     /translation="MQFETEAIVCAVLHHGEHGAIVRMLTPDHGLFAAYVRGGRGRRM
                     RPVLIPGNVVAVQVRSRTESQLPQASIELSRSRGPILGEPLPSSAIEWATALVASALP
                     ERQPYPHIHAALSGLLDAVESAPSASGWGRGLARFESLLIAELGYGSGEVDSTDLFEA
                     LRSSGDRLFRDVLPGSAPSLRDSRGRLVERMRRALV"
     gene            5450..5857
                     /gene="apaG"
                     /locus_tag="VHN55_04635"
     CDS             5450..5857
                     /gene="apaG"
                     /locus_tag="VHN55_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HEX2803253.1"
                     /translation="MVSSDVLSVLFPKLAVTRDISVRVAVSYLAEQSNPALNRWFWSY
                     HIRIENGSAVSVQLLSRSWRIVDGRGTAHEVHGEGVVGETPLIAPGGSFDYVSGCPLD
                     TPSGEMSGTYRMVDEAGDVFDVDIPHFALVAPS"
     gene            6175..6465
                     /locus_tag="VHN55_04640"
     CDS             6175..6465
                     /locus_tag="VHN55_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803254.1"
                     /translation="MDFAAAAAAAAVLAQRAVREEELPSALRETSGSSVALVTVGAAY
                     TAWLETIAAKPVAKIAVRILDVIDLPRSADMALNRSRMDVTPHQAIGCACFF"
     gene            6613..7011
                     /locus_tag="VHN55_04645"
     CDS             6613..7011
                     /locus_tag="VHN55_04645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803255.1"
                     /translation="MAKSLLLRAALLGAGVSLPIAAVSAQPVWTPGSEIAGQTVQVQT
                     NGVMNSVYFSPDGTVSITTPDGTTVPGTWSTANNMLCVSASGGQECWPYSQPFQAGRQ
                     VALTSSCQQVSTFMPQSTNPPVQQGAGERG"
     gene            complement(7069..7545)
                     /locus_tag="VHN55_04650"
     CDS             complement(7069..7545)
                     /locus_tag="VHN55_04650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803256.1"
                     /translation="MALSQIVFCVLSILVAKATVLEKREWRMTWAIRSCALAAGAAAL
                     LSTQAVYAAPVSSHSTGVDPLVSLSVLGTSQSRGAVCSGATFGAKAAASTACGIPVTA
                     AAAAAAAAAAQDYPNDPKPIGVLPLIIGLVVIGGLIALILSSGGDSQGNLTPVSPD"
     gene            7968..8753
                     /locus_tag="VHN55_04655"
     CDS             7968..8753
                     /locus_tag="VHN55_04655"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX2803257.1"
                     /translation="MIRTKFLSRKNRIAGPRGRRAFAIGDVHGCLDLLEDLLARIQAE
                     IDENPKPKTSIIFLGDIIDRGPASAQVVERLRTYSPRGASAHFVMGNHEEVMLRVLEG
                     ETDMLASWLRFGGAETLRSYGLEPREIAKLPDEEMLSRLRGAIPARHVQFLNSFADSI
                     SFGDYLFVHAGIRPGVEISEQSQSDLRWIRAPFLEDSTDHGFIVVHGHTITNEVDVAP
                     NRIGIDTGAFCTGTLTALAIEGPRRWFIQTPAGQPARSSSISA"
     gene            8890..9543
                     /locus_tag="VHN55_04660"
     CDS             8890..9543
                     /locus_tag="VHN55_04660"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX2803258.1"
                     /translation="MAIGGCTDRRGGSIPYNVSDFGAPDPLSSLALPKDYKIAPMDTL
                     SIRVFGMPDLTGEYQVDLLGNVAMPLVGDVSALDKSPVEFDQALTRKYSEKYLENPDI
                     SVAVKSSNGRLVTVDGAVRKGGAFPVIGRMTLMQAIALAGGADPKLANMRRVAIFRTI
                     DGKRQAAAFDLLSIQRGEMDDPSIYSGDIVIVDGSNLKEMQENLLRTIPLFNIFRPF"
     gene            9676..>10769
                     /locus_tag="VHN55_04665"
     CDS             9676..>10769
                     /locus_tag="VHN55_04665"
                     /inference="COORDINATES: protein motif:HMM:NF039586.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX2803259.1"
                     /translation="MDAPAAESDLTPAKTSWLERERLNGRLYRYAEAGAAIAFLVAAG
                     ASFLLLRQEPQSAALLSPPLVAMLLVANLIPAIALMVLFSRRIAMRRAERGGLGTGRL
                     HTRLVALFSVIAAVPTVLVAIFASVLFQSGLDFWFSDRARGLLENTTEVAQSTYRFEF
                     SRVGVEATTMAGDLATYVGEFPLDDPKFQEGVAYQTYRRSLNEAAVLTVGDDGNVRTL
                     ALVNAYEGMIVPDKIKVAALELNAGEVAGIEAPNRIALLTPIPVDESTYLYVARYIDP
                     EIASQIARANRVLADYHALVKGSWLNQLRFNAALLFGSLIIVALAIFAALRLADRLVR
                     PVGQLADAAGRIEEGDFSARVPITNTEDEIA"
BASE COUNT         2020 a         3378 c         3408 g         1963 t
ORIGIN      
        1 cctcgtagcc gctcagctcg acgattcggc gcacttcgaa cccgcgtcct tcaagcagct
       61 cgcctacctc ggtggccctt cgttccagcc gtcgcggcgc cgtcgccatc ggatacagaa
      121 ccatggtgcc gtcgcagtgg aaagagagcc agttgttcgg gaacagcgcg tcgggcttgg
      181 caggcgaggg cgtatcgtcg agcactgcga cctcgacccc ggcgccggcc agccggtccg
      241 caagcatttc gaattccgac agcgcccggg ccgcgaactg cggatcggct gaggcatggg
      301 cgaacacgtt cgattccgcc gcctcgtcgt tgaaaccgaa tgcggcgggg cggaccagca
      361 ggactgcgct tgcggattga gtttccaccg cgacgctttc ccgcgccggc tgaatgacgt
      421 caatccgccc acaattttcc gcagtggggc cgcttgcccg caaaagcgaa ttggccgaag
      481 gttcggcggc gctgagtcga ttgctggctc agcgttgaaa aaatgcatct gggttcaagc
      541 ccccagccgg tcgcccggtt ggggtgttgc cggaggggag gctgaattgc gcaaactcgg
      601 aatcgtgggc ggcaccagct gggcctctac agctctttac tatgagcata tcaaccgcgg
      661 cgtcgcaaag cgcctcggcg gactgcacag tgctcggatc gcaatcgaaa gcctcgacct
      721 cgcgccggtc gccgaattgg agctctcggg cgactgggat ggcgttgcgg caatcgtcac
      781 cgacgcagcg aaaaggctgg tcaagtcggg ctgcgacggt ttgctgattg cgtccaacac
      841 cggccacaag gtctacaatg ccgccgccgc cgcggttcgg ccgcctgtcc tccatatcgg
      901 cgacgccacg gccgaggcgc tgctggccga cgaccgcaag cgggtcgcat tgctcggcac
      961 gcgtttcacg atgaccgagc ctcacgtccg ctcccgcctc gaatcgcgcg ggatcaccct
     1021 cgttccagtc gacgataaat cgatggccga ggtcgaccgg atcatcttcg aggaattggc
     1081 ggccggcagg gtcgtccggg acagccagcg cacgctcaaa acactgatcg cggcccttgc
     1141 ccggcagaag gtgcacgcgg tcgtgctcgg ctgcacggag cttgtgcttg ccgtagattc
     1201 cagggcgaat gtcgtgccgg tctacgatac gactgcgatt cacgcccgcg cggcggtcga
     1261 atggatgctc gcagaggagg aacaggcgaa ggccgcggcc tgatttgccg atggcgggcc
     1321 gttccgccta agctcgctcc ggtcgtcgaa cgggggtgag atgatgaatc aaaagaaatt
     1381 ggcgttcgcg acagtgctgg cttgcctggc gctgcctgct ggtgctcagc attcccacgg
     1441 cacgagcgcc gctcaacagt cgccaaaatc ctccgatccg tataaatacg gcctctttca
     1501 gcttcacaac ttcgaatatg cttcggctgc cgaagccttt cgcaaggcgc agcaggcaga
     1561 ccccgccaac gtcatggctt actggggcga ggcgatgacc tacaaccatc cgttgtggga
     1621 cgagcaggac cgcgatgcgg ctctggccgt gcttgccagg ctcggcgcta ctcctgaaat
     1681 ccgggcggcc aaggcgcgcg actcacgcga aaaggcctgg cttggcgcgg tcgaggctct
     1741 ttatggcgac ggcaccaagc cgcaacggga tctcgcctat ctcgccagga tgcaggaaat
     1801 cctggcgagc gacccgggcg acgtggatgc cagagctttc accggtcttg cgactctcgg
     1861 ctcttcgcat ggcgggcggc aaattccgac ctacatgcag gcggcggcga tcctcgagga
     1921 ggggtatatc acccatcctc gccatcccgg catcctccat tacctcattc acagctacga
     1981 cgattccgtc cacgcgccat tgggccttcg gatggcgcga tcctatgcgg tgatcgcgcc
     2041 cgatgccgga cacgcccagc atatggtcag ccacatctac aacggcctgg ggatgtgggc
     2101 ggatagcgag cgcgccaaca cgctcgcgac tgcggttacc aaccgcgaac gggcagcgaa
     2161 gaaccaaggc ccgcactatt gcggccacta taacgaatgg ctcgtctacg cccgccttca
     2221 gcaggaaaaa gacgcccggc cagtcatcga cggatgccgc gcgcaggccg aagccgaatt
     2281 ggccgggttc aaggcgagcg ggaagaaagg atttccgagc gctgcgtcca gctatgggga
     2341 catggcactg cgctacggaa tcgaaaccgg aacttggctt gagccgctgg atttttcgct
     2401 gcccttttac gtcaagacgc gcttcgactt cgccaatgcc cggatgctgg cgtcgcgggg
     2461 caatgcggcg caatctgcag ctgctctcgc tgcgctcagg accgaggcag caggtacaat
     2521 cgcccagatt caacagatgt ccgctggaac tgacgagatc acaccctgga taaaagctgc
     2581 agtggcccag ggcgaagcga tagctgccct gtcgggcggc gatccggagt ccgggttgcg
     2641 catgttgcgc gccgcggcgg cggccgagat ggacttgccc ccggtgttcg ggccgcccgc
     2701 gatccgaaag ccgagctacg agcttctcgg cgacgtcttg ctcgaacttg gtcgcaagga
     2761 ggaagcggcg gctgccttcc gaaaggccct cgcgttcgca ccgggccggc gcctttccct
     2821 cgaagggttg gagaaatcgg cgcaatagcg ctcgtcactt cggcgctgcg acactagatc
     2881 gagggcgtga gcaaggccga ccgtcccgac catccgcgag ccgccgagcg cttcaacgaa
     2941 gagcaggcta cttacgccgt gcgcggcgcc gacaagcctg atctcgaagc aggcgttgcg
     3001 gcgatccgcg aggtcctgag gactcttccg cggcgtcccg gcgtgtatcg aatgcaggat
     3061 gcccgaggcg acgtgctcta cgtcggcaag gcgcgggtgc tgaagaaccg ggtcaccagc
     3121 tatacccagg tggcgaagct tccgaagcgg cttcagcgga tggtttcgca gacccgctcg
     3181 ctgacgatcg tcaccaccag gaccgaggcg gaggccctgc tgctcgaggc gcagctcatc
     3241 aagcgcttcc ggccggctta caatgtgctc cttcgagacg acaaaagctt cccgttcatc
     3301 ctgctccgcg aggaccaccc gttcccccga gtccagaaac acaggggcgc gcggcgcgcg
     3361 aaggggcaat atttcgggcc gttcgcgagc gccggctcgg ttaccagaac acttaacgcc
     3421 cttcagaagc tcttccttct aagaagctgt tctgacagct ttttcgaaac ccgttcgcgg
     3481 ccctgcctgc tctatcagat tcgccgctgc tcggctccgt gcgtcggccg gatcagcgaa
     3541 tccgattatg ccgagctggt gaaggacgcg aaggccttcc tcgccggccg ctcgaccggc
     3601 gtccaggaac gcctcggccg gcaaatggcg gaagcggccg agaagcagga ctatgagctt
     3661 gccgcggtct atcgcgaccg gctccgcgcg ctcacctata tccaggggtc gcagaccgtc
     3721 cattccgaag gccttggcga tgccgacgtc ttcgcgctgg cgtgcaaggc gggcgccatg
     3781 tgcatccagg cctttttcat cagggggggg cagaattggg gacatcgtgc ctttttcccg
     3841 gcgcacaccg ccgacatacc tgaagccgag gtcctgtcgg cgttcctgat gcaattctac
     3901 gaggaggttc cgcctcccag gcggattctg ctcgaccgcg cgataggtga ccgggagctt
     3961 ctcgaagagg cgctttgtga aaggcgaggg ggaaaggttg cgatcgagca gccgaagcgc
     4021 ggctcgaggg caaagctcgt ggagcaggcc cggcgcaacg ccgaggaagc gctggaacgg
     4081 cgtcgggcag agaccgccag ccagacgaag gtgcttcgcg agctgactga cacgttcgaa
     4141 ctcgccgaat tgccaaagcg gatcgaggtc tatgacaata gccacatcat ggggacgaac
     4201 gcgaccggcg cgatgatcgt cgcggggccg gaaggcttcc ggaagaacaa ttatcgcaag
     4261 ttcaacatca agcgccccga gacccgcccc ggcgacgatt tcgcgatgat gcgggaggtg
     4321 ctcgagcggc gcttcgcccg gctggaacgg gaggatccgg agcgaagcag cggcaactgg
     4381 cccgacctgt tgctcatcga cgggggcaag ggacagctgt cagcggtgtg tgacgtcatg
     4441 gaggacatgg gcgtccacga cgtccccatc gtcgcggtgt cgaaggggcc cgaccgcaat
     4501 gccgggcgcg aaaccttcca cctccccggc ggccgcgagc taactctccc gcccaactcg
     4561 gcattgctct tctaccttca gcggctgcgc gacgaagccc accgattcgc catcggcacg
     4621 catcgccaga aacggtcgaa gaactttacc acgtcgacgc tcgacgaggt cccggggatc
     4681 ggcccgagca gaaagcgggc gttgctgatg cacttcggca cggcgcgggc ggttaagggc
     4741 gcagcgctgg aggatctcga gcgggcaccg ggaatatcga aagcgatcgc ccgccaggtc
     4801 tacgaccatt tccatccgcg cggctgacga tgcagttcga aaccgaggcg attgtctgcg
     4861 cagttctcca ccacggcgaa catggcgcca tcgttcggat gctgacgcct gaccatgggc
     4921 tcttcgctgc ctacgtccgc ggcggtcgcg gcaggcggat gcgcccggtg cttatcccgg
     4981 gcaatgttgt cgcggtccag gttcgatcgc gaacggaaag ccagcttccg caagcttcga
     5041 tcgaattgtc gcgcagtcgc ggaccgattc ttggcgagcc cttgccgtcg agtgcgatcg
     5101 aatgggcaac ggccctggtc gcctcggcgc ttcccgagcg acagccctat ccgcacattc
     5161 acgccgcact gtcggggctt ctcgatgccg ttgagtccgc cccttcggca agcgggtggg
     5221 gaagggggct ggcgcgcttc gaatccctgc tgatcgccga acttggctac ggcagcggcg
     5281 aagtggattc gactgacctg ttcgaagcgt tgcggtcgtc gggtgaccgg ctcttccgcg
     5341 acgtgcttcc cggatcggca ccgtcgcttc gcgacagccg cggccggctt gtcgagcgga
     5401 tgcgaagggc gcttgtctga ctgagcggcg cctcctagtc tcgcaggcga tggtttcgtc
     5461 cgacgtgctc tcggtactgt tccccaaact cgcagtcact cgcgacatca gcgtcagggt
     5521 tgcggtcagc tatcttgcgg aacagtcgaa cccggcattg aaccgctggt tctggtcgta
     5581 ccatatccga atcgagaacg gctcggccgt gtcggtccag ctgttgtcgc gcagctggcg
     5641 gatcgtcgac ggccgtggaa ctgcgcacga ggtccatggc gaaggcgtag tgggcgaaac
     5701 gccattgatc gcaccgggcg gcagcttcga ttatgtttcc ggctgccccc tcgacacccc
     5761 aagcggagaa atgagcggga cctatcggat ggtcgacgag gcgggcgatg tcttcgacgt
     5821 cgacattccg catttcgcgc tggtcgcgcc gagctgatcg aaccgcggcg gccaaaaatg
     5881 aaaagggcgg cgctggggcc gccctagtca tccgacaggt tcagcgatca cgccggagtg
     5941 acggggacca gcactccatc gtcgtcatcg tcattgagca ggagaagtgc tgcaaggccc
     6001 gcaatggccg cgagcccgag caggagcggc agcatgccga tcgacttccc ggtttctgcg
     6061 gtagtcacga ccggcggtgc gacctcggtc acgaccgggg gcggcgtcgt tacgaccgga
     6121 aacaagcatc ccggcgccgg cgcttgagcg gcggccgccg ctgcggtcgt cgtcatggac
     6181 tttgccgcgg ctgcagcggc agcagccgta cttgcgcaaa gggcggttcg cgaggaggag
     6241 cttccaagcg cgctcagaga aaccagcgga tcgagcgttg ccctggtaac agtgggcgca
     6301 gcatacacag cctggctgga aaccattgcg gccaaaccag tagctaaaat tgccgttcgg
     6361 atcttggacg tcatcgatct tccccgttct gcggatatgg cactaaatcg ctccagaatg
     6421 gatgtaacgc cgcatcaggc aatcggttgc gcctgttttt tttgacgggc ggaagttgcg
     6481 gttttccgcg cttccccatt cgccgtttct ctcggtcacg gcggcattca tcggaaaagc
     6541 ttcaagtcgg tggaaaccat gtccgcgatg aattgttgtc gagtctctag ccagccggaa
     6601 ggagtgcacg cgatggccaa atcactgctg ttgagagctg cgttattggg ggcgggagtc
     6661 agcttgccga tcgctgccgt ttccgcacag ccagtctgga ctcccggatc cgagatcgcc
     6721 ggacagacgg tgcaggttca gacgaacggc gtaatgaaca gcgtctattt ctcgcccgac
     6781 ggaacggttt cgatcaccac gcccgacgga acgacggttc cggggacatg gtcgacagca
     6841 aacaacatgc tgtgcgtgag cgccagcggt ggccaggaat gctggccata ttcgcagcca
     6901 ttccaggccg gccggcaagt cgcgctgact agctcgtgcc agcaagtctc gaccttcatg
     6961 ccacaatcga ccaacccgcc agtgcagcag ggcgccggcg agcgcggcta acgcgcaaag
     7021 aaaaagggcg gccgcgaggc cgccctttta ttatggctgg tatgcgactt agtccgggct
     7081 aaccggagta aggttgccct gcgaatcccc gccgctcgag agaatgagag cgatgagccc
     7141 gccgataacg accaggccga ttatcagcgg caggacgccg atcggcttcg gatcgttcgg
     7201 ataatcctga gccgcggcag ccgcagcggc cgcagcagcg gcagtcacgg gaatcccgca
     7261 cgccgtgctt gcagcggctt tcgcgccgaa ggtcgcgccc gagcaaaccg cccctcgcga
     7321 ctggctcgtg ccgagcacgc tcagtgaaac aagcggatca acgcccgtcg agtgactcga
     7381 cacaggagcc gcataaacag cttgggtcga gagtaaagca gctgcccctg cagccagtgc
     7441 acaactacgg atcgcccacg tcattcgcca ctcccgtttt tccagaacgg tggcttttgc
     7501 caccaaaatg gagagaacgc aaaacacaat ttgcgataac gccaaaattg attgattccg
     7561 gcagcgccga acggctgtaa tcgcagctca ctatttgccc cggcgccgat aacggactta
     7621 ggcaagccgg cctgcggcct tttatcgtct aaggctaagt ggttttattt gccgggtatt
     7681 ttggttcgca ggagaatggc gcttgcaacg tgccggatat ggcggctttg ggtgaatgcg
     7741 cttcacgacg ccaagctcag ccgcgtcgcc agagtagcgc ggcggacgtt ccgatggtcg
     7801 ggatttgcgc cggcgcggcg aggttagaag tgaatctgtt gttcaattgc tacatccgaa
     7861 caatccgatt cggaccgaag ttcgttgtat cggcttcctt gcaactctgc tggagaagca
     7921 ggggacggtc gcatatggcg tcaggcgttg atgggatctg ctgctgaatg atcaggacga
     7981 agtttctttc acgaaaaaac cggatcgccg ggccgcgggg ccggcgcgcc tttgcgatcg
     8041 gcgacgttca cggctgcctc gatctcctcg aggacctgct tgctcggatc caggcggaaa
     8101 ttgacgagaa tccgaagccc aagacgagca tcatcttcct cggagacatc atcgatcgcg
     8161 ggcccgcctc cgcacaggtc gtggagcggc ttcgcaccta ttcgccgcgg ggcgcgagcg
     8221 cgcatttcgt catgggcaac catgaagaag tgatgctgcg ggtcctggaa ggcgaaaccg
     8281 acatgctcgc gagctggctt cgcttcggcg gagccgaaac cctgcgaagc tatggcctcg
     8341 agccgcgcga gatcgccaag ctcccggatg aggagatgtt gtcgcgactt cgcggcgcaa
     8401 ttcccgccag gcacgtccag ttcctgaaca gctttgccga cagcatctcc tttggcgact
     8461 atttgttcgt ccacgccgga atccggcccg gagtggaaat ttccgaacag agccagtcgg
     8521 acctgcgctg gatcagggct ccgttcctgg aagattccac cgatcacggc ttcatcgtcg
     8581 ttcacggcca cacgattacc aacgaagtcg atgtcgcgcc gaaccgcatc gggatcgaca
     8641 ccggcgcctt ttgcactggc acgctgactg cgctggcgat cgaagggccg cgccgctggt
     8701 tcatccagac tcccgccggg cagccagccc ggtcctcatc gattagcgca tgaaacgaac
     8761 ggctttcgct tgccggacaa gtgggttagt tgagttaccg aagatttctg gagggatgaa
     8821 ttcatgatcg gttacgggcc cggatcacgc atacgcaaca tgctttgcct tgtcgcagtc
     8881 gcgtgttctt tggcgatcgg tggatgcacc gaccgccgcg gcggctcgat cccgtacaac
     8941 gtcagcgact tcggagcgcc ggacccgctt tcgtcccttg cgcttccaaa ggattacaag
     9001 atcgctccca tggatacgct ttcgatacgg gtgttcggaa tgcctgacct gacaggcgag
     9061 tatcaggtcg acctgctggg caatgtcgcc atgccgctgg ttggagacgt atccgcgctc
     9121 gacaagagcc ccgtcgagtt cgatcaggcg ctgacccgca agtacagcga aaaatatctc
     9181 gaaaatcccg acatcagcgt cgccgtcaaa tcgtcgaacg ggcgactggt gacggttgac
     9241 ggagcggtga ggaagggcgg cgcattccca gtcatcggcc ggatgacttt gatgcaggca
     9301 atcgccttgg ccgggggcgc cgaccccaag cttgcgaaca tgcgccgagt tgcgattttc
     9361 aggaccatcg acggcaagcg acaggccgcg gcattcgatc tgctgagcat ccagcgtggc
     9421 gagatggacg atccctcaat ctattccggc gacatcgtca tcgtggacgg ctcgaacctg
     9481 aaggaaatgc aggaaaatct ccttcggacc atcccgctgt tcaatatctt ccggccgttc
     9541 tagctcaacg gcttccgcaa cggccggccg gaccgcgcag tccggcggcg cggcctcgcc
     9601 ggcaatacgc agccctgcag cgcaaggctc gataactgtg ttgtttctgc aacggtgcgt
     9661 gctacggcag agggaatgga tgcccccgca gccgaatcgg atttgactcc agcgaagacc
     9721 agttggctcg agcgcgaacg cctcaacggg cgcttgtacc gttatgccga ggcgggcgcg
     9781 gcgattgcct tccttgtcgc tgccggagcc agcttccttc tgcttcggca ggaaccgcag
     9841 tcggcggcgc tgctctcccc gccgctggtg gcgatgctgc tggttgccaa cctgattccg
     9901 gcaatcgcgc tgatggtcct gttttccagg cggatcgcga tgcgtcgagc ggagagggga
     9961 gggctcggca ctggccgtct ccacacgcgc ctcgtggccc tcttctcggt catcgcagcc
    10021 gtccctaccg tcctcgtcgc gatcttcgca tcggtgctgt tccagagcgg tctcgacttc
    10081 tggttctccg atcgcgcccg gggattgctg gagaacacca ccgaagtcgc gcagagcact
    10141 taccgcttcg aattctccag agtcggggtc gaggcgacga cgatggccgg cgaccttgcg
    10201 acctacgtgg gcgaattccc gctcgacgac ccgaaattcc aggagggcgt cgcctaccag
    10261 acctaccggc gaagcctcaa cgaagccgcg gttctcaccg tcggcgacga cggcaatgtg
    10321 cgcacgctgg cactggtcaa cgcatatgaa gggatgatcg tcccggataa gatcaaggtc
    10381 gccgcgctcg agctaaacgc gggagaggtc gccggaatcg aagcgccgaa cagaattgca
    10441 ctgctgactc cgatccctgt cgacgaatcc acctatctct acgtggcccg gtacattgac
    10501 ccggaaatcg cctcgcagat tgcccgggcg aaccgagtcc tcgccgatta tcatgcgctc
    10561 gtgaaagggt cgtggctcaa ccagcttcga ttcaacgcgg cgctgttgtt cgggtcgctg
    10621 atcatcgtcg cgcttgcgat ctttgcagcc cttcgcctcg ccgaccgcct cgtccgccct
    10681 gtcgggcagc tcgccgatgc cgcggggcga atcgaggagg gggatttttc ggcccgagtg
    10741 ccgatcacca acaccgagga cgagattgc
//
LOCUS       DATAKH010000111        21861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_17590,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000111 DATAKH010000000
VERSION     DATAKH010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 21861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21861
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17590"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="VHN55_04670"
     CDS             <1..591
                     /locus_tag="VHN55_04670"
                     /inference="COORDINATES: protein motif:HMM:NF016873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEX2803260.1"
                     /translation="RSRFEFDLNRPPEGALYLRPEESWGLEVWKTQPDADFVQRSLDI
                     HSRYFRMLEQLLDGVAGRHERFVLIDVHSYNHRRQGPDSPATPVEEAPDINIGTFSMP
                     RDHWGFLLDPLIEALRGFNFNGRKLDVRENVAFEGRGYQTRFIHERYPLRGCAIALEF
                     KKFFMDEWSGVPDQAELAAMRRFVGFMASKCEELLQ"
     gene            588..2426
                     /locus_tag="VHN55_04675"
     CDS             588..2426
                     /locus_tag="VHN55_04675"
                     /inference="COORDINATES: protein motif:HMM:NF019626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine/phenylalanine carboxypeptidase
                     domain-containing protein"
                     /protein_id="HEX2803261.1"
                     /translation="MNARPRLKLASSFDELRFGPRGELRETFATSGRIHLDRWLPFLL
                     VHRSGSPEQSIGRKIALNSPAYLIWSPEDDAEAESALGLLVERLSDEVGPVLLVELSD
                     APFEPQQEDSPKLPKFEVGVAASKQRPSQAALEAVTSALQDVEIELRQAEVRTDDLGA
                     PLLEVDGAQRLSLTIPQIHRAPNGRIYPQLSHELVAALIDCILCAAAAFMGEASDARP
                     RHFRSLGRSAFLTAALKADKKLDAIARSYDFLLSISPINTAEVRERFFGEGEQSTPEF
                     RYRPLTVDPDLVKRDLYDIDLSILEDLLLEQLLCEKRREIDMQLTMLATRNSPAFRAA
                     SMLLYGAVTDELLATARTILEQVKPKRTANGSFDASEVAAAAVELVERYRSIDNRFEA
                     RVEVRDDVSGLLVSGDRVMISSDSKIAANRLDPLLSHEVSVHLLTYFNGATQGLTIFR
                     TGLAHYEGIQEGLGVFAEWAVGGLTPARLRLLAGRVLAVDSMLHGADFLDVYRMLREE
                     FGFTRNSAFDISARVFRSGGLAKDAIYLKGFLEIVDRVATGSSLDAFWLGKIAPEHVD
                     AVEELLQRGLLHPPVFEPEFLSREDVRLRIAALGGGRALDRILELE"
     gene            2423..3478
                     /locus_tag="VHN55_04680"
     CDS             2423..3478
                     /locus_tag="VHN55_04680"
                     /inference="COORDINATES: protein motif:HMM:NF009110.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthetase"
                     /protein_id="HEX2803262.1"
                     /translation="MTDLLIAFFVNDIEREYENYTTTTLAHAAVKRDHDVCYVTPSDF
                     ALNSDDSLSVHARFVPKRKYKARSDFFKALKSSEDCKIRRIDVTDIDVLMLRNDPSID
                     FDRPWAMESGILFGREAAKRGVIVLNDPDSLGRAVNKLYFQSFPAQARAETLITKHAE
                     DIKAFAKQHKGNIILKPLQGSGGTGVFKVDPKEKGNLNQMIEAIGRDGYIIAQAFVPA
                     AKKGDIRLFMMNGDPLQIDGKYAALRRVAAAGDIRSNIHAGATREAVEIGEKELRVAE
                     LIRPKLIADGMFLVGIDIVGDKVLEANVFSPGNLESCSELAGVDFTGPVIDSIERKVA
                     VAKQYEGAFDNRHLAVL"
     gene            3536..5014
                     /gene="guaB"
                     /locus_tag="VHN55_04685"
     CDS             3536..5014
                     /gene="guaB"
                     /locus_tag="VHN55_04685"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008066722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEX2803263.1"
                     /translation="MADPIPTSDIPLGLTFDDVLLQPLESSVLPSQADTKTNLTREIP
                     LNIPILSSAMDTVTEADMAIALAQLGGIGVLHRNLSVEDQAAAVRAVKRFESGMVVNP
                     ITMRPEQTLAEALELMKTNRISGIPVVEKSGKLVGIVTNRDVRFAESPKQPISELMTS
                     ENLAKVAIGTSQEEARRILHQRRIEKLLVVDEDDRCVGLITVKDIEKAVAAPLATKDA
                     EGRLRIAAATTVGDKGFERSQALIEAGCDCIVIDTAHGHNVDVGRAVERVKTLSNSVQ
                     VIAGNVATAEAAKSLAGSGADAIKVGIGPGSICTTRIVAGVGVPQLTAVMEASSAARK
                     AGVPVIADGGIRTSGDIAKALAAGASAVMVGSLLAGTEEAPGEIFLYQGRSYKSYRGM
                     GSVGAMARGSADRYFQQDITDQLKLVPEGIEGQVPYKGPVREIIHQLVGGVKAAMGYT
                     GSATIADLQKRAKFVRITNAGLSESHVHDVSITREAPNYPTR"
     gene            5018..6193
                     /locus_tag="VHN55_04690"
     CDS             5018..6193
                     /locus_tag="VHN55_04690"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEX2803264.1"
                     /translation="MTPAARLQAAIEILDIVIGSAREDGPPADSIVTRYFKTRRYAGS
                     KDRRAVRELAFRAIRRTAERPESGRAAILGLAAEDPGLIDLFGQVRGPQTLCDGEPSS
                     PAGIVPEWLVSELSPRVKRDEWPALIERAPLDLRINLARTTREAMLSEFPVARPTPLS
                     PWGLRLPPDSRIDDSTAYREGLVEVQDEGSQLIALACDPKPDQRILDLCAGAGGKALA
                     IAAAAPGVTILATDSNRARLSKLQPRAERAGTAIESRLLNPPRELQELEDWRAAADVV
                     LVDAPCSGSGTWRRNPEARWRLTSERLDRLVALQGRLLGIAAELVRPGGSLVYAVCSL
                     LAREGAGQVAEFLGSRSDWVAQDILDAAGRLDGSGRLLTPAHDATDGFFIARLRKPC"
     gene            6203..6709
                     /locus_tag="VHN55_04695"
     CDS             6203..6709
                     /locus_tag="VHN55_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007711767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803265.1"
                     /translation="MEKVMRISLRFLALGAAATLVASPVIGQRPDNQIAPVSVELQQR
                     AESLMAAGKLSEAADLLETALAVDPRNRSAFVDLARGAKQQKVFGKAIRLANEALELE
                     PNDLDAIEIQGEAMVELGAIPRARENLAKLQKLCPGDCRQVAALSRAINRGPTVASAS
                     TPDSTEKN"
     gene            complement(6706..7524)
                     /gene="rsmA"
                     /locus_tag="VHN55_04700"
     CDS             complement(6706..7524)
                     /gene="rsmA"
                     /locus_tag="VHN55_04700"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010186485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEX2803266.1"
                     /translation="MSLPPQPLRDVIARHGLQASKALGQNFILDRQLLARIAAVPGSI
                     AGDTVYEVGPGPGGLTRALLEAGARVVAVERDRRFLPALSELAEDFPGYLEIVEGDAL
                     KLDEAARLGRGARVVSNLPYNVGTALLLRWLTVDWPPWWRSLTLMFQKEVAERIVAPA
                     GSGAYGRLSVLAQWRAEPRIAMQVNRSAFVPPPKVASAVVHITPREMPSGVNPDRIGQ
                     LTEAAFGQRRKMLRSSLRNVPEALEALNSLGIDPTRRAETLKVGDYVALARALS"
     gene            complement(7521..8519)
                     /gene="pdxA"
                     /locus_tag="VHN55_04705"
     CDS             complement(7521..8519)
                     /gene="pdxA"
                     /locus_tag="VHN55_04705"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX2803267.1"
                     /translation="MTPPPAPLAVSLGDPAGIGPEVLAKCWDNRGRFELAPFVAIGDP
                     RSLRAVWDGPVATIDDPREADTAFDVGLPLIPVPSPEEDRPGHPSVAGAHCSLDALEL
                     AVGLARSGSAAAVVTGPVSKQQLYSIGFSHPGQTEFVAERCGIAAANVVMMLAGPTLR
                     TVPVTTHIPLRDAPDLLTVSLIESRGRTTLRGLQRNFGIAEPRLAVTGLNPHAGEGGL
                     LGRAEIEVIEPAIAALRAEGWRVSGPHPADTMFHETVRARYDAALCMYHDQALIPVKA
                     LHFADAVNITLGLPIIRTAPDHGTAFDIAGEDRADPRPMAAALRLAAQAALNRSAA"
     gene            complement(8530..9900)
                     /locus_tag="VHN55_04710"
     CDS             complement(8530..9900)
                     /locus_tag="VHN55_04710"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX2803268.1"
                     /translation="MAVSEYLRARGRLGLVIVALGAATAAFAQTQAAPDQAASQSAPG
                     SRPLNLPENPQLFGTSLPSVVKATAIVNGEIITQSDIDRRIALLAMANGGSVPADQMD
                     ALRQQVLGNLIDETLQIQAAKADKIVVSERDIDRAIQRISEDNKQTPEQLAEYLKANG
                     SSIKSVRRQIEGEIAWRRLQQYRIESSVSVGEDEVQAVLDRLNASKGTDEYRVGEIYL
                     SAPGGDLSRATAMANQIIEQLKQGASFGAIARQYSEASTAAVGGDLGWVRPGQLPPQL
                     AAVVETLQPGQISTPIPVPGGVSLVAIQDKRKVLAPDPRNAVLSLKQVSVTFPKGSAR
                     EQVEPIVARFAQAAQNIGGCGGAEKIASDFGGEVVSSDEVKLRDLPPALQEIMLPMQV
                     GQATQPFGSIEEGVRILVICGRDEVDPTAPTFDQVYTQLNEERMNLRARRYLRDLRRD
                     AVIEFR"
     gene            complement(9967..12300)
                     /gene="lptD"
                     /locus_tag="VHN55_04715"
     CDS             complement(9967..12300)
                     /gene="lptD"
                     /locus_tag="VHN55_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HEX2803269.1"
                     /translation="MAKPARRDDCGAGPFPAKAIAGRPQGAIVAWIKVKRAEGERLRK
                     RVIWWTALPLVGLPAVAPAAQPADPAAPAATQEAEAVEFTADELIYDSENDVVSAAGQ
                     VRMARDGNYLAADRITWNRKTGEVRAEGNVVVVDPQGDKILGENVVLTDTLRDGIVSN
                     LLVVLESGGRIAAQRGTRAGDIVTLDNAAYSPCPVTNEAGCPKRPSWMITAARVVYDP
                     ATKRAKFQGGRLQLFGLTLPLLPIFSVGTSGEGATGWLVPQLKVSRKNGFEVAVPYYW
                     HIAPNRDLAVIPHVYTGTLPAIEAKYRELNSLGAFQLGGFLAYSRVENADLTSSSDGD
                     RDLRGFFEGNGKAQLDPLWSVTGSFRVASDKTVSRRYDITRDDRLRNSLIAERITPDS
                     YVSIAGWAFQGLRVDDVQEQIPIALPALDARLNLTPPVFGGKVKLQANSLAIMRIDGQ
                     DTQRAFASARWDLRRLTTWGQQLTLTGYLRGDVYHTDEADETVVPIYRGTDGWHTRGI
                     AAVAADLQWPLIGPLFGGIQRLVPRVQIVATPATPNLAIPNEDARAVDLEDSNLFALN
                     RFPGYDRWEDSSRITYGVDWHYERPNLSISTSVGQSYRLNRRPEIFPEGTGLTGRLSD
                     IVGRTRVRYGRFIDLTHRFRVDKDNLAVRRNEIDLTVGSDQTFAQIGYLRLNRDIDPS
                     VEDLRDRQEVRLAGRVKFARYWSIFGATVIDLTGKGEDPLSVADGWEPVRNRLGIAYE
                     DECLELGVTWRRDYERLGEFRKGSTFALQIGLKGLGR"
     gene            12368..13834
                     /locus_tag="VHN55_04720"
     CDS             12368..13834
                     /locus_tag="VHN55_04720"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEX2803270.1"
                     /translation="MKIDFAASRPDGDYALVIPSAAKVCPAAETLADKSKVEAALERQ
                     RFDGDSGSSAELFIDDGGTTRRLLVVGTGKDSVPAEAAEKLGGSAAAKLLKSGETHAV
                     IDVSGLGYDADAAARVALAAALRSWRYDRYRTKLKDKQKPTLKTVTVVGGGEGAADRW
                     KNRWEPVAEGIDLTRGLVTEPANVIYPESFVDRCRDLSKLGIQMDVLDAEQMKALGMG
                     ALLGVAQGSIREPRLLVLRWNGGKQGEAPTAFVGKGVTFDTGGISIKPAQGMESMKWD
                     MGGAAAVVGAMKALALRKAKSNIVGICGLVENMPGGNAQRPGDVVTTMSGQTVEVINT
                     DAEGRLVLADAITYVQRKYEAKTIIDLATLTGAILVSLGHEFAGLFSPDDELAGKLLK
                     AAEQSGDKLWRMPLAEPFDRLIDSPIADVKNVGPREGGSITAAQFIKRFVENGTTWAH
                     LDIAGMAWSDKPSSTYDKGATGYGVRLLDQFVADNLEG"
     gene            13843..14304
                     /locus_tag="VHN55_04725"
     CDS             13843..14304
                     /locus_tag="VHN55_04725"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEX2803271.1"
                     /translation="MRVDFYQLGTVALEQVIAKLAEKLLGEEERLLVVAADDAQVARL
                     ERVLWEHGGATSFLPHGTAGGSEDSRQPVLLSTSPDAANRARNLLIADGHWREAALAF
                     HRAFYVFGTDTLEEARATWRSLGGRDGIERHYWANEDGRWVEKAAAARPAA"
     gene            14536..15642
                     /locus_tag="VHN55_04730"
     CDS             14536..15642
                     /locus_tag="VHN55_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803272.1"
                     /translation="MYSQNDLDDAVAAGAMSAESAAALRNFIETQRSAPAVDEEQFRL
                     ITGFNDIFVSIASIILLVAVAWIGQSIGQSLGTSVDVDGPSFLAPAAVGVTAWCLALF
                     FTAKRRMALPSILLLLAFVGAVFATVAFVGALAVGEPPKEQEGLYVGVIAAIAGAVAA
                     GAAWLHWKRFRVPITVAAGAAAVAAIVVGLLIAVLGDPENYKNAVLGVVLLLGVGVFL
                     FAMRWDSSDPGRLTRRSDVAFWLHLLAAPMIVHPVFTLLGLNDGNATIGEGLVVVLLY
                     ILMGLAALAIDRRALLVSALAYVLFALQELFKQFGAIELNVALTALVIGSSLLLLSAF
                     WHQAREAVVRPLPDGLRAKLPLLGDSRTVSQPAA"
     gene            complement(15623..15964)
                     /locus_tag="VHN55_04735"
     CDS             complement(15623..15964)
                     /locus_tag="VHN55_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2794 domain-containing protein"
                     /protein_id="HEX2803273.1"
                     /translation="MSVIAPFPHPRDRRPITAFDRRELMRIMDLYGRMVAAGHWRDYA
                     LGHHPDLAVFAAFRRHTERPEVRIEKRPELRLKQGAFALVGEHGLVLKRGHDLSGVMA
                     PLERRLMRLVG"
     gene            complement(15961..16650)
                     /gene="epsC"
                     /locus_tag="VHN55_04740"
     CDS             complement(15961..16650)
                     /gene="epsC"
                     /locus_tag="VHN55_04740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008070311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase EpsC"
                     /protein_id="HEX2803274.1"
                     /translation="MFSGLIEYLDSVEARDPAARSRWEVLIYPGAWALALHRVAHWFY
                     GGGLYFLARCVNHFARFLTAIDIHPGAVIGKRFFIDHGFTVIGETAEIGDDVTIYQNV
                     TLGGTSPHEGKTGKRHPTICDHVVIGSGAQVLGPLEVGEGARVGANAVVTRDVAPGAT
                     VIGIPAKPIPVDIETAEPAEFLPYGTPCNEIADPTLARLCELEREIRALREEVKTKQS
                     GEAAAVRSKRA"
     gene            16781..17746
                     /locus_tag="VHN55_04745"
     CDS             16781..17746
                     /locus_tag="VHN55_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX2803275.1"
                     /translation="MTVHQPTIKQLQYLVALREHGHFGKAAEACFVTQSTLSAGLREL
                     ESLLGVTLVERTRRVVRFTALGEKVADKAIRVIRETEELAELARAEGKPLHGELRMGV
                     IPTIAPFLLPAMLPRLRREWPSLKLYLREETSQAACEALHRGQLDCVLLALPFACGDV
                     DSAPLFEDRLFVAFPRGEAPRGAVVDVGAIDEQRMLLLEDGHCLKDHALSACNRPEMR
                     ANAAMMGTSLHTLVQMVDNGLGLTFVPEMAIDAGILDGTRVDAKPLRSSQNYRKVALI
                     WRRSSPRESEFQLLASSLRSIIDDLVPASLSSAETAAREQSAPRR"
     gene            complement(17736..19997)
                     /gene="katG"
                     /locus_tag="VHN55_04750"
     CDS             complement(17736..19997)
                     /gene="katG"
                     /locus_tag="VHN55_04750"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HEX2803276.1"
                     /translation="MDAKTGEMGGCPMGNGEDGGVRALLGRTNKDWWPEMLATEILNP
                     NGPTNPHGEDFNYAEAFKELDYNALKADLKALMTDSQPWWPADYGHYGPFFIRMAWHA
                     AGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGKNISWADLFIL
                     AGNVAIESMGGPVFGFGGGRADVFEPERDIYWGSEDKWVNEGVQTRISPEHGMHELEG
                     PLAAIQMGLIYVNPEGPGGNPDPLQSARDIKATFERMAMNHEETVALTAGGHTFGKAH
                     GNGDPSKLGPAPAGGDLVAQGFGWVSQNESGCGEHTVTSGIEGSWVNTPTQWSENYFR
                     LLLDYEYELVKSPAGAQQWQPINQKPEDMAPAAWDPNKKVPTMMTTADMALKVDPEFR
                     VISEKFRNDHEAFKDAFARAWFKLTHRDMGPKARYLGPEVPAEDLIWQDPIPAGTMPS
                     DAEVEAVKRKIRDSGLTVSQLIKTAWASASTYRKSDHRGGANGARIRLAPQKDWEVNE
                     PEMLAKVLSTLDGLRGSMSMADAIVLGGVVGLEKAGATHVPFTGGRGDATEEQTDADS
                     FAVMEPEADAFRNYVGKKKLAVKTEEMMLDRASLLGLSVPEMVVLVGGLRVLGANHGE
                     RGHGHFTKRSGQLTNDFFVNLLDMTNVWSSVEGSNDEEYVATDRTSGGETWRATRADL
                     IFGSNSELRAQCEVYAEEGGQEKFVKDFVKAWTKVMNADRFDLPQEKSRAEPIGIAEP
                     ATADGELDPEVSA"
     gene            complement(20122..20691)
                     /gene="pgsA"
                     /locus_tag="VHN55_04755"
     CDS             complement(20122..20691)
                     /gene="pgsA"
                     /locus_tag="VHN55_04755"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010164479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEX2803277.1"
                     /translation="MLTLPNLLTLSRILAVPILVFLLWQPRPFDYAVTFVLYCIVGLT
                     DYFDGYLARAQGQISKLGQFLDPIADKIMIAAVIVMLVASRKADGNPPILQDFDIIPA
                     LIILLREIIVSGLREFLAELRVSMPVSHLAKWKTTLQLVALGALILGGALPSQPWIHT
                     VGLASLWAAAALTLVTGYDYLRIGLKHMD"
     gene            20788..>21861
                     /locus_tag="VHN55_04760"
     CDS             20788..>21861
                     /locus_tag="VHN55_04760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2803278.1"
                     /translation="MQDSLHLLKTRRFLPLFATQFLGAFNDNLYRTAAVMLAIYGIYG
                     DETQEATFSAIAAGLFILPFFLLSALSGQLADERDKARIIRLVKTAEILIMIVGAIGL
                     LVQNVPLLLAALGAMGIHSTFFGPIKYAILPQHLEKGEVLGGTGLVEAGTYIAILGGT
                     ILGGLLVVRGSDGQFHAIWAAVAVLVVAVIGRIAGGQVPPAPPDPAAPPWKMDWHIVR
                     ASITLVNATLHVPRLFLAILSISFFWAMGTVLAAQFPPLVKNSLSADQSVATLFLAIF
                     SVGVAIGSIAVNRLLKGKVAARFAPASAIGMGLFVLDLFRRVHSWPQLPGDQLNGIAA
                     FLAMPNGPWVVFDLLGVAIAGGMF"
BASE COUNT         3788 a         6991 c         7067 g         4015 t
ORIGIN      
        1 cggtcccgtt tcgagttcga cctcaaccga ccgcccgaag gagcgcttta cctgagaccg
       61 gaagagtcct ggggactgga ggtgtggaag acgcagcccg acgcggactt cgtccaacgt
      121 tcgctcgaca tccactcacg ctacttccgg atgctcgagc agcttctcga cggtgtcgcc
      181 ggtcgccacg aacggttcgt tctgattgac gtccacagct acaatcaccg gcgccagggt
      241 ccggattcgc ccgcaactcc ggttgaggaa gcgccggaca tcaacatcgg cactttttcg
      301 atgccgcgcg accattgggg attccttctc gacccgctga tcgaggcgct tcgcggcttc
      361 aatttcaacg gccgaaagct cgacgtgcgg gaaaatgtcg ctttcgaggg cagagggtac
      421 cagacgcgct tcattcacga gcgctacccg ctccgcggct gcgcgatcgc actcgagttc
      481 aagaaattct tcatggacga gtggagcgga gtgcccgacc aggcggagct cgctgctatg
      541 cggcggttcg tcggcttcat ggcgtcgaaa tgcgaggagc ttctgcaatg aatgctcgac
      601 cgcggctaaa gctcgcatca agcttcgacg aactgcggtt tggtcctcgc ggcgagcttc
      661 gggagacgtt tgcgacgagc gggcgaatcc acctcgaccg ctggcttccg ttcttgttgg
      721 tccatcgctc cggtagcccc gagcagagca tcggacgaaa gatcgcgctc aacagccccg
      781 cctatttgat ttggtcgccc gaagacgacg ccgaggccga gagcgcgctc gggctactcg
      841 tcgagaggct cagcgatgag gtcgggccgg tgttgctggt cgagctctcc gacgctccgt
      901 tcgagcccca acaggaagat tccccgaaac ttccgaaatt cgaggtcggc gtcgccgctt
      961 caaagcaaag gccatcgcag gcggcactgg aagcggtcac cagtgcgctg caagacgtgg
     1021 aaatcgagct tcgccaagcg gaagtcagga ccgacgatct tggcgcgcca ttgcttgaag
     1081 tggacggagc gcagcgcctg tcgcttacaa ttccgcaaat ccaccgagcg ccgaacggta
     1141 ggatttaccc gcagcttagc cacgagcttg tcgcagcgct gatcgactgc atcctatgcg
     1201 cggctgcggc cttcatgggg gaagcctcag acgctcgtcc caggcacttc cgctcactcg
     1261 gccgaagcgc gtttctcacg gctgctctga aggctgacaa gaagctcgat gcaattgctc
     1321 gaagctacga tttcctgctg tcgatctcgc cgatcaacac agccgaggtg cgggagcggt
     1381 tcttcggcga aggcgaacaa agcacgccag agttccggta ccggccgctg accgtcgacc
     1441 cggacctggt caagcgcgat ctctacgaca tcgacctgtc aatcctggaa gacctgctcc
     1501 tagagcaatt gctgtgcgag aagcgtcgcg agatcgacat gcaactgacg atgctcgcta
     1561 cccgaaactc gccagcgttc cgggctgcct cgatgctcct ctatggcgcg gttacggacg
     1621 agctgcttgc tactgcgcga accattctcg aacaggtgaa gccgaagcgg acggcgaacg
     1681 gcagcttcga cgcgagtgaa gttgccgccg cagcggtgga actcgtcgag cgctatcggt
     1741 cgatcgacaa ccgcttcgaa gcgcgggtcg aagtccgcga cgacgtttca gggctcctcg
     1801 tatcgggcga ccgcgtgatg atctcgagcg attccaaaat cgctgcgaac cgcctcgacc
     1861 ccctcctttc gcacgaggtc agcgtgcacc tgttgaccta tttcaacggc gcgacccaag
     1921 gcctgacgat tttccggacc ggccttgccc attacgaagg catccaagag gggctcggag
     1981 tctttgccga atgggccgtc ggcggactga cgcctgcgcg gcttcgcctg ctcgccgggc
     2041 gcgtcctcgc agtcgattcg atgctccacg gcgccgattt cctcgacgtc tatcgaatgc
     2101 tccgcgagga attcggattc acccggaaca gcgccttcga catctccgcc cgcgtgtttc
     2161 gctcgggcgg gctggccaag gatgcaatct atctcaaggg ctttctcgag atcgtcgacc
     2221 gggttgcaac cggttcttcg ctggacgcgt tctggctcgg gaaaatcgcg ccggagcacg
     2281 tcgatgcagt cgaggagctg cttcagcgcg ggcttctgca tccgcctgta ttcgagcccg
     2341 agttcctttc ccgcgaagat gttcggctac gcatcgccgc gctaggcggc ggcagggcgt
     2401 tagatcgaat ccttgaactg gagtgactga tttgctgatc gctttcttcg tcaatgacat
     2461 cgagcgtgag tatgagaatt acactacgac gacactcgct cacgccgcgg tcaagcgcga
     2521 ccacgacgtc tgctacgtca ctccgtccga tttcgcgctc aattccgacg acagcttgtc
     2581 ggtccacgcg cggttcgtgc ccaagcgcaa gtacaaggcg cgaagcgatt tcttcaaagc
     2641 gctgaagagc agcgaagact gcaaaatacg ccggatcgat gtcaccgaca tcgacgtcct
     2701 gatgcttcgc aacgacccgt cgatcgattt cgatcgcccg tgggcgatgg aatccgggat
     2761 cctgttcggt cgcgaggcgg ccaagcgcgg agtcatcgtc ctcaacgatc ccgacagcct
     2821 cggccgggcg gtgaacaagc tgtatttcca aagctttccg gctcaggcgc gagcggaaac
     2881 gctgatcacc aagcacgccg aggacatcaa ggcctttgcc aagcagcata aggggaacat
     2941 catccttaaa cccctccagg gttcgggtgg aaccggggtg ttcaaggtcg atccgaagga
     3001 gaagggcaac ctcaaccaga tgatcgaggc gatcgggcgc gacggctaca ttatcgccca
     3061 ggcgttcgtc ccggcggcca agaagggcga tattcgcctg ttcatgatga acggcgaccc
     3121 gcttcagatc gacggcaaat atgccgccct gcgccgtgtc gcggccgccg gggacatccg
     3181 ctccaacatt cacgccggcg cgacccgtga agccgtcgag atcggtgaaa aggaattgcg
     3241 agttgcggag cttatccggc ccaagctgat tgccgacggg atgttccttg tcggaatcga
     3301 tatcgtcggc gacaaggtgc tggaagcaaa tgtcttttcg ccgggcaacc tagagagctg
     3361 ctcagagctt gcgggagtcg actttaccgg ccccgtcatc gattcgatcg agcgcaaggt
     3421 ggcagttgcg aagcagtatg aaggcgcgtt cgacaaccgg catcttgccg tcctgtaggg
     3481 agtgaatcag gcgctcgccc cttggcgaat cgcggctgct ctgtcatggg ccgatatggc
     3541 cgacccgatt ccgacatccg acattcccct gggcctgacg ttcgacgacg tccttctcca
     3601 gccgctcgaa tcgagcgtgc ttccaagcca ggcggacaca aaaaccaacc tgacgcgcga
     3661 aatcccgctc aacattccga ttctttcgtc ggcgatggac acggtgaccg aagccgacat
     3721 ggcaatcgcc ctcgcccagc tcggaggtat cggcgttctt caccgcaatc tgtcggttga
     3781 ggaccaggcg gcggcggttc gagcggtcaa gcgcttcgaa agcgggatgg tggtgaaccc
     3841 gatcacgatg cggcccgagc agacgcttgc ggaggcgctg gagctgatga agacgaaccg
     3901 gatcagtggc atcccggtgg tcgagaagtc cggcaagctg gtcggaatcg tcaccaatcg
     3961 cgacgtccgc ttcgccgaga gcccgaaaca gccgatctcc gagctgatga ccagcgaaaa
     4021 tctcgccaag gtcgcgatcg gcaccagcca ggaagaggcg cgccggatcc tgcaccagcg
     4081 ccggatcgag aagctgctcg tcgtcgacga ggacgaccgc tgcgtcggtc tcattaccgt
     4141 caaggatatc gagaaggccg tggccgcgcc gctcgcgacc aaggatgccg agggccgcct
     4201 taggattgct gccgcgacga ccgtcggcga caagggattc gagcggtcgc aggcgcttat
     4261 cgaggctggc tgtgactgca tcgtcatcga taccgcgcac ggccataacg tcgacgtcgg
     4321 ccgcgctgtc gaacgggtca agacgctgtc caactcggtc caggtgatag ccggcaacgt
     4381 tgcaaccgcc gaggccgcga aatcgctggc tggttcgggc gccgacgcaa tcaaggttgg
     4441 gatcggaccc ggctccatat gcacaacccg gatcgtcgcc ggggtgggag ttccgcagct
     4501 caccgcggta atggaggcat cgtcggctgc cagaaaggcg ggtgtgccgg tgatcgccga
     4561 cggcggaatt cgaacgagcg gagatatcgc aaaggcgctc gcagccgggg catcggcggt
     4621 gatggtcggg tcgcttctcg ccggcaccga ggaagcgccc ggcgagatat ttctctacca
     4681 gggccgttcc tacaaatcct atcgcggcat gggatcggtc ggggcaatgg cgcgcggttc
     4741 cgctgaccgc tatttccagc aggacatcac cgaccagctc aagctcgttc ccgagggcat
     4801 cgaagggcag gtgccgtaca agggcccggt tcgcgagatt atccatcagc tggtcggcgg
     4861 agtgaaggcg gcgatgggct acaccggatc ggcgacgatt gccgatctgc agaagcgagc
     4921 gaagttcgtt cggataacca acgccggtct gtcggaaagc catgtccacg atgtatcgat
     4981 cacccgcgag gcaccgaatt atccgacacg gtgaggcatg acgcccgcgg cgcgactgca
     5041 ggcggcgatt gagatcctcg acatcgtgat cgggtccgcg cgcgaggacg gccctcccgc
     5101 cgattcaatc gtgacccgct atttcaagac ccggcgctac gccggctcga aggaccggcg
     5161 ggctgttcgg gagctcgcct tccgtgcgat ccggcgcacc gccgagcggc cggaaagcgg
     5221 gcgagcggcg atcctcggcc tcgccgccga ggatcccggt cttatcgacc tgttcggcca
     5281 agttcgcggc ccccagacgc tgtgcgacgg cgagccttcc agcccggcgg gcatcgttcc
     5341 cgaatggctg gtttcggagc tgtccccacg ggtcaaacgc gacgaatggc cggcgctgat
     5401 cgaacgggcg ccgcttgacc tgcggatcaa cctcgcccga acaacgcgcg aggcaatgct
     5461 ctccgagttt cccgttgctc ggccgacgcc gctcagcccg tggggattgc ggcttccgcc
     5521 cgacagccgg atcgacgatt cgacggcata ccgcgaaggc cttgtcgaag ttcaggatga
     5581 gggaagccag ctgatcgcgc tcgcctgcga tccgaagccg gaccaacgca tcctcgacct
     5641 ttgcgccgga gccgggggca aggccctggc gattgccgct gccgcgcccg gagtgacaat
     5701 cctcgcaacg gattcgaacc gcgctcgcct gtcgaagctt cagcctcgcg ccgaaagggc
     5761 agggaccgcg atcgagagtc ggctgctcaa cccccctcgc gagctgcagg agctcgaaga
     5821 ctggcgggcc gccgctgatg tggtgcttgt cgatgctccc tgctccggga gcgggacatg
     5881 gcgacgcaac ccggaagcgc gctggcgcct tacttccgaa cggctcgacc gcctcgttgc
     5941 gctccagggg cgtcttctcg gcatcgcggc agagcttgtc cggcccggcg gttcgctcgt
     6001 ctacgcggtc tgctcgctgc tggcgcggga aggcgcgggg caggtggcgg aattcttagg
     6061 ctcacgttca gattgggtcg cgcaggatat tcttgacgcg gccgggcgtt tggacggcag
     6121 tggccgcctg ttgactccgg cgcacgacgc gacggacgga tttttcatcg cgcggctaag
     6181 gaagccatgc taaggcgcga ccatggagaa ggtaatgcgg atttcgcttc gttttctggc
     6241 gcttggggcc gcagcgacgc tcgtcgcgag cccggtaatc ggtcaacgtc ccgataacca
     6301 gatcgctccc gtgtccgtgg agctgcagca gcgggcggaa tcgttgatgg ccgcgggcaa
     6361 gctcagcgaa gccgcggacc tgcttgaaac tgctcttgcc gtcgatccgc gcaaccgatc
     6421 ggcgttcgtc gatctcgctc ggggcgcaaa gcagcaaaag gtgttcggca aggcgatccg
     6481 gctcgcaaat gaagcgctgg agcttgagcc gaacgatctc gatgcgatcg aaatccaggg
     6541 tgaggcgatg gtcgagctgg gcgcgatccc gcgcgccaga gagaatctgg ccaagctgca
     6601 gaagctgtgt cctggcgatt gccgccaggt tgcggccctt tcccgcgcaa ttaatcgggg
     6661 accgacggtg gcgtcggcga gcactccgga ctcgaccgaa aagaactagc tgagcgcgcg
     6721 cgccagcgcg acatagtcgc cgactttcag cgtttccgcc ctgcgtgtcg gatcgattcc
     6781 cagggagttg agcgcttcca atgcctctgg cacgttcctc agactcgatc tcagcatctt
     6841 gcggcgttgc ccgaacgccg cctccgtcaa ttgcccgatc cggtccggat tgacgccgga
     6901 cggcatctcc cgcggggtga tgtggacgac cgccgaggcg actttgggcg gcggcacgaa
     6961 tgccgaccgg ttcacctgca tcgcgatcct cggctccgcc cgccactgcg ccaggaccga
     7021 aaggcggcca tatgccccgc ttccggcagg agcgacgatg cgttccgcca cttccttctg
     7081 gaacatcagg gtcagcgacc gccaccacgg cggccaatcg acggtaagcc agcgaagcag
     7141 aagcgccgtg cccacattgt agggcaggtt ggacacgact cgcgcgccgc ggccgagccg
     7201 ggccgcctcg tcgagcttca aggcatcgcc ttcgacaatt tcgaggtagc ccggaaaatc
     7261 ctccgcgagc tcggacaatg ccggcaggaa ccggcggtca cgctcgacgg ccacgacccg
     7321 cgctccggct tccagaagcg cacgagtgag tcctcccggg ccaggtccga cttcgtaaac
     7381 cgtgtcaccc gcgatactgc cgggaacggc ggcaatcctg gcgagcaact gccgatcgag
     7441 gatgaagttc tggccgagcg ccttgctcgc ctgaagcccg tgcctggcga tgacgtcgcg
     7501 aagcggttgc ggcggcaagc tcacgccgcg gatcggttca atgcggcctg cgccgccagc
     7561 cggagcgccg ccgccatcgg ccgcggatcg gcgcggtctt cgcctgcgat gtcgaacgcc
     7621 gtgccgtggt cgggggcggt gcggattatc ggcaggccca gggtaatatt gacggcatcg
     7681 gcaaaatgca gcgccttcac cgggatcagc gcctggtcgt ggtacatgca cagcgcagcg
     7741 tcgtagcggg cgcggacggt ctcgtggaac atggtatcgg ccgggtgcgg cccgctgacc
     7801 cgccagcctt cggcgcgaag ggcggcgatg gcgggctcga tgacctcgat ctccgctctg
     7861 ccgagtaagc cgccttcacc ggcgtgggga ttgagcccgg taaccgccag ccgcggctcg
     7921 gctatcccga aattgcgctg cagtccgcgc aaggtcgtgc ggccgcgcga ttcgatcagg
     7981 ctcaccgtca gcaggtcggg ggcatcgcgg agcggaatgt gcgtggtcac cgggaccgtc
     8041 ctgagagtcg gcccggcgag catcatcacc acgttcgcgg cggcgatccc gcagcgttcg
     8101 gcaacgaatt ccgtctgtcc gggatggctg aatccgattg aataaagctg ttgcttcgac
     8161 accggcccgg tgaccactgc cgccgccgac ccagacctgg cgaggccaac ggcgagctcg
     8221 agcgcgtcga gcgagcaatg ggcgccggcg acgctgggat gccccggcct gtcctcctcg
     8281 ggcgacggga ccgggatcag cggcaacccg acgtcgaatg ccgtatcggc ttcgcgcgga
     8341 tcgtcgatcg ttgcaaccgg accgtcccac accgcccgaa gcgacctcgg gtcgccaatc
     8401 gccacgaaag gggcaagttc aaaccggccg cgattgtccc agcacttcgc tagaacttcc
     8461 ggcccgattc cggccggatc gccaagcgag accgcgaggg gtgcaggggg cggggtcacc
     8521 cgcgggccct tagcggaatt cgatcaccgc atcacgccgc aggtcgcgaa ggtagcggcg
     8581 ggcccgaagg ttcatccgct cctcgtttag ctgcgtgtag acctggtcaa acgtcggtgc
     8641 ggtcggatcg acttcgtcgc ggccgcaaat cacgaggatt cggacgccct cctcgatcga
     8701 gccgaacggc tgcgtcgcct ggccgacctg cattgggagc atgatttcct gcagggcagg
     8761 cggaaggtcg cgaagcttca cttcgtcgct cgaaaccacc tcaccgccga agtcgctggc
     8821 gatcttctcg gctccgccgc agccgccgat attctgcgcc gcctgcgcaa accgagcgac
     8881 aatcggctcc acttgctctc gggctgaccc cttggggaaa gtcaccgata cctgtttaag
     8941 gctgaggacg gcattccgcg gatccggtgc caacactttg cgcttgtcct ggattgcgac
     9001 gagggacact ccgcccggaa ccggaattgg tgtgctgatc tggcccggct gcaaggtctc
     9061 gaccaccgcc gccagctgcg gcggaagctg acccgggcga acccagccga ggtcaccgcc
     9121 gactgccgcc gtcgaagcct ccgaatattg gcgagcaatc gcgccgaacg aggcaccctg
     9181 cttcagctgc tcgatgatct ggttagccat cgcggtcgcc ctggaaaggt cgccgccagg
     9241 cgcagagaga tagatttccc cgacgcggta ctcgtccgtc cccttcgagg cgttcagccg
     9301 atcgagaacc gcctggacct cgtcttcgcc gacgctgacg ctggattcga tcctgtactg
     9361 ctgtagccgt cgccacgcga tctcgccctc gatctgccgg cggacggatt tgatggaaga
     9421 gccattcgct ttcagatatt cggcgagctg ctcaggcgtc tgcttgttgt cctcagagat
     9481 ccgctggatt gctcggtcga tgtcgcgctc ggatacgacg atcttgtcgg ccttcgcggc
     9541 ctggatctgg agagtctcgt cgatcaaatt gccgagcact tgctgtcgca gcgcgtccat
     9601 ctgatcggcg gggacactgc cgccattggc catcgcgagc agcgctatgc gcctgtcaat
     9661 gtccgattga gtaatgattt cgccgttgac gatggcggtc gccttcacga ccgaggggag
     9721 gctggttccg aacaactgcg gattttcagg gagattcaac ggccggctac cgggcgctga
     9781 ctgcgatgca gcctgatcgg gcgccgcttg cgtctgcgcg aacgccgcgg tggcggctcc
     9841 gagtgcgacg atgactagcc ccaaccggcc gcgcgcccgg agatattcag aaactgccac
     9901 tagaattttc cttattgccc aacatttccg cgaccttgcc cttaaccgcg cccgctgaac
     9961 gcaggcttag cggccgaggc ctttcaatcc tatctggagc gcgaaggtgc tacctttgcg
    10021 gaattccccg aggcgctcat agtcgcgacg ccaggttacg ccaagctcca ggcattcgtc
    10081 ttcataggcg atgccaagcc ggtttcggac cggctcccag ccgtccgcga cggaaagcgg
    10141 gtcctcgccc ttgccggtca ggtcgatcac cgttgccccg aagatggacc agtagcgagc
    10201 gaacttcacc ctgccggcca ggcggacttc ctggcggtcg cgcaagtcct ccacgctcgg
    10261 gtcgatgtcg cggttgaggc gaagataccc gatctgggcg aaggtctggt cgcttccgac
    10321 tgtaagatcg atctcgttcc tgcggaccgc gagattgtcc ttgtccaccc ggaaccggtg
    10381 agtgagatcg atgaagcggc cgtagcgcac tcgggtgcgg ccgacgatgt ccgaaaggcg
    10441 gccggtaagc cccgtccctt ccgggaagat ttcggggcgg cggttgagcc ggtagctttg
    10501 cccgaccgaa gtgctgatcg acaggtttgg ccgctcatag tgccagtcga ccccataagt
    10561 aatccgcgag gaatcttccc accggtcgta accggggaag cggttaagcg cgaaaaggtt
    10621 gctgtcttcg agatcgacag cgcgggcgtc ctcgttgggg atggccaggt tcggcgtcgc
    10681 cggagttgcg acaatctgga cccgcggaac caaacgctgg attccgccga agagcggccc
    10741 gatcagcggc cattgcaggt cggcggcaac cgccgcgatc ccgcgcgtgt gccagccgtc
    10801 ggtgccgcga tagatcggca ccaccgtctc gtctgcttcg tcggtgtgat agacatcgcc
    10861 ccgcaggtag ccggtaaggg tcagctgctg cccccaggta gtgagccttc gcaaatccca
    10921 gcgcgcgctg gcgaatgccc gctgcgtgtc ctgcccgtcg atccgcatga tcgcgaggct
    10981 gtttgcctgc agcttgacct tgccgccgaa gactggcggc gtcaggttga gccgggcgtc
    11041 aagcgccggc agtgcgatcg ggatctgttc ctggacgtcg tcgaccctaa ggccctggaa
    11101 cgcccatccc gcgatgctga cataggaatc tggcgttatt ctctcggcga tgagtgaatt
    11161 gcgaagccgg tcgtcgcggg taatgtcgta acggcggcta acggtcttgt cgctcgccac
    11221 cctgaaggag ccggtgacgc tccacagcgg atccagctgc gcctttccgt tgccctcgaa
    11281 gaagccgcgc aaatcgcggt cgccgtctga gcttgacgtg aggtcggcat tctcgacccg
    11341 gctgtaggcg aggaagccgc cgagctggaa cgcgccgagg ctgttcagct cgcgatattt
    11401 cgcttcgatc gccggaagag tcccggtgta gacgtgcggt attactgcca gatcgcggtt
    11461 cggtgcgatg tgccagtaat agggcacggc aacttcgaag ccgttcttcc tggacacctt
    11521 gagctgcggc accagccagc ctgtcgcccc ttcgccgctg gtgcctacgc tgaagatcgg
    11581 gaggagcggc aacgtcaggc cgaacagctg gagccgcccg ccctggaatt tcgctcgctt
    11641 cgttgccggg tcatagacga cccgcgcagc cgtgatcatc cagctcggac gcttgggaca
    11701 cccggcctcg ttcgtgaccg ggcaaggcga ataagcggca ttgtccagag tgacgatgtc
    11761 gcccgcacgg gttccgcgct gcgcggcgat ccgaccgccg ctttcgagca cgacgagcag
    11821 gttgctgaca attccgtcac gcaatgtgtc ggtgaggacg acattctcgc cgaggatttt
    11881 gtcgccctgg ggatcgacaa cgacgacatt gccctccgcc cgcacctcgc cggtcttgcg
    11941 attccaggtg attcggtcgg cggcgaggta attgccgtcg cgcgccatcc gcacttgccc
    12001 cgccgcggaa acgacgtcgt tctcgctgtc gtagattagc tcatcggcgg taaattcgac
    12061 tgcctcggct tcttgagtcg cagcgggcgc cgccggatcc gcaggctggg ctgctggagc
    12121 aacagccggc aagcccacaa gcggaagcgc cgtccaccag atcacccgtt tgcgcaaacg
    12181 ctcgccttcc gcccgcttta ccttgatcca agcgactatc gcaccttggg gccgccccgc
    12241 aatcgccttg gccgggaacg ggcccgcgcc gcaatcgtct cgtcgggcgg gctttgccat
    12301 cgccggttcg gcgtcctaag gcgcgcgaag cccaagcctc gacaatccag ggattcagac
    12361 tttgacgatc aagatcgatt tcgccgcctc ccgccccgat ggggattatg cactggttat
    12421 cccgtccgct gccaaggttt gcccggccgc ggaaacgctc gccgacaaga gcaaggtcga
    12481 agcggcgctt gagcgccagc ggttcgacgg cgacagcgga agcagcgccg aactattcat
    12541 cgacgatggc ggcacaactc ggcgattgct cgtcgtcggg accggcaagg actccgtccc
    12601 cgccgaagcg gcggagaagc tcggcggctc cgccgcggcc aagctcctga agtcgggcga
    12661 aactcacgct gtcatcgacg tcagcggcct cggctatgat gccgatgcgg cggcgcgcgt
    12721 cgctctcgcc gcggcgctgc gctcctggcg ttatgaccgc taccgcacca agctcaagga
    12781 caagcagaag ccgaccctga agacggtcac tgtcgtcggc ggcggcgagg gcgccgccga
    12841 tcgctggaag aacaggtggg agccggtggc cgaagggatc gatctgaccc gcggactggt
    12901 taccgagccg gccaacgtca tctatccgga aagcttcgtc gaccgctgcc gcgacctctc
    12961 caagctcggc atccagatgg acgtgctcga cgccgagcag atgaaggcgc ttggcatggg
    13021 cgctctcctc ggcgtcgcac aggggtcgat ccgggagccg cgcctgctgg tcctccgctg
    13081 gaacggcggc aagcaaggtg aagcaccgac ggcattcgtc ggcaagggcg tgaccttcga
    13141 caccggcggg atttcgatca agccggcgca gggcatggaa tcgatgaagt gggacatggg
    13201 cggggccgcc gccgtcgtcg gggcgatgaa ggcgctggcg ctgcgcaagg ccaagtccaa
    13261 catcgtcggc atctgcggcc tcgtcgagaa catgccgggc ggcaacgccc agcgccccgg
    13321 cgacgtggtg acgacgatgt ccggccagac tgtggaggtg atcaataccg acgccgaggg
    13381 ccggctcgtg cttgccgacg cgattaccta cgttcagcgc aagtacgagg cgaaaacgat
    13441 catcgacctc gcgaccctga ccggcgcaat tctagtcagc ctcggccacg agtttgccgg
    13501 cctgttttcg ccggacgatg agcttgccgg caagctgttg aaggcggctg agcaaagcgg
    13561 ggacaagctg tggcggatgc cactcgccga accgttcgac aggctcatcg attcgccgat
    13621 cgccgacgtc aagaacgtcg ggcctcgcga ggggggctcc atcaccgccg cccaattcat
    13681 caagcgcttc gtcgaaaacg gcaccacttg ggcccacctc gacatcgccg gaatggcgtg
    13741 gtcggacaag ccgtcgagca catacgacaa gggcgcgacc ggatacggtg tccggctgct
    13801 cgaccagttc gtggccgaca atctcgaggg ttgatccctc gaatgagagt cgatttctac
    13861 caactcggca cggtggcgct tgagcaggtg atcgcaaagc ttgctgaaaa gttgctgggc
    13921 gaggaggaac ggttgcttgt ggtggcggcc gatgatgcgc aagtcgcccg attggagcgg
    13981 gtcctgtggg agcacggagg cgcgacaagc ttcctgcccc acggaactgc aggcggaagc
    14041 gaagattcgc ggcagccggt actgctgtcg acgagccccg acgcggccaa ccgcgcccgc
    14101 aatcttctga tcgcggacgg tcattggcgc gaggcggcgc tggcctttca ccgcgccttc
    14161 tacgttttcg gtaccgacac gctcgaggag gcgcgcgcga cctggcgttc gcttggcggc
    14221 cgcgatggca tcgagcggca ttattgggcg aacgaggacg gccgctgggt cgaaaaggcg
    14281 gcagccgctc ggccagccgc gtaaacttcc ggctgccgtc gtgccagtcg gcgctcttcc
    14341 agcctcgttt cgtcgtaaac ccgacattcg gcgtttaccg gtggctcgcg caccccggcc
    14401 gggtgcgaca gtgaagtccg cataggccgg cacaccgttg ttcccaactc ccccgtcgga
    14461 gtgtcggccg ccctcttgct gtattgacac aataatacag cagctgtacc tctacgcccc
    14521 gaaaggggtg cactcatgta cagtcaaaac gacctcgacg acgcagtcgc tgcgggcgca
    14581 atgagcgccg agtccgcggc cgcgcttcgc aacttcatcg agacgcagcg ctccgcgccg
    14641 gcggtcgatg aagagcagtt ccggctgatt accggattca acgatatttt cgtttcgatc
    14701 gcttcgataa tcctgctcgt cgctgtcgcc tggatcggcc agtcgatcgg ccaatcgctc
    14761 ggaacatcgg tcgacgtgga cggtccctcg ttcctcgccc ccgcggcggt cggcgtgacc
    14821 gcatggtgtc tagcattgtt cttcaccgcc aagcggcgaa tggcgcttcc gtcgatccta
    14881 ttgctgctgg cattcgtcgg agcggtcttt gcgacggtcg ctttcgttgg ggcgcttgcg
    14941 gtcggcgaac cgccgaagga gcaggaggga ctgtatgtcg gagtcatcgc agccattgcc
    15001 ggtgcagttg ccgccggcgc ggcgtggctc cactggaagc gtttccgagt gccgatcacc
    15061 gtcgccgccg gagcggccgc ggttgcggcg atcgtggtcg ggctcctgat cgcggtcctc
    15121 ggcgaccccg agaattataa gaatgccgtg ctcggcgtcg tgctcctgct cggagtcggc
    15181 gttttcctct tcgcgatgcg gtgggattcg tcggatcccg gtcgcctaac acgccgttcc
    15241 gatgtcgcct tctggctgca tctcctcgcc gcgccgatga tcgtccaccc ggtttttacc
    15301 ctgctcgggc tcaacgacgg caacgcgacc atcggggagg gcctcgttgt cgtcctgctc
    15361 tacatcctga tggggttggc cgcgttggcg atcgaccgtc gcgcactgtt agtgtcggcg
    15421 ctcgcttatg tccttttcgc gctgcaggag ctgttcaagc agttcggtgc gatcgagctt
    15481 aacgtcgcac tgacggcgtt ggtgatcggc tcgtccctgc tgctcctgtc ggccttctgg
    15541 caccaggcgc gcgaggcggt ggtcaggccg ctccctgatg ggcttcgggc caagcttccg
    15601 ctgctgggcg attcaaggac ggtcagccaa ccagccgcat aagccgccgc tcgagcgggg
    15661 ccataacccc tgaaaggtca tggccacgtt tgagcaccag gccatgctcg ccaacgagcg
    15721 cgaacgctcc ttgcttcagc cgaagctcgg ggcgtttttc tatgcggacc tccggccgct
    15781 cggtgtgcct tcggaaagcg gcgaacactg ccaggtcggg gtggtgccca agcgcgtaat
    15841 cgcgccagtg tcccgccgcg accatccgcc cgtacaggtc catgatgcgc atcagctcac
    15901 gtcggtcgaa ggcggtgatc gggcgccggt cccttgggtg ggggaacggc gcaatcacgc
    15961 tcaagcgcgc ttgctcctca ccgcagcggc ctcgccggac tgcttcgtct tcacctcctc
    16021 gcgaagcgcg cggatctcgc gctccagctc gcacagccga gcgagcgtcg ggtcggcgat
    16081 ctcgttgcac ggggtgccgt agggcaggaa ttccgccggt tccgcagttt cgatgtctac
    16141 ggggatcggc tttgcgggaa ttccgatcac cgtcgccccg ggggcaacgt ccctggtgac
    16201 gaccgcgttg gcgccgaccc gcgctccttc gccgacctca agcgggccga gcacctgcgc
    16261 tccggagccg atgacgacat gatcgcagat ggtcgggtgt ctcttgccgg tcttcccctc
    16321 gtgcgggctg gtgccgccca gggtgacgtt ctggtagatg gtgacatcgt cgccgatctc
    16381 ggcggtttcg ccgatgacgg taaagccgtg gtcgatgaag aaccgctttc cgatcactgc
    16441 tccgggatgg atgtcgatcg cggtcaggaa acgcgcaaaa tgattgacgc agcgggcgag
    16501 gaaatagagc ccgccgccgt aaaaccagtg cgccactcgg tgaagggcaa gcgcccatgc
    16561 accgggatag atcagcacct cccagcgcga ccgagcggcg gggtcgcgcg cttcgacgga
    16621 gtcgagatac tcaatcagac ctgaaaacaa gcgccgatcc ttctgtgctg gttccaatct
    16681 atggacggtg cgggacgatt gccagagggg cagggcgagc gctggctcaa atcgttcaac
    16741 tctattatag cgcggcgcct gattggaatt atcgattaga atgactgttc accagccgac
    16801 gatcaagcag ctgcaatatc tcgtggcgct ccgtgagcac ggccatttcg gcaaggctgc
    16861 agaggcctgt ttcgtcaccc aatcgacctt gtcggctggg ctacgcgagt tggagagcct
    16921 gctcggagtc acgctcgttg agcggactcg gcgggtcgtc cggttcaccg cgcttggcga
    16981 aaaggtcgcc gacaaggcga tccgggtcat ccgcgagact gaggagctgg ccgagctggc
    17041 ccgggccgaa ggcaaacctc ttcacggcga gcttcggatg ggcgtgatcc cgacaatcgc
    17101 gccgttcctg ttaccggcga tgttgccgcg gcttcggcgc gagtggccga gcctcaaact
    17161 ctaccttcgc gaggaaacga gccaggcagc ctgcgaagcg ctccaccgcg gtcagctgga
    17221 ttgcgtactg ctggcgctgc ccttcgcctg cggtgacgtg gattccgcgc ctttgttcga
    17281 ggacaggctg tttgtcgctt ttcctcgcgg ggaggcgccg aggggcgcgg tcgtggatgt
    17341 cggtgcgatc gacgagcaga gaatgctgct cctcgaagat ggtcactgtc tcaaggacca
    17401 tgcgctctcg gcgtgcaacc ggcccgagat gcgggccaac gcggcgatga tgggcacgtc
    17461 gctgcacacg ctcgtccaga tggtcgacaa cgggctcggc ctcacgttcg tgccggaaat
    17521 ggcgatcgat gcagggatac tggacggtac gcgggtcgat gccaaaccgc tccggtcgag
    17581 ccaaaactac cggaaggtcg cgctaatctg gcgccggtcg agtccgcggg agagcgagtt
    17641 tcagctcctt gcgagcagct tgcgctcaat tatcgacgac ctggtcccgg cgtcgctgtc
    17701 ttcggctgaa actgcggccc gagaacagtc ggcgcctagg cgctgacctc cggatctaac
    17761 tcaccatctg cggtagccgg ctcggcgatg ccgatcggtt cagcgcggct cttctcctgc
    17821 ggcaggtcga agcggtcagc gttcatgacc ttggtccagg ccttgacgaa gtccttgacg
    17881 aacttctcct ggccgccttc ctcggcatag acctcgcact gggcgcgcag ctcggaattc
    17941 gagccgaaga tcaggtcggc gcgggtcgcc cgccaggtct cgccgccgct cgtccgatcg
    18001 gtggcgacgt attcctcgtc gttcgagccc tcgaccgagc tccacacgtt cgtcatgtcg
    18061 agcaggttga caaagaagtc gttggtgagc tggcccgacc gtttggtgaa gtgcccgtgg
    18121 ccgcgctcgc cgtggttggc gccgagcacg cgcaggccgc cgaccagcac gaccatctcc
    18181 ggcaccgaga ggccgagcag gctggcgcgg tcgagcatca tctcctcggt cttcaccgcg
    18241 agcttcttct tgccgacgta gttgcggaac gcgtcggctt cgggctccat caccgcgaag
    18301 ctgtcggcgt cggtctgctc ctcggtcgcg tcgccgcgcc cgccagtgaa cggcacatgg
    18361 gtggcgcccg ccttctcgag gcccaccacg ccgccgagca cgatcgcgtc ggccatgctc
    18421 atgctgccgc gcaggccgtc gagcgtggag agaaccttgg cgagcatctc aggctcgttg
    18481 acctcccagt ccttctgcgg cgcgaggcgg atgcgagcgc cgttggcgcc gccgcggtgg
    18541 tcggacttgc gataggtcga ggccgaggcc cacgcggtct tgattagctg gctgacggtg
    18601 aggccgctgt cgcggatctt ccgcttgacc gcctcgactt ccgcatcgga cggcatcgtg
    18661 ccggccggga tcgggtcttg ccagatcagg tcctcggccg ggacctcggg gcccaggtag
    18721 cgggccttgg gacccatgtc gcggtgggta agcttgaacc aggcgcgcgc gaaagcgtcc
    18781 ttgaaggcct cgtggtcgtt gcggaatttc tcgctgataa ctcggaactc gggatcgacc
    18841 ttgagcgcca tgtcggcggt cgtcatcatc gtcgggacct tcttgttagg gtcccacgcc
    18901 gccggggcca tgtcctcggg cttctggttg atcggctgcc actgctgcgc gccggcgggc
    18961 gacttcacca gctcgtattc atagtcgagc aggaggcgaa agtagttctc gctccactgt
    19021 gtcggggtgt tgacccacga gccttcgatt ccgctggtca cggtgtgctc gccgcagccg
    19081 ctttcgttct ggctgaccca gccgaaaccc tgcgcgacaa ggtcgccgcc cgcgggcgcc
    19141 ggaccgagct tcgagggatc gccgttgccg tgcgccttgc cgaaggtgtg gccgccggca
    19201 gtgagcgcga cggtctcctc gtggttcatc gccatgcgct cgaacgtcgc cttgatgtcc
    19261 cgcgccgact gcaatgggtc tgggttgccg cccgggcctt cgggattgac gtagatcagg
    19321 cccatctgga tcgcggcgag cgggccttcg agttcatgca ttccgtgctc aggcgagatt
    19381 cgggtctgga cgccttcgtt gacccacttg tcttcggaac cccagtaaat gtcgcgctcc
    19441 ggctcaaaga cgtcggcgcg gccgccgccg aagccgaaga ccggtccgcc catcgattcg
    19501 attgcgacgt tgccggcgag gatgaacagg tcggcccagc tgatgttctt gccgtacttc
    19561 tgcttgatcg gccacagcag acggcgcgcc ttgtcgaggt tgccgttgtc gggccaggaa
    19621 tcgagcgggg caaagcgctg ttggccactg ttagccccgc cgcgcccgtc ggcggtgcgg
    19681 taggtgccgg cggcgtgcca tgccatgcgg atgaagaacg ggccgtaatg gccgtagtcg
    19741 gccggccacc acggctggct gtcggtcatc agcgccttga ggtcggcctt gagcgcgttg
    19801 tagtcgagct ccttgaacgc ctcggcatag ttgaagtctt cgccgtgcgg gttggtcgga
    19861 ccgttgggat tgaggatttc ggtcgccagc atctcgggcc accaatcctt gttagtgcgg
    19921 ccgagcaggg cgcggacgcc accatcttca ccgttcccca tagggcatcc gcccatctcg
    19981 ccggtcttcg cgtccatgga attcgctcct gcaaattaga gtctcgatgg gggcctaggc
    20041 gtccagccaa ggcgacggaa acgattaaaa gcggtcagta agagctgaaa aatcgattag
    20101 cgcagccgca ttcgtgggac cttagtccat gtgcttgagg cctattctca gatagtcata
    20161 gccggtgacg agggtcagcg ccgccgccgc ccacaggctg gcgaggccga ccgtgtgaat
    20221 ccacggctgc gacggaagcg ctccgccgag gatcaacgcc ccgagcgcga ccagctggag
    20281 cgtcgtcttc cacttggcga gatggctgac cggcatcgac acgcgcagct cggcaaggaa
    20341 ttcgcgaagc cccgacacga tgatttcgcg aaggaggatt atgagagcgg ggatgatgtc
    20401 gaagtcctgc aggatcggcg gattgccgtc ggccttgcga gacgcgacca gcatcacgat
    20461 caccgcggcg atcatgatct tgtcggcgat cgggtcgagg aactggccga gcttcgagat
    20521 ctgcccctgc gcgcgggcga gatagccgtc gaaataatcg gttagcccga cgatgcagta
    20581 gagcacgaag gtcacagcat agtcgaacgg ccgcggctgc cacagcagga agacgaggat
    20641 cggaaccgcc aggattcgcg aaagggttag aaggttcggc agcgtcaaca taagcggggt
    20701 ccctgtattg aaactcgccg cccgacaaaa gaggcgctgc cgcagcgcgc ttgccgtccc
    20761 tgcacaaccc gctaagccac aatggcgatg caggattcgc tgcaccttct gaagacgcgg
    20821 cggttcctgc ccctgttcgc gacccagttc ctcggcgcgt tcaacgacaa cctgtaccgc
    20881 accgccgcgg tgatgctggc gatttacggc atctacggag acgaaaccca ggaagcgacg
    20941 ttcagcgcga tcgcggccgg gctgtttatc ctgccgttct tcctgctgtc ggccttgtcg
    21001 gggcagctgg cggacgagcg cgacaaggcg cgaatcatcc gcctcgtgaa gacggccgaa
    21061 atcctgatca tgatcgtcgg cgctatcggg ctcctcgtcc agaacgtccc gctgctcctc
    21121 gccgcgctgg gagcgatggg gatccactcg accttcttcg ggccgatcaa atacgcaatt
    21181 cttccgcagc atctcgaaaa aggggaggtg ctcggcggca ccggtctcgt cgaggcgggg
    21241 acctacatcg cgattctcgg agggacgatc ttgggcgggc ttctcgtggt ccgcggaagc
    21301 gacggccagt tccacgccat ttgggccgcg gtcgctgtcc tcgtcgttgc cgtcatcggc
    21361 aggatcgctg gcggccaggt tccaccggcg ccgcccgacc ccgctgcccc gccgtggaag
    21421 atggactggc acattgtccg ggcgtcgata acgttggtta acgcgaccct gcatgtgccg
    21481 aggctgttcc tcgccatcct gtcgatcagc ttcttctggg ccatgggaac ggtgctcgcc
    21541 gcgcaattcc cgccgctcgt caagaacagc ctttccgccg atcagtcggt cgcgaccttg
    21601 ttcctcgcca ttttctccgt cggagtggcg atcggctcaa tcgccgtgaa ccggctgctc
    21661 aagggaaagg tggcggcacg gttcgccccg gcgtcagcga tcgggatggg gctgttcgtc
    21721 ctcgacctgt tccgccgtgt tcattcgtgg ccccagctgc caggtgacca gttgaacggg
    21781 atcgctgcct tcctggcaat gccgaatggg ccttgggtcg tattcgacct gctcggagtc
    21841 gcgatcgccg gcggcatgtt c
//
LOCUS       DATAKH010000112         5935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_4692,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000112 DATAKH010000000
VERSION     DATAKH010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5935
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4692"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1791
                     /gene="acnA"
                     /locus_tag="VHN55_04765"
     CDS             <1..1791
                     /gene="acnA"
                     /locus_tag="VHN55_04765"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEX2803279.1"
                     /translation="YLSLEDQATIANMAPEYGATCGFFPIDERTCDYLRLTGRDEEQI
                     ELVRAYCQAQGLWRGEDSPEPFFTDTLELDMSSIEPSLAGPKRPQDRVLLSKVDEQFN
                     DDLKTKYDKHDDPRVAVDDLDHDLGNGDVVIAAITSCTNTSNPSVLIGAGLVARKARE
                     KGLQVKPWVKTSLAPGSQVVTDYLQASGLADDLNALGFDLVGYGCTTCIGNSGPLAEP
                     ISKAINENDLVAVSVLSGNRNFEGRVSPDCRANYLASPPLVVAYALKGTVRHDMVEEP
                     LGTSSSGEQVYLKDIWPSNEEIRTLIDAHVHSDMFRKRYADVYRGDDRWREIEVTGGE
                     TYSWPPESTYIRNPPYFTGMTMEAAAPKDIERARPLAVFGDSITTDHISPAGAIKPDS
                     PAGRYLLDRGVSRGEFNSYGSRRGNHEVMMRGTFANIRIRNQMLDDVEGGFTRYAPTG
                     ETMSMYDAAMLYKQDERPLVVIAGKEYGTGSSRDWAAKGTILLGVRAVIAESFERIHR
                     SNLLGMGVLPLQFKEGDTAESLGLTGEEKYSIAGVAELKPRQEVEVKVHHDDERESTF
                     IARCRIDTYNELEYFNAGGILQYVLRRLAA"
     gene            1791..2138
                     /locus_tag="VHN55_04770"
     CDS             1791..2138
                     /locus_tag="VHN55_04770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX2803280.1"
                     /translation="MALEGRCHCGACTIRLPRRPESVTQCNCSLCRATGFRGVYFSSD
                     ELEISGDFDSYVRADLDEVFLRNLRCSNCGMATHWEPLTEPPHERMGVNANMFDPAAL
                     EGVPVKHVDGASW"
     gene            2141..2416
                     /locus_tag="VHN55_04775"
     CDS             2141..2416
                     /locus_tag="VHN55_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803281.1"
                     /translation="MTAVEIAVEIVGWSGAILILLAYLLLSAGKVTGQSAAYQWMNVV
                     GAAGFIVNGWWHGAIPNTALNVVWMLIGGVALIRLARRKVPASSNPG"
     gene            complement(2367..3080)
                     /locus_tag="VHN55_04780"
     CDS             complement(2367..3080)
                     /locus_tag="VHN55_04780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HEX2803282.1"
                     /translation="MAATTLTDRSLVRLSGEDVREFLQGIVTSDVTGALPVWAGLLTP
                     QGKCLFDFIIWGDGDDVLLDCEADAADDLVKRLAIYRLRRKIEISIDASLAVHWSAEG
                     DGSIADPRLPALGCRWIGPAADPACDWLEHRLRLGVCEGRAELGDILWLECNAAELNG
                     VSFTKGCFVGQENTARMNWRSKVNRRLVVVAASEQGPRTRVLYEDLGLAVEHRRIDNL
                     EGAIIPDWMRPALSAAPAG"
     gene            3109..4137
                     /gene="pyrC"
                     /locus_tag="VHN55_04785"
     CDS             3109..4137
                     /gene="pyrC"
                     /locus_tag="VHN55_04785"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010238332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX2803283.1"
                     /translation="MQTLTIRRPDDWHVHLRDGEMLKLVAPFTARQFGRAIVMPNLIP
                     PIATAAAAEAYRERIVEATGPDFAPLMTCYLTDDSDPDEIAGGFEGRVWVAAKLYPAN
                     ATTNSAFGVTNIRKIYPALERMQRLGMVLCVHGEVTDPDVDIFDREAVFLDRVLDPLI
                     RDFPELRIVLEHITTAEAADLVETAGPNLAATITPHHLMINRNAMFDRGMRPHAYCLP
                     VAKREKHRQAIRRAATSGSPKFFLGTDSAPHSRRAKESGCGCAGIFNAPVALEAYATV
                     FEEEGALDRLEAFASEFGPAFYGLPLNEGAVTLERAVTEVPDSLGIDDIELVPFLAGS
                     ELAWSLKD"
     gene            complement(4127..4894)
                     /locus_tag="VHN55_04790"
     CDS             complement(4127..4894)
                     /locus_tag="VHN55_04790"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX2803284.1"
                     /translation="MNRTATDELDRLDEAFAGNRLLSTFPAEARALVEPFATLTELNA
                     GEVVHTRGSQVESCFFPFGSAMVSLVLDLSVDRSIEVASIGHEGAVGGIVSCGHAPAF
                     ARAEVLVSGPALRVAVKALEDAKMRSAHIRNLFCRFSDYLLAQVMQSLACNSYHSIEQ
                     RAARWLLTAQDRAGARIELTQETLAGLLGVQRTTVNAVIRILQDEGLVSTRRGAIRVI
                     DRAGLKKRACGCYDVLERHFAAIVGISGNGTAPSVSP"
     gene            complement(4957..>5935)
                     /locus_tag="VHN55_04795"
     CDS             complement(4957..>5935)
                     /locus_tag="VHN55_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX2803285.1"
                     /translation="GNARESARLCGRAGKPMKPIRIAIIGFGKIAADQHVPSIEGNPR
                     FALAASSSRSGKGPEPAFTDWRELVASVDGLEAVAITTPPKPRYAIARECLEAGLHVL
                     LEKPPCATLSEIEDLACIAEARQRSLFATWHARHNVAVEAAARALAGKRVESMEIRWH
                     EDVRKWHPGQQWIWEAGGFGVFDPGINALSIATAIFPGTLFVSGAKLSIPAGAETPVA
                     AEIELGSPAANGPLACSLDWRRSEGEEWTINVRTEDGCEVLLTDGGAKLSIDGVRQPA
                     NGPGEYPDIYNRFVQLIDERRSDVDVRPLRLVADCLLVGGRESVDTVPA"
BASE COUNT         1059 a         1950 c         1896 g         1030 t
ORIGIN      
        1 tatctctcgc tcgaagacca ggcgaccatc gccaacatgg cgcccgaata tggcgccacc
       61 tgcggcttct tcccgatcga cgagcggacg tgcgattacc tgcgcctgac cggccgggac
      121 gaagagcaga tcgagctcgt ccgagcttat tgccaggcgc agggcctgtg gcgcggcgag
      181 gactcgcccg agccgttttt caccgacacg ctcgagctcg acatgagctc gatcgagccg
      241 tcccttgccg ggccaaagcg gccgcaggac cgggtcctgc tcagcaaggt tgacgagcaa
      301 ttcaacgacg acctgaagac gaaatacgac aagcacgacg atccgcgagt ggcggtcgat
      361 gatctcgacc acgacctggg caatggcgac gtcgtcatcg ccgcgattac cagctgcacg
      421 aacacctcca acccgtcggt cctgatcggc gccggcctcg tcgcccgcaa ggcgcgcgag
      481 aaagggctac aggtcaagcc gtgggtgaaa accagccttg ccccgggaag ccaggtcgtc
      541 accgactatc ttcaggcgag cggtctcgcg gacgatctca acgcgctggg tttcgacctc
      601 gtcggctatg gctgcacgac atgcatcggc aactcaggac cgcttgcgga gccgatctcc
      661 aaggcgatca acgagaacga cctcgtcgcc gtcagcgtgc tgtccggcaa ccgcaatttc
      721 gaaggccggg tatcgcccga ttgcagggcc aattacctgg cttcgccgcc gctggtcgtc
      781 gcctacgccc tcaagggaac ggtgcgccac gatatggtag aagagccgtt gggcacctcg
      841 tcgagcgggg agcaggtgta cctgaaggac atctggccct ccaatgagga gatccggacg
      901 ctgatcgacg cgcacgtcca ttccgacatg ttccgcaagc gctatgccga cgtctaccgc
      961 ggcgacgatc gctggcgcga gatcgaggtg acgggcggcg agacctacag ctggccgccg
     1021 gaatcgacct acatccgaaa cccgccttat ttcaccggaa tgacaatgga ggcagcggcg
     1081 ccgaaggaca tcgagcgagc gcgtccgctt gcggtgttcg gggattcgat caccaccgat
     1141 cacatctcgc cagcgggcgc aatcaagccc gacagtcccg ccggacgcta tttgctcgac
     1201 cgcggcgtgt cgcgcggcga gttcaacagc tacggctcgc gccggggcaa ccatgaagtg
     1261 atgatgcgcg gcacgttcgc gaacatccga atccgcaacc agatgctcga cgatgtcgag
     1321 ggcggcttca cccgctacgc cccgaccgga gagacgatgt cgatgtacga cgcggcgatg
     1381 ctctacaagc aggatgagcg cccgctcgtc gtcatcgccg gcaaggaata tggcaccgga
     1441 agctcgcgcg attgggcggc caagggcacg atcctgctcg gcgtccgtgc cgtcatcgca
     1501 gagagcttcg agcggatcca ccggtcgaac ctgctcggca tgggagtcct tccgctgcag
     1561 ttcaaagagg gcgataccgc agaaagcctc ggcctcaccg gcgaagagaa atattcgatt
     1621 gccggggtgg ccgagctcaa gccgcggcag gaggtcgagg ttaaggtgca tcacgacgac
     1681 gagcgcgagt cgactttcat cgcccgctgc cggatcgata cctacaacga gctcgaatat
     1741 ttcaatgccg gcgggatcct ccagtacgtg cttcggaggc ttgcggccta gtggcgctgg
     1801 aaggccgctg ccactgcggt gcctgcacca tccggctgcc gaggaggccc gagagcgtca
     1861 cccagtgcaa ctgcagcctg tgccgggcga ccggatttcg aggcgtctat ttcagctccg
     1921 atgagctgga gatttccggc gatttcgaca gctacgtccg cgccgacctg gatgaggttt
     1981 tccttcgcaa cttgcgctgc agcaattgcg ggatggccac ccattgggag ccgctgaccg
     2041 agccgccgca cgagcggatg ggggtcaacg ccaacatgtt cgaccccgct gccctcgaag
     2101 gcgtgccggt caagcatgtc gatggagcga gctggtaagc atgaccgcgg tcgaaatcgc
     2161 ggtcgagatc gtcggctggt cgggagcgat cctgatcctg ctggcctatt tgcttttgtc
     2221 ggcaggcaag gtcaccggcc agtcagcagc ctatcaatgg atgaacgtcg tcggcgcggc
     2281 cggcttcatc gtcaacggct ggtggcacgg cgcaattccg aacacggccc ttaacgtcgt
     2341 ttggatgctg attggcggtg ttgcgcttat ccggctggcg cggcggaaag tgccggcctc
     2401 atccaatccg ggatgatcgc gccttcgaga ttgtcgattc ggcgatgctc gaccgccagg
     2461 ccaaggtcct cgtaaaggac ccgagtccgc gggccctgct cgctcgctgc gactaccacc
     2521 agccgccggt tgaccttcga acgccagttc atccgggccg tattctcctg cccgacgaag
     2581 caccctttgg tgaagctcac cccgttcagc tcggcggcat tgcattcgag ccagaggatg
     2641 tcgccgagtt cggcgcggcc ttcgcagacg ccgagtcgaa gccggtgctc gagccagtcg
     2701 catgcagggt cggcggcggg accaatccag cggcagccga gcgccggcag gcgcggatcg
     2761 gcgatgctgc cgtcgccttc cgccgaccaa tggaccgcaa gcgaggcgtc gattgaaatc
     2821 tcgatcttgc ggcgcagccg gtagatcgcc agccgcttga caaggtcgtc ggccgcgtcg
     2881 gcctcgcaat cgagcaggac gtcgtcaccg tcgccccaga tgatgaaatc gaacaggcac
     2941 ttgccttgcg gagtgagaag cccggcccag accggaagcg cgccggtgac gtcgctggtc
     3001 acgatcccct gcaggaactc gcgcacatcc tcgcccgaga gccggacgag cgaacggtcg
     3061 gtcagggtgg tcgcggccat gaccctcagt taaggagccg gcgtggcatt gcaaacgctc
     3121 accatccgcc gccccgacga ctggcacgtg catttgcgcg acggcgagat gctaaagctc
     3181 gtcgcgccgt tcacggcgcg gcagttcggg cgcgcgatcg tgatgcccaa cctgatcccc
     3241 ccgatcgcga ctgccgcggc ggccgaagcc tatcgcgagc ggatcgtcga ggcgacggga
     3301 cccgacttcg ccccgctgat gacctgctac ctcaccgacg acagcgatcc ggacgagatc
     3361 gccggcggct tcgaagggcg ggtgtgggtc gcagccaagc tgtatccggc caatgcgacg
     3421 accaactccg ctttcggggt cacgaacatc cgtaaaatct atccggcgct cgaacggatg
     3481 cagcgactag gcatggtgct ctgcgtccac ggcgaggtca ccgatccgga cgtggacatc
     3541 ttcgaccgcg aggcggtgtt tctcgatcgg gtgctcgacc cgctgatccg cgattttccc
     3601 gagctcagga tcgtgctcga gcatatcacc accgccgaag ccgccgattt ggtcgagacg
     3661 gccgggccca atctcgcggc gacgatcacc cctcaccacc tgatgatcaa tcgcaacgcg
     3721 atgttcgacc gaggaatgcg cccccatgct tattgcctgc cggtcgccaa gcgcgagaag
     3781 caccgacagg cgatccgccg cgctgcaact tcgggctcgc ccaaattctt cctcggcacc
     3841 gacagcgctc cccactcgcg ccgtgccaag gaatcgggat gcggctgcgc cggcatcttc
     3901 aacgcgccgg tggcgctgga agcctatgcg accgttttcg aggaagaagg cgcgctcgac
     3961 aggctggagg cgttcgcttc ggaattcggg cccgcgttct acggccttcc gctgaacgaa
     4021 ggcgccgtta ctctggagcg cgccgtcacc gaggttccgg attcgctcgg catcgacgat
     4081 atcgagctgg tgccgttcct tgccggctcg gagctggcgt ggagcctcaa ggactgaccg
     4141 acggcgctgt gccgtttccg cttattccga cgatggcggc aaaatgccgt tcgaggacgt
     4201 cgtagcatcc gcacgcgcgt ttcttgaggc cggcgcggtc gatgacccgg attgcaccgc
     4261 ggcgggtcga gaccagccct tcgtcctgca ggatgcggat gacggcattg acggtcgtgc
     4321 gctggactcc gagcaatccg gccagcgtct cctgggtaag ttcgatgcga gcgccggcgc
     4381 ggtcctgggc ggtcagcagc cacctcgctg cccgctgctc gatgctgtga tagctgttgc
     4441 acgcaagcga ctgcatcacc tgcgcgagga ggtagtcgga gaaacggcag aagaggttgc
     4501 ggatgtgtgc cgagcgcatc ttggcatcct ccagagcctt gaccgcgacc cgcagcgcgg
     4561 ggcctgagac cagcacctct gcgcgtgcga atgcaggcgc atggccgcag ctcacgattc
     4621 ctccgaccgc gccttcgtgg ccgatcgatg cgacctcgat agagcggtcc acggacaggt
     4681 cgaggaccag gctgaccatc gcgctcccga agggaaagaa gcacgattcc acctgcgagc
     4741 cgcgagtgtg aaccacttcg cccgcattca gctcagtgag ggtggcgaac ggttctacca
     4801 gcgcccgtgc ttcagccggg aaagtcgaca gcaggcgatt acccgcgaac gcttcgtcga
     4861 gtctgtcgag ctcgtcggtt gcggttcggt tcattccttc actcccgcga acaagagtcg
     4921 cggagcggca gatttgttcc cccgccgtaa cgcagcttag gccgggacgg tgtcgacgct
     4981 ttcacggccg ccgaccagaa ggcagtcggc gaccagccgc aacggccgga catcgacatc
     5041 gcttcttcgc tcgtcgatca gctgtacgaa gcggttgtag atgtcgggat attcgccagg
     5101 accgttcgcc ggctgccgga ccccgtcgat ggaaagcttt gctcccccat cggtcagaag
     5161 gacctcgcac ccgtcttcgg tccggacatt aattgtccac tcttcgcctt cgcttcggcg
     5221 ccagtcgagg ctgcaggcga gcggcccgtt cgcggccggg ctgccgagct cgatctccgc
     5281 cgcaaccggt gtttccgcgc ccgctggaat gctcagtttc gccccgctaa cgaacagcgt
     5341 gccggggaag atcgcggtcg ctatcgacag cgcgttgatt cccgggtcga acactccgaa
     5401 cccgccggcc tcccagatcc attgctgccc gggatgccac tttcgcacgt cctcgtgcca
     5461 gcggatttcc atcgattcga cccgcttgcc ggccagtgcc ctggcggccg cttctacagc
     5521 aacgttgtga cgcgcgtgcc aggtcgcgaa caggctgcgc tgccgcgctt cggcgatgca
     5581 ggcgagatcc tcgatttcgg acaaagtggc gcagggcggc ttttcgagca ggacgtgaag
     5641 gccggcctcg aggcactcgc gggcgatcgc gtagcgcggc ttcggcgggg tcgtgatcgc
     5701 cacggcctcg aggccatcga ccgacgcgac caactcgcgc caatcggtaa aggccggttc
     5761 cgggcctttt cccgaccggc tcgacgatgc cgccagcgcg aatcgggggt tgccctcgat
     5821 tgacgggacg tgctggtcgg cggcgatctt gccgaagccg atgatcgcga tccggatcgg
     5881 cttcatcggc tttccagcgc ggccacatag gcgcgcgctt tctcgagcgt ttcct
//
LOCUS       DATAKH010000113         8442 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_12484,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000113 DATAKH010000000
VERSION     DATAKH010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8442
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12484"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..1108
                     /locus_tag="VHN55_04800"
     CDS             35..1108
                     /locus_tag="VHN55_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX2803286.1"
                     /translation="MTKRIYLDHAATTPVIGPARDALARGLAEWANPNSPHWEGRRAR
                     ALLEGAREELKGALGWRHDVVFTSGASESVEIAARCALVPGRAHGATEHAIVGYAMGK
                     DSVVIPVDSNGLVDEAALDDVLSAGPALIAIQQVNNETGVIQPLDRLATKIREAGSLL
                     LADCAQGASKLPLPDADLIAICAHKLGGPPGIGALLVRDPATLSPCGGGQEKGYRRGT
                     QDVPGAMAFAAALSARPYEMGRLSGLRKRLEDGVRDSGGVIIAEDSPRAPTIGAVSLP
                     GATSAALLAQFDLAGMAVSAGSACSSGKAKASHVLAAMDVPEQVSAGFLRISFGPDTS
                     EEDIDSFLAEWGRIAERAATKAA"
     gene            1105..2223
                     /locus_tag="VHN55_04805"
     CDS             1105..2223
                     /locus_tag="VHN55_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019832979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HEX2803287.1"
                     /translation="MIYLDYQATTPLAPEAAAAMRPWLDDKFANPHSPSRWGREAAAA
                     IEVARKQVSAAIGARGGSLAFTGSATEALNWAIKGTLEKAQPGRNRIVTVQTEHAAVL
                     DTCEWLESRGVDVTYLPVAGDGLLDLDDVEAALDERVALVAVMLVNNEIGVIQPVEEI
                     ARLAHAAGALTLCDAVQALGRVEIPSGPDLVAVSAHKIHGPKGIGALWMLKSAEPAPL
                     IHGGGQEQGLRSGTLSPALCAGFGEAVKLASERRQADHEHIDGLWTAALAALGPQWTV
                     NGSIDRRYKGNLNIRREGLDAARLISDLRDICFSLGSACASGSGRPSHVLRAIGLDDR
                     QARSSIRLGFGRYTGEEELVDAVRRINEAAEAQERFAA"
     gene            2220..2555
                     /locus_tag="VHN55_04810"
     CDS             2220..2555
                     /locus_tag="VHN55_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2803288.1"
                     /translation="MTRVRFYKADGTLDKEVEAKPGQRLLDVAWAAKQPLEGACEGVM
                     ACSTCHVIVDKADFEKLPKASDEEEDMLDFAAHATRTSRLACQIFLTDEMDSLTVRIP
                     PSARNWLRG"
     gene            complement(2553..2650)
                     /gene="ffs"
                     /locus_tag="VHN55_04815"
     ncRNA           complement(2553..2650)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VHN55_04815"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            2723..4333
                     /locus_tag="VHN55_04820"
     CDS             2723..4333
                     /locus_tag="VHN55_04820"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017669342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEX2803289.1"
                     /translation="MTDESPALGLDLPEVAPPASPYRVLARKYRPQTFDQLIGQDAMV
                     KTLANAIERGRIAHAFLLTGVRGVGKTSTARLVAKALNCIGRDGQGQPTIEPCGQCEH
                     CKAIAEGRHIDVVEMDAASHTGVDDIREIIDAVRYASVSARYKIYIIDEVHMLSKNAF
                     NALLKTLEEPPEHVKFLFATTEVNKVPVTVLSRTQRFDLRRIDPEKLVAHFAEVAKAE
                     GVEVEPDALAMIARAAEGSARDGLSILDQAIAHGAGAVTADQVRDMLGLADRGRIRDL
                     LLLVLQGDSAQALAAMDEAHDLGMDPASILRGLMEALHSATRAKAGAQTEALLSAEQR
                     EFADSLAAKLSWGQIHRLWQMLLKGLSDVTVAPDPQEAATMAILRLIHSAELPDPASV
                     LERLSTGETTARAPARPQAAASSQAPADFAALVHSLEEDGKHQLAVQLHDQVGLVRYS
                     PPELVVKPLRPLGSDWTRELAAALKGITGTNWTVSIADDGAEPSLLEKEKMAEEKVRA
                     EVLQDPAVRSVMDAFPDAELESYSLKGA"
     gene            4346..4669
                     /locus_tag="VHN55_04825"
     CDS             4346..4669
                     /locus_tag="VHN55_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEX2803290.1"
                     /translation="MPNLDEIMKMAQDVQAEMQKAQENLDKIEVEGAAGGGLVTVRAS
                     AKGRIVSISIDDSLLQPSEKSMLEDLIAAAINDARTKADAAAAPELQKMTSGIPLPPG
                     FKLPF"
     gene            4737..6356
                     /locus_tag="VHN55_04830"
     CDS             4737..6356
                     /locus_tag="VHN55_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010403299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX2803291.1"
                     /translation="MSLGAMQDWPMRVTRLVDHAEREHGGREIVTAWADGSLTRTNWR
                     DVARDARKMAQALERLGIKPGDRVATLAMNHAHHLVAWYGTAGMGGILHTINPRLFDD
                     QLDYIANHAEDRLLLYDRAFQPIVDKMKPRWRTIEHYICMDPAEGEPGFRDWIDSEDG
                     KYSWVEGDEREPCGLCYTSGTTGNPKGVLYEHRSTMLHTFAQISPDIMGLSKQAVVLP
                     IVPMFHANAWGVPWAAPATGAKLVLSADYRPDVMCRLFREEKVTHSAGVPTVWLSMIE
                     HIERTGEELGDLKKVTIGGSAAPRAMIRWLRGRGIDVGHAWGMTETSPIGTCGARPPD
                     WDALSDDEQVEYIARQGFVPFGVELRIVDDDGNVLPRDGQASGRLQARGPWVVKRYFK
                     ADRDATDEEQWFDTGDVAVLHPDGTMQITDRSKDVIKSGGEWISSIELENAAVGCPGV
                     AEAAAIGIPHPKWDERPLLLVIRAPESDVTDAQIRDHLRGHVSSWWLPDAIEFVDELP
                     HTATGKLSKKTLRERYSDYRFANAEAMVGRD"
     gene            6445..8121
                     /gene="ettA"
                     /locus_tag="VHN55_04835"
     CDS             6445..8121
                     /gene="ettA"
                     /locus_tag="VHN55_04835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010545573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEX2803292.1"
                     /translation="MAAQYSFVMKGLTKAFPGQKPILNDIHLQFYPDAKIGIVGPNGS
                     GKSTLMKIMAGRDKEFAGEAWAGQGIDVGYLEQEPQLDPSKTVRENVMDGVRPVADML
                     ERFNAISAQMAAPPEDADFDALMAEMGELQEKIDAVDGWTLDNQLEIAMDALRCPPGD
                     SSVENLSGGEKRRVALTRLLLEKPKILLLDEPTNHLDAESVQWLEKHLVDYPGNVILV
                     THDRYFLDNVVNWILELDRGRYYVYEGNYSTYLEKKAKRLQQEEREEAGRQKAIADEL
                     EWIRRSPKARQAKSKARIRAFDELVKNQENRAPAKGEILIQMPERLGANVIEAKGLTK
                     AYGDKLLFEDLSFTLPPGGIVGIIGPNGAGKTTLFRIITGQEQPDSGKIDIGPTVHLG
                     YVDQSRDSLDPKHNVWEEISDGLDVFKIGKHEMNTRAYVGAFNFRGPDQQKKVGQLSG
                     GERNRVHLAKMLKQGGNVLLLDEPTNDLDVETLRALEDALENFAGCAVVISHDRFFLD
                     RLATHILAFEGDSRVEWFEGNFEAYEEDKLRRLGPEADRPHRMTYRKLTR"
     gene            8131..8418
                     /locus_tag="VHN55_04840"
     CDS             8131..8418
                     /locus_tag="VHN55_04840"
                     /inference="COORDINATES: protein motif:HMM:NF020496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1905 domain-containing protein"
                     /protein_id="HEX2803293.1"
                     /translation="MITVTGPLWLWSGEGGSWHFVTVPDEQASEIRAAAFAGPRGFGS
                     VRVEATINGVAWRTSVFPQKSGGYILPVKAEVRRRAAIAAGDEVTLTLTLL"
BASE COUNT         1571 a         2760 c         2777 g         1334 t
ORIGIN      
        1 gactccaact ggcaatcggc agatatccgc caaaatgact aagcgaattt atctcgacca
       61 tgccgcgacg acccccgtca tcggcccagc ccgcgacgcg ttggcgcgcg gcctcgccga
      121 atgggccaac ccgaacagcc cgcattggga aggtcggcgc gcccgggcgc tcctcgaagg
      181 cgcgcgggaa gagctgaagg gcgcgcttgg ctggcgccat gacgtcgtgt tcacgtctgg
      241 ggcgagcgaa agcgtcgaaa tcgcagctcg gtgcgcgctt gtgcccggac gtgcgcacgg
      301 cgccaccgag catgcgatcg tcggctatgc gatgggcaag gattccgtcg ttatccccgt
      361 cgacagcaac ggcttggtcg acgaagccgc gctcgacgac gtgctctcgg ctggaccggc
      421 cctcatcgcc atccagcagg tgaacaacga aaccggcgtc atccagcccc tcgatcggct
      481 ggcgacaaag atccgcgagg ccggaagctt gctcctcgcc gactgcgccc agggcgcgtc
      541 caagctgcct ctgcccgacg cggacctgat cgccatctgc gcgcacaagc tcggcggccc
      601 gcccggaatc ggtgcgctcc tcgttcgcga cccggcaacg cttagtccct gcggcggcgg
      661 gcaggagaaa ggctatagac ggggaacgca agacgtaccc ggcgcaatgg ccttcgctgc
      721 tgccctttcg gcgcggcctt acgaaatggg gcgtctgtcc gggcttcgga agcgtctcga
      781 ggatggggtt cgcgactcgg gcggcgtgat catcgccgag gactcgccga gagcgccgac
      841 aatcggcgcg gtctcgcttc ccggcgcgac cagcgccgcc ttgctggcgc agttcgacct
      901 cgccggaatg gcggtttccg cgggaagcgc ctgctcctcg gggaaggcga aggcgagcca
      961 tgtcctcgcc gcaatggacg tcccggagca ggtttcggcc ggattcctga gaatcagctt
     1021 cggtcccgac accagcgagg aggacatcga ctcgttcctc gccgaatggg ggcgaatcgc
     1081 cgagagggca gccacgaagg cggcatgatc tatctcgact accaggcgac cactccgctc
     1141 gctccagagg ccgccgcggc gatgcggccc tggctcgacg acaaattcgc caacccgcat
     1201 tcgccgtcgc gctggggccg cgaggccgcc gccgcgatcg aggttgcccg caagcaggtg
     1261 agcgcggcaa tcggtgcgcg gggcggctcg cttgctttca ccggcagcgc caccgaagca
     1321 ttgaactggg ctatcaaggg cacgctcgag aaggcgcagc ctggccgcaa ccggatcgtc
     1381 actgtccaga cggagcatgc ggctgtgctc gacacctgcg aatggctcga gagccgcggc
     1441 gtcgatgtca cctacctccc ggttgccggt gacggccttc tcgacttgga cgacgtcgaa
     1501 gcggcactcg acgagcgcgt ggcgcttgtc gcggtgatgc tggtcaataa cgaaatcggc
     1561 gtgatccagc ccgttgagga aatcgcacgg ctcgcccacg cggccggcgc actgacgctg
     1621 tgcgacgccg tccaggcgct cgggcgggtc gaaattccga gcgggccgga cctggtcgcg
     1681 gtttcagctc acaaaatcca tggccccaaa ggcattggcg cgctgtggat gctcaaatcc
     1741 gccgagcccg cccccctgat ccacggcggc gggcaggagc agggattgcg gtccggaacg
     1801 ctgtcgccgg cgctatgcgc aggtttcggt gaagcggtga agctggcgtc ggaacggcgc
     1861 caggccgacc acgagcacat cgatggcctg tggaccgccg ccctggctgc gctcgggccg
     1921 caatggaccg tcaacggcag catcgatcgg cggtacaaag gcaatctcaa catccgccgc
     1981 gaaggccttg atgctgcgcg cctgatttcc gacttgcgcg atatctgctt ctcgctcgga
     2041 agcgcctgcg ccagcggctc tggccgaccc agccatgtac tccgggcgat cggcctggac
     2101 gaccgacagg cgcgatcgtc tatccgcctc ggcttcggcc gctataccgg cgaggaggag
     2161 ctggtcgacg ccgtgcggcg gatcaacgag gccgcggaag cccaggagcg tttcgccgcg
     2221 tgacccgggt gcgcttctac aaggccgacg gaacgctcga caaggaagtc gaagccaagc
     2281 ccggccagcg gctgctcgac gttgcctggg cggcgaaaca gccgctcgaa ggcgcatgcg
     2341 agggggtgat ggcctgctcg acgtgccacg tcatcgtcga caaggccgat ttcgagaagc
     2401 ttcccaaggc gagcgacgag gaagaggaca tgctcgactt cgccgcccac gcgacgcgta
     2461 cgtcgcggct cgcctgccag attttcctga ccgacgagat ggacagcctg acggtgagaa
     2521 taccgccaag cgcgaggaac tggttgagag gctagggtgg gaaccggaac gacccgggac
     2581 gaaatcgttg tggctgcttc cttccggacc tgaccaggtt ggcgacagcc ccgtccgccc
     2641 ggctcccgag ggccatatgg ggacagtttc gcgcgcaggc aagcgctcgc aatgacgccg
     2701 ccgcgcgcct agaacagcgc taatgaccga cgaatcgcct gcacttggac tggacctgcc
     2761 cgaggtcgcg ccgcctgcct ctccctatcg agtcctcgcc cgcaaatacc gcccgcagac
     2821 gttcgaccag ctgatcgggc aggacgcgat ggtgaagacc ctcgccaacg cgatcgagcg
     2881 cgggcggatc gcgcatgctt tcctgctcac cggagtccgc ggcgtcggca agacctcgac
     2941 cgcccggctc gtcgccaagg cgctcaactg catcggccgc gacgggcagg gccagccgac
     3001 gatcgagccg tgcggccaat gcgagcattg caaggccatc gccgaaggcc ggcatatcga
     3061 tgtcgtcgag atggacgcgg catcgcacac cggtgtcgac gacattcgcg agatcatcga
     3121 cgcggtccgc tatgcgtcgg tttcggcccg ctacaagatt tatatcatcg acgaagtcca
     3181 catgctttca aagaacgcgt tcaatgcgtt gctgaagact cttgaggaac cgcctgagca
     3241 tgtgaaattc ctgttcgcga ccaccgaggt gaacaaggtc ccggtcacgg tgctgtctcg
     3301 gacccagcgc ttcgacctca ggcgaatcga tcccgaaaag ctcgtcgccc atttcgccga
     3361 agtggcaaaa gcggaaggcg tcgaggtcga gccggacgcg ttggcgatga tcgcccgagc
     3421 cgcggaaggc tccgcccgcg acggcctgtc gatcctcgac caggcgatcg cccacggcgc
     3481 cggcgctgtc accgccgacc aggtgcgcga catgctcggc ctcgccgacc gcggccggat
     3541 ccgagacctc ctgttgctgg tgctccaggg ggattcggcg caggcgctcg cggcaatgga
     3601 cgaggcgcac gatctcggaa tggacccggc ctcgatcctt cgcggactga tggaggcgct
     3661 ccattcggcg acccgcgcca aggccggggc ccagaccgaa gcgctgctgt cggcagagca
     3721 gcgcgaattc gccgattctc tcgccgcgaa actgtcctgg ggccagattc accggttgtg
     3781 gcagatgctc ctcaagggcc tttccgacgt cactgtcgcg cccgatccgc aggaagcggc
     3841 gacaatggcg attcttcggc tcattcactc tgccgagctt ccggacccgg cgagcgtcct
     3901 cgaacggctg tcgaccggcg agacgaccgc ccgcgccccc gccaggccgc aggccgcggc
     3961 gtcgtcgcag gctcccgccg atttcgcggc actggtccat tcgctcgaag aggacggcaa
     4021 gcatcagctc gccgtccagc tccacgacca ggtcgggctg gtgcgctatt cgccgcccga
     4081 gctcgtcgtg aagccgcttc gcccgctcgg ctccgactgg acgcgggagc ttgccgccgc
     4141 gctcaaaggg atcacgggca ccaactggac cgtttccatt gccgacgatg gcgccgagcc
     4201 gtcgctactg gagaaagaga agatggccga ggagaaagtc cgggcggaag tgctccagga
     4261 cccggccgtg cgctcggtga tggatgcttt tccagacgcc gagcttgaat cctattccct
     4321 gaaaggtgct tgagacatgc ccgagatgcc gaacctcgat gaaatcatga aaatggccca
     4381 ggacgtccag gccgagatgc agaaggcgca ggaaaatctc gacaagatcg aggtcgaagg
     4441 cgctgcgggc ggggggctgg tgacggtccg ggcgtcggcc aagggccgga tcgtctcgat
     4501 ctcgatcgac gacagcctgc tgcagccgtc cgaaaagtcg atgctcgagg acctgattgc
     4561 cgccgcgatc aacgatgcca ggaccaaagc cgacgccgcg gctgctcccg agctccagaa
     4621 gatgaccagc ggaatcccgc tgccgccggg cttcaagctg ccgttttaaa ccctgcggct
     4681 tgcctgccgc cgcttttagg gcatgatgct tgccttctgg cggaagggaa tgccggatga
     4741 gcctgggtgc aatgcaggac tggccgatgc gcgtgactcg gctggtcgac catgccgaac
     4801 gcgagcatgg cggccgcgag atcgtcaccg catgggccga cgggtcgctc acccggacga
     4861 actggcgaga tgtcgcccgc gatgcccgca agatggcgca ggcgctcgag cgcctgggaa
     4921 taaagcccgg ggaccgggtc gcgacgctgg cgatgaacca cgcccatcac ctggtcgcct
     4981 ggtacgggac ggccgggatg ggcggcatcc tccacacaat caacccgcgc ctgttcgacg
     5041 accagctcga ctatatcgcc aaccacgccg aggaccggct gctcctctac gatcgcgcgt
     5101 tccagccgat cgtggacaag atgaagccca ggtggagaac gatcgagcat tatatctgca
     5161 tggacccggc ggagggcgaa ccgggatttc gcgactggat cgattccgag gacgggaagt
     5221 acagctgggt cgaaggcgac gagcgcgagc cgtgcggcct ttgctatacc agcggcacga
     5281 ccggcaaccc caagggcgtc ctctacgagc atcgctcgac gatgctgcac accttcgccc
     5341 agatcagccc cgacatcatg gggctgtcga agcaggcggt cgtgcttccg atcgtcccga
     5401 tgttccatgc caatgcctgg ggcgttccgt gggccgcccc ggcgactggc gccaagctgg
     5461 tcctgtctgc cgactaccgc ccggacgtga tgtgcaggct gttccgcgag gaaaaggtaa
     5521 cccactcggc aggggtgccg acggtctggc tgtcgatgat cgagcatatc gagcggaccg
     5581 gcgaggagct cggcgacctc aagaaggtca cgatcggcgg atcggcggcc ccgcgagcga
     5641 tgattcgctg gcttcgcggg cgcgggatcg acgtcggtca cgcctgggga atgaccgaga
     5701 cttcgccgat cggcacctgc ggcgcccgtc cgccggattg ggacgcccta agcgacgacg
     5761 agcaggtcga atatatcgcc cgccagggct tcgtcccgtt cggggtcgag cttcgaattg
     5821 tcgacgacga cggcaacgtc ctgccgcgcg acggccaggc gtcaggtcgg ctgcaggcgc
     5881 gggggccctg ggtcgtgaag cgctatttca aggccgatcg cgacgcgacg gatgaagagc
     5941 agtggttcga caccggcgac gtcgcggtgc ttcatcccga tgggacgatg cagatcactg
     6001 accgttcgaa ggacgtcatc aagtcgggcg gggagtggat cagctcgata gagctcgaaa
     6061 atgcggctgt cggctgtcct ggcgtcgcag aggccgcggc gatcggaatc ccgcatccca
     6121 agtgggacga gcggccgctt cttctcgtca tccgcgcgcc cgagagcgat gttacggacg
     6181 cgcagatccg cgatcatctg cgtggccacg tgtcgagctg gtggcttccg gacgcgatcg
     6241 agttcgtcga cgagcttccg cacaccgcta ccggcaagct ctcgaagaag accctgcgcg
     6301 agcggtatag cgactaccgc ttcgccaacg ccgaggcgat ggtcggaagg gactagcctc
     6361 acgggcacac gggctggaat tcccgctcag gctccactac ctgcccacca actttccagc
     6421 actcccgaag gattcagcgc cgacatggcc gcccagtaca gctttgtgat gaaaggccta
     6481 accaaggcct tcccgggcca gaagcccatc ctcaacgaca tccacctgca attctatccc
     6541 gacgcgaaga ttggaatcgt cggcccgaac ggttccggca agtcgaccct gatgaagatc
     6601 atggccggcc gcgacaagga attcgccggt gaggcctggg cggggcaggg gatcgatgtc
     6661 ggctatctcg agcaggaacc gcagctcgac ccgtcgaaga cggtgcgcga gaacgtgatg
     6721 gacggggttc ggcccgttgc cgacatgctc gagcggttca acgcgatcag cgcccaaatg
     6781 gctgcgcctc ccgaggatgc cgatttcgac gcgctgatgg cggagatggg cgagcttcag
     6841 gaaaagatcg acgccgtcga cggctggacc ctcgataacc agctcgagat cgcgatggac
     6901 gcgcttcgct gcccgccggg ggattcgtcg gtcgaaaacc tctcaggcgg cgagaagcgg
     6961 cgggtcgcgc tgacgcggct gctgctggag aagcccaaga tcctgcttct cgacgagccg
     7021 accaaccatc tcgatgccga aagcgtgcag tggctggaga agcacctggt cgattatccg
     7081 ggcaacgtga tcctcgtcac ccacgaccgc tatttcctcg acaatgtcgt caactggatc
     7141 ctcgagctcg atcgcgggcg ttattacgtg tacgaaggaa actattctac ctatctggaa
     7201 aagaaggcaa aacggcttca gcaggaagaa cgcgaagagg ccggccggca gaaggcgatc
     7261 gccgatgagc tggagtggat ccggcgctcg cccaaggccc ggcaggccaa gtccaaggcg
     7321 cggatccggg cgttcgacga gctggtgaag aaccaggaga accgcgctcc ggcaaagggc
     7381 gaaatcctga tccagatgcc cgagcggctt ggcgccaatg tcatcgaggc gaagggcctg
     7441 accaaggctt atggcgacaa gctccttttc gaggacctgt cgttcaccct gcctccgggc
     7501 gggatcgtcg ggatcatcgg ccccaatggc gcgggtaaga ccaccctgtt ccgaatcatt
     7561 accggccagg agcagccgga ttcgggcaag atcgacatcg gcccgacggt ccacctcggc
     7621 tatgtcgacc agagccgcga ctcgctcgat ccgaagcaca acgtctggga ggagatctcc
     7681 gacgggctcg atgtgttcaa gataggcaag cacgagatga acacccgcgc ctatgtcggc
     7741 gcgttcaact tccgcgggcc cgaccagcag aagaaggtcg ggcagctctc gggcggcgag
     7801 cgcaaccggg tccaccttgc caagatgctc aagcagggcg gcaacgtcct cctgctcgac
     7861 gagcccacca acgacctcga cgtcgagacc cttcgcgcgc tcgaggacgc actcgagaat
     7921 tttgccggct gcgccgtcgt catcagccac gatcgcttct tcctcgaccg cctcgcgacg
     7981 cacatcctcg ccttcgaggg cgacagccgg gtcgaatggt tcgagggcaa tttcgaagcc
     8041 tatgaggaag acaaattgcg ccgtctgggc cccgaagcgg accgcccgca ccggatgacg
     8101 taccggaagt tgacgcgcta ggaagcgcgt atgatcaccg tcaccggtcc tctctggctc
     8161 tggtccggcg agggcgggag ctggcacttc gtgaccgtgc cggatgaaca ggcctcagaa
     8221 atccgcgctg cagctttcgc cgggccgcgc gggttcggct cggtcagggt ggaggcgacg
     8281 atcaacggcg tcgcctggcg cacgtccgta tttccgcaga agagtggggg ctacatcctg
     8341 ccggtcaagg ccgaggtccg ccgccgcgcc gcaattgccg ccggcgacga agtgaccctc
     8401 acgctcacgc ttctctgacc cggccgaaat gctggcaaaa tt
//
LOCUS       DATAKH010000114        18336 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_37284,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000114 DATAKH010000000
VERSION     DATAKH010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 18336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18336
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37284"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /locus_tag="VHN55_04845"
     CDS             <1..898
                     /locus_tag="VHN55_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009821586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX2803294.1"
                     /translation="RVRAIGDDAKLMLGKTPGNVETIRPLRSGVIADLDVAEEMIKHF
                     IRKAHGGKSRLSRGPEVVICIPSGATPVERRAIRQAVSNAGADRVSLLEEPMAAAIGA
                     GLPVSDPVGSMVVDIGGGTTEVGVISLQGLAYCCSERVGGDRMDEAIISYVRRNYNLM
                     IGEGTAERVKLEIGTARAPSDGTGRTTYVRGRDVSRGVPSEISLNQAQIAEALDEPVN
                     RIVAVVRSALENTQPELAADVIDYGITMTGGGSLLRDIDGVLADETGLPVRIAEDALT
                     CVARGAGETLEDRLYRGALMAA"
     gene            complement(908..1354)
                     /locus_tag="VHN55_04850"
     CDS             complement(908..1354)
                     /locus_tag="VHN55_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010186402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803295.1"
                     /translation="MTEFLPRLFHSDAEIEHLGEGLLARTLPREEWTHEAHLAATTYL
                     LLKRPDVDLDKELPGIIRRYNESVGGVNSDSEGYHETITRVFLRGVRIFLAEADLEEP
                     LYELVNELLLSPMGRRDWPLRFYSPQRLFSVEARKQFVRPDIGSIP"
     gene            complement(1395..3011)
                     /locus_tag="VHN55_04855"
     CDS             complement(1395..3011)
                     /locus_tag="VHN55_04855"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase"
                     /protein_id="HEX2803296.1"
                     /translation="MAERVASHGLDAQGIVTPAKLHWNLTTAPLVEFAAQREEGLLAK
                     DGPLVVKTGKHTGRSAQDKFTVRDELTDSVIWWNKGNKPMEPEAFDRLHEDFLAALGE
                     KDTLFVQDLFGGSQPEHRVRVRVINELAWHSLFIRTMLVRPAVDELVDFVPEFTIIDL
                     PSFRANPERHGCRSETVIAVNFTKRLILIGGTSYAGEMKKSVFGLLNFLLPPQGIMPM
                     HCSANIGPDGDTAIFFGLSGTGKTTLSADPNRTLIGDDEHGWSDTAVFNFEGGCYAKM
                     IRLSAEAEPEIFATTKRFGTVLENVVIDPVTRELDLDDPTLAENSRGAYPIDYIPNSS
                     EKNMGPVPKNVVMLTADAFGVLPPISKLTPDQAMYHFLSGYTAKVAGTEIGVTEPEAT
                     FSTCFGAPFMPRHPSVYGNLLKERIAKGGVDCWLVNTGWTGGKYGTGRRMPIQATRAL
                     LNAALDGSLKNAEFRKDPNFGFDVPVSVPGVDDNILDPRATWDDPEEYDRTAAKLVDL
                     FVENFAQFADQVDEGVRQAAPSAAQPQPAE"
     gene            3177..3884
                     /locus_tag="VHN55_04860"
     CDS             3177..3884
                     /locus_tag="VHN55_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2803297.1"
                     /translation="MSHVIALVDDDRNILTSVSIALQSEGFITRVYTDGASALKAFAD
                     NPPDVGVFDIKMPQMDGMELLRRLREFSAMPVIFLTSKDDELDEALGLAMGADDYISK
                     PFSQRLLLARIRAILRRQDFARNEAVSAPEAEPELIERGRLSMDPARHKVKWDGKDVT
                     LTVTEFLILEALAQRPGVVKNRNQLLDVAYQEDVYVDDRTIDSHIKRIRRKFRAADPK
                     FDAIETLYGVGYRFEDQ"
     gene            3853..5427
                     /locus_tag="VHN55_04865"
     CDS             3853..5427
                     /locus_tag="VHN55_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stimulus-sensing domain-containing protein"
                     /protein_id="HEX2803298.1"
                     /translation="MASGTGLKTSRRKRHPARPWTARWTLTWRILAVNLLTVLILALG
                     VFYLDAFRNKLSKERIHRTEREAQITAIVARSLPPERRALALAAVGKSTRSRIRLYDP
                     DGRLVADSWRVTGATYRLRDPAEESWMKDAARALDRGFNFLVGAEYAPAFIEPAEDRI
                     TAWPEAYQAQTKNAVTSKVRTAPDLTPVLSAAAPVDGGALLVTSNERGLIKTMRSQRA
                     ILAITMSVAILLSVLLSLFLARTIVRPLRRIALAAHRVRLGRAREVRVPRLPSRRDEI
                     GLLARSVSDMSQSLRERIDNIEAFAADVTHELKNPLASLRSALEGLETVKDDALRSRL
                     MNVARTDVVRLDRLISDISEAARTDAELARARFEPVDLGSLVEQLVNSWETRREKGDA
                     RLAFARPRKASTQVFGDPGRLARAIDNVLDNAVSFSPAGGLVEIAASRVGNQVRIRID
                     DEGPGVPPDAREAIFNRFHSIRPEGEHFGRHSGLGLAIAKAIVEGHDGEISVYDRDDA
                     PSGARFIISLPAVEQQ"
     gene            5424..5870
                     /locus_tag="VHN55_04870"
     CDS             5424..5870
                     /locus_tag="VHN55_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HEX2803299.1"
                     /translation="MSSVRRLSSETVHATTVALDGRSVLITGPSGAGKSDLALRLLDR
                     GFSLVSDDQTIVRRDGERLVASAPPQIAGKLEVRGIGIVEMDTAADVPVALLVELRSD
                     IQRLPDDSRERQLLGVPLPLVSIDAAAASAPAKVELALDRLGLTAR"
     gene            5867..6796
                     /gene="rapZ"
                     /locus_tag="VHN55_04875"
     CDS             5867..6796
                     /gene="rapZ"
                     /locus_tag="VHN55_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEX2803300.1"
                     /translation="MSATQRKPRLLLVTGMSGAGKSTALDALEDMGWDTADNLPADLL
                     AGFVHGSDQCRTVPVAIGMDVRSRGFDPHTLPKLISEIEGVEPAILFLDCSSADLMRR
                     FDKTRRRHPLAPDRPAEDGIARERTMLAPVRSAADIVIDTTDLAPAELAEELRRRFKT
                     EREPVLTLISFGFGHGISRTADLVFDMRFLANPHWIDELRDLTGNDRPVRDYVARDPA
                     WTESMDRIESLLTDWIPRYWAAGKSYLTIAFGCTGGRHRSVTAAVEMAGRLQAAGFSP
                     NIRHRDLASTPNDRIEDKAGSAAASESGSELNE"
     gene            6793..7200
                     /locus_tag="VHN55_04880"
     CDS             6793..7200
                     /locus_tag="VHN55_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX2803301.1"
                     /translation="MIGMVLVTHGRLAAEFITAMEHVVGPQQAVDAVCIGPDDDMEER
                     RKDIAAAIKRVDQGKGVIILTDLFGGTPSNLAISLMKTENIEVIAGVNLPMLIRLEGA
                     RKVMGVHSAVAAAREAGRKYISVASEILGEAAA"
     gene            7197..7478
                     /locus_tag="VHN55_04885"
     CDS             7197..7478
                     /locus_tag="VHN55_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020818371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEX2803302.1"
                     /translation="MSATSREVRIVNRRGLHARASAQFVNMACELPATIEVEKDGNRV
                     CGTSIMGLMMLGAAMGDSIVIHAEGDGAEDALEKLLQLVETGFGEEAGG"
     gene            7478..8275
                     /locus_tag="VHN55_04890"
     CDS             7478..8275
                     /locus_tag="VHN55_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010546172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX2803303.1"
                     /translation="MPRQVTAFSNATVKRLRSLRDKKARRAERMFLAEGLRIIAEARD
                     SGRLPEIIAFSAEGAKHPLAAEIIAATEANGGEAIETTADILGKMSGKDNPQMLLGAY
                     PQPETRLDLIDRSTAPIWIVAQALRDPGNIGTILRTGDAVGAGGLVLVDDCADPFSVE
                     AVRASMGAVFTQQIATASWPDFLAWLRSAQSQLVGTSLKASADYLEASYEAPCFLLIG
                     NEQQGLPSDYERECDLLVKIPMAGRADSLNAAVAAAVMAFAVKASWR"
     gene            8311..8649
                     /locus_tag="VHN55_04895"
     CDS             8311..8649
                     /locus_tag="VHN55_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803304.1"
                     /translation="MDKRLALLIAPAFLGGCLPHPPPPPAPYHAVGQGSVWNLIIDDK
                     NVTFIASGKQPIVEPKPAVIIGIAGEIYQAKRINVNIVHGHCAANGRDFPDRVQVYVD
                     DVRHEGCGGL"
     gene            8662..9075
                     /locus_tag="VHN55_04900"
     CDS             8662..9075
                     /locus_tag="VHN55_04900"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEX2803305.1"
                     /translation="MLRIPMATALFVAAALTSCAAPPPPPIAELSGTSWRIVSVNGRQ
                     TPSAGDYSMRFEANGGFGARFGCNSMGGSYRLVGGTLTVSNVNQTLMGCPEPAASFES
                     QGAAILQQPMQVSFTSNERMGLNNAAGSIALDPVS"
     gene            complement(9079..10482)
                     /gene="rmuC"
                     /locus_tag="VHN55_04905"
     CDS             complement(9079..10482)
                     /gene="rmuC"
                     /locus_tag="VHN55_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEX2803306.1"
                     /translation="MSMDWGVIAAVVAALAVGALIGWLYAGRESAAAKQTAQTLRLQL
                     DEVVKERDQVRASHEASSRELAALQADARNFEQRMKDLAQSRDSLVTQFREIGDQLLQ
                     KAHKDFLEKAGVQLSEADKASQAKLQTLLQPVELTLKQYQAKLDAIEKERTHSYGELR
                     GLMGELRKDQGQVRDETRNLVNALRSSPKARGRWGEQSLRNVLEQAGLSPYADFQTEV
                     TVDGDDGKLRPDVIVNLPGGRTLVIDAKCSLNAYLDACDEVDDDKRKSCLESHLASIR
                     NHAQQLGSKSYWAQFGDSADYVVMYIPGEHFLTAALELDHGLWDWANERKVLLATPTN
                     LVAIARTVASIWNQEKLAAEAGKIAELGRELHSRLATMAEHVASVGTNLGRMNNAYNK
                     MVGSLESQVFTQARRFEDLGAGSAKEIPPPPMVEASPRPLTKLPVKDGEPVVVSIDDP
                     LSPRLEKADADADADED"
     gene            10589..10987
                     /locus_tag="VHN55_04910"
     CDS             10589..10987
                     /locus_tag="VHN55_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006950732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HEX2803307.1"
                     /translation="MSIRKMIALHPDVQGHVNQPLGDAAHHLMYCARMCVSCADACVA
                     ESMDMTQCIRACLDCADVCEATGKLAVRRAGSNEAVLKEMLEVCARVCDACAAECEKH
                     DHEHCKLCAQMCRECANDCRAAAESITPES"
     gene            10990..11451
                     /locus_tag="VHN55_04915"
     CDS             10990..11451
                     /locus_tag="VHN55_04915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803308.1"
                     /translation="MRNWLAAAALVALAGCDNSVPTGNEPNGPIITVEPDDNGAADGA
                     PADAAGAGELPAAGPIPRFVGKWAADEKSCQSLAWQFTATTLRTPAGSSCSFNRISEV
                     PGGYDVDATCTAEGPPTDDVLEIRFAESAKAMLFESETVADSGLVFCGRDV"
     gene            complement(11459..11998)
                     /gene="def"
                     /locus_tag="VHN55_04920"
     CDS             complement(11459..11998)
                     /gene="def"
                     /locus_tag="VHN55_04920"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX2803309.1"
                     /translation="MAIRPIVEVPDPLLRQISAPVEAVDDEVRALIADMFETMYAAPG
                     IGLAAIQVGVPKRILVIDLQEPAEEGGEPVKDPRIFINPEILQSSDQEVPYTEGCLSV
                     PDQYADVDRPDRIRARWLDENGDRHEEDIEGLLATCLQHEMDHLEGILFIDHLSRLKR
                     EMILKKLAKQRKEQEKRAA"
     gene            complement(12049..12654)
                     /locus_tag="VHN55_04925"
     CDS             complement(12049..12654)
                     /locus_tag="VHN55_04925"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017671160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX2803310.1"
                     /translation="MTALPDWQHLAIYAVGIAVIVVILQRLPYVGRIFRFLLSFAILA
                     FAVFLVLQQAPYQPTLARFTQQLGLDNQTVEGKELRVRMSPDGHFWVNATINGVKRRM
                     LIDSGATVTAISQETVRAAGVDTGMGVAPVILRTANGATPAQTGTIEELRVGNILARD
                     IKVVSAPGLGLDVIGMNFLSELQSWRVEDRTLVLVPHHPQN"
     gene            complement(12651..13247)
                     /gene="recR"
                     /locus_tag="VHN55_04930"
     CDS             complement(12651..13247)
                     /gene="recR"
                     /locus_tag="VHN55_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020817869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEX2803311.1"
                     /translation="MASQEIETLANALARLPGLGPRSARRAVLHLMKKRETTLEPLVA
                     ALQKVADTLSTCSTCGNVDTSDPCGICRDPRRDDRSLCVVEEVADLWALDRSRLFPGR
                     YHVLGGRLSALEGVRPDDLTIDKLVRRVAKGGIDEVVLAMNATLEGQTTAHYLAERLE
                     TYPVRLTQLAHGLPVGGELDYLDEGTLAQALRARRPLG"
     gene            13296..14195
                     /gene="fmt"
                     /locus_tag="VHN55_04935"
     CDS             13296..14195
                     /gene="fmt"
                     /locus_tag="VHN55_04935"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEX2803312.1"
                     /translation="MRIVFMGSPDFAVPSLDALAAAGHELICAYTQPARPAGRGKGEQ
                     KTAVNKRAEELGVEVRCPRTLKGPEEQARFAALDADLAVVAAYGLILPKPVLEAPKAG
                     CINVHASLLPRWRGAAPIQRAILAGDEVTGVTIMRMAEGLDTGPMLLKRETEVDSKTA
                     GELTDELASLGAQALVEWLDNPAPPVPQPDEGVTYASKIDKAEARIDWSRTASEIERQ
                     VRAFAPSPGAWFDANGERVKLLEAQIGDASGKAGEVLDDCLNVAAGEGYVRPLKVQRA
                     GRGVMTAGELLRGFPIPKGTILK"
     gene            14192..14932
                     /gene="truA"
                     /locus_tag="VHN55_04940"
     CDS             14192..14932
                     /gene="truA"
                     /locus_tag="VHN55_04940"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEX2803313.1"
                     /translation="MTRWRLTIEYDGGPFMGWQRQDHGPSVQQAIEEALARMTGELPT
                     VHAAGRTDAGVHALAMSAHVDIEKTLTQHRLREGVNALLRPAPISVLSAEHAPSDWHA
                     RFSCIGRRYLYRILNRRAPPALDLGRVWHVAVPLDEDAMAEGAAMLVGRHDFTTFRSA
                     HCKSDSPVKTLDRLEVLRVGDEIRIEASARSFLHHQVRSMVGCLALVGRGQWKPQDIG
                     RALEARDRSALGFNAPPQGLHFVEALYP"
     gene            complement(14929..15483)
                     /locus_tag="VHN55_04945"
     CDS             complement(14929..15483)
                     /locus_tag="VHN55_04945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803314.1"
                     /translation="MSNWTRTVVIRSAGVLIMLLALGSALLPMASGFSARVVIGFLLT
                     AAGAIELASVFARRGHHITAGIAAAASLIAGLRLALDPNANFPTILNVVILWLVVRSA
                     ALFISSRHSPRPLCTWVYLAAGIDLLLAVLLLAGLPVAVLVYGLFGQTSEILATFAWV
                     FAASFVAAGWLLVAAAPLQAVETD"
     gene            15644..16264
                     /locus_tag="VHN55_04950"
     CDS             15644..16264
                     /locus_tag="VHN55_04950"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2803315.1"
                     /translation="MEELPIETTIYSMSPRPPEEDRRTDERHLTLFRVGTLVLGDRRE
                     LCLVKNISAGGVSIRAYCSLEPDTVLSIELKESQPVAGQVTWVRGSDAGITFDERVDV
                     IDLLTSSVDGPRPRMPRIEVECVCFVREGAIVHRASLQNISQGGVSVEAPNPLSVGGE
                     VTVSLPGLSPQAATVRWKHGSRYGISFNSVLSLAGLVKWLHERGNG"
     gene            complement(16291..16710)
                     /locus_tag="VHN55_04955"
     CDS             complement(16291..16710)
                     /locus_tag="VHN55_04955"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2803316.1"
                     /translation="MDHSLQNQNRRNRRSNVMLKATLEAPGASLPVVLRNLSENGALV
                     QGEELPLPGTRVLFHREGLSVPSRVAWAHCNHAGLEFDYPLFPREVLRHVPTGERKPP
                     PEFVKRPGFGARPLTSSERRLIEAWAIDPSVHDRPGL"
     gene            complement(16747..17400)
                     /locus_tag="VHN55_04960"
     CDS             complement(16747..17400)
                     /locus_tag="VHN55_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF938 domain-containing protein"
                     /protein_id="HEX2803317.1"
                     /translation="MNDDRRFYETPAAAGQRSAPAALRNREPIADVLAEWLPDAGLVL
                     EVASGTGEHAVHFARRFPDRDWQPSDTHPEALASIRAWRQQSALANLREPIELDASAP
                     DWPIGRADAVLNINMVHISPWSAAIGLLEGARKLLGEGAPLILYGPWLSDGIETAPSN
                     LGFDSDLKARDSEWGLRKVEDFAAGAKSRGFQLAAQRLMPANNLMLLFRKETAANRR"
     gene            17443..17919
                     /locus_tag="VHN55_04965"
     CDS             17443..17919
                     /locus_tag="VHN55_04965"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013848407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX2803318.1"
                     /translation="MNGQVDSANVRFPPPLIYLGFLVFGIWAGRAFAFPDLGMESSTR
                     DLFGWGVIAIGVIVGPLAGAGLFHRLRTAIIPFKPASRLVTSGIYRWTRNPMYLGMAL
                     IYAGIAVLFDSLLALVLLIPVLIIIQLYVIAREEAYLERTFGDEYLAYKARVRRWL"
     gene            complement(17923..>18336)
                     /locus_tag="VHN55_04970"
     CDS             complement(17923..>18336)
                     /locus_tag="VHN55_04970"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010336294.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     forms a heterodimer with subunit 1 to form the P protein;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEX2803319.1"
                     /translation="LNANYVLRALEDVLDAPFAKSGPCMHEAIFSDRGFSGGLSTIDL
                     AKALIDEGFHPMTMYFPLVVHGAMLVEPTETESKYALDQFIAAMRSIAERAKAGDERL
                     KSAPVYAPRRRLDETLAARKPVLVYREPEQAEAAE"
BASE COUNT         3271 a         5863 c         6036 g         3166 t
ORIGIN      
        1 gcgggtgcgg gcgattggcg acgacgccaa gctgatgctc ggcaagacgc cgggtaacgt
       61 cgaaacgatt cggccgctgc gcagcggagt catcgccgat ctcgacgtcg ccgaggagat
      121 gatcaagcat ttcatcagga aagcgcacgg cggcaaaagc cgcttgtccc gcggcccgga
      181 ggtcgtgatc tgcatcccct ccggcgcaac gccggtcgag cggcgcgcca tcaggcaggc
      241 agtgagcaac gccggcgcgg atcgggtttc gcttctcgag gaaccgatgg ccgccgccat
      301 cggcgcaggt ctgccggtca gcgacccggt cgggtcgatg gtcgtcgaca tcggtggcgg
      361 cacgaccgaa gttggagtga tttcgctcca aggcctcgct tattgctgct ccgagcgggt
      421 cggcggcgac cggatggacg aagcgatcat ttcctacgtc cgccgcaact acaatctgat
      481 gatcggggaa ggcacggccg agcgggtgaa gctggagatc ggcactgcgc gcgctccttc
      541 cgacgggacc ggtcgcacca cctacgtcag gggcagggac gtcagccgcg gtgtcccgag
      601 tgagatcagc ctcaaccagg cgcagattgc cgaggctctc gacgaacctg tcaaccgcat
      661 cgttgcagta gtccgctccg cgctcgagaa cacgcagccg gaactggccg cggatgttat
      721 cgactacggg atcaccatga ccggcggcgg ctcgctactt cgcgacatcg acggggtcct
      781 tgccgacgaa accggactcc ccgttcgcat tgccgaggac gcgctgacct gcgttgcgcg
      841 cggggctggc gagactctgg aggaccgctt gtatcgcgga gcgctgatgg cggcatagct
      901 acgcccccta gggtatcgat ccgatgtccg ggcggacgaa ttgtttccgt gcttccaccg
      961 agaacagacg ctgcggcgaa taaaatcgta gcggccagtc gcggcggccc atcggggaca
     1021 gcagaagttc gttgaccagc tcgtagagtg gctcctcgag gtccgcttcg gcgaggaaga
     1081 tgcggactcc ccggaggaac acgcgagtga ttgtctcgtg atagccttcg ctgtcgctgt
     1141 tcactccgcc gacgctctcg ttgtagcggc ggatgatccc gggaagctcc ttgtcgagat
     1201 ccacgtcggg ccgcttcagc agcagatagg tcgtggcggc gagatgcgct tcgtgagtcc
     1261 actcctcacg cggcaaggtg cgcgcgagca gcccctcgcc gagatgttcg atctcggcgt
     1321 cggaatggaa caggcggggc agaaattcgg tcatccaaat cgggtccttg tgcgggcccg
     1381 atccggcgac cgggctattc ggcgggctgc ggttgcgcgg cgcttggcgc ggcttggcga
     1441 acgccctcgt ccacctggtc cgcgaattga gcgaaatttt cgacgaacag gtcgacgagc
     1501 ttcgcggccg tccggtcata ctcctccgga tcgtcccagg tcgcccgcgg gtcgaggata
     1561 ttgtcgtcaa ctcccggaac gctgaccggc acgtcgaagc cgaagttcgg gtccttgcgg
     1621 aactcggcgt tcttcagcga gccgtcgagc gcggcgttga gaagagcacg agtagcctgg
     1681 atcggcatcc tcctgcccgt accgtacttg ccgccggtcc agccggtgtt gaccagccag
     1741 cagtcgactc cgcccttggc gatccgctcc ttcagcaaat tgccgtagac cgacgggtga
     1801 cgcggcatga acggcgcccc gaagcaggtg gagaaggtcg cttccggctc ggtcacgccg
     1861 atctccgtgc cggccacctt ggcggtgtag ccggacagga agtggtacat ggcctggtcg
     1921 ggggtcagct tcgagatcgg aggaaggact ccgaacgcat cggcggtcag catcacgaca
     1981 ttcttcggca ccggccccat attcttctcg gaagaattgg ggatgtaatc gatcggatag
     2041 gcgccgcggc tgttctcggc gagcgtcggg tcatcgaggt cgagttcgcg ggtaaccgga
     2101 tcgatgacga cattctccag aacggtcccg aagcgcttcg tggtcgcgaa aatctcgggc
     2161 tcggcctccg ccgacaggcg aatcatcttg gcgtagcagc cgccttcgaa attgaagacc
     2221 gcggtgtcgg accagccatg ctcgtcgtcg ccgatcagcg tgcggttcgg atcggccgac
     2281 agcgtcgtct tgccggtccc ggaaagcccg aagaagatgg cggtgtcgcc atccggaccg
     2341 atgttcgcag agcagtgcat cggcatgatt ccctgcggcg gaagcaggaa gttcaggagg
     2401 ccgaacacgg acttcttcat ctcgcccgca taggacgtac cgccgatcag gatcagcctc
     2461 ttagtgaagt tgactgcgat caccgtttcg ctccggcagc cgtgccgctc gggattggcg
     2521 cggaagctcg gaaggtcgat gatggtgaat tcgggcacga aatcgacaag ctcgtcgacc
     2581 gcgggacgaa ccagcatcgt gcggatgaaa aggctgtgcc acgcgagctc gttgatcact
     2641 cggactcgca cccggtgctc aggctgggag ccgccgaaca ggtcctggac gaagagcgtg
     2701 tccttctcgc cgagcgcggc gaggaaatcc tcgtgcagcc ggtcgaacgc ctcgggttcc
     2761 atcggcttgt tgcccttgtt ccaccagatg acggaatccg tcagctcgtc gcggaccgtg
     2821 aacttgtcct gcgcgcttcg gccggtgtgc ttgcccgtct tgacgaccag cggcccgtcc
     2881 ttggcgagga gtccctcttc gcgctgcgcc gcgaactcga ccagcggagc ggtcgtgagg
     2941 ttccagtgaa gcttggccgg ggtcacgatc ccctgggcgt ccagtccgtg tgatgcgacc
     3001 ctttcggcca cgcgctttcc cttcccgcaa ataagaacgt gcggcggcgg cccattggca
     3061 gccgccgcac cattgttacc aagcgcctat agccccgaaa aagttgccgg gtcaaagtcc
     3121 ttgccgcacc ttgtctcgcc cggaacccac gcgtaagccc aagtcggacc gcctcaatga
     3181 gccacgtgat cgcgctggtc gatgacgacc gaaacatcct gacctcggtg tcgatcgccc
     3241 tccagtcgga gggattcatc acccgcgtct acaccgacgg cgcaagcgcc ctcaaagcct
     3301 ttgccgacaa tccgcccgac gtcggcgtct tcgatatcaa gatgccgcag atggacggaa
     3361 tggagctgtt gcggcggctc cgcgaattca gcgccatgcc ggtgattttc ctgacgtcga
     3421 aggacgacga gctcgacgag gcgctgggcc tcgccatggg cgcggacgat tatatctcca
     3481 agcccttctc ccagcggctc ctgctcgcgc ggattcgcgc aatcctcagg cggcaggatt
     3541 tcgccaggaa cgaagccgtg tccgcacccg aagcggagcc ggagctgatc gagcgcggcc
     3601 gcctgagcat ggacccggcc aggcacaagg tgaagtggga cggaaaggac gtgacgttga
     3661 ccgtcaccga gttcctgatc ctggaagcgc tggcgcagcg gccgggagtg gtgaagaacc
     3721 gcaaccagct gctcgatgtg gcctatcagg aagacgtcta cgtcgatgac cggacgatcg
     3781 acagccacat caagcgaatc cggcgcaagt tccgcgccgc cgacccaaag ttcgacgcga
     3841 tcgagacgct ttatggcgtc gggtacaggt ttgaagacca gtaggcgcaa gcggcacccg
     3901 gcgcggccct ggaccgcccg gtggacgctc acctggcgga tccttgccgt caacctgctg
     3961 acggttctga tcctcgcgct gggagttttc tatctcgacg cattccggaa caagctgagc
     4021 aaggaacgga tacaccggac cgagcgtgaa gcgcagatca ccgcgattgt cgcccgctcg
     4081 ctgccgcctg agcgccgcgc gttggcgctt gccgccgtcg gcaaatcgac gcgcagccgg
     4141 attcgccttt acgaccccga cgggcgcctc gtcgccgaca gctggcgggt tactggagcc
     4201 acctaccgac tccgcgatcc tgccgaggaa agctggatga aggatgcagc gcgggcgctc
     4261 gaccgcggct tcaatttcct agtcggcgcc gaatatgcac ccgcgttcat cgagccggcc
     4321 gaagaccgga tcaccgcctg gccagaggcc tatcaggcgc aaacgaagaa tgcggtgacg
     4381 agcaaggtcc gcaccgcccc cgacctgact ccggttctct ccgccgcggc tccggtcgac
     4441 ggcggagcgc ttctcgtcac ttcgaacgag cggggcctga tcaagacgat gcgcagccag
     4501 cgcgcaatcc tcgccataac gatgagcgtc gcgatcctgc tctcggtgct cctgtcgctg
     4561 ttccttgccc ggacgatcgt ccggccgctc cgccgcatcg cactcgcggc gcaccgagtc
     4621 cggctcggac gagcgcgcga agtgcgagtc ccaagactac cctcgcgccg ggacgagata
     4681 ggccttctcg cccgctccgt gtccgacatg agccagtcgc ttcgcgagcg gatcgacaat
     4741 atcgaagcct tcgcggcgga cgtcacccac gagctgaaga atccgctggc ctcgcttcgg
     4801 tcggcgctcg aaggactcga gacggtgaag gacgatgcgc tgcgcagccg gctgatgaat
     4861 gtcgcacgca ccgacgtagt caggctggac aggctgatta gcgacatcag cgaggccgct
     4921 cgaaccgatg ccgagctggc tcgagcgcga ttcgagccag tcgaccttgg ctcgctggtc
     4981 gaacagctgg tcaacagctg ggaaacacgc cgcgagaagg gcgatgctcg cctggcattc
     5041 gcccgtccgc gaaaggcgag cacccaggtg ttcggcgatc ccggacgact ggcacgggcg
     5101 atcgacaacg tcctcgacaa tgcggttagc ttctcgcccg ctggaggact ggtggagatt
     5161 gccgcgtcgc gggtcgggaa ccaggttcgc atccgaatcg acgacgaagg gcctggagtc
     5221 ccgcctgacg cgcgggaagc catcttcaac cgctttcact cgattcggcc cgagggcgag
     5281 catttcggac gccattcggg cttggggctg gccatagcga aggctattgt cgaagggcat
     5341 gacggagaaa tcagcgtgta cgaccgagac gacgcaccct cgggcgcccg cttcatcatc
     5401 tcgctcccgg cggtagagca gcagtgagct cggttcgcag gctttcaagc gaaaccgtcc
     5461 atgcgaccac ggtggccctc gacggccgat cggtgctgat taccggtcct tccggagccg
     5521 gaaagtccga tctcgcgctc cgcctactcg atcgcggttt ttcgctcgtg agcgacgacc
     5581 agacgatcgt ccggcgcgat ggggagaggc tggttgcctc cgctcctccg cagatcgccg
     5641 gcaagctgga agtgcgaggc atcggaatcg tcgagatgga cacggcggcg gatgttccgg
     5701 ttgctctcct ggtcgagctt agaagcgaca tccagaggct tccggacgac agccgcgagc
     5761 gccagcttct cggcgtgccg ctgccgctgg tcagcatcga cgcagcggcc gcctcggctc
     5821 cggcaaaggt ggagctggcc ctcgaccgtt tggggcttac cgcgaggtga gcgcgacgca
     5881 gcgaaagccg cgcctgctgc tcgtcaccgg gatgtccggg gcagggaaat cgacggcact
     5941 cgatgcactc gaggacatgg gttgggacac ggccgacaat ttgccggcgg acctactcgc
     6001 gggcttcgtc cacggtagcg accagtgccg caccgtcccc gtcgcgatcg ggatggatgt
     6061 gcgaagccgc gggttcgacc cgcacaccct gccgaaactg atctcggaaa tcgagggagt
     6121 ggagcccgca atcctgttcc tcgattgttc gagcgccgac ctgatgcgca ggttcgacaa
     6181 gacacggcgc cgtcaccctc tggcgcccga caggccggcc gaggacggga tcgcccgcga
     6241 acggacgatg ctggcgccgg tcaggagcgc ggcagacatc gtcatcgata ccaccgatct
     6301 tgcccccgcc gagctggcag aggagctccg gcgccggttc aagacggagc gtgagccggt
     6361 ccttaccctg atatcctttg ggttcggaca tgggatttca aggacggccg acctggtatt
     6421 cgacatgcgg ttcctcgcca atccgcactg gatcgacgag ctccgcgacc tgaccggcaa
     6481 cgaccggccg gtacgggact atgtcgcccg cgatcctgcg tggacggagt cgatggatag
     6541 aatcgaatcc cttctcaccg attggattcc acgctactgg gccgcgggca aaagctattt
     6601 gacgatcgcc ttcggctgca caggggggcg tcaccggtcg gtgaccgcgg cagtggaaat
     6661 ggcgggaagg ttgcaagcgg cgggtttcag tccaaacatc cggcaccgcg atctggcgtc
     6721 gacgccaaac gacaggatcg aggacaaggc cggaagcgca gccgccagcg agagtggaag
     6781 cgagttgaac gaatgattgg aatggtgctg gtgacccatg gccgtctagc cgcggagttc
     6841 atcactgcga tggagcatgt cgtcgggccg cagcaggcag tggatgcggt atgcatcggt
     6901 cccgacgacg acatggagga gcggcgcaag gacatcgccg ccgccatcaa gcgagtcgac
     6961 cagggcaagg gcgttatcat tctcaccgac ctgttcggcg ggacgccatc caaccttgcg
     7021 atcagcctga tgaaaaccga aaacatcgag gttatcgccg gggtcaacct gccgatgctg
     7081 atccggctcg agggagcgcg caaggtgatg ggcgtccatt ccgcggtcgc agcggcccgc
     7141 gaagccggac gaaagtatat ctcggtcgcc tccgagattc tcggggaagc cgccgcttga
     7201 gcgcaacgag ccgcgaggtt cggatcgtca acaggcgcgg gctgcacgcc cgggcgagcg
     7261 cccaattcgt caacatggcc tgcgagcttc cggccacgat cgaggtcgag aaagacggga
     7321 accgggtctg cggaacttcg atcatggggc taatgatgct cggcgcggcg atgggcgatt
     7381 cgatcgtcat ccatgcggag ggcgacgggg ccgaagacgc gctggagaag ttgctgcaac
     7441 tggtcgaaac cgggttcgga gaagaggcgg gcggctgatg ccgaggcagg tcactgcctt
     7501 ttccaacgcg acggtgaagc ggctgcggtc gctccgggac aagaaggcgc ggcgggccga
     7561 gcggatgttc ctggcggagg ggctgcggat catcgccgaa gcgcgcgaca gcggacggct
     7621 gcccgagatc atcgcctttt ccgcggaggg cgcgaaacac ccgctggcag cggagatcat
     7681 cgccgcaacc gaagccaatg gtggtgaggc catagagacc acggcggaca tcctcggcaa
     7741 gatgagcggc aaggacaatc cgcagatgct cctcggcgcc tacccacagc cggagacgcg
     7801 gctggacctg atcgaccgct ccacggctcc aatttggatc gtcgcgcagg cgcttcgcga
     7861 tcccggcaac atcgggacga tccttcgcac cggcgacgcg gtcggcgcgg gcgggctggt
     7921 tctcgtcgat gattgcgccg accccttctc ggtcgaggcg gtgcgggcat cgatgggcgc
     7981 cgtcttcacc caacagatcg cgaccgcaag ttggccagat ttcctcgcct ggctgcgatc
     8041 ggcgcaatcg caactggttg ggaccagcct gaaggcttcg gccgattatc tcgaagcgag
     8101 ctacgaggcg ccctgtttcc tactgatcgg caacgagcag cagggtctcc catccgatta
     8161 tgaacgcgag tgtgacctgc tggtgaagat cccgatggcg ggccgcgcgg acagcctcaa
     8221 cgctgccgtg gcggcggcgg tcatggcgtt tgccgtgaag gcgagctggc gctgacggga
     8281 actcccatcg gccagcggct ttgtggcttc atggacaagc gcctcgcgct cctcatcgct
     8341 cccgcattcc tcggcggctg cctcccccat ccgccgccgc cccccgcgcc ctatcacgcg
     8401 gtcgggcagg gttcggtgtg gaacctcatc atcgacgaca agaacgtcac cttcatcgcg
     8461 tcgggaaagc agccgatcgt ggagccgaag ccggccgtga tcatcggcat tgccggggaa
     8521 atctaccagg cgaagcgaat caacgtgaac atcgtccacg gccattgcgc ggcgaacggg
     8581 cgcgatttcc cggaccgcgt gcaggtctat gtcgacgatg ttcggcacga gggttgcggc
     8641 gggctctgaa ggagattccc gatgcttcgg attccaatgg cgaccgcgtt gttcgttgcg
     8701 gcagcgctga ccagttgtgc cgcgccgcct cctccgccga tcgctgagct gagcggaacg
     8761 agttggcgca tcgtctccgt caatgggcgg cagacaccct ccgcgggtga ttattcgatg
     8821 cgcttcgagg cgaacggcgg cttcggcgcg cggttcggat gcaattcgat gggcggcagc
     8881 tatcgcctgg ttggcggaac ccttaccgtc agcaacgtca accagacgct gatgggctgc
     8941 ccggagccgg ccgccagctt cgagagccag ggcgccgcga tccttcagca gccaatgcag
     9001 gtcagcttca cgagcaacga gcggatgggc ctcaacaacg ccgccgggtc gatcgccctc
     9061 gatcctgtgt cctagaactc agtcctcgtc ggcgtctgcg tcggcatcgg ccttctccag
     9121 gcgcggggaa agcgggtcgt cgatcgagac gacgaccggc tcaccgtcct tgaccgggag
     9181 cttcgtaagc ggccgaggcg aggcttcgac catcggcggc ggcgggattt ctttcgcgct
     9241 tccggcgccg aggtcctcga agcgccgagc ctgtgtgaac acctggcttt caaggcttcc
     9301 caccatcttg ttgtaagcgt tgttcatccg gccgaggttg gtgccgacgg acgcgacatg
     9361 ctccgccatc gtcgccagcc gcgagtgaag ctcgcggccg agctcggcga tcttccccgc
     9421 ttcggcggcg agcttctcct ggttccagat gctcgccacg gtgcgcgcga tggcgacgag
     9481 gttggtcgga gtcgcaagaa gcaccttgcg ctcgttcgcc cagtcccaaa gcccgtggtc
     9541 gagctccagc gctgcggtga ggaaatgctc gccggggatg tacattacga catagtccgc
     9601 cgaatccccg aattgcgccc agtaggactt cgacccgagc tgctgcgcgt ggtttcggat
     9661 cgacgcgagg tgcgattcga gacaggactt ccgcttgtcg tcgtcgacct cgtcgcaggc
     9721 gtcgagatag gcgttcagcg agcatttggc gtcgatcacc agcgtgcgtc cgcccggcag
     9781 gttcacgatc acgtctggcc gaagcttccc gtcgtcgcca tcgaccgtca cttccgtctg
     9841 gaagtcggcg taggggctca accctgcctg ctcgagcacg ttgcgaagcg actgctcgcc
     9901 ccagcggccg cgcgcctttg gcgatgaacg cagcgcgttg acgaggttgc gggtttcgtc
     9961 gcggacctgg ccctggtcct tgcgaagctc ccccatcagc ccgcgcaact cgccatagct
    10021 gtgggtgcgc tccttctcga tcgcgtcgag ctttgcctga tattgtttca gcgtcagctc
    10081 gacgggttga agcagggtct ggagcttggc ttgcgatgcc ttgtcggctt ccgacagctg
    10141 gactccggcc ttttcgagaa aatccttgtg cgctttctgg agaagctggt cgccaatctc
    10201 gcggaactgc gtgacgagcg aatcgcgcga ttgcgcgagg tccttcatcc gttgctcgaa
    10261 attgcgcgcg tccgcctgaa gcgcggccag ctcgcgcgac gacgcttcgt ggctggcccg
    10321 cacctggtcg cgttccttga cgacttcgtc gagctgaagt cgaagagtct gtgcagtctg
    10381 ctttgcagcc gccgactcgc ggcccgcgta cagccagccg atcagcgccc cgacagcgag
    10441 ggcagccaca acagccgcga ttacgcccca atccatactc attcccctga cggaacagaa
    10501 tgtgaaccct acgcttcgca aaggactcgc tcaagcggga accaccctcg tgtccacagg
    10561 ttcggccatc tgagagcagg agaaagccat gtccattcgc aagatgatcg ctctgcaccc
    10621 cgacgtgcag ggccatgtga atcagccgct cggcgatgcc gcgcatcacc tgatgtattg
    10681 cgctcggatg tgcgtgagct gcgccgacgc ctgcgtcgcc gagtcgatgg acatgaccca
    10741 gtgcatccgc gcctgcctcg actgcgccga cgtttgcgag gcgaccggca agctggcggt
    10801 gcggcgggcc ggctccaacg aggccgtgct caaggagatg ctggaggttt gcgcccgggt
    10861 ttgcgatgcc tgcgccgcgg aatgcgagaa gcacgatcac gagcattgca agctgtgcgc
    10921 gcagatgtgc cgcgagtgcg ccaacgactg ccgcgccgcg gccgagtcga taacaccgga
    10981 gagttgatcg tgcgcaactg gttggcagct gccgcgctgg ttgcgctggc gggctgcgac
    11041 aacagcgtcc cgaccggaaa cgagccgaac ggcccgatca tcaccgtcga gccggacgat
    11101 aacggcgccg cagatggcgc tccggccgac gcggcgggtg ccggagagct gccggcggcg
    11161 ggaccgattc cgcgcttcgt cggcaaatgg gcggcggacg agaagtcctg ccagtccctg
    11221 gcatggcaat tcaccgccac gaccctgcgc acgccggccg gatcgagttg cagcttcaat
    11281 cggataagcg aagtgccggg cggctacgac gtggacgcga cctgcactgc ggaggggccg
    11341 ccgactgacg acgtgcttga aatccgcttc gccgaatcgg cgaaggcgat gttgttcgaa
    11401 tcggaaacgg tcgcggacag cggcctggtg ttctgcggcc gcgatgtttg aggatcggct
    11461 aggccgccct cttttcctgc tctttccgtt gcttggcgag cttctttagg atcatttcgc
    11521 gcttcagccg cgacagatgg tcgatgaaca aaatgccttc gagatgatcc atctcgtgct
    11581 gcaggcaggt cgcaagcagc ccttcgatgt cttcctcgtg gcggtcgcca ttctcgtcga
    11641 gccagcgggc gcggatgcgg tccggacggt cgacgtcggc atattggtcc ggcaccgaca
    11701 ggcagccttc cgtatacggc acttcctggt cggaggactg gaggatttcc gggttaatga
    11761 agatgcgcgg atccttaacc ggctcgccgc cctcttccgc cggctcctgg aggtcgatga
    11821 cgaggattcg cttgggaaca ccgacctgga tcgccgcgag cccgatgccc ggcgccgcgt
    11881 acatggtttc gaacatgtcg gcgatcagcg cgcgcacttc gtcgtccacc gcctcaactg
    11941 gcgcggatat ctgccgcaga agcgggtcgg gaacttcaac gatcggtcgg atggccatga
    12001 ccataattta agtccgtccc cccttccctg caagggaggg agggggtttc agttctgcgg
    12061 atggtgcgga acgaggacga gagtccggtc ctcaacgcgc cacgactgca gctccgacag
    12121 gaaattcatc ccgatcacgt cgagcccgag gccgggcgcg cttacgacct tgatgtcgcg
    12181 ggcgaggatg ttgccgacac gaagctcctc gatcgtcccc gtttgcgccg gagtcgcgcc
    12241 gttggcggtg cggaggatga cgggtgcgac gcccatcccg gtatccaccc cggcggcacg
    12301 cacggtctcc tgcgaaatcg ccgtgaccgt ggctccgctg tcgatcagca ttcgtcgctt
    12361 gacgccgttg atcgtcgcat tgacccagaa atgcccgtcc ggggacattc gaacgcgaag
    12421 ctctttccct tcgacggtct ggttgtcgag gccgagctgc tgggtgaagc gagccagcgt
    12481 cggctgatag ggcgcctgct gcaggacgag gaagactgcg aaggcgagga tcgcgaacga
    12541 cagcaggaag cggaagatcc ggccgacgta cggcaggcgc tggaggatca cgacgatgac
    12601 cgcgatcccc acggcgtata tcgccaaatg ctgccagtcg gggagcgccg tcatccgagg
    12661 ggccgcctcg cccgaagggc ctgcgcaagg gtcccctcat cgagatagtc gagctcgcca
    12721 ccgacgggaa ggccgtgagc gagctgagtc agccgcaccg gataggtctc gagccgttcg
    12781 gcgaggtagt gcgcggtggt ttgcccctcg agcgtagcgt tcatggccag cacgacctcg
    12841 tcgattcccc ccttggcgac ccggcgcacc agcttgtcga tggtaaggtc atcggggcga
    12901 actccctcta gcgccgacaa tcggccgccg agtacgtgat agcggcccgg gaagagccgc
    12961 gaacggtcga gcgcccacag gtccgccacc tcctcgacca cgcacaggga ccggtcgtcg
    13021 cggcgcgggt cgcggcagat tccacacgga tctgatgtgt cgacattgcc gcaggtcgag
    13081 caggtcgaaa gcgtgtccgc gaccttctgg agcgctgcca ccaatggctc cagtgtggtc
    13141 tcgcgcttct tcatcaggtg caggaccgcg cggcgcgccg accgggggcc aagccccgga
    13201 agccgtgcca acgcattcgc caacgtctcg atttcctggc ttgccactgc cgcggagata
    13261 ggaatttccg cgtctccgcg ccataggcca acgcaatgcg gatcgtcttc atgggatcgc
    13321 cggatttcgc ggtgccgagc ctcgatgccc tcgccgcggc ggggcacgag ctgatttgcg
    13381 cctatacgca gccggcgcgg cccgccgggc gcgggaaggg cgaacagaag acggcagtca
    13441 acaagcgcgc cgaagagctc ggcgtcgagg tccgctgtcc ccgaacactg aagggccccg
    13501 aggagcaggc gagattcgcg gcgctcgatg ccgacctggc ggtcgtcgcc gcctacgggc
    13561 tgatcctgcc caagccggtg ctggaggcac cgaaggccgg atgtatcaac gtccatgcgt
    13621 cgcttctgcc ccgctggcga ggcgcggcgc cgatccagcg cgcaatccta gcaggcgacg
    13681 aagtgacagg cgtcacgatc atgcggatgg cggaagggct cgacaccggt ccgatgctgc
    13741 tgaagcgcga gacggaagtg gatagcaaga ctgctggcga gctgaccgac gaactcgctt
    13801 cactcggagc acaggcgctg gtcgagtggc tcgacaatcc agcgccaccg gttccccagc
    13861 ccgacgaggg agtcacctac gcctcgaaga ttgacaaggc cgaagcgcgg atcgactgga
    13921 gtcgcaccgc gtccgagatc gagcggcagg tgcgcgcctt cgccccctcc cccggtgcct
    13981 ggttcgacgc gaacggagag cgtgtgaaac tgctcgaggc ccaaatcggc gacgcgagcg
    14041 gcaaggccgg tgaagtgctc gacgattgcc tcaacgtcgc ggcgggcgaa ggctatgtgc
    14101 gtccgctcaa ggtccagcgc gccggacgcg gcgtcatgac tgcaggcgag ctgcttcgcg
    14161 gctttccgat ccccaaaggc accatcctca agtgacccgc tggcggctga cgatcgaata
    14221 tgacggcggc ccgttcatgg gctggcagcg gcaggatcat ggcccgtcgg tgcagcaggc
    14281 gatcgaggaa gcgctggccc ggatgaccgg cgaactcccg accgtccatg cagccgggcg
    14341 gaccgatgcc ggcgtccatg cgctggcgat gagcgcccat gtcgatatcg agaagacgct
    14401 gactcagcac cgccttcgcg aaggcgtgaa tgcgctgctt cgtcccgccc cgatctcggt
    14461 gctttcggca gagcatgcgc ccagcgactg gcatgcgcgc ttctcgtgca tcggccgccg
    14521 ctacctctac cggatactga accgcagggc gccgccggcg ctcgacctcg gccgggtctg
    14581 gcacgtcgcc gtcccgctcg acgaagacgc aatggccgag ggcgcggcca tgctggtcgg
    14641 gcgccacgat ttcaccacct tccgctccgc ccactgcaag tccgacagcc ccgtaaagac
    14701 gctcgaccgg ctcgaagtct tgcgcgttgg cgacgaaatt cgcatcgagg catcagctcg
    14761 aagctttctc caccaccagg tccgatcgat ggtcggctgc ctggcgcttg tcggcagggg
    14821 ccagtggaaa ccccaggaca tcggacgggc gctggaagcc cgcgaccgtt cggcgctcgg
    14881 cttcaacgcg ccgccgcaag ggctccattt cgtcgaggcg ctgtacccct agtcggtctc
    14941 gactgcctgc agcggggccg cggcgacaag tagccagccg gcggcgacga agcttgccgc
    15001 gaacacccag gcgaaggtcg cgagaatctc gctcgtttgg ccgaacaggc catagacgag
    15061 gaccgcgacc ggaaggccgg cgagcagcag caccgcgaga agcaggtcga tcccggcggc
    15121 gagatagacc caggtgcaca gcggcctcgg cgagtgccgc gaggaaatga acagggccgc
    15181 gcttctcacc accagccaca ggatgacgac attgaggatg gtgggaaagt tggcgttcgg
    15241 gtcgagcgcc aaccgaagcc ccgcaatcag gctcgccgcg gccgcgattc cggcggtgat
    15301 atggtgcccg cggcgggcga acaccgacgc gagctcgatc gctccggcgg ccgtcagcag
    15361 aaacccgatc acgacccgcg ccgaaaaccc agatgccatc ggcaggagag ccgacccgag
    15421 ggcaagcagc atgatcagca cgccggccga ccggatgacg accgttcgag tccagttcga
    15481 catgaccggg ttttacccaa tcggcaccga tccggccagc gcacgcttga ttgcaggcgg
    15541 gacacggcca cgccggagca atgcgaaacc agatggtaag cctttcaact cacagtaggt
    15601 tcgcgaaaga agccggtgat tgccggatgg caggggtgcg agtttggaag agctgccgat
    15661 cgaaacgacg atctattcga tgtcgccaag gccgccggaa gaagaccgga ggacggacga
    15721 acggcacctg accctgttcc gggtcgggac ccttgtcctt ggcgaccgcc gcgagttgtg
    15781 cctggtcaag aatatctcgg ccggcggagt ctcgatacgc gcttattgtt ctctcgaacc
    15841 ggacacggtg ctgtcgattg agctcaagga atcgcaaccg gttgccggcc aggtcacctg
    15901 ggtccgcgga agcgacgccg ggatcacctt cgacgagcgg gtggacgtca tcgatctgct
    15961 cacgtcaagc gtcgacgggc cgcgcccgcg aatgccgcga atcgaagtgg agtgcgtctg
    16021 cttcgtgcgc gagggcgcaa tcgtccatag ggcctcgctc cagaacatat cccagggcgg
    16081 agtcagcgtc gaagcaccca atccgctgag tgttggagga gaggtcaccg tgagcctccc
    16141 tgggctttcg ccgcaagcag ccacggtgcg gtggaagcat ggcagccgct acggaatctc
    16201 gttcaacagc gtgctctcgc tagccgggct ggtgaagtgg cttcacgagc gcggcaacgg
    16261 ctaggcaggg cggagaaact ccatttctgt ttagaggccc gggcgatcgt gcacgctcgg
    16321 atcgatagcc caggcttcga tgagtcgacg ctcgctcgac gtgagcggcc gggcaccgaa
    16381 acccggacgc ttcacgaact cgggcggagg cttgcgctcg ccggtcggca cgtgccgcag
    16441 aacttctcgc gggaagagcg ggtagtcgaa ttctagcccg gcgtggttgc aatgcgccca
    16501 cgcgactcgg ctcggaacgc tcagtccttc gcggtggaag aggacgcgag tgcccggaag
    16561 gggaagctcc tcgccttgca ccagcgcgcc gttctcggag agattgcgca gcacgacggg
    16621 aagcgaagcg ccgggcgcct ccagcgtcgc cttgagcatc acattcgagc ggcggttccg
    16681 cctgttttga ttttgaaggc tatggtccat cgacagagac gttatacctc gggagtaaat
    16741 catagtttaa cggcgattcg cggctgtttc ctttcgaaac agaagcatca ggttgttcgc
    16801 cggcatcagc cgctgcgcgg caagttggaa acctcgcgat ttcgccccgg cagcgaaatc
    16861 ctcgaccttt cgaagccccc actccgaatc tcgtgctttc aagtcggaat cgaaaccgag
    16921 gttactcgga gcggtttcga tcccgtcgct tagccaagga ccgtagagaa tcagcggcgc
    16981 gccttcgcca agcagcttcc gggcaccttc gagcagcccg atcgccgcgc tccacgggct
    17041 gatatgcacc atgttgatgt tgagaacggc atcggcccgg ccgatcggcc agtccggcgc
    17101 agaggcatcg agctcgatgg gctcgcgcaa attcgcaagt gccgattgtt gccgccatgc
    17161 ccgaatagaa gccagcgcct cgggatgggt gtcgctcggc tgccagtcgc ggtcgggaaa
    17221 gcgcctggcg aaatggaccg catgttcgcc cgtcccgctc gccacttcga ggacgaggcc
    17281 tgcgtcgggt agccattcgg cgaggacgtc ggcgattggc tcgcggttgc gaagcgccgc
    17341 cggcgcggag cgctgcccgg cagcggcagg cgtttcgtag aagcggcgat cgtcattcat
    17401 ggtacgtgcg ctatagtcgg gcaatccatg ggagggacag gcatgaatgg acaggtcgac
    17461 agcgccaacg tccgctttcc gccgccgttg atctatctcg gcttcctggt cttcggaatc
    17521 tgggccggcc gtgctttcgc cttccccgac ctgggaatgg agtcgagcac ccgcgatctt
    17581 ttcggctggg gcgtcatcgc cattggcgtg atcgttgggc ccctggccgg cgctggcttg
    17641 ttccatcgac tgcgcacggc aatcattccg ttcaagccgg ccagccggct cgtcacgtcg
    17701 ggcatctacc ggtggacgcg caatcccatg tacctcggca tggcgctgat ctacgcgggc
    17761 attgcggtcc tgttcgacag ccttctcgcg ctcgtgctcc tgataccggt gctgatcatc
    17821 atccagctct acgttatcgc gcgcgaggaa gcctatctgg agcggacctt cggcgacgaa
    17881 tacctcgcct ataaggcgcg agtgcgccgc tggctctgac gcctactcgg ccgcctctgc
    17941 ttgctccggc tcgcggtaga cgaggacggg cttccgcgcc gccagagttt cgtccagcct
    18001 ccgcctcggg gcatagaccg gcgccgactt gagcctctcg tcgccggcct tggcgcgctc
    18061 ggcgatcgag cgcatcgcgg caatgaactg gtcgagtgcg tatttcgatt ccgtctccgt
    18121 cggttcgacc agcatcgctc cgtgcacgac gagcgggaaa tacatcgtca tcggatggaa
    18181 gccttcgtcg atcagagcct tggcaaggtc gatcgtgctt aatccgcctg agaagccgcg
    18241 gtccgagaag atcgcctcgt gcatgcacgg cccgctcttc gcgaacggcg catcgagcac
    18301 atcttctagc gcgcgcagca cataattggc gttgag
//
LOCUS       DATAKH010000115         2313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2512,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000115 DATAKH010000000
VERSION     DATAKH010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2512"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VHN55_04975"
     CDS             complement(<1..512)
                     /locus_tag="VHN55_04975"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX2803320.1"
                     /translation="MGYQADLKLFINGSWRTGEGRDSFPVVNPATGEGIAELPLATEA
                     DLDEALDTAKRTYPEWRATDVETRSKILHKAAKLLKERADDIARTMTQEQGKPLAESK
                     GEVFGAASLFDWYAEEIKRDYGRVLVRPPGQLSRVMHEPVGPVATFTPWNFPIYLLAK
                     KVSAALAAGCS"
     gene            583..882
                     /locus_tag="VHN55_04980"
     CDS             583..882
                     /locus_tag="VHN55_04980"
                     /inference="COORDINATES: protein motif:HMM:NF014132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HEX2803321.1"
                     /translation="MNKQELAQKMQENQAWVPGKTVKLDFGEQGVIFLDGAAEKVTEE
                     DSAADTTIKMAWDDWQKMAAGELDGMTAFMTGKLKIEGDMSNAMQLQGVLAKLRG"
     gene            884..1594
                     /locus_tag="VHN55_04985"
     CDS             884..1594
                     /locus_tag="VHN55_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEX2803322.1"
                     /translation="MAQKIYPDAKAALDGLLHDGMLIAAGGFGLCGIPERLIDAIVES
                     GVKDLTIASNNAGIDNVGLGKLLRTRQIKKMISSYVGENKEFERQFLAGELEVEFCPQ
                     GTLAERMRAGGAGIPGFYTKTGVGTQVAEGKDVKEFDGEDYVLERGIFAELSIVKGWK
                     ADESGNVMFRKTARNFNLPAATCGKVCVVEVEEIVPTGTLDPDCIHLPSIYVNRLIDG
                     SPYDKQIEFRTVRERKAA"
     gene            1591..2094
                     /locus_tag="VHN55_04990"
     CDS             1591..2094
                     /locus_tag="VHN55_04990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803323.1"
                     /translation="MMLKLTMLAALVSLQATAAAAAPAPADDLAAIGRAIDDTYAVIS
                     GPAGQKRDFDKMRTLFAPGATLRVIGPKGLSGGTVDDYIAKSGPVLEKEGFTERELSR
                     RVEVYGNLATAWSSYDGRTESGKIHVRGINSFQLVQLDGKWLVASILWQPESPELPLP
                     ADMAGGQ"
     gene            2098..>2313
                     /locus_tag="VHN55_04995"
     CDS             2098..>2313
                     /locus_tag="VHN55_04995"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010339183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX2803324.1"
                     /translation="MPWTRDQMAARAAKELRDGYYVNLGIGIPTLVANNIPEGMTVTL
                     QSENGMLGIGPFPYDDEVDPDLINAGKQ"
BASE COUNT          451 a          697 c          763 g          402 t
ORIGIN      
        1 gagcagccgg cggcaagcgc cgcggacacc ttcttggcga gcagatagat cgggaaattc
       61 cacggcgtga aggttgctac cggcccgacc ggctcgtgca tcacccggct gagctggccc
      121 ggcgggcgga ccaatacgcg gccgtagtcg cgcttgatct cctcggcgta ccagtcgaac
      181 agcgaggctg cgccgaacac ttcgcctttc gactcggcga gcggcttgcc ctgctcctgg
      241 gtcatcgtgc gggcgatgtc gtcggcgcgc tcctttagga gcttggccgc cttgtggagg
      301 atcttcgagc gcgtctcgac gtcagtcgct cgccactccg gataggttcg ctttgcggtg
      361 tccagcgcct cgtcgaggtc ggcttcggtg gcgagcggaa gctcggcgat gccctctccc
      421 gtggctgggt ttacgacggg gaagctgtcg cggccttcgc cggttcgcca gcttccgttg
      481 atgaagagct tgaggtctgc ctggtatccc atggcgccca gataggctcc gcttgatgcg
      541 cccgcaacgg ctcgctaggc gctggagcaa aggagacttg ccatgaacaa gcaggagctt
      601 gcccagaaga tgcaggaaaa ccaggcgtgg gtgcctggga agactgtaaa gctcgacttc
      661 ggcgagcagg gcgtgatttt cctcgacggc gctgccgaaa aggtgaccga ggaagactcg
      721 gctgctgaca cgacgatcaa gatggcttgg gacgactggc agaagatggc cgcgggcgag
      781 cttgacggga tgaccgcctt catgaccgga aagctcaaga tcgaaggcga catgtcgaac
      841 gcgatgcagc tgcagggcgt gctggcgaag ctgagaggct aaattggctc agaaaatcta
      901 cccggacgcc aaagccgcgc tcgacgggct tcttcacgat ggcatgctga tcgccgcggg
      961 cgggttcggg ctgtgcggga ttcccgagcg gctgatcgac gccatcgtcg aaagcggcgt
     1021 gaaggacctc accatcgctt cgaacaatgc gggaatcgac aatgtcggcc tgggcaagct
     1081 gcttcggacc cggcagatca agaagatgat cagctcctac gtcggcgaga acaaggagtt
     1141 cgagcggcaa ttcctcgccg gcgagctcga ggtggaattc tgcccccagg gcacgctcgc
     1201 cgagcggatg cgcgccggcg gtgctggaat tcccggcttc tacaccaaga ccggagtcgg
     1261 cacccaggtt gccgagggca aggacgtgaa ggagttcgac ggcgaggatt atgtcctcga
     1321 gcgcgggatt ttcgccgagc ttagcatcgt caagggctgg aaggcggacg agagcggcaa
     1381 cgtcatgttc cgcaagacgg cccgcaactt caaccttccg gcggcgacct gcggaaaggt
     1441 ctgcgtcgtc gaagtcgagg aaatcgtgcc gaccgggaca ctcgacccgg actgcatcca
     1501 tcttccgtcc atctatgtga accggctgat cgacggcagc ccgtacgata agcagatcga
     1561 gttccggacc gttcgcgaga ggaaggcggc atgatgctga aactcacgat gttggctgcc
     1621 ctggtttcgc tccaggcaac ggccgcggcg gcagctccag ctccggcgga tgacctggcg
     1681 gcgatcggcc gagccatcga cgatacctat gcggtgattt ccgggcctgc cgggcagaaa
     1741 cgcgatttcg acaagatgcg cacgctcttc gcccccggcg cgacccttcg ggtaataggg
     1801 cccaagggcc tgagcggagg gactgttgac gattatatcg ccaagagcgg ccccgtcctg
     1861 gagaaggaag gcttcaccga gcgcgaactt tcccgccggg tcgaagtcta cggcaatctc
     1921 gcgaccgcct ggtcctccta tgacggccgc accgagagcg gcaaaatcca cgttcgcgga
     1981 atcaatagct tccagctcgt ccagctcgac ggcaaatggc tggttgcgtc gattctgtgg
     2041 caaccggaat cgcccgaact cccgcttccg gcagacatgg ccgggggtca gtagcgcatg
     2101 ccctggaccc gtgatcaaat ggccgcgcgc gccgcgaaag agcttcgcga cggctattac
     2161 gtgaacctcg gaatcggcat tccgacgctg gtggcgaaca acattcctga aggaatgacg
     2221 gtcactcttc agagcgagaa cggcatgctc ggcatcgggc cgttcccgta cgacgacgag
     2281 gtcgatcccg acctgatcaa cgccggcaag cag
//
LOCUS       DATAKH010000116         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10166,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000116 DATAKH010000000
VERSION     DATAKH010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10166"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VHN55_05000"
     CDS             <1..259
                     /locus_tag="VHN55_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803325.1"
                     /translation="PPPPPPASGPPISFRDEVIPWLDDGVGTDDQEDEEDEVIDVSGL
                     FGDSDLIDAGVTSGADPTAWDPIGIDRRPDSPGNSGGGKPD"
     gene            327..>1882
                     /gene="parC"
                     /locus_tag="VHN55_05005"
     CDS             327..>1882
                     /gene="parC"
                     /locus_tag="VHN55_05005"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008070823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEX2803326.1"
                     /translation="MAHEASDSVIETPFDAALSERYLVYALSTITARSLPDVRDGLKP
                     VHRRLLWAMRLLRLDPAGAFKKSARVVGDVIGKYHPHGDQSVYDAMVRLAQDFALRYP
                     LVDGQGNFGNIDGDNAAAYRYTEARLTAVAMQLMAGVDEGTVDFRATYNGEEEEPEVF
                     PGLFPNLLANGASGIAVGMATSIPPHNVGELIDAAVYLIDNPRAENRALTDFVGGPDF
                     PTGGVLVDSGQSIADAYATGRGSFRLRASVSQEKEKGGSWHLLVSEIPYGVQKGKLIE
                     QIAALIADKKLPILADVKDESAEELRLILEPRSRTVDPELLLESLYRLTDLEIRFPLN
                     LNVLDATRTPLVMSLKESLAAWLEFQFQVLVRRSQVRIGKIDDRVEILDGFLIAFLNL
                     DRVIEIIRTEDEPKPVLMAEFSLSDRQAEAILNMRLRSLRKLEEMEIGREREALAKER
                     DELARLVESPARQRTRLKRDLAAVKEKFGDTRRTRIEEGAAPREIDWSAMIDKEPITV
                     ILSQRGWIRA"
BASE COUNT          356 a          587 c          624 g          315 t
ORIGIN      
        1 tccgccaccg ccgccgccgg cttcgggccc gccaatctcg ttccgcgacg aagtcatccc
       61 gtggctggac gacggcgtcg gcacggacga tcaggaagac gaggaagatg aggtcatcga
      121 tgtgtcgggc ttgttcggcg acagcgatct catcgacgcg ggcgtgacca gcggcgccga
      181 tcctacggcg tgggacccga tcggaatcga ccgcaggccc gacagtccgg gcaattctgg
      241 gggcggcaag ccggattagc cgctccggcc tcagatcccc cgccgaacca gtggcaagag
      301 ctccccggcc ttgctagcga gcgcggatgg cccacgaagc aagcgattcc gtaatcgaaa
      361 ccccattcga tgccgccctt tcggagcgct atctcgtcta cgcgctgtcg acgatcaccg
      421 ctcgctcgct tcccgacgtc agggacgggc tgaagccggt tcaccggcgg ttgctctggg
      481 cgatgcggct gcttcggctc gaccccgccg gcgcgttcaa gaaatcggct cgggtcgtcg
      541 gcgatgtgat cggcaaatat cacccgcatg gcgaccagag cgtctacgac gcgatggtcc
      601 ggctcgcgca ggatttcgcg ctccgctatc cgctcgtcga cgggcagggc aatttcggga
      661 acatcgacgg cgataatgcc gctgcgtacc gatataccga ggcgcggctg accgccgtcg
      721 cgatgcagct gatggccggc gtcgacgaag gcaccgtcga ctttcgagcg acttacaatg
      781 gcgaggagga ggagcccgag gtcttccccg ggctgttccc gaacctgctc gccaacggcg
      841 ccagcgggat cgcggtcggg atggcaacgt cgattccgcc gcacaacgtc ggcgagttga
      901 tcgatgccgc ggtctacctg atcgacaatc cgagggccga gaacagggcg ctcacggatt
      961 tcgtcggagg gcccgatttc ccgaccggcg gagtgctggt cgacagcggc cagtcgattg
     1021 cggacgctta tgcaaccggt cgtggctcgt tccgcctccg ggcatcggtt tcgcaggaga
     1081 aggagaaggg cggatcctgg cacctgctcg tcagcgaaat cccgtatggg gtgcagaagg
     1141 gcaagctgat cgagcagatc gctgcgctca ttgccgacaa gaagcttccg atcctcgccg
     1201 acgtgaagga cgagagcgcg gaagagctgc ggctcatcct cgagccgagg agccggaccg
     1261 tcgatcccga gctgctactc gaaagcctgt accgcctgac cgatctcgag attcggtttc
     1321 cgctcaatct caacgtgctg gacgcgacgc gaacgccgct ggtgatgagc ctgaaggaat
     1381 cgcttgcggc gtggctcgaa ttccagttcc aggtgctcgt tcgaaggagc caagtgcgga
     1441 tcgggaaaat cgacgaccgg gtcgagattc tcgacggttt cctaatcgcc ttcctgaacc
     1501 tcgatcgagt catcgaaatc atccgcaccg aagacgaacc gaaaccggtg ctcatggcag
     1561 aattttcgct gtcggaccgg caggcggaag cgatcctgaa catgcgcctg cggtcgttgc
     1621 gcaagctcga agagatggaa atcggtcgcg agcgcgaggc gcttgcgaag gagcgcgacg
     1681 agctggccag gctcgttgag agcccggctc gtcagcgaac ccggctcaag cgcgatcttg
     1741 ccgcggttaa ggagaagttc ggggacaccc gccgcacgcg catcgaagag ggggctgcgc
     1801 cgcgcgagat cgactggtcg gcgatgatcg acaaagagcc gatcaccgtg atcctgtcgc
     1861 agcgcggctg gatccgggca at
//
LOCUS       DATAKH010000117         5825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_37381,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000117 DATAKH010000000
VERSION     DATAKH010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5825
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37381"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1635)
                     /gene="uvrB"
                     /locus_tag="VHN55_05010"
     CDS             complement(<1..1635)
                     /gene="uvrB"
                     /locus_tag="VHN55_05010"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEX2803327.1"
                     /translation="MAIQIRTTLAEPETGETFVPHKPARPEKAEGGKKFVLNSEYEPA
                     GDQPQAIKELTEAAADGERSQVLLGVTGSGKTFTMAKVIETLQRPALVIAPNKILAAQ
                     LYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSVNEAIDRMRHSATRSL
                     LERDDVIIVASVSCLYGIGSVETYSAMTFSLKKGQNADQREVIRKLVALQYRRNDQAF
                     ARGAFRVRGDNLEIFPSHYEDRAWRVSFFGDEIEEIVEFDPLTGKKAASLDSIKVYAN
                     SHYVTPGPTLKQAMEAIRHELAERLKELQAEGRLLEAQRLEQRTNFDLEMIAATGSCA
                     GIENYSRFLTGRLPGEPPPTLFEYLPDNALLFIDESHQTVPQIGAMARGDHRRKITLA
                     EYGFRLPSCIDNRPLRFNEWDAMRPQTTFVSATPGPWEINETGGVFSEQVIRPTGLID
                     PPVEIKPVEDQVDDLVNEAKLTAKKGYRTLVTTLTKRMAEDLTEYLHEAGLRVRYMHS
                     DVETLERIELIRDLRLGVYDVLVGINLLREGLDIPEC"
     gene            1704..2252
                     /locus_tag="VHN55_05015"
     CDS             1704..2252
                     /locus_tag="VHN55_05015"
                     /inference="COORDINATES: protein motif:HMM:NF023696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 domain-containing protein"
                     /protein_id="HEX2803328.1"
                     /translation="MTKRAILLLSLALPLAACGPEPEVDEKNASVEEVTEKVREASDE
                     AGVISPGKWVSTVKIDEMDLPGMPPQAAEQMQKMIAETRTTETCLTPEEARQPKATFF
                     SGNDQCRYDHFTMGGGKIDAQMRCSQGGATQIMEMAGTYAPDHYRMQMKSRTQDGRDD
                     DGMSMQMTVDAKRVGACTGKET"
     gene            2274..2792
                     /locus_tag="VHN55_05020"
     CDS             2274..2792
                     /locus_tag="VHN55_05020"
                     /inference="COORDINATES: protein motif:HMM:NF023696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 family protein"
                     /protein_id="HEX2803329.1"
                     /translation="MRMIGIAAAAALVSACGNSGQEAQAEAVAAALQPGEYELGWTDI
                     KRTDADKKGAGEGASEAAATFADRTCIAAGGKIEPSAFAEKGDDCHAVQSYVRNGIVN
                     VQLTCERKDGKLSSMVTGKFTAESLDADVETTTSFEGKGNYTLTRKVTAKRIGDCPAT
                     AETATAGEASES"
     gene            2818..3690
                     /locus_tag="VHN55_05025"
     CDS             2818..3690
                     /locus_tag="VHN55_05025"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX2803330.1"
                     /translation="MKTAIFVNRGGGSVGDRQPVARALRDAGIAGEPQWLDGSKIPEA
                     AAAAVADGAELVIAGGGDGTVSAAAGALAGTQSVLGVLPLGTLNHFARDLGIPLDLAD
                     AAKLIAEGKSRKVDLGEVNGRTFINNSAIGIYPLMVLDRDSQQMRMGRSKRLAMAVAA
                     ARTLLRFSSRTLTLTVNETSAHVDTPLLFVGNNAYRLELPRAGTRERLDGGELSVVVL
                     RRKSRLGFCAATLRALVGRRRPTDVASLEKVRQLRVDSGRPVLTISLDGETERMPTPL
                     TYRIRPKALAVIAP"
     gene            3747..4529
                     /locus_tag="VHN55_05030"
     CDS             3747..4529
                     /locus_tag="VHN55_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2803331.1"
                     /translation="MDLFHAVAGFFVGLLVGLTGVGGGSLMAPILILLFGVAPTTAIG
                     TDLWFAGITKTVGGAIHHIKSTADLLVVRRLMTGSIPAAIVTLVVLNAMHWSQVKHGW
                     LPFALGLVLLVTATATLARPALHRWVVARSDGGQVTPPPMQVPLTVLAGAVLGVLVTL
                     TSIGAGALGATLLVFLYPVRLNTKQIVGTDIVHAIPLTFVAGIGHLVIGSVDGGLLLN
                     LLIGSIPGIIVGSLLVHRVSEKLVRIALSFVLVFAGARLLVA"
     gene            4838..>5825
                     /locus_tag="VHN55_05035"
     CDS             4838..>5825
                     /locus_tag="VHN55_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017672292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide reductase N-terminal alpha
                     domain-containing protein"
                     /protein_id="HEX2803332.1"
                     /translation="MDFTTGNEVPTDDVTASAPSSKSVAAPAYPVTTDPSRDELLTEF
                     GKDTLRDRYLLPGEGNQDLFARVASAYADDAEHAQRIYDYISKLWFMPATPVLSNGGT
                     GRGLPISCYLNSVSDSLEGIVGTWNENVWLASRGGGIGTYWGHVRGIGEPVGLNGKTS
                     GIIPFVRVMDSLTLAISQGSLRRGSAACYLDINHPEIEEFLEIRKPSGDFNRKALNLH
                     HGVLITDEFMEAVREGAEFELKSPKDGSVRSTVDARALFQKLVETRLATGEPYIIFID
                     QVNRSMPKHHRDLGLKVTTSNLCSEITLPTGRDHLGADRTAVCCLSSLNLETW"
BASE COUNT         1030 a         1896 c         1892 g         1007 t
ORIGIN      
        1 gcattcggga atgtcgagcc cctcgcgcag caaattgatg ccgacgagca cgtcatagac
       61 cccgagcctc aagtcgcgga tcagctcgat gcgttccagc gtctcgacgt ccgagtgcat
      121 gtaacggacg cgcagccccg cctcgtggag gtattcggta aggtcctcgg ccatccgctt
      181 ggtcagcgtc gtgaccaggg tccgatagcc cttcttggcg gtcagcttgg cctcgttgac
      241 gaggtcgtcg acctggtcct cgaccggctt gatctcgacc ggcgggtcga tgaggccggt
      301 cgggcggatc acctgctcgg agaacacgcc gcccgtctcg ttgatctccc acggaccggg
      361 ggtggccgag acgaacgtcg tctgcgggcg catcgcgtcc cattcgttga agcgtagcgg
      421 cctattgtcg atgcagctcg gcagccggaa tccgtactcg gccagcgtga tcttccgccg
      481 gtggtcgccg cgcgccatcg ccccgatctg cggcaccgtc tggtggcttt cgtcgatgaa
      541 caggagcgcg ttgtcgggga gatattcgaa cagggtcggc ggcggctcgc cggggaggcg
      601 gccggtgagg aagcgcgagt agttctcgat cccggcgcag cttccggtcg cggcgatcat
      661 ctctaggtcg aaatttgtcc gctgctcaag ccgttgcgct tcgagcagcc gcccttccgc
      721 ctgcaattcc tttaatcgct cggcgagctc atggcggatc gcctccatcg cctgcttcaa
      781 ggtcgggcca ggggtcacat agtgcgagtt ggcgtagacc ttgatgctgt cgaggctcgc
      841 agccttcttt ccggtcagcg ggtcgaactc gacgatctcc tcgatctcgt cgccgaagaa
      901 cgacacgcgc cacgccctgt cctcataatg cgaagggaag atctcgagat tgtcgccgcg
      961 cacccgaaag gcgccgcggg cgaacgcctg gtcgttgcgg cggtactgaa gcgcgaccag
     1021 cttgcggata acttcgcgct ggtcggcgtt ctggcccttc ttcagcgaaa aggtcatcgc
     1081 cgaataggtt tcgaccgagc cgattccgta caggcacgac accgaggcga cgatgatcac
     1141 gtcgtcgcgc tccaggagcg accgggtcgc cgagtggcgc atccggtcga tcgcctcgtt
     1201 cacgctcgac tccttctcga tataggtgtc ggttcgcggc acgtaggctt cgggctggta
     1261 gtaatcgtag tagctgacga aatattcgac ggcattgtct gggaagaagc tcttgaactc
     1321 gccgtagagc tgcgcggcga ggatcttgtt gggcgcgatc accagcgccg gccgctgcag
     1381 cgtttcaata accttggcca tggtgaaggt cttgcccgag ccggtcactc cgaggagcac
     1441 ctggctcctc tcgccgtcgg ccgcagcttc ggtcagttcc ttgatcgcct gcggctggtc
     1501 cccggcaggc tcatattccg aattgagcac gaacttcttc ccgccctcgg ccttctccgg
     1561 ccgcgcaggc ttgtgcggaa cgaaggtctc gccggtttcg ggctccgcca gcgtcgttcg
     1621 gatttgaatc gccatcgcaa gcgcatatgg tggagccggg aaacaggcgc aacgcgccgc
     1681 gtatcaacag gggatcccga gtcgtgacca agcgcgcaat ccttctgctc agcctggctc
     1741 tcccactggc cgcctgcggg ccggagcccg aggtcgacga gaagaacgcc agcgtcgagg
     1801 aagtgaccga gaaggtccgc gaggcttccg acgaggccgg cgtgatcagc ccgggcaagt
     1861 gggtgtccac cgtgaagatc gacgagatgg acttgcctgg aatgccgccg caggccgcgg
     1921 agcagatgca gaaaatgatc gccgagacgc gcaccacgga aacctgcctg acgcccgagg
     1981 aggcgaggca gcccaaggcg accttcttct cgggcaacga ccagtgccgc tacgatcatt
     2041 tcacgatggg cggcggcaag atcgatgcgc agatgcgctg cagccagggc ggcgcgactc
     2101 agatcatgga aatggcgggg acctacgcac cggaccatta ccggatgcag atgaagtcgc
     2161 gcacgcagga cggcagggat gacgatggga tgtcgatgca gatgacggtc gacgcgaaac
     2221 gcgtcggcgc ctgcacgggc aaggagacct gagcgagaga gggggaagtg accatgcgta
     2281 tgattgggat cgcggcggcg gccgcactgg tgagcgcctg cggaaactcg gggcaggagg
     2341 cgcaggccga ggccgtcgcg gcggcgcttc agccaggcga atatgagctt ggctggaccg
     2401 acatcaagcg caccgacgcc gacaagaagg gtgccggcga gggggcaagc gaagccgccg
     2461 cgacattcgc ggatcgaacc tgcatcgccg ccggcggcaa gatcgagccc tccgcattcg
     2521 ccgaaaaggg tgacgactgc cacgcggtcc agagctatgt ccgcaacggt atcgtcaacg
     2581 tccagctgac gtgcgagcgg aaggacggca aattgtcgtc gatggtgacc ggcaagttca
     2641 ccgccgaatc gctcgacgcg gatgtcgaga cgacaaccag cttcgagggt aagggcaatt
     2701 ataccttgac ccgcaaggtc accgccaagc ggattgggga ctgccccgct acggcggaaa
     2761 ccgcaaccgc cggcgaggcg agcgagtcat aaatgccgct cgcgcgttag cgcgcggatg
     2821 aaaacggcaa tattcgtcaa ccgcggcggc ggatctgtcg gcgatcggca gccggtcgct
     2881 cgtgccttga gggacgcggg aatcgcaggt gagccgcaat ggctcgacgg ttcaaagatc
     2941 cccgaggcag ccgcggccgc ggtcgccgat ggagccgagc tggtcatcgc cggcggcggc
     3001 gacggcacgg tcagcgcggc cgccggcgcg ctcgccggca cgcaatccgt gctcggggtc
     3061 ctcccgctcg ggacgctcaa ccatttcgcc cgcgacctcg gaattccgct cgacctcgcc
     3121 gacgccgcga agctgatcgc cgaagggaaa agccgcaagg tcgacctggg cgaggtcaat
     3181 ggccgaacct tcatcaacaa cagcgccatc ggaatctatc cactgatggt gctcgaccgt
     3241 gactcgcagc aaatgcggat gggacggagc aagcggttgg cgatggcggt cgcggctgcg
     3301 cgcactctgc ttcgcttttc cagccgcact ctgacgctga cggtcaacga gacgagcgcc
     3361 cacgtcgaca cgccgctgct gttcgtcggc aacaacgcct accggctcga gctaccccgc
     3421 gccggaacgc gggaacggct cgacggcgga gagctgtcgg tggtcgtgct caggcgcaag
     3481 tcgcggctcg gcttttgcgc cgcgaccctc cgtgcgcttg ttggccggcg ccggccgacc
     3541 gacgtggcca gcctggagaa ggtgcgccag ctgcgcgtcg attccgggcg accggtgctg
     3601 acgatctcgt tggacggcga gacggagcgg atgccgacac cgctcaccta ccgaatccgg
     3661 ccgaaggcgc tggcggtcat cgcgccgtga aagcggagcc attgaagctt ctccccaagt
     3721 ccgtgaacgc gtgctagcgg cgcgcgatgg acctgtttca cgccgtcgcc ggcttcttcg
     3781 tcggcttgct tgtcggatta accggcgtcg gcggcggctc gctgatggcg ccgatattga
     3841 ttctcctgtt cggggtggcc ccgacgacgg cgatcggtac cgacctgtgg ttcgccggaa
     3901 tcacgaagac cgtcggcggc gccatccacc acatcaagag cactgccgat ctcctcgtcg
     3961 tccggcggct gatgacgggg agcatccccg cggcaatcgt cacgctcgtc gttctcaacg
     4021 cgatgcactg gagccaggtt aagcacggct ggcttccatt cgcgctcggc ctggtgctcc
     4081 tggttacggc tacggcaacg ctggcccggc cggcgcttca ccgctgggtg gtcgcccgat
     4141 cggatggcgg acaagtcact ccaccgccaa tgcaggtccc gcttacggtc cttgccggcg
     4201 cggtcctcgg agtgctcgtg actttgacct cgatcggggc tggcgcgctt ggggcgacac
     4261 tgctcgtctt cctctacccg gtccggctca acaccaagca gatcgtcggc accgacatcg
     4321 tccatgcgat cccgctgacc tttgtcgccg ggatcggcca cctggtcatc ggaagcgtcg
     4381 acggcgggct tctcctcaac ctgctgatcg gatcgatccc gggaatcatc gtcggctcgc
     4441 tgctcgtcca ccgagtgagc gagaagctgg tcaggatcgc gctgtccttc gtcctcgtgt
     4501 tcgccggcgc ccggctgctc gtcgcctgaa gcgcgctgtt gcgctgctgc aaatccacag
     4561 gaaatttgct tcacatcgca tttacccgct tgcatcccgc gcccattgag gcacaatagg
     4621 tagtagcgcg ggaggggggg acactcaact gctggtgttc ggcgccggaa tagctatatt
     4681 ccggtgacgg acgaactcgt ccccgatttc cacagggcgg cgccatggca aaccccctcc
     4741 cggcgctgca aagtgactcg tctcgacggc gtcgaacgag tagaacgatt agagaacatc
     4801 cggctccagc gagtcggcaa gcgacggggt aagcgcgatg gatttcacga ccggcaatga
     4861 agttcctacc gacgacgtca cggcctccgc gccgtcgagc aagagcgtcg cggcgccggc
     4921 ctatccggtg accaccgacc cgtcgcgcga cgagcttttg accgagttcg gcaaggacac
     4981 gcttcgcgac cgctacctgc ttccgggcga aggcaaccag gatctgttcg cgcgcgtcgc
     5041 ctcggcctat gcagacgacg ccgagcacgc ccagcgcatc tacgactata tctcgaagct
     5101 gtggttcatg ccggcgaccc cggtcctgtc gaacggcggc accggccgcg ggcttccgat
     5161 cagctgctat ttgaacagcg tttccgacag cctcgagggc attgtcggca cctggaacga
     5221 gaatgtctgg cttgccagcc gcggcggcgg catcggcacc tactggggcc atgtccgcgg
     5281 aatcggcgaa cctgtcggcc tcaacggcaa gaccagcgga atcattccgt tcgtccgggt
     5341 gatggactcg ctgacgctgg cgatttcgca gggttcgctc cggcgcgggt cggcggcctg
     5401 ctacctcgac atcaaccacc cggaaatcga ggaattcctc gaaatccgca aaccgtcggg
     5461 cgacttcaac cgcaaggcgc tcaacctcca ccacggcgtg ctgatcaccg acgagttcat
     5521 ggaagcggtc cgcgagggcg ccgagttcga gctgaaatcg cccaaggacg gcagcgtccg
     5581 atcgaccgtc gacgcccgcg ccctgttcca gaagctggtc gagacccggc ttgcgaccgg
     5641 cgagccctat atcatcttca tcgaccaggt gaaccggtcg atgcccaagc accaccgcga
     5701 cctcgggctc aaggtgacga cctccaacct gtgctcggag atcacccttc cgaccggccg
     5761 cgaccatctc ggcgccgacc gcaccgcggt ctgctgccta agctccctca acctcgagac
     5821 ctggg
//
LOCUS       DATAKH010000118         5543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21283,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000118 DATAKH010000000
VERSION     DATAKH010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5543
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21283"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VHN55_05040"
     CDS             complement(<1..320)
                     /locus_tag="VHN55_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010403931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEX2803333.1"
                     /translation="MTSTATFARDSAAPASAREAVRAGDDKAMLKAAADLTRDLNSPS
                     AAIYWGDLLVSALIGYGALAAAILLPSWPLALVAGTVAVLALYRAGSFIHELTHLKPR
                     AVPG"
     gene            452..1591
                     /locus_tag="VHN55_05045"
     CDS             452..1591
                     /locus_tag="VHN55_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEX2803334.1"
                     /translation="MAAQLTIRPVETKAERKVFVDLAWDVYRDDPAWVPPLKDEVHGL
                     ITPGKNPWFEHARAMFWLAERGGKPVGRISAQVDELVLQHMGQGTGQWGMFEALDGEA
                     AAALIATAEDWLREQGMTRALGPISLSIWDEPGLEIEGFEQPPTAMMGHHKPEYRQWI
                     EAAGYEKAKDLLTYEVDIAHWADPKIERLIAMGERNSKIRIRKVDKSRFDEEARIILN
                     LLNDAWSGNWGFVPLTESEIAYAGKKLKPIIYNELVRIAEYDGEPVAFMITLPDINEL
                     IRDLNGELFPFGWMKLLWRLRKPRTRRARVPLMGVAKKLHTSRLASQLAFMLIEYTRR
                     DCVGKFGIGTGEFGWILEDNRGMLSIAELPGAYVNHRYRIFEKAL"
     gene            complement(1588..2361)
                     /gene="xth"
                     /locus_tag="VHN55_05050"
     CDS             complement(1588..2361)
                     /gene="xth"
                     /locus_tag="VHN55_05050"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX2803335.1"
                     /translation="MKIASYNLNGIRARLPRLLEWLEREKPEIVCLQELKCADESLPI
                     EDIEGAGYGAVWHGQKGFNGVAVLARGDAPKLRRTGLPGDPDDTHSRYIEAEVDGVVV
                     ASLYLPNGNPVGTEKFDYKIRWFERLRERAAQLLQEERPVVLAGDWNVVPEDRDVFSV
                     SATAHDAVMQPEARQVWRTMLGQGWTDALRALHPDEPKLYTFWDYTAGCWQRDLGFRL
                     DHLLCSPEAADRLKGAGVDKWARAQEKASDHAPTWVELA"
     gene            complement(2406..2738)
                     /locus_tag="VHN55_05055"
     CDS             complement(2406..2738)
                     /locus_tag="VHN55_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEX2803336.1"
                     /translation="MTQPDISLTQNAARRVAAIAARKNAPPVLRLAVDGGGCAGFTYS
                     FELAEAPAPEDAVAETDGVKLVVDPASLELVRGSAVDFVEDLGGAAFRVTNPNAQSGC
                     GCGSSFSV"
     gene            complement(2784..3725)
                     /locus_tag="VHN55_05060"
     CDS             complement(2784..3725)
                     /locus_tag="VHN55_05060"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2803337.1"
                     /translation="MAQLLAISQKVFSDREFFIHDGQRLRRFRLSAPVQALFFFISLF
                     LVGWSTYSAAQLIAGPAAQRAVVVPYAAQLKKLAAETDRRVQLVEQRQFALAAALEAR
                     DVDPETLKSLGFYPAAAGTGAIGGPLDSGNGDPTFKQLFTNWKKLDTLASGAIAIPSE
                     KPVQTAEFTSAFGVRSDPFRRGAAMHAGIDLAGPVGTPIHATADGTVIRAGWNSGGYG
                     NLIEIDHGRGIVTRYGHLSKINVNPGDRVNRGAVIGRMGSTGRSTGSHLHYEVRIDDS
                     PVNPIPFMRSTDYLMAMKRAGNAPSMDQVALGGPGSK"
     gene            4091..5224
                     /locus_tag="VHN55_05065"
     CDS             4091..5224
                     /locus_tag="VHN55_05065"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017667593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEX2803338.1"
                     /translation="MTIKPARKPARPSFSSGPCPKPPGWSLDSLDTRALGRSHRSALG
                     KARLAEAIERTHALLRLPSDYRLGIVPASDTGAMEMAIWSLLGPRPVTMLAWESFGAG
                     WVSDVAKQLKLDADIRTAPYGGIADLSRIDPANDIVFTWNGTTSGVRVPDGEWIAGDR
                     TGLTICDATSGAFAQDIDWQKIDVGTFSWQKALGGEAAHGMLVLSPRAVERLESEPPP
                     RPLPKIFRLTKGGKLIDGIFRGETINTPSMLCVEDWLMALDWAENIGGLGALIARADA
                     NSAALDRWVRSADWIEHLAADERIRSNTSVCLQFADRSDEEANTARQKAIVNLLEGEE
                     AAFDIGAYRDAPPGLRIWCGATVETTDSEALTPWLDWAWETTK"
     gene            5221..>5543
                     /locus_tag="VHN55_05070"
     CDS             5221..>5543
                     /locus_tag="VHN55_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010238777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEX2803339.1"
                     /translation="MSGQVRVLVADKMDPRAAAIFRDRGIEVDEKPGLSPDELKAIIG
                     DYDGLAVRSSTRVTAAVMDAALPRLKVIGRAGIGVDTIDVPAASARGIVVMNTPFGNS
                     ITTAE"
BASE COUNT         1018 a         1791 c         1841 g          893 t
ORIGIN      
        1 aagccgggca ccgcgcgcgg cttcagatgg gtgagctcgt ggatgaagct cccggcgcga
       61 tagagggcga ggacggcgac ggtgcccgcg acaagcgcca gcggccacga cgggaggagg
      121 atcgcagcgg caagcgcgcc atagccgatg agcgccgaca ccagcaggtc gccccaatag
      181 atggcagcac tgggtgaatt gaggtcgcgg gtcaggtcgg cggcagcctt cagcatcgcc
      241 ttgtcgtcgc ccgcgcgcac ggcttcgcgc gccgatgcgg gcgcggcgct atcgcgcgcg
      301 aatgttgccg tactggtcat aagtctctgc ctctgcaggg agatagtggc gcgatcatgg
      361 cgcatcaatg aatgcgcgca gccagcggga agcatcgcgg gcacattcat aagggctggc
      421 ccttgcttcg ggtgcgggct agccagccgc tatggcagcg cagctaacca tccgccccgt
      481 cgagactaag gccgagcgaa aggttttcgt ggacctcgcc tgggacgtgt atcgcgacga
      541 ccccgcctgg gtcccgccgc tgaaggacga ggtccacggc ctgatcacgc cgggcaagaa
      601 cccgtggttc gagcatgcca gggcgatgtt ctggctggcg gagcgcggcg gaaagcccgt
      661 cggccggatc agcgcccagg tcgacgaact cgtcttgcag catatgggcc agggcaccgg
      721 ccaatggggc atgttcgagg cgctcgacgg cgaggctgcc gcggccctga tcgcgaccgc
      781 ggaggattgg cttcgcgagc agggcatgac ccgggcgctc gggcccatca gcctgtcgat
      841 ctgggacgaa cccgggctcg agatcgaggg cttcgagcag ccgcccaccg cgatgatggg
      901 gcatcacaag cccgaatatc gccagtggat cgaggccgcg gggtacgaaa aggccaagga
      961 cctcctcact tacgaagtcg acatcgccca ctgggccgat cccaagatcg agcggctgat
     1021 cgcgatggga gagcgcaatt ctaaaattcg catccgcaag gtcgacaagt cgcggttcga
     1081 cgaggaagcg cggatcatcc tcaatctctt gaacgacgct tggtcgggga actggggctt
     1141 cgtcccgctg accgagagcg agattgccta tgccggcaag aagctgaaac ccatcatcta
     1201 caacgagctg gtgcggatcg ccgaatatga cggcgagccg gtcgccttca tgatcaccct
     1261 tcccgacatc aacgaactga tccgggactt gaacggtgag ctattcccat tcggctggat
     1321 gaagctgtta tggcgcttga ggaaaccgcg cacgcgccgc gcccgggtcc cgctcatggg
     1381 ggtggcgaaa aagctgcaca ccagccgcct cgcctcgcag ctcgccttca tgctgatcga
     1441 atatactcgc cgcgactgcg tcgggaaatt cggcatcggc accggcgagt tcggctggat
     1501 cctcgaggac aatagaggaa tgctctcgat cgccgaacta cccggcgcct acgtcaatca
     1561 ccgctaccgg attttcgaga aggcgctcta agccagctcg acccacgtcg gcgcgtggtc
     1621 ggaggccttc tcctgcgccc gcgcccactt gtcgactccc gctcccttca gccggtcggc
     1681 cgcctcgggc gagcacagca ggtggtcgag gcggaagccg aggtcgcgtt gccagcagcc
     1741 cgccgtatag tcccagaagg tgtaaagctt cggctcgtcg ggatgcagcg cccgaagcgc
     1801 gtcggtccag ccctggccaa gcatggtccg ccagacctga cgagcttcgg gctgcataac
     1861 cgcgtcatgc gcggtcgcgc tcaccgaaaa gacgtcgcgg tcctcgggca ccacgttcca
     1921 gtctccggcg aggaccaccg ggcgctcttc ctgaagcagt tgggcagcgc gctcgcgcag
     1981 gcgctcgaac caacggatct tatagtcgaa cttttccgtc ccgaccggat tgccgttggg
     2041 caggtagagc gaggcgacga cgactccatc cacctcggcc tcgatatagc ggctgtgggt
     2101 gtcgtcggga tcgccgggaa ggccagtccg ccgcagcttg ggagcgtcgc cccgggcaag
     2161 caccgcgacc ccgttgaaac ctttctgccc gtgccacacg gcgccgtaac cagccccctc
     2221 gatgtcctcg atcggcagag actcatcggc gcatttcaat tcctggaggc agacgatttc
     2281 gggcttctca cgctcgagcc attcgagaag acgcggcagc cgcgcccgga ttccgttcag
     2341 gttgtaagaa gcgattttca cggaaccgcc ctagccgctt gccccgagcg aagtcgagaa
     2401 gttggtcaga ccgaaaagct cgatccgcag ccgcaaccgg actgcgcgtt gggattggtc
     2461 acccggaatg cggcgccgcc gagatcttcg acgaaatcga ccgcggaccc gcgcaccagc
     2521 tcgaggctgg ccgggtcgac gacgagcttg acgccgtcgg tctcagcgac cgcgtcctcc
     2581 ggagcggggg cctcggcgag ttcgaagctg taagtgaagc cggcacagcc accgccgtcg
     2641 acggcgaggc ggagcaccgg cggcgcgttc ttgcgagcgg cgatagccgc gacacgccgc
     2701 gcggcattct gcgtcaggct gatatcaggc tgcgtcacgc agctgaaata gggtgccggc
     2761 tggggagcgg caaccgcagg tggttatttc gagccgggtc cgccgagcgc aacctggtcc
     2821 atcgagggcg cattgcctgc gcgcttcatg gccatcaggt aatctgtcga gcgcatgaag
     2881 gggatcgggt tgacggggct gtcgtcgatc cggacctcgt aatgcaggtg cgaaccggtc
     2941 gagcgaccgg tcgagcccat ccggccgatc actgcaccgc ggttgacccg gtcgccgggg
     3001 ttcacgttga tcttcgacag atggccgtag cgagtgacga ttccgcggcc gtggtcgatc
     3061 tcgatcaaat tgccgtagcc gccgctattc cagccggcgc gaatgacggt gccgtccgca
     3121 gtcgcgtgga tcggcgtgcc gaccggaccg gcaagatcga ttccggcatg cattgcggca
     3181 ccgcggcgga acgggtcgga acgaactccg aaagcactgg tgaattcagc tgtctgcacc
     3241 ggcttttccg aaggaatcgc gatcgctccg ctggcgagcg tgtcgagctt cttccagttc
     3301 gtgaacagct gcttgaacgt cgggtcccca ttgccggagt ccaacggccc gccgatggcg
     3361 ccggtgcccg ccgcggccgg gtagaaacca aggctcttca gcgtctcggg atcgacgtcg
     3421 cgggcctcga gcgcggcggc aagcgcgaac tggcgctgct cgacgagctg gacacggcga
     3481 tccgtctcgg ccgcgagctt tttgagctgg gctgcataag ggacgaccac agccctctgc
     3541 gctgccggtc cggcgattag ctgggcggcc gaataggtcg accagccgac gaggaagagg
     3601 gagatgaaga agaagagtgc ctgaacggga gccgagaggc ggaagcggcg aagcctttgc
     3661 ccatcgtgga tgaagaattc gcgatcgctg aaaacttttt gcgatatcgc cagcaattgc
     3721 gccatgtccc gctccaacaa accgtacggc gcgcatgcct tggctgcgcg ctcgaaaaac
     3781 catcgatgaa ggagctcccc agcccctggt ggcacaggcg gaaaactccc cccgctcgtg
     3841 ccggaggcga aactcactcg tcctggttaa caaattcaac ctgaaatgcc gcttcccggg
     3901 acgaaccgtc cggctcctgc ggtgaattga agctgcaggg ggccgaaggg acggaaccga
     3961 cgtcgtttgg gccgcgcaat tccgccgaat cttcctcggc gatgccttgc caacggctgg
     4021 gcgatcctta caccagccag cgggccacgc cgtcccaacg cggcgcgcgc tctctgcgag
     4081 gagagttcat gtgacgatca agccggcgcg gaaacccgcg cgtccctcct tttcatctgg
     4141 gccctgcccg aagccgcccg gctggtcgct cgattcgctc gacacgcgag cgctcggccg
     4201 ctcgcaccgg tcggcgctgg gcaaggcccg gctcgccgaa gcgatcgaac ggacgcacgc
     4261 tttgcttcgg ctcccctccg actatcggct cgggatcgtg cccgcgtcgg acaccggcgc
     4321 gatggaaatg gcgatctggt cgctgcttgg gccaaggccg gtaacgatgc tcgcatggga
     4381 gagcttcggc gccggttggg tcagcgatgt cgccaagcag ctcaagctcg acgccgacat
     4441 ccgcacagcc ccctatggcg ggatcgcgga cctgtcgcgg atcgacccgg cgaacgatat
     4501 cgtctttacc tggaacggaa cgaccagcgg agtgcgcgtt cccgacggcg aatggatcgc
     4561 cggcgatcgc accggcctca ccatctgcga cgccacttcc ggcgccttcg cccaggacat
     4621 cgactggcaa aaaatcgatg tcggcacgtt cagctggcaa aaagcgctgg gcggcgaggc
     4681 cgcgcacgga atgctggtcc tcagcccccg cgctgtcgaa aggctcgaaa gcgagccgcc
     4741 gccgcgcccg cttccgaaaa tcttccggct gacgaaaggc gggaagctga tcgacggaat
     4801 tttccggggc gagaccatca acacgccctc gatgctttgc gtcgaggact ggctgatggc
     4861 actcgactgg gcggagaata tcggcggcct cggcgcgcta atcgcccggg ccgatgccaa
     4921 ttccgcggcg ctggaccgct gggtgcggtc ggcggactgg atcgagcatc tggccgcgga
     4981 tgagcggatc cggtcgaaca catcggtttg cctccagttc gccgaccgct ccgacgagga
     5041 ggcgaacacg gcccggcaga aagcgatcgt caacctgctc gagggagaag aagccgcgtt
     5101 cgacatcggc gcctaccgcg atgctccgcc ggggcttcga atctggtgcg gggcgacggt
     5161 cgaaaccacc gacagcgagg cgctgacgcc gtggctggac tgggcttggg agacgacgaa
     5221 atgagcgggc aagtgcgcgt tcttgttgcc gacaagatgg acccgcgggc agctgccatc
     5281 ttccgcgacc gcggcatcga agtggatgag aagcccggcc tttcgcccga cgagttgaag
     5341 gcgatcatcg gcgactatga cggtctcgcg gtccgcagct cgacgcgcgt gacagcggcg
     5401 gtcatggacg ccgcgctacc tcgcctgaaa gtgatcggcc gagccgggat cggggtcgac
     5461 acgatcgacg tccccgccgc ctcggcgcgc gggatcgtgg tcatgaacac cccgttcggc
     5521 aactcgatca ccaccgccga gca
//
LOCUS       DATAKH010000119         1824 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_37401,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000119 DATAKH010000000
VERSION     DATAKH010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37401"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VHN55_05075"
     CDS             complement(<1..663)
                     /locus_tag="VHN55_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEX2803340.1"
                     /translation="MVEQDYYELLGVPRGADLHTIKSAYRRLAKEHHPDRHNGCTEQE
                     ARFKAISEAYDVLKDPQKRAAYDRFGKAAFQNGGGGGQDPFGSAGFDGFSDIFSSIFG
                     DFMDRSGGARANPARGADLRYDLELSLEEAFAGKEATVTVDALGKCETCHGHGCAEAA
                     NCARTCNTCGGMGKVRAQQGFFVVERGCPTCRGSGEVISDPCRACEGEGRTLNKRKLT
                     VKI"
     gene            complement(716..>1824)
                     /locus_tag="VHN55_05080"
     CDS             complement(716..>1824)
                     /locus_tag="VHN55_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006956250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX2803341.1"
                     /translation="FITADQNGPKHLNIKLSRSKLEALVDDLIQRTIEPCKKALKDAG
                     MDAKDIADVVLVGGMTRMPRVREVVKEFFGKDPHTGVNPDEVVAMGAAIQAGVLQGDV
                     KDVLLLDVTPLSLGIETLGGVFTRMIDRNTTIPTKRSQVFSTADDNQSAVTIRVFQGE
                     REMAADNKVLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEQQIRIQ
                     ASGGLADEDIEKMVKEAEQFAEEDKKRRAGAEAKNNAESLIHTTEKQLQEHGDKVDES
                     VKSEIENAISEAKAAVESGEPEQMTEKTNALAQSAMKLGEAMYKAQQAETEAAAGADA
                     GTSPPPTGEEGEAGTADEEVVDAEFSEVDEENKG"
BASE COUNT          249 a          622 c          567 g          386 t
ORIGIN      
        1 gatcttcacc gtcagcttgc gcttgttgag agtccgtccc tcgccttcgc aggcccggca
       61 cgggtcggag atgacttcgc cgcttccgcg gcaagtgggg cagccgcgct cgacgacgaa
      121 aaagccctgc tgcgcgcgga ccttgcccat accgccgcag gtgttgcagg tgcgcgcgca
      181 attcgccgct tccgcgcaac cgtggccgtg acaggtctca cacttgccga gcgcatcgac
      241 ggtgaccgtc gcttccttgc ccgcgaacgc ttcctcgagg ctcagctcga gatcgtagcg
      301 aaggtcggcg ccgcgagccg gattggcgcg ggcaccgccc gagcggtcca tgaaatcgcc
      361 aaagatggac gagaaaatgt ccgagaagcc gtcgaagccc gccgacccga acgggtcctg
      421 accgccgcct ccgccgttct ggaaggccgc ttttccgaag cggtcgtagg cggcccgctt
      481 ctgcgggtcc ttgagcacgt cataggcttc gctgatcgcc ttgaaccgcg cctcctgctc
      541 ggtgcagccg ttgtggcggt cggggtgatg ctccttggcg agccggcgat aggcagactt
      601 gatcgtgtgc aggtccgcgc cgcggggaac gcccaacagc tcgtaataat cctgctcgac
      661 catcacactc ccccggtacg ccgactaggt gccggcggtt gggccggcac cgcaatcatc
      721 ccttgttctc ttcgtcgact tccgagaatt ccgcgtcgac gacctcttcg tcggcggtcc
      781 cggcctcgcc ttcctcgccg gtcggcggcg gggacgtgcc cgcatcggca ccggccgcgg
      841 cttcggtctc ggcctgctgc gccttgtaca tggcttcgcc gagcttcatc gccgactggg
      901 cgagcgcatt ggtcttctcg gtcatctgct cgggctcgcc gctttcgact gccgccttgg
      961 cttccgaaat ggcgttctcg atttccgact tcaccgactc gtcgaccttg tcgccatgct
     1021 cctgaagctg cttttccgtc gtgtggatga ggctctcggc gttattcttc gcctcggccc
     1081 cggcgcgccg cttcttgtcc tcttcggcga actgctcggc ttccttgacc atcttctcga
     1141 tgtcttcgtc ggcgaggccg cccgaggcct ggatccggat ctgctgctcc ttgccggtgc
     1201 ccttgtcctt ggcgctgacg ttgacgatgc cgttggcgtc gatgtcgaaa gtgacctcga
     1261 tctgcggcac tccgcgcgga gccggcggaa ttccgaccag gtcgaactgg ccgagcacct
     1321 tgttgtcggc cgccatttcg cgctcgccct ggaagacccg gatcgtgacc gcgctctgat
     1381 tgtcgtcagc ggtcgagaaa acctggctgc gcttggtcgg gattgtcgtg ttgcggtcga
     1441 tcatccgcgt aaacacgccg ccgagagtct cgattccaag gctgagcgga gtcacgtcga
     1501 gcaggagcac gtccttgacg tcaccctgga ggactccggc ctggatcgcc gcgcccatgg
     1561 cgacgacctc gtccgggttg actccggtgt gcgggtcctt gccgaagaat tccttcacca
     1621 cttcgcgaac ccgcggcatc cgcgtcattc cgccgaccag gacgacgtcc gcaatgtcct
     1681 tggcgtccat acccgcatcc ttgagcgcct tcttgcaggg ctcgatggtg cgctggatca
     1741 ggtcgtcgac cagcgcctcg agcttcgagc ggctgagctt gatgttcagg tgcttcggcc
     1801 cgttctggtc ggcggtgatg aacg
//
LOCUS       DATAKH010000120         4275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2572,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000120 DATAKH010000000
VERSION     DATAKH010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4275
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2572"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VHN55_05085"
     CDS             complement(<1..217)
                     /locus_tag="VHN55_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020820306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HEX2803342.1"
                     /translation="MNDISNVNPESRAETAMASPDRMVKLREAFGVDSDMEVPAFSEA
                     DERVPDLDPAYVFDPNTTLAVCAGFARN"
     gene            complement(264..947)
                     /locus_tag="VHN55_05090"
     CDS             complement(264..947)
                     /locus_tag="VHN55_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEX2803343.1"
                     /translation="MTLEKLTRSRQIEQKRRYDDACGLAHALELIGERWAMLVLRELA
                     YGPRRFSELKADLQGISANVLTQRLTELESRGLVRKAKLPPPASVQVYQATEWGLEAI
                     PMIASLGRWAARSPSHDPTLPMSHVSVIMSLQTLLSPALAEGLNARIGFRLGDTEYVT
                     VLRDGRLEVERGGLSNCDVIFSGTPTAVAAVIHGGAPLELVTIEGDIDLARRFVTLFP
                     LPPKVEAAR"
     gene            1050..1805
                     /locus_tag="VHN55_05095"
     CDS             1050..1805
                     /locus_tag="VHN55_05095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HEX2803344.1"
                     /translation="MTYFEGFVAPVPESNRDAYTKSSKEFAPIMREFGVRRHVEAWDS
                     DVPEGKVTDFRKAVDAIPEEKVVFAWFEYPDRAARDSANEKMMSDPRMQEMGKDMPFD
                     AKRMIVGGFDAIVEEGSAGGKYADGFVVPVPEGKRDAYRELASKMAKVFRQHGATRVV
                     EAISDDVPHGKVTDFYRAVKAEDGEAVVFSFIEWPDKETRDTAWEKIMSDESLKPEGD
                     MPFSGQRMFWGGFEKILDSAEQPAIEAGAPVSA"
     gene            1845..2681
                     /locus_tag="VHN55_05100"
     CDS             1845..2681
                     /locus_tag="VHN55_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007677090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2803345.1"
                     /translation="MTDVRSEAAPAVSAKARGDSHGTFIWYELMTSDPDGAKAFYDAL
                     VGWDIEPEPTGEQPMDYRMIRRSDGGNAGGVLRLDADMAAQGARPVWLGYVCVDDVDS
                     TTSEIETAGGKTLMVADIAGVGRIAMVADPQGAPFYVMTPTPPASDPDAKSDVFSATA
                     AQRVNWNELSTTDPASAREFYGDRFGWKSDDFMPMGDIGEYRFLDHRGDRIGALCGVM
                     AGQQPKWRYYIRVPSIAAAKASIEQNRGTVAMGPHEVPGGDWIIIGIDPQGAEFALVG
                     GK"
     gene            2691..3188
                     /locus_tag="VHN55_05105"
     CDS             2691..3188
                     /locus_tag="VHN55_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019832346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2803346.1"
                     /translation="MANKLTTCLWFDKGEARKAAEFYASVFPDSQVGGNMTAPGDFPG
                     GETGEELTVDFTVLGRSFVGLNGGPNFKPNEAVSFMVVTEDQEETDRYWNAIVGNGGE
                     ESACGWCKDKWGFSWQITPRVLLEANTNPDKAAAKRAFDAMMTMQKIDVAKIEAALSG
                     ETTDA"
     gene            3181..3843
                     /locus_tag="VHN55_05110"
     CDS             3181..3843
                     /locus_tag="VHN55_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010407287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX2803347.1"
                     /translation="MRKLTAAVFISLDGVMQAPGGPEEDPTSDFKYGGWVQPLWGEDM
                     GPFEGVIMGEYDLLLGKRTYDIFSGYWPYNQDNPIGEKFQRINKYVLTHSREPLEWEN
                     SHRLSGDTAQAVAELKQSEGRDLLIQGSSTLYPPLLSAGLIDRMMLMTFPVVLGRGKS
                     IFDGSQEAGTMKLVDHFVSSSGVVIASYEPAGNVQTGTFETKEPSEQELDRRAKMEAG
                     TW"
     gene            3840..>4275
                     /locus_tag="VHN55_05115"
     CDS             3840..>4275
                     /locus_tag="VHN55_05115"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2803348.1"
                     /translation="MTLQLHGHPFSSYTWKALIPLYANETPFEFVAMSTDRPLGEQFP
                     GQAHPGGHIPVLVDGDSVVVEATSIVEHLALHHPGDAPLIPDDPAEAAVARMVDRVFD
                     NYVMGNMQRVVSAHFISRDKPELGLRDTPDEAEVAGAKTKLSK"
BASE COUNT          871 a         1292 c         1389 g          723 t
ORIGIN      
        1 ggttgcgggc gaagccggcg cagaccgcga gggtcgtgtt gggatcgaac acataagccg
       61 gatcgagatc cggaacccgc tcgtcggcct cgctgaaagc gggcacttcc atgtcggaat
      121 cgacaccgaa cgcctcgcgc aacttcacca tgcggtcggg cgacgccatc gccgtttcgg
      181 ctcggctttc ggggttcacg ttggaaatat cgttcatcga ttcggccctt aaggcagcgg
      241 ccagtgcggc tcaataagcg gggtcagcgc gcggcttcca ctttgggcgg gagagggaaa
      301 agcgtcacga accgccgcgc caggtcaata tcgccttcaa tggtgaccaa ttcaagcggc
      361 gctccgccat ggatgaccgc ggcgacggcg gtcggggttc cgctgaagat cacgtcgcag
      421 ttggaaagac cgcccctctc gacctcgagc cggccgtcgc gaaggacggt cacatattcg
      481 gtatcgccga ggcgaaaccc gatccttgca ttcagacctt ctgccaaagc cggcgagaga
      541 agggtttgaa gcgacatgat taccgacacg tggctcatcg gcagcgtcgg atcatgcgaa
      601 gggcttcgcg ctgcccacct gcccagcgag gcgatcatcg gtatggcctc gaggccccat
      661 tcggttgcct gatagacctg gaccgatgcc ggcggcggaa gcttggcctt tcgtaccagg
      721 ccccgggact cgagctcggt caggcgctgg gtcagcacgt ttgcgctaat cccctgaagg
      781 tcagctttca gctccgaaaa gcgcctgggc ccgtaagcga gctcgcgaag cacgagcatc
      841 gcccatcgct cgccgatcaa ttccagcgcg tgggcaagcc cgcaggcatc gtcgtaccgc
      901 cgtttttgct cgatttgccg agacctagtt agtttttcta acgtcacggt tgcaatttag
      961 gattacggag cgcagaaagc aagcgaatcg agtcgcgaaa aatctttgca agaagcgtaa
     1021 aggctaagcc gagtcgaagg aggagcagca tgacctattt tgaaggtttc gtggcacccg
     1081 ttcccgagtc caacagggac gcctacacca agtcgtcgaa ggagttcgcg ccgatcatgc
     1141 gcgagttcgg ggtacgccgg cacgtcgaag cctgggacag cgatgtcccg gaaggaaagg
     1201 tcaccgattt ccgcaaggcc gtcgacgcga ttccagaaga gaaggtcgtc ttcgcctggt
     1261 tcgaatatcc cgaccgggct gctcgcgact cggccaacga gaaaatgatg agcgacccgc
     1321 ggatgcagga aatgggcaag gacatgccct ttgacgccaa gcggatgatc gtcggcggct
     1381 tcgacgccat cgtcgaagaa ggctcggccg gcggcaaata tgcggacggc ttcgtcgtac
     1441 cggtcccgga gggcaagcgc gatgcctatc gtgaactcgc ctcgaagatg gccaaggtct
     1501 tccggcagca tggagcgacg cgagtggtcg aagcgatttc cgacgatgtc ccgcacggca
     1561 aggtcacgga tttctatcgc gcggtgaagg ccgaggacgg cgaagcggtc gtcttctcgt
     1621 tcatcgaatg gcccgacaag gaaacccgcg acaccgcgtg ggagaagatc atgtcggatg
     1681 aaagcctcaa gcccgagggc gatatgccgt tctcaggcca gcgtatgttc tggggcggct
     1741 tcgagaagat tctcgacagc gccgagcagc cggcgatcga agcgggcgca cccgtttccg
     1801 cctgaccggc gcccgcacgt ccgattcagt tagggaggtc gaccatgacc gacgtccgca
     1861 gcgaagctgc gcctgccgtg agcgcgaaag cgcgcggcga ctctcacgga accttcatct
     1921 ggtacgagct gatgacgtcc gatccggacg gcgcgaaagc cttttacgat gccctagtcg
     1981 gctgggacat cgagcctgaa ccgaccggcg agcagccgat ggattacagg atgatccggc
     2041 ggtcggacgg cggcaatgcc ggcggagtcc ttcggctgga cgcggacatg gctgcccaag
     2101 gcgccaggcc agtgtggctc ggctacgtct gcgtcgacga tgtggattcg acgacgagtg
     2161 aaatagagac ggccggcggc aagacgctta tggtggccga tatcgccggc gtcgggcgga
     2221 tcgccatggt cgccgacccc cagggcgcgc cattctacgt gatgaccccg accccgccgg
     2281 caagcgatcc ggatgcgaag agcgacgtct tctcggcgac ggcggctcaa cgcgtgaact
     2341 ggaacgagct gagcacgacc gacccggcct cggctcgcga attttacggt gaccggttcg
     2401 gctggaagag cgacgacttc atgccgatgg gcgatatcgg cgagtatcgc ttcctcgacc
     2461 atcgcggcga ccgcatcgga gccttgtgtg gagtgatggc cgggcagcag ccgaaatggc
     2521 gttattacat ccgggtgccg tcgatcgcgg cggcgaaggc ttcgatcgag cagaaccgag
     2581 gcaccgtcgc gatgggcccg catgaagtgc ccggcgggga ctggatcatc atcggtatcg
     2641 acccgcaggg cgctgaattc gcgcttgtcg gcggcaaata ggaggaaatc atggcgaaca
     2701 aactgaccac ctgcctctgg ttcgacaaag gcgaggcccg caaggccgcc gaattttacg
     2761 cgtccgtgtt ccccgacagc caggtcggcg gcaacatgac cgccccgggc gactttcccg
     2821 gcggcgaaac gggcgaggaa ctgaccgtag acttcaccgt gctcgggcgc tctttcgtcg
     2881 gcctcaacgg cggccccaat ttcaagccca acgaagcggt cagcttcatg gtcgtcaccg
     2941 aggaccagga agagaccgac cgctactgga acgcgatcgt cggcaacggc ggcgaagaga
     3001 gcgcctgcgg ctggtgcaag gacaaatggg gcttttcctg gcagatcacg ccgcgcgtgc
     3061 tgctggaggc gaataccaat cccgacaagg cggcggcgaa gcgcgctttc gacgcgatga
     3121 tgacgatgca gaagatcgac gtcgcgaaga tcgaagcagc cctgagcggc gagaccaccg
     3181 atgcgtaagc tcaccgcagc cgtgttcatc tcgctcgacg gcgtaatgca ggcgccgggc
     3241 gggccggaag aagatccgac cagcgatttc aagtacggtg gctgggttca gcctttgtgg
     3301 ggcgaagaca tgggcccgtt cgagggcgtc atcatgggcg agtacgacct gctgctgggc
     3361 aagcgcacgt acgacatctt ctccggttac tggccgtaca accaggacaa tccgattgga
     3421 gagaaatttc agcgcatcaa caaatatgtg ctgactcact cccgcgagcc gctcgaatgg
     3481 gagaacagcc accggctgtc cggcgacact gcgcaagcag tcgccgagct caagcaaagc
     3541 gagggccgcg atctgcttat ccagggcagc agcaccctct atccgccatt gctctccgcc
     3601 gggctgatcg accggatgat gttgatgacc tttccggtcg tgcttggccg gggcaagagc
     3661 attttcgacg gttcgcagga agccggcacg atgaagctcg tcgatcactt cgtctcgagc
     3721 tcgggcgtcg ttatcgcgag ctatgagcct gcagggaacg tccaaaccgg cacgttcgag
     3781 acgaaggaac cgagcgagca ggagctcgat cgccgcgcga agatggaagc gggaacctgg
     3841 tgacgctcca gctccacggc caccctttct cgtcctacac ctggaaggcg ctgatcccgc
     3901 tgtacgcgaa cgagacgccg ttcgaattcg tggccatgtc gaccgatcgg ccattgggcg
     3961 agcagttccc cggacaggcg cacccgggcg gccacatacc cgtcctggtc gatggcgatt
     4021 cggtcgtggt cgaagcgacg agcatcgtcg agcacttggc attgcatcac cccggcgatg
     4081 cgccgctgat tccggacgac ccagcggagg ccgcggtggc ccgcatggtc gacagagtgt
     4141 tcgacaatta tgtgatgggc aacatgcagc gcgttgtctc cgcgcacttc atcagccgcg
     4201 acaagcccga gctaggcctt cgcgacaccc ccgacgaagc ggaggtggcg ggtgccaaga
     4261 cgaagctcag caagg
//
LOCUS       DATAKH010000121         2088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10272,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000121 DATAKH010000000
VERSION     DATAKH010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10272"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1120
                     /locus_tag="VHN55_05120"
     CDS             <1..1120
                     /locus_tag="VHN55_05120"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011445665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEX2803349.1"
                     /translation="HTTLVPWIAAAGELKTKPTQQSVRELSSLGVQPEVLLCRCDRPL
                     PETEREKIALFCNVRKSAVIPALDARNIYDVPLQYHEAGLDDEVLHAFRIDDAPPPNL
                     DRWREVMDRIDHYDSEVTIGVVGKYVGLPDAYKSLNEALIHGGIANRAKVNIQWLDAE
                     LFEDASGDLAAELEPLHGILVPGGFGERGSEGKIAAVRFARERKVPFFGICLGMQMAC
                     IEGARAAEVDDASSTEFGPTEEPVIGLITEWMSPEGLQERGADSDLGGTMRLGAYEAE
                     LGGNSRIANIYGSTRITERHRHRYEVNTHYMPVLEKTGLVFSGMSPDGRLPEIIERPD
                     HPWFIGVQFHPELKSRPFDPHPLFASFIEASLEQSRLV"
     gene            1188..1340
                     /locus_tag="VHN55_05125"
     CDS             1188..1340
                     /locus_tag="VHN55_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEX2803350.1"
                     /translation="MLLTIAIIILVLWALGFFAFHVAGGLIHLLLIVGIIVLIWNFVA
                     GRRVGP"
     gene            1402..>2088
                     /locus_tag="VHN55_05130"
     CDS             1402..>2088
                     /locus_tag="VHN55_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2803351.1"
                     /translation="MTNSISTRLAVLGSGPAGYTAAIYAARAGLQPILIQGITPGGQL
                     TTTTDVENYPGFRDVIQGPWLMEEMQAQAEHVGTKVIWDHITAVDLSSRPFRLTGDNG
                     THYFADALVIATGAQAKYLGLPSEEHMKGRGVSACATCDGFFYRGKKVAVIGGGNTAV
                     EEALYMTNHSHDVTLIHRRDSLRAEKILQDRLFANEKINVIWDSEVVEFVAGGEPEAL
                     VGLDLRNKRTG"
BASE COUNT          394 a          716 c          627 g          351 t
ORIGIN      
        1 ccacacgacc ctggtcccgt ggatcgccgc ggccggcgag ctgaaaacca agccgaccca
       61 gcagagtgtc cgcgagctgt cgagcctcgg ggtgcagccg gaggtgctgt tatgccgctg
      121 cgaccgcccg ctgccggaaa ccgagcgcga aaagatcgcc ttgttctgca acgtccgtaa
      181 atccgcagtc atcccggcgc tcgacgcgcg caatatctac gacgtcccgc tccagtatca
      241 cgaggccggg ctcgacgacg aagtgctcca cgccttccgg atcgacgatg cccctccgcc
      301 caacctggac cggtggcgcg aagtaatgga ccggatcgac cattacgaca gcgaggtgac
      361 gatcggggtg gtcggcaaat atgtcggact tcccgatgcc tacaaaagcc tcaacgaggc
      421 gctgattcac ggcggcatcg ccaaccgcgc caaggtcaac atccaatggc tcgacgccga
      481 gctgttcgag gatgcaagcg gcgacctcgc agccgagctc gagccgttgc acggaatact
      541 cgtccccggc gggttcggtg agcgcgggag cgaaggcaag attgccgccg tccgcttcgc
      601 ccgcgagcgc aaggttcctt tcttcgggat ctgcctgggg atgcagatgg cctgcatcga
      661 gggcgccagg gcggccgaag tcgacgatgc atcgagtacc gagttcggcc cgacagaaga
      721 gccggtgatc ggcctcatca ccgaatggat gagccccgaa ggactgcagg agcgtggcgc
      781 cgacagcgac ctcggcggca ccatgcgctt gggcgcctac gaggcggagc tcggcggcaa
      841 cagccggatc gccaacatct atggttcaac ccggatcacc gagcgccacc gccaccgtta
      901 cgaggtcaac acccactata tgccggtgct ggaaaagacc ggcctcgtct tctcgggaat
      961 gtccccggac ggacgccttc cggagatcat cgagcgcccc gaccacccgt ggttcatcgg
     1021 ggttcagttc caccccgagc tcaagagccg ccccttcgac ccgcacccat tgttcgcaag
     1081 cttcatcgaa gcctcgctgg agcagtcgcg gctggtctga gccggaacag tcgtcccttc
     1141 tgaacggtta cgtgtgcgtt ccgaatccga ccgacgggga ccgcttcatg cttctcacca
     1201 tcgcaatcat catcctggtt ctctgggcgc tcggcttctt tgcctttcat gtcgccggcg
     1261 gcctaatcca tctcctcctc attgtcggga tcatcgtcct gatctggaac ttcgtcgccg
     1321 gacggagggt gggcccctga cgtccctcgg aacgatcttt tcaacattgc cgggcgggta
     1381 agcgcaccct aaatccccgc catgacgaac agcatttcga cccgcctggc ggtcctgggc
     1441 tcgggcccgg ccggctacac ggctgcaatc tacgccgccc gcgccgggct ccagccgatc
     1501 ctgatccagg gaatcactcc cggcggtcag ctcaccacca ccaccgacgt cgagaattat
     1561 cccggctttc gtgacgtcat ccagggtccg tggctgatgg aggaaatgca ggcccaggcc
     1621 gagcacgtcg gaacgaaggt gatctgggac catatcaccg ccgtcgacct gtcgagccgc
     1681 ccgttccggc tcaccggcga caacggcacc cattattttg ccgacgccct cgtcatcgcg
     1741 accggcgccc aggccaaata tctcggactc ccgtccgaag agcatatgaa ggggaggggc
     1801 gtgtcggcct gcgcgacctg cgacggcttc ttctaccgcg gcaagaaggt cgcggtgatc
     1861 ggtggcggca acaccgccgt cgaggaagca ctgtacatga ccaaccacag ccacgacgtc
     1921 accctgatcc accgccgcga cagcctccgc gccgaaaaga tcctccagga ccggctgttt
     1981 gcgaacgaga agatcaatgt catttgggac agcgaggtcg tcgagttcgt tgccggcggc
     2041 gagcccgagg ccctggtcgg cctcgacctc cgcaacaagc gcaccggc
//
LOCUS       DATAKH010000122         1946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2638,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000122 DATAKH010000000
VERSION     DATAKH010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2638"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VHN55_05135"
     CDS             <1..209
                     /locus_tag="VHN55_05135"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX2803352.1"
                     /translation="GGVGLVLLVDETGKVADCSVIRTSGVAALDAQACTILKLRGKLE
                     PAIGADGKPAKGSLVGSVNWRIAG"
     gene            complement(206..952)
                     /locus_tag="VHN55_05140"
     CDS             complement(206..952)
                     /locus_tag="VHN55_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803353.1"
                     /translation="MATIAVPPRDRQAAERKFYTRMAFLLVFIVFLGFAPSFYLRGIV
                     PPYPRPNPTLPPSVLLHGLMFTLWMALLVLQTQLIATRRTEVHMTLGKATMLVAIALI
                     PIMYVTAVWGVARESHPPFTDGLNWTAIPLAVIPAFSFLIYEAWRRRKQAQWHKRLML
                     SATILFVAGPGFSRIPLAPPSFWAFTIQLLAGTALLFLPLFIWDRKTQGKVHPATWTG
                     YAVATATAVIPLALIYTKSWAPVAATLPGI"
     gene            1088..1891
                     /locus_tag="VHN55_05145"
     CDS             1088..1891
                     /locus_tag="VHN55_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX2803354.1"
                     /translation="MRLFVTPICGSLLMLSGAAYSQHSAQLPAGTSGQATIAASPIAA
                     AVANPARTPDNVELDQSRKPAEVLGFFGLEPGMNAIDMFGANRYWSEIMAPVVAPSGS
                     VVVWQPTQFMNDKRRSEFAEFAAKQPNVVLITSPFENPLLGANRYDFMIMNMDYHDVY
                     WQNPERKIPRMEPDAWLKALYSAMRPGGVVGIIDHVASPNDDPRATVEKYHRIDPAIV
                     KADFQRAGFVLEAESDMLRNPADDHALGVFDPAIRGKTDRFVFRFRKPA"
BASE COUNT          393 a          576 c          645 g          332 t
ORIGIN      
        1 agggcggcgt cgggctcgtg cttttggtcg acgagacggg gaaggttgcc gactgctccg
       61 tcataaggac cagcggtgtc gctgcgcttg acgcgcaggc ctgcacaatc ctgaagctgc
      121 gagggaagct ggagcctgct atcggagccg acggcaagcc tgcgaaggga tcgctcgtcg
      181 gttcggtgaa ctggcgtatc gcgggctaaa ttcccggcaa tgtcgctgca acgggcgccc
      241 agcttttcgt gtagatcaat gccagcggga tcactgcggt ggcggtcgcc acggcatagc
      301 ccgtccaggt cgcagggtgc accttgcctt gggtctttcg gtcccagatg aacagcggca
      361 ggaacaggag cgcggttccc gccagaagct ggatcgtgaa cgcccagaag ctcggcggcg
      421 cgagcgggat tcggctaaac cctggacctg caacgaacag gatcgtggcg ctcagcatca
      481 gccgcttgtg ccattgcgcc tgctttcgcc tccgccatgc ctcgtagatc agaaacgaga
      541 acgcggggat cacggcaagt ggaatggcgg tccaattgag gccgtcggta aagggcgggt
      601 ggctctcgcg agcgaccccc cagacggcgg tcacgtacat gatcgggatc agcgcaatcg
      661 ccaccagcat cgtcgctttg cccaacgtca tgtgaacttc ggtccggcga gtggcgatca
      721 gttgcgtctg aaggaccagc aacgccatcc acagggtgaa catcaggcca tggaggagca
      781 cggaaggcgg cagcgtcggg tttggacgcg ggtaaggcgg cacgatcccg cgcagataga
      841 agctcggagc aaagccgagg aagacgatga agacgagcag aaacgccatg cgcgtgtaga
      901 atttgcgctc ggcggcctga cgatcgcgtg gcggtacggc aatggtagcc atggccaatc
      961 ccccgaatgc ctggcgaagg gcggcaaaat agtcgcaatc ttgccgttcg gatagaggct
     1021 ttcgcaggga cgctggcgct cgttacgcgc ccgcgataag tcacggcagt acaacgagga
     1081 gcacgacatg cgcctattcg tcacaccgat ctgcggctca ctgctgatgc tctcgggcgc
     1141 cgcttattcc caacatagcg cgcagctccc tgcgggcacg agtggccagg ccacgatcgc
     1201 cgcaagcccg attgcggcag cggtggcgaa tccggctcga acgccggaca acgtcgagct
     1261 ggaccaatcg cgaaagccag ccgaagtgct cggtttcttc ggcctggagc cggggatgaa
     1321 cgcgatcgat atgtttggcg ccaaccgcta ttggtcggag atcatggcgc cggtcgttgc
     1381 cccgtccggc tcggtcgtgg tgtggcaacc gactcagttc atgaacgaca agaggcggag
     1441 cgaattcgca gagtttgcgg cgaagcagcc gaacgttgtg ctgataacga gcccgtttga
     1501 aaatccgctg ctcggcgcca accgctacga cttcatgatc atgaacatgg attaccacga
     1561 cgtctattgg cagaatccgg agcgaaagat tccgcggatg gaaccggatg cgtggctgaa
     1621 ggcgctttac tcggcgatga ggccgggcgg agtcgtcgga atcatcgatc atgtggccag
     1681 ccctaacgac gacccccgag cgacggttga gaaataccat cggatcgatc ccgccattgt
     1741 gaaggccgac ttccagcgcg ccggtttcgt cctcgaggcg gagagcgaca tgcttcgcaa
     1801 tccggccgac gaccacgcgc taggcgtgtt tgatccggcg atccgcggca agaccgaccg
     1861 cttcgtcttc cgtttccgga aacccgcttg agcaagcagc cgaaggccgc cgcaacggcg
     1921 gcgcgggcga tgcgcggctc acgggc
//
LOCUS       DATAKH010000123         1686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10289,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000123 DATAKH010000000
VERSION     DATAKH010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10289"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..287)
                     /gene="rpsT"
                     /locus_tag="VHN55_05150"
     CDS             complement(24..287)
                     /gene="rpsT"
                     /locus_tag="VHN55_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEX2803355.1"
                     /translation="MANTPQAKKRIRRNANRATINHARISRIRTFIKQVESALAAGKK
                     TEAAEALKKAQPELARGVSRGVIHKNTASRKLSRLSKRVAALG"
     gene            complement(382..1188)
                     /gene="mutM"
                     /locus_tag="VHN55_05155"
     CDS             complement(382..1188)
                     /gene="mutM"
                     /locus_tag="VHN55_05155"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012051058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HEX2803356.1"
                     /translation="MPELPEVETTVRGLEKVLLGREVARVELRRPDLRRAFPPGLGQR
                     LTGATITSLGRRGKFGLIHTDRGDTVVFHLGMSGKWRLDPSDTHAHDHLILETREGGR
                     LALNDPRRFGSVDLVATESLDSWGPIAELGPEPTELDPERLRKQLRGRSAPVKTLLLD
                     QRIVAGLGNIYVCEALHRAHINPRRAAGRISRDSIDRLVIAIRDVIREAIEAGGSTLR
                     DYARPDGELGYFSKSFAVYDREGRQCPCGGTVRRIVQGGRSTFYCPGCQH"
     gene            1236..>1686
                     /locus_tag="VHN55_05160"
     CDS             1236..>1686
                     /locus_tag="VHN55_05160"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010545373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HEX2803357.1"
                     /translation="MTDRVNFGDQLVSPDEKTRRVGRVFSSVARRYDLMNDLMSGGLH
                     RRWKDRFVARVKPRAGEQVLDMAGGTGDVAFRMARRSAHVTVADINAEMLAVGMDRAE
                     ARSLEGLSWKQENAEALTFGNSSFDAYTIAFGIRNVTDIPAALKEAHR"
BASE COUNT          291 a          537 c          556 g          302 t
ORIGIN      
        1 cggtcgcttt ttgcgagccc gtatcagccc agggctgcta cccttttgga cagccgcgac
       61 aatttgcgcg acgccgtgtt cttgtgaatc actccccgcg aaacgccgcg tgcgagctcg
      121 ggctgtgcct ttttgagagc ctcggccgct tcggtcttct tgccggcagc aagggccgac
      181 tcgacctgct ttatgaaagt gcggattcgg ctgattcgcg cgtgattgat cgtggcgcga
      241 ttcgcattgc ggcggattcg cttcttggct tgcggcgtgt tcgccatttg cacaacgtcc
      301 cttggctcat gaaaaagcgg cgccggagga cggacccccg cgccgatacg ggcgctcccc
      361 tacaggggga gccgattcgg gtcaatgctg gcagccgggg cagtagaagg tcgagcggcc
      421 gccctgaacg attcgccgca ccgttccgcc gcacggacac tgccggcctt cgcgatcgta
      481 aactgcgaac gacttggaga aatagccgag ctcgccatcg gggcgagcat agtcgcgaag
      541 agtggagccg cccgcttcga tcgcctcgcg gattacgtcg cgaatagcga tgaccagccg
      601 atcgatgctg tcgcgggaaa tccgcccggc ggcgcggcgg ggattgatat gcgcccggtg
      661 aagcgcctcg cagacgtaaa tgttgcccag ccccgcgacg atcctctggt cgagcagcag
      721 cgtcttcaca ggcgcgcttc ggccgcggag ctgctttcgg agccgctccg ggtcaagctc
      781 ggtcggctcc gggccgagtt ccgcgattgg tccccacgaa tcgagcgact cggtcgcgac
      841 aaggtcgacg gacccgaatc ggcgaggatc gttgagcgcc agccgcccgc cctcccgagt
      901 ttcgagaatc aaatggtcgt gcgcgtgcgt gtcgctcggg tccagccgcc actttcccga
      961 cattccaagg tggaagacga ccgtgtcacc cctgtcggta tggatgaggc cgaacttgcc
     1021 gcgcctgccg agcgacgtga tggtggcgcc agtcaaccgc tggcccaggc cgggcggaaa
     1081 ggcccggcga aggtcgggtc tgcgaagctc gacccgggcg acttcacggc cgagcagcac
     1141 tttttccagc ccgcggaccg tggtttcgac ttcggggagt tcgggcactc tggccatatg
     1201 gcgaacgttg ccgcagccag ctagaggctc gcatgatgac cgatcgagtg aatttcggcg
     1261 accagctggt cagccccgat gagaagaccc gccgcgttgg gcgagtcttc agctccgtcg
     1321 cgcgccgata cgacctgatg aacgacctga tgtcaggcgg ccttcaccgc cgctggaagg
     1381 accgctttgt cgcgcgggtg aagccgcgag ccggcgagca ggttctcgac atggccgggg
     1441 gaaccggtga cgtcgccttc cggatggcgc gtcgcagcgc tcatgtcacc gtcgccgaca
     1501 tcaacgccga aatgctcgcc gtcggaatgg atcgggccga ggcgcgaagc ctcgaagggc
     1561 tctcctggaa acaggagaat gcagaagccc tgactttcgg aaactcgagc ttcgacgctt
     1621 atacgatcgc ctttggaatc cggaacgtga ccgacattcc cgccgcgctg aaggaagcgc
     1681 accggg
//
LOCUS       DATAKH010000124         2164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32295,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000124 DATAKH010000000
VERSION     DATAKH010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32295"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1226)
                     /gene="sufB"
                     /locus_tag="VHN55_05165"
     CDS             complement(<1..1226)
                     /gene="sufB"
                     /locus_tag="VHN55_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEX2803358.1"
                     /translation="MNEAVKNREIREKIDRDYEWGFSSDIEQEFAPKGLSEDTVRFIS
                     AKKNEPEWMLEWRLKAYRAWLEMEEVSWAKLDIPEIDYQDAYYYAAPKAKPKLASLDE
                     LDPEIRRTYEKLGIPIEEQKVLAGVEGAAKVAVDAVFDSVSVATTFRKELAAAGVIFM
                     SISEAIREHPELVKKYLGSVVPQRDNYFACLNSAVFSDGTFVYVPEGVRCPMELSTYF
                     RINAENTGQFERTLIVAEKGSYVSYLEGCTAPMRDENQLHAAVVEIFAHEDAEVKYST
                     VQNWYPGDAEGKGGIFNFVTKRALCSGDRSKVSWTQVETGSAITWKYPSCILKGESSV
                     GEFYSVALTNNCQQADTGTKMIHIGANSRSTIVSKGISAGRSNNTYRGLVRVLPRAEN
                     VRNFTQCDSLLLGDQCG"
     gene            complement(1223..1621)
                     /locus_tag="VHN55_05170"
     CDS             complement(1223..1621)
                     /locus_tag="VHN55_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013041453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly regulator"
                     /protein_id="HEX2803359.1"
                     /translation="MRLSHLADYAVVLMTAAARRDAGERLSATELSAETGVPLPTTQK
                     LMGQLAACGLLDSSRGAGGGFSLARPAAEISLADVVEAVEGPIAMTVCSEGRTDCALD
                     AHCRVKPHMGVVGNAVRGALGAVSLTELAR"
     gene            1721..>2164
                     /locus_tag="VHN55_05175"
     CDS             1721..>2164
                     /locus_tag="VHN55_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase (quinone)"
                     /protein_id="HEX2803360.1"
                     /translation="MRLYPVLRPFLFALGAEAAHRATIAALKFLPLHSAHLPPSVKTT
                     LAGLDFPSPVGLAAGFDKDAEVAAEMLTLGFGFVEVGTLTPRAQAGNAKPRLFRLAED
                     RAVINRMGFNNEGQAAAFMRLSGCSRLGGPIGVNIGANKDSPDRVG"
BASE COUNT          352 a          725 c          676 g          411 t
ORIGIN      
        1 ccgcactggt ccccgagcag cagtgaatcg cactgcgtga aattgcggac gttctcggcg
       61 cgcgggagca cgcggaccag cccgcgatag gtgttgttgc tgcggcccgc gctgatgccc
      121 ttcgacacga tagtcgagcg cgagtttgcg ccgatgtgaa tcatcttggt gccggtgtcg
      181 gcctgctggc agttgttggt cagcgcgacc gaatagaatt cgccgacgct gctttcgccc
      241 ttcaaaatgc agctcggata tttccaggtg atcgcgcttc cggtctcgac ctgcgtccag
      301 ctgaccttcg accggtcccc cgaacaaagc gcgcgcttgg tgacgaagtt gaagatgccg
      361 cccttgccct cggcgtcgcc cgggtaccag ttctggacgg tcgagtattt cacctccgcg
      421 tcctcatgcg cgaaaatctc gaccaccgcc gcgtgcagct ggttctcgtc gcgcatcggc
      481 gcggtgcagc cttcgaggta ggagacgtag ctgccctttt cggcgacgat cagcgtgcgc
      541 tcgaattggc cggtgttctc ggcgttgatc cggaaatagg tcgacagctc catcgggcag
      601 cgcacgccct cgggcacgta gacgaacgtt ccgtcggaaa agaccgcgct gttgaggcac
      661 gcgaaataat tgtcgcgctg cggcacgacg cttccgagat actttttcac cagctcggga
      721 tgctcgcgga tcgcctcgct gatcgacatg aagatgacgc cggcggccgc aagctccttg
      781 cgaaaggtgg tggcgacgct gacgctgtcg aacaccgcgt cgaccgcgac cttggccgcg
      841 ccttcgaccc cggcgagcac cttctgctcc tcgatcggga ttccgagctt ctcgtaggtg
      901 cggcggattt caggatcgag ctcgtccagc gacgcgagct tcggcttcgc cttgggcgcc
      961 gcgtaataat aagcgtcctg gtaatcgatc tcggggatgt cgagcttggc ccagctgacc
     1021 tcctccatct ccagccaggc gcgataggcc ttgagccgcc attcgagcat ccactcgggc
     1081 tcgttcttct tggccgagat gaagcggacc gtgtcctcgc tcaggccctt gggcgcgaac
     1141 tcctgctcga tgtccgagct gaagccccac tcgtaatcgc ggtcgatctt ctctcggatc
     1201 tcgcggttct tgacggcttc gttcatcgcg ccagctccgt gagcgacacg gcgccaagag
     1261 ctccgcgaac ggcattgccg accacgccca tgtgcggctt tacccggcag tgcgcgtcca
     1321 gggcgcagtc cgtgcgccct tcggaacata ccgtcatcgc gatcggccct tcaaccgcct
     1381 cgacgacgtc ggcgaggctg atctccgccg ccggccgagc cagcgagaag ccgccgccgg
     1441 cgccccgcga actgtcgaga agcccgcagg cggcaagctg acccatcagc ttctgggtcg
     1501 tcggaagcgg aactccggtc tcggcggaca gctcggtcgc gctgaggcgc tcgccggcgt
     1561 cgcggcgggc ggcggcggtc atcaggacaa ccgcataatc ggcaaggtgg ctaaggcgca
     1621 tatctaattc ggagctttcc agtccgattt agtgcgttgc accgcgaaac tcaacctttc
     1681 gatgacggcg gcagattgaa tcgctaaacg gaaacttaac atgcgtctgt atccagtcct
     1741 gcgcccgttt cttttcgctc tcggggcgga ggcggcgcat cgggcgacga tcgcggcgct
     1801 caagttcctg ccgctgcatt cggcgcatct cccgccttcg gtgaaaacga cgctcgccgg
     1861 gctcgacttc ccgtcgcccg tcggactcgc tgccgggttc gacaaggacg ccgaggtcgc
     1921 cgccgagatg ctgacgcttg gcttcggctt cgtcgaggtc gggacgctca ccccgcgcgc
     1981 ccaggcgggc aatgcgaagc cccgcctgtt ccggctcgcc gaggaccgcg ccgtcatcaa
     2041 ccgaatgggc ttcaacaacg aaggccaggc ggccgcgttc atgcgcctca gcggctgcag
     2101 ccggctcggc gggcccatcg gcgtcaatat cggcgctaac aaggacagcc ccgaccgcgt
     2161 cggc
//
LOCUS       DATAKH010000125         1695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_25425,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000125 DATAKH010000000
VERSION     DATAKH010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25425"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="VHN55_05180"
     CDS             <1..684
                     /locus_tag="VHN55_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HEX2803361.1"
                     /translation="DGERAVAQVVLNRVRHPAFPSSVCGVVYQGSTRVTGCQFTFTCD
                     GSLQRRPDSEGWARAKRIAQAALNGAVFGPVGLATHYHADYVLPYWASSLAKNAVVGA
                     HLFYRWAGGWGKPPAFTQRYAKQEPDSGALKSMALAALASRPAAAQAQQIADIPGAEL
                     EKAPAGRVAVRFKLAEAREAAEKAPHVDYVEKVAASDNLRWTLSGTASDANQKPLGKA
                     PKAAVEASN"
     gene            complement(681..1466)
                     /locus_tag="VHN55_05185"
     CDS             complement(681..1466)
                     /locus_tag="VHN55_05185"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX2803362.1"
                     /translation="MSMQDSAYAALGLRPGARRSEVDQAYRRLIKLYHPDRTGGDGHR
                     AAEINRAYTLLRRSGLAATPRPQRMPMPVPRPRRAGRPRFRWAMLAALAAVAAGGFAA
                     MDKRGAIGRATDRMAIRLPVSETIPLARFSSPVTSFDEPLNLQVIDTAIANAVEFHEA
                     GDPGGAGEFSRQCQVKLRQQPNLARFDACSAFDEATVTLLGDEVVADSGSFDISAVVV
                     RELGAARLLSGDAAGAEFRIHRIRSRVEMALLPRLDPAAGAPP"
     gene            complement(1535..1611)
                     /locus_tag="VHN55_05190"
     tRNA            complement(1535..1611)
                     /locus_tag="VHN55_05190"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1575..1577),aa:Asp,seq:gtc)
BASE COUNT          300 a          579 c          555 g          261 t
ORIGIN      
        1 gatggcgagc gcgcggttgc ccaggtcgtg ctcaatcgcg tccgccaccc ggccttcccg
       61 tcgagcgttt gcggagttgt ctaccaaggc tcgactcgcg tgaccggctg ccaattcacc
      121 ttcacctgcg acggttcgct ccagcggcgg ccggacagcg aaggctgggc gcgtgccaag
      181 cgcatcgcgc aggcggcgct gaacggagcg gtgttcggcc ccgtcggcct cgcgacccac
      241 tatcacgccg actatgtcct tccctattgg gcttccagcc tggcgaagaa tgcggtcgtc
      301 ggagcgcatc ttttctaccg ctgggccggt ggctggggaa aacctcccgc attcacgcag
      361 cgttacgcga agcaggaacc ggattcgggc gcgctcaagt caatggcgct tgccgccctg
      421 gccagccgcc cggcggcagc acaagcgcag caaattgccg acattcctgg tgccgagctc
      481 gaaaaggcgc ccgccgggag ggtcgcggtg cgcttcaagc tcgccgaagc gcgcgaggcc
      541 gcagaaaagg cgccgcacgt tgactatgtc gagaaggtcg cggcctcgga caaccttcgc
      601 tggacgctct cgggaacagc ttccgacgcc aaccagaagc cgctcggtaa ggcgcccaag
      661 gcagccgtcg aagcctcaaa ctagggcggc gccccagcgg ctggatccag cctcggaagc
      721 agcgccattt cgacccgcga ccgaatgcgg tgaatccgga attcagcgcc cgcagcgtcg
      781 ccggacaata agcgcgccgc ccccagttcg cgaacgacga cagccgaaat gtcgaacgag
      841 cccgaatcgg ctacgacctc atctccaagc aaggttaccg tcgcctcgtc gaaggccgag
      901 cacgcgtcga atcgcgccag gttcggttgc tggcggagct tcacctggca ctgccggctg
      961 aattctcccg cgcccccagg atcgccggcc tcatgaaact ccaccgcgtt ggcgatggcg
     1021 gtgtcgatga cctgcaagtt gagcggctcg tcaaagctcg tcacaggcga cgaaaatcgg
     1081 gcaagcggga tcgtttcgga gaccggcaag cggatcgcca ttcgatcggt cgcgcggcca
     1141 atcgcccctc gcttgtccat tgccgcgaac ccgccggccg cgaccgcagc cagtgccgcg
     1201 agcatcgccc atcgaaaccg tgggcgacca gcgcgtcgcg gtcgcggaac cggcataggc
     1261 atccgctgcg gccttggtgt cgccgcaagc ccgctacggc gcaggagggt gtaggcacgg
     1321 ttgatctcgg cggcgcggtg gccgtcaccg ccggtgcgat cgggatggta gagcttgatg
     1381 agccgccgat aggcctggtc gacttcgctc cggcgggcgc cgggcctgag gccgagggct
     1441 gcataagcgg aatcctgcat gctcatcgcg cccgcaacct actgcatgcg cggcgattca
     1501 agaagcgctc gcgagggacg gcgtgtgcgt ggaatggcgc gagtgacggg acttgaaccc
     1561 gcgacctccg gcgtgacagg ccggcgctct aaccaactga gctacacccg cgcatttttc
     1621 ctgggtccca ccgaagccgg gcctcgatga gaggcgcgcg acctaggtga cgccctctgc
     1681 actgtcaaca agccc
//
LOCUS       DATAKH010000126         4765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_25431,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000126 DATAKH010000000
VERSION     DATAKH010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4765
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25431"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="VHN55_05195"
     CDS             complement(<1..242)
                     /locus_tag="VHN55_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX2803363.1"
                     /translation="MTDISKIRNFSIIAHIDHGKSTLADRLIQATGGLTQREMKEQLL
                     DSMDIERERGITIKAQTVRLQWKGHELNLMDTPGHV"
     gene            285..1472
                     /locus_tag="VHN55_05200"
     CDS             285..1472
                     /locus_tag="VHN55_05200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803364.1"
                     /translation="MKRICVMLASAMLVGAAAPKAPPPVAEYWMDAATASGMGAGLMG
                     GRPNMQQMMQMMEGGGQASHTLNLYLASRTKAASPQASHLIPPGMQMGPSLPLVAPAT
                     PGKPVTATPGMPDNFQRPKGRMIIYWGCGEHSGAGQPTVIDFSKVATGQIPPGFGAMM
                     AAAHAAQPPRPGQSAGYGEWPNTRDSRPVPPAASLIGAHKVEGNYSPPIAFSLAQGQD
                     FMPALGLREAGATPSGAIPLAWTPAPQATGYALAMFGGNSSGDMIVWTSANKATAFPN
                     MDYLSPSQVKPLVASGALLAPTTSQCTVPAEVAKASPAGMVMMIGYGPEAHFSDKPKA
                     PTWTVRARYKTSATLMLGMGAMMGGGDARPQAQEQQQPKKKKKRFGLGDIIEGATGLP
                     VGN"
     gene            1581..4433
                     /locus_tag="VHN55_05205"
     CDS             1581..4433
                     /locus_tag="VHN55_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX2803365.1"
                     /translation="MTHSLSRLTLLLATSALAACATAPQQVALAPPPVEAPVTAAPAE
                     PAPAPVSELVGQVAIPHTSFKLANGLTVIVHEDHKAPVVAVSTWYNVGSKDEPPGKTG
                     FAHLFEHLMFNGSDNLPGDYFEYLQQIGATDYNGTTWFDRTNYFQTVPKSALEKALFM
                     ESDRMGYLLGAVTQEKLDNQRGVVQNEKRQGDNQPGGLVEYEVLGNLFPDGHPYQHST
                     IGSMADLDAASLATVKEWFIDKYGPNNATLVLAGDITPAEARPLVEKYFGAIKPGPVN
                     VPAAADVPTLAAPKSIVMKDRVAATQIQRHWAVPGLLSPQLAALDVGGSILGGLASSR
                     LDEILVRDEKLAVSVTAGLQPFQRIGLFEVTATVKPGVDPAVVEKRLDEILADYIANG
                     PTEDEVQRATTREVSGRIRGLEQVGGFGGKAVALAEGQVFAGDSDFYKKTLASYAAIT
                     PADVKAAMQQWLSRPAFAIRLEPGDRPPYEESKFAAKKGKSADIATPKVKREIPPVGE
                     PAALDFPDVRHVQLSNGVKLAYAQRTTVPVTQVGLVFDAGFSADQPGSRGLQNFTMSM
                     LDEGAAGMSSQEIAEAEERLGAQIAAGGGVDTSTVTLSALSANLAPSLDLLADIVQRP
                     DFAPAEVERVRTQLLTGIAQAQKDPQGIAARALPALLYGETHPYGTTALGSPDAVKFF
                     TRGHLESFRQHWLRPDNLEIFVVSNLPLEEVQQQLERSFGTWTPTSAPKGVKSFGEVP
                     QRPKASKIVLIDRPGSPQSYIMAGQVTPIDPRSEMAAISGANDVLGGTFLSRINMDLR
                     ETKGWSYGVRGTVQLNAKVVPYIVTAPVQADRTADSIRALQQDIRDFLTTKGVTDEEL
                     ERAISNRVKALPGQFETSSSVLSAMQSNALYGRPDNYYELLGEKYRAQTTATLDASLR
                     EAVDPGSFVWVVVGDAAKVRPQLKKLGIPVEEVDPR"
     gene            complement(4473..>4765)
                     /locus_tag="VHN55_05210"
     CDS             complement(4473..>4765)
                     /locus_tag="VHN55_05210"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HEX2803366.1"
                     /translation="YPTVLPMGVKGGGTITAESGFGPQQSVAAGVGGGGLIDLRSVTA
                     RTAAAGVEGGGTILAGAPATLAAAVSGGGEIRYAGNPRVTTVINGGGSVRRD"
BASE COUNT          831 a         1593 c         1611 g          730 t
ORIGIN      
        1 tcgacgtggc cgggcgtgtc catcaggttg agctcgtggc ccttccactg gagccgaacc
       61 gtctgcgcct tgatggtgat cccgcgctcg cgctcgatgt ccatggaatc gagcagctgc
      121 tccttcatct cgcgctgggt cagaccgccc gtcgcctgga tcagccggtc ggccagcgtc
      181 gacttgccgt ggtcgatgtg ggcgatgatg ctgaagttgc ggattttgct gatgtcggtc
      241 atttcgagcc gcgctatagt ggctgcgcac aggggggcaa tcgaatgaag cgtatctgcg
      301 tgatgcttgc gtcggcgatg ttggtggggg ccgcggcccc caaggctccg ccgccggtcg
      361 ccgaatattg gatggacgcc gccaccgcga gcgggatggg cgcggggttg atgggcggca
      421 ggcccaacat gcagcagatg atgcagatga tggagggcgg cgggcaggcc agccacacgc
      481 tcaacctcta tctcgcctcg cggaccaagg cggcgtcacc gcaggcgagc cacctgatcc
      541 cgccggggat gcagatgggt ccgagccttc cactggtcgc gcccgccacg ccgggcaagc
      601 cggtgaccgc gaccccgggg atgcccgaca atttccagcg gcccaaaggg cggatgatca
      661 tctactgggg ctgcggcgag cattccggcg cgggccagcc gaccgtgatc gatttctcga
      721 aagtggccac aggccagatc ccgcccggat tcggggcgat gatggcggcg gcccacgccg
      781 cccagccgcc gcggccgggc cagtccgccg gttacggcga atggccgaac accagggact
      841 cgcggcctgt cccgcccgcc gcgtcgctca ttggagcgca caaggtagag ggcaattatt
      901 cgccgccgat cgccttctcg ctcgcgcagg ggcaggactt catgccggcg ctcgggcttc
      961 gcgaagccgg cgcgacgccg tcgggcgcga tcccgctcgc ctggaccccc gcgccgcagg
     1021 cgaccggcta tgcgctggcg atgttcggcg gaaacagcag cggcgacatg atcgtgtgga
     1081 cgagcgccaa caaggcgacc gcctttccca acatggacta tctgtcaccc tcgcaggtga
     1141 agccgctggt cgcgagcggc gcgctgctcg ccccgacgac aagccagtgc acggtcccgg
     1201 cggaagtggc gaaggcgtcg ccggcgggaa tggtgatgat gatcggctac ggccccgaag
     1261 cccatttctc cgataagccc aaggcgccca cgtggaccgt ccgcgcccgc tacaagacga
     1321 gcgcgacgct gatgcttgga atgggggcga tgatgggcgg cggcgacgcg cggccgcagg
     1381 cacaggagca gcagcagccg aagaaaaaga agaagcgctt cggccttggc gacatcatcg
     1441 agggcgcgac tgggcttccg gtgggcaatt gacaccgccc gccctgccgt cggtcgaaat
     1501 ctggcgcgcg ttcgtcggcg cgtcttgcct gcttcgcgcg cgcggttaag ctcgcgcccg
     1561 taatttcccg gagaaccagc gtgactcaca gcctcagccg actgaccctc ctgctcgcca
     1621 cctcggcgct cgccgcctgc gcgaccgctc cgcagcaagt cgccctcgcc ccgcccccgg
     1681 tcgaagcgcc ggtaaccgct gcgcccgccg agccggcgcc agcgccggtc agcgaactgg
     1741 tcggccaagt cgcgatcccg cacacgagct tcaagctcgc caacggcctg accgtcatcg
     1801 tgcacgagga ccacaaggcg ccggtcgtcg cggtgagcac ctggtacaat gtcgggtcca
     1861 aggacgagcc gccgggcaag accggcttcg cgcatttgtt cgagcacctg atgttcaacg
     1921 ggtcggacaa tctgccgggc gactatttcg aatatctgca gcagatcggc gccaccgatt
     1981 acaacgggac gacctggttc gaccgcacca attatttcca gaccgtgccc aaatcggcgc
     2041 tcgaaaaggc gctgttcatg gagagcgacc gaatgggcta tttgctcggc gcggtcaccc
     2101 aggagaagct cgataaccag cgcggcgtcg tccagaacga gaagcgccaa ggcgacaacc
     2161 agcccggcgg gctggtcgaa tatgaggtgc tcggcaacct cttccccgac ggccatccgt
     2221 accagcattc gacgatcggt tcgatggcgg acctcgacgc cgcaagcctc gccaccgtca
     2281 aagaatggtt catcgacaaa tacggcccca acaacgcgac gctggtgctc gccggcgata
     2341 tcacgcccgc agaagcgcgg ccgctggtcg agaaatattt cggggcgatc aagccggggc
     2401 cggtcaatgt cccggcggcg gccgacgtgc cgacactggc tgcgcccaag tcgatcgtaa
     2461 tgaaggaccg ggtcgcagcg acccagatcc agcgtcactg ggcggttcct gggctgcttt
     2521 cgccgcagct cgcggcgctc gatgtcggcg ggtcgatcct cggcgggctt gcaagctcgc
     2581 ggctcgacga gatcctggtt cgcgacgaaa agctggcggt ctcggttacg gccgggctcc
     2641 agcctttcca gcggatcggc ctgttcgagg tgacggcgac ggtgaagccg ggcgtggacc
     2701 cggcggtcgt cgagaaaagg ctcgacgaga ttcttgccga ttatatcgcc aacggcccga
     2761 ccgaggacga ggtgcagcgg gcgaccactc gcgaggttag cgggcggatc cgcgggctcg
     2821 agcaggtcgg cggcttcggg ggcaaggcgg tcgcgctggc cgagggccag gtgttcgccg
     2881 gcgattccga tttctacaag aagactctgg cgtcctatgc ggcgattacg cccgcggacg
     2941 tgaaggcagc gatgcagcaa tggctttcgc ggccggcgtt cgcgatcagg ttagagccgg
     3001 gcgacaggcc cccgtacgaa gagtcgaagt tcgcggcgaa gaaaggcaag agcgccgaca
     3061 tcgcgacccc gaaggtcaag cgcgagatcc cgccggtcgg tgagcctgca gcgctcgact
     3121 tccccgacgt ccgtcacgtc cagctgtcga acggggtcaa gcttgcctat gcgcagcgca
     3181 ccacggttcc ggtgacccag gtcgggctgg tgttcgacgc cggcttttcg gccgaccagc
     3241 cgggctcacg cggcctgcag aacttcacca tgtcgatgct cgacgaaggc gccgcgggca
     3301 tgagctcgca ggaaatcgcc gaggccgagg aaagactggg cgcgcaaatc gcggccggag
     3361 gcggagtcga caccagcacg gtcaccctgt cggcgctgag cgcaaacctg gcgccgtcgc
     3421 tcgacctgct tgccgacatc gtccagcggc cagacttcgc accggcggaa gtcgagcgcg
     3481 tgcgaaccca gttgctgacc gggatcgcgc aggcgcaaaa ggacccgcag gggatcgccg
     3541 ctcgggcgct tccggcgctt ctctatggtg agacgcatcc gtacggcaca accgcgcttg
     3601 gaagcccgga cgcggtgaaa ttcttcactc gcgggcattt ggagagcttc cgccagcatt
     3661 ggcttcgccc cgacaatctc gagattttcg tggtctcgaa cctgccgctc gaagaggtgc
     3721 agcagcagct ggaacggagc ttcggcacct ggactccgac gtccgcgcca aagggcgtga
     3781 agagcttcgg cgaggttccg cagcggccca aagcctcaaa gatcgtactg atcgaccgcc
     3841 cgggatcgcc ccagtcctac atcatggccg ggcaagtgac cccgatcgac ccgaggagcg
     3901 agatggcggc aatcagcggc gccaatgacg tgcttggcgg gaccttcctg tcgcggatca
     3961 acatggacct tcgcgagacc aagggctggt cctacggcgt tcgcgggacc gtgcagctca
     4021 acgccaaggt ggtgccctat atcgtcaccg cccccgtcca ggccgaccga accgccgatt
     4081 cgatccgggc gcttcagcag gacatccgcg acttcctgac caccaaggga gtcaccgacg
     4141 aagaactgga gcgggcgatc tccaatcggg tcaaggcgct gcccggccag ttcgaaacgt
     4201 cgagctcggt gctttcggcg atgcagtcca acgcgctcta cgggcggccg gacaattatt
     4261 acgagctgct tggcgagaaa taccgcgccc agaccaccgc gaccctggac gcatcgcttc
     4321 gcgaagcggt ggacccgggc agcttcgtct gggtcgtcgt cggcgacgcg gccaaggttc
     4381 ggccgcagct caagaagctc gggatcccgg tcgaggaagt cgacccccgc tagagggcgc
     4441 ggccggggcg gtgtcgcccc ggccagtccg gatcagtcgc gccggaccga gccgccgccg
     4501 ttgatgaccg tggtcacgcg cgggttgccg gcgtagcgga tctcgccgcc gccgctgacc
     4561 gccgcagcga gtgttgccgg agctccggca aggatcgttc cgccgccctc gactccggcg
     4621 gcggccgtgc gagcagtgac cgagcgcagg tcgatcaacc cgccgccgcc aactcccgcg
     4681 gccaccgact gctgggggcc gaagcccgat tcggcggtga tggtgccgcc acccttgacg
     4741 cccatcggaa gcacggtcgg gtagc
//
LOCUS       DATAKH010000127         5942 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21458,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000127 DATAKH010000000
VERSION     DATAKH010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5942
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21458"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..537)
                     /locus_tag="VHN55_05215"
     CDS             complement(4..537)
                     /locus_tag="VHN55_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803367.1"
                     /translation="MADVVARSTEPALGRIKLAWWREQLEALDEKAPPAEPRLNAVAG
                     QLLPRGIDGADVAGLEPGWATLLDPEVDATLVANRGKLLFGIGGRLLGSRDERIGEAG
                     ALYALASVGRRGVPQLLEPARDYLQRLSGHRFERRARPLTMLARASARDLDRDEAEGS
                     ASRAAAMLAHRWSGRIG"
     gene            complement(620..2053)
                     /locus_tag="VHN55_05220"
     CDS             complement(620..2053)
                     /locus_tag="VHN55_05220"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEX2803368.1"
                     /translation="MALELKMPALSPTMEEGTLAKWLVKEGDEVSSGDILAEIETDKA
                     TMEFEAVDEGKIAKILVPEGTDGVKVGEAIALLETEGGEAPAGPKHEPEAQAKTAAKN
                     EPSIPEPESQQAEATPTPHKMETAARDLVRDVDETSDDDRPDAPEGATMADVTVREAL
                     RDAMAEEMRRDERVFVMGEEVAEYQGAYKVTQGLLEEFGPKRVVDTPITEYGFAGLGT
                     GAAMGGLRPIVEFMTFNFAMQAIDHIVNSAAKTNYMSGGQMRCPVVFRGPNGAAARVA
                     AQHSQNYGPWYASVPGLVVIAPYSAADAKGLLKAAIRSEDPVVFLENELLYGQHFDVP
                     EVDDYVLPIGKAKVVRPGKDVTLVSYSIGVGVALEAAKQLLSEGIDAEVIDLRTLRPL
                     DKETVLKSLAKTNRMVVVEEGWPTCSISSEIIAIAMTEGFDDLDAPVLRVTDADVPLP
                     YAANLEKMALIKAEDVVEAAKTVSYRD"
     gene            complement(2053..3048)
                     /gene="pdhA"
                     /locus_tag="VHN55_05225"
     CDS             complement(2053..3048)
                     /gene="pdhA"
                     /locus_tag="VHN55_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014076217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEX2803369.1"
                     /translation="MARPPEPKRFEADKDQLLEFYKEMLLIRRFEERAGQLYGLGLIG
                     GFCHLYIGQEAVAVGLQSAMTVGKDSVITGYRDHGHMLAYKIDPKVIMAELTGREAGI
                     SKGKGGSMHMFSVEHGFYGGHGIVGAQVPLGTGLAFAHKYREDGGVCLAYFGDGAANQ
                     GQVYEAFNMAKLWNLPIIYAIENNQYAMGTSVARSASEPDFYKRGESFRIPGIRVDGM
                     DVLAVRGAAEMALEWAREKGPIILELMTYRYRGHSMSDPAKYRTREEVQDIRTQRDPI
                     EHAAKALEKMGVKEDELKAIDKEIKEIIVQAAKFAEDAPEPEAAELYTDVLVGTY"
     gene            complement(3190..3498)
                     /locus_tag="VHN55_05230"
     CDS             complement(3190..3498)
                     /locus_tag="VHN55_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEX2803370.1"
                     /translation="MGGKRSIGLIRRMFWPAMALLVVGNFAGYAIAGPNGILAWGGYH
                     RDLNERKIELAKLEEQKAQLRHRSKLLDPRKADPDLADELARRDLGLVRPDEIIVPLN
                     "
     gene            complement(3572..4861)
                     /gene="eno"
                     /locus_tag="VHN55_05235"
     CDS             complement(3572..4861)
                     /gene="eno"
                     /locus_tag="VHN55_05235"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEX2803371.1"
                     /translation="MTAITAIRGRQILDSRGNPTVEVDVTLEDGSFGRAAVPSGASTG
                     AHEAVELRDGDKDRWGGKGVEKAVRSVNGEIAEALTGHDAEDQGEIDSSMIALDGSDN
                     KGRLGANAILGVSLACAKAAAKAAGLPLYRYLGDGTAAMLPVPMMNIVNGGAHADNPI
                     DFQEFMIMPVGAASFSEALRCGTEVFHALKSALHSKGLSTAVGDEGGFAPDLKSARDA
                     LDFIIGSIETAGYSAGKDVLIALDPASTEYYRDGKYQLQGEALSLGSDEMVDYFEKLV
                     ADYPIASIEDGMAEDDWAGWKAITERLGDRVQLVGDDLFVTNVKRLARGIEDGVANSI
                     LIKVNQIGTLTETIAAIRLAQGHNYTAVMSHRSGETEDSTIADLAVGLGTGQIKTGSL
                     ARSDRVAKYNQLLRIEEGLGDRAVYPGAEAIKAYRRG"
     gene            5016..5594
                     /locus_tag="VHN55_05240"
     CDS             5016..5594
                     /locus_tag="VHN55_05240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803372.1"
                     /translation="MAQQDRDLPEGTDTVIPGAMDTDTSDVTGSTGRGGKGRSTRKSA
                     STGSRAGTGLMEKVRSGSDKLSEEAAGKARGFVGQGIERSAEALANVGKLVGETATGL
                     DERLGEEYGDYARKAAETLESTANRLASKDPDELIDDTRNFIRKSPGVALAGAAIVGF
                     ALARLVKSGLASDDNDEDGDEDRRSSSSRRRS"
     gene            5594..5941
                     /locus_tag="VHN55_05245"
     CDS             5594..5941
                     /locus_tag="VHN55_05245"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEX2803373.1"
                     /translation="MLKPAEDPTRPGGDRSIGELASQLVDDAKSYARAEVHLAKAIAA
                     EKSKSVAVAAALFGAATLVAIGAVCAVSVAIVVALAYYMTPLLAGLATFLILGAVAAA
                     IGWFGWVKLRDSL"
BASE COUNT          975 a         1995 c         1849 g         1123 t
ORIGIN      
        1 ctgtcaaccg atgcggccgc tccagcggtg cgcgagcatt gccgccgcgc gcgaggcact
       61 gccttcggcc tcgtctcgat cgaggtcgcg cgctgaagcc cgggcgagca tcgtcagcgg
      121 ccttgctcgt cgctcgaagc gatgcccgct cagccgctgc agatagtccc tggccggctc
      181 caatagctgc ggcacacccc gcctgccgac cgacgccagc gcataaagcg cgcccgcttc
      241 gccgatcctc tcgtcacgcg aaccaagcag ccgtccgccg attccgaaca gcagcttccc
      301 gcgattggca acgagcgtcg catccacctc gggatcgagc agtgtcgccc agcccggctc
      361 gagccctgcg acgtcagcgc catcgatccc ccttggaagc agctgcccgg ccacagcgtt
      421 cagcctcggc tcggcgggcg gagccttctc atcgagcgct tccagctgct cgcgccacca
      481 agcgagcttg atccgcccca gcgccggctc ggtcgatcgc gcgacgacgt cggccatcgc
      541 gcagtcaact tcaaagagtg cgcgaaaaac cggctgcagc tgctcgcgca tgtgaatcag
      601 cgccagctcc tggtcggggc taatcgcggt agctgaccgt cttggccgcc tcgaccacgt
      661 cctcggcctt gatcagcgcc atcttctcga gattggcggc atagggcagc ggcacgtccg
      721 cgtcggtcac ccgaagcacc ggcgcgtcga ggtcgtcgaa gccctcggtc atcgcgatgg
      781 cgatgatctc cgagctgatc gagcaggtcg gccagccctc ctcgaccacc accatccggt
      841 tggtcttggc gaggcttttg agcaccgttt ccttgtcgag cggccgcaag gtgcgaagat
      901 cgatgacctc ggcatctatc ccttctgaaa gcagctgctt cgccgcctcc agcgccaccc
      961 cgacgccgat cgaatagctg acgagggtga cgtccttgcc cgggcgcacc accttcgcct
     1021 tgccgatcgg aagcacgtaa tcgtcgactt ccgggacgtc gaaatgctgg ccgtacagca
     1081 gctcgttctc gaggaagacg accgggtctt cgctccggat cgcagctttc agcagtccct
     1141 tggcgtcggc tgcactatac ggcgcgatca ccacgagtcc cggcacgctc gcataccacg
     1201 gcccgtaatt ctggctgtgc tgggcggcaa cgcgggcggc ggcgccattg gggccgcgga
     1261 acacgaccgg gcagcgcatc tgcccgcccg acatgtagtt cgtcttcgcc gccgagttca
     1321 cgatgtggtc gatcgcctgc atcgcgaagt tgaaggtcat gaactcgacg atcggccgaa
     1381 ggccgcccat cgccgccccg gtccccagcc ccgcgaagcc atattcggtg atcggcgtat
     1441 cgacgacccg cttcggcccg aactcctcga gaagcccctg cgtgaccttg taggcgccct
     1501 ggtactcggc gacctcctcg cccatgacga acacgcgctc gtcgcggcgc atttcctccg
     1561 ccatcgcgtc gcgaagcgcc tcgcgaacgg tgacatcggc cattgtcgcg ccttcggggg
     1621 catcgggccg gtcgtcgtcg cttgtttcgt cgacatcgcg gacgaggtcg cgagcagcgg
     1681 tctccatctt gtgcggcgtg ggagtggcct cggcctgctg ggattccggc tccggtatcg
     1741 acggctcgtt ttttgccgcc gtcttggcct gcgcctcggg ctcgtgcttc gggccggccg
     1801 gcgcttcgcc gccttcggtt tcgaggagcg cgatcgcctc cccgaccttt accccatcgg
     1861 tgccctcggg caccaggatc ttcgcgatct tgccttcgtc gacggcctcg aactccatgg
     1921 tcgccttgtc ggtctcgatc tcggcaagga tgtcgccgga gctgacctcg tcgccctcct
     1981 tgaccagcca cttggcgaga gtcccttcct ccatcgtcgg agacaaagcg ggcatcttca
     2041 gctcgagcgc catcagtacg tccccaccag cacgtcggta taaagctcgg ctgcttccgg
     2101 ctcgggcgcg tcctcggcga atttcgcggc ttggacgatg atctccttga tttccttgtc
     2161 gatcgctttg agctcgtctt ccttcacgcc catcttttcg agcgccttgg ctgcatgctc
     2221 gatcgggtcg cgctgggtgc ggatatcctg gacctcttcg cgtgtccgat acttggccgg
     2281 gtcggacatc gaatggccgc gatagcggta agtcatcagc tcgaggatga tcggcccctt
     2341 ctcgcgcgcc cattcgagcg ccatttccgc cgcaccgcgc actgccagca cgtccattcc
     2401 gtcgacccgg atgccgggga tccggaagct ttcgccacgc ttgtagaagt cgggctcgga
     2461 agccgagcga gcgaccgagg tgcccatcgc atattggttg ttctcgatcg cgtagatgat
     2521 cggcaggttc cacagctttg ccatgttgaa cgcctcgtac acctgcccct ggttcgcagc
     2581 cccatcgccg aaataggcga ggcacacgcc gccgtcctcg cgatatttgt gcgcaaaggc
     2641 gaggcccgtc ccgagcggca cctgggcgcc gacgatgccg tggccgccat agaatccgtg
     2701 ctcgacgctg aacatgtgca tcgagccgcc tttgcccttc gagattcccg cttcgcggcc
     2761 ggtcagctcg gccatgatca ccttggggtc gatcttgtag gcaagcatgt gcccatggtc
     2821 gcgatagccg gtaatgacgc tgtccttgcc gaccgtcatc gccgattgca gtccgaccgc
     2881 gaccgcttcc tggccgatgt acaggtggca gaagccgccg atcagcccca ggccgtaaag
     2941 ctgtcccgcc cgctcctcga agcggcggat caggagcatc tccttataga attcgagcag
     3001 ctggtccttg tccgcctcga agcgcttcgg ctcgggcggg cgggccattc tctgttcggc
     3061 cggcggtgcg gctttctcgg gcttggcttt ggttttcgaa gctttggcgg attgcgccac
     3121 gggcaattct ctcgggcagt gacggagcgc cgcgtctata ggtgcgccgc agttgggcgg
     3181 caacaggggc tagttgagcg ggacgataat ctcgtcggga cgaaccagcc cgaggtcgcg
     3241 ccgggcaagc tcgtcggcca ggtcgggatc ggccttcctg ggatcgagaa gcttcgagcg
     3301 gtgacggagc tgcgccttct gctcttccag tttggcgagc tcgatcttcc gctcattgag
     3361 gtcgcgatga tagccgcccc aggcgagtat gccgttcggt ccggcgatcg cgtaaccagc
     3421 gaaattgccg acgacgagaa gcgccatcgc cggccagaac atccggcgga tcagtccgat
     3481 actgcgcttg ccacccatcg cgtcttcagg agaatcacga ctgagtcccg aacgcaagca
     3541 aaatccgtgg tttggcgttc taagttgtgc atcaaccgcg acggtacgcc ttgatcgcct
     3601 cagctcccgg ataaaccgcc cggtctccga ggccttcctc gatgcgcagg agttggttgt
     3661 actttgcgac ccggtcggat cgggcgaggc tgcccgtctt gatctggccc gtgcccaggc
     3721 cgacggcgag gtcggcgatg gtcgagtcct cggtttcacc ggagcgatgg gacatcaccg
     3781 ccgtgtaatt gtggccttgc gccagccgta tcgccgcgat cgtttccgtc agcgtcccaa
     3841 tctggttgac cttgatcagg atcgaatttg cgacgccatc ctcgatgcct cgggcgagcc
     3901 gcttgacgtt ggtgacgaac aaatcgtccc cgaccagctg cacccggtcg ccaagccgct
     3961 cggtgatcgc cttccagccc gcccagtcgt cctccgccat gccgtcctcg atggaggcga
     4021 tgggatagtc cgcgaccagc ttttcgaaat agtcgaccat ttcgtcggag cccagcgaca
     4081 gcgcctcgcc ttggagctgg tacttgccat cgcgataata ttccgtcgaa gctgggtcga
     4141 gcgcgatcaa aacgtccttt ccggcactgt agccggccgt ctcgatcgaa ccgatgatga
     4201 agtcgagggc atcgcgggcc gacttgaggt ccggcgcaaa tccgccctcg tcacccacgg
     4261 cggtggacaa tcccttcgag tgcaaggcgg acttcagtgc atgaaagact tcggtgccgc
     4321 agcgcagcgc ttccgaaaag ctggcggcgc cgaccggcat gatcatgaat tcctggaaat
     4381 cgatcggatt gtccgcgtgt gccccgccgt taacgatatt catcatcggc accggcagca
     4441 tggccgccgt gccatcgccg agatagcgat agaggggtaa cccagccgcc ttcgccgccg
     4501 ccttggcgca ggcgaggctg acccccagga ttgcgttggc cccgaggcgt cccttgttgt
     4561 cgctcccgtc gagcgcgatc atcgaggaat cgatctcgcc ctggtcctcc gcatcgtggc
     4621 cggtcagcgc ttcggcgatt tccccgttca ccgaccgcac cgctttctcg acgcccttgc
     4681 cgccccagcg gtccttgtcg ccgtcgcgaa gctcgaccgc ttcgtgggcg ccagtcgatg
     4741 caccggacgg caccgctgcg cggccgaaac tgccgtcttc cagcgtcaca tcgacctcga
     4801 ccgtcgggtt gccgcggcta tcgaggatct ggcgtccgcg gatggcagtg attgcagtca
     4861 tggaattcct tcttacgtaa gcgtaatgaa ctggaccgaa gctggagatt cccgggcggc
     4921 tataggcccg ctcgcgaccc gcgcaacttt cgccgggtaa actgcggaac gagcgcgaca
     4981 gtgcagggtt gaactcccca aggaggactg acgaaatggc gcagcaagac agagaccttc
     5041 cggaaggcac cgacacggtg atccccgggg caatggatac ggacaccagc gacgtgacag
     5101 gttcgaccgg ccgcggcggc aaggggcgtt cgactcgcaa gtctgcctcg acggggtcca
     5161 gagcgggcac cgggctgatg gaaaaggtcc gcagcggaag tgacaagcta tccgaggaag
     5221 cggccggaaa ggcgcgcggc ttcgtcggcc aggggatcga acggtcggcc gaagcgctgg
     5281 cgaatgtcgg caagctggtc ggtgagactg ccaccggact cgatgagcgt ctgggcgaag
     5341 agtatggcga ctatgcgcga aaagccgccg aaacccttga gagcaccgcg aacaggcttg
     5401 cctcgaagga ccccgacgag ctgatcgacg atacacgcaa cttcatccgc aagagccccg
     5461 gcgtggcgct ggcaggcgca gcgattgtcg gcttcgctct tgcccggctg gtgaaatccg
     5521 gcctcgcaag cgacgacaac gacgaagacg gtgacgagga tcgtcggtcg agctcatcgc
     5581 gccgacggag ctgatgctga agccggcgga agaccccacg cgcccgggcg gtgaccgttc
     5641 gatcggcgag cttgcaagcc agctcgttga cgacgccaag tcctatgccc gggccgaggt
     5701 ccatctcgcc aaggcgatcg ccgcggaaaa atcgaagtcg gtggcggtcg cggcggccct
     5761 gttcggggct gcaacgctcg tcgctatcgg tgcggtttgc gccgttagcg tcgcgatcgt
     5821 cgtcgccctt gcctattaca tgacacccct gctcgcaggg cttgccacct tcctcatcct
     5881 cggagcggtc gccgctgcta tcggatggtt cggctgggtg aagctgaggg attcgctgtg
     5941 ac
//
LOCUS       DATAKH010000128        10153 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2745,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000128 DATAKH010000000
VERSION     DATAKH010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 10153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10153
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2745"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..354
                     /locus_tag="VHN55_05250"
     CDS             <1..354
                     /locus_tag="VHN55_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803374.1"
                     /translation="KQIDHLRMQVPDDSGLDMIEPFMGMLITLAAFDLGQDRLPNFAA
                     FRFLYERLVGAASRPWLPAAFCSAAALPHLHPDRRRILLQSISESAATAPGWSSREPA
                     FWPEWVEKVDLKAAA"
     gene            complement(351..842)
                     /locus_tag="VHN55_05255"
     CDS             complement(351..842)
                     /locus_tag="VHN55_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803375.1"
                     /translation="MSRQPHLFLDCDGVLADFDSGAKRILGLTPAAFEERHGRGEFWK
                     RLARARNFYGDLPQMPDAQRLFAAVKHLKPTILTGLPLGKWAAPQKERWAAEHFPGVP
                     IITTMARQKHLHMEKGDVLVDDRENHRHLWEDAGGIFVHHKNAEDSLRQLAQIYPSVK
                     VEA"
     gene            complement(839..1219)
                     /locus_tag="VHN55_05260"
     CDS             complement(839..1219)
                     /locus_tag="VHN55_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803376.1"
                     /translation="MTKSFVTGWKLPPDERERLLERFPPKYERVIADHVTLQVGATES
                     TPLPREFSAEIVGRADDGESLECLVVAMGGTTDRPDGSTYHITWSLGPGRKAKESNDV
                     LREKGWKAIERPIAVELDPARFER"
     gene            complement(1252..2643)
                     /locus_tag="VHN55_05265"
     CDS             complement(1252..2643)
                     /locus_tag="VHN55_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX2803377.1"
                     /translation="MDSSAYFFCGIGGSGMLPLASILRASGVRVSGSDRSLDAGRTAP
                     KFDYLRSLGIQLFPQDGSGLKPGMILVTSGAVEDTVPDVVRGDELGLTHLRRPQLLAK
                     LLNSAHHSVAIGGTSGKSTVTGMTGWILHAAHRQPTVMNGAVMKNFVTPSAPFASALV
                     GDPELFVSEVDESDGSIALYEPEVAVLTNISLDHKEMVELRGLFAGFLAGAKKAVLNL
                     DDPETRALADAIPGEKLVGYGFDSPNADFAGRNLQLQPGGVTFDVDHAGRRHEVRLGL
                     PGRHNASNALAAIAAARQLGVAVADSAAALERFEGLRRRLELVGEAGGVTVIDDFAHN
                     PDKIDAALATMRSQPGRVLILFQPHGYGPISKMGEELAESLANGMGAEDRLYLPDPTY
                     QGGTVERTRGSDWLAEQIAAKGGNAEHVPDRSEIGNRLVAEARPGDRILIMGARDDTL
                     AEFARELVERLER"
     gene            2693..3505
                     /locus_tag="VHN55_05270"
     CDS             2693..3505
                     /locus_tag="VHN55_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008065486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEX2803378.1"
                     /translation="MRIAVVAPSNAMKRDAAEAVEAIVRARGDCEIVFHPQCFLSHGH
                     FAGTDEQRLAALREVMADPAVDAVWFARGGYGSNRIAEAAVRDLPDAARGKTFMGYSD
                     AGFLLAAFHKAGLRTAHGPMALDIARDGGEQAVNRALDWLVRNDPRSLEPRLQSPAMA
                     FNLSVLSTLLATPLEPDFTGVELLIEEVSEHHYRIDRLMFHITSSANVRKAARIRLGR
                     ASDIPGNDPEFDDDEHGIVAFWCDRAGIDMGSPADIGHDSANKVVPFGFANG"
     gene            3577..3846
                     /locus_tag="VHN55_05275"
     CDS             3577..3846
                     /locus_tag="VHN55_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HEX2803379.1"
                     /translation="MAQGTGRKAGGGLARPVQPSADLAKITGSAPLPRSQVVSKIWDH
                     IRKNNLQNPQNKREIVADATLKPIFGGKDRVSMFEMNKHLSNHLK"
     gene            complement(3923..4663)
                     /locus_tag="VHN55_05280"
     CDS             complement(3923..4663)
                     /locus_tag="VHN55_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX2803380.1"
                     /translation="MESSPAIPAATLVVVREVAGGAPELLMVERAEGMAFAGGALVFP
                     GGRIDDNDRELAAGDEAAAAVAAIRETVEETAIPVALSPVPSPELALDMQRELLANQP
                     LARILERQSLALKLEELVAFARWVPKFHATRRFDTLFFLARAPGPGWEPSVIEGECSG
                     ASWITAAKALERDRSGKARLIFPTRRNLERLALHDSFEAMLADAKAHPVAPISPWVEQ
                     VEGENFITIPDGIGYPVTRERLDGLWRG"
     gene            complement(4748..5011)
                     /locus_tag="VHN55_05285"
     CDS             complement(4748..5011)
                     /locus_tag="VHN55_05285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803381.1"
                     /translation="MRKATLAAVAFGVLALAACGRGDQDKLNDADLNAENQSLDELSN
                     DAANLASESQVLENQAEQIEQEAQAADDAAGAETPADENISGM"
     gene            5096..5491
                     /gene="ssrA"
                     /locus_tag="VHN55_05290"
     tmRNA           5096..5491
                     /gene="ssrA"
                     /locus_tag="VHN55_05290"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
     gene            complement(5499..5918)
                     /gene="mscL"
                     /locus_tag="VHN55_05295"
     CDS             complement(5499..5918)
                     /gene="mscL"
                     /locus_tag="VHN55_05295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEX2803382.1"
                     /translation="MLREFKTFVARGNVLDFAVAVILGAAFATITTSLTEDIIMPVIG
                     AIFGGLDFSSYFILLGPVPEGYSGSMTNYAALKAAGAPVLGWGQFVSVAINFVILAFV
                     IFLMVRTANRLIERTPAEAGPTEVELLIEIRDELRKK"
     gene            6008..6610
                     /locus_tag="VHN55_05300"
     CDS             6008..6610
                     /locus_tag="VHN55_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX2803383.1"
                     /translation="MGLLRRFGLFLPLAALALSGCGLNSVPTAEEQVNAEFANLQAEY
                     QRRNDLIGNLVESVKGAAGSEEQILGRITEARSRATSVQLTPEQLDDPQAVQAYNQAQ
                     AGLSSARSLLGTVIMERYPQLQSQQRFADLMVALEGTENRIRTQRRDYNEAVRQYNTR
                     IRTFPDAIGAKIFYGAKPKVPFEAEAGAEEAPTVDFNTAG"
     gene            6612..7439
                     /locus_tag="VHN55_05305"
     CDS             6612..7439
                     /locus_tag="VHN55_05305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010336698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEX2803384.1"
                     /translation="MSRFIVVLWLALVALGVPASAQTFPELTGRVVDQANLLSPAQEA
                     ELTARSEALEQQSGRQFVVATVNSLQDRTIEDYGYRLGRHWAIGREKEDDGVILLVAP
                     NEKKVRIETGYGAEGFLPDILAGRIIRNDILPSFREGDMAGGIMAGADSILKQMSLPP
                     DQARETVAKAEAQEATREQSGGGALPLIFWFMIIGFVLLSMARRAGGRRYRGSKHRSG
                     GISPWVVLWGLNEISRASRHRGGWGGGGGWGGGGGGGFGGFSGGGGSFGGGGASGSW"
     gene            7433..8110
                     /locus_tag="VHN55_05310"
     CDS             7433..8110
                     /locus_tag="VHN55_05310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803385.1"
                     /translation="MVMELTQTDHEKVSKAIAAAESATDGEIVAVAAPLSDSYHDVAL
                     HWAVATLILVLAWAAWRPDWLTWWFDRIFGGWRGEPTLSELLTFLMVLAVLKFTAVLL
                     ILKWMPLRLALTPSATKSRRVRRRAVTIFKTAAERRTVGRTGILIYLSMAEHRAEIVA
                     DSAITDVTTPETWGEAMAALLADVRDGRPGDGICAAVQQIGIVLAEHFPKSTDNPNEI
                     PDKLIEL"
     gene            8107..8634
                     /locus_tag="VHN55_05315"
     CDS             8107..8634
                     /locus_tag="VHN55_05315"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX2803386.1"
                     /translation="MIDDHDAPVETMWAGKYVTALKRGRWEYVSRTDSTKAVVILAEH
                     GGKVILVEQYRVPVGGRCLELPAGLVGDEDKNATVEDTAVKELEEETGFTAGRIEVLG
                     EFHSSPGMIAESFTLVRAHGVRKIGEGGGTEHEDIIVHLVAREDIPQFIQKRREAGAS
                     IDVKLLLFMDFRAAG"
     gene            8745..>10153
                     /locus_tag="VHN55_05320"
     CDS             8745..>10153
                     /locus_tag="VHN55_05320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEX2803387.1"
                     /translation="MKALMLAGSALAALGAGAADAQASTSSSPAGAPPAAAVAVPDNI
                     LLKEWTGPYDGVPPFDKVNPALIPEALQFGIDEQNREVLAIANNPQSPTFANTVEALE
                     KAGERLDRVLSVFGVMTSNMATPEYQALDKEWSPKLSAAYDDIILNPKLFQRVKTLHD
                     NKASLGLDAKQDRLLTRLYDSFVRRGANLDPAKKQQLTEMNQQLAELFATFSERVLAD
                     ESTYITVTEAQLKGVPSDMKAAYASAAKAQGKPAGSFAIKNTRSAVDPLLTYADDRAL
                     REKVWRAFVNRGDNGGKNDTNEIIAKIVKIRADRAKLLGFDNHAEWRMQDTMAKTPER
                     AMDLMMKVWPAAVQRVKEEVAEQQAMADKLGHKITIQPWDYRFYMEKVRKEKYDLSQE
                     EIKPYFSLNNIIDASYWAAGQLYDLGFKEVTGTVPTWHPDIRVYSVTNTKTGEQVGLF
                     YRDDYAREGKRSGAWATTYR"
BASE COUNT         1873 a         3258 c         3231 g         1791 t
ORIGIN      
        1 aagcagatcg accacctgcg catgcaggtc cccgacgaca gcggtctcga catgatcgaa
       61 ccgttcatgg gcatgctgat cacccttgcg gcattcgatc tcggccagga ccgcctgccc
      121 aatttcgccg ctttccgctt cctttacgag cgcctggtcg gcgccgcgtc gcgcccatgg
      181 ctaccggcgg ccttctgctc ggcggccgcg cttccgcacc ttcacccgga ccggcgccga
      241 atactgcttc agtcgatcag cgagagcgcc gcgaccgcgc ccggctggtc gagccgcgag
      301 ccggcattct ggccggagtg ggtcgagaag gtggatctga aggcggcggc ctaagcctcg
      361 acttttaccg acggatatat ctgcgcgagc tgtcgcagcg aatcttccgc gttcttgtgg
      421 tggacgaaaa tccctccagc atcttcccac aggtgccggt gattttcccg atcgtcgacg
      481 aggacgtcgc ctttctccat gtgcaggtgc ttctgccgcg ccatggtggt gatgatcggc
      541 acccccggaa aatgctctgc tgcccagcgt tccttctgcg gcgcagccca tttaccgagc
      601 gggagaccgg tgaggatcgt cggtttcaaa tgcttgacag ccgcgaacag ccgctgggcg
      661 tccggcatct gcggaaggtc gccgtagaag tttcgggccc gcgccagtcg cttccagaat
      721 tcaccccgac cgtgccgctc ctcgaacgcc gccggagtca gcccgagaat gcgcttcgcg
      781 cccgagtcga agtcggcaag cacgccgtcg caatcgagga acaggtgcgg ctgcctgctc
      841 accgttcgaa tctcgccgga tcgagctcga ccgcgatcgg ccgttcgatc gccttccagc
      901 ccttctcgcg aagcacgtcg ttgctttcct tcgccttccg cccgggtccg agcgaccagg
      961 taatgtgata ggtcgagcca tccggccggt ctgttgtgcc gcccattgcc acgacgaggc
     1021 attcgaggct ttctccgtcg tcggcgcggc cgacgatttc cgctgaaaat tctcggggca
     1081 ggggcgttga ttccgttgcg cccacttgga gggtgacgtg atcggcgatc actcgctcgt
     1141 acttgggcgg aaaccgttcc agaagccgct cccgttcgtc gggtggaagc ttccaacctg
     1201 tgacaaagct cttggtcatg ccagcctcaa ctgccgcagc cgctgtgggt ttcagcgttc
     1261 cagccgttcg accagctcgc gagcgaattc ggcaagcgtg tcgtcgcgtg cgcccatgat
     1321 caggatccga tcgcccggcc gcgcttcggc aaccagccgg ttgccgatct cggagcggtc
     1381 ggggacatgc tccgcatttc cgcctttcgc tgcgatttgt tcggccaacc agtcggaccc
     1441 gcgggtgcgt tcgaccgtgc cgccctggta ggttgggtcc ggaagataaa ggcgatcttc
     1501 agctcccatt ccgttcgcca agctttcggc aagctcctcg cccatcttcg aaatcgggcc
     1561 gtagccgtgg ggctggaaca ggatcagcac gcggccgggc tgtgaccgca tcgtcgccag
     1621 cgcagcgtcg atcttgtccg gattgtgcgc gaaatcgtcg atgacggtaa ctccgcccgc
     1681 ttcgccgacc agctcgaggc ggcgcctgag gccttcgaac cgttccaggg ccgccgccga
     1741 gtccgcgacc gcgactccca gctgtcgggc tgcggcgatc gccgccagtg cgttcgacgc
     1801 attgtgacgc ccgggcaggc ccagccgcac ctcgtggcgt ctgccggcgt gatcgacgtc
     1861 gaacgtcact ccgccgggct ggagctggag gttgcggccg gcaaaatcgg cgttgggcga
     1921 atcgaagcca tacccgacga gcttttcgcc cgggatcgcg tcggcaagcg ccctggtttc
     1981 cgggtcgtcg aggttgagca ccgccttttt ggcgccggcg aggaagccgg cgaaaagccc
     2041 gcgaagctcg accatttcct tgtggtcgag gctgatgttg gtcagcaccg cgacttccgg
     2101 ctcgtacagc gcgatcgacc cgtcgctttc gtcgacctcg ctgacgaaca attcgggatc
     2161 gccgaccaga gcgctcgcga acggcgcgga cggagtgacg aaattcttca tcacagcccc
     2221 gttcatcacc gttggctggc gatgcgcggc gtggaggatc cagccggtca ttccggtcac
     2281 cgtcgacttg ccgctggtgc cgccgatggc gacgctgtgg tgggcgctgt tgaggagctt
     2341 cgcgagcagc tgcgggcgcc tcaggtgggt gaggccgagc tcgtcgccgc gaaccacgtc
     2401 gggaacggta tcttcgaccg cccctgaggt taccaggatc atccctggct tgaggcccga
     2461 accatcctgc gggaagagct ggattccgag cgagcggaga tagtcgaact tgggcgcggt
     2521 gcgcccggcg tcgagcgacc ggtcggagcc ggagacccga actcccgaag cccggaggat
     2581 agatgccaac ggaagcatcc cgctgccgcc gatcccgcag aagaaatatg ccgaagagtc
     2641 catggcgagc gccctattgc gcgcgagggc cgctgacaaa taggaagcgc atatgagaat
     2701 cgcggtcgtc gcgcccagca acgcaatgaa gcgcgacgcc gccgaagcgg tcgaagcaat
     2761 cgtccgcgcc cgcggcgact gcgagattgt cttccatccg caatgcttcc tgtcgcacgg
     2821 ccatttcgcc ggtaccgacg agcagcggct tgccgcgttg cgggaagtca tggccgaccc
     2881 ggcggtcgat gccgtctggt tcgcccgcgg cggctacggc tccaaccgga tcgcggaggc
     2941 agcagtgcgc gacctcccgg acgcggctcg aggcaagaca ttcatgggat atagcgacgc
     3001 cggcttcctg cttgccgcgt tccataaggc gggccttcgg acagcgcacg ggccgatggc
     3061 gctggacatt gcccgcgacg gcggtgagca ggcggtcaac cgggccctcg actggctggt
     3121 tcgcaatgat ccgcgctcgc ttgagcctcg ccttcagtcg ccggcgatgg ctttcaacct
     3181 ctccgtgctg tcgacccttc tcgccactcc gctggaaccc gacttcacgg gcgtcgaatt
     3241 gcttatcgag gaagtgagcg agcaccatta ccggatcgac cggctgatgt tccacatcac
     3301 ctccagcgcg aatgtccgca aggcagccag aatccgtctc gggcgagcgt cggatatccc
     3361 cggcaacgac ccggaattcg acgacgatga gcatgggatc gtcgcgtttt ggtgcgatcg
     3421 ggccggaatt gacatgggtt cgccggcgga catcggacac gacagcgcga acaaggtcgt
     3481 gccgttcggt ttcgcgaacg gctgattctt cgagcatcag cattgcaaag aggggcgctt
     3541 tgcgctctac aaacagaaga acaacaggag ggctaaatgg cacaagggac tggtcgtaaa
     3601 gcagggggcg ggttggcccg tccggttcaa ccgtcagccg atctcgcgaa gatcaccgga
     3661 agcgcgcctc tgccgcgtag ccaggtcgtg tcgaagatct gggaccacat tcgcaagaac
     3721 aacctgcaaa accctcaaaa caagcgggaa atcgtcgctg atgcgacgct gaagccgatt
     3781 ttcgggggca aggatcgggt cagcatgttc gaaatgaaca agcacctttc gaaccatctg
     3841 aagtaaactc cagacccact ggggcagaga gggactcgcg gcttccgcgg gtcccttttc
     3901 tttgtgcccc gcagcgactc gcctagcctc gccacagccc gtcgaggcgt tcgcgggtga
     3961 ccgggtagcc gattccatcc ggaatcgtga tgaaattctc accttcgacc tgttccaccc
     4021 acggactgat cggcgcaacc ggatgcgctt tggcgtcagc gagcattgct tcgaagctgt
     4081 cgtgaagcgc aagccgctcg agattgcggc gtgtggggaa gatcagccgc gccttgccgc
     4141 ttcggtcgcg ctccagggcc ttcgccgcgg tgatccatga ggcgccgctg cattcgcctt
     4201 caatgacgct aggctcccag ccgggaccag gcgcgcgggc gaggaagaag agggtatcga
     4261 aacgccgcgt cgcgtggaat ttgggaaccc agcgggcaaa cgcgaccaac tcctccagtt
     4321 tcagcgcgag cgattgccgt tcgagaatcc tggcaagcgg ctggttggcg agcagctccc
     4381 gttgcatgtc gagtgcaagc tcgggagacg gaaccggcga cagcgcgacc ggaatcgcgg
     4441 tttcctcgac cgtttcgcga attgccgcga cggctgccgc ggcctcgtcg ccggccgcaa
     4501 gctctcggtc gttgtcgtca attcgtccgc cagggaacac cagcgcaccc ccggcaaagg
     4561 ccatgccctc ggcgcgctcg accatcagca gctcgggcgc gccgccggcc acctcgcgaa
     4621 ccaccaccag tgtcgccgct ggaattgcgg ggctgctctc catccccggc agttaggcga
     4681 tggcgaagcc gagaaaaagg ccgccggctg gacgaccggc ggccttctgg agacgtgacc
     4741 gacgcggcta catgccgctg atattctcgt cagcgggcgt ttcggccccg gcggcatcgt
     4801 cggccgcttg cgcttcctgc tcgatctgct cggcctggtt ttcgagcact tgcgattcgg
     4861 atgccaggtt ggcggcatcg ttcgacagtt cgtcgaggct ctggttctcc gcgttcagat
     4921 ccgcgtcgtt gagcttgtcc tggtcgccgc gaccgcaggc tgcgagcgca aggacaccga
     4981 atgcaacggc tgccagagtg gctttcctca tctgattccc tcgtttggat tgtggttgac
     5041 cgccaataac agcactcgtc cggcaaatgc cagcggatcg gcgcaaatcg gcggaatcct
     5101 tgcggattcg cgtccgaatc cctatatcgg acggtgccgg ggcgacccgg ctatgtcggt
     5161 agactgttac gtggaatagg catttcggac ccggggggca gtaccccggc gcctccacca
     5221 ccaacagcgg atagcgagca gatttgcgct gttgctgatg ggggcgaaat aggatcgacg
     5281 agtgcaataa agacgtggct gccgatcggt atgagaccac cgtgacggct cataatcaca
     5341 agtgccaacg ataacgaggc gctcgctatt gctgcgtaac tgacggccta acggtctgaa
     5401 gttccaaagc taaagcgcgg tcggacccca ccgggcaaca gaaggggatt ccagcggtcc
     5461 ggagggcacc gggcaacaga agccctccac ctctctcctt atttcttcct cagctcgtcc
     5521 ctgatctcga tcagcagctc gacttcggtc ggacctgcct cggccggagt tctctcgatc
     5581 aagcggttcg ccgttcgcac catcaggaaa atgacgaagg cgaggatcac gaaattgatc
     5641 gccacggaga cgaactggcc ccagccaagc accggcgcgc ccgccgcctt gagcgctgca
     5701 tagttggtca tgctgccgga atagccctcg ggcaccggcc caagcaggat gaaatagctc
     5761 gagaaatcga ggccgccgaa gatcgcgccg atcaccggca tgatgatgtc ttcggtcagg
     5821 ctcgtcgtga tggtcgcgaa ggcagcgccg aggatcacgg ctacggcaaa atcgagcacg
     5881 ttgccgcggg cgacgaacgt tttgaactct ctcagcattg gctcctccac aatcgaacgg
     5941 cagcggcgtt gaatgcgcgc cgcttgggct ctacctattc caaacttcgt tgttcagggg
     6001 aaatgaaatg ggtttgctcc gtcgcttcgg tctctttttg ccgctcgccg cccttgccct
     6061 ttccggttgc ggcctcaact ccgtcccgac ggcggaggag caggttaatg cggagttcgc
     6121 aaacctccag gccgaatacc agcgtcgcaa cgacctgatc ggcaatctcg tggaaagcgt
     6181 gaagggagcg gctggaagcg aagagcagat cctcggccgc atcaccgagg cgcgaagtcg
     6241 ggcgacatcc gtgcagttga cgcccgagca gctggacgac ccgcaggcag tgcaggccta
     6301 caaccaggcg caggccgggc tttcgagcgc gcgaagtctt ctcggcaccg tcatcatgga
     6361 gcgctacccg cagctccaga gccagcagcg tttcgctgac ctcatggttg ctttggaagg
     6421 caccgagaac cgaatccgca cccagcgccg cgactataac gaggcggtcc gccagtataa
     6481 cacgcggatc cggacgttcc cggacgcgat cggcgccaag atcttctacg gagccaagcc
     6541 gaaggtgccg ttcgaggccg aggccggagc ggaagaagcg ccgacggtgg acttcaatac
     6601 cgctggctga ggtgtcccgc ttcattgtcg tcttgtggct ggcgctggtt gcgctcgggg
     6661 ttcccgcttc ggcgcagacg ttccccgagc tgaccggccg cgttgtcgac caggccaacc
     6721 tgctctcgcc cgcgcaggag gcggagctga cggccaggag cgaagccctc gagcagcagt
     6781 cggggcggca attcgtcgtc gccaccgtca acagcctcca ggaccgcacc atcgaggatt
     6841 acggctaccg gctcggccgc cactgggcga tcggccggga aaaggaggat gacggcgtca
     6901 tcctgctcgt cgcgccaaac gagaagaagg tgcgcatcga aaccggctat ggcgcggaag
     6961 ggttcctccc cgacattctc gccggccgga tcatccgcaa cgacatcctg ccttcctttc
     7021 gcgaaggcga catggccggc gggatcatgg ccggcgccga ttcgatcctc aagcagatga
     7081 gcctcccgcc cgaccaggct cgcgagactg tcgcgaaggc cgaagcgcag gaagcgacgc
     7141 gggagcaatc gggcggaggc gccttgccgc tgatattctg gttcatgatc atcggcttcg
     7201 tactgctttc gatggctcgg cgagcaggcg gtcgccgcta ccgaggcagc aagcaccgca
     7261 gcggcggcat tagcccgtgg gtcgtgttgt ggggcctcaa cgaaataagc cgcgcctctc
     7321 gccatcgcgg cggctggggt ggaggtggcg gctggggggg cggcggcgga ggtggattcg
     7381 gcggcttttc gggcggcggc gggtcgttcg gcggcggcgg ggcgtcggga tcatggtgat
     7441 ggagctcacg caaaccgacc acgaaaaagt cagcaaggcg attgccgccg cggaatctgc
     7501 gaccgacggc gaaatcgtcg cggtcgccgc gccgctcagc gattcctacc acgacgtggc
     7561 gctccactgg gcggttgcca cgctgatcct ggtccttgcc tgggccgcgt ggcggcctga
     7621 ctggctgacc tggtggttcg accgcatctt cggcggctgg cgcggcgagc caacgctgag
     7681 cgagctcctg accttcctca tggtcctcgc agtgctcaag ttcaccgcgg tgctcctgat
     7741 cctcaaatgg atgccactaa ggctggccct caccccgtcg gcgacgaaaa gccgtcgggt
     7801 ccgacgccgc gccgtcacta tcttcaagac agccgcagaa cggcgaacgg tcggccgaac
     7861 cggaatcctg atctatttgt cgatggccga gcaccgcgca gagatcgtcg ccgacagcgc
     7921 cataactgac gttacaactc ccgaaacctg gggcgaggcg atggccgcgc tgcttgccga
     7981 cgtccgcgac ggccgccccg gcgacggcat ttgcgccgcg gtccagcaga tcgggatcgt
     8041 gctcgcggaa catttcccca agagcaccga taaccccaac gagattccgg acaagctgat
     8101 cgaactatga tcgacgacca tgacgccccg gtcgaaacca tgtgggcagg caaatatgtc
     8161 accgccctga agcgtggccg ctgggaatat gtgtcgcgaa ccgacagcac gaaagcggtc
     8221 gtcattctcg ccgagcacgg cggcaaggtc atactcgtcg agcaatatcg cgtcccggtc
     8281 gggggccgct gccttgagct tcccgccggg cttgtcgggg acgaagacaa gaacgccacc
     8341 gtcgaggaca ccgctgtcaa ggagcttgag gaggaaactg gcttcaccgc cgggcggatc
     8401 gaggtgctcg gcgaattcca cagctcgccg ggaatgatcg ccgaaagctt cacgctcgtc
     8461 cgcgcccacg gagttcgcaa aatcggcgag ggcggcggca ccgagcatga ggacatcatt
     8521 gtccacctcg tcgcccgcga ggacattcca cagttcatcc agaagcgccg cgaggcggga
     8581 gcgtcgatcg acgtgaaact actgcttttc atggactttc gagccgcggg ctaagccgag
     8641 gttcagttcg caaacgatac aagtcgttcg tcgaaggcgc acttgcgttc gatctgcgcc
     8701 gcttcctaag cggcttcact gatatttttc gggagtgggg attcatgaag gcactgatgt
     8761 tggctggatc ggcgctcgca gcgctcggcg cgggcgctgc cgatgcacag gcaagcacga
     8821 gttcgtctcc ggcgggcgcg ccgccggccg ccgccgtcgc ggtgccggac aacatcctcc
     8881 tgaaggagtg gaccgggccc tacgacggtg ttccgccgtt cgacaaggtc aacccggcgc
     8941 tgatccccga agcgctccaa ttcggaatcg acgagcagaa tcgggaggtg cttgcgatcg
     9001 ccaacaatcc gcagtccccg actttcgcca ataccgtaga ggcgctggag aaggcgggcg
     9061 agcggcttga tcgcgtgctg tccgtgttcg gggtcatgac cagcaacatg gcgacccccg
     9121 aatatcaggc gctcgacaag gaatggtcgc cgaagctgtc cgccgcttac gacgacatca
     9181 tcctcaatcc caagctcttc cagcgcgtga agactcttca cgataacaag gcttcgctcg
     9241 gcctcgacgc caagcaggac cggctcctga cccgcctcta cgacagcttc gttcgccgcg
     9301 gcgccaacct cgatccggcg aagaagcagc agctcaccga gatgaaccag cagctcgccg
     9361 agctgttcgc gaccttttcg gagcgcgtgc ttgccgacga gagcacttac atcaccgtca
     9421 ccgaggcgca gctgaagggc gtcccgtccg acatgaaggc cgcctatgcc tccgccgcca
     9481 aggcgcaggg caagcctgcc ggcagcttcg cgatcaagaa cacgcgctct gcagtggacc
     9541 cgctgctgac ctacgccgac gaccgggccc tgcgcgaaaa ggtttggcgg gcgttcgtca
     9601 atcgtggcga caatggcggc aagaacgata ccaacgaaat catcgccaag atcgtcaaga
     9661 ttcgcgccga tcgcgccaag ctgctcggct tcgacaacca tgccgagtgg cggatgcagg
     9721 acacgatggc caagacgccc gagcgggcga tggacctgat gatgaaggtc tggccggcgg
     9781 ctgtgcagcg ggtgaaggag gaggtcgccg agcagcaggc gatggccgac aagctcggcc
     9841 acaagatcac gatccagccc tgggactatc gcttttacat ggagaaggtc cgcaaggaga
     9901 aatacgacct cagccaggag gagatcaaac cctacttctc gctgaacaac atcatcgacg
     9961 cgtcctactg ggcagcgggg cagctttacg atctcggctt caaggaggtt accggtacgg
    10021 tccccacctg gcatcccgac atccgagtct attcggtgac gaacacgaag accggcgagc
    10081 aggtcgggct gttctaccgc gacgattatg cgcgcgaggg caagcggtca ggtgcgtggg
    10141 cgacgactta ccg
//
LOCUS       DATAKH010000129         2512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32351,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000129 DATAKH010000000
VERSION     DATAKH010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32351"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1292
                     /gene="sppA"
                     /locus_tag="VHN55_05325"
     CDS             <1..1292
                     /gene="sppA"
                     /locus_tag="VHN55_05325"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEX2803388.1"
                     /translation="AAVEPYTRSDMSPEARQNAQALGGALLESWREAVVSNRPKAKVE
                     AYMMDPVAALRAAGGDLGKAALGFGLADKIGSHEEYEARLAELGGKDSSSPGGYKKIK
                     LARYVDDVVDDDRTGSIGVVTVAGMIVDGKASAGTAGGDSIGNLIDKAVQEGGVEALV
                     VRVDSPGGSVLASERIRQSILNAKRKDIPVVVSMGNVAASGGYWVSTPADFIYAEPST
                     ITGSIGVFGILPSFEGTLQKLGVGADGIRTTPLSGEPDLLNGPSPAADTLIQAGVESV
                     YRRFLAIVAQSRNKQPAQIDAVAQGRVWDGGTARQLGLVDGFGGMREAIEKAGALAKL
                     SDPASKVRYLERPESFEEMLVGMFASDGAGEVPAQDAFAAIAPETKLTGALVQLRSML
                     SGPRIQVLCLECPPAAEPRVTERDIGFMAAVRELLLG"
     gene            complement(1289..>2512)
                     /gene="lpdA"
                     /locus_tag="VHN55_05330"
     CDS             complement(1289..>2512)
                     /gene="lpdA"
                     /locus_tag="VHN55_05330"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX2803389.1"
                     /translation="ELFEEAAHGTLAKWGVKTSGVEVDLAAMHESKDTAVKGLTGGIE
                     FLFKKNKVEWLKGRAAFEDSHKVKVGDRTVTAKDIIIATGSSVTPLPGVEVDNSKHKI
                     VDSTGALALPKVPKSMVVIGGGVIGLELGSVWRRLGAEVTVVEFLDEILPGMDGEVRK
                     EARKIFKKQGFEFRLGTKVTKAETKGDSVTLTVEPAKGGDSETLEAEVVLVSIGRRPN
                     TEGLGLDKIGLELNKRGQIEVDHDFRTKIEGVWAIGDVTPGPMLAHKAEDEGLAAAEN
                     IAGQTGIVNHAVIPSVVYTYPEIAGVGLTEEEAKEDGEVKTGKFPMLANSRAKTNREP
                     DGFVKVIADAKTDRVLGVWMISTVAGTMIAQAAQAMEFGATSEDIAYTCHAHPTHSEA
                     LKEAAMAVTGKPIHI"
BASE COUNT          397 a          819 c          823 g          473 t
ORIGIN      
        1 aggccgcggt cgagccctac acgcgaagcg acatgtcgcc ggaggcgagg cagaatgcac
       61 aggcgctcgg cggggcgctg ctggagagtt ggcgcgaagc ggtcgtcagc aatcggccca
      121 aggcgaaggt cgaagcttat atgatggatc cggtcgcagc gcttcgggcg gccggcggcg
      181 acctcggaaa ggcggcactg ggattcggtc tcgccgacaa gatcgggagc cacgaagagt
      241 atgaggcccg cttggccgag ctcggcggca aggactcctc ttcgccgggc ggctacaaga
      301 agatcaagct cgcccgctat gtcgatgacg ttgtcgatga cgataggacc ggctcgatcg
      361 gagtggtcac ggtcgccggg atgatcgtcg acgggaaagc ctcggccgga accgccggtg
      421 gcgacagcat cggcaacctc atcgacaagg ccgtccagga gggcggggtc gaggcgctgg
      481 tagtcagggt ggacagcccc ggcggatcgg tactcgcctc cgagaggatc cggcagtcga
      541 tcctgaacgc caagcgcaag gacattcccg tcgtcgtgtc gatggggaat gtcgcggctt
      601 cgggcggcta ctgggtctct acccccgcgg acttcatata tgccgagcct tcgacgatta
      661 cgggctcgat cggggtgttc ggcatcctcc ccagcttcga agggacgctt cagaaactcg
      721 gcgtcggcgc ggacggaatc aggacgactc cgctgtcggg cgagccggac ctgctgaacg
      781 gcccgtcgcc cgccgccgac acgctcatcc aggccggcgt ggagtccgtc taccggcgtt
      841 tcctagcgat cgtcgcccaa tcccggaaca agcagccggc gcagatagac gccgtcgccc
      901 aaggccgcgt ctgggacggg ggaacggctc ggcagctcgg gctagtcgac ggcttcggcg
      961 gaatgcgcga ggcgatcgaa aaggcgggag ccctcgcaaa actgtccgac cccgcgagca
     1021 aggtccgtta tctcgagcgc cccgaatcct tcgaggaaat gctggtcggg atgttcgcca
     1081 gcgatggagc aggagaggtt ccggcgcagg acgcgtttgc cgctatcgca ccggagacga
     1141 agctgactgg cgctcttgtc cagcttcgat cgatgctgtc gggaccgcga atccaggtgc
     1201 tttgcctcga atgcccgccg gccgcggagc cgcgcgtcac agagcgggac atcggcttca
     1261 tggccgcggt ccgggagctg ttgctcggct agatgtggat cggctttccg gtcacggcca
     1321 tcgccgcttc cttgagcgcc tccgagtggg tcggatgggc gtggcaggtg taggcgatat
     1381 cctctgaggt ggcgccgaac tccatcgcct gcgcggcctg ggcaatcatc gtgcccgcga
     1441 cggtgctgat catccacacg cccagcaccc ggtcggtctt tgcgtcggcg atgaccttga
     1501 cgaagccgtc cggctcgcga ttggtcttgg cgcggctgtt ggcgagcatc gggaacttgc
     1561 cggtcttcac ctcgccgtcc tccttggcct cctcctcggt gaggccgacg cccgcaattt
     1621 ccggataggt gtagacgacg ctcgggatca ccgcgtggtt tacgattccc gtctgccccg
     1681 cgatattttc ggcggctgcc agtccctcgt cttccgcctt gtgcgcgagc atcgggcccg
     1741 gcgttacgtc gccgattgcc cagacgccct cgattttggt tcggaagtcg tggtcgacct
     1801 cgatctggcc gcgcttgttg agttccaggc cgatcttgtc gagccctagc ccttcggtgt
     1861 tcggacggcg gccgatcgag acaagcacga cctccgcttc gagcgtttcg gagtctccgc
     1921 cctttgccgg ctcgacggtg agcgtgacgc tgtcgccctt cgtctcggcc ttggtcacct
     1981 tcgtgccgag ccggaactcg aagccctgct tcttgaagat cttgcgtgct tccttgcgaa
     2041 cctcgccgtc cattccgggc aggatctcgt cgaggaactc caccacggtg acctcggcgc
     2101 cgagccgccg ccacaccgag ccgagctcga gcccgatcac cccgccgccg ataacgacca
     2161 tcgacttcgg aaccttcgga agggcgaggg cgccggtcga atcgacgatc ttgtgcttgc
     2221 tgttgtcgac ctcgacgccg gggagcgggg tcaccgaaga cccggtcgcg ataatgatgt
     2281 ctttcgcggt gacggtgcga tcgccgacct tcaccttgtg gctgtcctcg aacgcggccc
     2341 gtcccttcag ccattcgacc ttgttcttct tgaacaggaa ctcgattccg ccggtcagcc
     2401 ccttcaccgc cgtgtccttg gactcgtgca tcgcggcgag atcgacttca acgccgcttg
     2461 tcttcacgcc ccatttggcc agcgttccat gggccgcttc ctcgaacagc tc
//
LOCUS       DATAKH010000130         4308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_25465,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000130 DATAKH010000000
VERSION     DATAKH010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25465"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VHN55_05335"
     CDS             <1..612
                     /locus_tag="VHN55_05335"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX2803390.1"
                     /translation="AEAELGYKRASVDEVDVAGVIAGGGPFEADGHSSALSVMVNGLA
                     DFGNDDGFSGYIGAGVGAARVSEDFSVPAIGRFFDGDRGRFAWQIVAGVRTALSENVD
                     IGLKYRFFNVPSLRYHVDAGDNPDAVAFDIDGRWRSHSLLLSLIYNFAAPVVVPPPPP
                     PPPPPPPPPATQTCPDGTVILATEMCPAPPPPPPPPPPVPERG"
     gene            737..1453
                     /locus_tag="VHN55_05340"
     CDS             737..1453
                     /locus_tag="VHN55_05340"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEX2803391.1"
                     /translation="MRAPTAFTLTAAAALLSACGGAEEGAENRSGDSGQLAEAPAVPM
                     VNASGAIIGQVRGGDSEGGATLLIEARGLPPGVHGIHIHDVGLCEPPGFTTAGSHWNP
                     TGAEHGGDNPKGAHMGDLQNVTVADDGTLRVQVVAPGTYLRTAGRDANAGARQILDAS
                     GASIVIHAKPDDQKTDPSGNSGDRIACAVLGSPEPGAEAMMDVNSAATAGNSVANTAA
                     NSGGNESEAEPPPPPPANSY"
     gene            1543..1722
                     /locus_tag="VHN55_05345"
     CDS             1543..1722
                     /locus_tag="VHN55_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803392.1"
                     /translation="MDQERIVAVGLLTRQDLTRLGPAFSRAWPVEDAPAFADLLREID
                     KADEELMNKEDGSQQ"
     gene            1719..1916
                     /locus_tag="VHN55_05350"
     CDS             1719..1916
                     /locus_tag="VHN55_05350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803393.1"
                     /translation="MTKRDTYDTPSDVVADDGKVEVRGPDAVDVDLTPEAAEETSDRL
                     LNAAMKARGDKRLEDFPHKAK"
     gene            1932..2483
                     /locus_tag="VHN55_05355"
     CDS             1932..2483
                     /locus_tag="VHN55_05355"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX2803394.1"
                     /translation="MRKVTYGGAISLDGFLAGPGEAIDWLRWSDDSAKISAESFRGVD
                     AMLMGRKTFEFGQKMGGGPPIKGVTTYVFSRTWDEGDLQSRLLPGQAAPQLVHDEAAE
                     FVRNLKSEPGGGILVMGGGEIGTALLEAGLVDEVGFSVHPVLLGGGTPAFGPMAGRVE
                     LNLSEARAIGEDCVLLRYRVAGA"
     gene            2634..2834
                     /locus_tag="VHN55_05360"
     CDS             2634..2834
                     /locus_tag="VHN55_05360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803395.1"
                     /translation="MSRDPNLPPDSDYYAARAIEERRLAMASADPKVRAIHLSMAEKY
                     AELAKTGGQEPAQVIGEQQNRA"
     gene            complement(2858..3070)
                     /locus_tag="VHN55_05365"
     CDS             complement(2858..3070)
                     /locus_tag="VHN55_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803396.1"
                     /translation="MATYRLYCLDGVDKVASAEWLEAEDDETALQDAEGLRAGRACEL
                     WQADRLVARLPDGRTSGDGELAPGLG"
     gene            complement(3294..3953)
                     /locus_tag="VHN55_05370"
     CDS             complement(3294..3953)
                     /locus_tag="VHN55_05370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803397.1"
                     /translation="MRILTLLAATVAVGAMAVPAAAQSTYPYQSYPVQQAYPYAQPVP
                     QPYPGQPGYGYAQPGYAQPYAANPIEQIVNQLLGNNSNYTVTDRSFVQRCASAAMAQA
                     QRQYRPAYGYNGYGQQRYGQPYANNGYNNGYNNGHSQMRVTAITQVHRSRNRRLQIQG
                     LIDTGARAAPYGYAYGYPGQQRQVDPRYAQADLSFRCNVDYRGGISGLRVSRYNAAYR
                     R"
     gene            4103..>4308
                     /locus_tag="VHN55_05375"
     CDS             4103..>4308
                     /locus_tag="VHN55_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803398.1"
                     /translation="MTQTADAALQDELFEIEEGFWLKGEDYFLAHVDERCLLAFPTMP
                     DFHGVHSREEVAATAKQPNRWSDL"
BASE COUNT          764 a         1352 c         1505 g          687 t
ORIGIN      
        1 gctgaagccg aactcggcta caagcgggca tccgttgacg aggtcgatgt cgcgggcgtc
       61 atcgctggtg gcgggccgtt cgaggccgat ggccacagca gcgccttgtc ggtgatggtg
      121 aatggcttgg ccgatttcgg caacgacgac ggcttcagcg gctatatcgg ggccggtgtc
      181 ggcgccgcac gtgtaagcga ggacttcagc gttcccgcga ttggcaggtt cttcgacggt
      241 gatcgcggcc gcttcgcttg gcagatcgtt gccggcgttc ggactgcact gtctgaaaat
      301 gtcgacattg gtctgaagta ccggttcttc aacgtgccca gcctcaggta tcacgtcgac
      361 gctggcgata atcccgacgc cgttgccttc gatatcgatg gccgttggcg gtcgcacagt
      421 ttgctgctga gcctgattta taacttcgcg gcgccggttg ttgtgcctcc gccgccgccg
      481 ccgccgccac cgccgccgcc gcctccggcg acgcagacgt gcccggacgg aacggtgatc
      541 ctggccacag agatgtgccc ggctccgccg cctccgcccc cgccgccgcc gccggtgccc
      601 gagcgcggtt aagcgcaagc ggcagcgaaa gctgcgacga ccaagacagc cggtccggtg
      661 gttcgccacc gggccggttt tcttttgaac catcgcgccc gagtgccgtt ggtcggcaaa
      721 caaggaggga tgcccaatgc gcgcaccaac agcattcacc ctgaccgcag ccgcggcgct
      781 gctttccgcc tgcggaggcg cggaagaagg cgcggagaac cgaagcggcg acagcggcca
      841 gctggccgag gctccggcgg tgccgatggt caacgccagc ggagcgatca tcggccaggt
      901 ccggggcggc gattccgaag gcggagcgac gctgctgatc gaggcccgcg gcctgccacc
      961 gggagtccat gggatccaca tccacgacgt cggcctgtgc gagccgcccg gattcaccac
     1021 cgcagggtcg cactggaacc cgaccggcgc cgagcacggc ggcgacaatc ccaagggcgc
     1081 acacatgggc gacctccaga acgtgaccgt cgccgacgac ggaacgcttc gggtccaggt
     1141 ggtagcgccg ggcacctatt tgcggaccgc cggccgcgac gccaatgccg gcgcccgcca
     1201 gatcctggac gcgagcggag cgtcgatcgt gatccacgcc aagcccgacg accagaagac
     1261 cgaccccagc ggcaacagcg gcgaccgaat cgcctgcgcc gtgctgggaa gcccggagcc
     1321 gggagcggaa gcgatgatgg acgtcaattc agcggctact gccggcaact cggtcgcaaa
     1381 cacggcggca aacagcggcg ggaacgagtc cgaggccgag ccgccgccgc cgccgccggc
     1441 aaacagctat tagcgttcgc aggtaagcga gaattcggcg aagcgaccga taaaggggag
     1501 aaatctcggc accggcagca actgccggga gtttaatcgc acatggatca ggagcgcata
     1561 gtcgcggtgg gactcctgac tcgccaggac cttacccgtc tcgggcccgc tttttcgcgg
     1621 gcgtggccgg tcgaggacgc gcccgccttc gccgatctcc tgcgcgagat cgacaaggcc
     1681 gacgaggagc tcatgaacaa ggaggacggc agccagcaat gaccaagcgc gacacgtacg
     1741 acactcccag cgacgtggtg gccgacgacg gcaaggtgga ggtccgcggc cccgatgcgg
     1801 tcgacgtcga tttgactccc gaagcggccg aggaaacgtc ggaccggctg ctcaacgcgg
     1861 cgatgaaggc gcgcggcgac aagcggctgg aggatttccc ccacaaggcg aaatagtcgc
     1921 gcgaacggca aatgcggaaa gtgacctatg gcggagcgat cagcctggac ggtttccttg
     1981 cggggcctgg cgaggcgatc gactggctgc gctggagcga cgattcggcg aagatcagcg
     2041 ccgaaagctt ccgcggcgtc gatgcaatgc tgatggggcg caagaccttc gagttcgggc
     2101 agaaaatggg cggcggccca ccgatcaagg gtgtgacaac ctacgtcttt tctcgaacct
     2161 gggacgaggg cgacctgcag tcccggctgt tgcccggaca ggccgcaccg cagctggtcc
     2221 acgacgaagc cgccgagttc gtccgcaacc tcaagagcga gcccgggggc ggtatattgg
     2281 tcatgggagg aggagagatc ggtacagcac tgctggaagc gggactggtc gacgaggtcg
     2341 gcttttcggt gcaccccgtg cttctcggcg gtggaacgcc ggccttcggc ccgatggccg
     2401 gccgggtcga gctgaacctg agcgaggctc gggcgatcgg cgaggactgc gtgcttttgc
     2461 gctaccgggt ggcgggcgca tagcggccgg gtacggcgaa gtggcgggaa actgccgtat
     2521 taggctgacc ccgcaatccc gtgctacaac gcggtcattg ccggccttcc acttcagcgc
     2581 gccggcgaac gagagacaga tgagagctcc cgctgcgtaa tgggagccta ggtatgtccc
     2641 gtgatccaaa tttgcccccc gattccgatt attacgcggc ccgagcaatc gaggagcgcc
     2701 ggctggccat ggcttcggcc gacccaaagg tccgcgccat ccacctgtcg atggccgaga
     2761 aatatgccga gctcgccaag acaggcgggc aagagcccgc gcaagtcatc ggcgaacagc
     2821 aaaaccgcgc ctgagcgcag aaagccgttc cgctaaccta tccgaggcca ggcgcgagtt
     2881 cgccgtcgcc gctggtgcgc ccgtccggga ggcgcgcaac cagccggtcg gcctgccata
     2941 gctcgcaggc acgcccggcg cgcaatcctt ccgcgtcctg aagggcggtc tcgtcgtctt
     3001 ccgcttccag ccattcggcg gacgcgacct tgtccacccc atcgaggcag taaagcctgt
     3061 aggtagccac tttccaaaac cctgtttttc ctgccgccga agcgacgttt cgcaaagcta
     3121 acgacgccgt ttggaaaccg tcccgacggt ttacgacgag ccgttgcgcg ccgtcgcccg
     3181 ccggtagatt tattggattt tttgggaccg ccggcgacgg cgagaagtcg cgcgccgggc
     3241 gcaagaaagc ggccgggaga atgtcccccg gccgccattg gaacgcctaa gacctagcgg
     3301 cggtaggcgg cgttgtatcg gctcacccga agcccgctga tcccgccgcg ataatcgacg
     3361 ttgcagcgga acgagaggtc ggcctgggca tagcgcggat cgacctggcg ctgctggccg
     3421 ggatagccgt aagcgtagcc gtagggcgcg gcacgggcgc cggtatcgat caggccctgg
     3481 atctggagcc ggcgattgcg gctgcggtgg acctgggtga tcgcggtgac ccgcatctgc
     3541 gaatggccgt tgttatagcc gttgttatag ccgttgttcg catagggctg gccatagcgc
     3601 tgctggccgt agccgttgta gccgtaggcg gggcgatact ggcgctgggc ctgggccatg
     3661 gccgccgatg cacaacgctg cacgaagctg cgatcggtga cggtgtagtt gctgttgttg
     3721 ccgagcagct ggttgacgat ctgctcgatc gggttggccg cgtagggctg ggcgtagccg
     3781 ggctgggcat agccgtagcc gggctggccg ggatagggct gcgggacagg ctgggcatag
     3841 gggtaagcct gctgcaccgg gtagctctgg tacggatagg tggactgcgc tgctgccggt
     3901 acggccatcg cgccgaccgc aacagtggcg gccaggaggg tgaggattct catacgtatt
     3961 tccttggtct ccaccgggaa acgccgggga gttggtgcta taacgcgcca acacgcgtgt
     4021 cgggggcctg aatggcggcg gggggtgccg ttcatgtggc ggtgaccggg aacggcgggg
     4081 ccgcggattc cgtttgcctg ccatgaccca gaccgccgac gccgcgctcc aggacgagct
     4141 gttcgagatc gaggaggggt tctggctgaa gggcgaggat tatttccttg cccatgtgga
     4201 cgagcgctgc ctgctcgcct tcccgacgat gccggacttc cacggagtcc actcgcgcga
     4261 ggaggtggcg gcgacggcga agcagccgaa ccgctggagc gacctgaa
//
LOCUS       DATAKH010000131         3406 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_4842,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000131 DATAKH010000000
VERSION     DATAKH010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3406
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4842"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1415)
                     /locus_tag="VHN55_05380"
     CDS             complement(<1..1415)
                     /locus_tag="VHN55_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007714945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2803399.1"
                     /translation="MRFPLLFASAAALALAACGNTAADNGGANQSAAGDLSQVDDKSL
                     EEQVTAALDDAPKHGLTKDLFLKGELPADEGRRRQALLNAAKDYASALASGKTDPAKL
                     RDVYTVPRPKVDIDSGLSKALSENKYREWVNSLAPQTDEYRALGEAFAALVNRSPDLP
                     DDDIPGGGTIDKGDSDERLPLIVRNLKAQGYLPTGEQQGETQTQGLDGTRYTPAIAQA
                     VARFQADSGLKPDGVIGSGTIEALNQGPRDRARTLAVAMERLRWLERNPPATRIDVNT
                     AGTYLDYYRDGQHADRRKVVTGQPGWETPQLGSPIYQLVANPTWTVPDSIVEDEISKK
                     SGSWLAANNFVRKDGRYVQQPGPKNALGEVKFDMKNDHAIYLHDTPAKALFSQDERHR
                     SHGCVRVEGALDFARTLAEADGVLDKFDKAMATGEETFVDLNTEIPVRLMYHTAYLGD
                     DGRIHYAEDAYGWDNDIATALG"
     gene            complement(1499..>3406)
                     /locus_tag="VHN55_05385"
     CDS             complement(1499..>3406)
                     /locus_tag="VHN55_05385"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2803400.1"
                     /translation="ASITAGLGVAALGLVVVLPCVVTWMAAFTAGLSAVLIIARSTIP
                     FESMLAILFTLGVAIFGVLAVARWAFTQLKTNADMGSQSESASLLLQEYEQRGVGWLW
                     QVDSENRVTYISSRMVALLNRPANQLLGHSLPSLLGGRAELGSKLLAREPFANLEMEL
                     ETARGPRWISIAGDPIIDTAGRFEGFRGVGSDITEIRQTQERLTHLANVDVLSGLPNR
                     GRVRQLLGEALREATAGNYACAIQFLDLDGFKPVNDTFGHPKGDAVLRAVAKRLVDEV
                     GTLGHVGRMGGDEFAIVVPDAQSRKKVEQMAQRIIDSIKQPYDIDGTTIEIGVSIGCA
                     FGPVDGATVDDLILKADLALYEAKGAGRGIARYFSSELQSEKEDRVRLEADLRSALAA
                     KQFHLVFQPLIAAKSQKLIGFEALIRWNHAKRGLIPPIAFIPVAEEIGLMPAIGEWVI
                     EEACRAAASWPENISVALNVSPKQIVLPNLPNVVSEALTRHRVQGNRIELEVTEGVFL
                     GDNGPTLDVLKRLRQLGVGIALDDFGTGYSSIGYLNKAIFHKLKIDGSFVREAGTRAE
                     NVAIIQSIVQLAKSFRMSVTAEGVETPEDFERMRELGCDIIQGYLFGKPLSYAKANEM
                     VNGLAKKRAAG"
BASE COUNT          551 a         1061 c         1173 g          621 t
ORIGIN      
        1 ccgagcgctg tggcgatgtc gttgtcccag ccgtaggcgt cctcggcata atggatccgg
       61 ccgtcgtcgc cgaggtatgc ggtgtggtac atcagccgta ccgggatttc ggtgttgagg
      121 tcgacgaagg tctcttcgcc ggtcgccatc gccttgtcga acttgtcgag cactccgtcg
      181 gcctcggcga gggtccgcgc gaaatcgagc gcgccctcga cccggacgca gccgtggctt
      241 cggtggcgct cgtcctggct gaacagagct ttcgccggcg tgtcgtgaag gtagatcgca
      301 tgatcgttct tcatgtcgaa cttgacctcg ccgagcgcat tcttcggacc tggctgctga
      361 acgtagcggc cgtccttgcg gacgaaattg ttggccgcga gccagcttcc gctcttcttt
      421 gagatctcgt cctcgacaat cgaatccggg accgtccagg tcgggttggc aaccagctgg
      481 tagatcggcg agccgagctg cggagtctcc cagccgggct ggccggtgac taccttgcgg
      541 cggtcggcat gctggccgtc acgataataa tcgagatagg tgccggcggt gttgacgtcg
      601 atgcgcgtgg cgggcgggtt gcgctcaagc cagcgaagcc gctccatcgc caccgccaga
      661 gtgcgggcgc ggtcgcgcgg cccctggttg agcgcctcga tggtcccact gccgatgact
      721 ccgtcgggct tcagtccgga atccgcctgg aagcgtgcga ccgcctgggc gatagcgggc
      781 gtgtagcggg tgccgtcgag cccctgggtc tgcgtttcac cctgctgctc gccggtcggc
      841 aaatagccct gcgccttgag gttgcggacg atgagcggaa gccgctcgtc ggaatcgccc
      901 ttgtcgatcg tgccgccgcc cgggatgtcg tcgtcgggaa ggtcgggcga gcggttgaca
      961 agggctgcga aagcttcgcc caacgcgcga tactcgtccg tctgcggggc gagcgagttc
     1021 acccattcgc gatacttgtt ctcggacagc gccttcgaca ggccggagtc gatgtccacc
     1081 ttggggcgcg ggacggtgta gacgtcgcga agcttggccg ggtctgtctt gccggaggcc
     1141 agcgccgagg catagtcctt cgccgcgttg agcagcgcct ggcgccgccg gccctcgtcg
     1201 gcaggcaatt cgcccttgag gaaaaggtcc ttcgtgagcc cgtgcttcgg cgcgtcgtcg
     1261 agggcggcgg tcacctgctc ttcgaggctc ttgtcgtcga cctgggaaag gtcgcccgcg
     1321 gcggactggt tggcgccgcc attatcggcg gcagtgttgc cgcaggcggc gagcgccagc
     1381 gcggcggcgg acgcgaacag gagggggaaa cgcaagtggg atactccaaa ctactgatgt
     1441 ttggagaaga acaatcgaac gcccgacaac gatccacgcc gccggcgcca aggctcgctc
     1501 agccggctgc gcgctttttg gcgaggccgt tcaccatctc gttggccttg gcgtagctca
     1561 gcggcttgcc gaacagatag ccctggatga tgtcgcagcc gagttcgcgc attcgctcga
     1621 aatcctcggg agtctcgacg ccttcggcgg tcaccgacat ccggaagctt ttcgccagct
     1681 ggacgatcga ctggatgatg gcgacgttct cggcgcgggt gccggcttcg cggacgaagc
     1741 tgccgtcgat cttgagctta tggaagatcg ccttgttgag atagccgatc gacgaatagc
     1801 cggtgccgaa atcgtcgagc gcgatcccga ctcccagctg gcgcaggcgc ttgagaacgt
     1861 cgagcgtggg accgttgtcg ccgaggaaga cgccctcggt gacctcgagc tcgatccggt
     1921 tgccctgcac gcggtggcga gtgagcgcct cgctgaccac attgggaagg ttgggaagga
     1981 cgatctgctt ggggctgacg ttgagcgcca cgctgatatt ctccggccag cttgccgccg
     2041 cccggcacgc ctcctcgatc acccattcgc cgatcgccgg catcagaccg atttcctcgg
     2101 cgaccggaat gaaggcgatc ggcgggatca gcccgcgctt ggcatgattc cagcggatca
     2161 gcgcctcgaa gccgatcagc ttctggctct tggcggcgat cagcggctgg aagacgaggt
     2221 ggaactgctt tgccgcgagc gcggagcgga ggtccgcctc gagccggacc cggtcctcct
     2281 tttccgactg tagctcggac gagaagtagc gggcgattcc gcggccggcg cccttggcct
     2341 cgtagagcgc aaggtcggcc ttgaggatga ggtcgtcgac ggtggcgccg tcgacggggc
     2401 cgaacgcgca gccgatcgac accccgatct cgatcgtcgt gccgtcgatg tcgtacggct
     2461 gcttgatcga atcgatgatc cgctgggcca tctgctcgac cttcttgcgg ctctgcgcgt
     2521 cggggaccac gatcgcgaat tcgtcgccgc ccattcgccc gacatggccg agcgttccga
     2581 cctcgtcgac cagccgcttg gcgaccgcac ggaggacagc gtctcccttc ggatggccga
     2641 acgtgtcgtt gaccggcttg aagccgtcga ggtcgagaaa ctggattgcg caggcgtagt
     2701 tgccggcagt ggcttcgcga agcgcctcgc cgaggagctg ccgaacgcgg ccgcggttgg
     2761 gcaggccgga tagcacgtcg acgttggcga gatgggtcag gcgctcctgg gtctggcgga
     2821 tttcggtgat gtcggagcca accccgcgaa acccttcgaa gcggccggcg gtgtcgatga
     2881 tcgggtcgcc ggcaatcgag atccagcgcg gcccgcgcgc cgtttccagc tccatctcca
     2941 ggttggcgaa cggctccctt gcgagcagct tgcttccaag ctcagctcgg ccgccgagga
     3001 gggaagggag cgagtgaccg agaagctggt tggccggccg gttgagaagg gcgaccattc
     3061 gcgacgaaat gtaggttacg cggttttcgg aatcgacctg ccacagccag ccgacgccgc
     3121 gctgctcata ttcctgcagg aggagcgacg cgctctcgct ctgcgagccc atgtcggcat
     3181 tggtcttgag ctgggtgaaa gcccagcggg cgaccgcgag cacgccgaaa atggcgacgc
     3241 caagggtgaa caggatcgca agcatcgatt cgaatggaat agtgcttcga gcgataatga
     3301 gcaccgccga gaggccggcc gtgaacgccg ccatccaggt gacgacgcac ggcaggacga
     3361 ccacgagacc gagagcggcg acccccaggc ctgcagtgat cgaagc
//
LOCUS       DATAKH010000132         3810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10433,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000132 DATAKH010000000
VERSION     DATAKH010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3810
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10433"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VHN55_05390"
     CDS             complement(<1..454)
                     /locus_tag="VHN55_05390"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HEX2803401.1"
                     /translation="MRKPLLIATAALATAAAGCGQGRAQDGGPTVQRSYQVGAFERIE
                     VAGPFEVEVRTGGAPSVSASGPEKLMDRLVVEVKGDRLLIHPKRDRGIFNWGSGMRGK
                     ATIAVTAPALREASIAGSGGISVDKVTGDSFEGSIAGSGDLNLASLQVQ"
     gene            complement(608..1144)
                     /locus_tag="VHN55_05395"
     CDS             complement(608..1144)
                     /locus_tag="VHN55_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010184199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEX2803402.1"
                     /translation="MAAKALSFDVGDYVVYPKHGVGRVVELQSTEIAGTRLDLYVLRF
                     EKEKMTLRVPVNKADSIGMRKLSSDKTMKDALETLKGKPKVKRTMWSRRAQEYEAKIN
                     SGDLTSIAEVVRDLFRPDDAPEQSYSERQIFEAASSRLARELGAMEEVDEKSALAKIL
                     EILNKAAEIHHRPKEEVA"
     gene            complement(1322..2401)
                     /gene="dinB"
                     /locus_tag="VHN55_05400"
     CDS             complement(1322..2401)
                     /gene="dinB"
                     /locus_tag="VHN55_05400"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010408619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX2803403.1"
                     /translation="MAESPQPIRKIIHVDMDAFFASVEQRDNPGLRGLPVAVGGQHRG
                     VVAAASYEARKFGIRSAMPSVTAKRKCPDLIFVKPRFDAYREVSNQIRAIFADYTDLV
                     EPLSLDEAYLDVSEDRLGLGSARAIAEDIRRRIREETQLTASAGVSYCKFIAKLASDY
                     RKPDGLTVIRPEQGWDFVASLPVARFHGVGPVTARKMEALGIATGADLRAWSLAELES
                     RFGSSGNWYYRICRGIDEREVKPDRPYKSVSAERTFDEDLREPERLAAELDRIAGYAW
                     ARVERAQVAGRTVTLKVKYGDFTLITRSKSFPERVPDQPSFAAAGQSLLAGLLPVHRG
                     IRLLGLGLHNLSDRFDEQSQLRLAF"
     gene            2576..3781
                     /gene="sucC"
                     /locus_tag="VHN55_05405"
     CDS             2576..3781
                     /gene="sucC"
                     /locus_tag="VHN55_05405"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEX2803404.1"
                     /translation="MNIHEYQAKELLAKFGVPVPAGYAAMSVDEAVEAAKKLPGPLWV
                     VKAQIHAGGRGKGTFKELPETAKGGVRLARSVDEVREHSEEMLGKTLVTVQTGPAGKE
                     VNRLYITDGVDIAKEFYLALLVDRETGRIAIVASTEGGMDIEAVAHDTPEKIETLTID
                     PATGLMPHHGRAVSAALGLTGDLAKQANTVVAKLYDAFLGTDASQIEINPLAVTDKGE
                     LLVLDAKVGFDNNAEFRHPDLEDLRDLSEEDPMEIEASKYDLAYIKLDGNIGCMVNGA
                     GLAMATMDIIKLNGAEPANFLDVGGGASKEKVTAAFKIILSDPRVEGILVNIFGGIMR
                     CDIIAEGIVAAAREVDIKVPLVVRLEGTNVQKGKDILASSGLAIIPADDLGDAARKVV
                     AEVKQEVLA"
BASE COUNT          721 a         1250 c         1156 g          683 t
ORIGIN      
        1 attgcacctg cagcgaggcg agattgaggt cgccagatcc ggcgatgctt ccctcgaatg
       61 aatcccctgt gaccttgtcg acgctgatcc ctcccgaacc ggcgatcgac gcctcccgca
      121 aggccggagc ggtcacggcg atcgtcgcct tgccacgcat tccggagccc cagttaaaga
      181 tgccccggtc cctcttggga tggatcagca agcggtcgcc tttcacttcc acgaccagcc
      241 tgtccatcag tttttcgggg ccgctcgccg aaaccgaagg agcgccgccg gtccggacct
      301 cgacttcgaa cggcccggcg acctcgatcc gctcgaaggc cccgacctgg tagctgcgtt
      361 gaaccgtcgg gccgccatcc tgggcccggc cctgtccgca gcctgccgct gccgttgcca
      421 gggctgcggt cgcgatcaac agtggcttgc gcatgcgagt ctctcccttg tgtattagac
      481 gcctaataca gctctgccgg attagcagca agaggtttct ttagcgcacg aaaaagggcg
      541 cggccttcgc ggtcgcgccc ctttcatttc catatatccc gcaacaggtg cggccgatca
      601 gtcgagctta ggcgacttcc tctttgggtc tgtggtggat ttccgcggcc ttgttgagga
      661 tctcgaggat cttggcgagc gcggactttt cgtcgacctc ttccatcgct ccgagctcgc
      721 gcgccaggcg cgacgaagcg gcctcgaaaa tctgccgctc ggaatagctc tgttcgggag
      781 cgtcgtcggg ccggaacaag tcgcggacca cttccgcgat cgaggtcagg tcgccggaat
      841 tgatcttggc ttcatattcc tgggcgcggc gcgaccacat ggtgcgcttc accttgggct
      901 tgcccttcag ggtctcgagc gcgtccttca tcgtcttgtc ggacgacagc ttgcgcatcc
      961 cgatcgagtc cgccttgttg accggcaccc gaagggtcat cttctctttc tcgaagcgaa
     1021 ggacgtagag gtcgagccgg gtcccggcga tctccgtgct ctgcagttca acgacgcggc
     1081 cgacgccgtg cttggggtag acaacgtaat cgccgacatc gaagctcaaa gccttggcag
     1141 ccattcaaag acctttccat ttacggcggt cagagccgac acgttacgta tcgtccccca
     1201 aaacgacacc tgccccctaa gaacaacggg tcgtggctct ccgcctattt aaggttcctg
     1261 ctagtgtggg ccgtcgcgga agcgcgacag cctctgagac gattttatat cacaactggc
     1321 ctcaaaaagc gagtctcagc tgtgactgtt cgtcgaagcg gtcgctcagg ttgtggagtc
     1381 cgaggccaag aagccgaatt ccgcgatgaa cgggaagcaa gccggcgagc aatgactggc
     1441 ccgccgcagc gaagctgggc tggtccggga ccctttcggg aaagctcttg gagcgggtga
     1501 tcagggtgaa gtcgccatat ttaaccttca gcgtcaccgt tcgccccgcc acctgcgccc
     1561 gctcgaccct ggcccaggca tagccggcga tccggtcgag ctcggcggcg agccgctccg
     1621 gctcgcgcaa atcctcgtcg aacgtgcgct cggcgctcac cgacttgtag ggccggtcgg
     1681 gcttgacctc gcgctcgtcg atcccgcggc agatccggta ataccaatta cccgaactcc
     1741 cgaagcgcga ctccagctcg gcaaggctcc acgcgcgaag gtcggcgccg gtagcgatac
     1801 cgagggcctc catcttgcgg gcagtcaccg ggcctacgcc gtggaatcgc gcgaccggaa
     1861 gcgaggcgac gaagtcccaa ccctgttccg gccggatcac ggtcagcccg tcgggctttc
     1921 ggtaatcgga agcgagcttg gcgatgaact tgcaatagga aaccccggcc gaggcggtca
     1981 gctgcgtttc ctcgcggatc cgccggcgga tgtcttcggc gatggccctg gcgcttccaa
     2041 gccccagccg gtcctcgctg acgtcgagat aggcttcgtc gaggctcaag ggctcgacca
     2101 ggtcggtata gtccgcgaag atcgcacgga tctggttcga cacctcgcga taggcgtcga
     2161 accgcggctt gacgaatatc aggtcggggc atttgcgctt ggccgtcacc gacggcatcg
     2221 ccgagcgaat gccgaacttg cgcgcttcgt aagacgcggc cgcgacaact ccgcgatgct
     2281 gcccgccgac cgccaccggc agcccgcgca gccccggatt atcccgctgc tccaccgacg
     2341 cgaagaaggc gtccatgtcg acatggataa tcttgcggat cggctgcggg gactcggcca
     2401 cggtgagaat ttcctgtcct acaggaccct ccggagtcta gcagcgctgc gactcagtcg
     2461 gcatcgcact cgcggccgaa tgtaacaaag tagaagaagt ggaagacccc ccgattcgac
     2521 cccccgccat cgcaaacttt gcatcctttg acccgttctg cttaaggcgc gcgccatgaa
     2581 catccacgaa tatcaggcca aggaattgct cgcgaagttc ggcgtgccgg ttcccgccgg
     2641 ctatgcggcg atgagcgtcg atgaagccgt cgaggccgcg aagaaacttc ccggcccgct
     2701 ttgggtcgtc aaggcacaga tccacgccgg cggtcgcggc aagggcacgt tcaaggagct
     2761 tcccgagacc gccaagggcg gcgtccgcct cgcccgctcg gtcgacgagg tgcgcgaaca
     2821 ttcagaggag atgctcggaa agacgctcgt caccgtccag accggccccg ctggcaagga
     2881 agtgaaccgc ctctacatca ccgatggcgt cgatatcgcc aaggaattct acctcgcgct
     2941 cctcgtcgac cgcgagaccg gaaggatcgc catcgtcgca tcgaccgaag gcgggatgga
     3001 catcgaggcg gtcgcccacg acacgcctga aaagatcgag accctcacca tcgatcccgc
     3061 gaccgggctg atgccgcacc acggccgcgc ggtctctgcg gcgctcggcc tcacaggaga
     3121 cctcgccaag caggcgaaca cggtcgtcgc caagttgtac gacgcctttc tgggcaccga
     3181 cgcctcgcag atcgagatca atccgctggc ggttacggac aagggcgaat tgctggtgct
     3241 cgacgccaag gtcggcttcg acaacaatgc cgagttccgc catcccgacc tcgaagacct
     3301 tcgcgacctc agtgaagagg acccgatgga aatcgaggcg tcgaaatacg acctcgccta
     3361 catcaagctc gacggaaaca tcggctgcat ggtcaacggc gccgggctgg cgatggcgac
     3421 gatggacatc atcaaactca acggcgccga gcccgccaac ttcctcgatg tcggaggcgg
     3481 cgcgtcgaag gaaaaagtca cggcggcgtt caagatcatc ctctccgacc cgcgggtcga
     3541 gggaatcctc gtcaacatct tcggcgggat catgcgctgc gacatcatcg ccgaaggaat
     3601 cgtcgccgcg gcccgcgaag tggacatcaa ggtccccttg gtcgtcaggc tggaaggcac
     3661 caatgtccag aagggcaagg acatcctcgc ctcgtccggg ctggcgatca tccccgccga
     3721 cgatttgggc gatgcggccc gcaaggtcgt agccgaagtc aagcaggaag tgttggcatg
     3781 aaactcctcg tcgcggtcaa gcgggtgatc
//
LOCUS       DATAKH010000133         9605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_18093,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000133 DATAKH010000000
VERSION     DATAKH010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9605
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18093"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="VHN55_05410"
     CDS             <1..505
                     /locus_tag="VHN55_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX2803405.1"
                     /translation="VRDARIAQIYEGTNGIQAMDLVGRKLPKDGGRAIRAFLALVGGE
                     IAEAKAAGDPAGVAAALDPALGDLQSATMWLAQNGMKDPNNAGAGAYPYMDLMGLVSL
                     GWMWMKMAGVSSKALEHGSGDRQFHEAKLATARFYAERELVAATSLRRKVEAGAESVM
                     AIPEEVF"
     gene            691..1134
                     /locus_tag="VHN55_05415"
     CDS             691..1134
                     /locus_tag="VHN55_05415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803406.1"
                     /translation="MTMLKTMIAGGAGLAALVAAAPAAAQYYPYSQYGYGYGYNQRAV
                     AIATQQCTAAVQNRLYTRTGLSGILGQLLGVSGTSARVVSITRVTPRRSTIRVDGLAT
                     SGRMAYNPYGYGAYGALGYAYQPDLRFNCDVDYRGYVRDVDINRR"
     gene            complement(1202..3892)
                     /locus_tag="VHN55_05420"
     CDS             complement(1202..3892)
                     /locus_tag="VHN55_05420"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2803407.1"
                     /translation="MQRSRFAQAVSESIDTPERASVRAALWFDIEAAETPGDESCSES
                     RVAAFDHTALLLGPSHLLLGLSCLVSHPALLGAPLLSNPLVPLGLILLLDGFAAFGLQ
                     WRHRMGIAPHTVSRAMCGYLAGVGVLWTLFGLTVLMNVSPPGPVVSVSIGAGIAMMAL
                     VAITSPPLSVVSAFVATASSSFFSPSPMVPVGVAILSFFLVAYGTAAARTNIAAVRRR
                     LNLDAEARKALTFVDEFENSGRGWFWETNAEGTLSYVSQQLADDFRCEPAELLGRQFT
                     DLLSVDTYTDGAIEERKTLGFHLSTRFPFSDVIVRAGSEQDVHWSLSGNPVFDERGRF
                     LGFRGIGTDLTEQRRNEQEISRLAKFDSLTGLPNRAMMRQTLDEALRNAAHRQKGCSL
                     FLIDLDRFKNVNDTLGHPIGDALLREVGERLKAVLGDYGQVGRLGGDEFEAVLPGTVD
                     IGLLESLSRTLIEHVSRPYVIEGHRVLIGASVGIAIGDPGRACADSLIRNADLAIYAA
                     KGAGRGQHCFYEASMHSEAADRQLLESDMRQAIERGEFEVVYQPIVRAASEEVSGFES
                     LVRWNHPVRGPISPAKFIPLAEECGLIGKIGEWVLKTAVAEAAHWPEHVRIAINLSPI
                     QFNDPGLVDMIARHIDDSKIKPGQVELEITEGVFLADNDDTEGTFARLKKLGVRLALD
                     DFGTGYSSLGYLKKAPFDKIKIDQSFVRGAANPSSRNSAIIRAIVSLAESLEMESCAE
                     GVETHDDLALIRELGCSHVQGFIFGQPVASKEARELANRARVEAAGFQCLRERRHRLM
                     RRAVAMIDGYQEEIRLRNISVTGALIECRRPFAPGTELRIDIVGVGPVTGTVRWAGNG
                     KAGLQFECEFDLARLAPKKEKLNDVTMLTPWYVERRAAER"
     gene            complement(4097..5374)
                     /locus_tag="VHN55_05425"
     CDS             complement(4097..5374)
                     /locus_tag="VHN55_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2803408.1"
                     /translation="MSWLPEPLRIPAFRAFWLARLTSTIAQMAMVIVIGWQVYDIARQ
                     TMEIDEAAFQLGLIGLVQFVPLFVLTPVSGWAADRLDRRHVARAVILLELLCAAILLW
                     ATWSGRISLPILFSVAALLGVARAFAGPALSALAPNLVPRELLPKAIALSSAAWQSGA
                     ILGPAIGGILYDVVPFYSYAFSTVLFAFSAVCLFLIGPVRRTAIEPGRPLRRMIEGLA
                     YVRRNRLVLGAVTLDLFAVLLGGATAMLPLYARDILQVGADGLGPLRAAPAAGATLTA
                     IFFSFRPIKTNVGVKMLSAVVVFGAATAIFGISTWYPLSLAALTLLGAADMFSVYIRQ
                     SLIQLHTPDAMRGRVGAASTLAISASNELGETRSGFTAALLGPVAATVGGGIAAIAVT
                     LIWARWFPELRNARNFEIPEEPPPQDAVVAGGA"
     gene            5443..7197
                     /locus_tag="VHN55_05430"
     CDS             5443..7197
                     /locus_tag="VHN55_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007013482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEX2803409.1"
                     /translation="MKLRHLLLSAATAAFVAGCSTGPVQEAALPDPVAPIAPVAPVAS
                     ASWQDFSNRFVETYLRLNPSFAVYQGRHEYDGQLPDWSPTGLAAQKQFLTSAIAEAQA
                     FDSAAFSAEQRFERDYLVAVARGNLFWLDVADQPHTNPAYYSGSLDPSPYVTVPYAPP
                     EARLKAYTRYLLNVPAALEQMKANLRTPLPISFVDYGKNAFGGYAEYYLGDGLKAWEG
                     IGTAADQAALSAAAKAASEAMKQTTAWVEAQRPQAGTDFALGAERFAQMLRDTEMVDT
                     PLSELEAIGRADLQSNQALLREACGRYAPGKTMPQCMDKMNANKPEGGAVAGARAQLA
                     GLKQFLIEKDLVTIPGPEEAKVEEAPPYNRQNFAYINIPGPFEKTLPSVYYIAPPDPS
                     WPKSVQDAFVGGEADLLFTSIHEVWPGHFLNFLHSNRSPFLFGRVFVGYAFAEGWAHY
                     TEEMMRVAGVGGGTDEVLIGQLSNALLRDCRFLSAIGMHSGQITQEQSFRMFREQCFQ
                     DEGNARQQAARGTYDPAYLNYTLGKLMIRKLRDDWTATRGGRASWKAFHDEFLSFGGP
                     PIPLVRQQMMGGEAKAVF"
     gene            7236..8603
                     /gene="radA"
                     /locus_tag="VHN55_05435"
     CDS             7236..8603
                     /gene="radA"
                     /locus_tag="VHN55_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010546255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEX2803410.1"
                     /translation="MAKAKTRYTCQACGSVTMRWQGQCPDCAEWNTLVQEAAEVTSIF
                     AAKHNLQGGGRKIELVGLDAPARLPDRIVSGVSEFDRAIGGGIVPGSAMLVGGDPGIG
                     KSTLLLQICAKLAACGRSVVYVSGEESAEQVRLRAIRLGLGKSPVRLAAATSVRDVLT
                     TLGEGESPDLLVIDSIQTMHSDLIEGAPGTVSQVRASAQELVRFAKERGTAVALVGHV
                     TKDGTIAGPRVLEHMVDTVLSFEGERSHQYRILRALKNRFGGTDEIGVFAMESEGLTE
                     VANPSALFLTRRGEAVSGTSVFPAIEGSRPVLVEIQALTVRLASGATPRRAAVGWDSG
                     RLAMILAVLEARCGLSFGTTEVYLNVAGGYRLSDPAADLAVAAALVSAMSERPIPSEA
                     VVLGEIALSGEIRPVAHAPLRLKESAKLGFEAAWVPSEVKAVEGIALAHFGNLRLLVD
                     QILGR"
     gene            8617..9045
                     /locus_tag="VHN55_05440"
     CDS             8617..9045
                     /locus_tag="VHN55_05440"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX2803411.1"
                     /translation="MADIHAIIETMEHRWMRAWVTRDIPTLKSLTSRNFRMVIGSKPA
                     VILDYKSWVEAAGTRYRCKSYRFGDVYARNLGPMTVFATQLELEATLDGEDWSGNMWV
                     TDLWRKSRVRRKWHLVERVLSRPDERKEVPAAVRSLQLWR"
     gene            9105..>9605
                     /locus_tag="VHN55_05445"
     CDS             9105..>9605
                     /locus_tag="VHN55_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEX2803412.1"
                     /translation="MTALDIFVILLLVGGGAVGFVRGFVYEVLSLLAWAAAIAMIKLF
                     HTQLSSGLAEPVGTPEGASVLAFALLFVPTFIIVKMLARSIGGKTRRSLLGPVDRALG
                     GGFGVVKGLLAATLFFLFANLATDLIYGPEAERPEWMSSSRTYPLLNASGRAIVDWVE
                     TRRGRGE"
BASE COUNT         1740 a         3058 c         3174 g         1633 t
ORIGIN      
        1 cgttcgcgat gcccggatcg cgcagatcta cgaaggcacc aacgggatcc aggcgatgga
       61 cctggtcggc cggaagctcc cgaaggacgg cggccgagcc atccgcgctt tccttgcgct
      121 ggtcggcggc gagatcgccg aggcgaaggc agccggcgat cccgcgggag tcgcggccgc
      181 actcgatccg gctctgggcg acctgcaaag cgcgaccatg tggctcgccc agaacggaat
      241 gaaggatccg aataatgccg gcgcgggcgc ctatccctac atggacctga tgggactggt
      301 cagcctcggc tggatgtgga tgaagatggc cggagtgtcg tctaaggcgc tcgagcatgg
      361 cagcggcgac cgccagttcc acgaggccaa gctcgcaacg gcccgcttct acgccgagcg
      421 cgagctggtc gctgccactt cgctccgccg caaggtcgaa gcgggcgccg agagtgtgat
      481 ggcgatcccc gaagaggtgt tttagcgagc acctcagccg gagaccgcgc cggttcacac
      541 tcgccgcggt tcaagcgctg ttaaactgcc attcactcgc cgttcagcga tcggcgacgg
      601 gttgcccgct ggttgcggtg gacagggcac cgcccgcgac ggtccgtgcg tttttcacat
      661 gaagagcccc tttttgaaag gagacgggcc atgaccatgt tgaagacgat gattgccggc
      721 ggtgccggcc tcgcagcgct cgtggctgcg gctcccgcag cggcgcaata ttatccgtat
      781 tcgcagtacg gctacggtta cggatataac cagcgggcgg tggcaattgc cacgcagcag
      841 tgcaccgccg cggtccagaa tcgcttgtac acccgtaccg gcttgagcgg aatcctcggc
      901 cagctgcttg gcgtctcggg caccagcgct cgtgtcgtca gcatcacccg ggtaactccg
      961 cgccgaagca cgatacgcgt ggacggcctc gcgaccagcg gccggatggc ttacaacccg
     1021 tacggctatg gcgcttatgg tgcgctcggc tacgcgtacc agcctgacct gcggttcaac
     1081 tgcgacgtcg actatcgcgg ctatgtccgc gacgttgaca tcaaccgccg ctaacggccg
     1141 gttcgagtaa agccaatgga ggagcgccgg ttcgccggcg ctcctttttt ctggccttgg
     1201 gtcagcgctc tgcggcccgc cgctcgacgt accacggggt cagcatcgta acgtcgttca
     1261 gcttttcctt cttcggggca agacgagcga ggtcgaactc gcactcgaac tgaaggccgg
     1321 ccttgccgtt gccggcccac ctgacggttc cggtgaccgg gccgactccc acgatgtcga
     1381 tcctcaactc cgttccggga gcaaagggcc ggcggcactc gatcaaggcg ccggtgacgg
     1441 agatgttgcg cagccggatt tcttcttgat agccgtcgat catcgccacg gcccgccgca
     1501 tgagccggtg gcgccgctcg cgaaggcact ggaacccggc agcctccact cgtgcgcggt
     1561 tggcgagctc gcgcgcttcc tttgaagcga ccggctggcc gaagatgaag ccctggacgt
     1621 gactgcagcc gagctcgcgg atgagcgcga gatcgtcatg ggtttcgacg ccctcggcac
     1681 aggattccat ttccaggctt tccgccaggc tgacgatggc gcggatgata gcactgttgc
     1741 ggctgctcgg gttggcggcg ccgcgaacga agctctggtc gatcttgatt ttgtcgaacg
     1801 gcgctttctt caggtagccg agggacgaat agccggtgcc gaaatcgtcg agcgcaagcc
     1861 gcacgccgag cttcttcagc cgggcgaacg tgccttcggt atcgtcgttg tcggccagga
     1921 acacgccttc ggtaatttcg agctcgacct gtcccggctt gattttcgaa tcgtcgatgt
     1981 gccgcgcgat catgtcgacc aggcctgggt cgttgaactg gatcggcgag aggttgatgg
     2041 cgatcctgac atgctccggc caatgcgcgg cctcggcgac agccgtcttt aggacccact
     2101 cgccgatctt gccgatcaaa ccgcattctt cggcgagggg aatgaacttg gccggcgaga
     2161 tcggcccgcg cacggggtgg ttccagcgga cgagcgattc gaagccggag acttcctcgc
     2221 tcgcggcccg gacgattggc tggtaaacga cctcgaactc gccgcgctcg atcgcctgcc
     2281 tcatgtcgct ttcaagcaac tgccgatcgg cggcctcgct gtgcatcgac gcttcgtaga
     2341 agcagtgctg cccgcggccg gcgcccttcg cggcgtaaat cgccaggtcg gcattgcgga
     2401 tgaggctgtc ggcgcaggcg cggccggggt cgccgatcgc gattccgaca gaggctccga
     2461 tcagcactcg atgtccctcg atcacatagg gacgcgaaac atgctcgatc agggtccgcg
     2521 acagcgattc cagaagcccg atgtccacgg ttcccggaag cacggcctcg aattcatcgc
     2581 cgccgagacg accgacctgc ccgtaatcgc caagtaccgc cttcagccgc tctccgacct
     2641 cgcgaagcag ggcatcgcca atcgggtggc cgagcgtgtc gttcacgttc ttgaaacggt
     2701 cgagatcgat caggaagagg ctgcatccct tctggcgatg agcggcgttg cgaagcgcct
     2761 cgtcgagcgt ttggcgcatc atcgcccggt tcgggagccc ggtgagggaa tcgaacttgg
     2821 cgagcctgga gatttcctgt tcgttgcggc gctgctcggt gagatcggtt ccgattccgc
     2881 gaaatccgag aaagcggcca cgctcgtcga acaccgggtt gcccgagagc gaccagtgca
     2941 cgtcctgctc gctgccggcc cggacgatga cgtcggaaaa agggaaacgc gtcgacaggt
     3001 ggaagccgag agtcttgcgt tcctcgattg ctccgtcggt atatgtatcg accgacagca
     3061 agtcggtgaa ctgccggccg aggagctcgg cgggctcgca gcggaaatcg tcggcaagct
     3121 gctgcgaaac gtacgagagc gtgccttcgg cattggtctc ccagaaccag ccgcgcccgc
     3181 tgttctcgaa ttcgtcgacg aaggtgagcg ccttgcgcgc ttccgcgtcg aggttgagcc
     3241 ggcgccggac agcggcgatg ttggttcgag ccgccgcagt gccgtaggcg acgaggaaga
     3301 aggacaggat cgcaaccccg accggaacca tcggcgatgg cgaaaagaag gacgacgatg
     3361 cggtcgcgac gaaggcgctg acgaccgaca atggcggcga ggttatcgcg accagcgcca
     3421 tcatcgcgat cccggctccg atcgaaacgg acacgaccgg gccgggcggc gaaacgttca
     3481 tcaggaccgt cagcccgaac agcgtccaca gcaccccgac accggccagg taaccgcaca
     3541 tcgcccgtga cacggtgtgc ggcgcgatcc ccatccgatg ccgccattgc aggccgaagg
     3601 cggcgaatcc gtcgaggagg aggatcaggc ctagcggcac gagcgggttc gagagcagcg
     3661 gcgctccgag cagggcaggg tgactgacga ggcaggagag acccagcaag aggtgactgg
     3721 gcccaagcag cagggcggta tggtcgaacg ccgccacccg cgactccgag caggattcgt
     3781 cgcccggcgt ctcggctgcc tcgatgtcga accacagcgc cgcgcggacc gaggcgcgct
     3841 ctggagtgtc gatcgattcg cttaccgctt gtgcaaagcg cgaacgctgc atctgctgtc
     3901 cctaacggag gagaatccct ccgcgggcac aagcgttaag cgcgcgcggt aacggcccgg
     3961 cgaacgaaca gggttagcgg cagcttaagc ctgctttgcg ggaaacggcc ggagcaaggt
     4021 cgaatttcct gtccggagtg agatcatcgc gcaagaacgc cagcgtttcc agcgtgatat
     4081 ccaagactct tcaggatcat gctccgcccg cgacgacggc gtcctggggt ggcggctctt
     4141 cgggaatctc gaaattgcgt gcgttgcgca gctcgggaaa ccagcgggcc cagataaggg
     4201 taacggcgat cgccgcgatc ccgccgccca ccgtcgcggc taccgggccg agcagcgcgg
     4261 cggtgaaccc gcttcgagtc tcgccaagct cgttggaagc ggagattgca agcgtcgacg
     4321 cagcgccgac ccggccgcgc atggcgtccg gagtgtgcag ctggatgagc gattgacgaa
     4381 tatagaccga gaacatgtcc gctgcgccga gcaatgtcag cgccgccagc gacagcgggt
     4441 accaagtgga gattccaaag atcgccgttg cggcgccaaa cacgacgaca gccgacaaca
     4501 tcttgacgcc gacgttcgtc ttgatcggac ggaacgagaa gaagattgcg gtgagcgtcg
     4561 cgcctgctgc cggcgctgca cgaagcgggc cgagtccgtc cgccccgacc tgcaagatgt
     4621 cgcgggcata gagcggaagc atcgcggtcg cgccgccgag gagcaccgcg aacaggtcga
     4681 gcgtgactgc gccgaggaca aggcgattgc gccgcacata ggcaagccct tcgatcattc
     4741 gccgaagcgg tcgtccaggc tcgatagccg tgcgccgaac cggaccgatc aggaacaggc
     4801 agaccgccga aaacgcaaac aggacggtgc tgaacgcata ggaatagaat gggacgacat
     4861 cgtagaggat tccgccgatt gcagggccca gaattgcgcc cgattgccag gctgcagagc
     4921 ttaatgcgat cgcctttgga agcagctcgc gcgggaccag attgggcgcg agggcgctga
     4981 gggcgggccc cgcgaacgcg cgcgccacac cgagtaacgc cgcgaccgaa aacaggatcg
     5041 gaaggctgat ccggccgctc caggtggccc acagcagaat ggccgcgcaa agcagctcga
     5101 ggaggatcac cgcgcgagca acgtgtcgcc ggtcaagccg gtctgcagcc cagccgctga
     5161 ccggcgtcag cacgaacagg ggcacaaact ggaccagccc gatcaggccg agctggaatg
     5221 ccgcctcgtc gatctccatt gtctgccggg cgatgtcgta gacctgccag ccgatgacga
     5281 tcaccatcgc catttgcgcg atcgtcgacg tcagccgcgc cagccagaac gctcggaagg
     5341 cggggattcg cagcggttcg ggaagccagc tcacccgcgg tgcactagac gcggccttac
     5401 cgagcagcaa caatgacggg cgttcttcag ggggagggtt tcatgaagct aaggcacctg
     5461 ttgctttcgg ccgcaaccgc cgcattcgtc gcgggctgca gcacgggtcc ggtgcaggag
     5521 gcggcgcttc ccgatcccgt ggcgcccatt gcgcctgtgg ctccggttgc gtcggcaagc
     5581 tggcaggact tctcgaaccg cttcgtcgaa acctatttgc ggctcaaccc gagcttcgcc
     5641 gtctaccagg gccgccacga atatgacggg cagcttcctg actggagccc gacggggctc
     5701 gcggcgcaaa aacaattcct cacctccgcc atcgccgagg cgcaggcgtt cgattccgcg
     5761 gccttctcgg ccgaacaacg gttcgagcgc gattatctgg tcgccgttgc gcgcgggaac
     5821 ctgttctggc tggacgtcgc tgaccagccg cacaccaacc cggcttatta ttcgggcagc
     5881 ctcgacccat cgccttacgt gaccgtgccc tatgcgccgc ccgaggccag gctgaaggcc
     5941 tatactcgat acctgctcaa tgtgccggcg gcgctcgagc agatgaaggc gaacttgcgg
     6001 actccgctgc cgatctcgtt tgtcgattat gggaagaacg cgttcggtgg ctatgccgaa
     6061 tattatctcg gcgacggcct caaggcctgg gagggtatcg ggactgccgc cgaccaggcg
     6121 gcgctgagtg ccgcagccaa ggcagcttcg gaagcgatga agcagaccac ggcctgggtc
     6181 gaggcgcagc ggccgcaggc tgggaccgac ttcgccctcg gcgccgagcg gttcgctcag
     6241 atgcttcgcg ataccgagat ggtcgacacg ccgctaagcg aactggaagc tatcggccgt
     6301 gctgaccttc agtccaacca ggcgctgctg cgcgaggctt gcgggcgcta tgcgccggga
     6361 aagacgatgc cgcagtgcat ggacaagatg aacgcaaaca agcccgaagg cggcgcggtt
     6421 gccggcgccc gcgcccagct tgccggtctc aagcaattcc tgatcgaaaa ggacttggtg
     6481 acgatccccg gaccggaaga agcgaaagtc gaggaagcgc cgccgtataa ccggcagaat
     6541 ttcgcctaca tcaacatccc cgggccgttc gagaagaccc ttccgtcggt ttattatatc
     6601 gcaccgcccg acccgagctg gccgaaatcc gtccaggacg cattcgttgg cggcgaggcg
     6661 gatctcctgt tcacttcgat ccacgaggtg tggccgggcc acttcctcaa tttcctgcat
     6721 tccaatcgtt cgcctttcct cttcgggcgg gttttcgtcg gctatgcatt cgcggaaggg
     6781 tgggcgcatt acacagaaga gatgatgcgc gtcgccggag tcggcggagg aaccgacgag
     6841 gtgttgatcg gccagctgtc gaacgccttg cttcgcgact gccggttcct gtcggcgatc
     6901 gggatgcaca gcggccagat cacccaggag cagagcttcc gcatgttccg cgagcagtgc
     6961 ttccaggatg aaggcaatgc tcgccagcag gcggcacggg gcacctacga ccccgcctac
     7021 ctcaactaca cgctgggcaa gctgatgatt cgcaagctcc gcgatgattg gaccgcaacg
     7081 cgcggcggcc gggcgtcatg gaaggccttc cacgacgagt tcctgagctt cggcggaccc
     7141 ccgatcccgc tggtccgcca gcagatgatg gggggcgagg cgaaagccgt cttttagcgc
     7201 ttttcgttcc ttgtttgttc cggtaagctt atccaatggc gaaggcgaag acccgttaca
     7261 cgtgccaggc ctgcgggtcg gtgacgatgc gctggcaggg gcagtgcccc gactgcgccg
     7321 aatggaacac gctagtccag gaagcggccg aagtgaccag catcttcgcg gccaagcata
     7381 atctccaggg cggcggccgt aagatcgaac tggtgggact ggatgcccca gcccggcttc
     7441 cggaccggat cgtcagcgga gtctccgaat tcgaccgagc gatcggcggc gggatcgttc
     7501 cggggtcggc gatgctggtc ggcggcgacc cggggatcgg gaagtcaacg ctgctccttc
     7561 agatctgcgc gaagctcgcc gcctgcggcc gcagcgtggt ctacgtttcg ggggaggaat
     7621 cggcggagca agtccggctt cgtgcaattc gcctcgggct cgggaagtcg cctgtgcggc
     7681 tggcggctgc aacctccgtc cgcgacgtcc ttaccacgct cggcgagggc gaatcgcccg
     7741 acctcctcgt catcgattca atccagacga tgcattccga cctgatagag ggcgcgcccg
     7801 gcaccgtcag ccaggtgcgc gcctccgctc aggagttggt gcgtttcgcc aaggagcgcg
     7861 ggaccgcggt ggcgctggtt ggccatgtca ccaaggacgg gacgatcgcc ggcccgcgcg
     7921 tgctcgaaca catggtcgac acggtgctga gcttcgaggg cgaacgaagc caccagtacc
     7981 gcatccttcg agcgctcaag aaccgcttcg ggggaaccga cgagatcggc gtcttcgcga
     8041 tggagagcga ggggctgacc gaggtcgcca acccatcggc cctgttcctc acccggcgcg
     8101 gcgaggccgt cagcgggacc agcgttttcc cggcgatcga aggttcgcgg ccggttctcg
     8161 tcgagatcca ggcgctgacc gtgcggctgg ccagcggagc gacaccgagg cgagcggcag
     8221 tcggctggga cagcggccgc ctggcaatga tcctcgcggt gctggaagcg cgctgcgggc
     8281 tcagcttcgg aacgaccgaa gtctatctca acgtcgccgg cggctaccgc ttaagcgacc
     8341 ctgctgccga tctcgcggtc gcggcggcgc tggtttccgc gatgtccgag cgcccaatcc
     8401 cgagcgaagc agtggtgctg ggcgaaatcg ccctctcagg cgaaatccgc ccggtcgccc
     8461 acgcgccgct ccgactcaag gagtccgcaa agctcggatt cgaggcggcg tgggtgccca
     8521 gcgaagtgaa ggcggtcgag ggaattgcgc tcgcgcattt cggaaatctg cgattgctcg
     8581 tggaccaaat cctcggtcgg tgatttaagc agtggcatgg ccgacattca cgcgattatc
     8641 gaaacgatgg agcaccgctg gatgcgggcg tgggttaccc gcgacattcc gacgctgaag
     8701 tccctgactt cccgcaactt tcggatggtg atcggttcca agcctgcggt gatcctcgat
     8761 tacaagagct gggtcgaggc ggcgggcaca cggtaccgct gcaaatccta ccgcttcggc
     8821 gatgtctatg cgcgcaatct cgggccgatg acggtcttcg cgacccaact cgagctcgag
     8881 gcgacgctcg acggcgagga ctggtccggg aacatgtggg tcaccgacct gtggcgaaag
     8941 tcccgtgtgc ggcgcaagtg gcacctggtc gaacgtgtcc tctctcgccc ggatgagcgc
     9001 aaggaagtcc cggcggcggt tcgctcgctg cagctctggc gctaggcggc cgcaccggac
     9061 gcccactctc gcaatgacgc caagacttcg ctagccgcaa gttcgtgacc gcgctcgaca
     9121 tcttcgtcat cctgcttctg gtcggcggcg gcgccgtcgg cttcgtccgc ggcttcgtct
     9181 atgaggtcct gtcgctgctc gcctgggcag ctgcgatcgc catgatcaag ctgttccaca
     9241 cgcagctgtc gagcgggctc gccgagccgg tcggaactcc cgaaggcgct tcggtgctcg
     9301 cgttcgcgct tctgttcgtg ccgaccttca tcatcgtgaa gatgctcgcc cgctccatcg
     9361 gcggaaagac ccgccggtcg ctgctcggac cggtcgaccg ggcgctcggc ggcggcttcg
     9421 gagtggtgaa gggcctgctc gccgcgacct tgttcttcct gttcgcaaat ctggctaccg
     9481 acctgatcta cggaccggag gcggagaggc ccgagtggat gtcgagttcg cgcacatatc
     9541 cgctcctgaa cgccagcggg cgcgcgatcg tcgactgggt cgaaactcgc cgtggccgcg
     9601 gcgag
//
LOCUS       DATAKH010000134         3741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10449,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000134 DATAKH010000000
VERSION     DATAKH010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3741
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10449"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..1018)
                     /locus_tag="VHN55_05450"
     CDS             complement(134..1018)
                     /locus_tag="VHN55_05450"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX2803413.1"
                     /translation="MARKPASTRASDKRTPAGAPPSRQTIDRPWRIWATLVVVFALVV
                     AGLLGFVIVPAGQRENAGLSMGHAMRRAAGLEAGSPAVAQPVSTASAIPVSSVSWDPQ
                     IMRILAAGSSRRGAAVAAESCVACHGEKGISQSLGEGPVFPSLAGQTAHAIYKQLHDF
                     RSGARVNEQMTPLAQSLSEADLAAVAAFYSEASKEYAALGSRAYVGEPHIDRLAREGD
                     SRRRIPACLACHVNGAGGPIETPVITGQRKDYIRQQLDAFATGARKNDVYGRMRDISA
                     KLTPEEREQLARYFEGTI"
     gene            complement(1019..2698)
                     /locus_tag="VHN55_05455"
     CDS             complement(1019..2698)
                     /locus_tag="VHN55_05455"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX2803414.1"
                     /translation="MAEPLPAAPRRRRKAGAAAELQTGRLVAAHMWLAFAAFGIAIIL
                     GVWQMWARSPVEAPYHTAANYFRSVTLHGVSMAYVLTTFFIMGFGYYVAETALKRPLP
                     GLSVAWGAFIVGVAGVAMATLSILSGNASVLYTFYPPMTATPWFYIGLTLTVVASWVW
                     CVLMLVAMRQWKAANRGKPVPLVMYATVANAVMWLWTTVGVAAELLFQVIPSAFGFNS
                     TVDVGLSRTLFSWTLHPIVYFWLFPAYIAFYSMAPRAAGGRLYSDTMGRLAFVLLLLY
                     SLPVGMHHLMMDPEQSNGFKFVQMFLTSLVTIPTLLTIFTITASFEVAGRMRGGRGLF
                     GWVRTLPWDRPMVLATGLAFIMLFFGGGGGLINMSYGMNAMVHNTSWVTAHFHLIFGG
                     TVVIMYFAIAYAIWPSLTGRHFEDLRPLRIQLWMWFVGMMVMTLPWHWTGLWGQWRRV
                     AAFDYTDPLVQPWGPWVLVSLAGGIILALSGILFLYNLALLHRAGTPGAPRTIAYATA
                     IHPPERVPASLNGFGLWNLLVALLMLIAYGYPIAQFFVDPPPQAMIHRLAQ"
     gene            complement(2691..3236)
                     /locus_tag="VHN55_05460"
     CDS             complement(2691..3236)
                     /locus_tag="VHN55_05460"
                     /inference="COORDINATES: protein motif:HMM:NF012344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803415.1"
                     /translation="MALSERAILKSEVRWAIVVGSVVALILGAILFAAIAMHMNPPSN
                     QEYADPKTLHLSPEFTEANLGTTVQPNGQIVARMIATQFEFVPNCILLPADRDVTLRI
                     TSPDVIHGLLITGTNVNTMVVPGYISQVHTRLTKTGDLLMPCHEYCGLGHSQMLATVR
                     VVPPDQFRPDAQGRAACGNRG"
     gene            complement(3236..3430)
                     /locus_tag="VHN55_05465"
     CDS             complement(3236..3430)
                     /locus_tag="VHN55_05465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803416.1"
                     /translation="MVEPSYPADAHDFASDAEELERIDSAATEAPKGAVVVSAIAVAA
                     LLVGWLLLYFWIFIPRGTVG"
     gene            complement(3543..>3741)
                     /locus_tag="VHN55_05470"
     CDS             complement(3543..>3741)
                     /locus_tag="VHN55_05470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEX2803417.1"
                     /translation="GEETFVDLNTEIPVRLMYHTAYLGDDGRIHYAEDAYGWDNDIAT
                     ALGYESKALAKRSARSADVGP"
BASE COUNT          689 a         1172 c         1302 g          578 t
ORIGIN      
        1 actgtccgct ggcggtccga gcagccggca agcaggcgca aaggctgcac cacgcaacaa
       61 tccgtgtcaa ttcaattgcc tatgtaagcg gcgcggtcgt gccgcgcact gctccgaacc
      121 gcccttgctc tcgctagatc gtgccttcga aatagcgggc gagctgttcg cgttcctcgg
      181 gcgtgagctt ggcggagatg tcgcgcatcc ggccgtagac gtcgttcttg cgcgcgccgg
      241 tcgcgaacgc gtcgagctgc tggcggatgt aatccttgcg ctggccggtt atgaccggcg
      301 tctcgatagg gccgccggcg ccgttgacgt ggcaggcgag gcaggcggga atccggcggc
      361 ggctgtcgcc ttcgcgggcg aggcggtcga tgtgcggctc gccgacataa gcgcggcttc
      421 cgagcgctgc atattccttc gacgcctcgc tgtagaaagc ggcgactgcg gcaaggtccg
      481 cctccgacag ggactgggcg agcggagtca tctgctcgtt cacccgagcg cccgagcgaa
      541 aatcgtggag ctgcttgtag attgcgtgag cggtctggcc ggcgaggctg gggaagaccg
      601 ggccttcgcc gagcgactgg gaaatgccct tttcgccgtg gcaggcgacg cagctttcgg
      661 cagccaccgc ggcgcctctg cggctgcttc cggcggccag gatgcgcatg atctgcgggt
      721 cccagctgac gctggaaacg gggattgcgc ttgccgtgct gaccggctgg gcgaccgccg
      781 gcgagcccgc ttcgaggccc gccgcgcggc gcatcgcatg gcccatcgaa aggcccgcat
      841 tttcgcgctg cccggccggt acgatcacga agccgagaag cccggcgacg acaagcgcga
      901 agacgacgac gagcgtcgcc cagatccgcc acggccggtc gatcgtctgg cgcgacggcg
      961 gcgcgcccgc cggggtccgc ttgtcgctgg cgcgggtgga ggccggcttg cgcgccatct
     1021 attgggcaag cctgtggatc atcgcctggg gcggcggatc gacgaagaat tgcgcgatgg
     1081 gatagccgta ggcgatcagc atcaggagag cgaccagcag gttccacagg ccaaagccgt
     1141 tgagcgacgc cggaacgcgc tcgggcgggt ggatcgcggt cgcataagcg atggtccgcg
     1201 gcgccccggg cgttccggcg cggtggagca aggcgaggtt gtagaggaac aggatgccgc
     1261 tgagcgcgag gatgatcccg ccggccagcg agaccaggac ccacggcccc cacggctgga
     1321 ccagcgggtc ggtgtagtcg aaggccgcga ccctgcgcca ctggccccac aggccggtcc
     1381 agtgccaggg aagggtcatc accatcatcc ccacgaacca catccacagc tggatccgaa
     1441 gcggacggag atcctcgaaa tggcggccgg tcaggctcgg ccagatcgca taggcgattg
     1501 cgaaatacat gatgaccacg gtgccgccga agatcaggtg gaaatgcgcg gtgacccagc
     1561 tggtgttgtg gaccatcgcg ttcattccgt agctcatgtt gatgagcccg ccgccgccgc
     1621 cgaagaagag catgatgaag gcgaggccgg tagcgagcac catcggccgg tcccagggca
     1681 gcgttcggac ccagccgaag aggccccgcc cgccgcgcat cctccccgcg acctcgaacg
     1741 aggcggtgat ggtgaagatc gtcagcaagg tcgggatggt gaccagcgag gtcaggaaca
     1801 tctgaacgaa cttgaacccg ttcgactgtt ccgggtccat catcagatgg tgcatgccga
     1861 cggggagcga atagaggagc agcaggacga aggcgaggcg gcccatcgtg tccgaataga
     1921 gccggccgcc ggccgcccgg ggcgccatgc tgtagaaagc gatataggcc gggaacagcc
     1981 agaaatagac gatcgggtga agggtccagg aaaagagcgt ccgggacagg ccgacatcga
     2041 cggtagaatt gaacccgaag gcggacggga tcacctggaa cagcaattcg gcagccactc
     2101 cgacggtggt ccacagccac atcaccgcgt tggcgaccgt cgcgtacatg accagtggaa
     2161 cgggcttgcc gcgattggcc gccttccact ggcgcatggc gacgagcatc agtacgcacc
     2221 acacccacga ggcgacgacg gtcagggtca ggccgatgta gaaccacggg gttgccgtca
     2281 tcggcgggta gaaagtgtag aggaccgagg cgttgccgct gaggatcgac agagtcgcca
     2341 tcgcgacccc ggcgaccccg acgatgaagg cgccccacgc gaccgagagg ccgggaagcg
     2401 gccgcttcaa agcggtctcg gcgacataat agccgaaccc catgatgaag aaggtcgtca
     2461 gcacataggc catcgacacg ccgtgcaagg tcaccgaccg gaagtagttg gccgcggtgt
     2521 ggtagggagc ctcgaccggg cttcgcgccc acatctgcca gaccccgagg atgatcgcga
     2581 tcccgaacgc ggcgaaagcg agccacatgt gcgcggcgac cagccggccg gtctgaagct
     2641 cggccgcggc ccccgccttg cggcgcctgc gcggagcggc cggaaggggc tcagccacgg
     2701 ttgccacaag ccgcccttcc ctgtgcgtcg ggccggaact ggtccggcgg cacgacccta
     2761 accgtcgcca gcatctggct atgcccgaga ccgcaatatt cgtgacacgg catcaatagg
     2821 tcgccggtct tcgtcagccg cgtgtgcacc tgcgagatgt agccgggaac caccatcgtg
     2881 ttgacgttgg tgccggtgat caggaggccg tgaatgacgt ccggcgaggt gatccgcaaa
     2941 gtgacgtcgc gatcggccgg aagcaggatg cagttcggca cgaactcgaa ctgggtagcg
     3001 atcatccggg cgacgatctg gccgtttggc tggacggtcg tgcccaggtt cgcctcggtg
     3061 aactccggcg agaggtgaag ggtcttgggg tccgcatatt cctggttgct gggcgggttc
     3121 atgtgcatcg caatggccgc gaacaggatc gcgcccagga tcagcgcgac gaccgacccg
     3181 acgacgatgg cccagcggac ctcggatttg agtatcgcgc gctcgctgag ggccatcagc
     3241 cgacggtccc gcgcggaatg aagatccaga aatacagcag cagccagccg acgaggaggg
     3301 cagcgactgc gatcgcggaa acgaccaccg cgcctttggg cgcctccgtt gcggcggaat
     3361 ctatccgctc cagctcttcg gcgtcgctcg caaaatcgtg agcgtccgcc ggataggacg
     3421 gttcaaccaa gcgcaccccc tgttggcgcg aatgagcgct tgattaagca gcggccggcg
     3481 cgccgcgtca atggtcggga aattacctat tgccaaggcg cgcccgtgcc gcggagcgcc
     3541 cgttacggcc cgacgtcggc gcttcgggca ctcctctttg cgagcgcctt gctttcgtat
     3601 ccgagcgctg tggcgatgtc gttgtcccag ccgtaggcgt cctcggcata atggatccgg
     3661 ccgtcgtcgc cgaggtatgc ggtgtggtac atcagccgta ccgggatttc ggtgttgagg
     3721 tcgacgaagg tctcttcgcc g
//
LOCUS       DATAKH010000135         7796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_18132,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000135 DATAKH010000000
VERSION     DATAKH010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7796
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18132"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..830)
                     /locus_tag="VHN55_05475"
     CDS             complement(69..830)
                     /locus_tag="VHN55_05475"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX2803418.1"
                     /translation="MSATDRFETFAALHQPGRPVVLYNVWDPGSARAVAAAGAKAIAT
                     GSHPVGDACGFGDGQKVPLDFVLDNARRVAGAVDLPVTIDFERAYAIEPEAAAANVAR
                     LKATGAVGCNFEDQVIGGEGVHPLDRQCRCIGAMREEVGPHFFINARTDLFLKTESRD
                     DSLVGDVIERGKAFADWGASGFFVPRMADPRHIERVVREVPLPLNLIAFPGAPSNRDW
                     ASAGVARISYGPFPYKALMKLLEDAAREAITSVNG"
     gene            complement(827..1204)
                     /locus_tag="VHN55_05480"
     CDS             complement(827..1204)
                     /locus_tag="VHN55_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010234166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2803419.1"
                     /translation="MARITGLGGVFYKVADPAASTAWYKEMLGVGGEWGAMFPFKDDD
                     PEGFSLFSQFKADSGYFGPSTKDFMVNFRVDDLDGMIAGLEANGVEILGRQDEDYGRF
                     AWIMDPDGVKIELWQQLGEAPAA"
     gene            complement(1230..2954)
                     /locus_tag="VHN55_05485"
     CDS             complement(1230..2954)
                     /locus_tag="VHN55_05485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013832949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803420.1"
                     /translation="MTSLRWITAASLLALSACATVPPAAEQPPLLPADHNGPPMKPPP
                     FPVEPVEHETNGLAKLAPVQMTADTGYLTAEERQVVNLLNQAANLMSEIYLRQAFAQN
                     PEVRAQIAFVTPPHREARLLEKFDAFFGPWDPLDDDKPFFGNTPRPEGAGFYPTDLTK
                     EAFDAYLAAHPDQSEALTSPYTVVRRQGDGLVAIPYSVEYRQWLEPAARLLEQAAAIT
                     TNPSLKRFLSLRAKAFLTDDYYESELAWMDLKDTPIEVAIGPYETYTDELYGRKTAFE
                     AFVTLRNPTESAKLDKYKSLLRDMEANLPVEEKYKNFQRGFESPISVVDQVHGGGDNV
                     PGVQTIAFNLPNDERVREAKGAKKVILQNVLGAKYERILKPMAALVLVPEQAANVTRA
                     YMANETLFHELSHSLGPGSIVVNGRKTTVDKELKDVGSGFEEAKADVMGAWNIMYMMD
                     RGVLPKAERAQIEATYVAGLFRAMRFGTGEAHGRGAAMQYQYLRNHGGITWDSAAGRF
                     RIVPDKLDSGIRKLVADIVRLQGNGDYEGTKAFLNKWAVIDAEAQSVIDSMGHIPVDI
                     RPIYPDRI"
     gene            complement(3215..4024)
                     /locus_tag="VHN55_05490"
     CDS             complement(3215..4024)
                     /locus_tag="VHN55_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEX2803421.1"
                     /translation="MSIRTILVDDEPLATQGLQLRLEAHDDVEVVATASNGREAIRQI
                     KTHKPDLVFLDIQMPGFDGFSVVQGLLEVEPPLFVFVTAYSDHAVRAFEAQAVDYLVK
                     PVDEDRLAATLDRVRQRLSERRSAEEAERLKEALVEHAPEAAEELELAEGGSEGPAAN
                     RFERMINIKDQGQIFRVDVDTIERIDAAGDYMCIQTGDNTLILRETMKDLEKRLDPRR
                     FQRVHRSTIVNLDLVRQVKPHTNGECFLVLDSGAQVKVSRSYRDVVARFVH"
     gene            complement(4021..5226)
                     /locus_tag="VHN55_05495"
     CDS             complement(4021..5226)
                     /locus_tag="VHN55_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013934658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX2803422.1"
                     /translation="MATDSATLVQKDSAQDSPARQEGRRGRAETPRIDSPARPILQGV
                     GLDAPFFEDKNRAFWFLQSLGWTGYFLLRSLSGFANSMAPMWVVHTALLTATGYSLTL
                     LMGALFRRLIKMRVVWTAVLSLAAVVIASMAFSVIETWSYATFLKPESRPAGFEYMGA
                     ILLNFALLAAWAALYYGINYYILLEEQITQRERLESQASSAQLAMLRYQLNPHFLFNT
                     LNSISTLVLLKQTERANAMLARLSSFLRYTLANESTAKVTLAQEVETLKLYLEIEKMR
                     FEDRMRPHFRIDADTIGAKLPSLLLQPLIENAIKYAVTPSEDGADIWLTASREGDGVR
                     IEVADNGNCNGCAESAANPSTGVGLANIRERLAQAYSSAHGFTTKKNEHGGFSVIIEI
                     PYESGDEGS"
     gene            5330..7285
                     /locus_tag="VHN55_05500"
     CDS             5330..7285
                     /locus_tag="VHN55_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006833211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEX2803423.1"
                     /translation="MERSLKLKLSRLAAAAAALLIASCQSEQARNATDPTPVDTRAEV
                     APILTTADAKDVHSYARPLEARVTHVALDLDLSFDTKRIGGRATLDIERKPDAKEIVL
                     DDDNLEIRSISDGSGRPLDYKVGASHPNLGAPLAIALRPDTKRIVIDYRSAPEASALL
                     WLTPEQTAGKTHPFMFSQGQAISNRSWIPTQDSPGIRQTWEAWVSVPSKLTAVMSAEK
                     GDSADPTPPPPDRHSFYYHMDRPVAPYLIAIAAGELAFEPLGKRTGVWSEPATIKAAA
                     AELSDTEQMVDVAESLYGPYRWGRYDMIVLPPSFPYGGMENPNLTFLTPTFIAGDKSL
                     VSLIAHELAHSWSGNLATNATWNDFWINEGFTTYAERRIIEKLYGKKQADQQVLLGLD
                     ALETAVAENGGPKGADTRLHLEVGRDRHPDDVGSDIAYEKGAAFLRTIEAIVGRERFD
                     AWMKGWFERHAFEPVTSAIFLDDIRRNLVNGDEELERKLMLEEWVHGTGIPSNIVRPD
                     PAAFAEVDKAVAAFKAGAEPDPAAWSKWNTDERLRFLTHIDRKQPTGRMARLDSTFGL
                     SGSRNNEIRFAWLELAVANRYQPATASLKQFLSSQGRGKFVRPLFQALAADPQWGRKI
                     AADLYPQVRSLYHPMVTRELDKLALGG"
     gene            7362..>7796
                     /locus_tag="VHN55_05505"
     CDS             7362..>7796
                     /locus_tag="VHN55_05505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803424.1"
                     /translation="MYEAPDRYRRMTSARLPGGESLTFASGEAELENSPLRDAQLLAR
                     AHLAPFFAAANIVAAAMMVAALWAEVSILWLGGWAAAVAVANLLAMQMARTQAITHIG
                     RSGQRLSDRAMVADIGLRAALWLSLPLYLFPSLAPGAQLIAAS"
BASE COUNT         1328 a         2627 c         2468 g         1373 t
ORIGIN      
        1 gctgctgcgt ccatgcacgg tagaacacgc cctgcacctg tccggtcact cggattcggc
       61 gcgcaacgtc aaccattgac cgacgtaatc gcctcccgcg cagcgtcctc gagcagcttc
      121 atcagcgcct tgtacgggaa cggcccgtag ctgatcctcg cgacgcccgc gctggcccaa
      181 tcgcgattgg acggcgcgcc ggggaaagcg atcaggttga gcggcagcgg cacttcgcgg
      241 acgacccgct ctatgtgcct ggggtcggcc atccgcggca cgaagaagcc gctcgctccc
      301 caatccgcga acgccttgcc gcgctcgatc acatcgccga ccagcgaatc gtcgcggctc
      361 tctgtcttca ggaaaaggtc ggtgcgggca ttgatgaaga agtgcggccc gacctcctcc
      421 cgcattgccc cgatgcagcg gcactggcgg tcgagcggat gcaccccttc gccgccgatc
      481 acctgatcct cgaagttgca gccgacggcg ccggtggctt tcagccgagc gacatttgcg
      541 gcggctgcct ccggctctat cgcataggct ctctcgaagt cgatcgtgac aggcagatcc
      601 actgccccgg cgacccgcct tgcgttgtcg agaacgaagt cgagcggcac cttttggccg
      661 tcgccgaagc cgcaggcgtc gccgactggg tggcttcccg tcgcgatcgc cttggcgccg
      721 gccgccgcca ccgcccgggc gctgcccgga tcccagacgt tatacaggac gaccggccgt
      781 cccggctggt ggagcgccgc gaaggtttcg aagcgatcgg tagcgctcat gccgccggag
      841 cctcgccgag ctgctgccac agctcaattt tcaccccgtc ggggtccatg atccaggcga
      901 agcggccgta atcctcatcc tgccgcccga ggatttcgac gccattcgct tccaggccgg
      961 cgatcatccc gtcgaggtcg tcgactcgaa aattcaccat gaagtccttg gtgctcggcc
     1021 cgaaatagcc gctatcggcc ttgaactgcg aaaacaggct gaagccttcc ggatcgtcgt
     1081 ccttaaacgg gaacatcgcg ccccattcgc cgccgacgcc cagcatctcc ttgtaccaag
     1141 cggtgctcgc ggcgggatcg gcgaccttgt agaagacgcc gccaagtccg gtaatcctgg
     1201 ccatcggacc gctcctttta aagttggtct cagatccggt ccgggtagat cggccggata
     1261 tcgactggga tgtggcccat cgaatcgatc accgactgcg cttccgcatc gatcaccgcc
     1321 cacttgttca ggaacgcttt ggtgccctcg taatcgccgt tgccctgcag cctgacgatg
     1381 tcggcgacga gcttgcggat gcccgaatcg agcttgtcgg ggacgatccg gaatcgcccg
     1441 gcagcggaat cccaggtgat tccgccatgg ttgcgcaaat actgatattg catcgcggcg
     1501 ccgcggccgt gcgcttcgcc ggtgccgaac cgcatcgccc ggaacaggcc ggcgacataa
     1561 gtcgcttcga tctgcgcgcg ctcggccttg ggaagcaccc cccggtccat catgtacatg
     1621 atgttccagg cgcccatcac gtcggccttg gcctcctcga aaccgctgcc gacgtccttc
     1681 aactccttgt cgaccgtggt cttgcggcca ttgacgacga tcgaaccggg cccaaggctg
     1741 tgcgacagct cgtggaacag ggtctcgttg gccatgtagg cgcgggtcac gttcgcggcc
     1801 tgctcgggga ccagcacgag cgccgccatg ggtttcagga tgcgctcgta cttggcgccc
     1861 agcacgttct ggaggatcac cttcttggcg cccttcgcct cccgcacccg ctcgtcgttg
     1921 ggcaggttga acgcgatcgt ctggactccg ggcacgttgt cgccgccgcc atggacctgg
     1981 tcgacgaccg agatcggcga ttcgaagccg cgctggaagt tcttgtactt ctcctcgacc
     2041 ggaaggttgg cctccatgtc gcgaagcagc gacttgtact tgtcgagctt ggccgactcg
     2101 gtcggattgc gcagggtgac gaacgcctcg aacgcagtct tccggccgta cagctcgtcg
     2161 gtgtaggtct cgtaggggcc gatcgcgact tcgatcggcg tatccttcag gtccatccaa
     2221 gccagctcgg actcgtaata atcgtcggtc aggaaggcct tcgctcgaag cgacaggaac
     2281 cgcttcaggc ttggattggt cgtgatcgcc gccgcctgtt cgagaagcct cgccgccggc
     2341 tcgagccact gcctgtattc gaccgaataa gggatcgcga ccagcccgtc gccctgccgc
     2401 cgcaccacgg tgtaggggct ggtcagcgcc tccgactggt cggggtgcgc ggcgaggtag
     2461 gcgtcgaacg cttccttggt gagatcggtc gggtagaagc cggcaccctc gggccggggc
     2521 gtgttgccga agaagggctt gtcgtcgtcg agcgggtccc agggaccgaa gaaggcgtcg
     2581 aatttctcaa gcaaccgcgc ttcccggtgc ggcggggtca cgaaagcgat ctgtgcccgc
     2641 acctcgggat tctgcgcgaa tgcctggcga aggtatattt cgctcatcag gttggcggcc
     2701 tggttgagca ggttcaccac ctgccgctcc tcggccgtca gatagccggt gtcggcggtc
     2761 atctgcaccg gggcgagctt ggccaggccg ttcgtctcgt gctccaccgg ctcgaccggg
     2821 aacggcggcg gcttcatcgg cggcccgttg tggtcggcgg gcagcagcgg cggctgctcg
     2881 gcggcgggag gaacggtggc gcaggcggac agtgcgagca gcgatgcggc cgtgatccag
     2941 cggaggcttg tcatgcgccg ccgattagca gcggctcggc accctgtgca aacgtcagcc
     3001 cagctcggca gtgaccggcg cgctgaatcc cggagcgggc gccgccttgg gcggcggcag
     3061 cttaacggtg acgctggagg ttccttggtt tggcgaaccg ccttcgcagg cggggagaag
     3121 caataggaaa agcggagcga gtcgcaccat cgcgccagcc tcccccgcca aggtttagaa
     3181 attgccaacg gcggagcggc cgcagcctcg aaggctagtg gacgaacctc gcaacgacgt
     3241 cgcgatagct ccggctcacc ttcacctggg cgcccgaatc cagaaccagg aaacattcgc
     3301 cgttggtgtg cggcttcacc tgccggacga ggtcgaggtt aacgatcgtc gagcggtgga
     3361 cacgctggaa ccgccgcggg tcgagcctct tttcgaggtc cttcatcgtc tcgcggagga
     3421 tcaaggtatt gtcgcccgtc tggatgcaca tgtaatcgcc ggcggcgtcg atccgctcga
     3481 tggtgtcgac gtcgacccgg aaaatctgcc cctggtcctt gatgttgatc atccgctcga
     3541 agcggttggc ggcggggccc tcgcttccgc cttcggccag ttccagctcc tcggctgcct
     3601 ccggagcatg ttcgaccagc gcctccttga gccgttccgc ctcttcggcg cttcgccgct
     3661 ccgacaggcg ctgccgaacg cggtcgaggg tcgccgcgag ccggtcctcg tcgaccggct
     3721 tcaccagata atccaccgcc tgcgcctcga acgcccggac cgcatggtcg ctgtaggcgg
     3781 tcacgaacac gaacaatggc ggctccacct ccagcagccc ctgaacgacg gagaatccgt
     3841 cgaagccggg catctggatg tcgaggaaga cgaggtcggg cttgtgggtc ttgatctgcc
     3901 ggatcgcctc gcgcccgttc gacgccgttg ccacgacctc gacgtcgtca tgggcctcga
     3961 gccggagctg aagcccctgg gtcgccagtg gctcgtcgtc gaccaggatg gtccggatgc
     4021 tcatgaacct tcgtctccgc tttcgtaggg aatttcgatg ataacgctga aacccccgtg
     4081 ttcgttcttc ttcgtcgtga aaccgtgcgc gctgctatag gcttgcgcca ggcgttcgcg
     4141 gatgttggct agccccactc cggtcgacgg atttgccgcc gattccgcgc agccgttgca
     4201 attgccgttg tccgcaacct cgatccggac cccgtcgccc tcgcggctgg cggtcagcca
     4261 gatgtcggcc ccgtcctcgc ttggagtgac cgcatatttg atcgcattct ctatcagcgg
     4321 ctggaggaga agcgacggca gcttggcccc gatggtgtcc gcatcgatcc ggaagtgcgg
     4381 ccgcatgcgg tcctcgaaac gcatcttctc gatctcgaga tagagcttca acgtttccac
     4441 ctcctgggcg agcgtgacct tggccgtcga ttcgttcgcg agcgtgtagc ggaggaatga
     4501 ggacaatcgc gcgagcatcg cgttggcgcg ctcggtctgc ttcaggagca cgagcgtcga
     4561 aatcgagttc agcgtgttga acaggaagtg cgggttgagc tggtagcgaa gcatcgccag
     4621 ctgcgccgag ctcgcctggc tctcgagcct ctcgcgctgg gtgatctgct cctcgagcag
     4681 gatgtagtaa ttgatcccgt aatagagcgc cgcccacgcc gccagaagcg cgaagttcag
     4741 aaggatcgcg cccatatatt cgaagcccgc agggcgcgat tcgggcttca ggaaagtcgc
     4801 gtagctccag gtttcgatga ccgaaaaggc catcgaagca atcaccaccg cggcgagcga
     4861 caggaccgcc gtccacacca cccgcatctt gatcagccgc cggaacagcg cgcccatcag
     4921 cagggtcagc gaatagccgg tagcggtcaa aagcgccgtg tggacgaccc acatcggcgc
     4981 catggaattg gcgaatccag acaaggaccg gagcaggaaa tatcccgtcc agccgaggct
     5041 ctgaaggaac cagaaggccc ggttcttgtc ctcgaagaag ggcgcatcga gcccaacgcc
     5101 ctggaggatg ggccgggccg gggaatcgat ccgcggagtc tcggcgcgac cgcgccggcc
     5161 ctcttgccga gccggcgaat cctgcgccga gtctttttgg accagggttg cgctgtcggt
     5221 cgccatcggc gttgatatag ggcgattgtc attgcgttgc gagcagctct ggacagccca
     5281 ccgccaagcc tgctttcggc acccggggcg gcggtctgcg ttgccgcaag tggagaggag
     5341 cctgaagttg aagctttcga gactggccgc agcggccgcc gcactgttga ttgcctcgtg
     5401 ccagtcggag caggcccgca atgcgaccga ccccactccg gtcgatacgc gagctgaggt
     5461 cgccccgatc ctgacgaccg cggacgcgaa ggacgtccac agctacgcgc ggccgctcga
     5521 agcccgggtc acccacgtgg cgctggacct cgacctcagc ttcgacacca agcgtatcgg
     5581 cggcagggcg accctcgaca tcgaacggaa gcccgacgcg aaggagatcg tcctcgacga
     5641 cgacaatctc gagatccgct caatctccga cggcagcggc cgcccgctcg actataaggt
     5701 cggtgccagc cacccgaacc tgggggcgcc gctggctatt gcgcttcgcc ccgacaccaa
     5761 gcggatcgtc atcgactatc gctccgcgcc cgaagccagc gcgctgcttt ggctcacgcc
     5821 cgagcagact gccggcaaga cccatccctt catgttcagc cagggccagg cgatctccaa
     5881 ccgcagctgg attccgaccc aggattcgcc ggggatccgg cagacttggg aggcatgggt
     5941 ctcggtgccg tccaagctga ccgccgtgat gagcgccgag aagggcgaca gtgccgaccc
     6001 cactccgccg ccgcccgacc ggcacagttt ctattaccac atggaccggc cggtcgcgcc
     6061 gtacctgatc gcgatcgccg ccggggagct ggccttcgag cccctgggca agcgcaccgg
     6121 cgtgtggtcc gagccggcaa cgatcaaggc ggcagccgcc gagctttccg acacggagca
     6181 gatggtcgac gtcgccgaga gcctctacgg gccctaccgc tggggccgct acgacatgat
     6241 cgtgctcccg ccctccttcc cctacggcgg gatggagaat ccgaacctca cattcctgac
     6301 cccgacattc atcgccggcg acaagagcct ggtcagcctc atcgcgcacg agctcgcgca
     6361 tagctggtcc ggcaatctcg ccaccaacgc gacatggaac gatttctgga tcaacgaggg
     6421 cttcaccacc tatgccgagc ggcggatcat cgaaaagctc tacggcaaga aacaggccga
     6481 ccagcaggtc ctcctcgggc tcgatgcgct cgaaaccgcg gtcgccgaga acggtgggcc
     6541 gaagggagcc gacacccgtc tccacctcga ggtcggccgc gatcgccatc ccgacgacgt
     6601 cggcagcgac atcgcctacg agaagggcgc agccttcctt cggacgatcg aggcaatcgt
     6661 cggccgcgaa cggttcgacg catggatgaa gggctggttc gagcggcacg ccttcgagcc
     6721 ggtcacctcg gccatcttcc tcgacgacat ccgccgcaac ctggtcaacg gcgacgagga
     6781 gctcgagcgc aagctgatgc tggaggaatg ggtccacggc accggaatcc cgtcgaacat
     6841 cgtccgcccc gacccggccg cattcgcgga agtcgacaag gcggtcgccg cgttcaaggc
     6901 gggcgccgag cccgatcccg cggcctggtc gaagtggaat accgacgagc gtctccgctt
     6961 cctcacccat atcgaccgca agcagccgac cgggcgaatg gccaggctgg acagcacatt
     7021 cggcctttcc ggcagccgca acaatgagat ccgcttcgcc tggctcgagc tcgcggtcgc
     7081 aaaccgctac cagccggcaa cggcctcgct gaagcagttc ctgtcttcgc aggggcgtgg
     7141 caagtttgtc aggccgctgt tccaggcgct cgcagccgac ccgcaatggg gccgaaagat
     7201 cgccgccgac ctctatccgc aagtccgctc actctatcac ccgatggtga ctcgcgaact
     7261 cgacaagctt gcgctcgggg gctgacgaaa ccgaatccga tcttaaccgc gtttcaaccg
     7321 tcttggcggt atcggccgcg agagcagtaa gcggaacgcg gatgtacgaa gcgcctgacc
     7381 ggtaccgacg gatgacctcg gcgcgcttgc cgggcgggga atcgctgacc ttcgcgtccg
     7441 gcgaggccga gttggagaat tcgccgcttc gcgacgccca gctcctcgcc cgggcccatc
     7501 tcgcgccctt ctttgcagcg gccaacatcg tcgccgccgc gatgatggtc gcggcgctgt
     7561 gggccgaagt gtcgatcctg tggctcggtg gctgggcggc agcggtcgcc gtcgccaacc
     7621 tgctcgcgat gcaaatggcc cggacccagg cgatcaccca tatcgggcgc tcgggccagc
     7681 ggctttccga ccgcgcaatg gtcgccgaca tcggcttgcg ggcggccctg tggctctcgc
     7741 tgccgctcta cctgttcccc tcgctcgctc cgggcgccca gttgattgcc gcttcg
//
LOCUS       DATAKH010000136         4435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10493,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000136 DATAKH010000000
VERSION     DATAKH010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4435
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10493"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..604)
                     /locus_tag="VHN55_05510"
     CDS             complement(239..604)
                     /locus_tag="VHN55_05510"
                     /inference="COORDINATES: protein motif:HMM:NF020413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1810 family protein"
                     /protein_id="HEX2803425.1"
                     /translation="MASSDDLFNLQRFVDAQAAGVYEQALSEIRAGEKRSHWMWFIFP
                     QHRDLGRSAMAKFYGLSGEEEAQAYLAHPVLGPRYRECVAAVRAWVEKGRSLDAIFGE
                     LDAMKFRSSVDILGFSSWR"
     gene            788..1246
                     /locus_tag="VHN55_05515"
     CDS             788..1246
                     /locus_tag="VHN55_05515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803426.1"
                     /translation="MKTLILVAGAAALAVTTPALANPGKGQGNKGNPHAQKSQAKAHG
                     QGKHGKNAVKSRYGKRHYALDARGSCPPGLAKKNNGCMPPGQAKKAYNVGQRYNRNFG
                     YRWTYNQIPTDLRARYSFDRDDRYYYRNGYLYQVDPRTMLIERAVSALLR"
     gene            1355..1795
                     /locus_tag="VHN55_05520"
     CDS             1355..1795
                     /locus_tag="VHN55_05520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX2803427.1"
                     /translation="MSQPQTAGPVPSHRRDGWTPARQLRFLDMLARTRSVTRAAAAAG
                     MSRESAYRLRKRDSGGLVAAAWDRILATPAPRPAKGHRRGKPSAWRQAVKDAGFAAFS
                     TKGHNVDEPLFSPLRSEGRDLKPPLASRPCGHSRQLRRLCCVSS"
     gene            complement(1822..2142)
                     /locus_tag="VHN55_05525"
     CDS             complement(1822..2142)
                     /locus_tag="VHN55_05525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803428.1"
                     /translation="MATRRSQIEEVRAIRSSRDRVARLLSRYPDVSDQHRREILDFLK
                     EGRHIDIGLLTANDNVRPRLDAFMADHRRHFQIDLFDMVKAVAVIAAAMLVLALLWEI
                     VRPV"
     gene            complement(2189..2410)
                     /locus_tag="VHN55_05530"
     CDS             complement(2189..2410)
                     /locus_tag="VHN55_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803429.1"
                     /translation="MIHQRFAVEFDRRTVGIAVRLPGGFVFYSSDPRFEHLEGRTFRR
                     ARAIERAIEKADRRHRERRAAAAGLAFAG"
     gene            complement(2718..3470)
                     /locus_tag="VHN55_05535"
     CDS             complement(2718..3470)
                     /locus_tag="VHN55_05535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004212189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2803430.1"
                     /translation="MTKEFENKVAMVTGAGSGIGAAIAKRFAEDGAKVIVGDIDEEAA
                     RRIASEIEAGGGTAAAVRQDVGDSASVEKSVEFAVQKFGRLDVAVNNAGITGDLAPTA
                     DYSLKGWDKVIAVNLSSVFYGMKYQIPAMLRSGGGSIVNIASILGSVGSANSAGYNAA
                     KHGVVGLTKTAALEYAKDGVRVNSIGPGYIDTPLLQALDKDTYNGLVGLHPIGRLGRA
                     DEVAELALFLASDKASFVTGSYHLVDGGYTAQ"
     gene            complement(3554..3694)
                     /locus_tag="VHN55_05540"
     CDS             complement(3554..3694)
                     /locus_tag="VHN55_05540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803431.1"
                     /translation="MQRQSEAGDQACAERREALLDDALDDTFPASDPPAITMPGRTDR
                     PC"
     gene            3967..>4435
                     /locus_tag="VHN55_05545"
     CDS             3967..>4435
                     /locus_tag="VHN55_05545"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEX2803432.1"
                     /translation="MTAAPKLDRIDRKILAALQEDARLTNQALSERVALSPSACLARV
                     RRLEREGVIQGYHARLDPFTLDIGLVLYADITLDGHTPAELARFEEAIAALPQVVEAS
                     HVTGSFDYILKVVVADMREWTQIAERLSSGDLGADRINTHVVMRKPKFFVGYPV"
BASE COUNT          770 a         1496 c         1376 g          793 t
ORIGIN      
        1 ataccaatta ggcaagtgcc ggcgcggggc gggccgcgcc gtcagttggg tcgcgcttcg
       61 gttgcccgct gtccctctcg agccgtttct cggcagaagc acaagattgc tgtgcaatca
      121 cttcgcttct gctcggcggc gctctctttc caccacatag ctcccctcgg ccagcggctt
      181 cagaagcgcc ttctgcgggc ggctgagcgt cagccacgcc ttcgcgtcct cggggcgatc
      241 accgccagct actaaacccc aaaatatcga ctgaagacct gaacttcatc gcgtccagct
      301 cgccgaagat cgcatccaga ctccggccct tctccaccca cgcccgcacc gccgcgacgc
      361 actcccggta ccgaggcccg agcaccggat gcgcaagata ggcctgcgcc tcctcctcgc
      421 ctgacaggcc atagaacttc gccatcgcgc tccgcccgag gtcgcggtgc tggggaaaga
      481 tgaaccacat ccagtggctg cgcttctcgc cggccctgat ctcgctaagc gcctgctcgt
      541 acacgcccgc cgcctgcgca tcgacgaagc gctgcaggtt gaaaagatcg tcgctgctcg
      601 ccatcgcgct ggccgctcta caacactttc gccgcagcgc ggcgctgtgc gccccaagag
      661 tcttcttgcg ggcggatgaa cgccgcaact ccggcgattc cggctcgtta cagctaacaa
      721 cacccgcagg tttactgtcg ctctgcagcc cgcgcactac ccctcgagcg acgtcaggaa
      781 catcatcatg aagacgctaa ttctcgttgc cggcgccgct gcgctggctg tcaccactcc
      841 cgcgctcgcg aaccccggca agggccaggg gaacaagggc aatccgcatg cccagaagtc
      901 gcaggccaag gcgcatggac agggcaagca cggcaagaac gccgtcaaga gccgttatgg
      961 caagcggcac tatgcgctcg acgcccgtgg aagctgccct ccgggcctcg ccaagaagaa
     1021 caacggttgc atgccgccgg gccaggccaa gaaggcctac aatgtcgggc aacgctataa
     1081 ccgcaatttc ggctaccgct ggacctacaa ccagatcccg actgatttgc gcgcgcgcta
     1141 cagcttcgac cgcgatgacc gttactatta ccgcaacggc tatctctacc aggtagaccc
     1201 gcgcaccatg ctgatcgagc gggcagtcag cgcgctcctg cgttaatatt gattggaacc
     1261 cggcgggccc gctttcctct cgggaagcgg gtcgccttcc gcccgaaaag aaaatcctgt
     1321 cctacagggg cccctttgtg atctaggctt gtcgatgagc cagccacaga cagccggacc
     1381 ggtcccgtcg caccgccgcg acggctggac cccagcccgt cagctccgct tcctcgacat
     1441 gctcgcccgc acccgctccg tcacccgcgc cgcggccgcc gcgggcatga gccgggagag
     1501 cgcctaccgg cttcgcaagc gcgattcggg cggcctcgtc gccgccgcct gggaccgcat
     1561 cctggccacg ccggccccgc gcccggccaa aggtcacagg cgcggcaagc ccagtgcgtg
     1621 gaggcaggcg gtcaaagacg ctggattcgc ggccttttcg acaaaaggtc acaatgtgga
     1681 cgaacccctg ttttcacccc tccgcagcga aggccgtgac cttaagccgc cgctcgcatc
     1741 gcgtccttgc gggcactcgc gtcagcttcg ccgcctttgc tgcgtgtcga gctgaagcaa
     1801 ccgtccacaa gcgcgcgtcc gtcataccgg ccgcacgatc tcccagagca gcgcgagcac
     1861 gagcatcgcc gcggcgataa cggccactgc cttgaccatg tcgaacaggt cgatctggaa
     1921 gtgacggcgg tggtcggcca tgaacgcatc gagccggggc cgcacattgt cgttggcggt
     1981 cagaaggccg atgtcgatgt gccggccctc cttcaggaaa tcgaggattt ccctgcgatg
     2041 ctggtccgag acgtcgggat agcggctgag caggcgcgcc actcggtcgc gcgacgagcg
     2101 gatcgcgcgg acttcttcaa tctgtgacct tcgggtagcc atgataaatc tccggtgttt
     2161 ttgggaaggg aggaaatcgg atcggcggct agccggcgaa cgccagcccg gccgccgccg
     2221 cccggcgttc gcggtggcgc ctgtccgcct tttcaatcgc gcgttcgatc gctcgcgcgc
     2281 ggcggaacgt gcgtccctcc agatgttcga accgggggtc ggaggaatag aaaacgaagc
     2341 cgccgggcag cctgaccgcg attccgaccg tgcgccggtc gaactcgact gcaaaacgtt
     2401 gatggatcac ctgagctctt ctccatgcgg ccttatcagc gcgcgcgtgg agcgcccgcc
     2461 gattgccgcc gttgaatgaa ggggaggcgc atgtaccgat gcgccggcct gggagaggcc
     2521 ctaagcgcgc cgccgtgcac gaggccgcgg ggcgcccagg gcgctagagc cgtgcggtgc
     2581 tgctgccggg atggagcagg gaccggtcga aggtggaatg atcggtcatg ttagtatcga
     2641 tatggctcgc tgaacttctt tatcaagggc ggggcgggaa agcctcagga cttcccacgc
     2701 ccctgcagat gaggcgctta ttgcgcggtg tagccgccgt cgaccaggtg gtagctgccg
     2761 gtcacgaacg acgccttgtc ggacgccagg aacagcgcca actccgcaac ctcgtcggcg
     2821 cggccgaggc ggccgatcgg atgcaggccg accaggccgt tataggtatc cttgtcgagc
     2881 gcttgcagaa gcggcgtgtc gatatagccc gggccgatcg agttcacccg gacgccgtcc
     2941 ttggcatatt cgagcgcggc cgttttcgtc agtccgacga ccccgtgctt ggcggcatta
     3001 tagccggcgg aattggccga gccgaccgag ccgaggatcg aggcgatgtt gacgatcgag
     3061 ccgccgcccg agcgaagcat ggccgggatc tggtatttca tgccgtagaa cacgctgctc
     3121 aaattgacgg cgatcacctt gtcccagccc ttgaggctgt agtcggcggt gggcgcgaga
     3181 tcgccggtga ttccggcatt gttcacggcg acgtcgagcc gcccgaactt ctgaaccgcg
     3241 aactcgaccg atttctcgac cgacgcggag tcgccgacat cctgccggac ggccgccgcg
     3301 gtaccgccac cggcttctat ctcgctcgcg atcctgcgcg ccgcctcttc gtcgatgtcg
     3361 ccgacgatta ccttggcgcc gtcctcggcg aaccgcttgg cgatcgccgc tccgattccg
     3421 gatccggcgc cggtcaccat ggcgaccttg ttttcgaatt ccttggtcat tgttcttttc
     3481 ctttcgattg ttcgggtgac gggcggcgag ggcacgccgc ccgtccgaga gcgcgagctt
     3541 ccgtctcaac gattcagcat ggccgatcgg tgcggcccgg catggtaatc gccggcgggt
     3601 cgctcgcagg gaatgtgtcg tcgagcgcat cgtcgaggag cgcttcgcga cgctcggcgc
     3661 aggcttggtc gcctgcctcc gattgccttt gcatcacttc ctcctgcctg agttgcgggg
     3721 cggctctttc ggagctcacc ccaggagcag gtacgaaccg gcgaaaattg ccggaagccc
     3781 gatgatcagg accaatgcga acaggcccag ttcaactttt tcaacaacag tcattggctt
     3841 tctccgaacc cttggttttc cactcatcct ccgttcgagg acttgccctt gttatagttg
     3901 gaagagcgcc gcaggtggca tcgaaggtct tgaccggaac cgcagactct gcggtgttgc
     3961 ggggcgatga ccgcagctcc caagctcgac cgcatcgacc gcaagatcct ggctgccctc
     4021 caggaggatg cgcggctgac caaccaggcg ctgtcggaac gagtcgcgct atcgcccagc
     4081 gcttgcctcg cgcgggtccg gcggctggaa cgtgagggcg tgatccaagg ctatcatgcg
     4141 cgcctggacc cgttcacgct cgacatcggg ctggtgctct acgccgacat tacgctcgac
     4201 gggcacacgc cggccgagct tgcgcggttc gaggaagcga tcgccgccct gccgcaggtg
     4261 gtggaggcgt cgcacgtcac aggatcgttc gactatatcc tcaaagtggt cgtcgccgac
     4321 atgcgcgaat ggactcagat cgccgagcgc ctttccagcg gcgatctcgg agccgaccgg
     4381 atcaacacgc acgtggtgat gcgaaagccg aagttcttcg tcggctatcc ggtgg
//
LOCUS       DATAKH010000137         5831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21685,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000137 DATAKH010000000
VERSION     DATAKH010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5831
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21685"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /gene="dxr"
                     /locus_tag="VHN55_05550"
     CDS             <1..831
                     /gene="dxr"
                     /locus_tag="VHN55_05550"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEX2803433.1"
                     /translation="AIEAGKTVALANKEALVTAGRLMTDAAERSGSVLLPVDSEHNAI
                     FQCIAGSRREDITRLVLTASGGPFRRSSSEEMRSATPAQAVAHPRWSMGAKISVDSAT
                     LMNKGLELIEAHYLFGLPSERIDVVVHPQSVVHSLVEFVDGSLLAQLGSADMRIPIAY
                     TLAWPERMETPSERLSLADIGKLEFEAPDLERFPALRIARQALESGGGVAIVLNAANE
                     IAVDHFLGGHIGFCDISGIVEQAICECDAPEAATIDEVVALDRETRERTSALISEHCR
                     "
     gene            831..1952
                     /gene="rseP"
                     /locus_tag="VHN55_05555"
     CDS             831..1952
                     /gene="rseP"
                     /locus_tag="VHN55_05555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEX2803434.1"
                     /translation="MLSQPPLWLIVVAFVCMIGPLVFFHELGHYLVGRLFGVGAETFS
                     IGFGREVAGWTDRSGTRWKIGWLPLGGYVRFVGDENVASTPSREIPPELKARSFHHKP
                     VWQRFLIVLAGPMANFLLAIVIFSAFFLAFGAPRTNVVGEIQPNSAASAAGLQPGDTI
                     VAIGGRSTNSFMDIRNYVVLRPGQKVAVRFERSGTVREVPVTLQSDVTTDEFGQKFER
                     GLLGIYPASSALQRVSIPGAVGLGAENTFQLTRLMVEGVGQIITGRRSVKEIGGPLKI
                     AQVAGQRAKLGALEFITLAALISINLGFINLLPVPMLDGGHLFFYAVEAIRRRPVSVQ
                     AQEWAFRGGLALLFALLLFTTVNDLGSFGVWERLGRLIG"
     gene            2029..4671
                     /gene="bamA"
                     /locus_tag="VHN55_05560"
     CDS             2029..4671
                     /gene="bamA"
                     /locus_tag="VHN55_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEX2803435.1"
                     /translation="MIPDKAKISRRAGAVLLIGTIIGGWPAPLLAQDAPQPQQPATPA
                     PAAVPTPEAAGMIRSIAVRGNQRLEPATIIAYSSLTPGQTYTADTLDQALKDLYATSL
                     FSSVVISGGETGNLVITVQENPVINRIVLEGNKKLKEDKILPEIQLKARQIFTAPKVR
                     ADVDRIIELYKRQGRFAARVEPKIVELDQNRVDLVFEIYEGPVSKVRKINIIGNDNFG
                     DGRLIKEMYTRQAGGLLGFLKSNDSYDPDRLAADQQKLRAFYLTQGYADFRVVSALAE
                     LTPDRRDFVITYVVEEGPRYKFGTIEAESALRDLPKEKIMDLVSIAPGEWFDAKAVED
                     TVTGLNEVAGLLGYAFAEINPIYNRDAANRTMNVTFQIGETPRVYVERIDINGNTVTH
                     DKVVRREFRVNEGDAFNSIKIKRSQDRIQSLGYFQENVEIAQTEGSGPDRVVLGVNLE
                     EKPTGQLQFSAGYSSLERFLLSLSVQQTNFRGMGQILDAGLSWSRYSKSISAGFTEPY
                     LFDKQITLGGQIYRRDYNSFNFIGDERNRTYSQVSTGGGFNLGFPISEYLIYGTRYSL
                     VENKVSLSKELYFTDPDGPDDPQPLACDPLKAGRYLCDEIGSRITSSIGHSLAYNDTD
                     GIHPTRGQRLTFSQDFAGLGGSVKYLRTRADATKYKSFGGGWILSAHLEGGYIHPLQK
                     SPGPGRDPIRLTDRFFGNQLRGFDIRGIGPRVFRIPYSAEGTLDEVDFNDASGSRVSD
                     SLGGHAYYMGRLELEVPTSAGVRSLGMRPTAFVDIGSVWGLESPILVDVPGTCNPAVA
                     TNPQIVLSPGQTAADCPAAGYSFIPGFKEFFLGNSPRPRVSIGVGVHWLSPFGPLRID
                     FAKALLKQDGDDTKLFSFNVGTQF"
     gene            4671..5261
                     /locus_tag="VHN55_05565"
     CDS             4671..5261
                     /locus_tag="VHN55_05565"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEX2803436.1"
                     /translation="MNKLLVSAAFVASAFALPTAASAQQRPAILVVDTQNILRTCTAC
                     AAARTQLQQRETTLRSRVQQLRQQLESEGKPIQDAIDRLAGKEPDAALKARITAFQKK
                     QEQANQELENGQTTLQSTAAHVQQQIGGRLMQIVEQSRARRGALVAVSKETTLANDNS
                     IDITSEVLSALNQQLPSVSVTPLPQQQQQQQQPQGR"
     gene            5258..5734
                     /gene="fabZ"
                     /locus_tag="VHN55_05570"
     CDS             5258..5734
                     /gene="fabZ"
                     /locus_tag="VHN55_05570"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEX2803437.1"
                     /translation="MTQASEPNAIGPLDVGRVMAALPHRYPLLLVDRVESLDPDRGIV
                     AIKAVTINEQFFQGHFPGRPIMPGVLIVEALAQAAGVLAVESLGLAGTGKLVYFMAIE
                     GAKFRAPVEPGVLLRLEVEFVQKRTSVCKFAGRALIEGKVAAEANFTAMIADPPAR"
BASE COUNT         1117 a         1881 c         1772 g         1061 t
ORIGIN      
        1 gcgatcgaag ccggcaagac ggtggcgctg gcaaacaagg aagcgctggt tacggcgggc
       61 cggcttatga ccgacgccgc agagcgcagc ggatcggtcc ttcttccggt cgacagcgag
      121 cataatgcta tcttccagtg catcgccggc agtcggcgcg aggacatcac gcgcctggtg
      181 ctcacggcga gcggcgggcc ctttcgcaga tcatcgagcg aagagatgcg tagcgcgacc
      241 ccggcccagg ccgtcgccca tccgcgctgg tcgatgggcg cgaagatctc ggtcgactcc
      301 gcgaccttga tgaacaaggg acttgagctg atcgaggcgc attacctgtt cgggctgccg
      361 tccgagcgga tcgatgtcgt cgttcacccg caatcggtcg tccactccct cgtggaattc
      421 gtcgacggct cgcttctcgc tcaactggga agcgccgaca tgcggatccc gatcgcttac
      481 acgctcgcgt ggcctgaacg gatggagacc ccgtcggagc gcctgtcgct cgccgacata
      541 ggcaagctcg agttcgaggc tcccgacctt gagcgcttcc cggcgcttcg gatcgctcgg
      601 caggcgctcg agagcggggg aggggtggca atcgtactca acgccgcgaa cgagattgcg
      661 gtcgaccact tcctcggcgg gcacatcggc ttttgcgaca tcagcggcat cgtcgaacag
      721 gcgatatgcg agtgcgatgc cccggaagct gctacgatcg acgaagttgt tgcactcgac
      781 cgcgaaacgc gggaacgcac gtctgcacta atctcggaac attgccgctg atgctttccc
      841 aaccgcccct ttggctgatc gtcgtcgcct tcgtgtgcat gatcggaccg ctcgtcttct
      901 tccacgagct cggccattat ctcgtcggac gcctattcgg agtcggtgcc gaaaccttct
      961 cgatcggatt cggccgcgag gtcgcgggat ggacagaccg aagcggaact cgatggaaga
     1021 tcggctggct tccgctcggc ggctacgtcc gcttcgtcgg ggacgagaat gttgccagca
     1081 cgcccagcag ggagatcccg ccggagctca aggcgcgcag tttccaccac aagcccgtct
     1141 ggcagcgatt cctgatcgtg ctggctggcc cgatggccaa tttcctcttg gcgatcgtca
     1201 tcttttcggc ctttttcctg gccttcggcg cccctcgaac gaacgtcgtc ggtgaaatcc
     1261 agcccaattc ggcggcttcg gccgcgggat tgcagcccgg ggacacgatc gtcgcgatcg
     1321 gcggccggag cacgaacagc ttcatggaca tccgcaacta tgtcgtcctt cgccccggcc
     1381 agaaggtcgc tgtccggttc gagcgctccg ggacggtccg cgaggtcccg gtcacccttc
     1441 agagcgacgt caccaccgac gaattcgggc agaagttcga gcgcgggctg ctcggcatct
     1501 atcccgccag cagcgccctt cagcgggtgt ccatccccgg cgccgtgggg ctgggcgccg
     1561 agaacacgtt ccagcttacc cgcctgatgg tcgaaggcgt gggccagatc atcaccggac
     1621 ggcgctccgt gaaggagatt ggcggccccc tgaaaatcgc ccaggtggcc ggccagcgcg
     1681 ccaagctggg ggcgctcgaa ttcatcacgc ttgcagcgtt gatctcgatt aatctcggat
     1741 tcatcaacct cttgccagtc ccgatgctgg atggcggcca tctcttcttc tacgccgtgg
     1801 aagcgattcg ccgccgcccg gtcagcgtgc aggcgcagga atgggctttt cgaggagggc
     1861 ttgccctgct ctttgcgctg ctcctgttca cgaccgtgaa tgatttggga tcattcggcg
     1921 tttgggaacg gctcgggcgc ttgattggct aggtcgcttg gggcagggca gcacatccag
     1981 acgaccgcgg catttgcgaa gcggcacagc attcaaggcg gggaacgcgt gattccagat
     2041 aaagcgaaaa tctccaggcg tgcaggcgcg gtgctcctga tcggcaccat catcggaggc
     2101 tggccggcgc cattgcttgc acaggatgct ccgcagcctc agcagccggc gacccccgca
     2161 cctgcggcgg tgccgacccc cgaggccgcc ggaatgattc gctcgattgc cgttcgcggc
     2221 aaccagcggc tcgagcctgc gacgatcatt gcctattcga gcctgacccc gggccaaacc
     2281 tacaccgccg acactctcga ccaggcccta aaggaccttt acgcgacctc gctattctcg
     2341 agcgtcgtca tctccggcgg cgaaaccggc aacctggtga tcacggtcca ggaaaacccg
     2401 gtcatcaatc gcattgtcct ggagggcaac aagaaactca aggaggacaa gatcctcccc
     2461 gagatccagc tcaaggcgcg gcagatcttc actgctccca aagtccgggc cgatgtcgat
     2521 cgcatcatcg agctctacaa gcgccagggg cgcttcgcgg cgcgggtcga gcccaagatc
     2581 gtcgagctcg accagaaccg ggtcgacttg gtcttcgaga tttacgaggg gcccgtttcc
     2641 aaagtccgca agatcaacat catcggcaac gacaacttcg gcgatggccg gctgatcaag
     2701 gaaatgtaca cgcgccaggc cggcggcctg ctcggcttcc tgaagtcgaa cgacagctac
     2761 gatccggacc ggctggcggc cgaccagcag aagctccgcg ccttttacct gacccagggc
     2821 tacgccgatt ttcgcgtcgt ttcagcgctc gccgagctaa cccccgatcg ccgcgacttc
     2881 gtcatcacct atgtcgtcga ggaaggtccc cgctacaagt tcgggacgat cgaagcggaa
     2941 agcgcgcttc gcgaccttcc caaagaaaag atcatggacc tggttagcat cgctccgggt
     3001 gaatggttcg acgccaaggc ggtcgaagat acggttaccg gattgaatga agtggccggc
     3061 ttgctcggct atgcattcgc cgagatcaac ccgatttata atcgtgacgc cgcgaaccgg
     3121 acgatgaacg ttacgttcca gatcggcgag acgccgcggg tctatgtcga gcggatcgac
     3181 atcaacggca ataccgtcac tcacgacaag gtggttcggc gcgagttccg ggtgaacgag
     3241 ggcgacgcgt tcaattcgat caagatcaag cgttcgcagg accgaatcca gtcgctcggt
     3301 tacttccagg aaaacgtcga gattgcgcaa accgaaggct ccggcccgga ccgggtcgtg
     3361 ctcggcgtga atctagagga aaagccgact ggccagctgc aattctccgc cggctattcc
     3421 agcctcgaac gtttcctcct gtcgctgtcg gtgcagcaga caaacttccg cggaatgggc
     3481 cagattctcg atgccggact tagctggtcc cgatactcga agtcgatttc ggccgggttt
     3541 accgagccct acctgttcga caagcagatc acgctcggcg gccagatcta ccggcgcgac
     3601 tacaacagct tcaacttcat cggcgacgag cggaacagga cctattcgca ggtcagcacg
     3661 ggcggcgggt tcaacctcgg cttccccatt tctgaatatc tgatctacgg cacgcgctat
     3721 tcgctggtcg agaacaaggt atcgctgagc aaggagctct atttcaccga ccccgacggg
     3781 cccgacgatc cgcagccact ggcgtgcgat ccgttgaagg ccggccgcta cctgtgcgac
     3841 gaaatcggga gccggataac atcgtcgatc ggccattcgc tcgcctataa cgacacggac
     3901 ggcatccatc ccacccgcgg ccagaggctg accttctccc aggacttcgc cggccttggc
     3961 ggaagcgtga aatatcttcg cacgcgcgcc gatgcgacga aatacaagtc gttcggtggc
     4021 ggttggattc tttccgccca cctcgaaggc ggttacatcc acccgctgca gaaatcgccg
     4081 ggaccggggc gcgacccgat ccggctgacc gaccgcttct tcggcaacca gctgcgtggt
     4141 tttgacatcc gcggcatcgg gccacgagtc ttccggattc cctattcggc cgaaggcacg
     4201 ctggatgaag tcgacttcaa tgacgccagc ggcagccggg tcagcgattc gcttggtggc
     4261 cacgcatatt acatgggccg gctcgagctc gaggtgccga cgagcgccgg cgtccgaagt
     4321 ctcggcatgc gcccgaccgc tttcgtcgac atcgggtcgg tatggggcct cgaaagcccc
     4381 atcctcgtcg acgtgcccgg aacctgcaat ccggccgttg cgacgaaccc gcagatcgtg
     4441 ctctcgcccg ggcagaccgc agccgactgc ccggcagccg gctattcgtt cattccagga
     4501 ttcaaggaat tcttcctcgg gaattcgcct cgcccgcgcg tgtcgatcgg cgtcggagtc
     4561 cattggctct cgcccttcgg gccactcagg atcgacttcg cgaaggcgct gctcaagcaa
     4621 gacggcgacg acaccaagct cttttcattc aacgtaggaa cacagttctg atgaacaaat
     4681 tgctcgtatc cgccgccttc gtggcgagcg catttgccct tccgacggcg gcctctgcac
     4741 agcagcggcc cgcaatactg gtcgtcgata cgcaaaacat cctccgcacc tgcactgcct
     4801 gcgcggcggc gcggacccag cttcagcaga gggaaaccac tcttcgaagc cgcgtgcagc
     4861 agctgcggca gcaactggag agcgaaggca agcccattca ggacgcgatc gacaggctcg
     4921 caggcaaaga gcccgacgcc gcgctgaaag caaggattac cgctttccag aagaagcaag
     4981 agcaggctaa ccaggagctg gagaacggcc agactacgct ccagtcgact gccgctcacg
     5041 tgcagcagca gatcggcggc aggctcatgc aaatcgtgga gcagtctcgg gcgcgtcggg
     5101 gcgcattggt cgccgtttca aaagaaacga cactcgcgaa cgacaacagc atcgacatca
     5161 cttcggaagt cttgagcgcg ttgaatcagc agcttccgtc ggtaagcgtc actccactcc
     5221 cgcagcagca gcagcagcag caacagccgc agggacggtg actcaagcct cggaaccgaa
     5281 cgccatcggg ccgctcgatg tcgggcgggt gatggcggcg cttccgcacc gatatccgtt
     5341 gctcctcgtc gaccgggtcg agagcctcga cccggatcgc ggaatcgtcg cgatcaaggc
     5401 ggtgacgatc aacgagcagt tcttccaggg gcatttcccc gggcggccaa tcatgccggg
     5461 cgtcctgatc gtcgaggcgc tcgcccaggc cgcgggcgtc cttgccgttg agtcgctcgg
     5521 cctcgcgggg accggcaagc tggtctattt catggccatt gagggcgcga aattccgcgc
     5581 ccccgtcgaa cccggagtgc tccttcgcct cgaggtcgag ttcgtccaga agcgaaccag
     5641 cgtctgcaag ttcgctggcc gggcgcttat cgaggggaag gtcgcagccg aagccaattt
     5701 cacagcgatg atcgcggatc cgcccgctcg ataaccccta gcggctgcca atccgtatcc
     5761 cggcatggat tgcccggcct tcggtgcggt agccgaaaac gtcctggtag gatgagtcga
     5821 acaggttcga c
//
LOCUS       DATAKH010000138         4661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_18213,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000138 DATAKH010000000
VERSION     DATAKH010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18213"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1201)
                     /locus_tag="VHN55_05575"
     CDS             complement(<1..1201)
                     /locus_tag="VHN55_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX2803438.1"
                     /translation="MKIACIGGGPAGLYFAISMKLRNPEHQIEVFERNPPGVTWGWGV
                     VFSDQTLENLTANDPQTAQIIASEFAHWDDIDVHFKGECITSSGHGFIGIGRKRLLEI
                     LTDRARELGAVLHFESECDPADPKWNDYDLVIAADGANSRFRDAHEEAFQVDIDVRAN
                     KFVWLGTSKVFDAFTFAFEETEHGWIWAHAYRFAPDCSTFIVECSEDVWRNFGFDTMS
                     QDESIAACEKLFAKYLDGHALQSNATHLIGSAAWLNFRRIKCDNWAVGNTILLGDAAH
                     TAHFSIGSGTKLALEDAIKLAEVLNRPGLSRDAALMEYQAERNLEVLKLQNSARNSTE
                     WFETLGRYLHFEPLQFAYSLLTRSQRISHENLRLRDREWLEGVERWFWKRATDGRSNK
                     TAPPMFAP"
     gene            1511..1981
                     /locus_tag="VHN55_05580"
     CDS             1511..1981
                     /locus_tag="VHN55_05580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803439.1"
                     /translation="MVTESLPWLPPFGRNDFLIVANPTDRLEKQIFVNLEERKNVCHA
                     NPQRPQALRQACAAAAAGREALPGPLERLVKVPDEIGPEVWWSYFRPTEKPGAAPQIV
                     VSCTSMEGSLIPAKCNRMDSYQDLIVTYSIDERDLPRLVAIDRKIDQLLASWEL"
     gene            complement(2013..2402)
                     /locus_tag="VHN55_05585"
     CDS             complement(2013..2402)
                     /locus_tag="VHN55_05585"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2803440.1"
                     /translation="MANIIQVTPFMLVPDLRQALDFMTGVLGFSVDYEVRDYAYVSRE
                     GAGLRILEAGPGNPFQPGTRRFAYYFDCRDVDALYAELKPRLDTLPAGDVHGPADKPY
                     RQRELLVLAPDGNLIAFGQAIKAVDSE"
     gene            complement(2414..3565)
                     /locus_tag="VHN55_05590"
     CDS             complement(2414..3565)
                     /locus_tag="VHN55_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019052357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX2803441.1"
                     /translation="MGTAYVVDAVRTAGGRRDGALKDVHPADLGAAVLNALVERTGID
                     PAAIDDVIVGCVSQIGDQSCHIGRSMVMASKLPDSVPAVTIDRQCGSSQQSVHFAAQA
                     VMSGTQDLVIAAGVESMSRVPMGTPVFLPLQAGIGTGPWPKSVQDRYGVSEFTQFRGA
                     EMMAKKYGFAREQLDAFALESHRKAAAATQAGAFDSEIVQVGDHRSDEGIRYDASIEG
                     LAGLKTLVPDGVITAGNASQICDGASAVLVASETALKAHNLKPLARIDHLTVTAGDPV
                     IMLDEPIRATRTALEKSGRAIADIDLYEVNEAFAPVPLAWLGEVEADPAKLNVHGGAI
                     ALGHPLGASGAKLMATLVHALHRHGGRFGLQTMCEGGGIANVTIIEALR"
     gene            3665..>4661
                     /locus_tag="VHN55_05595"
     CDS             3665..>4661
                     /locus_tag="VHN55_05595"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2803442.1"
                     /translation="MADDAIDARLMGDRRPALAQSRTLRLFSVFILYVAQGVPIGLFW
                     FAIPAWMAANGASAADVGFVLGLTALPWSLKLVNGFIMDRYTLLAMGRRRIWLIGAQL
                     TMVLLLLVCALAAPDVKDIVLLGVIGFAVNAATTFQDVAVDGLAVDIMEEEERARASG
                     MMFGGQAIGMSLSTALSGAAIAAYGPSAAYLLSALFIGLVTLFVLLTRERPGERLLPW
                     SSGAPSAVNLNIQARRWWPILKNTFSAIFRPTSLFYVVISMVGGIQYGVMVGATPLVA
                     TTFAGWAQEHVTAISGTGQLIGGIIGMTIGGMLGDRLGAKRATILVFGCWLALNLT"
BASE COUNT          798 a         1418 c         1537 g          908 t
ORIGIN      
        1 acggcgcgaa catcggcggc gcggtcttgt tcgaacgtcc gtcggtggcg cgcttccaga
       61 accagcgctc gacgccctcg agccattcgc ggtcgcgaag gcgaaggttc tcgtggctga
      121 tgcgctggct tcgggtgagc agcgaataag cgaactgaag cggctcgaag tggaggtagc
      181 ggccgagcgt ttcgaaccat tcggtcgagt tacgggcgct gttctggagc ttgagcacct
      241 ctaggttgcg ctcggcctga tactccatca gcgcggcgtc gcgtgacagg ccggggcggt
      301 tgagaacttc cgcgagcttg atcgcatctt cgagcgccag cttcgtcccc gacccgatcg
      361 agaagtgcgc ggtgtgcgcg gcatcgccca gaaggatcgt attcccgacc gcccaattgt
      421 cgcacttgat gcggcggaag ttgagccagg cggccgagcc aatcaggtgg gtcgcattgg
      481 attgcaacgc gtgtccgtcg agatatttgg cgaagagctt ctcgcaggcg gcgatgctct
      541 cgtcctgcga catcgtgtcg aagccgaaat tacgccacac gtcttccgaa cattcgacga
      601 tgaacgtcga gcaatcgggc gcgaagcgat aggcgtgggc ccagatccag ccgtgctccg
      661 tctcctcgaa cgcgaaggtg aaggcgtcga acaccttcga cgtgccgagc cagacgaact
      721 tgttggcgcg gacgtcgatg tcgacctgga atgcctcttc atgcgcgtcg cggaagcgcg
      781 aattggcgcc gtccgcggcg atgactaggt catagtcgtt ccacttcggg tcggcgggat
      841 cgcactcgct ttcgaagtga aggaccgcgc cgagctcgcg ggcgcggtcg gtcaggattt
      901 cgagaaggcg cttgcggccg atgccgatga agccgtggcc tgacgaggtg atgcactcgc
      961 ccttgaagtg aacgtcgata tcgtcccaat gggcgaactc ggacgcgatg atttgcgccg
     1021 tctggggatc gttcgcggtg aggttttcga gcgtctggtc ggagaagacg actccccagc
     1081 cccaggtgac tcccggcggg ttgcgctcga atacctcgat ctggtgctcc gggttccgga
     1141 gcttcatcga gatggcgaaa tagagccccg ccggcccgcc gccgatgcag gcgatcttca
     1201 tgccggccgc cttacgttcc ctaaagtcac gcgatgagcg accattttcg tgacgttagc
     1261 ggcacgcgag cggaagcgga catggcaagg catggctcga tcgaattgca tcttcgcagc
     1321 atggcacaac agcgctactg taggacaggc taatgtccgc tttgggtgga aagcggacgt
     1381 ttgcaattgc taggctgtcc gggtggtccg aagactaacc ttcactgtcg tttcggttgc
     1441 tctcgtggcg tcttgctcga ccaggcaata cacagttggg cagcacaagt tcagagttcc
     1501 aagaacgcac ttggttacag agagcctccc ttggctgccg cctttcgggc gtaacgactt
     1561 cctcattgtc gcgaacccta cggatcggct cgagaaacag atttttgtca atctcgagga
     1621 gcggaagaac gtgtgccacg ccaatccgca gcgcccacaa gccttgcgcc aagcatgcgc
     1681 ggcggcggcg gcagggaggg aggcattacc cggccctctg gaacgcttgg tcaaagtccc
     1741 ggatgagatc ggccccgagg tctggtggtc gtatttccgg cctactgaaa agccaggagc
     1801 cgcgccacag atcgtagtgt cctgcacaag tatggaaggg tcgctgatcc ccgcgaaatg
     1861 caacaggatg gacagctacc aagatctcat tgtgacgtac tcgatcgatg aacgcgatct
     1921 gccacggctg gtcgcaattg atcgtaagat cgatcagttg ctcgcttctt gggagctcta
     1981 atgtcccttt tgggtcgaaa acggacacca ggttattcgg aatctaccgc ctttatcgcc
     2041 tggccgaacg cgatcaaatt gccgtcgggg gccagcacca aaagctcgcg ctggcggtag
     2101 ggcttgtcgg cgggtccatg aacatcgccg gcaggaagcg tgtcgagcct gggcttgagc
     2161 tcggcgtaga gcgcgtcgac gtcgcggcag tcgaaataat aagcgaagcg tcgggtgccg
     2221 ggctggaacg gattgcccgg acctgcctcg agtatcctca ggccggcgcc ttcgcggctg
     2281 acataggcat agtcgcggac ctcgtaatcg acgctgaacc caagcactcc ggtcatgaag
     2341 tccagcgcct gccggaggtc gggaacgagc atgaacggag tcacctggat gatgttggcc
     2401 acgtccccct ccgctatcga agcgcctcga taatcgtcac attggcgatg ccgccccctt
     2461 cgcacatcgt ctgcaggccg aagcggccgc cgtggcggtg gagggcgtgg acaagggtcg
     2521 ccatcagctt ggcgcccgac gcgcctagcg ggtggccgag ggcgattgcg ccgccgtgga
     2581 cgttgagctt cgccgggtcg gcctcgactt ccccgagcca tgccagcggc accggtgcga
     2641 aggcttcgtt gacttcgtag aggtcgatgt cggcgattgc gcggcccgac ttttcgagcg
     2701 cggtgcgggt ggctcggatc ggttcgtcga gcatgatgac gggatcgccg gcggtgacgg
     2761 tgagatggtc gattcgtgct agcggcttga ggttatgcgc tttcagcgcg gtttcgctgg
     2821 ccaccagcac agccgacgct ccgtcgcaga tctggctggc attcccggcg gtgatcacgc
     2881 cgtcaggcac aagcgtcttc agcccggcga gaccctcgat cgatgcatcg tagcggatgc
     2941 cttcgtcgct tcggtggtcg ccgacctgga cgatctctga gtcgaacgct ccggcctggg
     3001 tcgcggccgc cgccttgcgg tgactctcta gcgcgaaggc gtcgagctgc tcgcgggcga
     3061 agccgtactt cttcgccatc atctcggcgc cgcggaactg ggtgaattcg ctgaccccgt
     3121 agcggtcctg caccgatttc ggccacgggc cggtgccaat tcccgcctgc agcggaagga
     3181 acaccggcgt acccatcgga acgcgagaca tgctttcgac ccccgcggcg atgaccaaat
     3241 cctgggtgcc gctcatcacc gcctgggcgg cgaaatgcac cgattgctgg gagcttccgc
     3301 actggcggtc gatggtgacc gcggggacgc tgtcgggaag tttcgaggcc atcaccatgc
     3361 ttcgcccgat gtggcagctc tggtcgccga tctggctgac gcagccgacg atcacgtcgt
     3421 cgattgccgc cgggtcgatt ccggtccgtt cgaccaaggc gttcagcacc gcggcgccga
     3481 gatccgccgg atgcacatcc ttgagcgcgc cgtcgcggcg gccaccggcg gttcggactg
     3541 catcgacgac ataggctgtc cccatggcgg gacggcataa caggagtgaa gcgccgccga
     3601 aatgctgctg gctggggcgg gcaaatccgc ttatgactcg ccgcgttccc ggggggggca
     3661 cgccatggcc gacgatgcaa tcgacgccag gttgatgggg gatcgccgtc cggcgctggc
     3721 ccaaagccgc acgctcaggc tgttttccgt gttcatcctc tatgttgcgc agggcgttcc
     3781 gatcggcctg ttctggttcg cgattccggc gtggatggcg gccaacggcg ctagcgccgc
     3841 cgacgtcggt ttcgtccttg ggctgactgc gcttccttgg agcctgaagc tcgtcaacgg
     3901 cttcatcatg gaccgctata cgttgctggc gatgggccgg cgacggatct ggctgatcgg
     3961 cgcgcaactg acgatggtgc tcctgctcct tgtctgcgcg cttgcagcgc cggacgtgaa
     4021 ggatatcgtc ctgctcgggg tcatcggttt cgcggtcaac gccgccacca ccttccagga
     4081 tgtcgccgtc gacgggctcg cggtcgacat catggaagag gaggagcgcg cacgcgccag
     4141 cggaatgatg ttcggcgggc aggcgatcgg gatgtcgctg tcgaccgcgc ttagcggtgc
     4201 agcgatcgcc gcttatggcc cgagtgcggc atatttgctg tcggcgctgt tcatcggcct
     4261 cgtcacgctg ttcgtcctgc ttacccgcga gcgccccggc gagcgcttgc tgccgtggtc
     4321 gagcggcgcg ccgtccgcgg tgaacctcaa catccaggcg cgccgctggt ggccgatcct
     4381 gaagaataca ttcagcgcga tctttcgccc cacgagcctg ttctacgtcg tgatctcgat
     4441 ggtcggcggc attcaatacg gagtgatggt cggagccact cctctggtcg caaccacctt
     4501 cgccggctgg gctcaggagc atgtcacggc aatcagcggg acgggccagt tgatcggcgg
     4561 aatcatcggc atgaccatcg gcggaatgct tggcgacagg ctcggcgcaa agcgggcgac
     4621 gatcctcgtc ttcggctgct ggctggcgct caacttgacc a
//
LOCUS       DATAKH010000139         5391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21737,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000139 DATAKH010000000
VERSION     DATAKH010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5391
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21737"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /locus_tag="VHN55_05600"
     CDS             <1..801
                     /locus_tag="VHN55_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2803443.1"
                     /translation="FHAMWAAVAVLVVAVIGRIAGGQVPPAPPDPAAPPWKMDWHIVR
                     ASITLVNATLHVPRLFLAILSISFFWAMGTVLAAQFPPLVKNSLSADQSVATLFLAIF
                     SVGVAIGSIAVNRLLKGKVAARFAPASALGMGLFVLDLFRRVHSWPQLPGDQLNGIAA
                     FLAMPNGPWVVFDLLGVAIAGGMFVVPLYAFLTITVPKAETARTIAANNIVNSGFMVA
                     ATLILTGAVQLGVTVADSLLIVAIASIVAAWLGWKLHKACDDDRCSVV"
     gene            complement(798..968)
                     /locus_tag="VHN55_05605"
     CDS             complement(798..968)
                     /locus_tag="VHN55_05605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803444.1"
                     /translation="MAHARAAIALDPRLFGRAFRLHSDREGQSGWAISDDAKLFATTF
                     AAGFLFVSILIA"
     gene            complement(1119..1205)
                     /locus_tag="VHN55_05610"
     tRNA            complement(1119..1205)
                     /locus_tag="VHN55_05610"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1170..1172),aa:Leu,seq:taa)
     gene            complement(1220..1519)
                     /locus_tag="VHN55_05615"
     CDS             complement(1220..1519)
                     /locus_tag="VHN55_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEX2803445.1"
                     /translation="MIRSELVQKLCQDFPDLNQREVESVVSAVFDSITDQLAQGGRVE
                     LRGFGAFSTRQRDARLGRNPRTGESVQVDAKRVPYFKPGKEMRERLNINGAETEL"
     gene            complement(1804..3510)
                     /gene="rpsA"
                     /locus_tag="VHN55_05620"
                     /pseudo
     CDS             complement(1804..3510)
                     /gene="rpsA"
                     /locus_tag="VHN55_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125221.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
     gene            complement(3984..4406)
                     /locus_tag="VHN55_05625"
     CDS             complement(3984..4406)
                     /locus_tag="VHN55_05625"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEX2803446.1"
                     /translation="MSELDKLRDDHLVLANLFRRLRDIIEQPEPPSQLVLFDIRRELL
                     SSLLAHLKLEDWALYPRLAASADSSISETGRRFQNEMGGLAPAFLIYCDKWSASSIQS
                     DWAGYCSETRGILDSLENRLDCEDRELLPLLERLDAAA"
     gene            5220..>5391
                     /locus_tag="VHN55_05630"
     CDS             5220..>5391
                     /locus_tag="VHN55_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014075683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX2803447.1"
                     /translation="MPESPQVDADPPYLKGLNPPQREAVLTTEGPVLVLAGAGTGKTS
                     ALTARLANLIATR"
BASE COUNT          900 a         1778 c         1642 g         1071 t
ORIGIN      
        1 ttccacgcga tgtgggccgc ggtcgcggtc ctcgtcgttg ccgtcatcgg caggatcgcg
       61 ggaggtcagg ttccgccagc gccgcccgac cccgctgccc cgccgtggaa gatggattgg
      121 cacatcgtcc gggcgtcgat cacgttggtc aacgcgacct tgcacgtgcc gagactgttc
      181 ctcgccatcc tgtcgataag cttcttctgg gccatgggaa cggtgctcgc cgcgcagttc
      241 ccgccgctag tcaagaacag cctttccgcc gaccaatcgg ttgccacctt gttcctcgca
      301 atcttctccg tcggcgtggc gatcggctca atcgcagtga accggcttct caagggcaag
      361 gtggcggcac ggttcgcccc ggcgtcggcg ctcgggatgg ggctgttcgt cctcgacctg
      421 ttccgccgtg ttcattcatg gccccagctg cccggggacc agttgaacgg gatcgctgcc
      481 ttcctggcaa tgccgaatgg gccttgggtc gtattcgacc tgctcggagt cgcgatcgcc
      541 ggcggcatgt tcgtcgtccc gctctacgcc tttcttacga ttaccgtgcc caaggcggag
      601 actgcgcgaa cgattgcggc gaacaatatc gtcaactccg gcttcatggt cgcggcgacg
      661 ctgatcctga ccggcgccgt ccagctcgga gtcacggtcg ccgacagctt gctgatcgtc
      721 gcaatcgcaa gcatcgtcgc cgcatggctt gggtggaagc tccacaaggc ctgcgatgac
      781 gatcgctgca gcgtcgttta ggcgatcagg atcgagacga agaggaaacc ggcggcaaag
      841 gtcgtcgcaa acaatttcgc atcgtcggaa atcgcccagc ccgattggcc ctcgcggtcc
      901 gagtgaagtc ggaacgcgcg cccgaacagg cgcgggtcca acgcaattgc ggcgcgtgcg
      961 tgtgccatgg ggaaatgctt aacggccatt taaccatgtt caacggccga tttccgcgaa
     1021 ttgctccacg cgtcccatag cgggacggcg tcaggcgatt ggtatgtgga ggcaggagca
     1081 ttgaattcgc caatcccgga ttggcttgaa ttcaaggctg gtgcggacgg tgggagtcga
     1141 acccacactc ccgtttgggg aagaggattt taagtcccca gcgtctaccg ttccgccacg
     1201 tccgcagcgg gtcggatgac tataactcgg tttcggcgcc gttgatgttc agccgttccc
     1261 gcatttcctt gcccggcttg aaatagggga cccgcttggc gtccacctgc accgattcgc
     1321 cggtgcgcgg attgcggccg agccgcgcgt cgcgctggcg ggtcgagaaa gctccgaacc
     1381 cgcgaagctc gacccgtccg ccctgggcca actggtcggt gatcgaatcg aacacggcac
     1441 ttacgacact ctcgacctca cgctggttga ggtccgggaa gtcctggcac agcttctgaa
     1501 ccagttcgga acggatcatg gcgagtcccc gctaaattcg gtcgccctcc ggcacagagg
     1561 gctgggctca cgctgtcagg aaagtcctga ccgcgcaagc ccatgtgaat gttacttctt
     1621 cttcttggcc gcagctttct tcgcagccgc cttcttggcg accggctttt cgtcagtcgt
     1681 tgcctcatcg gcggccgagt cctcgcctgc aggcgcttcc tcggtcgtag gctccgatgc
     1741 cgccttttcc gcagccgcct tcttggcggc cggcttctcg gcggctggct tcgaggtcgc
     1801 cttcttggtt tcggcttcct tcagcgcctg cccgaggatg tcgccgagcg acgcgcccga
     1861 gtcggacgaa ccgaactgcg cgaccgcctg cttctcctcg gcgacctgga gcgccttgat
     1921 ggagaagttg ggcttcttcg agcggtcgaa cccgctgacc atcgcgtcga acttctggcc
     1981 gacctggaac cgctccggac gttgctcgtc gcgatcgcgg ccgaggtcgc tgcgcttgac
     2041 gaagccggtg gctccgccgt ccgcgacctg aacgtcgagc ccgccgtcct tcacctcgag
     2101 aacttcgatg gtgacgacgt cgcccttctt gaccgcgccg cctgcggcaa ccgtgcttcc
     2161 gccgaccccg ccgcgctcaa gctgcttcat gccgagcgaa atgcgctctt tctcgacatc
     2221 gatatcgaga acgacggcct tgaccgtctc gcccttgtgg tgaagcgcca gcgcttcctc
     2281 gcccgagacc ccccaggcga tttcggacat gtgaaccatc ccgtcgacat cgccgggaag
     2341 gccgatgaag aggccgaact cggtcgagtt cttgacctcg ccctcgacct gggcgccgac
     2401 cggatatttg tccgcgaatt cggcccaggg attggcctgc gcctgcttga gaccgagcga
     2461 gatgcgccgc ttctcctcgt cgacctcgag gatcttcacc tcgacctcct ggcttgtgga
     2521 gacgatcttg cccgggtgga cgttcttctt ggtccagctc atctcggaga cgtggaccag
     2581 gccctcgatg cccggctcga gctcgacgaa ggcgccatat tcggtgatgt tcgtcactcg
     2641 gccggtgaac gtgccgtcga tcggatattt cgcgctcgcg ccctcccatg ggtccgcctc
     2701 gagctgcttc attccgaggc tgatccgctg ggtctcgcgg ttgatgcgga tgatctgcac
     2761 cttgaccgtg tcgccgatgt tgaggacctc ggtcgggtgg ttgacccgct tgtagctcat
     2821 gtctgtgaca tggagcaggc cgtcgatgcc gccgaggtca acgaaggcgc catagtcggt
     2881 gatattcttg accacgccct cgaccacctg gccctcggtc agcgactgga taaggccgct
     2941 gcgctgctcg gcgcgatgct cctcgaggat tgcacggcgc gaaacgacga tgttgccgcg
     3001 gcggcggtcc attttaagga tctggaacgg ctgcggcatg tccatcagcg gaccgacgtc
     3061 gcgaaccgga cggatgtcga cctggcttcc ggggaggaag gcgacggcgc cgccgaggtc
     3121 gacggtgaag ccgcctttga ccctaccgaa gatcacgccg tcgactcgat tgccttcctc
     3181 atattccttc tcgagcgtgt cccaggcggc ttcgcggcgg gcgcggtcgc gcgacagcat
     3241 cgcttcgccc tgtgcattct ctaccctgtc gacgaacact tcgacctcat cgccgacctt
     3301 cagctcggcc ttctggccgg gggcggcgaa ttcgcggagc gggactcgcc cttcggactt
     3361 caatccgacg tcgatgaccg ccaggtcgtt ttcgattccg gtgacggtgc ctttgacgac
     3421 cttgccttcg aagctttcgt cctcgcctcc gaggctctca ttcagaaggg ccgcgaaatc
     3481 gtcgcgggtc ggaaatgccg tagtggccat agaatgtgtg tgtcctagac tttaatcggg
     3541 cctgccgctc ggccgccacc gtggcgaacc ttcacatgcg gacctggtta catgcactgc
     3601 cgtgaccggc tcatccgggc acggcgccct ttgcagctgt cgcatggcaa atgagccagc
     3661 gcaggcaatc cccggggact gccgagcagg cgcatcgcgt cccgctggtt acgctagctc
     3721 gccaatgtga cgggctgccg cggataccga atgagcaccc gccggacgcg gcgccctata
     3781 tgcgagcgaa ccccgaaggg caagaaactg ctgctcaata ggaatttccc tattgcgcga
     3841 taggaacaaa tagggaacaa ggctcgcttc ggagtcgtgc tatgcttgtt ctcgatcctg
     3901 caatggtgat tgccgtcgct gcactcgtca gcagcgtatc cgcgttcgta tgggcggtgc
     3961 ggcgaaagcc gtgacttgcg gcttcaggcg gcggcgtcca gccgctcgag cagcggaaga
     4021 agctcacggt cctcgcaatc gaggcggttc tcgagcgaat cgagaatgcc gcgcgtttcg
     4081 gagcaatagc cggcccagtc ggattgaatc gagctcgcgc tccacttgtc gcaatagatg
     4141 aggaaggccg gcgcgagccc gcccatctcg ttctggaatc gcctgcccgt ttcgctgatc
     4201 gagctgtcag cgctggccgc caggcgcggg tacagggccc agtcctcgag cttgaggtgc
     4261 gcgagaaggc tcgacagcag ttcgcggcgg atgtcgaaca gcacgagctg cgacggcggc
     4321 tccggctgct cgatgatgtc gcggagccgg cggaacaggt tcgccagcac gagatggtcg
     4381 tcgcgtaatt tatcgagctc ggacatcggc cgtttccttc caatcctctc tcaggattga
     4441 acggaaaagg ctcacaatcg gtgaacgcgt gcagttaatg cgcggtctct tgcaccgaac
     4501 ttgcggttga tcgatccgaa gcggtgaaac gcaaccgccg gcgataaatg gaggcagggg
     4561 agactcgtgc attccccaaa cgaaatgggg gccggcatcg ctgccagccc ccactgcacc
     4621 gagcgaagga tccgccaaat ctcgaaacaa ggtcccaggg gaaccaaatc ccgaattccg
     4681 gctcaccagc tcaggcgtcg cttcccatca accaactccc tccgaagagg agcctgacga
     4741 cctctactcc agtgcgccgc ccgaaggttc gcttctgttt cgcgccgccc ggcctgaccg
     4801 aagtcaaagc cgaccgatgt tccgcggccc ttcttgggat gaccctctct tgcgtcccgc
     4861 tttgcctcca acgacccgaa ggccgtcttc agccgcgtcg cgcaatcgaa agatcatctc
     4921 ttccggcgcc tcgtcccggc tggccccgct ttcagctccc gaaagagctt cggcattgcc
     4981 cgccgcggag atcggacctt aagtcacctg ccgcatctcg ctgccgttgc cggccctccg
     5041 atgaggccgg gaccgccgtc ccgatcacag ttggaccttg cgccccgttt ccgagtcgcg
     5101 gcaagcgaaa aatccgggtg caaagctgtg gataacgggg atatcgggaa caaccgtcgg
     5161 aaccattttg atcggcgcaa tcggttgccg tttcgttccc tccgccttac ctccggcaag
     5221 tgcctgaatc gccacaagtc gatgccgatc cgccttatct gaagggcctc aacccgccgc
     5281 agcgcgaggc cgtgctgacg accgaaggcc cggtgctcgt cctcgccggc gccggcaccg
     5341 gcaagacctc cgcgctcacc gcgcgcctcg ccaacctgat cgcgacgcgg a
//
LOCUS       DATAKH010000140         9127 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_37835,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000140 DATAKH010000000
VERSION     DATAKH010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9127
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37835"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1539)
                     /locus_tag="VHN55_05635"
     CDS             complement(100..1539)
                     /locus_tag="VHN55_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX2803448.1"
                     /translation="MPNEPIRSLLLVDADPAERRRISAIASRSGWTVVGADGLETAVA
                     ILRGPYGPEVRVALLGNWDADGAGPMIDGLRSCHPGLPVLVLAQEDALPRAVDAIRAG
                     ATDFLGRPVAPERLLEALSAAADRRRPTGELTPIAEKLAPPLSLDQLVGATPEFRSSL
                     AVAAKAARNRLPILIVGEPGTGKEAFARAIHDASLRSKAPLVSLDCKAVAANIIDSEL
                     FGHEAGAFPGAFSAKDGKLVEANSGTLLLDDITALPATTQEALDRALATGEVRPVGCN
                     GSHSVDVRLIATSGRPLDDTYNPQLRERLEGTVVTLPPLRERSSDIPALTRHLLARFA
                     EQKLIKPLTIDNGALTVLMRYGWPGNVRQLAGVLLRAGLKCDSSSLTAEHFPHIVTQS
                     QFNARATDFIPRMTKQSSDAAVNGMGAITVFDEEGHVRPLDEIEADLIRLAIGHYRGR
                     MTEVAKRLGIGRSTLYRKLADIGIDTNAA"
     gene            1663..1815
                     /locus_tag="VHN55_05640"
     CDS             1663..1815
                     /locus_tag="VHN55_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803449.1"
                     /translation="MAHDEEPILTNPPTQEVARHVNDYSRFTALLKWGAIVSLIVAFI
                     VLMLIS"
     gene            1815..2945
                     /locus_tag="VHN55_05645"
     CDS             1815..2945
                     /locus_tag="VHN55_05645"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEX2803450.1"
                     /translation="MKIAVLKETAPGETRCAAIPETVKKFAALGAEVAVEKGAGADAG
                     VPDSAFKEAGAAIGSRKDVLAGAGIILCINGPDPDALGGAPKGALLVGALDPLRRGDA
                     VKAYAKAGLQALAMEWMPRITRAQSMDVLSSQSNLAGYKAVVDAASAYGRAFPMMMTA
                     AGTVSPAKVFVMGVGVAGLQAIATAKRLGAQVSATDVRSATKEQIQSLGAKPIFVEKV
                     SGIEGEGAGGYATEMSDEYRKAQAELVSSHIAKQDIVITTALIPGKPAPRLISDAQIA
                     TMRPGGVIVDLATEAGGNVDGTVAGKTVEKHGVTIIGASNLARSLPADASALFARNLY
                     NFLSAFWDKDKNAPELPDDDEIVAAIRLTRDGKVVSERLAEA"
     gene            2966..4081
                     /locus_tag="VHN55_05650"
     CDS             2966..4081
                     /locus_tag="VHN55_05650"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX2803451.1"
                     /translation="MLVIGGGVAGLSAAAALSEHARVTVLEAEESIGYHSSGRSATML
                     HYALGNPLVRSLTLASRSFFDQPPDGFTDVPLGRTMPVLVHAREDEMAALDDLDSAIA
                     PFASLDRIGEEQMLALCPVLKVGRGGAVAGIVDRNGLRLDPHALLQGYSRVLRRNGGT
                     LAMSARAAAISRSDNGWQVQSERGGRFSAPVLVNAAGSWADKVAQMAGVAPMRIEPKR
                     RTIITFDGPDGTDLSSWPFAKTVGDELYFAPESGRLFASPMDEVPSEPCDCQPGDLEV
                     ALAAHRVEERTTLHVRRIVHKWAGLRTFSPDRKPVAGFAADADGFFWLAGQGGFGLQT
                     SPTMAAVAASLIAGTPWPLADVSAEELGPGRFDRTSA"
     gene            complement(4078..4509)
                     /locus_tag="VHN55_05655"
     CDS             complement(4078..4509)
                     /locus_tag="VHN55_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HEX2803452.1"
                     /translation="MLTQASGIVEIRAPAPGLHEITGEVARWLDSQRIGDGLLTLFCA
                     HTSASLLIQENAAHAARHDLERFFDRIAPEDPSLYTHNDEGPDDMPAHIRSALTQTQL
                     SIPVQGGTMALGTWQGIFLFEHRRDPPARRIALHLIGEQLA"
     gene            complement(4843..7125)
                     /locus_tag="VHN55_05660"
     CDS             complement(4843..7125)
                     /locus_tag="VHN55_05660"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX2803453.1"
                     /translation="MRKSDQKRPEPKPWRTLLWIAIAGLIFGGLGLGEIGEDVLRTTR
                     NSLHWHKASGDIVIVKIDNESLRKAGRWPWPRRVHADLVDKLTQAGSHRIFFDLQFFS
                     ATAADEDAAFGDAIRRSGRIVLGVGSSLGPQAQPDQPPLESLAKEAKLGAISVNHNYQ
                     NAVWRLPYSVESDDGPLPSFASLLAGRSGQVGSTFMVDYSIDPETIPTVSAAAILDGR
                     FDPRLLRDKDVLIGSTSNLLGDTYFIPGFRQAGGVYVHAIGAETLKSGVPITLGWIPL
                     YLAGLGLACFVLLRRNDRHLLLPVGVALVAILIGPIALESRLIYVDVTPALFVVLVTG
                     GILIRTRFRKRGLVDSTSGLPNLTALKSNRAARNKALIVARVLNYAEIAATLPTSSER
                     QLVEQIITRLTVGARDRTIYQGDDGIFAWFDEPGQPFGHHLEALHALFRTPVRVGGMS
                     IDLATSFGVEIGSGRSLANRLGSALVAAEQAGHDGLKWKYHDPESLEDASWKLSILSQ
                     LDEAVDRDEVWVAYQPKVDLKTRRIIGAEALARWTHPEKGPIAATEFVAAAEQHGRIG
                     KLTAFMLDRAIAAAASLNSGGRDFDMSVNLSGRLLSDKALVGRIAILLERHGLDPRHL
                     TLELTETAALAGSGEALDMLTQLRDLGVNISIDDYGTGLSTLDYLKRIPAGEIKIDQS
                     FVRDMVENRSERLMVSSTIALAHSLGRRVVAEGVETREGLELLAEMECDVAQGFITGR
                     PMSLESLRRRLSSERRQKVA"
     gene            7389..7679
                     /locus_tag="VHN55_05665"
     CDS             7389..7679
                     /locus_tag="VHN55_05665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006833497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HEX2803454.1"
                     /translation="MDFISILSIFVLACFVGYYVVWSVTPALHTPLMSVTNAISSVIV
                     VGALIAAAAAGSASAKWLGLVAVALASVNIFGGFAVTARMLAMYKKKERKDA"
     gene            7672..9111
                     /locus_tag="VHN55_05670"
     CDS             7672..9111
                     /locus_tag="VHN55_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX2803455.1"
                     /translation="MPEAVHAQPAWVLLAYLIAGICFILALRGLSSPESSRRGNRAGM
                     LGMAIAVATTLAIHEIASLPEIVGAMLIGGGIGLITARKIQMTAMPQLVAAFHSLVGM
                     AAVLVGAAAYLNPEAFGIAVRITPIAAPSFVSILPVSRIEMGLGVAIGAITFSGSVIA
                     FLKLNGNMSGKPILLPARHVINLGTLVAILGLIAYFMRDQDPWVFFTIMGLSFAIGFL
                     LIIPIGGADMPVVISMLNSYSGWAAAAMGFTLHNSAMIITGALVGSSGAILSYIMCRA
                     MNRSFISVIAGGFGTDSGAGADTQAIDRPWKRGSAEDAAFLMSQADQVIIVPGYGMAV
                     SQAQHALREMADKLKEAGVRVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINS
                     EFARADVAFVIGANDVTNPAAKTDKSSPIYGMPVLDVEKARTVLFVKRSMGGVGYAGV
                     DNELFYRDNTMMLLSDAKKMVEEIVKSLD"
BASE COUNT         1568 a         2863 c         3039 g         1657 t
ORIGIN      
        1 gcagggcgcg cagatcgtcc gagtccacga cgtcccggaa acagtgcagg cgctcaaaat
       61 ctggcgcggc ctccgcgacc aggcgctgac tccgcgtctc taggccgcgt tggtgtcgat
      121 gccgatgtcg gcgagcttgc ggtagagggt ggagcggccg atcccgagcc gcttggccac
      181 ctcggtcatc cgaccgcgat aatggccgat ggcgagtcgg atcaggtcgg cctcgatctc
      241 gtcgagcggg cgaacgtggc cttcttcgtc gaacacggtg atcgcgccca tgccgttgac
      301 ggctgcgtcg ctggactgct tcgtcatgcg cggaatgaag tccgtcgccc gcgcgttgaa
      361 ttgcgactgg gtgacgatat gcgggaaatg ctcggctgtc agcgagctgg aatcgcactt
      421 cagcccggcg cgcagaagca cgccggcgag ctgtcggaca ttgcccggcc agccgtagcg
      481 catcagcacc gtcagcgcgc cattgtcgat ggtcagcggc ttgatcagct tttgctcggc
      541 aaagcgcgcc agcaggtgcc gagtgagcgc gggaatgtcg ctgcttcgct cccttagcgg
      601 cggaagcgtg acgaccgtgc cctccagcct ctcccgaagc tggggattgt aagtatcgtc
      661 cagcggccgg cccgaggtcg cgatcaatcg cacgtcgacc gagtggctgc cgttgcagcc
      721 gaccgggcgc acctcgccgg tcgccagcgc gcggtcgagc gcttcctgcg tggtagcggg
      781 aagggcggta atgtcgtcga gcagcaaggt ccccgaatta gcttcgacca gcttgccgtc
      841 cttggcggag aaagcgcctg ggaaggcgcc cgcctcatgg ccgaacaatt cgctgtcgat
      901 gatgttcgcc gccaccgcct tgcaatcgag cgagacgagc ggcgctttcg agcgcaggct
      961 agcgtcgtgg atggcgcgcg cgaatgcttc cttccccgtt ccgggctcgc cgacgatcag
     1021 gatcggaagc cggttcctgg cggccttggc agcgaccgcg agcgacgagc ggaactcggg
     1081 agttgctccg acgagctggt ccagcgagag cggcggcgcc agcttctcgg cgatcggtgt
     1141 gagctcgccc gtcggccgcc ggcggtccgc tgcggctgaa agcgcttcca ggagccgttc
     1201 gggagcgacc ggccgcccca ggaagtcggt ggcgccggcg cgaatggcgt cgaccgcccg
     1261 cggaagtgcg tcttcctgcg ccagcaccag cacgggaagg cccgggtggc acgagcgaag
     1321 gccgtcgatc atcggcccgg ctccgtccgc gtcccaattg ccgaggagcg cgaccctgac
     1381 ctccgggcca tagggcccgc gaaggatcgc gaccgcggtc tccagcccgt cggctccaac
     1441 caccgtccag cccgaacggg aggcgatggc cgagattcgc cgccgttcgg cggggtcggc
     1501 atcgaccagg agcagcgatc ggatcggttc gtttggcatg gtgtacctcg ctctcgccgg
     1561 tgtaagcaca agcggtaaag gggggcttaa aggcgcgctt tgcctcttgg gccggaggga
     1621 gcgggttgtt atgcactccg ccacgaaaca atggggagcc atatggcgca cgacgaagag
     1681 ccgatcctga ccaacccgcc gacccaggag gtcgcgcgcc acgtgaacga ttattcgcgc
     1741 ttcaccgcgc ttctgaagtg gggcgcgatc gtctcgctga tcgtcgcctt catcgtgctc
     1801 atgctcatca gctagtgaag atcgcggtcc tcaaggaaac cgctcccggc gaaactcgct
     1861 gcgccgcaat tccggagacg gtgaagaaat tcgccgcgct gggggccgag gttgcggtcg
     1921 agaagggggc cggagcggac gcgggagtgc ccgactccgc gtttaaggag gcgggcgccg
     1981 caatcggcag ccgaaaggac gtgcttgccg gcgccggcat catcctgtgc atcaacggtc
     2041 cggatcccga cgctctcggc ggcgcaccca agggcgcgct ccttgtcggc gccctcgatc
     2101 cgcttcgccg tggcgatgcc gtcaaggcct atgcaaaggc cggtttgcag gcgctggcga
     2161 tggaatggat gccgcggatc acccgcgccc agtcgatgga cgtcctctcg tcgcagtcga
     2221 acctcgccgg ctacaaggca gtcgtcgacg ccgcctccgc ctatggtcgt gctttcccga
     2281 tgatgatgac ggccgcgggc acggtcagcc cggccaaggt gttcgtgatg ggcgtcggag
     2341 tcgccggcct gcaggcgatc gccacggcca agcgcctcgg cgcccaggtc agcgcaaccg
     2401 acgtgcgctc ggcgaccaaa gaacagatcc agtcgctcgg ggccaagccc attttcgtcg
     2461 agaaggtctc gggaatcgaa ggcgaaggcg ccggaggcta cgcgaccgag atgtccgacg
     2521 agtatcgtaa ggcacaggcg gagctggtct caagccatat cgccaagcag gacatcgtca
     2581 tcaccaccgc gctgatcccc ggcaagccgg cgcctcggct gatcagcgac gcgcagatcg
     2641 caaccatgcg gcccggcggg gtcatcgtcg atctcgcgac cgaggcagga ggcaatgtcg
     2701 acgggacggt ggcgggcaag acggtcgaga agcacggcgt gacgatcatc ggtgcatcca
     2761 acctggcccg cagcctgccg gccgacgcgt ccgcgctttt cgctcgcaat ttgtataatt
     2821 tcctcagtgc gttttgggac aaggataaga acgcacctga gcttcccgac gacgacgaaa
     2881 tcgtggccgc cattcgcctg acccgcgacg gcaaggtggt cagcgaaagg ctggcggagg
     2941 cctgatcacg gccgatacgg cggacattct tgtaatcggc ggcggagtcg ccggcctgtc
     3001 tgcggcagcg gcgctaagcg agcatgccag ggtgacggtt ctcgaagccg aggagtcgat
     3061 cggctatcat tcgtccgggc gaagcgcgac gatgctccat tatgcgctcg gcaatcccct
     3121 ggtccggtcc ctgaccctcg ccagccgctc ctttttcgac cagcctccgg acggctttac
     3181 ggacgtgccg ctcggccgga ccatgccggt gctcgtccac gcgcgggagg acgagatggc
     3241 ggcgctcgac gatctcgact ccgcgatcgc gcccttcgcg agcctcgacc gcatcggcga
     3301 agagcaaatg ctggcgctgt gcccggttct caaggtcggc cggggcggcg cagtcgccgg
     3361 gatcgtcgat cgcaacggcc tcaggctcga cccgcacgcg ctcctccagg gatattcgcg
     3421 cgttctccga cgcaatggcg ggacgctcgc gatgtccgca cgggccgccg cgatctcccg
     3481 ttccgacaat ggctggcagg tgcaaagcga gcgcggcggc cgcttctcgg cgcccgtttt
     3541 ggtcaatgcc gccggctcct gggccgacaa ggtcgcgcaa atggcgggcg tcgcgccgat
     3601 gcggatcgag ccgaagcgtc gaacgatcat taccttcgac ggtcccgatg ggacggacct
     3661 gagctcgtgg ccattcgcca agacggtcgg tgacgagctc tatttcgcgc ccgagtcggg
     3721 ccgcctgttc gcctccccga tggacgaggt cccgagcgag ccgtgcgact gccagcccgg
     3781 cgatctcgag gtcgccctcg cggcccaccg ggtcgaggag cggacgacgc tccacgtgcg
     3841 gcggatcgtc cacaaatggg ccggacttcg caccttctct ccggaccgaa agccggtggc
     3901 cggtttcgcg gcggatgccg acggcttctt ctggctggcc gggcaggggg gcttcgggct
     3961 ccagacctcg ccgacgatgg ctgcagtggc ggcttcgctg attgcgggca ctccctggcc
     4021 gctcgcggat gtttcagcgg aggagctggg ccccggccgt ttcgaccgca catccgctta
     4081 ggcgagttgc tccccgatca ggtgaagcgc gattcgcctc gcgggcgggt cacggcgatg
     4141 ctcgaacagg aaaatgccct gccaggtgcc gagcgccatc gtcccgccct gcaccgggat
     4201 cgacagctga gtctgggtca gcgcgcttcg aatgtgcgcc ggcatgtcgt ccggcccctc
     4261 gtcattgtgc gtgtagagcg acggatcttc gggcgcgatt cgatcgaaaa accgctcaag
     4321 gtcgtgccgc gcagcgtggg ccgcattctc ctggatcagg agcgatgccg acgtgtgggc
     4381 gcagaacagg gttaatagcc cgtccccgat tcgctgcgag tcgagccagc gcgcgacctc
     4441 gccagtgatc tcgtggaggc cgggcgccgg tgcgcggatt tcaacgattc cgcttgcttg
     4501 tgtgagcatg caatgccttc aactacaggc gaggtaacgc gttcgacgcg cacgaaaagc
     4561 gcctgcaaaa gcaggcgctt acgctcacaa tggtgaaatc gatctggcgt tagccggagg
     4621 cgccggcggt gcttccgccg ctaccgagga tccaactcca gaagctccaa cgagccggta
     4681 gattcttctt catgggtttc ccccgttgtc gaacactgcg attcggcagc tgggaggata
     4741 ttaaccttac cgaagaaggt tagcaaactg tttaccaaaa cgactgtggc cggcgtggag
     4801 ggacaccgcg tcaaatcggc acagtcgtga aagaattggt ggctacgcga ccttctggcg
     4861 gcgttccgag gagaggcggc ggcgaaggct ttccaggctc atcgggcggc cggtgatgaa
     4921 gccctgggcg acgtcgcatt ccatctcggc gaggagctcc aggccttcac gggtctcgac
     4981 gccttcggcg acgacccgtc ggccgagcga atgggccagt gcgatcgtcg aactgaccat
     5041 caggcgttcg ctgcggtttt cgaccatgtc ccgcacgaaa ctctggtcga tcttgatctc
     5101 gccggcaggg atccgcttca ggtagtcgag tgtcgacagg ccggttccat agtcgtcgat
     5161 ggagatgttc actccaaggt cgcgaagctg ggtgagcatg tccagcgctt cgccgctgcc
     5221 ggcgagggcc gcggtttccg tcagctcgag cgtcaagtgg cgagggtcga gaccgtggcg
     5281 ttcaaggagg atcgcgatcc ggccgacaag cgccttgtcg ctgagaagcc ggccggacaa
     5341 gttgaccgac atatcgaagt cccggccgcc actgttaaga gaggcggctg ccgcgatggc
     5401 cctgtcgagc atgaacgcgg tgagtttccc gattcggcca tgttgctcgg cggcagcgac
     5461 gaactcggtc gcggcgatcg gccctttttc cggatgggtc cagcgcgcca gcgcttccgc
     5521 accgatgatc cgccgggtct tgaggtcgac cttcggctga taggcgaccc aaacctcgtc
     5581 gcgatcgacc gcttcgtcca gctggctcag gatcgacagc ttccaggatg cgtcctccag
     5641 cgattcgggg tcgtggtact tccacttcag cccgtcgtgt ccggcctgct ccgctgcgac
     5701 cagcgcgctt cccaggcgat tggcgagcga gcggccgcta ccgatttcga ctccaaagct
     5761 ggtggccagg tcgatcgaca tgccgccgac ccggaccggc gtcctgaaca gcgcatggag
     5821 cgcttcgaga tggtggccga agggctgccc gggttcgtcg aaccaggcaa aaatcccgtc
     5881 gtcgccctgg tagattgtgc gatcgcgggc tccaacggtc aggcgagtga tgatttgctc
     5941 cactagttgg cgctcggaag aagtggggag cgtggccgcg atttcggcgt aattgagcac
     6001 cctggcgacg atgagcgcct tgtttcgagc ggcccggttc gatttcagtg cggtcaagtt
     6061 cggaagcccg gaggtcgaat cgaccagtcc ccgctttcgg aaacgcgtac ggattagaat
     6121 tccgccggtt acgagcacga cgaacaatgc gggcgtgaca tcgacgtaga tcagccggct
     6181 ctcgagagcg atgggtccga tcaggatggc aaccagtgca acgcctacag gaagcagcag
     6241 gtggcgatca ttacgccgca gcaggacgaa gcaggcgagt cccaggcccg cgagatagag
     6301 gggaatccac ccgagcgtga tcggaactcc ggatttcaaa gtctcggcgc cgatcgcgtg
     6361 gacatagacg ccccctgcct ggcggaagcc ggggatgaag taggtgtcgc cgagcaggtt
     6421 gctcgtgctt ccgatcagga cgtctttgtc gcgaagcagg cgaggatcga aacgaccgtc
     6481 gagtatcgca gccgccgaca ccgtcggaat tgtctccgga tcgattgaat aatcgaccat
     6541 gaaggtgctt ccgacctgtc ccgagcggcc cgccagaagc gacgcgaaac tgggaagcgg
     6601 gccatcgtcg gattccacgc tgtaggggag ccgccagaca gcgttctggt aattgtgatt
     6661 gaccgatatc gcgccgagct ttgcctcttt ggcaagcgac tccagcggag gctggtccgg
     6721 ctgcgcttga gggcccagcg agctgccaac gcccaggact atgcggcccg agcggcggat
     6781 agcatctcca aacgctgcgt cttcgtcggc cgctgttgct gagaagaact gaaggtcgaa
     6841 gaagatgcgg tgcgagccgg cctgggtgag cttgtccacg agatctgcat ggactcgcct
     6901 cggccagggc cacctcccgg cctttcgaag cgattcgttg tcgatcttga cgatgacgat
     6961 gtcgccgctc gctttgtgcc agtgcaggct gttgcgggtc gtccgaagga cgtcctctcc
     7021 gatttcgccg agcccgaggc cgccgaaaat caggcccgcg atggcgatcc acagcagggt
     7081 tcgccatggc ttcggctcag gccgcttttg gtcggatttg cgcacgacca cgcgtatgtg
     7141 cgcgcaaagg ttaggaaatc ggaaactcta ttccggtgaa cggcggaaat tcgtccgctt
     7201 attgcctctg tcctacagtc gttcatttgt gccagagtgg tcgtgatgat tggtgacggt
     7261 gggtcgtttc gtcaaatgtc ggttctgctg ccgcgcggtg cgcggtgggt tgccgcttcg
     7321 cttaacgtca cggaaatggt cgctgatcgc gtgactttag tgactttaag ccggatggaa
     7381 gggcgctgat ggacttcatc tcgatcctgt cgattttcgt gctggcctgt ttcgtcggct
     7441 attacgtggt gtggtcggtg acccctgcgc ttcacacgcc gctgatgagc gtcaccaacg
     7501 ccatttcctc ggtgatcgtc gtcggcgcgc tgattgcggc cgcagcggcg ggaagcgcct
     7561 ccgccaaatg gctcgggctg gtcgcggtcg cgcttgcgag cgtcaacatc ttcggcggct
     7621 tcgcggtcac ggcgcgaatg ctcgcgatgt acaagaagaa ggagcgcaag gatgcctgag
     7681 gcggtgcatg cgcaacccgc ctgggtgctc ctcgcttacc tgattgccgg aatctgcttc
     7741 atcctcgcgc ttcgggggct gtcgagcccc gagagcagcc gccggggaaa tcgcgccgga
     7801 atgctcggaa tggcgattgc cgtcgccacg acccttgcca ttcacgagat cgcttcgctt
     7861 ccggagatcg tcggcgcgat gcttatcggc ggcgggatcg gcctgattac cgcgcgcaag
     7921 atccagatga cggcgatgcc gcaactggtc gccgcatttc acagcctggt gggtatggcc
     7981 gcggtcctcg ttggcgcagc tgcttacctt aacccggaag ccttcgggat tgccgtccga
     8041 atcacgccga tcgccgctcc atcgttcgtc agcatcctgc ccgtcagccg gatcgagatg
     8101 gggctgggag tcgccatcgg cgcgatcact ttctcgggct cggtgattgc cttcctcaag
     8161 ctcaacggca acatgtcggg caagccgatc ctcctgccgg cgcggcacgt catcaatctc
     8221 ggcacactcg tcgcgatcct cggtctcatc gcttatttca tgagggatca ggacccctgg
     8281 gtcttcttca cgattatggg cctgagcttc gcgatcggct tcctgctgat catccccatc
     8341 ggcggcgcgg acatgccggt cgtgatctcc atgctgaaca gctattcggg ctgggccgcg
     8401 gcggcgatgg gcttcacgct ccacaacagc gcgatgatca tcaccggcgc tctggtcgga
     8461 agttcaggcg cgatcctcag ctacatcatg tgccgggcaa tgaaccgcag cttcatctcg
     8521 gtcatcgccg gcggcttcgg caccgactcc ggtgcagggg ctgacacgca ggcaatagac
     8581 cgcccctgga agcgcggctc ggccgaggac gcggccttcc tgatgagcca ggccgaccag
     8641 gtgatcatcg tccccggcta cgggatggcg gtcagccagg cgcagcacgc gcttcgcgag
     8701 atggctgaca agctcaagga ggccggggtc cgcgtcaaat atgcgatcca ccccgtcgcg
     8761 gggcggatgc cgggccacat gaacgtgctg ctcgccgaag ccaatgttcc atacgacgag
     8821 gtgttcgagc tcgaggacat caattccgaa ttcgcccgcg ccgacgtcgc tttcgtcatc
     8881 ggcgccaacg acgtcaccaa ccccgccgcg aagaccgaca agagctcgcc gatctacggc
     8941 atgccggtgc tggacgtgga gaaggcgcgc acggtgctgt tcgtgaaaag gtcgatgggc
     9001 ggggtcggct atgccggagt cgacaacgag ctcttctatc gcgacaacac gatgatgctt
     9061 ctgtcagatg cgaagaaaat ggtggaagag attgtaaagt ctctggatta gtttcgtggg
     9121 aggtgga
//
LOCUS       DATAKH010000141        11233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_18285,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000141 DATAKH010000000
VERSION     DATAKH010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11233
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18285"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1512
                     /locus_tag="VHN55_05675"
     CDS             <1..1512
                     /locus_tag="VHN55_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019053391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX2803456.1"
                     /translation="DAAKLAGPAIEAVKGGKIRVVPETWKKTWFNWLENIQPWCVSRQ
                     LWWGHRIPAWYAEDGHVFVAETEEGAKAQAAGKPLRQDEDVLDTWFSSALWPFATLGW
                     PEQTEELKRHYPNDVLISGFDILFFWDARMAMQGIEFMGEVPWKTLYLHGLVRDAHGQ
                     KMSKSKGNTVDPLGLIDKYGADALRFTMAAMESQGRDIKLDEKRVEGYRNFATKLWNA
                     ARFLQMNGVGGSDSIAAPKAELPVNRWIIGEVVDTLAKLNRAFDELRFDDMANAIYHF
                     TWATYCDWYVELIKGAFDDETKRVAAWAFDQILVMLHPLMPFITEELWNAMGERPYEL
                     IVAKWPEPEAAVDTAAKAEVEWLIELVSEVRTLRAELNIPWSATLEPLVLGAGTTADR
                     INAAQATVTRLAKLGAASPAQSAPAGSAQVVVNGETIAFPLAGHIDLDAEKSRLAKAA
                     EAAEKERDSLAARLANANFVERAKPEAVEKARSDHAEKSAEADRYRAALERLG"
     gene            complement(1515..2375)
                     /locus_tag="VHN55_05680"
     CDS             complement(1515..2375)
                     /locus_tag="VHN55_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010335894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0001727 - lipid kinase activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YegS/Rv2252/BmrU family lipid kinase"
                     /protein_id="HEX2803457.1"
                     /translation="MIVNAKSRQGAESFDQAVDLLGRAGVELIDARPVKNPKRMAQEV
                     KEAIDRAPMVIVGGGDGTLSSTIDFFKGKKTVFAVLPLGTANSFARAAGLPLDIQGAV
                     DVIANGRQRQIDLGCINGDYFGNSAAIGLSPLIAKTVPPRLKKVLGRLGYALWAAKVG
                     IRFRPFRLTIAGDDSSATVWATEVRIANGGFFGGVELVEEAELDSGEIIVQVVTGKTS
                     RSLAKNWISNMLKLRDRDEWQAEIRARRVRLETDPVMDVTIDGELATRTPLEVSIAPK
                     AVAIAAPKPR"
     gene            complement(2451..2891)
                     /locus_tag="VHN55_05685"
     CDS             complement(2451..2891)
                     /locus_tag="VHN55_05685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803458.1"
                     /translation="MSVRRITALLPALSILVCGCTPIVLGSPSPVLYLTGQEAYSANG
                     KNWIRYKYDVMNKDQYPAALFAAAPTLPPCGLNTNSSRSWVEFYDKDNQPIYGFCALG
                     DPADLGKIWFAYEEGVVPPSWVYIEITDRETNTIYRSNISDSVM"
     gene            3017..4012
                     /gene="hemB"
                     /locus_tag="VHN55_05690"
     CDS             3017..4012
                     /gene="hemB"
                     /locus_tag="VHN55_05690"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEX2803459.1"
                     /translation="MSRPSFPAIRMRRGRSTPWIRAMLAENRLHPSDLIWPLFVCAGE
                     GCEEPVASLPGVSRWSVDRLADRAREAARLGIPCVALFPNTPGDRRTDDAREALNADN
                     LICRAIKAIKDSVPEIGVLTDVALDPYTGHGHDGLVDERGCVVNDDTVKVLVEQALVQ
                     CGAGADIVAPSDMMDGRVGAIRSALEDAGHCDTAIMAYAAKYASAFYGPFREAVGSQG
                     RLKGDKRGYQMDPANSDEALREVALDLAEGADFVMVKPGLPYLDVVQRVRDTFRVPTF
                     AYQVSGEYAMIEHAAAAGAGDRDSLILETLLAFKRAGAAGVLTYHALDAARLIGR"
     gene            complement(4009..4503)
                     /locus_tag="VHN55_05695"
     CDS             complement(4009..4503)
                     /locus_tag="VHN55_05695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803460.1"
                     /translation="MRALPFLPLLAVAACAAPTNAPSLAPRAAETIDPRLPVPEPVLA
                     AAPSPELVRQLESLVSEAVAGDAEFRPLAERARNLAEQAGPNESESWVVAQQVLSAAI
                     AVRGRVTRAVADVDALGGDRIERLGGIGAADMKAIRAAADRISEIDRRGAAAIAQVQE
                     RLAR"
     gene            complement(4549..4625)
                     /locus_tag="VHN55_05700"
     tRNA            complement(4549..4625)
                     /locus_tag="VHN55_05700"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4589..4591),aa:Arg,seq:acg)
     gene            complement(4746..4901)
                     /locus_tag="VHN55_05705"
     CDS             complement(4746..4901)
                     /locus_tag="VHN55_05705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803461.1"
                     /translation="MESDQRYYRRRAYEERMAAQRAITEAARSWHSKLAQDFAERASI
                     GNTTAVA"
     gene            5089..5340
                     /locus_tag="VHN55_05710"
     CDS             5089..5340
                     /locus_tag="VHN55_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803462.1"
                     /translation="MLSSTHTGRGQYDPNARGYHAAYREGEVNHCPGCGRSHWIIGRL
                     SAECAFCSTALPLTEAHRQGQNATVTCRSWPVYPTLDAA"
     gene            5388..5744
                     /locus_tag="VHN55_05715"
     CDS             5388..5744
                     /locus_tag="VHN55_05715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803463.1"
                     /translation="MTRTIALAAAALVCATPIPALAQATSFAIVNNTDIDFTGLKVRR
                     FGTSEWLPLVVAPIPVARSGGRGSVDFNNPDCAFDLQATLPDGRMVVWSGVNLCEAKV
                     VTLNRSASGDLWVDYR"
     gene            complement(6106..7356)
                     /locus_tag="VHN55_05720"
     CDS             complement(6106..7356)
                     /locus_tag="VHN55_05720"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HEX2803464.1"
                     /translation="MMLTEINFDGIVGPSHNYAGLSLGNLASTRNVGHVSKPRAAALQ
                     GIDKMRANLRLGLAQGLFVPHPRPNRDWLAALGTRVEEAEPRIAANAMSASAMWAANA
                     ATVSPAPDCADGKCHLTVANLRTMAHRSHEWPATLAQLRLAFSGPAFAVHAPVPCAFG
                     DEGAANHMRLAGDYGEPGVELFVYGVSGGAFPARQHLEASKAIARLHKLDPERTLFVE
                     QSEEVIAAGAFHNDVVAVANRRVLFAHEKAFAERGRVLGECERLFPQMELVEVADSDV
                     SITDAVSSYLFNAQLVSPPGGETTLIVPAEARETPSVWAWLERHLAGNGPIRKVEVVD
                     VRESMANGGGPACLRLRVAADPATVDPRFLADEAKLDRIAEVVESTWPSEIHADELQL
                     PELVSAVESARTALLDLLDLRELA"
     gene            complement(7353..8369)
                     /locus_tag="VHN55_05725"
     CDS             complement(7353..8369)
                     /locus_tag="VHN55_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HEX2803465.1"
                     /translation="MSFRVRPARPEDYQDIYKMAKLTGGGFTNLPPDKATLVRKLERS
                     AESFDRQGDEQRGDLYVFVLEDPKSRKIRGTCQVFGQVGCEQPFYSYHMSTLTQSSPE
                     LGKTFRNHMLTLTTDLEGASEVGGLFLHPESRAGGFGALLARSRYLFIKAHRQRFGDR
                     VLAELRGVMDEAGNAPFWDALAGKFFGMTFPEADDFNAVHGTKFIADLMPRTPIYVAL
                     LPESAKSVMGQPHPSGRAALKMLESEGFVFDRYIDIFDGGPTVIAQTDQIRTIRESCL
                     ETIGSVGQGGKHKMLVAAGRLGDFRACCTAAGRDSDDRLLIDKDAAELLEIGEGDQVL
                     AVAR"
     gene            complement(8366..9574)
                     /locus_tag="VHN55_05730"
     CDS             complement(8366..9574)
                     /locus_tag="VHN55_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HEX2803466.1"
                     /translation="MPALSAIENAVVERASAEPMLDQVLEWSALNSGSRNLPGLERMA
                     AVLADAFAVLPGELELLDSEPVESVDSSGRTNALEHGQNLHLTVRADAPVQLLFTGHM
                     DTVFPVDHAFQQTRWLDDGTLNGPGVADMKGGLAVMLAALKAIEASDVAGKLGYEIVV
                     NSDEEVGSLGSAALLARAAQGKTAALTYEPSALPDGTLAGARPGSGNYSLVVRGRSAH
                     AGRNPEEGRNALLAAADLALRLDSLKRDGLSVNPARIDGGSPSNVVPDMAVLRVNMRP
                     RTPELEAEAERAVEELVAAVAAEREVTIEAHGGFGRPPKPMTEDMERLFALVKASGSD
                     LGQDIGWKSTGGVCDGNNIAACGVPVVDTMGVRGGKIHSMEEYLITGSLGERAALSAL
                     TVLRIAEGRL"
     gene            9664..10446
                     /locus_tag="VHN55_05735"
     CDS             9664..10446
                     /locus_tag="VHN55_05735"
                     /inference="COORDINATES: protein motif:HMM:NF018352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MipA/OmpV family protein"
                     /protein_id="HEX2803467.1"
                     /translation="MKPNELILAAAAILVPATEASAQVVGDYRVRVGIGAQVRPEFPG
                     AEDSEVAPYPSFSFAKGDKPFSLGAPDDSLGIGLISSGGFSAGPAVALMSSRQNSDVG
                     APVGKVPWTFEAGAFVQQQIGDSFRLRGEVRRGIGGHGGWVGHIGADYMARDADKWTF
                     TIGPRVRFANGRYMREYFGVTPEAALATGLPTYRPDGGVKAVGMASGATYSLGGPLGL
                     FSYVRYDRLVGDAKRSPIIRQFGSRNQWSAGVGLSYVFNLKI"
     gene            complement(10443..10922)
                     /locus_tag="VHN55_05740"
     CDS             complement(10443..10922)
                     /locus_tag="VHN55_05740"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEX2803468.1"
                     /translation="MSDDGHLYRLGVGVMLLNREGKVFVGARVDNPEDAWQMPQGGID
                     ADEEPWPAALRELEEETGIAPQLVELVAECSERLRYDLPEEWRTRLWGGKWRGQEQHW
                     FLARFLGSDGDIDLNAHEPEFRDWKWVDPGEVPELIVPFKRDLYRRLLDDFADYLER"
     gene            11016..>11233
                     /locus_tag="VHN55_05745"
     CDS             11016..>11233
                     /locus_tag="VHN55_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803469.1"
                     /translation="MLYYIGIMIGASFLAFAAWLIVFRDQQRTRLIVTSIWLFAVPIT
                     LLVLDNYLVGLLWSLPLLAIIALEEALKL"
BASE COUNT         1899 a         3757 c         3629 g         1948 t
ORIGIN      
        1 gacgccgcga agctcgccgg ccccgccatc gaggcggtga agggcggcaa gatcagggtc
       61 gtcccggaaa cgtggaagaa gacctggttc aactggctcg agaacatcca gccctggtgc
      121 gtgtcgcgcc agctctggtg ggggcaccga atcccggcct ggtatgcaga agacgggcat
      181 gtcttcgtcg cggaaaccga ggaaggggcg aaggcgcagg ctgccggcaa gcccctgcgc
      241 caagacgagg acgttctcga cacctggttc tcgtcagccc tgtggccatt cgccacgctc
      301 ggctggcccg agcaaaccga ggagctgaag cgccactacc ccaacgacgt gctcatctcc
      361 ggcttcgaca tcctgttctt ctgggatgcg cggatggcga tgcagggcat cgagttcatg
      421 ggcgaggtgc cgtggaagac gctctacctg cacggcctgg tccgcgacgc gcacgggcag
      481 aagatgtcca agtcgaaggg caataccgtc gacccgctcg gcctcatcga caaatatggc
      541 gccgacgcgc ttcgcttcac catggcggcg atggaaagcc agggccgcga catcaagctc
      601 gatgagaagc gcgtcgaagg ctaccgcaac ttcgcgacca agctgtggaa cgccgcgcgc
      661 ttcctgcaga tgaacggagt cggcggatcg gacagcatcg ccgcgccaaa ggctgagctc
      721 ccggtcaacc gctggatcat cggtgaagtt gtcgacacgc tcgccaagct gaatcgcgcc
      781 ttcgacgagc tccgcttcga cgacatggcc aacgccatct accacttcac ctgggccacc
      841 tactgcgact ggtatgtcga gctgatcaag ggcgcgttcg acgacgagac caagcgcgtc
      901 gcagcctggg cgttcgacca gatcctggtg atgctccacc cgctgatgcc cttcatcacc
      961 gaggagctgt ggaacgcgat gggcgagcgg ccctacgagc tgatcgtcgc caagtggccg
     1021 gagccggagg ccgcggtgga caccgccgcc aaggccgagg tcgaatggct aatcgagctg
     1081 gtttcggaag tccggacgct tcgcgctgag ctcaacattc cgtggagcgc gacgctggag
     1141 ccgctggtgc ttggcgccgg cacgactgcc gatcgcatca acgcggcgca ggcgacggtg
     1201 actcgattgg ccaagctcgg cgccgcgtcg cccgcgcaat ccgctccggc cggctcggca
     1261 caggtcgtcg tcaacggcga aaccatcgcc tttccgcttg ccggccacat cgacctcgac
     1321 gcggagaagt cccgcctcgc caaggctgcc gaagccgccg agaaagagcg cgacagtctc
     1381 gctgcccgcc tcgccaacgc caatttcgtc gagcgcgcca agcccgaagc ggtcgaaaag
     1441 gcccgctccg accacgccga gaaatccgcc gaggccgatc gttacagggc cgcgctggag
     1501 cgcctgggct gacgctagcg cggcttgggc gccgcgatcg ccaccgcctt cggcgctatc
     1561 gacacttcca gcggagttct cgtcgccagc tctccgtcga tggtgacgtc catcaccgga
     1621 tcggtctcca gccggactcg cctggcccgg atctcggcct gccattcgtc gcggtcgcgc
     1681 agcttgagca tgttcgaaat ccagttcttg gcgaggcttc gcgaggtctt tccggtgacc
     1741 acctggacga tgatttcgcc gctatcgagc tcggcttcct cgaccagctc gacacccccg
     1801 aaaaagccgc cattcgcgat cctgacctcg gtcgcccaga cagtggctga gctgtcgtcg
     1861 ccggcgatcg tcagccggaa cggccggaac cgaattccga ccttggccgc ccacaaggcg
     1921 tagccgagac ggccgagcac cttcttcagc ctcggaggca cggtcttggc gatcagcggc
     1981 gacagcccga tggcagcgga attgccgaaa taatcgccgt tgatgcagcc gaggtcgatt
     2041 tgcctctgcc gtccattggc aatgacgtcg acggcaccct ggatgtccag cggaaggcca
     2101 gccgctcgcg caaagctgtt cgcggtgccg agcggaagga cggcgaacac cgtcttcttc
     2161 cctttgaaaa aatcgatcgt cgaggacaat gtcccgtcgc cgccgccgac gatcaccatc
     2221 ggcgcccggt cgatcgcttc cttcacttcc tgcgccattc gcttcggatt tttcacgggc
     2281 cgcgcatcga ttagctcgac tccggcccgt ccgaggaggt ccaccgcctg gtcgaagctt
     2341 tcggcgccct gccggctctt ggcgttgacg atcaatatcg cctgctttgg tagggcccct
     2401 ctgctcacgg atgctagaat gctccagccg cggcttcttt ccggcggcgg ctacataacc
     2461 gagtcggaga tgttggaccg gtagatcgtg ttggtctccc ggtcggtgat ctcgatatag
     2521 acccagcttg gtggaacgac gccttcttca taggcgaacc agatcttgcc gaggtcagcc
     2581 ggatcgccga gcgcgcaaaa gccgtagatc ggctggttgt ccttgtcata gaattcaacc
     2641 cagcttcgcg acgaattcgt gttgagcccg caaggtggca gggtcggcgc ggcggcgaac
     2701 aaggcggcgg gatattggtc cttgttcatc acgtcatatt tgtagcggat ccagttcttc
     2761 ccgttggcgg aataggcctc ttgcccggtc agatagagca ccgggctcgg cgaccccagg
     2821 acgatcgggg tgcacccgca aaccaggatc gagagcgcag gaagaagagc ggttatgcgt
     2881 cggacagaca ttgcggcgac cccctcaaat agcggcatcg gcacgcgcgg cagaatgtca
     2941 ctgttggctg gcggcgacaa gcgagcgagc tcgggacttg cgtaggggtg aggccgcgct
     3001 acacctccgc gccgcaatgt cgcgccccag cttccctgcc attcgaatgc gacgaggccg
     3061 ctcgaccccg tggattcggg cgatgctggc cgagaaccgg ctccacccga gcgacctcat
     3121 ctggcctctg ttcgtttgcg cgggcgaggg ttgcgaggag cccgtggcgt cgcttcccgg
     3181 ggtcagccgc tggtcggtcg accggcttgc cgaccgcgcc cgcgaggcgg cccggctggg
     3241 aatcccctgc gttgccctgt tcccgaacac accgggcgat cgtcgcacgg acgacgctcg
     3301 cgaggcgctc aacgcggaca atctcatttg ccgggcaatc aaggcgatca aggactcggt
     3361 tccggaaatc ggggtcctga ccgacgtcgc gctcgacccg tacaccggcc acggtcacga
     3421 cggcctcgtc gacgagcgcg gctgcgtggt gaacgacgac accgtcaagg tgctggtcga
     3481 gcaggcgctc gtccagtgcg gcgcgggcgc cgacatcgtt gctccctccg acatgatgga
     3541 cggccgggtg ggcgcgatcc gctccgcgct cgaggatgcg ggccactgcg acaccgcgat
     3601 catggcctac gccgccaaat atgcgtcggc cttctatggc ccgttccgtg aagcggtggg
     3661 cagccagggc cgtttgaagg gcgacaagcg cggctaccag atggatcccg ccaacagcga
     3721 cgaggcgctt cgcgaggttg cgctagacct cgccgagggc gccgacttcg tgatggtgaa
     3781 gccggggctg ccctatctcg acgtggtcca acgcgtacgc gacaccttcc gggtgccgac
     3841 cttcgcctat caggtgtccg gcgaatatgc gatgatcgaa catgccgccg ctgccggggc
     3901 aggggaccgc gactcgctca tcctggaaac cctgctggcc ttcaaacggg ccggcgcggc
     3961 aggagtcctg acctaccatg cgctcgatgc tgcccggctg atcggccgct agcgagccag
     4021 ccgctcctgg acctgtgcga tcgcggctgc tccccgccgg tcgatttcgg agatgcggtc
     4081 ggcggcggcc cggatcgcct tcatgtcggc ggctccgatc ccgcccagcc tttcgatcct
     4141 gtcgccgcca agggcgtcca cgtcggcgac ggcgcgggta acccggcccc gcaccgcgat
     4201 cgccgccgac agcacctgct gggcgaccac ccagctttca ctctcattcg gtcccgcttg
     4261 ctcggccaga ttgcgggcgc gttcggcaag cggccggaac tccgcatcgc cagccacagc
     4321 ctcggaaacg agcgactcga gctgccgaac gagctcaggg ctcggagcgg cggcgaggac
     4381 aggctcaggc accggcaggc gcgggtcgat cgtttccgcc gcccgcggtg caagcgacgg
     4441 cgcgttggtt ggcgcggcgc aggccgcgac cgccagcagc ggcaggaagg gaagggcgcg
     4501 catcgccgct gtctaggaac cgcgctgctg tcgtgcaatc gcgggaaatg gcgcgcccgg
     4561 aaggattcga acctccggcc cccagattcg tagtctggtg ctctatccag ctgagctacg
     4621 ggcgcctgcg tgcatcgaat tgcagcgagc ggcgcacata gggacagcat ccaagcgaag
     4681 caagcctgcg catcggcggc cgcgccgatg ccattgggcg aatgagaaga ggcgagcgcc
     4741 gcgctctaag ctacggcggt tgtgttgcct atcgatgccc gttcggcgaa atcctgcgcg
     4801 agcttgctgt gccacgaacg cgcggcttcg gtgattgccc gctgtgccgc catccgctcc
     4861 tcgtaggcac ggcggcgata gtaacgctgg tccgattcca tctacgcacc ccctggtcca
     4921 caaggcacga tgcgccggaa ggcctaaagg atagttaata tccacagccg tcccgccacg
     4981 gcacagcgct cccttcgcaa gtgacattta cggcggcgag gcagaggctc tctgaaacct
     5041 atcgaatcgc cgctcgtttg agtcgcaaag tattgaaagg aaacacccgt gctcagttcg
     5101 actcacaccg gccgggggca gtacgatccg aatgcgcgcg gctatcatgc cgcgtatcgc
     5161 gagggcgaag tcaaccactg ccccggctgc ggccgaagtc actggatcat cggccgctta
     5221 agcgccgaat gcgcattctg ctcaacagcc ctgccgctga cggaagcgca tcgccaggga
     5281 cagaatgcga cggtgacctg ccgctcgtgg ccggtctacc cgactctcga cgcggcctag
     5341 caccgactcg gtttcgcgct gtccgccctg cggtgtataa ggggcggatg acgcgcacca
     5401 ttgcactcgc ggccgcagcc ctcgtctgcg ccacgcccat tccggcgctg gcccaggcga
     5461 cgagctttgc catcgtcaac aacaccgaca tcgatttcac cggcctcaag gtaaggcggt
     5521 tcgggacttc ggagtggctg ccgctggtgg tcgccccgat cccggtcgcc aggtcaggcg
     5581 gccgcggctc ggtcgatttc aataatccgg attgtgcgtt cgatcttcag gcgacgctgc
     5641 cagacggccg gatggtcgtg tggtcgggcg tgaacctgtg cgaagccaag gtcgtgactc
     5701 tgaaccggag cgccagcgga gacctgtggg tcgattaccg ctaggcagct ggcccgccgg
     5761 ggcggcatag gcagcagccg tttttcgctt cggggtcgaa tcgagcaact tgggcccggc
     5821 gacgaacacg acgccggtgc aggcggcggc gagcagccag ccgccgaagc cgggatattg
     5881 cgcgagataa tgctggccgc gttcgacggc gccgatcgaa atggcataga tgaccagcca
     5941 cgcctcgaag cgcgtcttga tcacgaaaag tcttccgatc ttgctcagca tggccttggt
     6001 taagagttga acgtgccagc cgcggttttg agccgtttaa gtcctaacag gcaaggttaa
     6061 agtcacggta agaagtcgtc gcgcgtcccg tttcgggact ggcgctcagg cgagttcgcg
     6121 caggtcgagg agatcgagca gcgccgtccg ggcgctctcg accgcagaga ccagctccgg
     6181 cagctgaagc tcgtcggcat ggatttccga aggccaagtg ctttcgacga cctcggcaat
     6241 ccggtcgagc ttggcttcgt cggccagaaa ccgcggatcc accgtagcgg gatcggcggc
     6301 gacccgcagt cgaaggcagg ccgggccgcc gccgttggcc atcgactcgc ggacatcgac
     6361 cacttcgacc tttcgaatcg ggccgttgcc ggcgaggtgc cgttccagcc acgcccagac
     6421 cgacggcgtc tcgcgcgctt cggctggaac gatcagcgtc gtctcaccac ccggcgggct
     6481 gaccagctgg gcgttgaaca ggtaggacga gacggcgtcg gtaatcgaaa cgtcggaatc
     6541 ggcgacttcg acaagctcca tttgcgggaa cagccgctcg cattcgccca gcacccggcc
     6601 gcgctcggca aaagccttct cgtgcgcgaa cagcacccgg cggttggcaa ccgcgacgac
     6661 gtcgttgtgg aaggcgcccg ccgcgatgac ctcctccgac tgctcgacga acagcgtacg
     6721 ttccggatcg agtttgtgca gcctggcgat cgccttcgac gcttcgaggt gctggcgggc
     6781 cgggaaggcg ccgccgctca cgccgtagac gaacagctcg acaccgggct cgccatagtc
     6841 gccggccagc cgcatgtgat tggccgcgcc ctcgtcgcca aacgcgcacg gcaccggcgc
     6901 gtggaccgcg aacgccggac cggagaaggc aagccgaagc tgggccaggg tcgccggcca
     6961 ctcgtggctt cggtgcgcca tcgtccgcaa attcgcgacc gtcaggtggc atttgccgtc
     7021 ggcgcaatcg ggggccgggg acacggtcgc ggcattggcc gcccacatcg ccgaagccga
     7081 catcgcattg gccgcgatcc tcggttccgc ttcctcgacc ctcgtgccca gcgcggcgag
     7141 ccagtcgcgg ttgggcctcg ggtgcgggac gaaaagcccc tgcgcaagtc cgagccgcag
     7201 gttcgcccgc atcttgtcga tgccctgaag cgcagccgcc cgcggcttcg acacatggcc
     7261 gacgttgcgg gtcgaggcga ggttgccgag gctcaggccg gcataattgt ggctcgggcc
     7321 gacgatcccg tcgaaattga tctcggtgag catcagcgcg ccactgcgag gacctggtca
     7381 ccttcgccga tctcgagcag ttcggcggcg tccttgtcga tcagcagcct gtcgtccgaa
     7441 tcccgtcccg cggcggtgca gcaggcacgg aaatcgccta gccttccggc ggcaaccagc
     7501 atcttgtgct tgccgccctg gccgacgctg ccgatggtct cgagacagct ttcgcggatc
     7561 gtccggatct ggtcggtttg cgcgatcacc gtagggccgc cgtcgaagat gtcgatgtaa
     7621 cggtcgaaga cgaagccctc gctctccagc atcttcagcg ccgcgcggcc gctggggtgc
     7681 ggctggccca tcaccgactt cgcgctttcc ggtagaagcg cgacatagat tggggtgcgg
     7741 ggcatcaggt cggcgatgaa cttggtgccg tgaacggcat tgaagtcgtc ggcctcgggg
     7801 aaggtcatcc cgaagaactt gcccgccagc gcgtcccaga aaggcgcgtt gccggcttcg
     7861 tccatcactc cgcgaagctc ggccaggacc cggtcgccga aacgctggcg gtgcgccttg
     7921 atgaacagat agcggcttcg ggcgagcagc gcgccgaatc cccccgctcg gctttccggg
     7981 tgaaggaaca ggccgccgac ttcggacgcg ccttcgaggt cggtggtcag cgtcagcata
     8041 tggttgcgga aggtcttccc cagctccggg ctgctctggg tcaaagtgct catgtgatag
     8101 ctgtagaagg gctgctcgca gccgacctgg ccgaacactt ggcaggtgcc gcggattttc
     8161 ctgctcttcg ggtcctcgag cacgaacacg taaaggtcgc cgcgctgctc gtcgccttga
     8221 cggtcgaagg attccgccga gcgctcgagc ttcctgacca gcgtcgcctt gtcgggcggc
     8281 aggttggtga agccgccacc ggtcagcttg gccatcttgt agatgtcctg gtaatcctcc
     8341 ggccgcgccg gtcgcacccg gaagctcaca gccgcccctc ggcaattcga aggactgtta
     8401 gtgcggacag cgccgcgcgc tcgccgagac tgccggtaat cagatattcc tccatgctgt
     8461 ggatcttgcc gccgcgaacc cccatcgtgt cgaccacggg cactccgcag gcggcgatat
     8521 tgttgccgtc gcacacgccc ccggtggatt tccagccgat gtcctggccg aggtcggacc
     8581 ccgacgcctt caccagcgcg aacagtcgct ccatgtcctc cgtcatcggc ttgggcggcc
     8641 gtccgaagcc gccgtgggcc tcgatcgtca cctcgcgctc cgcggcaacg gcggcaacga
     8701 gctcttcgac cgcgcgctcg gcctcggcct cgagctctgg agtgcgcggg cgcatgttga
     8761 cccgaagcac cgccatgtcg ggcacgacgt tgcttgggga cccgccgtcg atccgcgcgg
     8821 gattgacgct cagcccgtcg cgcttgagcg agtccagccg aagcgcaagg tccgccgctg
     8881 caagaagcgc attgcgcccc tcttcgggat tgcgcccggc atgggcggag cggccgcgga
     8941 cgacgagcga ataattgccg ctccccggcc gtgcaccggc aagggttccg tcgggaagcg
     9001 ccgacggctc gtaggtcagt gccgccgtct tgccctgagc ggccctcgcc agcagcgccg
     9061 cagaacccag cgacccgact tcctcgtcgc tgttgacgac gatttcgtag ccgagcttcc
     9121 cggcaacgtc gcttgcctcg atcgccttca gagccgccag catcaccgca aggccgccct
     9181 tcatgtcggc aacgcccggc ccgttgagcg ttccatcgtc gagccagcgg gtctgctgga
     9241 aagcgtggtc gactggaaaa acggtgtcca tgtggccggt gaagagcagc tgcaccggtg
     9301 cgtccgcgcg gacggtcagg tgcaggttct gcccgtgctc cagcgcattc gtcctgccgc
     9361 tcgaatccac actctcgaca ggttccgaat ccagcagctc caattcgccc ggaagcaccg
     9421 cgaaggcgtc ggcaagcacc gccgccatcc gctccagccc agggaggttg cgcgagccgc
     9481 tgttgagagc gctccactcg agcacctggt cgagcatcgg ctcggcggat gcccgctcga
     9541 cgactgcatt ttcgatggcg ctgagggccg gcatggccgt tccctagccg cgcctccggg
     9601 ggaaggccac accctcggca tttggtctcg caaccatgcg gcgctgaaac ggttgttgcg
     9661 gccatgaaac cgaatgagct catcctcgct gccgctgcga tcctcgttcc ggccacggag
     9721 gcaagcgccc aggtcgtcgg cgattatcga gttcgcgtcg ggatcggagc gcaggtgcgc
     9781 ccggaattcc cgggcgccga agacagcgaa gtcgctcctt acccgagttt cagcttcgcc
     9841 aagggcgaca agcccttttc gctgggcgcc ccggatgaca gcctcggcat tggtctgatc
     9901 tccagcggcg gcttttcggc cgggcccgcg gtggcgctta tgtcctcgcg ccaaaattcg
     9961 gatgttggcg cgccggtcgg caaggtcccc tggacgttcg aggcaggggc cttcgtccag
    10021 cagcagatcg gcgactcctt ccggcttcgc ggcgaggtcc gccgcggaat cggcggtcac
    10081 ggcggatggg tcggccacat tggcgccgac tacatggccc gcgacgccga caaatggacc
    10141 ttcacaatcg gcccccgggt ccgcttcgcg aacggccgct acatgcgcga atatttcgga
    10201 gtcactccgg aagcggcgct cgccacaggg ctgccaacct atcgccccga tgggggagtg
    10261 aaggccgtgg gcatggcgtc cggagcaacc tattctctcg gcgggccgct cggccttttc
    10321 agctatgtgc gctacgaccg attggtcggg gacgcgaagc ggtcgccgat cattcgacag
    10381 ttcggctccc gaaaccagtg gtcggccggt gtcggcctgt cctacgtctt caacctgaag
    10441 atctagcgct caagataatc cgcgaaatcg tccagcaggc ggcggtacag gtcgcgcttg
    10501 aacgggacga taagctccgg cacctcgccc ggatcgaccc atttccagtc acggaattcc
    10561 ggctcgtgcg cgttgaggtc gatgtcgccg tcgctgccca ggaagcgggc gaggaaccag
    10621 tgctgctcct gcccgcgcca cttcccgccc caaagccgtg tccgccactc ctctggcagg
    10681 tcgtagcgaa gccgctcgga gcattcggcg accagttcga ccagctgggg agcgattccc
    10741 gtctcctcct cgagctcgcg gagcgccgcc ggccacggct cctcgtccgc gtcgatcccg
    10801 ccctgcggca tctgccacgc gtcctcggga ttatcgacgc gcgcgccgac gaagaccttg
    10861 ccctcgcgat tgaggagcat cacgccgacg ccaaggcggt agagatggcc gtcatcgctc
    10921 acgggtccgg tttaagcgca aagccaatgt ccgcaatggg tggaaagcgg cggccgccct
    10981 gttagagcag gtgcggaccc ggggggcttg caccaatgct gtactacatt ggaataatga
    11041 tcggtgcgtc gttcctcgct tttgcagcgt ggctcatcgt tttccgtgac caacagcgta
    11101 ctcggctgat cgtaacatct atctggctgt ttgcggtccc tatcaccttg ttggtgctgg
    11161 acaactatct tgtaggcctc ctttggagcc ttcctttgct ggcaattatt gcgttggaag
    11221 aagctctgaa act
//
LOCUS       DATAKH010000142        13971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_2943,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000142 DATAKH010000000
VERSION     DATAKH010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 13971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13971
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2943"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..1231)
                     /locus_tag="VHN55_05750"
     CDS             complement(65..1231)
                     /locus_tag="VHN55_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class V aminotransferase"
                     /protein_id="HEX2803470.1"
                     /translation="MSFKPLFSKTLGADPDRLHMAAHSHHLWPDASFDGQVECWDDAA
                     RFADRKWDRVMDKVWPEAQRHVASELGTGMTGEIVFAPNTHELLVRLFAAVSAKRPVR
                     VLTSDGEFHSARRQFSRWEESGAAAVTRVAAEPFGDFSDRFLEAAASGGHDFIFVSQV
                     LFGSGRLFENAGDLARLSSPDGPWVVIDGYHAFMAVDAPFTANAGTSAFYLGGGYKYA
                     MAGEGCAFLHAPPGFGPRPPVTGWFAEFDDLTLPRGIVGYASDAMRFMGATFDPSGLY
                     RFNAVQRMLDENRLTTARISAHVEHLQHRLLDLVAKSPLGTAELLNPLSGSPHARFLA
                     FRSTDAQDWCAELASRNCVVDVRGDVLRVGLGLYHDESDIDRFAELAATLGGKQ"
     gene            complement(1228..1995)
                     /locus_tag="VHN55_05755"
     CDS             complement(1228..1995)
                     /locus_tag="VHN55_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017669631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase"
                     /protein_id="HEX2803471.1"
                     /translation="MTATPAGMTYADYLKLDDLLSAQQPLSGLHDEMLFIVIHQTKEL
                     WLKQMLHELGFAIGLVEQDRFAPAYKALARVGRIQSVMTLSWDVLSTLTPVDYLKFRD
                     VLGTSSGFQSAQFREFEYRLGLKDEAYLKHYSADSEQHARLRRAIDEPSLREASHSAL
                     ERAGFDLGDRSDQAIANAWLQVYRDSDRWFELYQLAEKLLDVDDALAGWRHKHVLTVE
                     RIIGNKRGTGGSAGASYLRSTLDKRAFPELWALRTDL"
     gene            complement(2053..2517)
                     /locus_tag="VHN55_05760"
     CDS             complement(2053..2517)
                     /locus_tag="VHN55_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008832064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEX2803472.1"
                     /translation="MNAAMAKIALAVAGAALVGGCAGMRDHRGAVVDPELVSAIQPAI
                     DNKTSVAATLGRPTFEGQFSDNDWYYVSRDTKTIAFRNPSVQKQTVVHVRFDAAGNVV
                     SVNQTGKELVANIDPVDDKTPTLGRDRSLFEDIFGNIGTLGTAAPGAGQQPQ"
     gene            2635..3147
                     /locus_tag="VHN55_05765"
     CDS             2635..3147
                     /locus_tag="VHN55_05765"
                     /inference="COORDINATES: protein motif:HMM:NF015914.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HEX2803473.1"
                     /translation="MLRFLFRRLTDEPARGQALFDAVVAEARRPHWYLDGEVADTIDG
                     RFAMLASICALVIVRLESGSEELGVASAALTERFVEAMDSEHRELGLNDPGLGRRVRK
                     LVASLERRVDEWRDAVHDERDWTETVVSSLYRRESPKDAALEHSAEAIRDLWRRLCQA
                     PEADLLEGRL"
     gene            3147..3671
                     /locus_tag="VHN55_05770"
     CDS             3147..3671
                     /locus_tag="VHN55_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEX2803474.1"
                     /translation="MHDNFAHRLGLDRIGDGERVDLVADESERRAVADRLGLPSLDRL
                     EAHVTLGRDGEKVRAKGRIRAALEQCCVATGDPVAEHVDEAFEVLFLPEPREGHPDEE
                     IELSGEDCDVAFYDGGAIDLGAAVADSLALAIDPYPRSANADSALKAAGIIGEAEAGP
                     FAALAKLKKDAGEP"
     gene            complement(3668..4126)
                     /gene="ssb"
                     /locus_tag="VHN55_05775"
     CDS             complement(3668..4126)
                     /gene="ssb"
                     /locus_tag="VHN55_05775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEX2803475.1"
                     /translation="MAGVNKVILVGNLGADPEARSLNNGGEVVNMRVATSESWKDKAG
                     ERQERTEWHNVVIFNENLGRVAKSYLRKGSKVYLEGQIQTRKWTDQSGNDRYTTEIVL
                     QRFRGELVLLDSAGGSRGGYDDQDSGGSQRQQSRPQPATFDNELDDDVPF"
     gene            complement(4189..6141)
                     /locus_tag="VHN55_05780"
     CDS             complement(4189..6141)
                     /locus_tag="VHN55_05780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HEX2803476.1"
                     /translation="MPHASTLRSLVALILLAFGAMLAAPASASSTAQEVQTSWRLLDY
                     IAVDYREAVTGGRVVNQLEYDEMIEFSAGVSDKLAALPAKPERAALIEEARALQSAVA
                     RKAAPADIARRAKHLAGQLLAAYPVPLAPGNVPDVSRGAALYAENCASCHGGKGEGPP
                     PAFAALDPAPIAFADRGRARERSLFGLYQVITQGLESTAMQSYSSLSEEDRWALAFHA
                     GGLAYGDAAQGERIWKSDPSVRALVPDMAALVALTPAELESKIGADRAAAVTAFLRSS
                     PDAVAAPSGGANASLGLARERLRESLAAVARGDRSEANRLALSAYLDGFEPVEAVLAM
                     RDGKLMSDVEQAMAGFRQAIGRGESEGQLRQRLAEISGLLDRSEAALAPEAESKVATF
                     LGSFTILLREGLEALLVVVAMIAFLRRAERPEALRYVHAGWAVALLAGAATWLVATYA
                     LSISGKTRELTEGFGSLLAALILLSVGVWMHGKAQADEWRRYIAEKMQGALSRGSGWF
                     LFGLAFIVVYREVFETILFYVALWTADNGGVLLAGALAAVALLAVIAYAMLRLSRTLP
                     IAQFFRYSAILIAVLAVVLAGKGVGALQEAGTIGITPLAAVPRIAMIGLFPTLEAVAA
                     QLAMLAALTFGFRAAARPRPLAAPAE"
     gene            complement(6188..6835)
                     /locus_tag="VHN55_05785"
     CDS             complement(6188..6835)
                     /locus_tag="VHN55_05785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007684494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COQ9 family protein"
                     /protein_id="HEX2803477.1"
                     /translation="MAGPSPLERIRERLALAVGENAVFDGWTRAAVDSAAAQLGIDSA
                     QARLAFPKDQAGMVDAYIQAVDREMEKKLPPAKLKGMKIRAKIRALVWTRLEIMGGAR
                     EAVRKALSILAMPQNVPAGARIGWRSADLMWRLAGDTSTDFNHYTKRVTLGAVYASTL
                     LAWLDDDSDGWAETGAFLDRRIDNVMQFEKWKAQWRSQERFSVSRFLGRLRYPPR"
     gene            complement(6842..7741)
                     /locus_tag="VHN55_05790"
     CDS             complement(6842..7741)
                     /locus_tag="VHN55_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2803478.1"
                     /translation="MTAVGRQPHPLAFPALLLGNVALAFGPWLVRLADVGAVATGMWR
                     LVLALPFLWAIARLSGQAPHWPKRALVVTVAIAAAFYALDLAAWNAGILMTKLGNATL
                     FGNSGSFVFALYGLVLLRRLPSGRQAGALVLALGGAALLMSSSYELSPKNLGGDLLTL
                     AAGLLYGGYLIFIDRARRQLQPLPLLLLATLFAIPVLLAISVGTGERIWPQDWTPLII
                     FALSSQVLGQGLLVYSIGVFPPLVVGLALLTQPAIAALIGWFAYGESLSTADWIGALA
                     VATALILVRLPPRGLRGGAPQPS"
     gene            complement(7738..8160)
                     /gene="ribH"
                     /locus_tag="VHN55_05795"
     CDS             complement(7738..8160)
                     /gene="ribH"
                     /locus_tag="VHN55_05795"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEX2803479.1"
                     /translation="MSTILLAEARFYPDLSDQLLAGARAAIEAAGHKHETVSVPGALE
                     LPAAINLTAKSGRFCAFVALGVVIRGETYHFEIVAEESARALMDLTLQGFAIGNGILT
                     VENEAQAIERADPGRGDKGGHAARAALALYDLREKYGA"
     gene            complement(8165..9448)
                     /gene="ribB"
                     /locus_tag="VHN55_05800"
     CDS             complement(8165..9448)
                     /gene="ribB"
                     /locus_tag="VHN55_05800"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017672103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEX2803480.1"
                     /translation="MSTTLIDRLTAIIDTGEVSRAALARAAGLHPNSLRKLGAPDWNP
                     TADTLKRLEKLIQRGTTGVLVGAEAIIDEARNGRMFILVDDDDRENEGDLVIPAQMAT
                     PDAINFMARHGRGLICLALTKERSDQLGLEPMARTNRSRNETAFTVSIEAKEGISTGI
                     SAADRARTVSVAIDAANGPGAIVSPGHVFPLVARPGGVLVRAGHTEAAVDVARLAGLN
                     PSAVICEIMSDDGSMARLDSLMDFARAHGLKIGTIRDLIAYRLKKDHLVERTSSTSFK
                     AVSGADWEAQVFRDKASGEEQLALIHGSLDTDRPVLVRMHSLDLFADVLGEQGPRSGL
                     LQGAMRAIEREGSGVVVALHAAAPGSLSRSIDVRAGNPVEGGDAIRSYGIGAQILAAL
                     GIHDMILLSNTSHSPVALSGYGLAIVDERPIETGA"
     gene            complement(9500..10105)
                     /locus_tag="VHN55_05805"
     CDS             complement(9500..10105)
                     /locus_tag="VHN55_05805"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017501107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEX2803481.1"
                     /translation="MFTGIVTDVGTVIAAEQRADLRLRIRTAYDLSTVDLGASICCSG
                     VCLTVVDKGEDWFAVDLSTETLSRTAPGLWKDGSRLNLERSLRVGDELGGHFVTGHID
                     CTGKVVDVSPEGGSTRIAVAIPGEHSALVAAKGSIALDGVSLTVNDVSDSDGTVRVSA
                     NIIPHTAGHSTLGSVAAGQQLNVEFDVLARYIDRMIAARAH"
     gene            complement(10115..11071)
                     /gene="ribD"
                     /locus_tag="VHN55_05810"
     CDS             complement(10115..11071)
                     /gene="ribD"
                     /locus_tag="VHN55_05810"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010405854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEX2803482.1"
                     /translation="MAEAVALGDSALGTTAPNPNVGCLIVSAAGVVVGSGATAPGGRP
                     HAEAVALAAAGRKARGSTVYVTLEPCAHDSERGPACSDLLVAARPARVVVALRDPDPR
                     TRGKGLKRLRDSGIEVKVGIGRSAAAESLAGYLLRLKLGRPRITLKLALSIDGKIALP
                     SGESQWITGEDARRHVHLERSRSDMILVGRGTYMADRPRLDVRLPGLEERSPRRALLT
                     RGDAVEGWEVLRSPQDVYRLHDVNDLLVEGGSATATAFLSEDLVDRILIYRAPIIVGE
                     GKSSFGYVGLDAIADAHGRWRPAGKQRLGVDRLEVYERAREG"
     gene            complement(11085..11408)
                     /locus_tag="VHN55_05815"
     CDS             complement(11085..11408)
                     /locus_tag="VHN55_05815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803483.1"
                     /translation="MSWIPRPVGPREALRDLGAFMRQRSPEQMIGASLAVLATIIIVI
                     LFLVDSKINTAPPQQIVYLDSWSANRTDAEIVADQKKDQAKRRAAQAEKQRQFQKLAN
                     QLGID"
     gene            complement(11456..12115)
                     /locus_tag="VHN55_05820"
     CDS             complement(11456..12115)
                     /locus_tag="VHN55_05820"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX2803484.1"
                     /translation="MSVYAPLPAYADHKRHPRALLLIIGGHAALLAAVMTARMDLPSR
                     FVPPPTIVDLIDEQKPPPENPPPPQTQQQPRSTLDQPVTIVPIPQPAQPQVDQDPLPL
                     PPVDLGPVIGSGSSGALPLPPEPVRVGPRFATAASDVKPPYPQSKLRSQEEAVLRLRL
                     NIDDRGRVTAVDPVGSADPVFLAAARKHLIAHWRYRPATEDGRAVAASTVITLRFRLD
                     Q"
     gene            complement(12202..13521)
                     /gene="gltX"
                     /locus_tag="VHN55_05825"
     CDS             complement(12202..13521)
                     /gene="gltX"
                     /locus_tag="VHN55_05825"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013834373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX2803485.1"
                     /translation="MSVVTRFAPSPTGRLHVGNIRTALHNFLYALKQGGRFTLRIDDT
                     DRERSTAEFDQAIRDDLAWLGLHPDKIVRQSERFDLYEREFERLKASGRVYACYETPE
                     ELELRRKVLLGRGLPPVYERKAADAPVPDGRAPHWRFRLDHNSPIEWFDLIRGPQKFD
                     PTLLSDPVIRRADGSWLYLLPSVIDDIDLAITHIVRGEDHVSNSAVQIQMFEALGAAP
                     PQFAHEALLVAAEGKLSKRLGSIGADEVREPGFEPMALLSVLARIGTSQPVEPAHRLE
                     ELASDFDFAYFGRAPAHFDLHDVELVNAKLIHSLDFADVRGRLPEATDERDWQLVRPN
                     LTRVGEFAEWANVLHGTIDAPDLNHEERALVRKAAAISADLDWSAEPWSQLTGRLKES
                     SGQKGRALFHPLRLAITGRDSGPEMAGLIERIGKERVVRRLEEAAHR"
     gene            complement(13518..>13971)
                     /gene="nadE"
                     /locus_tag="VHN55_05830"
     CDS             complement(13518..>13971)
                     /gene="nadE"
                     /locus_tag="VHN55_05830"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014078010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEX2803486.1"
                     /translation="VGYATLYGDMAGGYSVLKDAYKTTVFKLSEWRNAHKPKGALGPD
                     GPVMPKRIITKPPSAELRPNQTDQDSLPPYDVLDPILEGLVDKEMSVKEVALAIGADT
                     SLVADIERMLLRAEYKRRQAPPGVKIGTRNFGRDRRYPITNFFHTGAK"
BASE COUNT         2372 a         4530 c         4779 g         2290 t
ORIGIN      
        1 ttgaagatgt aggcgagcag aagcagcgcg aggaggactc gcggggagct cggcttcggc
       61 tcggtcattg tttgccgcct agcgtagcgg ccagctcggc gaagcggtcg atgtcgcttt
      121 cgtcgtggta gaggccgagg ccgacacgaa ggacatcgcc ccggacgtcg acgacgcagt
      181 ttcgggaggc gagctcggcg caccagtcct gcgcatccgt gcttcggaac gcgaggaagc
      241 gcgcgtgcgg agatccggat agcgggttca atagctcggc cgtcccgagc ggcgactttg
      301 ccaccaggtc cagcagacgg tgttgcaagt gctcgacgtg ggccgaaatg cgcgccgtcg
      361 tcagcctgtt ttcgtcaagc atccgctgca cggcattgaa ccggtagagg ccggacgggt
      421 cgaaggtcgc gcccatgaat cgcatggcgt cgctggcgta gccgacaatt ccgcgcggca
      481 gggtcaggtc atcgaactcg gcgaaccagc cggtgaccgg cggccgcggc ccgaaccccg
      541 gcggcgcgtg aaggaaggcg cagccctcac ccgccatcgc atatttatac ccgccgccca
      601 ggtagaaggc ggatgttccg gcgttggctg tgaacggcgc gtcgacggcc atgaacgcgt
      661 gataaccgtc aatgaccacc cacgggccgt ccggtgagga gagcctcgcg agatcaccgg
      721 cattctcgaa tagccggccg ctaccgaaca agacctggct gacaaagatg aagtcgtggc
      781 cgcccgaggc tgcggcctca aggaagcgat cggaaaagtc gccgaacggc tcggccgcca
      841 cgcgggtaac cgctgcggcg cccgattcct cccatcttga gaattggcgg cgcgcgctgt
      901 ggaactcgcc gtcgctggtc agcacgcgga ccgggcgctt cgctgaaacc gcggcgaaga
      961 ggcggacgag aagctcgtgg gtgttcggtg cgaacacgat ttcgccggtc atgcccgtcc
     1021 cgagctccga ggctacgtgc cgctgcgcct ccggccacac cttgtccatg acccggtccc
     1081 acttgcggtc ggcgaaacgg gcggcgtcgt cccagcattc gacctgcccg tcgaagctcg
     1141 cgtcgggcca caggtgatgg ctgtgcgctg ccatgtgcag ccggtcggga tcggctccaa
     1201 gggtcttcga gaaaagcggc ttgaagctca aaggtcggtc ctgagcgccc acagctccgg
     1261 gaatgcccgc ttgtccagag tcgagcgcag gtaggacgct ccggcggagc cgccggtccc
     1321 ccgcttgttt ccgatgatcc gctccacggt cagcacatgc ttgtgccgcc agccggcgag
     1381 tgcatcgtcg acgtcgagaa gcttttcggc aagctggtag agttcgaacc agcggtcgga
     1441 atcgcggtac acctgcagcc aggcgttcgc gatcgcctgg tcagaccggt cgccgaggtc
     1501 gaatcccgcg cgctccaagg cggagtgcga tgcttcgcgg aggctcggct cgtcgatcgc
     1561 cctgcgcagg cgcgcatgct gctcgctgtc ggcggaataa tgtttgagat aggcttcgtc
     1621 cttgaggccg aggcgatact cgaactcgcg gaactgcgcc gactggaaac ccgaggatgt
     1681 cccgagcacg tcgcggaact tgagatagtc gacgggcgtg agcgtggaaa gcacgtccca
     1741 cgataatgtc atcaccgact ggatccgccc aactcgcgcg agcgccttat aagcgggggc
     1801 gaaacggtcc tgctcgacca gcccgatggc gaagccgagc tcatggagca tctgcttgag
     1861 ccacagctcc ttcgtctggt ggatgacgat gaacagcatc tcgtcgtgca ggcccgacaa
     1921 tggctgctgc gccgagagaa gatcgtcgag cttgaggtaa tcggcatagg tcatgccggc
     1981 cggggtcgcg gtcatgtcct agcgcttaag cgaaacggcg ctcccgcaaa agcgccgaag
     2041 gcatggcgcg cgttactggg gctgttgccc ggcgcccggc gctgcggtgc ccaaggtgcc
     2101 gatattgccg aaaatatctt cgaacaggct tcggtcacgg ccgagcgtcg gagtcttgtc
     2161 gtccaccggg tcgatgttcg cgaccagctc cttccccgtc tggttcacgg aaacgacatt
     2221 gccggctgcg tcgaatcgaa cgtggacgac cgtctgcttt tgaaccgacg gattgcggaa
     2281 ggcgatcgtc ttcgtgtcgc gcgagacata ataccagtcg ttgtcgctga actgcccttc
     2341 gaaggtcggg cggccgagcg tcgcggccac cgaggtcttg ttgtcgatcg caggctgaat
     2401 cgctgaaacg agctccgggt cgacgaccgc gccacgatgg tcgcgcatcc cggcgcagcc
     2461 gccaaccaaa gcagcgcccg cgactgccaa cgcgatctta gccatcgcag cgttcatatc
     2521 gattcgtctc ccggaactct cggcccgctt gaaacaattt gtcgcaaggc ggcaaacgcc
     2581 aatatgcgct tggcgcacgg gcgcgcaacc ctgcgccgtg ctagagcgag tcctatgctt
     2641 cgattcctgt tccgcagatt aacggacgag ccggctcgcg ggcaggcgct gttcgacgcg
     2701 gtcgtagccg aggcgcggcg tccccattgg tatttggacg gcgaggtcgc cgacaccatc
     2761 gacgggcgat tcgctatgct cgcaagcatt tgcgcgctcg tcatcgtccg gctggaatcg
     2821 gggagcgagg aactcggcgt ggcgtcggcg gcgctgaccg aaaggttcgt cgaggcaatg
     2881 gattcggagc atcgcgagct cggactcaac gatcccggcc tcggccggcg cgtccgcaag
     2941 ctggtggcat cgctcgagag gcgggtcgac gagtggcgcg acgccgtcca cgacgaacgc
     3001 gattggaccg aaacggtcgt ctccagcctt taccggcgcg agtctccgaa ggacgcggcg
     3061 ctggagcata gcgccgaggc gattcgcgac ctttggcggc ggctctgcca agcgccggaa
     3121 gccgatcttt tggaaggacg gctgtgatgc acgacaattt cgcccaccga ctcggcctcg
     3181 atcggatcgg cgacggcgaa cgggtcgacc ttgtcgccga cgagagcgag cgcagggcgg
     3241 tggccgatcg gctcgggctg ccgtcgctcg accggctcga agcgcatgtg actctcggcc
     3301 gcgatggcga gaaagtgcgg gccaaggggc ggatccgggc ggcgctcgag caatgctgcg
     3361 tcgccaccgg cgaccccgtc gccgagcatg tcgacgaagc tttcgaagtc cttttcctgc
     3421 cggagcctcg ggagggacac ccggacgagg agatcgagct tagcggcgag gattgcgacg
     3481 tcgccttcta cgatggcggg gcgatcgacc tcggcgccgc ggtcgcggac agcctggcgc
     3541 tggcgatcga cccctatccg cgaagcgcga acgccgactc ggcgctgaaa gcggcgggaa
     3601 tcatcggaga agccgaggcc gggccgttcg cggctctggc gaagctcaaa aaggacgccg
     3661 gcgagcccta gaagggaacg tcgtcgtcca gctcgttgtc gaaggtggcc ggctgcggcc
     3721 gcgactgctg ccgctgcgag cccccggaat cctggtcgtc gtagccgccg cggctgccgc
     3781 cggcggagtc gagcagcacc agctctcccc ggaaccgctg cagcacgatc tcggtcgtat
     3841 agcggtcgtt gccgctctgg tcggtccact tgcgggtctg gatctggccc tccaggtaga
     3901 ccttggaccc cttgcgcaaa tagctcttcg cgacccgtcc gaggttctcg ttgaagatga
     3961 cgacattgtg ccactcggtg cgctcctggc gctcaccggc cttgtccttc cagctttccg
     4021 acgtcgcgac tcgcatgttg acgacttcgc cgccgttgtt gagcgagcgc gcctccgggt
     4081 ccgccccgag gttgccgacc aatatgacct tgttcacgcc cgccatcgcc gaatcctcca
     4141 ataactgtcg acttcaccta agccgtgcga ccggccgatg ccaagccgtc attcggccgg
     4201 ggcagcgagg ggacgtggcc tggcggcggc gcgaaagcca aaagtcagcg cagcgagcat
     4261 cgcaagctgc gcagcgaccg cttcgagagt cgggaacagg ccgatcatcg cgatccgcgg
     4321 gactgctgca agcggcgtga tcccgatcgt gcccgcctcc tggagcgcgc cgaccccctt
     4381 gccggcaagc accaccgcga gcacggctat caggattgcg ctgtagcgga agaattgagc
     4441 gatcggcagc gtccggctga ggcgaagcat cgcgtaggcg atcaccgcca gaagcgcgac
     4501 cgcggccagc gctccggcga gcaggactcc gccgttgtcg gccgtccaca gggcgacata
     4561 gaaaaggatc gtttcgaaca cctcgcgata gacgacgatg aaggcgaggc cgaacaggaa
     4621 ccagcccgac ccgcgcgaca gcgccccttg catcttctcg gcgatgtagc ggcgccattc
     4681 gtccgcctgc gccttgccgt gcatccacac gccgaccgac aagaggatga gagcggccag
     4741 cagcgaccca aagccttcgg tgagctcgcg agtcttgccg ctgatgctta gcgcgtaggt
     4801 cgcgaccagc caggtggccg ctcccgccag cagcgcgact gcccagccgg cgtgtacgta
     4861 tcgcaacgct tccggccgtt ccgcgcgacg caggaaggca atcatcgcga cgacgaccag
     4921 cagggcctcg agcccttcgc ggagcaagat cgtgaacgag cccaggaacg tcgcgacttt
     4981 gctctccgct tccggagcga gggctgcttc cgatcggtcg agcaggcccg aaatctcggc
     5041 caggcgctgg cgcagctgcc cttcgctttc gccgcggccg atcgcctggc ggaaaccggc
     5101 catggcctgc tcgacgtcgc tcatcagctt gccgtcgcgc atcgcgagca ccgcctcgac
     5161 tggctcaaaa ccgtccagat aggcggaaag cgcgagccgg ttggcttccg atcgatcgcc
     5221 acgagcgacg gcggccaggc tctctcggag ccgctcgcgc gccagcccca gcgatgcgtt
     5281 ggcaccgcca gaaggcgcgg cgacggcgtc gggactggag cgcaggaaag cagtgacggc
     5341 tgcggcccgg tccgcgccga tcttcgattc gagctcggca ggagtcagcg cgacgagcgc
     5401 tgccatgtcg ggcaccagcg cccgaaccga cgggtccgat ttccagatcc gctcgccttg
     5461 ggcggcgtcg ccgtaggcga gcccgccggc gtggaacgca agcgcccacc ggtcctcttc
     5521 ggaaagcgac gagtagctct gcatcgccgt gctttcgagc ccttgagtga tcacctggta
     5581 gaggccgaac aggctgcgtt cgcgggcccg gccgcggtcg gcgaaggcga tcggcgccgg
     5641 gtcgagcgct gcgaaggcgg gcggcgggcc ttcgcctttc ccgccgtggc aggacgcgca
     5701 attctcggca tagagcgcgg cgccgcggga cacgtccgga acattgcccg gcgccaacgg
     5761 cacggggtag gcggcgagca actgcccggc gaggtgcttg gcccgcctag cgatgtcggc
     5821 cggagcggcc ttgcgcgcga ccgccgattg tagcgcccgc gcctcttcga tcagtgcggc
     5881 gcgttcgggt ttggcgggaa gcgccgcaag cttgtcgctt acgccggcgg agaactcgat
     5941 catctcgtca tattcgagct ggttgacgac gcgcccgcca gttaccgcct cgcgatagtc
     6001 gacggcgata tagtctagaa gcctccagct ggtctggact tcctgcgcgg tcgaggaggc
     6061 ggacgcgggc gctgcgagca tggcgccgaa agcgagcagg atcagcgcaa caagggagcg
     6121 cagcgtcgac gcgtgaggca tcgcctgcca atagcatgct gcgaatgatt atcaataacg
     6181 cgaagcgtca gcgcggcgga tagcgaagcc ttccgagaaa ccggctgacg ctgaaccgtt
     6241 cctgcgaccg ccactgggcc ttccactttt cgaactgcat cacattgtcg atccgccggt
     6301 cgaggaaggc gccggtttcg gcccatccgt cgctgtcgtc gtcgagccag gcgagcagcg
     6361 tcgaggcata gaccgcgccc agggtcaccc gcttcgtgta atggttgaag tcggtgctgg
     6421 tatcgcccgc gagccgccac atcaggtccg ccgagcgcca tccgatccgc gctccagcgg
     6481 gcacgttctg cggcatcgcg aggatcgaca gggccttgcg gacggcctcc cttgcgccgc
     6541 ccatgatctc cagccgggtc cagacgaggg cgcggatctt cgcacggatc ttcatgccct
     6601 tcagcttcgc cggcggaagc ttcttttcca tctcccggtc gacggcctgg atataggcgt
     6661 cgaccatccc cgcctggtcc ttgggaaagg caagccgcgc ctgggcggaa tcgattccga
     6721 gctgggcggc cgcggaatcg acggcggcgc gggtccagcc gtcgaacacg gcattttcgc
     6781 cgacggcgag cgcaaggcgc tcacggattc gttcgagggg actcggcccg gccatcgcgg
     6841 ctcaactggg ctgcggcgcc ccgccgcgca acccccgcgg cggcaggcgc acgagaatca
     6901 gggcagttgc gacggccagg gcgccgatcc agtcggccgt cgaaaggctc tccccataag
     6961 cgaaccagcc gatcagcgct gcgattgccg gctgagtcag cagcgcgaga ccaacgacca
     7021 gcggcgggaa cactccgatg gaatagacca gaagcccttg gccgaggacc tggctggaaa
     7081 gcgcgaaaat gatgagcggg gtccagtcct gcggccaaat gcgctcgccg gtaccgacgc
     7141 tgattgccag aaggaccgga attgcgaaca gcgttgcaag cagcaggagg gggagcggct
     7201 gtagctgcct tcgagcgcgg tctatgaaga tcaggtaacc gccatagagg aggcccgcgg
     7261 caagagtgag caggtcgccg ccgaggttct tcgggctcaa ttcatagctg ctgctcatca
     7321 gcagggcggc gccgccgaga gcgaggacaa gcgcaccggc ctgcctgccc gacggcaggc
     7381 gcctcaacag gacgagcccg tagagggcga agacgaagct tccgctgttg ccgaacagcg
     7441 tcgcattgcc gagcttcgtc atcaggatcc ctgcgttcca tgcggcaagg tcgagcgcgt
     7501 agaaagcggc ggcgatcgcg accgtgacga ccagcgcccg tttcggccag tgcggcgcct
     7561 gtcccgacag ccgagcgatc gcccacagga acggaagcgc aagcaccaga cgccacatcc
     7621 ccgtcgcgac cgctccgacg tcggcaagcc gcaccagcca tggcccgaac gcaagcgcca
     7681 cgttgccgag aagcagtgcg gggaaggcga gcgggtgcgg ctgccgccct actgccgtca
     7741 agcgccgtac ttttcgcgca ggtcgtacag cgccagcgcc gcgcgggccg cgtggccgcc
     7801 cttgtcaccg cgcccggggt cggcgcgctc gatcgcctgg gcctcgttct cgacggtgag
     7861 gatgccgttg ccgatggcga agccctgcag cgtcaggtcc atcagcgccc gggcgctttc
     7921 ctcggcaacg atttcaaaat gataggtctc gccgcgaatc acgaccccaa gcgcgacgaa
     7981 ggcgcagaag cggccgctct tcgcggtcag gttgattgcg gccggcagct ccagggcgcc
     8041 gggaacgctg accgtctcgt gcttgtggcc ggcggcttcg atggcggccc tcgcaccggc
     8101 gagaagctgg tcgctgagat cggggtagaa tcgcgcctcg gcgagcagga tcgtcgacat
     8161 tgcctcaggc tcccgtctcg atgggccgtt cgtcgacgat cgccagcccg tagccggaca
     8221 gcgccacggg cgagtggctg gtgttcgaca ggaggatcat gtcgtggatg ccgagcgccg
     8281 cgaggatctg ggcgccgatc ccgtaacttc ggatggcatc gcctccctcg acgggattgc
     8341 cggcgcggac gtcgatcgag cgggacagcg agcccggtgc cgccgcgtga agagcgacga
     8401 cgacccccga gccttcgcgc tcgatcgccc gcatcgcgcc ctgcagcagg cccgacctcg
     8461 gcccctgttc gccaagcacg tcggcgaaca ggtcgaggct gtgcatccgg acgaggaccg
     8521 gccggtcggt gtcgagactg ccgtggatca gcgccagctg ctcctcgccg ctcgccttgt
     8581 cgcggaacac ctgcgcttcc cagtcggcgc cgctgacggc cttgaacgac gtcgatgagg
     8641 ttcgctcgac caggtggtcc ttcttaagcc ggtaggcgat caggtcccgg atcgttccga
     8701 tcttgaggcc gtgtgcgcgg gcgaagtcca tcagcgagtc gagccgcgcc atcgagccgt
     8761 cgtcgctcat gatttcgcag atgacggcgc tcgggttgag cccggcgaga cgggcaacgt
     8821 cgacggccgc ctcggtatgg ccggcacgga ccaggacacc gccggggcgg gcgaccaaag
     8881 ggaagacgtg cccgggcgac acgatcgcgc cggggccgtt ggccgcatcg attgcaaccg
     8941 aaaccgtgcg ggcacggtcg gcggcactga tcccggtgga aattccctcc ttggcctcga
     9001 tcgacacggt aaaggcagtc tcgttgcggc ttcggttggt ccgcgccatc ggctcgagcc
     9061 cgagctggtc cgaccgctcc ttggtaaggg cgaggcagat cagcccgcgc ccgtgccggg
     9121 ccatgaaatt gatcgcgtcc ggagtcgcca tctgcgccgg gatgacgaga tcgccctcgt
     9181 tctcgcggtc gtcgtcgtcg acgaggatga acatccggcc gttgcgcgcc tcgtcgatga
     9241 tcgcctcggc cccgaccaaa actccggtag tcccgcgctg gatcagcttt tcgagccgct
     9301 tgagcgtgtc ggcggtcggg ttccagtcgg gcgccccgag cttgcggagg ctgttggggt
     9361 ggagcccggc ggcgcgggcg agcgcggcgc ggctgacctc gccggtgtcg atgatcgcgg
     9421 tcagccggtc gatcagtgtc gtgctcatgg actcgccata tcacattaca atgtgattaa
     9481 aagcggattc ttgcctcgtt caatgtgcgc gagcggcgat catccggtcg atatagcggg
     9541 caagtacatc aaactcgaca ttcaactgtt gcccggccgc gacgctgccg agagtcgagt
     9601 gaccggcggt gtggggaatg atgttggccg atacccgcac cgtcccgtcg ctatcgctaa
     9661 cgtcattgac ggtcagcgag acgccgtcga gcgcgatcga gcccttcgcc gcgaccagcg
     9721 ctgaatgttc gccggggatc gcgactgcga ttcgagtcga gccgccttcc ggactcacgt
     9781 cgacgacctt gccggtgcaa tcgatgtggc cggtgacgaa gtggccgccg agctcgtcgc
     9841 caacccggag cgagcgttcg aggttgagcc tggacccgtc cttccacagg cccggtgcgg
     9901 tccgcgacag ggtctcggtc gaaagatcga ccgcgaacca gtcctcgccc ttgtcgacaa
     9961 cggtgaggca cacgcccgaa cagcatatgg acgcgccgag atcgacggtc gagagatcgt
    10021 aagcggtccg gatgcgcagg cgcaggtcgg cacgctgctc ggcagcgatg acagtgccga
    10081 cgtcggtgac gatcccagtg aacatgaccg ccgcctagcc ctcgcgggcg cgctcgtaaa
    10141 cttccagccg gtcgactccg agccgttgct tgccggccgg gcgccagcgc ccgtgggcgt
    10201 cggcaatggc atcgagcccg acatagccga acgacgactt gccttcgccg acgatgatcg
    10261 gggcgcgata gattaggatt cggtcgacca ggtcctccga gaggaaagcc gtggcggtcg
    10321 ccgagccgcc ttcgaccagc aggtcgttga cgtcatgaag ccgatagaca tcctgcgggg
    10381 atcgcaggac ttcccagccc tcgacggcat cgccgcgggt cagcaacgcg cgcctgggcg
    10441 agcgttcctc caggccggga agccggacgt ccagccgcgg ccggtcggcc atgtaagtgc
    10501 cccgcccgac caggatcatg tcggagcgcg aacgctcgag atgcacgtgc cggcgcgcgt
    10561 cctcaccggt gatccactgc gactcgccgg atggaagcgc gatcttgccg tcgatcgaca
    10621 gcgccagctt aagcgtgatt cgcgggcggc cgagcttgag gcggagcagg taaccggcca
    10681 gcgattccgc cgccgcgctc ctaccaatgc cgactttgac ctcgatcccg gagtcgcgga
    10741 ggcgcttgag gcccttgccg cgggtccgcg ggtccgggtc cctgagcgcg acgacgacgc
    10801 gcgcgggccg ggcggcgacc agcaggtcgg agcaggcggg gccgcgctcg ctgtcgtgag
    10861 cgcaaggttc gagggtcacg tagaccgtgg atccccgcgc cttcctgccc gcagcggcca
    10921 gtgcgaccgc ttcggcgtgc gggcggccac cgggcgcggt cgctccgctg ccgacgacga
    10981 cgccggcggc ggagacgatg aggcagccga cgttgggatt gggcgccgtg gtgccgagcg
    11041 ccgaatcgcc gagcgcgacg gcctcggcca tgaagcggcc ctcgctagtc aattccgagc
    11101 tggttcgcga gcttctggaa ctgccgctgc ttctcggctt gcgcggcgcg gcgctttgcc
    11161 tggtccttct tctggtcggc gacgatttcg gcgtcggtgc ggttggcgct ccagctgtcg
    11221 aggtaaacga tctgttgcgg cggtgcggtg ttgatcttcg aatcgaccag gaagaggatg
    11281 acgatgatga tggttgcaag caccgccagc gacgcgccga tcatctgttc cgggcttcgc
    11341 tggcgcatga aggcgccaag gtccctgagc gcctctctcg ggccgacggg gcggggtatc
    11401 catgacatca gcgcaaatgt aggcgttcgc gccgcgcgcc gccagagacc gcgcgttact
    11461 ggtcgagccg gaaccgcagc gtgatcaccg tcgaggccgc aaccgcgcgg ccgtcctcgg
    11521 tagcgggacg atagcgccag tgggcaatca ggtgcttgcg ggcagcggcg aggaacacgg
    11581 ggtcggcgct tcccaccgga tcgacagcag tcactcgccc ccggtcgtca atgttgagcc
    11641 tgaggcgaag caccgcctct tcctgcgacc gcagcttgct ctgtggatat ggcggcttga
    11701 cgtcacttgc agccgtggcg aaccgcgggc cgacccggac gggctcgggc ggaagcggaa
    11761 gggcgccact ggagccggaa ccgatcaccg gtcccagatc gaccggggga agcggcaggg
    11821 gatcctggtc gacctggggc tgcgccggct ggggaatcgg cacgatcgtg acgggctggt
    11881 cgagggtgga gcgaggctgc tgctgagtct gaggcggcgg cgggttttcg ggcggcggct
    11941 tttgctcgtc aatcaagtcg acgattgtgg gaggcggcac gaatcggctg ggaaggtcca
    12001 tcctggccgt catcaccgcg gctaggagcg cggcatgccc gccaatgatc aggagcagcg
    12061 cgcgcgggtg gcgcttgtgg tcagcataag ctggaagcgg agcgtaaaca gacatcaccg
    12121 aactccttca acgcgagtcc atacaatgtt acaacatcac attgttgaac gaaagctgaa
    12181 ttgtttcggt tccgcgggta tttaacggtg agcggcttcc tcgagccggc gcacgactcg
    12241 ctctttcccg atccgctcga tcaggcctgc catttcgggg ccgctgtcac gcccggtgat
    12301 cgcgaggcga agcgggtgga acaaggcccg ccccttctgc ccgcttgatt ctttcaggcg
    12361 cccggtaagc tggctccacg gctcggccga ccagtcgaga tcggcggaga tcgccgccgc
    12421 cttgcgcacg agtgcgcgct cctcgtggtt gaggtcgggc gcgtcgatcg ttccgtggag
    12481 gacattcgcc cattcggcga attcgccgac ccgcgtgagg ttgggccgga ccagttgcca
    12541 gtcccgctcg tcggttgcct cgggcaaccg cccgcgcacg tcggcaaagt cgagcgagtg
    12601 gatcagcttg gcattgacca gctcgacgtc atgaagatcg aaatgcgctg gagcgcggcc
    12661 gaagtaggcg aagtcgaaat cgctggcgag ttcttcgagc ctgtgtgccg gctccaccgg
    12721 ctgcgaagtc ccgatccgcg ccaggaccga cagcaaggcc atcggttcga aaccgggttc
    12781 gcgaacctcg tcggcgccga tcgagccgag gcgtttggac agcttgcctt cggcggcgac
    12841 aagcagggcc tcgtgggcga actgcggcgg cgccgcgccg agagcttcga acatctggat
    12901 ctgcacggcg ctgttcgaga catggtcctc gcctcggacg atatgggtaa tcgcgagatc
    12961 gatgtcgtcg atgacgctcg gcaggaggta cagccagctt ccgtcggcgc ggcgaatgac
    13021 cggatccgac aacaaggtgg ggtcaaactt ttggggccct cgaatgaggt cgaaccactc
    13081 gatcggcgaa ttgtggtcga ggcggaagcg ccagtgcggc gcgcgtccat ccggaacagg
    13141 agcgtccgcg gccttgcgct cgtataccgg cggaagcccg cgccccagca ataccttgcg
    13201 gcgaagctcg agctcctcgg gtgtctcgta gcaggcgtag acccgtccgc tggctttcag
    13261 ccgctcgaac tcgcgttcgt agagatcgaa tcgttccgac tggcggacga tcttgtcggg
    13321 gtgaagccca agccaggcga gatcgtcccg tatcgcctgg tcgaactccg cagtcgagcg
    13381 ctcgcggtca gtgtcgtcga ttcgaagggt gaaccttccg ccctgcttca gcgcatacag
    13441 gaagttgtga agcgcggtcc ggatattgcc gacgtgcagc cggccggtcg gcgacggcgc
    13501 gaaacgggtg acgacgctca tttcgcaccc gtgtggaaga agttggtgat cgggtaacgg
    13561 cggtcgcggc cgaagttgcg ggtgccgatc ttgacccccg gaggcgcctg gcggcgcttg
    13621 tactcggcgc gaagaagcat ccgctcgatg tcggcgacca gggaggtatc ggcgccgatg
    13681 gcgagtgcaa cctccttcac cgacatctcc ttgtcgacca ggccttcgag aatcggatcg
    13741 aggacgtcgt agggcggcag cgaatcctgg tcggtctggt tggggcgaag ctccgccgac
    13801 ggtggcttgg tgatgatccg cttcggcatc accggcccgt cgggccctag cgctcccttc
    13861 ggcttgtggg cgttgcgcca ctccgacagt ttgaagacag tagtcttata cgcgtccttc
    13921 agaaccgaat agccgccggc catgtcgccg tagagcgtcg catagccgac g
//
LOCUS       DATAKH010000143        11787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_25581,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000143 DATAKH010000000
VERSION     DATAKH010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11787
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25581"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VHN55_05835"
     CDS             <1..231
                     /locus_tag="VHN55_05835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803487.1"
                     /translation="NPDGRIASAGWRYETLSDQLDTFFRQIDADVVELPHAKRGLGSS
                     SLEVTSLLRRDQIDVINEAFAEEFETFGYPAV"
     gene            complement(228..3395)
                     /gene="putA"
                     /locus_tag="VHN55_05840"
     CDS             complement(228..3395)
                     /gene="putA"
                     /locus_tag="VHN55_05840"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010233934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEX2803488.1"
                     /translation="MPRPAGVAAAAEGAVPPDRTHVRLAYRPDEERLALERLEQARLD
                     PAQLKEATSIARTLVKGVRAHKPAGLDAFLHAYDLGSDEGIALMCLAEALLRIPDAHT
                     ADELIADKLSKPRWAEKLGESESTFVNAATFSLLLTGRVLEGAHDRSDNWRAALGRAV
                     GRLGEPVIRTAVNQAMRILGRQFVFGRTIGEAMKRAAPERRHGLTHSFDMLGEAARTF
                     EDAERYAEAYLRALDSIAKEASGGFARSPGISVKLSALHPRYEWSHGEEAKAYILPVL
                     RALAAKASAADVHLTIDAEEADRLELQMDLFEALAADGSLFANGWGGLGIAVQAYQKR
                     AYPLCQWTVDLARAHGRRFMVRLVKGAYWDTEIKAAQVGGLPDYPVFTRKSATDVSYL
                     ACTKLLLEAGDVIYPAFATHNGTTIGQVKALAGGTPFEFQRLHGMGEELYEELAKLES
                     DLGDEPTPVRIYAPVGSHKDLLAYLVRRLLENGANSSFVNRIADEHVSVEALVGDPVA
                     ELQAQEPKRNPAIPLPNEIFGPARKNSAGVDLSDPLVREPLLERLKDLESKNWEANPT
                     ERSRGEHPIRRITSPHDDRIEVGVANEATDGAIDRAITAASNAQPAWDALGGNARAEL
                     LEKTADLFEQNREAFFSLCIREAGKTLPDAVLEVREAVDFLRYYAAEARRQFSAPLPL
                     PGPTGESNELRLHGRGVWTCISPWNFPLAIFTGPVAAALAAGNAVMAKPAEQTPLIGA
                     FAVELMHKAGIPRPIVQLMPGDGRVGAALTAHPLTAGVAFTGSTDTARIIARSLAERQ
                     DGPIVPFIAETGGQNAMIVDSSALPEQVTRDVVASSFQSAGQRCSALRVLFIQEDVAD
                     DMIRMIAGAMNALAVGDPRKLTTDVGPVIDAAARQALRRHLDWLELHARKIMRADVPE
                     ELDAHGFFVPPAMYEIDNLKQLTEENFGPILHIVRWKAGELDGVIDQINSTGYGLTLG
                     LQSRIETTAEFVEQHARVGNLYVNRNQIGAVVESQPFGGEGMSGTGPKAGGPHYVARF
                     ATERVTCIDTTAAGGNASLMATLEG"
     gene            complement(3374..6115)
                     /gene="secA"
                     /locus_tag="VHN55_05845"
     CDS             complement(3374..6115)
                     /gene="secA"
                     /locus_tag="VHN55_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020820874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX2803489.1"
                     /translation="MFAALAKSIFGSANDRYVRSLGKYVEAINAFEPRIEALTDEELR
                     GQTEVFRKRLADGQKLDDLLPEAFATVREAAKRTLGQRHYDVQMIGGIALHRGEIAEM
                     KTGEGKTLVATLAVYLNALEGKGVHVVTVNDYLARRDADWMGQVYSFLGMTVGVIIPN
                     LTDEQRREAYGSDITYGTNNEFGFDYLRDNMKFTREQMVQRPFNFAIVDEVDSILIDE
                     ARTPLIISGPTDDKSDLYINVDKIVKTFTEEDYDKDEKQRSVVLTEEGTEKAERMLEE
                     AGLIEGRNLYDIVNTQTVHHLNQALKANVMFKKDIDYIVKDGKVVIIDEFTGRMMEGR
                     RWSDGLHQAVEAKESVFIEPENQTLASITFQNYFRMYPKLSGMTGTAMTEAPEFFDIY
                     KMNVVAIPTNVPVQRTDEDDEFYKNITDKFSAIAKELKTKQEKGQPALVGTVSIEKSE
                     MLSEYLDKEGIKHSVLNARFHEQEAHIVAQAGRIGAVTIATNMAGRGTDIQLGGNLEF
                     RMLDEFPDLVAGTPEYEAQAEKIRAEIVEEKRQVLDAGGLYVLGTERHESRRIDNQLR
                     GRSGRQGDPGLSKFYLSLDDDLLRIFGPQTMFARLMNKNLEDGEAIVSPWISKAIETA
                     QKKVEARNYDIRKQVVEYDDVMNDQRKVIYEQRADIMDSEDVGDVIADMRAETAAGII
                     MAHCPAGTYPEQWDLAGLKDSIDAVFGLQPPVEQWLEEEAVEQEMLIERLQAMADEHM
                     AEKLKEVDQAGWADIEKNILIQTLDHHWKDHLATLDALRQVIHLRSYAQRKPIDEYKQ
                     EAFLLFERLLLAIREDVTTRLMKINVQFEPAPALPPLPDFITQHIDPFSGEDDSADID
                     AATGAVMSNLPPVMPRPSLPAEAQPRDGETATAPISRNAPCPCGSGKKYKHCHGQLA"
     gene            6233..6670
                     /locus_tag="VHN55_05850"
     CDS             6233..6670
                     /locus_tag="VHN55_05850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX2803490.1"
                     /translation="MGLAGGCMCGAVRYELGSQPFDAGWCHCRTCQLNSGSPAMVFAT
                     VPVGDFHWTKGAEKVRSIQSSHFGRREFCGECGTPFLMKVDHQPETVDFSVATLDAPN
                     AVSPAYHIFWGSRVAWFDPGDDLPRFEKFRPDTRGLEGTRPPA"
     gene            complement(6667..6987)
                     /gene="trxA"
                     /locus_tag="VHN55_05855"
     CDS             complement(6667..6987)
                     /gene="trxA"
                     /locus_tag="VHN55_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEX2803491.1"
                     /translation="MATKTVTDQNFASDVLGASGPVLVDFWAEWCGPCRMIAPALEEI
                     SNELGDKVTVAKLNIDDNPDVPARYGVRGIPTMLLFKDGQPVAQKVGAAPRSQIQQWL
                     EGNL"
     gene            complement(7044..10472)
                     /gene="addA"
                     /locus_tag="VHN55_05860"
     CDS             complement(7044..10472)
                     /gene="addA"
                     /locus_tag="VHN55_05860"
                     /inference="COORDINATES: protein motif:HMM:TIGR02784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000724 - double-strand break repair via
                     homologous recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair helicase AddA"
                     /protein_id="HEX2803492.1"
                     /translation="MSARYRPLPRLEGAQASAADPQAHAALSASAGTGKTEVLTARVL
                     LLLLQGAAPESILCLTFTKAAAAEMANRIGARLAAWVRLKNTDLATDLLNLRAINDPP
                     TVRHARQLFARVLDCPGGLKIQTIHAFAQSLLAAFPVEAEIAPGFEPIEGRAEQELVR
                     RTLANLVADAEISGNGQLVADIQCLSRRLGEGSAVDYLRQCASRHQALAAFGPPETIE
                     PVVRRMMRLPEGSVEDYLANRCSDDGFDCDLLRAIAAANRTWGKPTGMGIVEKVERWL
                     AMDSASRAAALPELASIVFTGKGELRKVLAGQRAADVEYERHAERLAQATGELLAIQK
                     GAKLAAEMAAGLRAGQAFAAAYTRAKRSAGVADFDDLIDWTRRLLSTPGMGEWVRYKL
                     DRQVDHILVDEAQDTNAAQWDIIDRLVEEYFSGASESDRRWRTLFTVGDFKQAIYGFQ
                     GTDPEQFERARTKYGSLAEALRRSEQDLEPEGAQAREFRDLSIGASFRSAQPILDVVD
                     SVIRELGSDSLGLKRPPDPHVAHHSERPGKVELWTPFAVEEADEESEEGEERWIEVRD
                     RLYADHLASRIADLVEQAPVLGSTGQKLTPGDILVLVRSRGELASLVVARLFARGVPV
                     AGVDRLHLQEPLAVQDLLAAIRFAVQPNDDLSLANLLVSPLIGWDQDQLRDLAYGRDG
                     SLWRELRERVKESAPFEQAHEALSDLLRIADFTTPSRFLETILSGPMQGRRKLYGRLG
                     LASRDAIDELMNSAIDFERNEIASLDRFLSWFSRGEVDVQRDPGAPANEVRVMTVHGA
                     KGLQSPVVIVADATADPSRLGRTPVILDVQIPEGLAPVLRPKKDERCSPFEELMDEQE
                     RRDLQEHWRLLYVALTRAADRLIVTGVAPKPKKDGSDPRPENCWHRAVQSGMLAIGAA
                     PVEESGSVSLVHASGNDAVAVPQKTTAEVSKIELPSWVTTSAPPEARPPRPLAPSALA
                     EDREPAPPPSLGMKAAAERGTFIHALLERLPDVDESERKGAALRWLERSAGIADPAAR
                     EEIASTVCGLISDSRFSALFGKGSLAEAPIAATLSDGRVIAGTVDRLLVEPGRVLVVD
                     YKTGRAPEQEDSIPAAHRLQMQAYRDALAVIFPDRDIESALLYTAAARFFTLGS"
     gene            10511..10657
                     /locus_tag="VHN55_05865"
     CDS             10511..10657
                     /locus_tag="VHN55_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803493.1"
                     /translation="MSERDDRTDEERRAKFRKAGVAVGIGSAAIVAALLYAGSAKKKK
                     KPRS"
     gene            complement(10660..>11787)
                     /locus_tag="VHN55_05870"
     CDS             complement(10660..>11787)
                     /locus_tag="VHN55_05870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEX2803494.1"
                     /translation="VNEAVWPALPAPDPWLAPKIRANLGLPGLEYRIGLSAHDFASAL
                     GAREVLITRAKRDGRSPTVASRFWLRLDAITGGLPRDRRLERITAALDDPGAPKPVDR
                     PQPCPTADQRPDRISVTAVDRLKADPFAFYAQAILKLRQLDAVDADHTAAWKGSAVHE
                     VFERWLREDECDPDKLRPRAEALLADETIHPMLRALWAPRLLEAIDWMAELERANRAS
                     GRKPLVAEATGEAALAGITVHGRADRIDRLPGGGLAVVDYKSGKPPAKKAIEAGFALQ
                     LGLLGLIARAGGFAEADGDPQVFEYWSLVRDRDSFGKCVRADKDVEADQFLADACRNF
                     AEAAEKWLTGTEPFTAKLNPAYAPYGDYDQLMRLEEWYGRK"
BASE COUNT         1930 a         3878 c         3765 g         2214 t
ORIGIN      
        1 aaccccgacg gccgcattgc ctccgccgga tggcgctacg agacgctttc ggaccagctc
       61 gataccttct tccgccagat cgatgccgac gtggtcgagt tgccgcacgc caagcgcggc
      121 cttgggtcgt cgagcctcga agtgacctcc ctgcttcgcc gtgaccagat cgacgtcatc
      181 aacgaggcgt tcgccgagga attcgagacg ttcggctatc cggccgtcta gccctcaagc
      241 gtcgccatca ggctggcatt tccgcccgcg gcggtggtgt cgatgcaggt cacccgctcg
      301 gtggcgaagc gagcgacata gtgcggcccg cccgccttgg ggcccgtccc cgacataccc
      361 tcgccgccga acggctggct ttcgacgacc gccccgatct ggttgcggtt gacgtagagg
      421 ttgcccaccc gagcatgttg ctcgacgaac tcagcggtgg tttcaatccg gctctggagt
      481 ccgagagtca gcccgtaacc ggtgctgttg atctggtcga tcacgccatc cagctcgccc
      541 gccttccagc ggacgatgtg aaggatggga ccaaaattct cctctgtcag ctgcttgaga
      601 ttgtcgatct cgtacatcgc cgggggcacg aaaaagccgt gcgcgtcgag ctcttcgggg
      661 acgtctgcgc gcatgatctt gcgcgcgtgc aattcgagcc aatcgaggtg cctcctgagc
      721 gcctgccgtg cggcggcatc gatcaccgga ccgacgtccg tggtcagctt ccgaggatcg
      781 ccaacggcaa gcgcattcat cgcgcccgcg atcatccgga tcatgtcgtc ggcgacatct
      841 tcctggatga acagcactcg aagcgcggag caacgctgtc ccgcgctttg gaagctggag
      901 gcgaccacgt cacgagtgac ctgctccgga agcgccgatg aatcgacgat catagcattc
      961 tggccgccgg tttcggcgat gaatggaacg attggcccgt cctgcctctc cgcgagcgat
     1021 cttgcgatga tccgcgccgt gtcggtcgag cctgtgaagg cgaccccggc ggtcagcgga
     1081 tgggcggtaa gcgccgcgcc tacccgccca tcgccgggca tcagctggac gatcggtcgc
     1141 ggaattccgg ccttgtgcat caactcgacg gcgaaagcgc cgatcagggg cgtctgctcc
     1201 gcgggcttgg ccatgaccgc attgcccgcg gccaaagcgg ctgcgaccgg cccagtgaag
     1261 atcgccagcg gaaaattcca ggggctaatg cacgtccaca cgccgcggcc gtggagtcga
     1321 agctcgttgc tctctcccgt cgggccgggg agcggcagcg gcgcagaaaa ctggcggcgg
     1381 gcttccgcgg cgtaatagcg caggaaatcg acggcctccc gaacctcgag caccgcgtcg
     1441 ggaagcgtct tgccggcctc gcggatgcaa agagagaaaa acgcctcgcg attctgctcg
     1501 aacaggtctg cggtcttttc cagaagctcc gcacgcgcgt ttcctccgag cgcgtcccaa
     1561 gccggctgcg cgtttgaggc agccgtaata gccctgtcga ttgcgccatc ggtggcctcg
     1621 ttcgcaacgc cgacctcgat tcgatcgtcg tgcggcgacg tgatccggcg gatcgggtgc
     1681 tcgcccctgg accgctcggt cgggttcgct tcccaattct tgctctccag gtccttcaag
     1741 cgctcgagca ggggctcgcg gaccagcggg tccgacaagt caacgccggc gctgttcttt
     1801 cgtgccgggc cgaaaatctc gttgggcagc ggtatcgccg ggttgcgctt cggctcctgc
     1861 gcctgcagct ccgctaccgg atcgccgacg agcgcctcga ccgagacatg ctcgtcggca
     1921 attcggttga cgaagctcga gttggcaccg ttctcgagca gccgccggac cagataggcg
     1981 agcaagtcct tatggcttcc gaccggcgcg tagatgcgca ccggagtcgg ctcgtcgccg
     2041 aggtcgctct ctagcttcgc cagctcctcg tacagctctt cgcccatccc gtggaggcgc
     2101 tggaactcga atggcgtccc gcccgcgagc gccttcacct gtccgatggt tgtgccattg
     2161 tgcgtggcga acgccggata aatgacgtcg cccgcttcga gcagcagctt cgtgcaggcg
     2221 agataggaaa cgtcggtcgc ggacttgcgc gtgaatactg gataatcggg cagcccgcca
     2281 acctgcgcgg ccttgatctc cgtgtcccaa taggcgcctt tgaccagccg gaccatgaac
     2341 cgccggccat gggcgcgggc aaggtccact gtccactggc acagcggata ggcccgcttc
     2401 tggtacgctt gcaccgcgat gccgagtccg ccccagccat ttgcgaacag cgaaccgtcg
     2461 gcagcgagcg cttcgaaaag gtccatttga agctcgagac ggtcggcctc ctcggcgtcg
     2521 atcgtcaggt gcacgtcggc ggcgctcgcc ttggctgcga gcgcgcgaag gaccggcaag
     2581 atataggctt tcgcttcttc gccgtggctc cattcgtagc gcgggtggag agcggacaac
     2641 ttaaccgaaa tcccgggcga tcgcgcgaac ccgccgctcg cctccttcgc gatcgaatcg
     2701 agtgcgcgaa gataagcctc agcgtagcgc tcggcgtctt cgaaggtacg cgccgcttcg
     2761 ccgagcatat cgaaactgtg ggtcagcccg tggcggcgtt cgggagcggc cctcttcatc
     2821 gcttcgccaa tcgtccggcc gaacacaaac tggcgtccga ggatccgcat cgcctggttc
     2881 accgcggtcc ggataacggg ctcgccgaga cggccgaccg cacggcccag cgcggcccgc
     2941 cagttgtctg aacggtcgtg cgcgccttcc agcaccctgc ccgtcaggag cagcgagaaa
     3001 gtcgccgcat tgacgaacgt cgattccgat tcgccgagct tttctgccca gcgcggcttc
     3061 gacagcttgt cagcgatcag ctcgtcggca gtatgcgcgt cgggaatgcg gagcagcgcc
     3121 tcggcaaggc acatcaaggc aatgccttca tcgctcccca gatcataggc atggaggaac
     3181 gcgtccagcc cggccggctt gtgggcgcga acgcctttga ccagcgttcg cgcgatcgac
     3241 gtcgcttcct tcagctgcgc cggatcgagg cgcgcctgct cgaggcgctc gagagcgagc
     3301 ctctcttcgt cgggacgata agcgagccgg acgtgcgttc ggtcgggggg aacggcgccc
     3361 tcagccgccg ccgctacgcc agctggccgt ggcaatgctt gtacttcttg cccgacccgc
     3421 acgggcacgg cgcgttgcgg ctgatcggcg cggtcgcggt ctcgccgtcg cgcggctgcg
     3481 cttcggcggg caggctgggt cgcggcatca ccggcggcag gttggacatg accgctccgg
     3541 tcgcggcgtc gatgtcggcg ctgtcatctt ccccggagaa ggggtcgata tgctgggtga
     3601 tgaaatccgg cagcggcggg agcgccggag caggctcgaa ctgcacattg atcttcatca
     3661 gccgggtcgt gacgtcctcg cggatcgcca gaagcagccg ctcgaacagc aggaaggctt
     3721 cctgcttgta ttcgtcgatc ggcttcctct gcgcatagct gcgaaggtga atgacctgcc
     3781 gcaacgcgtc gagcgtggcc agatggtctt tccagtggtg gtcgagcgtt tggatcagga
     3841 tgttcttctc gatatcggcc cagcccgcct ggtcgacctc cttcagcttc tccgccatgt
     3901 gctcgtcggc catggcttgc agccgctcga tcagcatctc ctgctcgacg gcctcttcct
     3961 ccagccattg ctcgactggc ggctgaagcc cgaagaccgc gtcgatgctg tccttgagcc
     4021 cggcgagatc ccactgctcg gggtaggtcc cggccgggca gtgcgccatg atgattccgg
     4081 cggccgtttc ggcgcgcatg tcggcgatga cgtcgccgac atcctccgaa tccatgatgt
     4141 cggcgcgctg ttcgtaaatg accttgcgtt ggtcgttcat cacgtcgtcg tactcgacga
     4201 cctgcttacg gatgtcgtag ttgcgcgcct cgaccttctt ctgcgcggtc tcgatggcct
     4261 tcgaaatcca cggggagacg atcgcctcgc cgtcctccag gttcttgttc atcagccggg
     4321 cgaacatcgt ctgcggaccg aatatccgga gcaggtcgtc atcgaggctg aggtagaatt
     4381 tggacaggcc cgggtcgccc tggcgccctg agcggccgcg aagctggttg tcgattcgcc
     4441 ggctctcgtg ccgctcggtg cccagaacgt agaggccgcc cgcgtcgagc acctgtcgct
     4501 tctcttcgac gatctcggcg cggattttct ctgcctgcgc ttcatattcg ggagttccgg
     4561 cgaccaggtc cgggaattcg tcgagcattc ggaattcgag gttgccgccg agctggatgt
     4621 cggttccgcg cccggccata ttggtggcga tcgtgaccgc gccgatgcgg ccggcctggg
     4681 cgacgatatg cgcttcctgc tcgtggaagc gggcgttgag cacagagtgc ttgatgccct
     4741 ccttgtcgag atattcggaa agcatctccg acttctcgat tgagacagtg ccgacaaggg
     4801 cgggctgccc tttctcctgc ttcgtcttca gttccttggc gatggccgag aacttgtcgg
     4861 tgatgttctt gtagaattcg tcgtcctcgt cggtgcgctg caccgggaca ttggtcggga
     4921 tggcgaccac gttcatcttg tagatgtcga agaactcggg tgcctcggtc atcgccgtcc
     4981 cggtcattcc ggacagcttg gggtacatcc ggaaatagtt ctggaaggtg atcgaggcga
     5041 gggtctggtt ctcgggctcg atgaacacgc tttccttggc ctcgaccgcc tggtgaagcc
     5101 cgtcggacca gcgccgccct tccatcatcc ggccggtgaa ctcgtcgatg atgacgacct
     5161 tcccgtcctt gacgatataa tcgatgtcct tcttgaacat cacgttggcc ttgagcgcct
     5221 ggttaaggtg gtggaccgtc tgcgtgttga cgatgtcgta gaggttccgg ccttcgatta
     5281 gccccgcttc ctccagcata cgctcggcct tctcggtgcc ttcctcggta agcacgaccg
     5341 accgctgctt ctcgtccttg tcgtaatcct cttcggtgaa cgtcttcacg atcttgtcga
     5401 cgttgatgta gaggtccgac ttatcgtcgg tcggtccgga aatgattagc ggggtgcggg
     5461 cttcgtcgat caggatcgag tcgacctcgt ccacgatggc gaagttgaag ggccgctgga
     5521 ccatctgttc gcgcgtgaac ttcatgttgt cgcgcaggta atcgaagccg aattcgttgt
     5581 tcgtcccgta ggtgatgtcc gagccatagg cctcgcggcg ctgctcgtcg gtcaggttgg
     5641 ggatgatcac cccgaccgtc atcccgagga acgaatagac ctggcccatc caatcggcgt
     5701 cgcggcgtgc gagatagtcg ttgacggtga cgacgtggac gcccttgcct tccagcgcat
     5761 tgagatagac cgccagagtc gcgacgagcg tcttgccctc tccggtcttc atctctgcga
     5821 tttcgccgcg atggagcgcg attccgccga tcatctggac gtcgtagtga cgctggccga
     5881 gggtgcgctt ggccgcctcg cgcaccgtgg cgaacgcttc cggaagcagg tcgtcgagct
     5941 tctggccgtc agcgagacgc tttcggaaga cctcggtctg gccgcggagc tcctcgtcgg
     6001 tgagcgcctc gattcgcggc tcgaatgcgt tgattgcctc gacatatttg ccgaggctgc
     6061 ggacatagcg gtcgtttgcc gatccgaaga tgctcttggc cagtgcggcg aacatggaat
     6121 tcctttaaat gctcatggcg cgcgacggaa cggcgaccac cctcgcccgc gcgcgagcgt
     6181 tgcggcggcg atgtaggaac ggcgccaagg ttagtcaaac acggaggcgt caatgggact
     6241 ggccggcgga tgcatgtgcg gagccgttcg atacgagcta ggcagccaac cgttcgacgc
     6301 gggctggtgc cactgccgca cctgccagct caacagcggc tcgccggcaa tggttttcgc
     6361 gactgttccg gtcggcgatt tccattggac caagggcgcg gaaaaggtcc gctcgatcca
     6421 atcttcgcat ttcggccgcc gcgagttctg cggcgaatgc ggaacgccgt tcctgatgaa
     6481 ggtcgaccat cagccggaaa ccgtcgactt cagcgtcgcg acgctagacg ctcccaacgc
     6541 agtttcgcca gcctatcaca tcttttgggg aagccgggtc gcctggttcg atcccggcga
     6601 tgatcttccg aggttcgaga agttccgtcc cgacacgaga ggcctggagg gtacccggcc
     6661 tccggcctag agattgccct cgagccattg ctggatctgg cttcggggcg cggccccaac
     6721 cttctgggcg accggctggc cgtccttgaa aagcagcatc gtcgggattc cgcgcacccc
     6781 atagcgggcc gggacgtcgg gattatcatc gatgttcagc ttggccaccg taaccttgtc
     6841 gccgagctcg ttcgagattt cctcgagagc cggcgcgatc attcggcaag gcccgcacca
     6901 ctcggcccag aaatccacca gcactggtcc cgaagcgcca agcacatcgc ttgcgaagtt
     6961 ctgatcggtg acggtcttgg tggccatggc ctcggtctcc ttcgaatcgg ctggtggtca
     7021 tatgggcagc gagcgccgcg ccctcaactc cctagcgtaa agaatcgcgc ggcggccgtg
     7081 taaaggagcg cggattcgat gtcccggtcc gggaagatca cggcaagcgc atcgcggtag
     7141 gcttgcatct gcagtcggtg cgcggcggga atcgagtcct cctgctcggg cgcccgtccc
     7201 gtcttgtaat cgacaacgag cactcgcccc ggctcaacca gcaggcgatc gacggtgccc
     7261 gcgatgaccc ggccgtcgga aagcgttgcc gcgatcggcg cttcggcgag cgaacccttg
     7321 ccgaacaagg ccgagaaacg gctgtcggag ataaggccgc acacggtact ggcaatctcc
     7381 tcgcgggcgg cgggatccgc gatccccgcc gatcgctcga gccaacgcag cgccgctccc
     7441 ttgcgctccg actcgtcgac gtcaggcaag cgctcgagaa gagcgtggat gaacgtcccg
     7501 cgttcggctg cggccttcat ccccagcgac ggcggcggag cgggctcccg gtcttcggca
     7561 agcgcggacg gcgccagcgg gcgtggcggg cgtgcctcgg gcggcgcaga agttgtcacc
     7621 cagctgggga gttcgatttt cgacacctcc gcggtcgtct tttgtggcac tgccacagcg
     7681 tcattcccgc ttgcgtgcac gagggaaacg gagccgcttt cctcgacggg ggcggcgccg
     7741 attgcgagca ttccgctctg cactgcgcgg tgccagcaat tttccgggcg cgggtcggag
     7801 ccgtcctttt ttggctttgg cgcgactccg gtgacgatca gccggtcggc agcgcgagta
     7861 agggccacgt acagaagacg ccagtgctcc tgcaggtcgc ggcgctcctg ctcgtccata
     7921 agttcttcga agggcgagca gcgctcgtcc tttttcgggc gaagcaccgg ggccaggcct
     7981 tcaggaatct gcacgtcgag aatgaccggc gttcgcccga gcctcgacgg atccgcggtc
     8041 gcatcggcga cgatgacgac aggcgactgc agccctttcg cgccgtggac cgtcatcacc
     8101 cgcacttcgt tcgcaggcgc tccgggatcg cgctgaacgt ccacctcccc gcgcgagaac
     8161 caggacagga aacggtccag cgaagcgatc tcgttgcgct cgaaatcgat ggcgctgttc
     8221 atcagctcgt cgatggcgtc ccgagatgcg agtccgagac ggccataaag cttcctccgc
     8281 ccctgcatcg gccctgaaag gatcgtctcg aggaaacgcg aaggagtggt gaagtcggcg
     8341 atccgaagca ggtcggacag ggcttcgtgc gcctgttcga aaggggcact ctctttcacc
     8401 ctctccctca attcgcgcca aaggctcccg tcgcggccgt aggccaggtc acgaagctgg
     8461 tcctggtccc agccgatcag cggcgatacg agcaagttgg cgaggctaag gtcgtcgttc
     8521 ggctggaccg cgaagcggat tgcggcgagc aggtcctgca ccgccagcgg ctcctgcaga
     8581 tgcaggcggt cgacgccggc caccggaaca ccccgcgcga aaaggcgagc cacgaccagc
     8641 gacgccagct cgccgcggct tcggacgagc acgagtatgt cgccgggagt caacttctgg
     8701 ccggtcgagc cgagcacagg cgcctgctcg acgagatccg cgattcgcga cgcaagatga
     8761 tcagcgtaga gccggtcgcg tacctcgatc cagcgctcct cgccctcttc cgactcctca
     8821 tcggcctctt cgactgcgaa cggagtccaa agctcgacct tccccggccg ctccgaatgg
     8881 tgggcaacat ggggatccgg cggccgcttg agcccgagcg aatccgaacc gagttcgcga
     8941 atgaccgaat cgacgacgtc gaggatcggc tgagctgagc ggaagctcgc gcctatggac
     9001 aggtcgcgga actcgcgcgc ctgggctccc tccggctcaa ggtcctgctc cgaccgccga
     9061 agcgcttcgg ccagcgatcc atattttgtc cgtgcccgct cgaactgctc cgggtccgtc
     9121 ccctggaagc cgtaaatcgc ctgcttgaag tcgccgacgg tgaacagggt ccgccatctc
     9181 ctgtcggact cgctggcccc gctgaaatat tcttcgacga gcctgtcgat gatatcccac
     9241 tgggcggcgt tggtgtcctg ggcctcgtcg acgaggatgt gatcgacctg ccggtcgagc
     9301 ttgtagcgaa cccactcgcc cattccgggc gtgctcagaa gccgccgagt ccagtcgatc
     9361 aggtcgtcga aatcggcgac cccggcgctg cgcttggccc gggtgtaggc ggccgcgaac
     9421 gcctggccgg cccgcaaccc cgccgccatt tcggctgcca gcttcgcccc cttctggatc
     9481 gccagcagct cgccggttgc ctgcgccagc cgttccgcgt gccgttcata ttcgacatcg
     9541 gcagcacgtt ggccagcgag caccttgcga agctctcctt tcccggtgaa gacgatgctg
     9601 gcgagttcag gcaacgccgc ggcgcgggac gccgaatcca tcgccagcca ccgctcgacc
     9661 ttctctacga ttcccattcc ggtgggcttg ccccaggtgc ggttcgcggc tgcaatggcg
     9721 cggagcaggt cgcagtcgaa accgtcatcg gaacagcgat tcgcgagata gtcctcgacc
     9781 gaaccctccg gcagtcgcat catccgccgg acgaccggtt cgatcgtctc tggcggcccg
     9841 aacgcggcaa gtgcctgatg gcggcttgca cactgccgca gatagtcgac cgcactgccc
     9901 tcaccgaggc ggcggctgag gcattggatg tccgcaacca gctgcccgtt tccggagatt
     9961 tcggcgtctg cgacaaggtt ggccagggtc cgcctgacga gctcctgctc ggcacggccc
    10021 tcgatcggct cgaacccagg agcgatctcc gcttccactg ggaacgcggc gagcagggac
    10081 tgtgcgaagg catgaatggt ctggatcttc agtccgcccg ggcaatccag caccctcgcg
    10141 aatagctggc gtgcgtgcct taccgtcggc gggtcgttaa tcgcgcgaag gttgagaagg
    10201 tcggtcgcaa gatcggtgtt cttgagccga acccaggcgg cgaggcgggc gccgatccgg
    10261 ttcgccatct ccgccgcggc cgccttggtg aacgtcaggc aaaggatcga ttcgggcgcc
    10321 gcgccttgca gcagaagcag gagaacgcga gcggtgagca cttcggtctt gccggtaccc
    10381 gccgaagccg agagcgcggc gtgcgcctgc ggatcggcag cgctggcctg cgcgccttcg
    10441 agccgcggca agggccggta ccgagcgctc atgcttccaa acccgcgccg aaagccatag
    10501 agagcggcga atgagcgaga gagacgacag gacggacgaa gagcgccggg cgaagttcag
    10561 gaaggcgggg gtcgcggtcg gaatcggctc ggcggcgatt gtcgcggcgc tgctctatgc
    10621 cggcagcgcg aagaagaaaa agaagccccg ctcctaactt catttgcggc cgtaccattc
    10681 ttccagccgc atcagctgat catagtcgcc atagggcgcg taggccgggt tgagcttggc
    10741 ggtgaacggc tcggtgccag tcagccattt ttccgcggct tccgcgaaat tgcggcaggc
    10801 gtcggccagg aactggtccg cttcgacgtc cttgtctgcc cgcacgcatt tgccgaagct
    10861 gtcgcgatcg cgcaccagcg accaatattc gaacacctgc ggatcgccgt ccgcctccgc
    10921 gaatccgccc gcccgggcaa tcaggccgag cagcccgagc tgaagcgcga aaccggcctc
    10981 gatcgccttc ttcgccggcg gtttcccgct cttgtaatcg acgactgcaa ggccgccgcc
    11041 gggaaggcgg tcgattcgat ccgcccggcc gtgaacggtg atccccgcca gcgccgcctc
    11101 gccagtcgcc tcggcgacaa gcggcttgcg gccgctggct cggttcgccc gctcgagctc
    11161 ggccatccag tctatcgcct cgagcagccg aggcgcccat aacgccctga gcatcggatg
    11221 gatcgtctca tccgccaaca atgcttccgc tcgcggcctg agcttgtccg gatcgcattc
    11281 gtcctcgcgc agccagcgtt cgaaaacctc gtggaccgca ctgcccttcc acgccgccgt
    11341 atgatcggca tcgaccgcat cgagctggcg aagcttcagg atcgcttggg cgtagaaagc
    11401 gaatgggtcc gcctttagcc gatccaccgc agtcacggag atcctgtctg gccgctggtc
    11461 cgccgtcggg cacggttggg gccggtcgac aggcttcggg gcccccggat cgtcgagcgc
    11521 ggccgtaatg cgctccagcc ttctgtcccg cggcaagcct cctgtgatcg catccagccg
    11581 aagccagaat cgcgacgcaa ccgtcggcga ccgcccgtcg cgtttcgccc gggtgatcag
    11641 cacctcgcgc gctcccaagg cgcttgcgaa atcgtgcgcc gagagcccga tccgatattc
    11701 cagccccggc aatccgaggt tggcccggat cttcggcgcc agccacgggt caggtgcggg
    11761 caaggccggc cacaccgcct cgttgac
//
LOCUS       DATAKH010000144         3174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10690,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000144 DATAKH010000000
VERSION     DATAKH010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3174
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10690"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1579)
                     /gene="argS"
                     /locus_tag="VHN55_05875"
     CDS             complement(<1..1579)
                     /gene="argS"
                     /locus_tag="VHN55_05875"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEX2803495.1"
                     /translation="MSLYAQYSALLDGVLDDLQSEGAIPPNLDRKNVAVEPPRDPAHG
                     DLATNAAMVLAKQARTNPRALAELIGPKLEAVPAVTSVEIAGPGFINLRLSPDSWRDE
                     LVTILREGENYGRSNAGGAERVNVEYVSANPTGPLHMGHCRGAVVGDALARVLEAAGF
                     RVTKEYYVNDAGAQVDTLARSVHLRYREALGEDIGEIPEGMYPGDYLMPIGTELAAEF
                     GDKYAGAPENEWLELFRSRAVAAMIELIKHDLALLGIHHDLFASEAELQKEGAVDRGL
                     ETLRAKGLVYEGVLEAPKGQTPEDWEPVELTLFKSTQFGDDQDRPMKKSDGSWTYFGS
                     DAAYHLRKAESADHLVNIWGADHAGTVKRVQSAVRALTDGRVDLDVKLVQMVRLFRSG
                     EPVKMSKRGGTFVTLADVVREVGKDVVRFMMLTRRSDAPLDFDFAKVVEASKDNPVFY
                     VQYAHARISSLKRKAADAGVSLDAPADLGLLDDEELALVKLAAQYPRTVDSAAMAHEP
                     HRIAFYLYDLAAAFHALW"
     gene            complement(1873..3030)
                     /locus_tag="VHN55_05880"
                     /pseudo
     CDS             complement(1873..3030)
                     /locus_tag="VHN55_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979574.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
BASE COUNT          546 a         1053 c         1021 g          554 t
ORIGIN      
        1 tccacagagc gtggaaggcg gcggcgagat cgtagagata gaaagcgatc cggtgcggct
       61 catgcgccat cgccgcgcta tcgaccgtgc gcggatattg cgccgccagc ttcaccagcg
      121 ccagctcctc gtcatcgagc aggcccaggt ccgctggcgc gtcgagcgaa acgcccgcat
      181 ccgccgcctt gcgcttgaga gagctgatcc gggcatgggc gtactggaca tagaagacgg
      241 gattgtcctt cgacgcctcg accaccttgg cgaaatcgaa gtcgagcggg gcgtccgacc
      301 ggcgggtcag catcatgaac cgcaccacgt ccttgcccac ttcgcgaacc acatcggcta
      361 acgtcacgaa cgtcccgccg cgcttcgaca tcttcactgg ctcaccggaa cggaacaaac
      421 gcaccatctg caccagcttg acgtcgaggt cgacgcggcc gtcggtcagc gcccgaacgg
      481 cggactggac gcgctttacc gtgccggcgt ggtcggcacc ccaaatgttg acgagatggt
      541 cggcgctttc ggccttgcgg agatggtagg cggcgtcgga gccgaaatag gtccagcttc
      601 cgtccgattt cttcatcggc cgatcctggt cgtcgccgaa ctgggtcgac ttgaacaggg
      661 tcagctcgac cggctcccaa tcctcgggag tctgtccctt gggggcttcg agcacgccct
      721 cgtagacgag acccttggcg cgcagcgtct ccagcccgcg atcgaccgcc ccttccttct
      781 gaagctcggc ctcggacgcg aacaggtcat ggtggatgcc aagcagagcg aggtcatgct
      841 tgatcagctc gatcatcgcc gcgacggcgc ggctccggaa tagctccagc cactcgttct
      901 ccggcgcgcc ggcatatttg tcgccgaact cggccgccag ctctgtgccg atcggcatca
      961 gataatcgcc cgggtacatc ccctcgggga tctccccgat gtcctcgccg agcgcctcgc
     1021 gatagcggag gtgcaccgag cgggcgagcg tatcgacctg ggcgccggcg tcgttgacat
     1081 aatattcctt ggtgacccga aagcctgccg cctccagcac gcgcgccagc gcgtcgccga
     1141 cgacggcgcc ccggcaatgg cccatgtgca gcggcccggt cgggttggcc gacacatatt
     1201 cgacgttcac ccgctcagcc ccacccgcat tggagcggcc gtaattctcg ccttcgcgca
     1261 gaatcgtcac caattcgtca cgccaggagt cgggcgacag ccgaaggttg atgaatccgg
     1321 gcccggcgat ctcgaccgac gtcaccgccg gcactgcctc cagcttcggt ccgatcagct
     1381 cggcgagcgc ccgtgggttg gtccgcgcct gcttggcaag aaccatcgcc gcattggtcg
     1441 caagatcgcc gtgcgccgga tcgcgcggcg gctcgaccgc gacgttcttg cggtcgagat
     1501 tgggcggaat cgcgccttcc gactgaagat cgtcaagcac cccgtcgagg agcgccgaat
     1561 attgggcgta gaggctcatg gagcggcggc gttagcgcag ccgtttaggc tcgtcacgta
     1621 ggttgacgtc gcggtcggga aagtccgttc aatgtttggt cggttcatcc agctgctctc
     1681 cgagacagct gtccacaata acggaaacac caaagggaga gtttagcgcg ctgaatatct
     1741 ctagtgcgtc aggttcaacc gcgaacccag ccgatccctt gttcgaccga tagccacaga
     1801 acacgtcgac ggtggcgttg aggccattga gataggcaac atgaggctga acaactcagc
     1861 agacacgccc gctcaaaacc tgtccggcaa ctccacggcg ccgatcagct cctcgtgctg
     1921 tgcaattgcg aagcggtcgg tcattcccgc gatgaagtcg ccgatccggc gcacctgctc
     1981 gaccgggtca tcggaacgcc attccgcgtc gagcaatgac gggtttgagc gataggcgtt
     2041 ggcgaggccg gttacgacgc gctgcgcctc gtcgcggacg gcgacaagct cgggcgcgtt
     2101 gtaaaggctg tcgtagagga agcgcttgag cgccttctcc tgctcggcga acgcgggcga
     2161 gaagcccgcg agctgccgcc ccgccgaacg cacgccgtcg attgtttcaa cgccggtttc
     2221 gctcacctgc cgctcggtct ctgcgatgac gtcgccgacc atggcgccga tcatgtcgcg
     2281 gaccagcgcg cgctgcatct tgtcggctgg aagctcgccg gagcgatcga cgatgtcgcg
     2341 ccagtggcgc tcaaccagcg ccacctcgag gagcgcgtcg aaatcgagaa gtccggcgcg
     2401 gaggccgtcg tcgatgtcgt gattgtcgta cgcaatatcg tccgcaatcg ccgccacctg
     2461 agcctctagc gacggccagc tatccagtgc caggtcgaac tcggcatccg ccgccgccag
     2521 cgcccatccc ggctccctca ccggcccttt gtgttttgcc agaccctcga gagcttccca
     2581 gctgaggttg agcccgtcga agccggccta gggcgtctcc agccgcgtca cgatccgaac
     2641 ggtgtggccg ttgtggtcga agccgccgga gtccgccatc gccgcctcca gcgcgtcctc
     2701 accggcatgg ccgaacggcg gatggccgaa atcgtgggcg aggcaaagca tctccgtgag
     2761 atcctcgttg aggccgagcg cgcgggcgat ggtccggccg atctgcgcga cttcgaggct
     2821 gtgagtcagg ctcacccggt catggtcgcc gtcgggggcg ccgaacacct gagtcttgtg
     2881 gcggaggcgg cggaaggcga ccgagtggat gatccgatcc cggtcgcgct ggaagatgtc
     2941 gcggggaccg cgggggccgc tgtcgctttc cgggtggagc cgcccgcgcg acgagcttgg
     3001 ccgggcggca agcgtggcaa gcaccgtcat tgcggcggct ctattagttc gggagctccc
     3061 tgaccacctg tcccggatgg ctggtccagg tgaaggatcg gatgctttcg ctggtaagcg
     3121 cgtctgaaaa cagccgcgcg tcgcgctggc tgtggaacgg gccaatcaac agcc
//
LOCUS       DATAKH010000145        23372 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21894,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000145 DATAKH010000000
VERSION     DATAKH010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 23372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23372
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21894"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VHN55_05885"
     CDS             complement(<1..283)
                     /locus_tag="VHN55_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020818651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEX2803496.1"
                     /translation="MAGAENSRARLGNLMLVWRFARRYPRQIAGALFFLILSSTATLA
                     IPYGFKRVIDRGFGSGAASPEAVAQAFHYLLMIVVILAAATALRFYFVSW"
     gene            complement(398..2239)
                     /locus_tag="VHN55_05890"
     CDS             complement(398..2239)
                     /locus_tag="VHN55_05890"
                     /inference="COORDINATES: protein motif:HMM:NF041519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2803497.1"
                     /translation="MAYTIINSSNSINNTTNSANALTLGADSSAIIMADGYVLATGSL
                     ATGIYLGGNETTLIVNGFVFGTFDGIRSVGDYAHTTVHGQVAADSTGVRISDGGRLYV
                     SPTGVVSGGYEAVAMNSSTVVNDGTLSGGNQAIQMSSGWLTNNGLMSASSDAIFYVAS
                     GEGYITNTGRIQGDLSTFYDASAETAKLRVDNSGEWNGRLGLTPGDDTVNNTGRITDG
                     VSLGNGNNTLDSRYGFIGGDVTAGNGADTILLGGEDTIILGGGGGDTIDGGAGFDIVS
                     YATSTIGVRVDLLNGIYSDGDAQGDRLSNIEGVYGTQFRDVLIGDNGSNVINGVLGGD
                     KLLGNGGNDTIIMLGGGGKPVINGGAGNDIIQMVSLDSAVYGYAFKANVQVNGGSGYD
                     TLEIGSAPASVFTNVTVVNIERIMVNDGFNYTFTSAQGTVAAGARLWVDGGSLTGANY
                     ISFNGSVETDGAFDFTGGAGRDTVVGGAGADTIAGGGDKDIMTGGGGADTFIYNNWVE
                     STFGQRDKILDFNTAADTFQFDVEVTAVDPMASGSVTSSGDLAALVSGQFGASHAMLV
                     NVTGGSLSGRMLLLVDGNGVAGFQAAGDYVLDVSGIVGTLTVADFIV"
     gene            2558..3787
                     /gene="phaZ"
                     /locus_tag="VHN55_05895"
     CDS             2558..3787
                     /gene="phaZ"
                     /locus_tag="VHN55_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEX2803498.1"
                     /translation="MLYDAYEVQRSFLAGASKMAGLGAGWLTNPANPLAYATTSPLIA
                     ASLEVFAHASAPRGKPAFGLEETVVDGKTVAVREEVVLRKPFGQLKRFVREAVESGPP
                     LLIVAPMSGHYATLLRGTVERMLPGHDVYITDWRDAKLVPISEGSFDLDDYIDYLIEF
                     LETIGEATGERPHVLAVCQPSVPAFAATALMNADKHKFRPKTLTMMGGPVDPRQAPTA
                     VNTLATKRPLSWFEQNVIATVPGIYAGSGRKVYPGFLQLAGFMAMNLGDHLVSHWEMF
                     KHLVVGDDESADLSRGFYDEYRSVCDMTAEFYLQTVDVVFQRHLLPKGKFMHRGRRVD
                     PKAITDTPVLAIEGERDDVSGIGQTKAALDLTPKLAASKKKYFLAPAVGHYGIFNGRK
                     WREKIAPVVEDWIADNS"
     gene            complement(3790..5424)
                     /locus_tag="VHN55_05900"
     CDS             complement(3790..5424)
                     /locus_tag="VHN55_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2803499.1"
                     /translation="MHRSAVHSMRMMIMASAAVVQQNEIAAVPLYDGLGEVHVPVTTV
                     NPQAQRYFDQGLGFAFGFNHTASIAAFREAQRLDPSCALCFWGEAFAYGPNINAAMEP
                     ETNARAFGLARYANWLAAKATPEERALTSAMTKRYSPDSATPREQLDADYADSMLAAA
                     NAFPANDVIALIAAEAAMDTRPWDYWTADKKPNPRIAEAVQLVETVLARNPEHPQGAH
                     LYIHLMENGPDPKIAEAAADRLATPLSPTAGHLVHMPAHIYYRLGRWKDSIRVNVEAA
                     RADEAYLKASGDKGLYRYGYYPHNVHFIVTSAQMSGDMPTAIREAQRLRLILDPTTSA
                     RIAWIQAINAAPYFAAAQFETPGRILAMRPADSRLPYVAGIRHYARATAYALQRNRSG
                     FDREIGRLARLRESSDFKSMTDQGVPAPQLLQLAETVARGRFAMSSGRYDEAVRFFRY
                     ASHQEAQIPYMEPPFWYYPVHQSLGAALYKAGKYAEAREAFTTALTQSPNNGWALYGL
                     AAANRAAGLRAEAATAESALKKVWAGKPGWLRMERL"
     gene            complement(5596..5847)
                     /locus_tag="VHN55_05905"
     CDS             complement(5596..5847)
                     /locus_tag="VHN55_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004207712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803500.1"
                     /translation="MPESNCPLLERIARVLAGSELSSNAEGDNGHAGPDVDRAWRDHL
                     NQAQAVLHTMREPDEAMAAVGDVEMWRNMVEAAIAQKVG"
     gene            complement(5897..6496)
                     /locus_tag="VHN55_05910"
     CDS             complement(5897..6496)
                     /locus_tag="VHN55_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010408156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HEX2803501.1"
                     /translation="MSAVELIALASTVSLLAGWRLYLVTFATGLAMKLGWIALPDQLQ
                     ALDVLANNWVIGIAATGALAEFFADKVAWVDSAWDSIHAIVRPIGGALLSMAIIDGGD
                     PAWQVGSFLLGGGAAFLAHAGKAGARILVNASPEPVSNIAVSTGEDVATGGLLALAIA
                     YPLAAAAIALALVALSLWLVWKARRFLGRLLPPPRARRN"
     gene            complement(6500..7681)
                     /locus_tag="VHN55_05915"
     CDS             complement(6500..7681)
                     /locus_tag="VHN55_05915"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010233363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX2803502.1"
                     /translation="MARDAVIVSTARTPIGKAYRGAFNATLGPTLGSYAVKAAVERAG
                     VDPQEVEDCIMGAALQQGSQSPNIGRLVALRSGLPVSTPGMSVDRQCASGLMAIATAA
                     KQVVIDRQDVIVAGGLESISTVQTAEMRVQPDQELIGMHSAIYMPMLQTAETVAQRYG
                     IARERQDEYALKSQQRTAAAQSEGRLDDEIVPVTTTMAVKDKETGETSMKEITIAKDE
                     GNRPDTTLEGLSQLQPVLGPGTSITAGNASQLSDGSSACVVMEASVAEKRGLQPLGRY
                     VGMAVHGAEPDEMGIGPVFAIPVLLKKFGLTIDDIGLWELNEAFAVQVLYCQDKLGIP
                     EERLNVDGGAISIGHPYGMSGARMTGHALIEGKRRGAKYVVVTMCVGGGMGAAGLFEV
                     V"
     gene            complement(7692..8147)
                     /locus_tag="VHN55_05920"
     CDS             complement(7692..8147)
                     /locus_tag="VHN55_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010174760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX2803503.1"
                     /translation="MPTATLDEIRSRVGQEVGASSWLAIDQGRITAFAEATEDRQFIH
                     VDLEAAARTPFGGTIAHGFLTLSLLSRMAAEAILVPDSSKMIVNYGLDRVRFLAPVRS
                     GKRVRGRFTLDGVDEKTPSQILLRHTVTVEIEGEDKPALSAQWLTLLFT"
     gene            complement(8128..9252)
                     /locus_tag="VHN55_05925"
     CDS             complement(8128..9252)
                     /locus_tag="VHN55_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEX2803504.1"
                     /translation="MNERIVWPSQAWAWLTQNSNELLIGGAVAVALVAVMLILRKVGE
                     AIVRDDPDCRTWRSVVGRVLAKTNLAFMVLAAVEIVARYTEAPPKIAHPLDIAFTIAM
                     ALQAAIWGRELIMGIVARHAGDEVGETALDNARAVIRVLVSIALFAIAGIVILDNVGV
                     NVTALIAGFGIGGIAIGLAAQGIFSDLFAALSILFDKPFRRGDTIRYGDSIGTVERIG
                     LKTTRLRSLNGEQLVMANTKLLDQEIHNFAEGQSRRTALPFGVIYQTSPDKLATIPEI
                     ARAAVDNRTGCAFIRCPMMRFVDSSIDFELLYESVTIDIDVVATDRTAIMLEIIGKFA
                     EAGIDFAYPTQTTFTAAPDGTMVMPYPAHSSALDRADRDS"
     gene            complement(9286..10314)
                     /locus_tag="VHN55_05930"
     CDS             complement(9286..10314)
                     /locus_tag="VHN55_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IB"
                     /protein_id="HEX2803505.1"
                     /translation="MSKQKPKQRLRHSSDAEPGYTRKRIGRHWAYFDEGGNRIADRDT
                     IERLNSIGLPPAYTDAWFCKDSNGHLQATGIDARGRKQYRYHPDFRARADKKKFSSLL
                     EFGNALSKIRSRVDQDLGQRTMSREKVLAAVVKLLDTQYIRVGNDRYAQDNNSFGATT
                     LLCRHVKTDGGKVKMRFNGKSGKKHEKVITDRRLGRIVRKCKELPGQSLFQYVNGEGV
                     PHPITSGDVNEYIREASGGDFTAKHFRTWWASAIAFEKMLEANEARKVSVQTMVEPVA
                     EALGNTVAISRKSYVHPALIAAVKEDPRDPLNGLDLPRKRKWLSSTEVGLLKFLEQKD
                     GGGHKRAA"
     gene            10376..10933
                     /locus_tag="VHN55_05935"
     CDS             10376..10933
                     /locus_tag="VHN55_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HEX2803506.1"
                     /translation="MPDIADSKILIVATDGFEESELFGPREILLGRGAEVRLASPDLK
                     PIQATVHDDPGKTIRPDMRIEDAQAADFDALILPGGVRNPDALRTNKAAIALIRDFDR
                     SGKPIAAICHGPWLLVEADLVNGRTVTGWASIRTDLRNAGGNVVDQAVVVDGNIITSR
                     KPDDVQPFTEAVIEAVQTAKASAPA"
     gene            10958..11275
                     /locus_tag="VHN55_05940"
     CDS             10958..11275
                     /locus_tag="VHN55_05940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803507.1"
                     /translation="MTGRMTFATRLFARREFTLPDFDLQPLEFDADGSSTELLLDRVV
                     EAGTGESNVISLARPLPTAGELHKSIELHLEAARGRDSHDSPPTPAEELRSALAELRR
                     SLG"
     gene            complement(11277..11609)
                     /locus_tag="VHN55_05945"
     CDS             complement(11277..11609)
                     /locus_tag="VHN55_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803508.1"
                     /translation="MMRLAMSPAAAGLLRSLLRRGGVNRDRILLTEFRSTDWQSLTFI
                     GEQHKIRLRIPSPGADEIAAELVNGLEESEFSIPGHVVADVALAGEVERQKDGSVALT
                     IEALTVEE"
     gene            11875..12522
                     /locus_tag="VHN55_05950"
     CDS             11875..12522
                     /locus_tag="VHN55_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HEX2803509.1"
                     /translation="MQSDPRAVLERLCADRGEDFAGLSRMLGRNPAYIQQFVRRGVPR
                     KLKEEERKKLARFFDISESLLGGPPDAETAPAGLVPVKRTLVRASAGPGAYAGEERGG
                     PYFAFDERWLRTLTQSASSKLSIIRVEGDSMAPTLNAGDDILVDLGDCMERLRDGIYV
                     LRADDVLVVKRLAIHPTGRRVTVQSDNPAYPDWPDCDIDAIHCIGRVIWAGRKLG"
     gene            complement(12526..12696)
                     /locus_tag="VHN55_05955"
     CDS             complement(12526..12696)
                     /locus_tag="VHN55_05955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803510.1"
                     /translation="MKPHNKRAGGCFLMGAILLGFLAGLAARDPLLGVWTGLAAGIII
                     AVALWLIDRRRG"
     gene            12833..13042
                     /locus_tag="VHN55_05960"
     CDS             12833..13042
                     /locus_tag="VHN55_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803511.1"
                     /translation="MDAPFISGRPALADAAELIELYGDDAGFEAAVLAEKCRDAGNVA
                     RFCHWRQIERVIVTLSSEEVRGSVH"
     gene            13094..15118
                     /locus_tag="VHN55_05965"
     CDS             13094..15118
                     /locus_tag="VHN55_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX2803512.1"
                     /translation="MRARGGRASLPLACSRNKFTIRTALLLCGAGSAALAHFPAAAQQ
                     SVPPGSADVDPSAPIDPMPDLGVPWPDVGNLPPETSVPDSPDESAAVVTDTAVERRYA
                     IAITGLERIGNSEKLVEAFEDQSALYAERSEEANAAQIQRRSEDDSELLAELLRSQGY
                     YDALVEPVIEPEGAVLRVTLAAEPGEQYRFQSVELPGLEAAGEDSEALRLAFAVKAGD
                     PVVAEDVIAAGLALQVALGEQGFALAETGEQQIIVDHQTRLATLVLPVEPGPVAHFGT
                     IRVTGEPPFSARHIAEMARFKTGDRFERDRVDDLRRALIATGLVASADVRIVPAAADG
                     TVDIEVTLAPAPRRTIAGEFGYGTGEGIKLEASWQDRNFFNPEGALTVRGIAGTREQL
                     AGIEFRRNNFKARDRVLNLQLTASNINFDAYEAKTIRFLGTLERQSNIIWRKRWTWGI
                     GTEFLATDERGVFNDPAVKETKTFLIAALPLNLAYDGTDDLLDPTRGFRTAIHLSPEI
                     SAKGGSFAYAKAQVDASAYYPVTASTVLAGRVRLGSVFGADAPSIAPSRRFYAGGGGS
                     VRGYGYQRVGPRDFENDPVGGKTLTEFSLEARFRLKAFGGNFGIVPFFDGGALTNKVT
                     PTFNNWQFGAGLGVRYYSSFGPIRIDVGTPLNPREGDGRIAVAVSLGQAF"
     gene            15118..19293
                     /locus_tag="VHN55_05970"
     CDS             15118..19293
                     /locus_tag="VHN55_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010407982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEX2803513.1"
                     /translation="MAEAAAVADSGGGPPPYRLKPDWRRRLLQELLALLLGLALLLAL
                     GLFILDTAPGHRWVVDRIAQVETASGLRFKIGRIEGSIFGESKLKNVAILDQNGAFFT
                     SPEVELDWTPGAWLYNKLHVERLHADRATLLRLPKLKPSTKKGPILPGFDIHIGELSI
                     DRLQVDEAVTGKARTGRIRGSADIRSGRALVKLDAAIDGSDRLVLDLDAEPDGDRFDI
                     ELRARSAAGGLVPALVGSKRPLEATITGDGTWKRWNGRAALDMSGRPTARLSLTAREG
                     QFNLSGLLKPSQFLNGKLMRLTAPVVRVSGEASLKNRILDGKLVLGSGSLRAVASGAL
                     DLAGNRFRSVSIGLDLLRPPALFPNMTGRNVRMLITLDGPFSTARYAYRLTSPGVKFD
                     DTGFVDVRAEGRGRLSPWPMRVPLHLQARAITGVGDTASSILANARLDGMLTITPKLI
                     RGEGLDLRSAQVSGKLSLLIDLVTGRFEVLLSGGMRRYFIEGLGIVDVLTDLKVVPGA
                     GGRGTLVTGTGKAWVRRLDNSFFRSLTGGLPRIETDLTRTPDGVLHLSNLQFYSPKLR
                     LSGEGIRRRDGTFHITARSRQAQYGPVRMVLDGDIARPRVELFLERPNETLGLKDVHL
                     VLSPTAAGFDYRADGGSRLGPFTSNGQILMPKGGATTIAVAALDVNGTHASGRLRSDP
                     GGFTGVLDVSGGGLTGTLAFAPVGDAQKIEAHLNASRVSFPGALAVRSGRLDGTIVLG
                     EEQTTLTGVVNARGLELSGISIARLTANANLVNGSGQVRAAFAGRRGASFEFTTLANV
                     SPDQIRLTGRGSVERKALVLEQAAVLTRSGDGWALAPTRVSFGGGRAVVSGNSGSAPT
                     VHARLQSVPLSVLNIAWPGLDMSGRASGSLDYAWKGARSGRLDLTVRGLSRSGLVLAS
                     QPIDLGIAAVLSNDKAGVRAVAVSNGKTIGRAQARFAPLGGGSVMTALMNAPLLAQLR
                     YQGPADTLWRLSGTELFDLTGPAAIGADVRGTLSNPVISGSLKSDSARLESPVTGTVI
                     DRLAVQGRFQGSRLVFSKLSGQTPGGGAIEGSGSVAFSEGQTLLDLSFNASKARLLNR
                     DDVAATVTGPLRVRSAANGGGTISGEFRLDSGRFTLGQASSAAAVPKLDVKHSGLDEA
                     DVIEAAQLHPWKLDIDLAGGNLQVRGLGIRSTWTTDLHVAGFADSPAFTGRADLVRGD
                     YEFAGRTFRLDRGIIRFRGANPPNPLLDIRALAQVQGLDATILVQGTGLKPEISFASN
                     PPLPQDELLSRILFGTSITNLSAPEALQLASAVAALNSGTGSLDPINAIRRAVGLDRL
                     RILPADIATGQKTAVAAGKYIGRKLYVEVITDGQAYSATRVEYEITRWLSVLSTVSTI
                     GRAQASVRISKDY"
     gene            19426..20922
                     /gene="putP"
                     /locus_tag="VHN55_05975"
     CDS             19426..20922
                     /gene="putP"
                     /locus_tag="VHN55_05975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017672356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEX2803514.1"
                     /translation="METGVIISLAAYFILMLAIGLWAWKKSTDDIDGYLLGGRKLSPQ
                     VAALSAGASDMSGWLLLGLPGAAFVAGLSASWIAIGLFIGAFANYLIVAPRLRVHTER
                     TGDAITIPEYFEKRFEDNSHALRVISSVVIVIFFTLYTSSGVVAGGKLFESAFGADYS
                     LGLWLTAGVVVVYTLFGGFLAVSLTDFVQGCIMFVALVLLPAVAFYDLGWEFTGALEA
                     AKPGAFNMMAGMTAATIVSSLAWGLGYFGQPHIIVRFMAVRSVRDVPAMRNIGMSWMG
                     VALIGSVATGLIGATYVLRTGNTLDDPETIFILLSDVLFHPLLTGFLLAALLAAIMST
                     ISSQLLVSSSSLTEDFYRIYLRREASQTELVTIGRISVVLVALVAIFLAYDPENSILD
                     LVANAWAGFGAAFGPIVILSLTWKRMTRNGALAGIVAGAVTVLFWIYAPVLPDGAALS
                     SVLYEIVPGFFACGLAAILVSLAGAPPPESVSRTFEASEAELEAATRD"
     gene            20915..22210
                     /locus_tag="VHN55_05980"
     CDS             20915..22210
                     /locus_tag="VHN55_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2803515.1"
                     /translation="MTDAADGGTPRRLKNIVGGSIGNLVEWFDWYVYAAFAIYFARSF
                     FPAQDPTAELLQAAAVFAVGFVMRPIGAWLMGIYADHKGRKAGLTLSVTLMCTGSLLI
                     AIAPTHAQAGLLSPAILVIARMIQGLSLGGEYGSSATYLSEMAGRQRRGLWSSFQYVT
                     IIGGQLTALAFLVVLQAILTEAQLDAWGWRLAFGAGGVLAIVAFFIRSRLDETLSYKN
                     VAARVDRPRSTSRSLFREHPREAFLVMALTAGGTASFYAYTIYLQKFLVNTSGFDRET
                     ASRIMTAGLACMMLIQPLAGALSDRIGRKPMMIFFGASATLFTYPLFTTLEATRSVGV
                     AFALVMASLVMVTGYTSINAVVKAELFPAHIRALGVALPFAIANTIFGGTAEYVALWL
                     KDAGHERWFYIYISTLSAISLVAYVLMRETKTTSQILED"
     gene            complement(22232..>23372)
                     /gene="glnA"
                     /locus_tag="VHN55_05985"
     CDS             complement(22232..>23372)
                     /gene="glnA"
                     /locus_tag="VHN55_05985"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014075529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEX2803516.1"
                     /translation="CNIVEPSTGELYARDPRSTATRAEAYLKQTGIGDSIFVGPEAEF
                     FMFDDVRFEDGYATSSFRIDDIELPGNSSRDYDGGNLGHRPRAKGGYFPVAPVDSAMD
                     IRAEMVSTMLEMGLPMDKHHHEVAPAQHELGLTYGSLVETADRMQVYKYVVHMVAQAY
                     GKTATFMPKPVAKDNGSGMHVHMSIWNGKKPLFAGNGYAGLSETALYFIGGVIKHARA
                     LNAFTNPTTNSYKRLVPGFEAPVLLAYSSRNRSASCRIPYGAGEKAKRVEFRFPDALA
                     NPYLAYSALLMAGLDGIQNRIHPGDPMDKNLYDLPPQELVDVPTVCGSLREALVSLQN
                     DRAFLTKGDVFSDDQIDAYAELKWEEVMRWETTPSPVEFDMYYSS"
BASE COUNT         4013 a         7512 c         7493 g         4354 t
ORIGIN      
        1 gccacgacac gaagtagaac cgaagcgccg tcgcggcggc gaggatgacg acgatcatca
       61 gcaggtaatg gaaggcttgg gcaaccgctt ccgggctggc agcgccggac ccaaacccgc
      121 ggtcgatcac ccgcttgaag ccgtagggaa tcgccagggt cgcggtcgac gacaggatca
      181 ggaagaacag cgctccggcg atctggcgcg ggtagcggcg ggcgaaccgc cacacgagca
      241 tcagattgcc aagcctggct ctggaatttt cggcgcccgc catcgctgcc gcctagcagc
      301 cgccgcggtt cctctcaacg gcgcttcggt tcctccgaca tcccgttcgt taagcgccct
      361 gggtcattca gtcgtgtgcc cggacctgca tgcgctccta gacgatgaag tctgctaccg
      421 tcagcgttcc gacgatcccc gagacatcga gcacatagtc acccgcggcc tggaagccgg
      481 ccacgccgtt gccatcgacg agcaacagca tccgaccgct cagcgagccc ccggtgacgt
      541 tgacgagcat cgcatgcgag gcgccgaact ggccgcttac cagagcggcg aggtcgcctg
      601 acgaggttac gctgccgctt gccatcgggt cgaccgcggt cacctctaca tcgaactgga
      661 atgtgtctgc agcggtattg aaatcgagaa ttttgtcgcg ctggccaaat gtcgattcga
      721 cccaattgtt gtagatgaag gtatctgcgc ctccgccgcc ggtcatgatg tccttgtccc
      781 cgccgccggc gatcgtatcg gcgccggcgc cgccaacgac ggtgtcgcgg cccgcgccgc
      841 cggtgaaatc gaaggcgcca tcggtttcga cggagccgtt gaagctaatg taattcgccc
      901 cggtgagcga acctccgtcc acccataaac gggcacccgc cgccaccgtc ccctgcgcgg
      961 aagtgaaagt gtagttgaag ccgtcattca ccatgatccg ctcgatgttg accaccgtga
     1021 cattggtgaa gaccgaggcc ggcgcgctgc ctatttcgag ggtgtcgtaa cccgaaccgc
     1081 cattcacctg gacattagcc ttgaacgcgt aaccgtagac tgccgaatcc aagcttacca
     1141 tctggatgat atcgttaccg gcgccgccgt tgatgacagg cttgccccca ccgcccagca
     1201 tgatgatcgt gtcgttgccg ccgtttccga gcagcttgtc accgccgagc accccgttga
     1261 tgacgttgct gccattgtcg ccgatgagca cgtcccgaaa ctgcgtcccg taaacccctt
     1321 cgatattcga caggcgatcg ccctgggcgt cgccatccga atagattccg ttgagaaggt
     1381 cgaccctgac gccgatcgtg ctcgtcgcgt aggagacgat gtcaaatccc gcgccgccgt
     1441 cgatcgtgtc tccaccgccg ccgccgagga tgatcgtgtc ttcccctcca agcaggatgg
     1501 tatcggcacc gttacccgcg gttacgtcgc cgccgatgaa gccgtagcgc gagtcgagcg
     1561 tgttgttgcc attgccgagg ctaacgccgt cagtgatcct gccggtgttg ttgaccgtgt
     1621 cgtcaccggg tgtgagaccg agccggccgt tccattcgcc gctgttatcg acccgaagct
     1681 tggcggtctc cgcagatgca tcgtaaaacg tcgacaggtc gccctgaatc ctgcccgtgt
     1741 tggtaatata gccttccccg ctggcgacgt agaatatcgc atcgctgctc gcagacatta
     1801 gcccattatt ggtaagccag cccgacgaca tctgaatcgc ctggttgccg ccgctcagtg
     1861 ttccgtcatt gaccactgtg ctcgaattca tggcgacggc ctcataaccg ccgctcacga
     1921 cccctgtcgg gctgacatag aggcggccgc catcgctaat ccggactccg gttgaatcgg
     1981 cagcgacctg gccgtgaacc gtcgtatgcg cgtagtcgcc gactgaacgt atcccgtcga
     2041 aagttccaaa gacgaaaccg ttgacgatca gagtcgtctc gttgccacca aggtaaattc
     2101 ccgttgccag cgagccggtt gcaaggacgt agccgtccgc cattatgatt gcgctggaat
     2161 cagcacccag cgtaagcgcg ttcgccgaat tggtcgtgtt gttgatcgag ttgctactgt
     2221 tgatgatggt ataagccatg gtcgcctcgc tgagccgtcg gcgcgtaatt gagcgccctg
     2281 ttgagcaatt cgctacggga caaagtgccc aggcccccga taaagatcag gaaaggacga
     2341 ccggccgacg cgcttttccc cgtgacaggg cgtaatcccc ggttttcatg ctagcaagct
     2401 gaaaagcgac aggaattctt tccgttgtct ggtggatgcg tttcgagaag gtattcggtc
     2461 gttaccggcc gcagcggcga ccatttggcg tggataagtc tgccgcgttg cagcgtaaat
     2521 cttgcgcagg tgcgaaatag gggccacatc ggcatcgatg ctttacgatg cgtatgaagt
     2581 tcagcgctcc tttcttgccg gggccagcaa gatggcgggg ctcggagccg ggtggctcac
     2641 caatccagcc aatccgctgg cctatgcgac caccagtccg ctgatcgcgg ccagcctcga
     2701 agtcttcgct cacgcttccg ctccgcgcgg caagccggcg ttcggcctcg aggagacggt
     2761 cgtcgacggc aagactgtcg cagtccgcga ggaggttgtt ctccgcaagc cgttcggcca
     2821 gctcaagcgc ttcgtccgcg aggcagtgga atccgggccg ccgctgctga tcgtggcccc
     2881 gatgtcgggc cattatgcga ccctgctgcg cggaacggtg gagcggatgc tcccgggcca
     2941 cgacgtttac atcacggact ggcgcgacgc gaagctggtg ccgatcagcg agggcagctt
     3001 cgacctcgac gattatatcg attacctgat cgaattcctg gaaacgatcg gggaagcgac
     3061 tggcgagcgg ccgcacgtgc tggccgtctg ccagccctcg gtgcccgcct ttgcggctac
     3121 ggcgctgatg aacgcggaca agcacaagtt ccggcccaag acgctgacga tgatgggggg
     3181 cccggtcgat ccgcgccagg ccccgacggc ggtgaacacc ttggcaacga agcgcccgct
     3241 aagctggttc gaacagaatg tgatcgccac cgttccgggg atttacgccg gttcgggccg
     3301 aaaggtttat cccggtttcc tgcagcttgc cgggttcatg gcgatgaatc tcggcgacca
     3361 cctcgtcagc cattgggaga tgttcaagca tctcgtcgtt ggtgacgacg aaagcgccga
     3421 cctcagccgc ggcttctacg acgaataccg ctcggtgtgc gacatgacgg cggaattcta
     3481 cctgcagacc gtggacgtgg tgttccagcg gcacctgctt ccgaagggca agttcatgca
     3541 tcgcggccgc agggtcgatc ccaaggcgat cactgacacg ccggtcctgg ccatcgaagg
     3601 cgagcgggac gatgtttcgg gaattggcca aaccaaggcg gcgctcgacc tcacgcccaa
     3661 gctggcggca tcgaagaaga agtattttct cgcacccgcc gtcggccatt acggcatctt
     3721 caacggccgc aagtggcgcg agaaaatcgc tcccgtcgtc gaggactgga tcgccgataa
     3781 cagctagcct cagagccgct ccattcgcaa ccagcccggc ttgcccgccc agaccttttt
     3841 cagggcggac tcggcggtcg ctgcctccgc cctaaggccc gctgcccggt tcgccgcggc
     3901 aagcccatag agcgcccagc cattgttggg cgactgggtc agagcggtcg tgaaggcctc
     3961 gcgcgcctcg gcatatttac cggccttgta gagagccgca ccgagcgact ggtgcaccgg
     4021 ataataccag aaaggcggct ccatataggg gatttgggcc tcctggtggg aggcgtatcg
     4081 gaagaagcgc acagcttcat cgtaacggcc gctgctcatc gcaaagcgcc cccgagccac
     4141 tgtttcggcg agctgtagca gctgcggcgc agggacgccc tgatcggtca ttgacttgaa
     4201 gtcgctgctc tcgcgaagcc gtgcgagccg gccaatctcg cggtcaaaac ctgagcggtt
     4261 gcgctgtagc gcataggcag tcgcccgcgc ataatgacga atgccggcga catagggcaa
     4321 acgcgaatcg gcaggccgca tcgccagtat gcggccggga gtctcgaact gggctgccgc
     4381 gaaataagga gcggcgttga tggcctgaat ccaagcgatc cttgcgctgg ttgtcgggtc
     4441 gaggatcagg cgtagcctct gcgcctcacg gatcgcggtc ggcatgtcgc ctgacatctg
     4501 cgccgacgtg acgatgaagt gcacgttgtg cggataatag ccgtaccggt agagcccctt
     4561 gtcaccgctc gctttgagat aggcctcgtc agcccgcgcc gcttcgacgt tgaccctgat
     4621 cgaatccttc cagcggccaa ggcgataata aatgtgcgcc ggcatatgga ccaagtgtcc
     4681 cgcagtcggc gacagcggcg ttgcgaggcg gtccgccgcg gcttcggcga tcttggggtc
     4741 ggggccattt tccatcaggt ggatgtagag gtgcgcgccc tgcgggtgct cgggattgcg
     4801 agcgagaacg gtctcgacga gttgaactgc ctcggcgata cgcgggttcg gtttcttgtc
     4861 ggcagtccaa taatcccacg gtcgcgtatc catcgccgct tccgccgcga tcagagcgat
     4921 cacatcgttc gcagggaatg cgttcgccgc cgcaagcatt gagtcggcat agtccgcatc
     4981 cagctgctcg cggggtgtcg ccgagtcagg cgagtaacgc ttggtcatcg ccgaagtgag
     5041 cgctcgctcc tcgggcgttg ccttggccgc cagccagttc gcatatcgag cgagcccgaa
     5101 ggcgcgcgca ttggtctccg gctccatcgc agcgttgatg ttcgggccgt aagcgaaagc
     5161 ttcgccccag aaacatagag cacaactcgg atccaggcgc tgggcttcgc ggaacgccgc
     5221 gatcgacgcc gtatgattga agccgaatgc gaagccgagg ccctggtcga aatagcgctg
     5281 agcctgcggg ttcacggtgg tgactggaac gtgcacctcg cctaaaccgt cgtagagcgg
     5341 gactgcggcg atttcgttct gttgaacgac cgctgctgat gccatgatca tcattcgcat
     5401 cgaatgcacg gccgaacgat gcatcgaatc gccgtgcaat tcaggctgtg cccgtggcga
     5461 cgatcctatg cttgcaagcg ctgctgccgc tgccatcaaa gcgaatggac gtgcgaactt
     5521 gcccattccc gcccccattc tgaggagtag gaaagttccg ctagcagatt ttgacgtctc
     5581 tggtcagtgg cggggctatc cgaccttttg cgcgatcgct gcctcgacca tgttgcgcca
     5641 catctcgacg tcgccgactg cggccatggc ctcgtcgggc tcgcgcatcg tgtgaagtac
     5701 cgcctgcgct tggttcaggt ggtcgcgcca cgcgcgatcg acgtcgggtc ccgcgtggcc
     5761 gttgtcgccc tctgcattgc tgctcagctc cgacccggcg aggactcggg caatccgttc
     5821 gagaagtggg caattggatt cgggcatcga agaacctccc tgcgttgcag gttaaaccgg
     5881 cctgtggcgc tgcggttcaa tttcgccggg cacgcggtgg cggaagcagc cggccgagga
     5941 atcgacgcgc tttccaaacc agccacagcg atagtgcaac gagcgccaga gcgatcgcgg
     6001 cagcggcgag cggataggcg atcgcgagcg cgagcagccc gcccgtggcg acatcttcgc
     6061 cggtcgacac ggcgatgttg gagaccggtt ccgggctggc attgaccagg atacgagccc
     6121 ccgccttgcc ggcgtgggcg agaaaggctg cgccgccgcc cagcaggaag ctgccgacct
     6181 gccaggccgg gtcgccgcca tcgatgatcg ccatcgacag caaggcgccg ccgatcggcc
     6241 ggacgatggc gtggatggag tcccaggcgc tgtcgaccca ggcgaccttg tcggcaaaga
     6301 attccgcgag cgccccggtc gccgcgatcc cgatgaccca gttgttggca agcacgtcga
     6361 gcgcctgcag ttggtcgggg agggcgatcc acccgagctt catcgccagg ccggtagcga
     6421 aggtgacgag gtagagccgc cagccggcaa gcaggctgac cgtcgaggcg agcgcgatca
     6481 gctcgactgc gctcattcgc tagacaactt cgaacagccc cgcagcgccc attccgccgc
     6541 cgacgcacat ggtgacgacg acgtatttcg cgccgcggcg cttgccttcg atcaaggcgt
     6601 ggccggtcat tcgtgcgccg gacattccgt aggggtggcc gattgaaatg gcgccgccat
     6661 cgacgttgag ccgctcctcg ggaatcccga gcttgtcctg gcaataaaga acctggaccg
     6721 cgaacgcctc attgagctcc cacagtccga tgtcatcgat ggtaaggccg aacttcttga
     6781 gcaggaccgg gatcgcgaag accgggccga ttcccatttc gtcgggctct gcgccgtgga
     6841 ccgccattcc gacatagcgg ccgagcggct gaaggccccg tttctcggcg accgaagctt
     6901 ccatgacaac gcaggcggag cttccgtcgg aaagctggct tgcattgccg gcggtgatcg
     6961 aagtgcccgg accgagcacg ggctggagct gcgacagccc ttccagagtg gtgtcggggc
     7021 gattcccctc gtccttggcg atcgtgatct ctttcatcga ggtttcgccg gtttccttgt
     7081 ccttgacggc cattgtcgtg gtgaccggca caatttcgtc atcgagcctg ccttcgctct
     7141 gcgcggccgc ggtccgctgc tgcgacttga gcgcatattc gtcctggcgc tcgcgcgcga
     7201 tcccgtaacg ctgtgcgacc gtctcggcgg tctgcagcat cggcatgtag attgccgaat
     7261 gcatgcctat cagctcctgg tccggctgga cccgcatctc cgcggtctgg acggtgctga
     7321 tcgattccag gccgccggcg acgatcacgt cctggcgatc gatgacgacc tgctttgccg
     7381 cggtcgcgat cgccatcagc cccgaagcac actggcggtc gaccgacata ccgggggtcg
     7441 agactggaag gccggaacgg agcgccacga ggcgcccgat gttgggcgac tggctgccct
     7501 gctggagggc ggcgcccatg atgcagtcct ccacttcttg cggatcgact ccggcgcgct
     7561 cgaccgcggc cttgacagcg taggagccga gcgtgggacc gagggtcgcg ttgaaggcgc
     7621 cgcgataggc cttgccgatc ggggttcgtg cggtggaaac gattacggcg tcgcgggcca
     7681 tcggcctctc ctcaggtgaa cagcagtgtc agccattgcg cggaaagcgc gggcttgtct
     7741 tccccctcga tttccacggt gacggtgtgg cgcagcagga tttgactggg cgtcttctcg
     7801 tcgactccgt cgagcgtaaa gcgtccacgc acccgcttgc ccgatcggac cggggcgagg
     7861 aagcgcacgc ggtcgagccc gtaattgacg atcatcttcg acgaatcggg caccaggatc
     7921 gcttcggccg ccatccggga cagaagcgac agggtcagga atccgtgggc gattgtgccg
     7981 ccgaagggcg tgcgggcggc ggcttcgagg tcgacatgga tgaactgccg gtcctccgtc
     8041 gcttcggcga acgccgtgat tcggccctgg tcgatagcaa gccagctcga tgccccgacc
     8101 tcctggccga cacgcgaccg gatttcgtca agagtcgcgg tcggcacggt cgagggcgct
     8161 cgaatgcgca gggtagggca tgaccatcgt cccgtcgggg gcggcggtga aggtggtctg
     8221 ggtgggataa gcgaaatcga tccccgcttc ggcgaacttg ccgatgatct ccagcattat
     8281 cgctgtccgg tcggtcgcga ccacgtcgat gtcgatagtc acgctttcgt agagcagttc
     8341 gaaatcgatg ctggagtcga cgaacctcat catcgggcag cggatgaacg cacacccggt
     8401 tcggttatcg acggcggccc tggcgatctc tggaattgtc gccagcttgt ccggcgaggt
     8461 ctggtagatg actccgaagg gcagggcggt ccttcggctc tgtccctccg cgaaattgtg
     8521 gatctcctga tcgagaagct tggtgttggc catcaccagc tgctcgccgt tgagcgacct
     8581 tagccgggtc gtcttgagcc cgattcgctc gaccgtcccg atgctgtcgc cgtagcggat
     8641 cgtgtcgccg cgccggaacg gcttgtcgaa caggatcgaa agcgccgcga aaaggtcaga
     8701 aaatatgccc tgggcggcaa ggccgatcgc gattccgccg atcccgaagc cggcgattag
     8761 cgcggtgaca ttgaccccga cattgtcgag gatgacgatc ccggcgatcg cgaacaatgc
     8821 gatgctgacc agcacccgga ttacggcgcg ggcattgtcg agcgccgttt ccccgacttc
     8881 gtcgcctgca tggcgggcga caatgcccat gatcagctcg cgcccccaga tcgcagcctg
     8941 gagcgccatt gcgatcgtga acgcgatgtc gagcggatgc gcgatcttgg gtggcgcttc
     9001 ggtgtacctg gcgacgatct cgaccgccgc cagaaccatg aacgcaaggt ttgtcttcgc
     9061 cagcacccgc ccgacgacgg agcgccaagt ccggcaatcg ggatcgtcgc gaacgatggc
     9121 ctcgccaact ttccggagga ttagcatcac cgcgaccagc gccacggcaa cggcgccgcc
     9181 gattagcagc tcgttcgaat tctgcgtcag ccaggcccag gcttgtgacg gccacacgat
     9241 ccgctcattc atggccgccg tcatggccgc tgcggggatt ggaaatcaag cagcgcgctt
     9301 gtggccgccg ccgtccttct gctccaggaa tttcagcagg ccgacttccg tcgaggacaa
     9361 ccatttgcgt ttccgaggca gatcgagacc attgagcgga tcgcgcggat cctccttgac
     9421 cgctgcgata agcgctgggt gaacgtagga cttgcggctg atcgcgacgg tgttcccgag
     9481 cgcctcggcg acaggctcta ccatcgtctg gacgcttact ttacgcgctt cgttggcctc
     9541 cagcattttt tcgaacgcta tcgcgctcgc ccaccaggtc cggaaatgct tggcggtgaa
     9601 gtcgccgccg ctggcttcgc ggatatattc gttgacgtcg ccggaggtga tcgggtgggg
     9661 cacaccctcg ccgttgacgt actggaacag cgactggccg ggcagttcct tgcatttgcg
     9721 aacgatgcgc ccgagccggc gatcggtgat cactttttcg tgcttcttgc cggactttcc
     9781 gttgaagcgc atcttgacct tgcccccgtc ggttttgacg tggcggcaca gcagggtcgt
     9841 ggctccgaag ctgttgttgt cctgtgcata gcgatcgttg ccgacgcgga tgtactgggt
     9901 gtcgagtagt ttcacgacgg ccgcgagcac cttctcgcgc gacatcgttc gttggccaag
     9961 gtcctggtcg actcggcttc ggatcttcga cagcgcattg ccgaactcca gaaggctgga
    10021 gaatttcttc ttgtcggcgc gggcccggaa atcgggatgg tagcggtact gcttgcggcc
    10081 ccgcgcatcg attccggtgg cctggaggtg gccattggaa tccttgcaga accacgcgtc
    10141 cgtataggcc gggggaaggc cgatcgagtt gagccgttcg atggtgtcgc gatcggcgat
    10201 ccggttcccg ccctcgtcga aataggccca gtggcggccg atgcgctttc tggtgtagcc
    10261 cggctcggcg tcgctgctgt gacgcaacct ttgctttggc ttttgttttg acattgggcg
    10321 gttaagcgcc ggcgaggcag ggcggttcct gcaaagatcg agaaggagcg aacgggtgcc
    10381 cgacattgcc gattccaaaa tcctgatcgt ggcgaccgac ggcttcgaag agtcggagct
    10441 gttcggcccg cgcgaaatcc tgctgggccg tggcgccgag gtgcgtctcg cctcgccgga
    10501 cctcaagccg atccaggcaa cagtccacga tgatcccggg aagacgatcc gccccgacat
    10561 gaggatcgag gacgctcagg cggccgattt cgatgcgctg atcctgccgg gcggagtgcg
    10621 caacccggac gctcttcgga cgaacaaggc ggccattgcc ctgatccgcg atttcgaccg
    10681 cagcggaaag ccgatcgccg ccatttgcca tggcccgtgg ctgctcgtcg aagcggacct
    10741 ggtgaacgga cgaaccgtca ccggctgggc atccatccgg accgacctta ggaacgccgg
    10801 cggcaatgtc gttgaccagg cagtggttgt cgacggcaac atcatcacca gccgcaagcc
    10861 cgacgacgtg caaccgttta ccgaggcggt gatcgaagcc gtccagacgg cgaaagcatc
    10921 tgcacccgcc taaccagctg gcaaggttct ctcgataatg accggacgca tgacgttcgc
    10981 gacccgcctc ttcgcccgcc gtgagttcac attgccggac ttcgaccttc agccgctcga
    11041 attcgacgcc gacggttcga gcaccgagct gctactcgac cgcgtcgtcg aagccgggac
    11101 cggcgagtcg aacgtgatct cgctggccag gccgctcccg accgccggcg aacttcacaa
    11161 atcgatcgaa ctccatctgg aggcggcgag aggccgcgat tcacacgaca gtccgccgac
    11221 tccggccgag gagctgcgaa gcgcgcttgc cgagcttcgc cgctccctcg gctaggtcat
    11281 tcctcgacgg tcaaagcctc gatcgtgagc gccaccgatc cgtccttctg ccgctcgacc
    11341 tcgcctgcca gagcaacgtc ggcaaccacg tggccgggga tactgaactc cgattcctcc
    11401 agcccgttaa ccagctcggc ggcgatttca tccgcgcccg gcgaagggat tcgcagccga
    11461 atcttatgtt gctcacctat aaaggttaac gattgccaat ccgttgaacg gaactccgta
    11521 agcaaaatcc tatctcgatt cacgccgcct cggcggagta gcgagcggag caatcctgca
    11581 gcggcagggg acatcgcgag ccgcatcatt ggagcgcctc cagatactcg attacgcgcg
    11641 caaccgtttg aggacgcggt tctctacctt tccgcaaatc gaacacgaag cgcgggtcgc
    11701 cgaccgcatc gcgcccgaat cgagtcgtgg aacccgacgg tgacgtagat atttttcgac
    11761 ttctctaagc aaatgcactc ttattcccca cgtgtcttgc gactcggctg cacatccatt
    11821 cccaatgcat ttcctacttg tctaggcaca tacctacact tatgaaccta cgtcatgcag
    11881 tctgaccccc gtgccgtgct tgagcgcctg tgcgccgacc gcggagagga tttcgccggc
    11941 ttgtcgcgaa tgctcggccg aaaccctgcc tacatccagc agttcgtccg ccgcggcgtc
    12001 ccgaggaagc tgaaggagga ggagcgcaag aagctcgccc gtttcttcga catttcggaa
    12061 tcgttgctcg gcggcccgcc cgatgccgag accgcgccag cgggactggt gccggtcaag
    12121 cggaccctgg tccgcgcgtc cgcaggtccg ggagcctatg ctggcgagga gcggggcggc
    12181 ccctatttcg cgttcgacga gcggtggctt cggactctca cccagtccgc atcctcgaag
    12241 ctgtcgatca tccgcgtcga aggggattcg atggctccga cgctgaatgc cggcgacgac
    12301 atcctcgtcg atctgggcga ctgcatggag cggcttcgcg acgggattta cgtgcttcgc
    12361 gccgacgacg tgctggtggt gaagcggctt gcgatccacc cgaccggcag gcgggtaacc
    12421 gtgcagtcgg acaatcccgc ttaccccgac tggcccgact gcgacatcga tgcgatccac
    12481 tgcatcgggc gagtgatctg ggcaggaaga aagctcggct gaagttcagc cccggcggcg
    12541 gtcaatcagc caaagcgcta cggcgatgat gattccagct gcgaggccgg tccacacgcc
    12601 gagcagcgga tcgcgcgccg ccagccccgc aaggaatccg agcaggatcg ctcccattag
    12661 aaagcagccg ccggcgcgct tgttgtgagg cttcataagc gcgcaatggc agagccgacc
    12721 ggcaagcacc agagcgtccg aaatcggcag cgctggcgat tgagatggct aacgtggcgt
    12781 tgacgacgat tgtcgtcagt cccgaaacgg gtgctggatt aacggtcgcg acatggacgc
    12841 ccccttcata tccggccggc ccgctcttgc cgatgcagcg gagctgatcg agctttatgg
    12901 cgacgacgcc ggttttgagg ccgccgttct cgccgagaag tgccgcgatg ccggcaacgt
    12961 cgcgcgcttc tgccattggc ggcagatcga gcgcgtgatc gttactctga gcagcgagga
    13021 agtgcgcgga agcgttcatt aattcgccgc gccggtctgg cgcggttcat gtccgaccac
    13081 taggctgcag cccatgagag cgcggggtgg acgggcaagc ctgccgcttg cctgcagccg
    13141 gaacaagttc acgattcgca cggcgctgct gctttgcggc gcgggatcgg ctgcgcttgc
    13201 tcactttccg gctgcggccc agcaaagcgt tccaccgggc tcggccgatg tcgatccgtc
    13261 cgctcccatc gacccgatgc ccgacctcgg cgtgccatgg cccgacgtcg gcaacctgcc
    13321 tccagagacc agcgtcccgg acagcccgga cgaatccgcg gcagtggtga ccgacacggc
    13381 cgttgagcgg cgctatgcga ttgcgatcac cggcctcgag cgcatcggca actcggagaa
    13441 actcgtcgaa gcgtttgaag accagtccgc gctgtacgcg gagcggagcg aggaagcgaa
    13501 cgcggcccag atccagcgcc gatccgaaga cgactcagag cttcttgcgg agcttcttcg
    13561 ctctcaaggc tattacgatg ccctcgtcga gccggtaatc gagccggaag gggccgtctt
    13621 gcgggtgacg ctcgccgccg aaccgggcga gcaatatcgg ttccagtcgg tcgagcttcc
    13681 gggtctcgaa gctgccggcg aggattccga agcgcttcgt ctggcgttcg cggtcaaggc
    13741 cggcgaccca gtcgttgccg aggacgtgat cgccgcgggc ctggcgctcc aggtcgcgct
    13801 tggcgaacag ggattcgcgc tcgccgagac gggcgagcag cagatcatcg tcgatcacca
    13861 gactcgactc gcgaccctcg tccttcccgt cgagccgggg ccggtggcgc atttcgggac
    13921 gattcgagtg accggagagc ctccgttcag cgcccggcac attgccgaaa tggcgcggtt
    13981 caagacgggc gaccgctttg agcgggaccg cgtcgacgat ttgcggcggg cgctgattgc
    14041 gaccgggctg gtcgcgtccg ctgacgtcag gatcgtcccg gcggccgctg acggcacggt
    14101 cgacatcgag gtaacgctcg cgcccgctcc acgccgcacg atcgccggcg aattcggata
    14161 cggaaccggg gaaggaatca agctcgaggc cagctggcag gaccgcaact tcttcaaccc
    14221 ggaaggggca ctgacggtcc ggggaatcgc cggcacccgt gagcagcttg ccgggatcga
    14281 gttccggcgc aacaacttca aggcgcggga ccgggtcctc aacctgcagc tgaccgcgag
    14341 caacatcaat ttcgacgcct atgaggcgaa gacgatccgc ttcctcggca cgctcgagcg
    14401 gcaaagcaac atcatttggc gcaagcgatg gacgtggggc atcgggacag agttcctcgc
    14461 gaccgacgag cggggcgtgt tcaacgatcc ggcggtcaag gagaccaaga ctttcctgat
    14521 cgccgcgctg ccactcaatc tggcctatga cgggacggac gatttgctcg atccgacgcg
    14581 cggcttccgc accgccatcc acctcagccc cgaaatttcg gccaagggcg ggtcgttcgc
    14641 ttatgcaaag gcgcaggtcg acgcgagcgc ctattacccg gttacggcaa gcacggttct
    14701 ggcgggcagg gttcgccttg gcagcgtttt cggcgccgat gcaccctcga tcgccccgtc
    14761 gcggcgcttc tacgcgggcg gtggcggatc ggtccgcggc tacggctacc agcgcgtcgg
    14821 gccgcgcgat ttcgagaacg atcccgtggg cggcaagacg ctgacggaat tctcgctcga
    14881 ggcacggttc cggctgaagg cattcggcgg gaatttcgga atcgtcccct tcttcgacgg
    14941 cggggccctg accaacaagg tgactccgac cttcaacaac tggcagttcg gagcaggcct
    15001 gggggtgcgc tattactcca gcttcgggcc gatccgcatc gatgtcggga cccccctcaa
    15061 cccgcgtgaa ggcgacgggc gaatcgcggt tgcggtttcg ctggggcagg cattctgatg
    15121 gccgaagccg ccgccgtcgc ggacagcgga ggcggaccgc cgccttacag gctgaaaccg
    15181 gattggcggc gccgcctcct gcaggagctg ctggcgctgc ttctcggcct tgctttgctg
    15241 ttggcgctcg gactgttcat cctcgacacc gctcccggtc accgctgggt cgttgaccga
    15301 atcgcccagg tcgagaccgc gtccggactc cgttttaaga tcggtcgcat cgaaggttcg
    15361 atcttcggcg aatccaagct gaagaacgtc gccatcctcg atcagaacgg cgccttcttt
    15421 acctcgccgg aggtcgagct cgactggact cccggagcct ggctttacaa caagctccac
    15481 gtcgagcggc ttcacgccga tcgggcaaca ttgcttcggc tgcccaagct caagccgagc
    15541 acgaagaagg ggccgatcct tcccggcttc gacatccata taggcgagct gtcgatcgac
    15601 cgcctccagg tcgacgaagc ggtcaccggc aaggcccgga cgggccgcat tcgcggaagc
    15661 gccgacatcc gctccggaag ggcgctggtg aagctcgacg ccgcgatcga cggctccgac
    15721 cgcttggtgc tcgatctcga tgccgagcct gacggagacc gtttcgacat cgagcttcgg
    15781 gcccgttcgg cggcgggcgg gctggtcccg gcgctggtcg gatcgaagcg gccgctcgag
    15841 gcgacgatca ccggcgacgg cacctggaag cgctggaacg ggcgcgccgc gctcgacatg
    15901 tccggccggc cgacggcgcg cttgtcgctg actgcgaggg aggggcaatt caacctatcc
    15961 gggctgctca agccgtcgca gttcctgaac gggaagctga tgcgcctgac cgcgcccgtc
    16021 gttcgagtgt ccggcgaggc gagcctcaag aaccggatcc ttgacggcaa gctcgtgctt
    16081 ggatccggct cgttgcgtgc ggttgcgagc ggtgctctcg acctcgctgg gaaccgcttc
    16141 cgctcggtca gcatcggcct cgacctgctc cgcccgccag cgctgttccc caacatgacc
    16201 ggccgcaacg tccggatgct gatcacgctc gacggcccgt tttcgacagc gcgttacgcc
    16261 tatcgcctga catcgccggg agtaaagttc gacgacaccg gcttcgtcga cgttcgggcg
    16321 gagggaaggg gacggctttc gccctggccg atgcgggtgc cgctgcacct gcaggcgcgg
    16381 gcgattaccg gcgtaggcga caccgcgagc tcgatcctgg ccaacgctcg gctcgacggg
    16441 atgctgacga tcactccgaa actgatccgt ggcgaagggc tcgaccttcg aagcgctcag
    16501 gtcagcggca agctctcgct cctgatcgac ctcgtcaccg ggcggttcga agtcctcctg
    16561 tccggcggga tgcgccgcta tttcatcgag gggctgggga tcgtcgatgt cctgaccgac
    16621 ctcaaggtcg tccccggcgc gggcggccgc ggaaccctgg tcaccggcac aggcaaggcg
    16681 tgggttcgcc gcctcgacaa cagcttcttc cgcagcctca ccggcgggct tccgcggatc
    16741 gagaccgacc tgacccggac ccccgacggc gttctccacc tcagcaacct gcaattctat
    16801 tcgcccaagc tccggctttc cggcgaaggc attcgccgcc gcgacggcac tttccacatt
    16861 acggcgcgga gccggcaggc gcagtacggc ccggtccgga tggtgctcga cggcgacatc
    16921 gcccggccgc gagtggagtt gttcctcgag cggccaaacg aaactctcgg cctcaaggac
    16981 gtccatctcg tcctctcccc gaccgcggca ggattcgatt atcgagccga cggcggatcg
    17041 cgtcttgggc ccttcacgag caacggccag atcctgatgc cgaagggcgg cgcgaccacg
    17101 atcgcggtcg cggcgctcga cgtcaacgga acccatgcga gcgggcggct tcgctccgac
    17161 cccggcggct ttacgggtgt gctggatgtc tccggcggag gactgaccgg aacgctggct
    17221 ttcgctccgg ttggcgacgc gcagaagatc gaggcgcacc tcaacgccag cagagtcagc
    17281 ttccccggcg ccctggcggt ccgaagcggc cgcctcgacg gaacgatcgt gcttggcgaa
    17341 gagcaaacga cgctgactgg agtcgtcaac gcacgcggac tggaactgag cgggatctcg
    17401 atcgcccgcc tgaccgccaa cgccaacctg gtcaacggca gcggccaggt gcgcgccgcc
    17461 ttcgccggcc gccggggcgc cagcttcgag ttcactacgc ttgccaatgt ttctcccgac
    17521 cagatccgtc tcacgggtcg cgggtcggtc gagcgcaagg cgctggtgct ggagcaggcg
    17581 gcggtgctaa cccgctccgg cgacggctgg gcgctcgccc cgacccgagt gtcgttcggc
    17641 ggcggacgcg ccgtcgtgtc gggcaacagc gggtcggcgc ccaccgtgca cgcgcggctt
    17701 cagtcggtgc cgctgagcgt cctcaatatc gcctggccgg ggctggacat gagcggacgg
    17761 gcaagcggca gcctcgatta tgcgtggaag ggtgctcgct ccggcaggct cgacctcacg
    17821 gtcaggggcc tgagccgctc cgggctggtg ctggcgtcgc agccgatcga cctcggcatt
    17881 gccgccgtgc tcagcaacga caaagccggg gtccgcgctg ttgcagtgag caacggcaag
    17941 acgatcggac gggcgcaggc gcgcttcgct ccactcggtg gcggctcggt catgactgca
    18001 ctgatgaacg cgccgctact ggcgcaactg cggtaccagg gcccggcgga cacgttgtgg
    18061 cgcctttccg ggaccgagct gttcgatctt accgggcccg ccgcgatcgg ggcggacgtc
    18121 cgcgggacgc tttcgaaccc ggtcatcagc ggctcgctca agagcgatag cgctcggctc
    18181 gaaagccccg tcaccggaac cgtaatcgac cgtctcgcag tccagggccg gttccaggga
    18241 tcgaggctcg tcttcagcaa gctttcgggg cagacacccg gaggcggcgc gatcgaggga
    18301 tcgggcagcg ttgccttctc tgaagggcag acgctgctcg acctgtcctt caatgcctcg
    18361 aaggcgcggc tgctcaatcg cgacgatgtc gccgcgaccg ttaccggccc gctccgggtg
    18421 cgctccgcag caaacggcgg cggcaccatt tccggcgagt tccggctcga cagcggccgc
    18481 ttcacgctcg gtcaggcgag cagcgccgcg gcagttccca agctcgacgt caagcacagc
    18541 ggcctcgacg aagccgacgt gatcgaggcg gcgcagcttc atccgtggaa gctcgacatc
    18601 gaccttgccg gcggcaatct gcaggtccgc gggctcggca tccgaagcac ctggacgacc
    18661 gacctccacg tcgccggctt cgcggattcg ccagccttca cagggcgcgc cgatctcgtc
    18721 cgcggcgact atgaatttgc tggccggacg ttccggctcg atcgcggaat catccggttc
    18781 cgcggcgcca atcctcccaa cccgcttctc gacatccggg cactcgcgca ggtgcagggg
    18841 ctcgatgcga cgatcctggt ccagggcacc gggctcaagc cggaaatcag cttcgcgtcc
    18901 aatccgccgc tgccccagga cgagttgctg tcgcggatcc tgttcgggac ctcgatcacc
    18961 aacctgtcgg cacccgaagc gctgcagctc gcttcggcgg tcgccgcgct caacagcgga
    19021 accggcagcc tcgatccgat caacgcaatt cgccgtgcgg tcggcctgga tcggcttcgt
    19081 atcctcccgg cagacatcgc gaccgggcag aaaaccgccg ttgccgccgg caaatatatc
    19141 ggccgcaagc tctacgtgga ggtgatcacc gacgggcagg cttattccgc cacgcgagtc
    19201 gagtatgaaa tcacgcgctg gctgtcggta ctgtcgaccg tatcgaccat cggccgcgcc
    19261 caggccagcg ttcgcataag caaggattac tgacgcccct gagcaaaggc cgggcgaccg
    19321 ctgaccttgc gaacacggcg ccgcatgtgc tggatggcgc gcgggcgact tcgcgcccgg
    19381 ccgacgctcc tgtctcgact ttgcccgaaa ggaacttcgc ccttcatgga aaccggcgtc
    19441 atcatctccc tagctgccta tttcatcctg atgctcgcga tcggcctgtg ggcgtggaag
    19501 aaatcgaccg atgacatcga tggttatctg ctgggcggaa ggaagctgag cccgcaggtg
    19561 gcggcgctgt cggcgggtgc gtcggacatg agcgggtggc tgctgctcgg acttcccgga
    19621 gcggccttcg tcgccggcct cagtgcgagc tggatcgcta tcggcctctt cattggtgct
    19681 ttcgcaaact atttgatcgt tgcgccacgg ctcagggtgc acaccgagcg aaccggcgat
    19741 gcgatcacga ttccggaata tttcgagaag agattcgagg acaacagcca cgcgctgcgg
    19801 gtgatttcgt cggtcgtcat cgtgattttc ttcacgctct acacgtcgtc cggggtcgtc
    19861 gccggcggca agctgttcga gagcgccttc ggtgcagatt actcgctcgg cctttggctc
    19921 accgcgggag tcgttgtcgt ctacacgctg ttcggcgggt tccttgccgt cagcctgacg
    19981 gattttgtcc agggctgcat catgttcgtg gcgctggtgc ttctcccggc tgtcgctttc
    20041 tatgacctgg gctgggagtt cacgggcgcg ctcgaggcgg cgaagccggg cgcgttcaac
    20101 atgatggcgg ggatgacggc agcgacgatc gtgtcgtcgc tcgcctgggg actcggctat
    20161 ttcggccagc cgcacatcat cgtccgcttc atggccgttc gctcggtccg cgacgtgccg
    20221 gccatgcgga acatcggaat gagctggatg ggggtcgcgc tgatcggctc ggtggcgacg
    20281 ggcctgatcg gcgcaaccta cgtgcttcgg accggcaata cgctcgatga tcctgagacc
    20341 atcttcatcc tcctttccga cgtgctcttc catccgctgc tgaccggctt cctgctggcg
    20401 gcgcttcttg cagcgatcat gagcacgatc tcgtcgcagc ttctcgtgtc gtcgtcgtcg
    20461 ctcacagagg atttctaccg gatctacctg cgcagggagg cgagccagac cgagctcgtc
    20521 acgatcggga ggatctcggt cgtccttgtg gcgctcgtcg ccatcttcct cgcttacgat
    20581 ccggaaaatt cgatcctcga tctcgtcgcc aatgcctggg ccggattcgg agcggctttc
    20641 ggaccgattg tgatcctgtc gctcacctgg aagcggatga cccgaaacgg cgcgcttgcc
    20701 ggaatcgtcg ccggcgctgt gacggtgctc ttctggatat atgcgccggt gctgccggat
    20761 ggcgccgcgc tcagctcggt actttacgaa atcgtgcccg gcttcttcgc ctgcggactg
    20821 gccgcgatct tggtcagcct ggccggcgct cctccaccgg agagcgtcag ccgaacgttc
    20881 gaggcaagcg aagcggaact cgaggccgcg acgcgtgact gatgccgcgg acggcggcac
    20941 gccccgccgg ctgaagaaca tcgtcggcgg ctcgatcggc aacctcgtcg agtggttcga
    21001 ctggtacgtc tatgcggcgt tcgccatcta tttcgccagg agcttctttc ctgcgcagga
    21061 cccgaccgcc gagctactgc aggcggcggc ggtgttcgcg gtaggcttcg tcatgcggcc
    21121 tatcggcgca tggctgatgg gcatttacgc cgaccacaag gggcgcaagg cggggctgac
    21181 cctttcggtg accttgatgt gcacgggctc gctgctgatc gcgatcgctc cgacccatgc
    21241 gcaggccgga ctgctgtcgc cggcgatcct ggttatcgcg cggatgatcc agggtttgag
    21301 cctcggcgga gaatatggct cgagcgcgac ctatttgtcg gagatggccg gcaggcaacg
    21361 acgcggcctc tggtccagct tccagtacgt caccatcatc ggcggccagc tgaccgcgct
    21421 tgcgttcctt gtggtcctgc aagcgatcct caccgaagcg cagctcgatg catggggctg
    21481 gcgcctcgct ttcggcgctg gaggcgttct tgccatcgtc gccttcttca tccgcagccg
    21541 gctcgacgag acgctgagct acaagaatgt cgcggcgcgc gttgatcgcc cgcggtcgac
    21601 cagccggagc ctgtttcggg agcatccgcg ggaagcattc ctggtgatgg cgctaaccgc
    21661 cggcggaacg gcctccttct acgcctacac gatctacctg cagaaattcc tggtcaacac
    21721 gagcggcttc gaccgtgaaa ccgcgtcgcg gatcatgacc gcggggctcg cgtgcatgat
    21781 gctgatccag ccgctggccg gcgccttgtc cgaccgcatc gggcgaaagc cgatgatgat
    21841 cttcttcggc gcgagcgcga ccctgttcac ctatcccctg ttcacgacac tggaggcgac
    21901 ccgcagcgtc ggagtcgctt tcgcgctcgt gatggcgagc ctggtgatgg tcaccggcta
    21961 cacgtcgatc aacgcggtcg ttaaggccga gctgttcccc gcccacatcc gcgcgctcgg
    22021 cgtcgcgctg ccgttcgcta ttgccaacac gattttcggc gggacagccg aatatgtcgc
    22081 tctgtggctc aaggacgctg gccacgagcg atggttctac atctatatct cgacgctctc
    22141 ggccatctcg ctggtcgcct atgtgctgat gcgggaaacc aagacgacca gccagatcct
    22201 ggaagattag cgcggacagg ctgcgtgctg ttcagctcga ataatacatg tcgaattcga
    22261 ccgggctcgg ggtcgtctcc cagcgcatca cttcttccca cttgagctcg gcgtaggcgt
    22321 cgatctggtc gtcgctgaag acgtcgccct tggtcaggaa ggcgcggtcg ttctggagac
    22381 tgacgagcgc ctcgcggagg cttccgcaga ccgtcggcac gtcgacaagc tcctgcggcg
    22441 gcaggtcgta gaggttcttg tccatcgggt cgccgggatg gatgcggttc tggatcccgt
    22501 cgaggccggc catcagcagc gccgaataag cgagataggg gttggcgagc gcgtcgggga
    22561 agcggaattc gacccgcttc gccttctcgc cggcgccgta cgggattcgg cacgaggccg
    22621 agcggttgcg gctggaatag gccagcagca ccggcgcctc gaaaccgggg accaggcgct
    22681 tgtagctgtt ggtggtcggg tttgtgaaag cgttcagcgc gcgagcgtgc ttgatcacgc
    22741 caccgatgaa atagagcgca gtctccgata ggcccgcata gccattgccg gcgaacagcg
    22801 gcttcttgcc gttccagatc gacatgtgga cgtgcatccc gctgccatta tcctttgcaa
    22861 ccggcttggg catgaaggtt gcggtcttgc cgtaggcctg ggcgaccatg tgaacgacat
    22921 atttgtagac ctgcatccga tcggcagtct cgaccaggct tccgtaggtg aggccgagct
    22981 cgtgctgggc cggcgctacc tcgtgatggt gcttgtccat cggcaggccc atttcgagca
    23041 tcgtcgagac catctcggca cgaatgtcca tcgcgctgtc cacgggggcg acggggaaat
    23101 agccgccctt ggcgcgcggc cggtgcccga ggttgccgcc gtcgtaatcg cggctggaat
    23161 tgcccggcag ctcgatgtcg tcgatccgga acgagctcgt cgcatagccg tcctcgaatc
    23221 tgacgtcgtc gaacatgaag aattcggcct cgggcccgac gaagatgctg tcgccgatcc
    23281 cggtctgctt caggtatgcc tcggcgcggg tcgcggtgga gcgcggatcg cgggcataga
    23341 gttcgccggt cgagggctcg acgatattac aa
//
LOCUS       DATAKH010000146         4113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_4971,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000146 DATAKH010000000
VERSION     DATAKH010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4971"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            6..212
                     /gene="rpsT"
                     /locus_tag="VHN55_05990"
     CDS             6..212
                     /gene="rpsT"
                     /locus_tag="VHN55_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEX2803517.1"
                     /translation="MNHARISRIRTFIKDVESALAAGKQKEAAEALKKAQPELARGVS
                     RGVIHKNTASRKLSRLSKRVAALG"
     gene            581..1972
                     /gene="dnaA"
                     /locus_tag="VHN55_05995"
     CDS             581..1972
                     /gene="dnaA"
                     /locus_tag="VHN55_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014848127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEX2803518.1"
                     /translation="MQGGRTDSCQLDDSSVAPLEAAWESIRSGLRRDLGARTFDGWLK
                     PAGLGPLDPDSGTLDIVMPSQFMADWVTSHFGERLALAWKTTLPLVREIRIVASADAP
                     RPAPLLVLEESPAPVIERDPAAPNFDPRYRFESFVVGKANEVAATAARTLATAEQVSF
                     NPLFIHGGTGRGKTHLLHAIGHTFGERFPGRRIVSMSAEKFMVEFIRALKENDTIGFK
                     GRLRSADLLLIDDVQFIAGKDSTQEEFFHTMNEIIGAGKRLVITSDRAPQDLDGIAPR
                     ILSRLSWGLVADINSADFELRYNIIVAKLALLPAVEMPGNVIEFLARRVTSSVRELEG
                     ALNRIAAYAMMTGRDIDVAFVEEVLANVLRANQRRISIDEIQTQVAEHYRIRKAEMTS
                     ARRAREVARPRQVAMYLSKQLTPKSLPDIGRRFGGRDHTTVIHAVRQIEKLRAADSEL
                     DADIRLLTRQLEG"
     gene            complement(1988..2992)
                     /gene="trpS"
                     /locus_tag="VHN55_06000"
     CDS             complement(1988..2992)
                     /gene="trpS"
                     /locus_tag="VHN55_06000"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX2803519.1"
                     /translation="MSETRVVSGIQPTGDLHLGNLLGAILRWVRMQDEAECLFFLADL
                     HALTVSIDPDQLRSSIREMAAALIASGIDPAKSTLFRQSAVPAHSELTWILQGTARMG
                     WLNRMTQFKEKSGKNREGSSVGLFTYPVLQAADILLYRATHVPVGEDQKQHIELTRDI
                     ALKFNTDFDVDLFIPPEPFIGGGAAARVMSLRDGRSKMSKTDPSDMSRVNLTDSDELI
                     AQKIRKAKTDPEPLPDSADSLEDRPEAKNLVGIYAAVAGETVEQVLGRYAGQGFGQFK
                     PVLADALIGLIAPIRKRLEDLRGDSAELDRILEAGAARATELGAPTLEKAKAAVGLTG
                     "
     gene            complement(2989..>4113)
                     /locus_tag="VHN55_06005"
     CDS             complement(2989..>4113)
                     /locus_tag="VHN55_06005"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HEX2803520.1"
                     /translation="SLFSGILNSLTRFTAAAFAPALLNMALIVALLLVPAGGPATATA
                     MAWGVIVGGVVQLALLIIATRRAGIGLKLRPPKMTPRVKELFILILPATLGAGGYYIS
                     QLFYAYFATSLPEGSLVYLSQADRLNQLPLALVGSALGTAILPAISRHIGANEERQAA
                     NVQGRATELAMLLAIPAAVALSVAARPLMTVIFEGGRFTEADAAVSALVLSIIVAGLP
                     AYVMIKVLAPGFFGRKDMWTPLWMTAGSLAIGVSANFVLVPMIGIAALAATTAGAAWI
                     NAAGLYIVLARRGHFRFEGWLIARVAKQILAAAVMGGAILLIRPVFTGFFSGSAGERL
                     IATVALVGTGGIAYFTMAWFIGAMDKEDLLILLRRKKVKA"
BASE COUNT          769 a         1298 c         1330 g          716 t
ORIGIN      
        1 ccacgatcaa tcacgctcgg atcagccgaa tccgcacctt cataaaggac gtcgagtcgg
       61 cacttgcggc cggaaagcag aaggaagcgg ccgaggctct caaaaaggca cagcccgagc
      121 tcgcgcgcgg tgtttcgcgc ggggtcatcc acaagaatac ggcgtcgcgc aaattgtcgc
      181 ggctgtccaa aagggtagca gccctgggct gatacgggct cgcaaaaagc gaccgtaaac
      241 gggccgtcgg ggatccggcg gcccgcttca tttgcgctgt ccaaaaaatg taggaatccc
      301 cgcgattcgc ggcgttagca aaaaattaac cctgcgagat ttggcggttt tgcgtcgatt
      361 tggcggcttt ccggcaaatt tccgtgtcaa cccgatttat ttcacttccg tgaaaaatga
      421 ggtcttgaat ccttccgccg aggctttcaa aaacagcttt ccgaggcgcg aatccgcgcc
      481 ggggcaagag agagaagaga ccattaagct cgcgactcgc atcgcgggca acggggggtc
      541 ttttgtctcg ccaggggcaa gcagagggag gcgctagcca gtgcaaggcg gacggacgga
      601 ctcgtgccag ctcgacgaca gcagcgtcgc accgcttgaa gcagcctggg aatcgattcg
      661 aagcggtctt cgtcgggatc tcggcgctcg caccttcgac ggctggctga agcccgccgg
      721 acttgggccg ctcgatcctg acagcggaac tctcgacatt gtcatgccga gccagttcat
      781 ggccgactgg gtgacgtcgc acttcggcga gcgactggcg ctggcctgga agacgacctt
      841 gccgctcgtt cgcgaaatcc ggatcgtcgc cagcgcggac gctccgcgcc cggcgccgct
      901 cctcgtcctc gaggaaagcc cggcacctgt aatcgagcgc gatccggctg ctccaaattt
      961 cgatccgcgc taccggttcg aaagcttcgt cgtcggcaag gccaacgagg ttgccgccac
     1021 ggccgcccgg acgcttgcca ccgccgagca ggtcagcttc aacccgctgt tcatccatgg
     1081 cggcaccggt cgcgggaaga cccatctcct gcatgccatc ggccacacct tcggcgagcg
     1141 cttcccgggc cgccggatag tgtcgatgtc ggccgagaag ttcatggtcg agttcatccg
     1201 cgccctgaag gaaaacgaca cgatcggatt caaggggcgg cttcgaagcg ccgacctgct
     1261 cctgatcgac gacgtccagt tcatcgccgg caaggattca acccaggaag agttcttcca
     1321 cacgatgaat gagatcatcg gcgccgggaa gcggctggtg ataacctcgg accgggctcc
     1381 gcaggacctg gacggaatcg ctccgcgaat cctctcgagg ctgtcgtggg gcctggtcgc
     1441 cgacatcaat tcggccgatt tcgagctacg ctacaacatc atcgtcgcca agctggcgct
     1501 tcttccggct gtcgagatgc cgggcaatgt gatcgaattc ctcgccaggc gcgtgacttc
     1561 gagcgttcgt gaactcgaag gcgcgctcaa ccggatcgcc gcttatgcga tgatgaccgg
     1621 tcgcgacatc gacgttgcct tcgtcgagga agtgctcgcg aatgtccttc gcgccaacca
     1681 gcggcggatc tcgatcgacg agatccaaac ccaggtcgcc gagcattacc ggatccggaa
     1741 ggccgagatg acctccgccc gccgcgcccg cgaggtggcc cgcccgcgcc aggtggcgat
     1801 gtacctgtcc aagcagctga cgcccaagtc gcttccggac atcggccgaa ggttcggtgg
     1861 ccgcgatcac acgacggtga tccacgcagt tcgccagatc gagaagctcc gagccgccga
     1921 ttctgagctc gacgccgaca tccggcttct gacccgccag ctcgaaggct gagccgactg
     1981 gcccaagtca gccggtaagg ccgactgccg ctttcgcttt ttccagcgtc ggtgcgccca
     2041 gctccgtggc gcgagcggct ccggcttcga gtatccggtc gagctcggcg gaatcgccgc
     2101 gaaggtcttc caaacgcttt cggataggag cgatgaggcc gatcagcgcg tctgcaagca
     2161 ccggcttgaa ctggccgaaa ccctggcctg cgtatcggcc gagcacttgc tcgacggtct
     2221 ccccggccac cgcggcgtaa atgccgacga ggttcttcgc ttcggggcga tcctcgaggc
     2281 tgtcggcact gtcgggtagc ggctcggggt cggttttcgc cttgcgaatc ttttgcgcga
     2341 tcagctcgtc actgtcggtc aggttcacgc ggctcatgtc cgacgggtcg gtcttcgaca
     2401 ttttcgaccg gccgtcgcgg aggctcatga cgcgggccgc ggcgccgccg ccgataaagg
     2461 gctcgggcgg gatgaacagg tcgacgtcga aatcggtgtt gaacttgagc gcgatgtcgc
     2521 gggtgagctc gatatgctgc ttctggtcct cgcccaccgg aacgtgggtt gcccggtaga
     2581 ggaggatgtc tgccgcctgg agaacgggat aggtgaacag cccgacggac gagccctctc
     2641 ggttcttgcc ggacttctcc ttgaactggg tcatgcggtt cagccaaccc atccgcgccg
     2701 tcccctggag gatccaggtc agttccgaat gggcagggac agcgctctgc cggaacaggg
     2761 tcgatttcgc cgggtcgatt ccgctcgcaa tcagagctgc agccatttcg cggatgctcg
     2821 agcgaagctg gtcggggtcg atggatacgg ttagcgcgtg aaggtcggcg aggaagaaca
     2881 ggcattcggc ctcatcctgc atcctcaccc aacgcaggat cgcgcctagc aggttgccga
     2941 ggtggagatc gcccgtcggc tggattcccg agacgactcg cgtttcgctc atgctttcac
     3001 tttcttgcgg cgaagcagga tcagcaggtc ctccttgtcc attgcgccga tgaaccaggc
     3061 catggtgaaa taagcgatgc cgccggtccc gaccagcgcg acggtcgcaa tcagccgctc
     3121 gcccgcggag cccgaaaaga atccggtgaa gaccggccgg atgagcagga tcgcgccgcc
     3181 catgaccgcc gcagccagga tttgcttcgc taccctcgcg atcagccagc cttcgaaacg
     3241 gaaatgaccg cgccgggcga ggacgatgta aagccccgcg gcattgatcc atgccgctcc
     3301 ggccgtggtc gcggcgagag cggcgatgcc gatcatcggg acgaggacga aattggcgct
     3361 gaccccgatc gccagcgagc cggcggtcat ccacagcggg gtccacatgt ccttgcgacc
     3421 gaagaagccc ggcgcgagca ccttgatcat cacataggcg ggaagcccgg cgacgatgat
     3481 cgagagcacc agcgccgata ccgccgcgtc ggcctcggtg aagcggccgc cttcgaaaat
     3541 caccgtcatc agcggcctcg cagcgaccga cagtgcgaca gcggcgggaa tggcgagaag
     3601 catcgccaac tctgtcgcac ggccctggac gttggcggcc tggcgctcct cgttggcgcc
     3661 aatgtggcgg ctgatggccg gcaggatcgc cgttccgagc gcggacccta cgagcgccag
     3721 cggaagctgg ttcagccggt cggcctggct gagatagacg aggctaccct ccggcaggct
     3781 ggtcgcgaaa taggcgtaga agagctggct gatgtaatag ccgcctgctc cgagcgttgc
     3841 gggaaggatg aggatgaaga gttccttcac ccgcggagtc atcttcggtg gccggagctt
     3901 caggccgatg ccggcgcggc gggtggcgat gatgagaagc gcgagttgga cgactccgcc
     3961 gactatcact ccccacgcca ttgcggtcgc ggtagccggg ccgcccgccg gaaccagcag
     4021 caatgcgacg atcagcgcca tgttgagcag ggcgggcgcg aaggcggctg cggtgaaccg
     4081 ggtcagcgag ttgaggatcc cgctgaacag cga
//
LOCUS       DATAKH010000147        17248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_3036,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000147 DATAKH010000000
VERSION     DATAKH010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 17248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17248
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3036"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..191)
                     /locus_tag="VHN55_06010"
     CDS             complement(36..191)
                     /locus_tag="VHN55_06010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803521.1"
                     /translation="MAAPTDLRQQDVRDGRLRTNIGTLASLDDAVAAFTSKGAARGEG
                     AVDQGNI"
     gene            complement(175..1122)
                     /locus_tag="VHN55_06015"
     CDS             complement(175..1122)
                     /locus_tag="VHN55_06015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803522.1"
                     /translation="MIRNGKILALAAAATLVSGCAQTVVNELRHSGGHPGALLDRHFF
                     YAAHSKQVQLLRSAMIVSMAANVGSGYVEAEDADSFIHQLQAASDEINYMAGHIYPVD
                     GKDPCIDLTRDDCDAYALMYESEAPRLEGRIVKLLLASLPRDRATAFLNAAKTGNVMA
                     AAWRALRLAASAVEGAHRGAAVHRSELELRALLVQHAKSQGVGKGCRGGIDWPVETTN
                     DAAKCMNQPLDDLRAADDTPLPHKVPEQAFDAVFAIMRTSCMLLPLNATIEESGREQR
                     KTECAKIAFKPKLRFGGVRGSAGAATDGNAPPPEDGGAD"
     gene            complement(1279..2142)
                     /gene="ygiD"
                     /locus_tag="VHN55_06020"
     CDS             complement(1279..2142)
                     /gene="ygiD"
                     /locus_tag="VHN55_06020"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HEX2803523.1"
                     /translation="MTEPSQSRMPALFIGHGSPMNTLEDNDFTRAWAKLGRALPRPKA
                     LLVVSAHWYIGATAVTAMARPRTIHDFYGFPKELWEFDYPAPGLPELAEEVVEIAKPT
                     WVGLDRDQWGLDHGTWSVLAHLYPDADVPVVQLSINALKPLDYHVELGAKLAPLRDKG
                     VLILASGNVVHNLRRVQWNDPDGAFDWNERFDEATMQQMAEAPGDVLKLAEHADYAMA
                     APTPDHFVPLLYTAGLAMAGEGKADALVRGYAMGSLSMTCYGVGAQLDCETADGAATI
                     PEGVPADQTNM"
     gene            complement(2163..2327)
                     /locus_tag="VHN55_06025"
     CDS             complement(2163..2327)
                     /locus_tag="VHN55_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803524.1"
                     /translation="MQTQNIIERAFQLARTSSDIDGIRKTLRQEGYSNVDAHLAGASI
                     KADLKKQFQG"
     gene            complement(2510..2776)
                     /locus_tag="VHN55_06030"
     CDS             complement(2510..2776)
                     /locus_tag="VHN55_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803525.1"
                     /translation="MKLITTVFVATGLAALAACNASPQEQQADNIEANAEMQADNLEE
                     AADNATTEMGEQSLENQADATREAGENAADATREGADADGNSVD"
     gene            complement(2928..3188)
                     /locus_tag="VHN55_06035"
     CDS             complement(2928..3188)
                     /locus_tag="VHN55_06035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803526.1"
                     /translation="MTTHKQYAGNGSSESHVDRAMRGPTPDNPSLSLKTRLKRAAFFD
                     KREREVAQGKAEPIDPAAGLPEAAAGSGFMLRDSGGEDRPSA"
     gene            complement(3293..3424)
                     /locus_tag="VHN55_06040"
     CDS             complement(3293..3424)
                     /locus_tag="VHN55_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803527.1"
                     /translation="MAKGQKKSNREVRKPKQNKAPKQNASQPSQKEGVVRGLENFKN"
     gene            complement(3525..3683)
                     /locus_tag="VHN55_06045"
     CDS             complement(3525..3683)
                     /locus_tag="VHN55_06045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803528.1"
                     /translation="MQRIGNIFHHRDRDDFGEGDHQEYVESGVRDIALIAGAALLLIG
                     GFVASLIV"
     gene            complement(3801..4379)
                     /locus_tag="VHN55_06050"
     CDS             complement(3801..4379)
                     /locus_tag="VHN55_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase catalytic domain
                     family protein"
                     /protein_id="HEX2803529.1"
                     /translation="MVYNRPLPPADPLAPAVRAPQAPAGIDPQLFQRAKAALDQHRIW
                     YRDKIGVVDFTRPSHEARFHVVDLQNGTVESHLVTHGRGSDPDHCGYLERFSNQPGSY
                     ATSKGTYTTADYYHGKYGLSMRVNGLDHTNDNAMSRAIVIHNAWYAEPDMIAKHGKLG
                     RSEGCFAMSRRSQWDVMRQLAGGRMIYAEKLA"
     gene            4760..4966
                     /gene="rpsU"
                     /locus_tag="VHN55_06055"
     CDS             4760..4966
                     /gene="rpsU"
                     /locus_tag="VHN55_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEX2803530.1"
                     /translation="MQIIVRDNNVDQALRALKKKLQREGVYREMKLRRHYEKPSEKRA
                     RERAAAIRRARKLERKRVEREGAR"
     gene            5008..5538
                     /locus_tag="VHN55_06060"
     CDS             5008..5538
                     /locus_tag="VHN55_06060"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEX2803531.1"
                     /translation="MSVSTLYHPPHHKAALAKFWLAVLFLVTVGVGLAWLGASPLRGE
                     TTASGLVFRTIEAGSGPVITSEDAVLIDYEGRLTDGTVFDSSAASGGPQALAPAQTIP
                     GFAEALTRMRKGGSYRILIPSNLAYGSEPRPGIPANSDLEFDIHVVDVARGAAAMAAR
                     AAPQQQQQQQPQPATE"
     gene            complement(5549..6385)
                     /gene="lepB"
                     /locus_tag="VHN55_06065"
     CDS             complement(5549..6385)
                     /gene="lepB"
                     /locus_tag="VHN55_06065"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014849236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX2803532.1"
                     /translation="MWREIKGLLWVLLAVLAFHSLVAKPFYIPSESMMPTLLKGDRLV
                     VSKYPYGWSWVSASFHIFPHWHGRLFGKMPQRGDIVIVTPPGSNEDYIKRVIGLPGDT
                     VQVRGGRLILNGKMVRWERRRPQMIPVDANVPCGRDPNPLRYDQVFAGYVVTGGDGNQ
                     YCRVPIVRETLPNGVAYDTIDAGRSAGDDYGPVRVGAGEVFLMGDNRDRSADSRFPAG
                     IPSNGLGGPVPWENIGGRAEFITFSLDGTSKLLNPVSWFEALRGGRAGTSLRPAQAQP
                     GE"
     gene            complement(6462..6881)
                     /gene="acpS"
                     /locus_tag="VHN55_06070"
     CDS             complement(6462..6881)
                     /gene="acpS"
                     /locus_tag="VHN55_06070"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEX2803533.1"
                     /translation="MTIIGIGNDLCDIRRIEKSLERFGDRFVRRVFTDVEQAKAARRP
                     YTRAGTLAKRFAAKEAFSKAVGTGFKRGVFMKDIGVVNLPSGQPTLELTGGAKARLDA
                     LAPAGHAVDVHLTLTDEYPWAQAFVMLVARKTGEPVG"
     gene            complement(6878..7603)
                     /locus_tag="VHN55_06075"
     CDS             complement(6878..7603)
                     /locus_tag="VHN55_06075"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016746759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEX2803534.1"
                     /translation="MSRLRLGVNIDHVATIRNARGGDHPDPVRAAHIAADAGADGITA
                     HLREDRRHITDCDIDRLMAEIDLPLNLEMAATEEMLEIALAHRPNAACIVPEKREERT
                     TEGGLDAAGQHNHLAYYVDKLRSADIRVSLFIEPDERQVEAALRLGAPVVELHTGRFA
                     HADGEERARELKRIADCAALAVKNGIEPHAGHGLTFDNVQPVAAIPQLAELNIGHFLV
                     GEAIFTGLDDSVRRMRDLMDAAR"
     gene            complement(7600..8184)
                     /gene="pyrE"
                     /locus_tag="VHN55_06080"
     CDS             complement(7600..8184)
                     /gene="pyrE"
                     /locus_tag="VHN55_06080"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEX2803535.1"
                     /translation="MTDEEILAEFRGADALLEGHFILSSGLRSPRYLQCARLLMDPKR
                     AERMARALAAKLPDDLRRSIDVVVSPAMGGVIVGHEMGRALGVPAMFVERPQGTFEFR
                     RGFRLDPGQRVLLVEDVVTTGLSSREAIAAVESAGGKVVAAASLVDRSNGQADLGVPY
                     TPLIRIDVPAYQPDEVPPELAQIPAVKPGSRTAA"
     gene            8355..9419
                     /gene="coxB"
                     /locus_tag="VHN55_06085"
     CDS             8355..9419
                     /gene="coxB"
                     /locus_tag="VHN55_06085"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX2803536.1"
                     /translation="MKLIGWAIALAAVLATPAAAQTTVATNEAAAPAGNAMAADPQGT
                     GGAAQAEAPPFQYQAPTAGVGEPVAGGLGTQEQVTEVGRDAAAFHDFWLLLICALISV
                     FVLGLLLYAMIRFRRGANPTPSRTSHNTAIEVVWTVIPVLILVAIAIPSIRLMRAQYS
                     FPHADLTVKVIGNQWYWTYQYPDNGGLEIVSNILREPNDPTLKPGDRFRTDADGPPLL
                     AVDERLVIPVGKVVKFIVTSNDVIHAFAIPAFWTKIDANPGQLNETWVKVDRPGVYFG
                     QCSELCGARHGYMPIAVEAVAPEKFAAWVASKGGTMPGATPAAAPAGAQLPPANAEAP
                     ASAESNPPTPSVADRATAND"
     gene            9440..11119
                     /gene="ctaD"
                     /locus_tag="VHN55_06090"
     CDS             9440..11119
                     /gene="ctaD"
                     /locus_tag="VHN55_06090"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEX2803537.1"
                     /translation="MSTIPADALHLEKPGKAHSAEHHDDHKPGFFVRWFMSTNHKDIG
                     TLYLIFAIVAGIIGGSLSGIMRWELMEPGIQVLNGAWPFGPGTASFDEWAHHWNVLIT
                     AHGLIMVFFMVMPAMIGGFGNWFVPLMIGAPDMAFPRMNNISFWLLVPAFILLLGSTF
                     VPGGSGLGSGTGWTVYAPLSTSGSAGPSTDMVIFALHLAGASSILGAINFITTIFNMR
                     APGMTLHKMPLFVWSVLVTAFLLLLALPVLAGAITMLLTDRNFGTTFFDASGGGDPVL
                     YQHLFWFFGHPEVYIMILPGFGMISQIVSTFSRKPVFGYLGMAYAMVAIGVVGFVVWA
                     HHMFTTGMSLDTKMYFTAATMIIAVPTGVKIFSWIATMWGGSLTFETPMLWAIGFIFL
                     FTVGGVTGVVLANGGIDTYMHDTYYVVAHFHYVLSLGAVFSIFAGFYYWFGKMSGRMY
                     NEFLGKVHFFLMFIGVNMVFFPMHFLGLDGMPRRIPDYTPAFSEWNYVATVGFMVTAA
                     GMAVFFVNVFYSLFAGPKAPGNYWGEGATTLEWTLSSPPPFHQFSTLPKID"
     gene            11343..11777
                     /locus_tag="VHN55_06095"
     CDS             11343..11777
                     /locus_tag="VHN55_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEX2803538.1"
                     /translation="MANAIAGNGRPQIHLLASESDLVADLALQTEHRQPLIAAMLLGE
                     IERAELHDLDTLPDDAIRLGSDVSFVDEKTGQLRKVQLVLPAEANIAEDRISILTPMG
                     AALYGLTTGDTIDWPDLDGNHRRIRIARVAQDQSGDRQKAMN"
     gene            11883..12500
                     /locus_tag="VHN55_06100"
     CDS             11883..12500
                     /locus_tag="VHN55_06100"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HEX2803539.1"
                     /translation="MVSAIISALLQVGFVLIVAGAVYFAMRRGQRSFARFVGFYPAPL
                     KAIAAGLALGLAATALILIVPGIADLASERGTVAGDAAKSGVSASVVIALVIAAVFKT
                     ALSEELLFRGLIGKRLIAAAGFQLGNLVQAVLFGLAHLLLLLVPAASVGLVAVMVLFT
                     GTLGWINGWLNERLGDGSILPGWAGHAVANLCAYLGLALMMSQGS"
     gene            complement(12503..13081)
                     /locus_tag="VHN55_06105"
     CDS             complement(12503..13081)
                     /locus_tag="VHN55_06105"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX2803540.1"
                     /translation="MLTRFAMLLAALSAPALAEAQSADPNLVPVSIETSAGRIVVALE
                     TERAPLTAANFLAYVDAGKFDGETFYRAMPYGAGGLIQGGITSDARKLNPPVAFESSD
                     RTGIRNTAGSIAMAALAPGKAQADFFIMTTDIPAFDGPSGFAAFGHVIDGMDVVKAIL
                     ASPVSPTRGEGPMKGQMLDPAVKIVKMERVPG"
     gene            13152..14048
                     /locus_tag="VHN55_06110"
     CDS             13152..14048
                     /locus_tag="VHN55_06110"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEX2803541.1"
                     /translation="MTGPTALPADWRDLYALTKPGVMKLVVFTGLCGLLAAPVMPPAV
                     IGFTAILCIALGAGAAGALNQWYEADLDAKMKRTAKRPLPAGRLDRQTALHFGVGLGV
                     FSVILMDLAANHLAAFLLAASILFYVLVYTVWLKRRTAQNIVIGGAAGAFPPLIGWVA
                     ATGRIELLPVLLFAIIFLWTPPHFWALSLFVRSDYAAAKVPMMPVVAGIEATRRQIAI
                     YSFVMAVAAVAPWPLGLTGWIYGTAGAALGAIFVAFGLSVAANKATEPAGMRPEKRLF
                     AFSIIYLFALFSALVADRWLLA"
     gene            14045..14185
                     /locus_tag="VHN55_06115"
     CDS             14045..14185
                     /locus_tag="VHN55_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013848353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803542.1"
                     /translation="MTDDPKAEDEIIRARQRERARIMAWLLGAFVVLLFLITLAKIGM
                     GK"
     gene            14182..14730
                     /locus_tag="VHN55_06120"
     CDS             14182..14730
                     /locus_tag="VHN55_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014075166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX2803543.1"
                     /translation="MTSTVNRNNRTAALMALMGLAMLGLAFASVPLYRLFCQVTGFGG
                     TTQRAEAAPAVVGTGSMGVRFDANINSALPWKFEPVQEVVRVRPGAPTKILYRATNLV
                     ARPTTGRAVFNVSPLAAGQYFSKIECFCFTEQTLTGGQSVDMPVVFFVDPKLRDDPDL
                     KGVDEITLSYTFYPVESDAAGG"
     gene            14776..15594
                     /locus_tag="VHN55_06125"
     CDS             14776..15594
                     /locus_tag="VHN55_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX2803544.1"
                     /translation="MAATQNHDYHLVNPDPWPIIGAFSSLALFGGAVMWFHENPYGVP
                     VMVAGFVMVLVTMANWWANTIREAHEGYHTPVVSLHLRYGMILFIASEVMFFLAWFWA
                     FYSSALFPSAVEAVGAQWPPKGIEVLDPFGYPLLNTLILLCSGTTVTWAHHSLIHGDR
                     HGLKLGLLLTILLGLLFTSIQAYEYIHAPFDFKGNIYGATFFMATGFHGFHVIVGTIF
                     LIVCWLRAIKGEFTPKQHFGFEAAAWYWHFVDVVWLFLFVSIYVWGGWGAPTHG"
     gene            15605..15964
                     /locus_tag="VHN55_06130"
     CDS             15605..15964
                     /locus_tag="VHN55_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEX2803545.1"
                     /translation="MRQVSPVAGALAGLCPRCKSKTLFAGWARFYDKCRACGLDFSSF
                     NVGDGPAAFLILIIGAILVVAALVVDGRYAPPWWVHSIWIPIGFGLTVFGLRWAKALL
                     LTQEYLHRAREGRIADE"
     gene            15961..16542
                     /locus_tag="VHN55_06135"
     CDS             15961..16542
                     /locus_tag="VHN55_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010214734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEX2803546.1"
                     /translation="MKRVPIVATVLVAAAVAAMIALGVWQLGRAQWKDELIARYQGAQ
                     EMPPIAFPTAPSTGEPPLFRWATAFCLKPVGHRAIAGENRHGESGYAHIVQCATGTEG
                     PGMAVEVGWSKDPRAKFQWPGGPVTGMIAPDREQRMRLVAASAPPGLHPSALPTVRSI
                     PNNHLFYAIQWFLFAGIAVLIYVLALRKRAKPE"
     gene            16539..>17248
                     /locus_tag="VHN55_06140"
     CDS             16539..>17248
                     /locus_tag="VHN55_06140"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2803547.1"
                     /translation="MSGELTTLVAEPWDDWGLIDCGDGRKLERYGSTIVARPEPQAMW
                     APALGEWDPDATFVPGSDEEGGGRWVEHRRVPKQWELSRGAVRFNASLTPFRHLGFFP
                     DMAPQWDWMTERSAGADVLNLFGYTGVGTLLLSGAGARMVHVDASKKSVEQGKDNARL
                     TGFADRPIRWLVDDAAKFTAREVRRGRRYDGILLDPPKFGRGPTGEVWRLEENLAPLL
                     ADCRKLLDGDSGFLVLTV"
BASE COUNT         2752 a         5674 c         5628 g         3194 t
ORIGIN      
        1 cgtcggctac ccgatctcgg taccctaggg gcgactcaaa tgttgccttg gtcgaccgcg
       61 ccttcaccgc gcgccgcgcc ctttgaggtg aacgcggcga cggcgtcgtc gaggctggcg
      121 agggtgccga tgttagtcct cagccgcccg tcgcgcacat cctgctgccg gagatcagtc
      181 ggcgccgcca tcttcgggtg gcggtgcatt cccgtccgtc gccgcgccgg cagagccccg
      241 gacgccgccg aagcgaagct tcggcttgaa cgcgatcttg gcgcactcgg tcttgcgctg
      301 ttccctcccc gactcctcga ttgtcgcgtt gaggggaagc agcatgcacg acgtccgcat
      361 gatcgcgaaa acggcgtcga acgcctgttc gggcaccttg tgcggaagcg gcgtgtcgtc
      421 ggccgcgcgc aaatcgtcga gcggctggtt catgcacttg gccgcgtcat tcgtcgtctc
      481 gaccggccag tcgataccgc cacggcatcc tttgccgacg ccttggctct tggcatgctg
      541 gacgagcagg gcgcgaagct ccagctccga gcggtgaacc gcggctccgc ggtgggcgcc
      601 ttcgaccgcg ctagccgcca ggcgaagcgc gcgccaggcg gcggccatca cattgccggt
      661 cttggccgcg tttaggaagg ccgttgcccg gtcgcgcgga agcgacgcca ggagaagctt
      721 gacgattcgg ccctcaagcc gcggagcctc gctttcgtac atcagcgcat aagcgtcgca
      781 atcgtcgcgg gtcaggtcga tgcacggatc cttgccgtcg accggataga tgtgcccggc
      841 catgtaattg atctcgtcgc tcgccgcctg gagctggtgg atgaagctgt cggcgtcttc
      901 cgcctcgacg tagccggagc cgacgttggc ggccatcgag acgatcatcg ccgaccgcag
      961 cagctggacc tgcttggaat gcgcggcata gaaaaaatgc cggtcgagaa gggcgccggg
     1021 atggccccca ctgtgccgca attcgttgac gacagtttgc gcgcacccgg acaccagggt
     1081 cgcggccgcg gcaagcgcaa ggattttccc attccggatc atgttagccc cccaacttca
     1141 gatccggcgc cgccaagtta ctgcattcat tgacttccgc aagatggatt cgactgctga
     1201 gcgggtggcg ctcccgtttt catgggctgg cccgccaaag tcgtgacgtt cgggggaatc
     1261 gccagcgggg gcagcgcctc acatgttggt ctggtcggca ggcacgcctt cggggatggt
     1321 cgctgcgccg tcggcggttt cgcagtccag ctgggcgccg actccgtagc aggtcatcga
     1381 cagcgacccc atcgcatagc cgcgcaccag cgcgtccgcc ttgccctcgc ccgccatggc
     1441 cagcccggcc gtgtagagca agggcacgaa atggtcggga gtcggcgcgg ccatcgcata
     1501 gtccgcatgc tcggccagct tcagaacgtc gcccggcgct tccgccatct gctgcatcgt
     1561 cgcctcgtcg aaacgctcgt tccagtcgaa cgcgccgtcg gggtcgttcc actgaacgcg
     1621 gcggaggttg tgcacgacat tgccgctggc gaggatcagc acgcccttgt cgcggagcgg
     1681 cgccagcttc gctccgagct caacatgata gtcgagcggc ttgagcgcat tgatgctgag
     1741 ctgcaccacg ggaacgtcgg cgtccggata gaggtgggcg agcacgctcc atgtgccatg
     1801 gtcgaggccc cattggtcgc ggtcgagccc gacccaggtc ggcttggcga tctcgacgac
     1861 ttcctcggcc agctcgggaa gtccgggggc tggatagtcg aactcccaca attccttcgg
     1921 gaagccgtag aaatcgtgga tggttcgcgg ccgcgccatc gcggtcacag cagtcgcgcc
     1981 gatataccag tgcgccgaga ccaccagaag cgccttcggc cgcggaagcg ctcgccccag
     2041 cttcgcccac gcccgcgtga aatcattgtc ctcgagcgtg ttcatcgggc ttccgtggcc
     2101 gatgaacagg gcgggcattc gcgactggga gggttcggtc atgcccggcc cggacagccg
     2161 ccctagccct ggaactgctt cttcaggtcc gctttgatcg aggcaccggc gaggtgggcg
     2221 tcgacgttgg aatagccttc ctggcgaagc gtcttgcgga ttccatcgat gtcgctcgag
     2281 gtccgggcca gctggaaggc gcgttcgatg atgttctggg tctgcatggg agtcctggat
     2341 gtttcgttcc cgtgatgaac ggtcgggcac acccaatcgt tcccccgcgt ttccttacgc
     2401 cttcgccgca ggcgagaatc ggagcgcaag gtcacattcc gcgaggcgga catgcgaacg
     2461 gggcgcccga aaccggacgc cccgcgacgc gtgctctcgc gtttagcctt tagtcgacgc
     2521 tgttgccgtc ggcgtccgca ccctcgcggg tcgcatcggc ggcattctca ccggcttcac
     2581 gggtcgcatc ggcctggttc tccaggctct gctcgcccat ttcggtggtc gcgttgtcgg
     2641 cggcctcttc gaggttgtcg gcctgcatct cggcattggc ctcgatattg tcggcctgct
     2701 gttcctgcgg gctggcgttg catgccgcga gggcggcgag gccggttgcg acaaaaacgg
     2761 tggtgatgag cttcatcttg gtcgtcctgt ttcgtgaaaa gactcaatgc aaagcgatcc
     2821 gcgcgccgaa cggttccgtg cgcgtaatgg aatcgtcccg aacgggcacg attccgccgc
     2881 cccgcgggtg gcgaggcggc ggcgtggggt ttcagtcggg cagggcttca ggcggacggc
     2941 ctgtcttcgc cgcccgagtc gcggagcatg aagccggagc cggcggctgc ctcgggaagg
     3001 ccggcggccg ggtcgatcgg ctcggccttg ccctgggcga cctcgcgctc gcgcttgtcg
     3061 aagaaggcgg cccgcttgag gcgcgtcttc agcgacagcg atgggttgtc gggagtcggg
     3121 ccgcgcatcg cgcggtcgac gtggctctcc gaagagccgt ttcctgcata ttgcttatgg
     3181 gtagtcatcg tggcggcaga acgcccaccc ccgtcggccg gcgcaccgtt atcgccagcc
     3241 cgactgcggc aagcgccggg gcgaacgatg gggattgggc ccgaggcgct gcctagttct
     3301 tgaaattctc gaggccgcgg acgacgcctt ccttttgcga cggctgcgag gcgttctgtt
     3361 tcggcgcctt gttctgcttt ggcttgcgaa cttccctgtt cgacttcttc tggcccttgg
     3421 ccatgtccgg ttcctttgcg ggggcggaaa tgcccctgtc gcgagcttat agcattgccg
     3481 gcgatcgccc gcgcactatt tcgccgccgg cctggcgacg ggcttcagac gatcagcgag
     3541 gcgacgaagc cgccgatgag gagcagcgcc gcgcccgcga tcagggcaat gtcgcgaacg
     3601 ccgctttcca catattcctg gtgatcgccc tcgccgaaat cgtcgcggtc gcgatggtga
     3661 aagatgttgc cgatccgttg catggcgtgc ctccttgcag ccggggccgg cattatacgc
     3721 ctttgaaagc acaaagaaaa ccgccgctcc ggattgccga ggcggcggat cgaaaggcgc
     3781 agggaagggc gagtcggcgc ttaggccagt ttctcggcgt agatcatccg gccgccggcg
     3841 agctggcgca tcacgtccca ctggctcctg cggctcatcg caaagcagcc ctcggagcgt
     3901 ccgagctttc cgtgcttggc gatcatgtcg ggctcggcgt accaggcgtt gtggatgacg
     3961 atcgcccgcg acatcgcatt atcgttggtg tggtcaaggc cgttgacccg catcgagagc
     4021 ccatatttgc cgtggtaata atcggcggtc gtgtaggtgc ccttggaggt cgcataggat
     4081 cccggctggt tgctgaaccg ctcgagatag ccgcaatgat cggggtccga gccgcggcca
     4141 tgggtcacga gatggctttc gacagtgccg ttctgaaggt cgaccacgtg gaatcgcgct
     4201 tcatgcgacg ggcgggtgaa atcgaccacg ccgatcttgt cgcggtacca gattcgatgc
     4261 tggtcgaggg ccgccttggc acgctggaac agttgcggat cgatcccggc cggtgcctgc
     4321 ggagcgcgaa cggccggcgc aagcgggtcg gcaggcggca gcggcctgtt gtacaccatg
     4381 gattgaagac cggcgcagcc ggccgcggac gaaaaggcgg cagcacccgc gccaacggcg
     4441 ccccagcgca gcaattccct tcgattcaaa gacttttgct ccccagctct catgcctctt
     4501 ctatatcagc aagaccgtta accgttgcta actaaaggct aaaggttgcc gcgttcatcg
     4561 cttatcgggc tcggttcacc gcagcttctc gaaaaaatgt cgccttgaac cggcggggtc
     4621 acgctgctaa gggcccgcga ccgccgcagg tccgcttgcg gcgaatagat gtttgcgctc
     4681 cgccgacgac ggagcctcgc tggagcgggg acgttgttgc gccgggagct taattcgaga
     4741 ggagtttgac gggccgttta tgcagatcat cgttcgcgac aacaatgtcg accaggcgct
     4801 gcgcgcgctg aaaaagaagc tgcagcgtga aggcgtctac cgcgagatga agctgcgccg
     4861 gcattacgaa aagccgtcgg agaagcgggc ccgcgagcgc gcggccgcaa tccgccgcgc
     4921 ccgcaagctc gagcgcaagc gcgtcgagcg cgaaggcgcc cgctaaaaca ctttcctgcc
     4981 ggcgggcgcg aggctacggc gaaagccatg tccgttagca ccctctacca cccaccgcac
     5041 cataaggccg cgctggccaa attctggctg gccgtgctgt tcctcgtcac cgtcggagtc
     5101 gggctcgcct ggctcggggc ttcgccgttg cgcggggaaa ccacggcaag cggcctcgtt
     5161 ttccgaacga tcgaggcagg cagcgggccg gtaatcacca gcgaagatgc cgtcctcatc
     5221 gactatgaag gccggctaac cgacggcacc gtgttcgaca gcagcgctgc aagcggcggt
     5281 ccgcaggcgt tggcgccggc gcaaaccatt cccggatttg ccgaggccct gacccgaatg
     5341 cgcaagggcg gctcctatcg aatcctgatc ccttcgaacc tcgcctacgg ttcggagccg
     5401 cgccccggaa tcccggccaa cagcgatctc gagtttgata ttcacgtcgt cgacgttgcc
     5461 aggggcgcag ccgcgatggc ggcccgggca gcacctcaac agcagcagca gcagcagccg
     5521 caacccgcga ccgaatagcg cttatcggtt attcgcccgg ctgagcctgg gctggccgaa
     5581 gcgacgtccc ggcgcggccg ccgcgaagcg cctcaaacca gctcacgggg ttcaacagct
     5641 tcgacgtgcc gtcgagcgag aaggtgatga actcggcgcg accaccgata ttctcccacg
     5701 gcaccggccc gcctaggccg ttgcttggga ttcccgcggg gaagcggctg tcggcgcttc
     5761 ggtcacgatt gtcgcccatc aggaacactt caccggcgcc cacgcggacc ggcccgtaat
     5821 cgtcgccggc gcttcggccc gcgtcgatgg tgtcgtaggc gactccgttg ggcagggtct
     5881 cgcgaacgat gggtacccgg caatattggt tgccgtcacc gccggtgacg acgtagcccg
     5941 cgaaaacctg gtcatagcgc aacggattgg ggtcgcggcc acaggggacg ttggcatcga
     6001 ccgggatcat ctgcggtcgg cggcgctccc accgcaccat cttgccgttg aggatcaggc
     6061 gtccgccgcg aacctggacg gtgtcgcccg gaagcccgat cacgcgcttg atataatctt
     6121 cgttgcttcc cggcggggtg acgatgacga tgtcgccgcg ttggggcatc ttaccgaaca
     6181 gccgtccatg ccagtgcggg aaaatgtgga agctcgccga aacccacgac cagccatagg
     6241 gatatttgct gaccaccagc cggtcgccct tcaatagcgt gggcatcatc gattccgagg
     6301 ggatgtagaa aggctttgcg accaggctgt ggaaggcgag caccgcaagc agcacccaca
     6361 gcaggccctt gatctcgcgc cacagcgccg cggccttgct cggctccgcc ttcccgggcg
     6421 cgggttcggc cggctcggcc tgcgccgttg cggaaatatc gtcagccaac cggctctcca
     6481 gtctttcgtg caacgagcat cacgaacgcc tgcgcccatg gatattcgtc ggtgagtgta
     6541 aggtgaacat cgaccgcgtg gcctgccggg gcaagcgcgt caagccgcgc cttcgctccg
     6601 ccggtcaatt cgagcgtcgg ctggccggag ggcaggttca ccactccgat gtccttcatg
     6661 aagactccgc gcttgaagcc ggtgccgacc gccttggaga acgcctcctt cgcagcgaag
     6721 cgcttcgcca gcgtgccggc gcgggtgtaa ggcctccgcg ccgccttcgc ctgctcgaca
     6781 tcggtgaaga ctcgccggac gaagcggtcg ccgaacctct cgagcgactt ctcgatccgg
     6841 cggatgtcgc acaggtcatt gccgatgccg ataatcgtca ccgcgccgcg tccatcagat
     6901 cgcgcatccg gcgaacgctg tcgtcgaggc cggtgaagat cgcctcgccg acgaggaaat
     6961 ggccgatgtt gagctcggcc agctgcggga tggcggcgac cggctggaca ttgtcgaacg
     7021 tcaggccgtg gccggcatgc ggctcgatcc cgttcttcac cgccagcgcc gcgcagtcgg
     7081 cgatgcgttt cagctcccgc gcgcgttcct caccgtccgc gtgcgcgaag cgcccggtgt
     7141 ggagttcgac gaccggggcg ccgagccgaa gcgccgcttc gacctggcgc tcgtccggct
     7201 cgatgaacag gctcacccgg atgtccgccg agcgaagctt gtcgacataa taagcgagat
     7261 ggttgtgctg tccggcggcg tcgagcccgc cctcggtcgt ccgctcctcg cgcttttcgg
     7321 ggacgatgca ggcggcgttg gggcgatgcg caagcgcgat ctccagcatc tcctcggtcg
     7381 ccgccatttc gaggtttagc ggcaagtcga tctcggccat cagccggtcg atgtcgcagt
     7441 cggtgatgtg gcggcggtcc tcgcgaagat gggcggtgat cccgtcggca ccggcgtccg
     7501 cggcgatatg ggcggcgcgc acggggtccg ggtgatcgcc gccgcgcgcg ttgcggatgg
     7561 tggcgacgtg gtcgatgttg acgccgaggc ggagcctgct cacgcggccg tccggctccc
     7621 gggcttcacg gccgggatct gcgccagctc cggcgggact tcgtcgggct gataggcggg
     7681 gacgtcgatc cggatcagcg gggtataagg cacgccgaga tcggcctggc cgttggaacg
     7741 gtccaccagc gatgcggctg cgaccacctt gccgccggcg gactcgaccg ctgcgatcgc
     7801 ctcgcgcgac gacaggccgg tggtgacgac gtcctcgacc agaagcacgc gctggccggg
     7861 atcgagccgg aagccgcggc ggaactcgaa agtcccttga ggccgttcga cgaacatcgc
     7921 cgggacgccg agcgcgcggc ccatttcatg gccgacgatg actccgccca ttgccggcga
     7981 aaccacgaca tcgatcgacc tgcggaggtc gtccggcagc ttggcagcga gcgctcgcgc
     8041 catccgttcc gcccgcttgg ggtccatcag cagccgcgca cattgcaggt aacgcgggct
     8101 ccttaggccc gaggagagaa tgaaatgccc ctccaggagc gcgtccgcgc cgcggaattc
     8161 cgcaagaatc tcttcgtccg tcatcgccgc cttccaccgc ctgtgcgggg gagcggaata
     8221 ggcgttggcc gcagatgctt caaccgcccc agaagggagt tgagaggata ggaagccgcg
     8281 cctatagagg ccgcaattcg gggccgcgcc taagcggact ctccccgaaa gaacccactg
     8341 tacccggggt gcgaatgaaa ctgattggat gggcgattgc ccttgccgcg gtcctggcca
     8401 cacctgctgc ggcccagacg acggtcgcaa cgaacgaggc tgccgcgccg gccggcaatg
     8461 ccatggccgc ggacccgcaa gggaccggcg gggccgcgca ggcggaagct ccgcccttcc
     8521 aataccaggc cccgaccgcc ggagtcggcg agccggtcgc cggcggcttg ggcacgcagg
     8581 agcaggtgac cgaagtcggc cgcgatgctg cggcgttcca cgatttctgg ctgctcctga
     8641 tctgcgcgct catcagcgtg ttcgtcctcg ggctgctgct gtacgcgatg atccggttcc
     8701 gccggggcgc caatccgact ccgtcgcgca cctcgcacaa caccgcgatc gaggtggtgt
     8761 ggacggtgat tccggtgctg atcctggtcg cgatcgcgat tccctcgatc cggctgatgc
     8821 gggcgcaata ttcgttcccg cacgcggacc tgacggtgaa ggtgatcggc aaccagtggt
     8881 actggaccta tcaatatccc gacaacggcg ggctcgagat cgtctccaac atcctcaggg
     8941 agcctaacga tccgaccttg aagcccggcg accggttccg caccgatgcc gacggtccgc
     9001 cgctcctcgc ggtcgacgag cggctggtga taccggtcgg caaggtcgtg aagttcatcg
     9061 tcacttccaa cgatgtaatc cacgccttcg cgatccccgc tttctggacg aagatcgacg
     9121 ccaaccccgg ccagctcaac gagacctggg tcaaggtcga ccgtccgggc gtctatttcg
     9181 ggcagtgctc cgagctttgc ggagcgcgcc acggatacat gccgatcgcc gtcgaggccg
     9241 tagcgcccga gaagttcgcc gcctgggtcg cctctaaggg cggcacgatg ccgggagcga
     9301 ctcccgccgc cgctccggcc ggggcgcaac ttccaccggc gaacgccgaa gcaccggctt
     9361 ccgccgaatc caatccgccc acgccgtcgg tcgccgaccg agccacggca aacgactgac
     9421 cgagggatcc tagacagtca tgagcaccat tcccgctgac gcgctccacc tcgagaagcc
     9481 gggcaaagcc cactccgccg agcatcacga cgaccacaag ccgggcttct tcgtccgctg
     9541 gttcatgtcg acgaaccaca aggacatcgg aacgctctat ctgatcttcg cgatcgtcgc
     9601 cgggataatc ggcgggtcgc tgtcgggaat catgcggtgg gaattgatgg agccgggaat
     9661 ccaggtgctc aacggcgcct ggccgttcgg ccccggaacc gccagcttcg acgaatgggc
     9721 gcaccactgg aacgtcctga tcaccgcgca cgggctgatc atggtcttct tcatggtcat
     9781 gccggcgatg atcgggggct tcggcaactg gttcgtgccg ctgatgatcg gagcgcccga
     9841 catggcgttc ccgcgaatga acaacatcag cttctggctg cttgtgccgg ccttcatcct
     9901 gcttctcgga tcgaccttcg ttcccggggg cagcggcctt ggcagcggca ccggctggac
     9961 cgtctatgcg ccgctgtcga cctccgggtc ggcgggcccg tcgaccgaca tggttatttt
    10021 cgcgctccac ctggcgggcg ccagctcgat cctcggcgcg atcaacttca tcaccaccat
    10081 cttcaacatg cgcgccccgg gcatgacgct gcacaagatg ccgttgttcg tttggtcggt
    10141 gctggtcacc gccttcctgc tgctgctggc gctgccggta ctcgcgggcg cgatcacgat
    10201 gcttctgacc gaccgcaatt tcgggaccac ctttttcgac gcttcgggcg gcggcgaccc
    10261 cgtgctgtac cagcacctgt tctggttttt cggccacccc gaagtctaca tcatgatcct
    10321 tccgggcttc gggatgatca gccagatcgt ctcgacgttc agccgcaagc ccgtcttcgg
    10381 ctatctcgga atggcttatg cgatggtcgc gatcggggtc gtcggcttcg tcgtctgggc
    10441 gcaccacatg ttcacaaccg gcatgagcct cgacacgaag atgtacttca ccgccgcgac
    10501 gatgatcatc gccgtcccga ccggcgtgaa aatcttcagc tggatcgcga cgatgtgggg
    10561 cggaagcctc acgttcgaga ccccgatgct gtgggcgatc ggcttcatct tcctgttcac
    10621 cgtaggcgga gtgaccggag tcgtgctcgc caacggcggc atcgatacgt acatgcacga
    10681 cacctattac gtcgtcgcgc acttccatta cgtgctgagc ctcggcgccg tgttctcgat
    10741 cttcgccggc ttctattact ggttcgggaa gatgagcggc cgaatgtaca acgagtttct
    10801 cggcaaggtt cacttcttcc tgatgttcat cggcgtgaac atggtcttct tcccgatgca
    10861 tttcctcggg ctggacggaa tgccgcgaag gatcccggac tacacgcccg ccttctccga
    10921 gtggaactac gtcgccaccg tgggcttcat ggtcaccgca gccggcatgg cggttttctt
    10981 cgtcaacgtc ttctactcgc tcttcgccgg gcccaaggcg ccgggcaact attggggcga
    11041 aggcgcgacg acgctggaat ggacgctgtc cagcccgccg ccgttccacc agttctcgac
    11101 gctgccgaag atcgactagt cgacactatc cacgaaaaga cggcccgtcc tgcactcgcg
    11161 gggcgggctt tctttgactt ccgctgcacg ggcacccaca ttgatcctgc aatgacgaat
    11221 gcaggattca gccgcttcat cgtccactca ggacagatcc ccgcgcgagc ctagccccgg
    11281 gtggcggcac gcgctgtccg gggagcattt ttcacgtaac ttcgagatga gtgagacacg
    11341 ccatggcgaa tgccatcgcg ggcaacggac gcccgcaaat ccatcttctt gcttccgaat
    11401 ccgacctggt tgccgacctg gccctccaga ccgagcaccg ccagccgctg atcgctgcga
    11461 tgctgctcgg cgagatcgag cgcgccgagc tgcacgatct cgacaccctt cccgacgatg
    11521 cgatcaggct cggttccgat gtgagcttcg tcgatgaaaa gacgggccag cttcgcaagg
    11581 tgcagctcgt cctgccggcc gaagcgaata tcgccgaaga ccggatatcg atcctcaccc
    11641 cgatgggcgc ggcgctctac gggctgacaa ccggcgacac catcgattgg cccgacctgg
    11701 acggcaatca tcgccgaatc cggatcgccc gcgtcgccca ggaccaatcg ggtgaccggc
    11761 aaaaggcgat gaactaagcg ccggagccta ttgcgcggcg ggtccttcgc ccccgtggct
    11821 aggcggggcc gccgccgccg tgcgataagt ccccgggacc cttgtctcag gggagtcatc
    11881 gcatggtttc agcgatcata tccgcattgc tgcaagtcgg cttcgtgctc atcgtcgcag
    11941 gtgcggttta tttcgcaatg cgccgagggc agcgctcctt tgcaaggttc gtcggattct
    12001 atccggcgcc cttgaaggcg atcgccgctg gcctcgcttt ggggttggcc gcgacggcgc
    12061 tcatcctgat cgtccccggg atagcggatc tggcctccga acgcgggacg gtcgcgggcg
    12121 acgcggcaaa gtccggagtg tcggcttcgg tggtcatcgc cctcgtcatc gcagctgttt
    12181 tcaagacggc actgtccgag gagctgctgt ttcgcggatt gatcgggaag cgcctgatcg
    12241 cggcggcggg atttcagcta ggcaatttag tccaggccgt cctgttcggc ctcgcccatt
    12301 tgctcctgct gctggtgccg gcggcgtcgg tcggcctggt ggcggtgatg gttctcttca
    12361 ccggcaccct cggctggatc aacggctggc tgaacgagcg cctgggcgac ggatcgatcc
    12421 tgccgggttg ggcggggcat gccgttgcaa acctctgcgc ctatcttggg cttgcgctga
    12481 tgatgtcgca gggcagctga ggtcagccgg gaacccgctc cattttcacg atcttcaccg
    12541 cggggtccag catctggcct ttcatgggcc cttcgccgcg ggtcggcgat acgggcgagg
    12601 cgaggatggc tttcacgacg tccatcccgt cgatcacgtg gccgaatgcg gcgaacccgc
    12661 tgggcccgtc gaaggccggg atatccgtcg tcatgatgaa gaagtccgcc tgggccttgc
    12721 cgggcgcgag cgccgccatc gcgatcgaac cggccgtgtt gcgaattccg gtccggtcgc
    12781 tggattcgaa ggccaccgga ggattgagct tgcgggcatc gcttgtgatg ccgccctgga
    12841 tcagcccgcc ggcaccatag ggcatcgccc ggtaaaaggt ctcgccgtcg aatttcccgg
    12901 cgtccacata agccaggaag ttggctgccg tcagcggcgc tcgctccgtc tccagcgcca
    12961 ccacgatgcg accggcgctg gtttcgatcg acaccggcac caggttcggg tccgccgact
    13021 gggcctcggc aagagcggga gcggacagcg cggcgagcag cattgcgaat cgagtcagca
    13081 ttgcttttcc atagcaagcc ttttcctctt ggggccaacc gcttataggc ccggccgtgc
    13141 ccaccatgca gatgactgga ccaaccgcgc tgccggccga ttggcgcgat ctttacgcgc
    13201 tcaccaagcc gggcgtgatg aagctcgttg tcttcaccgg actgtgcggc ctgctcgccg
    13261 cgccggtgat gccgccggcc gtcatcggct ttaccgcgat cctgtgcatc gcgctcggcg
    13321 cgggggcagc gggcgcgctc aaccagtggt acgaagccga cctcgatgca aagatgaagc
    13381 gcactgccaa gcggccgctt cccgccggac ggctcgaccg ccagacggcg ctccatttcg
    13441 gtgtcggcct gggcgtcttt tcggtcatcc tcatggatct tgccgccaat cacctcgcgg
    13501 cgttcctgct tgccgcgtcg atcctgtttt acgtgctcgt ctacaccgtc tggctgaagc
    13561 gccggacggc gcagaacatc gtcatcggag gcgccgccgg ggctttcccg ccgctgatcg
    13621 gctgggtcgc tgcgactggc cgcatcgagc tcttgccggt gctgctgttc gcaatcatct
    13681 tcctgtggac cccgccgcac ttctgggcgc tgagcctgtt cgtgcgctcc gattatgccg
    13741 ccgcgaaggt tccgatgatg ccggttgtcg ccgggatcga agcgacgcgc cggcagatcg
    13801 cgatctacag cttcgtcatg gcggtggccg cggttgcgcc ctggcccctg ggattgactg
    13861 gctggatcta cggaacggct ggggcagcgc tcggagcgat attcgtcgca ttcggactct
    13921 cggtcgccgc gaacaaggcg accgagcccg cgggcatgcg cccggaaaag cggttgttcg
    13981 ccttttcgat catctatctg ttcgcgctct tctccgcgct ggtggctgac aggtggctgc
    14041 tggcatgacg gacgatccga aggcggagga cgagatcatc cgcgcgcgcc agcgcgagcg
    14101 ggcgcggatc atggcctggc tgctcggtgc cttcgtcgtg ctgttgttcc tcatcaccct
    14161 cgccaagatc ggcatgggga aatgaccagc accgtcaatc gcaacaaccg caccgcggcc
    14221 ctcatggccc tgatggggct ggcgatgctt ggcctcgcct tcgcttcggt gcccctctat
    14281 cggctgttct gccaggtcac cggcttcggc gggacgactc agcgggccga ggcggctccc
    14341 gcggtcgtcg gcaccggctc catgggggtc cgcttcgacg ccaacatcaa ctcggcgctg
    14401 ccgtggaagt tcgagccggt ccaggaggtc gtgcgggtga ggccgggagc cccgaccaag
    14461 atcctctacc gcgccaccaa cctggtcgcg cgcccgacga cggggcgggc ggtgtttaac
    14521 gtctcgccac tggccgccgg gcagtatttc tccaagatcg aatgcttctg cttcaccgag
    14581 cagaccctga ccggcgggca gagcgtcgat atgccggtgg tgttcttcgt cgatcccaaa
    14641 ttgcgcgacg accccgacct gaaaggcgtc gacgagatca ctctcagcta cacattttat
    14701 ccagtggaaa gtgacgccgc gggcggctag agccgcgcca cgaagttacg agggcaaagt
    14761 tacaagggac gagtaatggc ggcgacgcag aaccacgatt accacctggt caatcccgat
    14821 ccctggccga tcatcggcgc cttttcgtcg ctggcgctgt tcggcggcgc ggtgatgtgg
    14881 ttccacgaaa acccttatgg cgtgccggtg atggtcgccg gcttcgtcat ggtcctggtg
    14941 acgatggcga actggtgggc gaacacgatc cgcgaggcgc acgagggcta tcacacgccc
    15001 gtcgtcagcc tccacctgcg ctacggcatg atcctgttca tcgcctcgga agtgatgttc
    15061 ttcctcgcct ggttctgggc tttctacagc tcggcgctgt tcccgtccgc ggtcgaggca
    15121 gtcggcgccc aatggcctcc caagggaatc gaggtactcg acccgttcgg ctacccgctc
    15181 ctcaacacgc taatcctgct gtgctcggga acgacggtca cctgggcgca ccattcgctg
    15241 atccacggcg accgccacgg gcttaagctc gggctgcttc tgacgatcct gctcggcctg
    15301 ctgttcacca gcatccaggc ctatgaatac atccacgccc cgttcgactt caaaggcaat
    15361 atctacggcg ccaccttctt catggcgacc ggctttcacg gcttccatgt gatcgtcggg
    15421 acgatcttcc tgatcgtctg ctggcttcga gcgatcaagg gcgagttcac cccgaagcag
    15481 catttcgggt tcgaggcggc agcctggtat tggcacttcg tcgacgtggt gtggctgttc
    15541 ctcttcgtct ccatctacgt ctggggcggc tggggcgcgc cgacccacgg ctagcgaccc
    15601 ggcggtgcgc caggtttcgc ctgttgccgg ggcgctggcg gggctttgcc cccgctgcaa
    15661 atcgaagacg ctgtttgccg gctgggcgag attttacgac aagtgccgtg cctgcggcct
    15721 cgacttttca agcttcaacg ttggtgacgg tcccgccgcc ttcctgatcc tgatcatcgg
    15781 cgcgattctg gtcgtcgccg cgcttgtcgt cgatggccgc tacgcgccgc cctggtgggt
    15841 ccattcgatc tggatcccga tcggcttcgg cctgacggtc ttcggccttc gctgggcaaa
    15901 ggcgctgctc ctgacccagg aatatctgca cagggcgcgc gaagggcgca tcgccgacga
    15961 atgaagcggg tgccgatcgt cgcgaccgtc ctggtcgccg ccgccgttgc ggcgatgatc
    16021 gcgctcggcg tgtggcagct tggccgcgcg caatggaagg acgagctgat cgcccggtac
    16081 cagggggcgc aagagatgcc gccgatcgct tttccgacgg ccccgtcgac aggcgagccg
    16141 ccgctgttcc gctgggccac cgccttctgc ctgaagccgg tcggccaccg cgcaatcgcg
    16201 ggcgagaaca ggcacggcga gtccggctat gcccatatcg tccagtgcgc gaccgggacc
    16261 gaggggccgg gaatggcggt ggaggtcggc tggtcgaagg atccgagggc gaagttccag
    16321 tggccgggcg gccccgtgac cggcatgatc gcgcccgacc gcgagcaacg gatgcggctt
    16381 gtcgcggcat cggcgccgcc gggacttcac ccgagcgcgc tgccgacggt ccggtcgatc
    16441 cccaacaacc atttgttcta cgcgatccag tggttcctgt tcgccgggat cgcggtgctc
    16501 atctacgtcc tcgcgcttcg caagcgcgcg aagccggagt gagcggcgaa ctcaccacgc
    16561 tggtcgccga gccctgggac gactggggcc tgatcgactg cggcgacggg cgcaagctcg
    16621 agcgctacgg ctcgaccatc gtggcccggc cggagccgca ggcgatgtgg gcgccggcgc
    16681 ttggcgagtg ggacccggat gcaacgttcg tgcccgggtc cgacgaggaa ggcggcggcc
    16741 gctgggtcga gcatcggcgg gttccgaagc agtgggagct gtcgcgcgga gcagtgaggt
    16801 tcaacgcatc gctgactccc ttccgacacc ttggcttctt ccccgacatg gcgccgcagt
    16861 gggactggat gacggagcgc tcggccggcg ccgacgtgct caacctgttc ggctatactg
    16921 gggtagggac actgctcctg agcggagcag gggcgcggat ggtccatgtc gatgcatcga
    16981 agaagtcggt ggagcaggga aaggacaatg cccggctcac cggcttcgcc gaccggccga
    17041 tccgctggct ggtcgacgat gcggccaagt tcaccgcccg cgaagtccgg cgcggccgcc
    17101 gctacgacgg aatcctcctc gacccgccca agttcggccg cgggccgacc ggcgaagtct
    17161 ggcggctgga ggaaaatctc gcgccgttgc tcgccgactg ccgcaagctg ctcgacggtg
    17221 acagcggctt cctggtgcta acggttta
//
LOCUS       DATAKH010000148        13007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_25630,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000148 DATAKH010000000
VERSION     DATAKH010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 13007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13007
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25630"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2211)
                     /locus_tag="VHN55_06145"
     CDS             complement(<1..2211)
                     /locus_tag="VHN55_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HEX2803548.1"
                     /translation="MSMRMLIDARHPEETRVAVVKGNRIEEFDFESAEHKQLKGNIYL
                     AKVTRVEPSLQAAFIDYGGNRHGFLAFSEIHPDYYQIPKADRDALLREEAEHAAEEER
                     LRAAEGNGDEIDSAEEASDDEDAAPEDEADEAGTGSARSPVDESAADELRKKRQNLRR
                     RYKIQDVVQRRQVLLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTSHGGGISRKIS
                     NGPDRKRLKSIMGDLNLPRTMGLIVRTAGLQRTKTEIKRDFDYLARLWDEIREKTLKS
                     TAPALVYRDSDLIKRAIRDLYNRDIDEVIVEGEEGYKAARGFMKLLMPSHVRRVKQHT
                     ESTPLFQRHGAEDQLSAMYQPMVQLKSGGYLVINPTEALVSIDINSGRSTREHNIEQT
                     AFNTNLEAAQEIARQLRLRDMAGLIVIDFIDMEQSSHVRKVEKAMKEALKNDRARIQV
                     GRISSFGLMEMSRQRLRTGVLEASTKPCPHCEGTGLMRTAASAGLSALRIVEDEAARG
                     RGEKLLLRAGRDAAVYVLNKKRSELAEIESRYGVSIEIAIDESFEGAKMTIEASGAKP
                     VPAQPLPPVVESAEEDEEELEAALVGAEGDEHEDEDEEEGDQDRGGRPAEAQERGGRR
                     RRRRRGGRGRRRGGGQEGHVPADEIPPRVEVDEAAEPPAQPEDRAQGEESTAEDAKPK
                     RSRRRRKPAEARAEGAKAAEAPEVEPDSSPMVERPTDEEPPIADTQAVAEPEPKP"
     gene            2620..3492
                     /locus_tag="VHN55_06150"
     CDS             2620..3492
                     /locus_tag="VHN55_06150"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX2803549.1"
                     /translation="MPGGWTIKQLVGGAGAFAAGGAILLALGGAAAAGVGSSQPGDAH
                     SVTVTLPSPASEVPIVEGRSPGRPLVLIDPGHGGRDPGAIAVSGEVTEKALALQFARE
                     LRDRLAANGRVRIAMTREDDRYLTLEQRSALARRLGASAYISLHMDSAPNPLARGASV
                     YSLSDVASDAEAERLAQSENNAVARAGGSDGSVRAILSDLVVRSQMNASANLAERLVR
                     NSRKGVELRPQPHRFADLHVLRSAGVPAILFEAGYISNVEDEALLRDPRQRSRIVQAL
                     AATIEADIAARSVR"
     gene            3580..6144
                     /locus_tag="VHN55_06155"
     CDS             3580..6144
                     /locus_tag="VHN55_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017181452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX2803550.1"
                     /translation="MPDLVRFNERVRERLAPLFRRRWIKILAIAGAMMFAAFAGVWLY
                     FATGLPTADALLAYQPPLPSKVRGYNGDPVQTFARERRVNLAYDEFPPVVINAFVSAE
                     DKTFFSHGGIDYPGLLGAVGDFAAKTITGGGRARGGSTITQQVAKGLLQDSSYNIGRK
                     IREAILAFRLESVLSKEEILELYLNQIFLGRNAYGVQAAARAYFDKDVDDLTLPEAAY
                     LAVLPKAPANYDPERATERALARRNYVLREMYQNDKITEAQWHSAASMPLGTIRYGAG
                     EHFRDMGGYFIEEVRRELLKRFGETAEDGPNSVYAGGLWVRSSVDPVMQEAAANALRE
                     GLASFDGGRGWRDLEKSIDVSGDWAGLLDRTPIGTGFPDWRKAVILSKDSSSAEIGFA
                     NGSTATLPASAASQPKRGGGGSAFSNFRPGMIIVVKDLGDGNYALRSIPEVSGGMLAQ
                     EVHTGRILAMQGGFDVVGSSYNRATQAMRQPGSAFKPLVYETALENGMTPASIVVDAP
                     FCVWQGAGLGNKCFTNFDHRYAGAKTMRWGVEQSRNLMTVRTASKVGISKVADTARKL
                     GVGDYPNYLSIALGAGDTTVARLVNAYAILANHGRSVTPTTIDYVQDRDGKVIFRSDN
                     RCAIMQGCNAADWDGKPMPRPPVRTKQLLDPMAAFQMVHIMEGVIERGTATVLRDLDR
                     PLFGKTGTTSGPTNVWFAGGTPDIVAAVYLGYDQPRPLGGWAQGGRVAAPIFKEWAKT
                     ALKDRPKLPFVAPAGIRWVRIDRASGRKVFGTFPTAVDPKSAVIWEAFQPQTEPRRSF
                     RNRHGRQDQAEDQEQPRERLPARRAVASQPQYQAPAPVTQYQAPQPAPLQNPTAAQ"
     gene            6182..7309
                     /gene="prfB"
                     /locus_tag="VHN55_06160"
     CDS             6182..7309
                     /gene="prfB"
                     /locus_tag="VHN55_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEX2803551.1"
                     /translation="MRAEAQANVDQINAATALLRRFLDWDRAQKRLEELNAKVEDPQL
                     WDDPKAAQEVMRERRRLDEAIGATQAIERELADVVELMELAESEGDSALVDDAVKSLA
                     DLAERAERDKVAALLAGEADANNAYVEVNAGAGGTESQDWAEMLLRMYTRWGERHGCK
                     VEMIDHHSGEQAGIKSATILVKGENAYGNLKTESGVHRLVRISPYDSNARRHTSFSSV
                     WVYPEVDEDIEIEVNESDLRVDTYRASGAGGQHVNTTDSAVRITHVPTGIVVACQNER
                     SQHKNRASAMKQLKARLYEAELQKREAEADAANATKSDIGWGHQIRSYVLQPYQLVKD
                     LRTGVTSTSPGDVLDGDLDRFMAAALSQRVTGEKIEVEDVE"
     gene            7299..7997
                     /locus_tag="VHN55_06165"
     CDS             7299..7997
                     /locus_tag="VHN55_06165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010218327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2803552.1"
                     /translation="MSNRRRAAPALLALLLVASCRSQPEEDRFPKPNRPVAAIVGNSF
                     STENARDRMGEATKVIELAGVKPGMWVADVGAGTGYYAVRLSPVVGSHGRVLAEDILP
                     EVRDRLAERVQRENLQNVAVTLGEPDDPKLPPRSLDRVFLVHVYHEVESPYAFLWNLR
                     EALKPGALLIVVDADRPPQRHGMPPALLRCEFAAVGLKLRQFQSMENGDAYFASFEPV
                     GERPKPSEIKPCKA"
     gene            complement(7994..9829)
                     /gene="typA"
                     /locus_tag="VHN55_06170"
     CDS             complement(7994..9829)
                     /gene="typA"
                     /locus_tag="VHN55_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003050854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEX2803553.1"
                     /translation="MNLRNVAIIAHVDHGKTTLVDQLFRQSGTFRDNQRVEERAMDSN
                     DLEKERGITILAKCTSVEWDHDGETTHINIVDTPGHADFGAEVERILSMVDGVILLVD
                     AAEGPMPQTKFVTGKALSLGLRPIVVVNKIDRPDARPAEVLDEVFELFINLDASDEQL
                     DFPTLYASGRAGYAGLTDDVRSGDLTPLFETIVSHVPAPGLDPEAEFKMLATLLDRDP
                     FLGRILTGRIESGRLNVNMPIKAIDVDGKVVEEGRATKVFAFRGLERVPVEAAQAGDI
                     VAIAGLVNATVSNTIADPAVAEPVAKARPIDPPTLAMSFSVNDSPYAGRDGDKVQSRV
                     IRDRLEREAEGNVAIRVTTAADNDSFEVAGRGELQLGVLIETLRREGFELSISRPRVL
                     FRNGPNGREEPYETVVIDVDDEFTGTVIDKMALRKAEMTDMRPSGGGKTRLTFSAPSR
                     GLIGYHGEFLSDTRGTGIMNRLFEKYGPYKGPIQGRQNGVLISMEQGEAVAYALNALE
                     ERGVLFISPGDKLYEGMVIGENAKPQDLEVNPLKSKQLTNFRASGPKDESIRLTPPRR
                     MSLEQAIAYIQDDELVEVTPKHIRIRKRHLDPHERKRAARRAEAA"
     gene            complement(9911..10330)
                     /locus_tag="VHN55_06175"
     CDS             complement(9911..10330)
                     /locus_tag="VHN55_06175"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEX2803554.1"
                     /translation="MQQFTFSHTPSALAARFTTVAHKWVADGPAERAEAARRKLLTAI
                     ADNEPATLNEAAAAVERGAPAVSRSVEGLVRSGLVEREPDPHNRRRLALRLTQAGRDE
                     LARSPVSNRALRTKLERLAHSELRAVERAIEIMERGL"
     gene            10452..11633
                     /locus_tag="VHN55_06180"
     CDS             10452..11633
                     /locus_tag="VHN55_06180"
                     /inference="COORDINATES: protein motif:HMM:NF024742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2803555.1"
                     /translation="MSKRPALPRTVWVLGFVSLLMDLSSEIYHALLPVFITSVLGLPV
                     IALGAIDGIAEGTASFAKLVSGRLSDRSRKRKPWILLGYGLAALSKPLFPLANGAWPI
                     AAARFADRIGKGIRGAPRDAMIADETPPAIRGRAFGLRQALDTVGALLAPVLAVALMF
                     ALANDIRTVFWIAAIPAALSALLVLFAIRETAPARPKRDRQPLFRGFREISKQTQRLL
                     AVGFLFMLARFSESFLILRGLDLGLSPALSPLALVLFNLGFLALAYPAGALSDRIAPR
                     SILMAGIAVLIAGDLVLAGGFGFAGLTIGVLLWGAHMALTQGIFARMIADSAPEHLRA
                     TSFGAFYFVTGIATVLASIAGGWLWDRNGASATFLAGAAVAALALVALAIVPNEPRTS
                     E"
     gene            complement(11623..>13007)
                     /locus_tag="VHN55_06185"
     CDS             complement(11623..>13007)
                     /locus_tag="VHN55_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010216575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX2803556.1"
                     /translation="GFEAPEANVRAVRFATEKPYSEGVIEERKLFMELMSGTQAKAQQ
                     YFFFAERKAAKIDDIPEDTQPRDVRKVGVIGAGTMGGGISMNFLSAGIPVTIVEMGQE
                     ALERGTGVIRKNYEASAAKGRFTGEQVEKAMGLLSPTLDFEALADCDLIIEAVYENMD
                     VKKEVFGRLDKIAKPGAILASNTSYLNVNEIAASTSRPQDVLGMHFFSPANVMKLLEV
                     VRGEKTAPDVLLTAMRLGKKIRKVPVVAGVCHGFIGNRMLMPRQIEATKLLLEGATPE
                     QVDKVHVDFGMPMGPFQMADLAGVDIGWHRDPNRVENIRDALCAIERWGQKKGAGFYD
                     YDEKRKPSPSPVVQEIIEKFAAAKGVERREITDQEIVERTIYPMVNEGAKILEEGMAQ
                     RASDVDVVWVYGYGWPVYKGGPMYWADNIEGLTKIVAGLKRQEERIKPDFTFSKLLLE
                     KAESGEKFTR"
BASE COUNT         2043 a         4358 c         4187 g         2419 t
ORIGIN      
        1 gggcttcggc tcgggctcgg caacggcctg ggtgtcggcg atcggcggtt cctcgtcggt
       61 cgggcgttca accatcggcg agctgtcggg ctcgacttcg ggagcttcgg cggccttggc
      121 gccctcggct ctggcctcgg caggcttgcg tcgacgtcgg cttctcttcg gcttggcgtc
      181 ctcggccgta ctttcttcgc cctgtgctcg atcctcgggt tgcgcaggcg gctcggccgc
      241 ttcgtcaact tccacccgag gcggaatctc gtcggcggga acatgtcctt cctggcctcc
      301 gccacggcgg cgtccgcgcc cgccgcgtct gcggcgacgg cgcctgccgc ctcgctcctg
      361 cgcctcggcc ggccggcctc cgcgatcctg atcgccctct tcctcgtcct cgtcctcgtg
      421 ctcgtcgcct tccgctccga ccagcgccgc ctcgagttct tcctcgtctt cctccgcact
      481 ctcgacaacc ggaggcaggg gctgcgccgg aaccggcttt gcccccgaag cctcgatcgt
      541 catcttggcg ccctcgaagc tctcgtcgat cgcgatctcg atcgacaccc cgtagcggct
      601 ttcgatttcg gcgagctcgg agcgcttctt gttgagcacg taaaccgctg cgtcgcggcc
      661 ggcgcgaagg agtagcttct cgccgcgtcc gcgagccgct tcgtcctcca cgatccgaag
      721 cgccgacagg ccggccgagg cggctgtccg catcagcccg gtgccctcgc aatgcgggca
      781 cggcttggtc gaggcctcga gcacgcccgt gcgcagccgc tggcggctca tttccatcag
      841 cccgaagctc gaaattcgcc cgacctggat tcgcgcgcgg tcgttcttca aagcctcctt
      901 catcgccttc tcgacttttc gaacatggct ggactgctcc atgtcgatga agtcgatgac
      961 gatcagcccc gccatgtcgc ggagcctgag ctggcgggcg atctcctgcg ccgcctcgag
     1021 attggtgttg aacgcggtct gctcgatatt gtgctcgcgg gtcgaccggc ccgagttgat
     1081 atcgatcgaa accagggctt cggtcgggtt gatcaccagg tacccaccgg atttaagctg
     1141 taccatcggc tggtacatgg ccgacagctg gtcctcggcg ccgtgccgct ggaacagcgg
     1201 ggtggactcg gtgtgctgct tcacccggcg cacgtggctc ggcatcagca gcttcatgaa
     1261 gccgcgggcc gccttgtagc cttcctcgcc ctcgacgatc acttcgtcga tatcgcggtt
     1321 gtaaaggtcg cggatcgcgc gcttgatgag gtcgctgtcg cgatagacca atgccggggc
     1381 ggtgctcttg agcgtctttt cgcggatctc gtcccacagc cgggcgagat agtcgaagtc
     1441 gcgcttgatc tcggtcttgg tgcgctggag cccggcggtg cgaacgatca ggcccatcgt
     1501 ccgcggcagg ttgaggtcgc ccatgatcga cttcaagcgc ttccggtcgg gtccgttcga
     1561 gattttccgg cttatcccgc cgccgtgcga cgtgttgggc atcagcacgc aatagcggcc
     1621 ggcgaggctg agataggtgg tcagggccgc gcccttgttg ccgcgctcct ccttgaccac
     1681 ttggaccagc agcacctggc ggcgctggac cacatcctgg attttgtagc ggcggcgaag
     1741 gttttggcgc ttcttcctca gctcgtcggc ggcggattcg tcgaccggcg agcgggcgga
     1801 gccggttccg gcctcgtccg cttcgtcttc gggcgcggcg tcctcatcgt cagaggcctc
     1861 ctcggcgctg tcgatctcgt cgccattgcc ctcggcggcg cggagccgct cctcctcggc
     1921 cgcatgctcc gcttcctccc tgaggagggc atcgcggtcg gctttcggga tttggtaata
     1981 atcggggtgg atttcggaaa aagcgaggaa accgtgccgg ttgccgccat agtcgatgaa
     2041 cgccgcctgc agcgacggct cgaccctggt gaccttggct agatagatat tccccttgag
     2101 ctgcttgtgc tcggcggatt cgaagtcaaa ctcctcgatc cggtttccct tgacgacggc
     2161 gacccgggtc tcctccgggt ggcgcgcatc gatcagcatg cgcattgaca ttgaaagctc
     2221 tccgggcgcg gccgctcggc cgcttgggct gcgggcgcgc ctttgactgg gctggctcaa
     2281 gcgggtgtcg gccgctggag ctggcggatg tgatgaaaat cgcgtctgct gcgcgcgcca
     2341 ttgccgcttc gctagcggaa atgccgccct gctgctcgaa acgagagccg gcagggggga
     2401 atgatggcat catgcagcgt caacctgttg aatgccgcgt cccggatcgg gagcggcgcg
     2461 acccagcgac tttgcaagag ccgagggttg atgccggtta gcatcgggcg aacctgtccg
     2521 caacaaagtt acttcggtgc gggcatgttc atcgataagt ggctgttaac catgaattcg
     2581 tgatattagc acttaagcgc ggtatccgcc ggagatgcaa tgccaggggg ttggacgatc
     2641 aagcagctag tcgggggtgc gggcgcattt gccgccggcg gcgcgatcct gctcgccctc
     2701 ggcggggccg cggctgccgg ggtcggctcg tcgcaacctg gcgatgcgca cagcgtcacc
     2761 gtcaccctgc cttccccggc aagtgaagtc ccgatcgtcg aaggccgctc accgggacgg
     2821 ccgctggtgc tgatcgatcc cggccatggc ggccgcgatc ccggggcgat cgcggtctcc
     2881 ggcgaggtga ccgagaaagc gctggcgctc cagttcgctc gcgagcttcg cgaccggctc
     2941 gcagccaatg gccgggtccg gatcgccatg acccgcgagg acgaccgcta cctgactctg
     3001 gagcagcgat ccgcgcttgc ccgccgtctc ggcgcaagcg cttatatttc gctgcacatg
     3061 gacagcgcgc ccaacccgct agcgcgcggg gccagcgttt attcgctgtc cgatgtcgcc
     3121 tcggatgccg aggcggagcg gctggcgcag tcggagaaca acgccgtcgc ccgcgccggc
     3181 ggctccgacg ggtcggttcg cgccatcctt tccgacctcg tcgtgcgaag ccagatgaat
     3241 gcctcggcga accttgccga gcgactggtc cgcaattcgc gcaagggcgt cgagcttcgg
     3301 ccccagccgc accgttttgc cgaccttcac gtccttcgca gcgccggagt gccggcgatc
     3361 ctgttcgagg ccggctatat cagcaatgtc gaggacgaag cgcttcttcg cgacccccgg
     3421 cagcggtcac gaatcgttca ggcgcttgcc gccacgatcg aagccgacat tgccgcccgt
     3481 tccgttcgct agcctttgat gctttccgag ataggcggaa gcggctagat cgagccggaa
     3541 accatgaact tcgaagcctt gtcgcccccc cgagtcccga tgcccgacct cgtccgcttc
     3601 aacgagcggg tgcgcgagcg gctggccccg ctgttccggc ggcgctggat caagatcttg
     3661 gccatcgccg gcgcaatgat gttcgccgcg tttgccgggg tctggctcta tttcgcaacc
     3721 ggccttccaa ccgccgatgc gctgctagcc taccagcccc cgcttccgag caaggttcgg
     3781 ggctataatg gcgaccccgt ccagaccttc gcccgcgagc ggcgagtaaa tctcgcctat
     3841 gacgaatttc cgccagtcgt gatcaacgcc ttcgtgtcgg ccgaggacaa gaccttcttc
     3901 tcgcatggcg gcatcgatta tccgggcctc cttggcgctg tgggcgattt cgcagccaag
     3961 accatcaccg gcggtggccg cgcccgcggc ggttcgacga tcacccagca ggtggccaag
     4021 ggactgcttc aggacagcag ctacaatatc ggtcgcaaga tccgcgaggc gatcctcgcc
     4081 ttccggctgg agtcggtgct gagcaaggag gagatcctcg aactctacct caaccagatt
     4141 ttcctcggcc gaaacgctta cggcgtacag gcggcggcgc gcgcctattt cgacaaggac
     4201 gtcgacgatt tgacgcttcc agaggcggcc tatcttgccg tgcttcccaa ggctcctgcc
     4261 aattacgatc ccgagcgggc caccgagcgg gccctagccc gccgcaatta tgtgctccgc
     4321 gagatgtacc agaatgacaa gatcaccgag gcgcaatggc actccgcggc ctcgatgccg
     4381 ctggggacga tccgctacgg ggccggcgag catttccgcg acatgggcgg ttatttcatc
     4441 gaagaagtcc gccgcgagct actcaagcgc ttcggcgaga ctgccgagga cggtcccaac
     4501 agcgtgtacg ccggcggcct gtgggtccgc tcgtcggtcg acccggtgat gcaggaagca
     4561 gcggccaacg cgcttcgcga aggtcttgcc agtttcgacg gcggccgcgg ctggcgagac
     4621 ctcgaaaaga gcatcgacgt gtcaggcgac tgggcgggtc ttctcgaccg cacccccatc
     4681 ggcaccggct ttcccgactg gcgcaaggcc gtgatcctgt cgaaagattc cagttccgcc
     4741 gagatcggct tcgccaacgg ctccaccgcg acccttcccg cttcggccgc ctcgcagcct
     4801 aagcgcggcg gcggcggctc ggcgttcagc aacttccggc cgggaatgat catcgtcgtc
     4861 aaggacctcg gcgacggcaa ttatgcgctt cggtcgatcc ctgaggtgtc gggcgggatg
     4921 cttgcgcagg aagtccacac cggcaggatc ctcgctatgc agggcggctt cgacgtggtc
     4981 ggctcgtcct acaaccgcgc gacccaggcg atgcggcagc cgggctccgc attcaagccg
     5041 ctggtctacg agaccgcgct cgagaacggc atgactccgg caagcatcgt cgtcgatgcg
     5101 cccttctgcg tctggcaggg agcggggctg gggaacaagt gcttcaccaa tttcgaccac
     5161 cgctacgcag gcgcgaagac catgcgctgg ggagtcgagc agtcgcgcaa cctgatgacg
     5221 gtccgcaccg cttcgaaggt cggaatctcc aaggtcgccg atacggcgcg caagctcgga
     5281 gtcggcgatt atccgaatta tctctcgatc gcgcttggcg caggcgacac caccgttgcc
     5341 cgcctcgtca acgcctatgc gatcctcgcc aaccacggcc gctcggtcac tccgacgacg
     5401 atcgactatg tccaggaccg cgacgggaag gtcatcttcc gctccgacaa ccgctgcgcg
     5461 atcatgcagg gttgcaacgc ggccgactgg gacgggaagc cgatgccgag gccgccggtg
     5521 aggacgaagc agctgctcga cccgatggcg gcgttccaga tggtgcacat catggaaggc
     5581 gtcatcgagc gcgggaccgc gacggtgctg cgcgatctcg accgtccgct gttcggcaag
     5641 accgggacca ccagcggccc gaccaacgtc tggttcgccg gcggaactcc cgacatcgtc
     5701 gccgcggtct atctcggcta cgaccagccg cggccgcttg gtggttgggc ccagggcggc
     5761 cgggtcgcgg ccccgatctt caaggaatgg gcgaagacag cgctgaagga ccggccgaag
     5821 cttcccttcg tcgctcccgc cgggatccgg tgggtccgga tcgaccgggc gagcgggcgg
     5881 aaggtattcg ggaccttccc gaccgccgtc gacccgaaat cggccgtcat ctgggaggca
     5941 ttccagcccc agacggaacc gaggcgaagc ttccgcaacc gccacggcag gcaggaccag
     6001 gcggaggatc aggaacagcc ccgcgagcgt ctcccggctc ggcgagcagt cgcgtcgcag
     6061 ccgcaatatc aggcgcccgc tccggtgacc caatatcagg cgccgcaacc ggcgcccttg
     6121 caaaacccca ccgccgctca gtagcggcgt acggcaactc cttacggaaa gaccgatcgc
     6181 catgcgcgcc gaagcgcaag ccaatgtcga ccagatcaac gccgcgacgg cgctccttcg
     6241 ccggttcctc gactgggacc gcgcgcaaaa gcgtctcgag gagctgaacg caaaggtcga
     6301 agacccgcaa ttgtgggacg atcccaaggc ggcccaggag gtgatgcgcg agcggcggcg
     6361 gctcgacgag gcaatcggtg cgacccaggc catcgagcgc gaactggccg atgtcgtcga
     6421 gcttatggag cttgccgaaa gcgagggcga ctcggcgctg gtcgacgatg cggtcaaaag
     6481 ccttgccgac ctcgccgagc gtgccgagcg cgacaaggtc gccgcgcttc ttgccggcga
     6541 ggccgacgcc aacaacgcct atgtcgaggt caatgcgggg gccggcggca ccgaaagcca
     6601 ggactgggcg gaaatgctgc ttcgaatgta cacccgctgg ggcgagcggc acggatgcaa
     6661 ggtcgagatg atcgatcacc attccggcga gcaggcgggg atcaagtcgg cgacgatcct
     6721 ggtcaagggc gagaacgcct acggcaacct caagaccgaa agcggcgtcc accggctggt
     6781 ccggatcagc ccctacgatt ccaacgcccg ccgccacacc agcttctcga gcgtgtgggt
     6841 ataccccgag gtcgacgagg acatcgagat cgaggtcaac gaatcggacc tccgggtcga
     6901 cacctaccgg gcttcagggg ccggcgggca gcacgtcaac accaccgaca gcgcagtgcg
     6961 cataacccac gtcccgaccg gcatcgtcgt cgcctgccag aacgagcgct cgcagcacaa
     7021 gaaccgcgcc tcggccatga aacagttgaa ggcccgactt tacgaagccg agttgcagaa
     7081 gcgcgaggcg gaggccgacg ccgccaatgc cacaaagagc gacattggct ggggccacca
     7141 gatccggagc tacgtgcttc agccgtacca gcttgtgaag gaccttcgca ccggggtcac
     7201 ttcgacgagc cccggcgacg tgctcgacgg cgacctcgac cgcttcatgg cggccgcgct
     7261 ctcgcaacgg gtaaccggcg agaagatcga ggtcgaggat gtcgaatagg cggcgcgctg
     7321 cgccggcgct cctggcgctg ctgctggtcg cttcgtgccg ctcgcaaccc gaagaggacc
     7381 gcttccccaa gccgaaccgg ccggtcgccg cgatcgtcgg caattccttc tccaccgaga
     7441 atgcccgcga ccggatgggc gaagcgacga aggtcatcga gctcgccggg gtgaagcctg
     7501 gaatgtgggt cgccgacgtc ggcgcgggca ccggctatta tgcggtccgc ctgtccccgg
     7561 tcgtaggctc ccacggccga gtgctcgccg aagacatcct ccccgaagtc cgcgaccgcc
     7621 tggccgagcg cgtgcagcgg gagaatttgc agaacgttgc cgtaacgctg ggcgagcctg
     7681 acgatccaaa gcttccgccg cgatcgttgg accgggtctt cctcgtccac gtctaccacg
     7741 aggtcgagtc gccctacgca ttcctgtgga acctccgcga ggcgctaaag cccggcgcgc
     7801 ttctcatcgt cgtcgacgcc gaccgaccgc cccagcgcca cggaatgccg cctgccctgc
     7861 tgcgctgtga gttcgcagcg gtcggactga agcttcgcca gttccaatcg atggaaaacg
     7921 gcgacgctta tttcgcctcg ttcgaaccgg tcggcgagcg cccgaaaccg agcgagatca
     7981 agccctgtaa ggcttaggct gcctccgccc ttcgcgccgc ccgcttgcgc tcgtgcgggt
     8041 cgaggtggcg cttcctgatc cggatgtgct tgggcgtcac ttcgaccagt tcgtcgtcct
     8101 ggatgtaggc gatcgcctgt tccaggctca tccgccgcgg cggggtcagg cggatgctct
     8161 cgtccttcgg gccggaggcg cggaagttgg tcagctgctt ggacttcaag gggttgacct
     8221 cgaggtcctg gggcttggcg ttctcgccga tgaccatgcc ttcgtagagc ttgtcgccgg
     8281 gcgagatgaa caggactcca cgctcctcga gagcgttgag cgcataggcc accgcctcgc
     8341 cctgctccat cgagatcagg actccgttct ggcggccctg gatggggccc ttgtacggcc
     8401 cgtacttctc gaacaatcgg ttcatgatgc cggtgccgcg ggtgtcggac aggaactcgc
     8461 cgtgatagcc gatcaggccg cgagaggggg ccgagaaggt cagccgggtc ttgcccccgc
     8521 ccgacgggcg catgtcggtc atctccgcct tgcggagcgc catcttgtcg atgacggtgc
     8581 cggtgaattc gtcgtcgacg tcgatgacga ccgtctcata cggctcctcg cgaccgttgg
     8641 ggccgttgcg gaacagcact cgcggacggc tgatcgacag ctcgaagccc tcgcggcgca
     8701 gcgtctcgat gagaacgccg agctggagct cgccgcggcc ggcgacttcg aagctgtcgt
     8761 tgtcggccgc cgtggtgacg cggatcgcga cattgccctc ggcctcgcgc tccagtcgat
     8821 cgcggatgac tcggctctgg accttgtcgc cgtcgcggcc ggcataaggg ctgtcgttga
     8881 ccgagaagct cattgccaga gtcggcgggt cgatcgggcg ggccttggcc accggctcgg
     8941 cgacggcggg gtcggcaatg gtgttggaga ccgtcgcatt gacgaggccg gcgatggcga
     9001 cgatgtcccc cgcctgcgcc gcttcaactg gcactctctc gagcccgcgg aaggcgaaca
     9061 ccttggttgc gcggccctcc tcgacgacct tgccgtcgac gtcgatcgcc ttgatcggca
     9121 tgttgacgtt gagccgtccg ctctcgatcc gcccggtcag gatccggccc aggaacgggt
     9181 cgcggtcgag caaggtggcg agcatcttga actcggcctc ggggtcaagc ccgggagcgg
     9241 gaacgtggct gacgatggtc tcgaacagcg gcgtcaggtc gcccgaacgg acgtcgtcgg
     9301 tgaggcccgc atagccggcc cggccggacg cgtagagcgt cgggaaatcg agctgctcgt
     9361 cgctggcgtc gaggttgatg aacaactcga acacctcgtc gaggacttcg gcggggcggg
     9421 cgtcgggacg gtcgatcttg ttgacgacga cgatcggccg aagccccagc gagagcgcct
     9481 ttccggtgac gaacttggtc tgcggcatcg gcccttcggc ggcgtcgacg agaaggatga
     9541 ccccgtcgac catactcagg attcgctcga cctcggcgcc gaagtcggcg tggccgggcg
     9601 tgtcgacgat gttgatgtgc gtcgtctctc cgtcatggtc ccattcgacc gacgtgcact
     9661 tggccaggat ggtgatcccg cgctctttct ccaggtcgtt cgaatccatc gcgcgctctt
     9721 ccacgcgctg gttgtcgcgg aaggtgcccg actggcggaa cagctggtcg acaagggtcg
     9781 tcttgccgtg atcgacgtgg gcgatgattg ccacgttacg caggttcatc atcttttcct
     9841 gaaaaattga gcggcgcccc tacaggaatc gcgccattgt tgcaacgcaa catgggaccg
     9901 aaagcccctt ttacaagccg cgttccatga tctcgatggc gcgctcaacg gctcgcagct
     9961 cgctgtgcgc cagccgctcg agcttggttc gaagggcgcg attggaaacg gggcttcggg
    10021 cgagctcgtc gcggccggcc tgggtcaggc gaagcgccag gcgccggcgg ttgtgcgggt
    10081 ccggctcgcg ctcgaccagc ccggacctga ccagtccctc caccgagcgg cttacagcgg
    10141 gcgccccgcg ctcgaccgcg gccgcggctt cattgagggt cgccggctcg ttgtcggcaa
    10201 tcgccgtcag cagcttgcgc cgggcagcct cggcgcgctc ggcgggtccg tcggcgaccc
    10261 acttgtgagc gacggtcgtg aaccgcgcgg caagcgccga gggggtgtgc gaaaaggtga
    10321 attgctgcac ggcaactgtt tcaacagcaa taaggttgta gctgtcaact gcaattgccg
    10381 tccgaagcgg agcgaagcta tctgacggta tgtgattgcg tcgtcgctcc gctgctcgca
    10441 atcaagcgct ggtgagcaag cgtcccgccc tcccccgcac cgtgtgggtg ctcggcttcg
    10501 tcagcctgct gatggatctg agcagcgaga tctaccatgc gctgcttccc gtgttcatca
    10561 cctcggtgct cgggctcccc gtcattgcgc ttggagccat tgacggaatt gccgagggca
    10621 ctgcgtcttt cgccaagctg gtctctggcc ggctgtctga ccgcagccgc aaacgcaagc
    10681 cgtggatcct tctcggctat ggtcttgccg ccttgtcgaa gccgctgttc ccgctcgcca
    10741 acggcgcctg gccgattgcg gcggcgcgat tcgccgaccg gatcggcaaa ggtatccggg
    10801 gtgccccgcg cgacgcgatg atcgctgacg aaactccgcc cgcaattcgc ggccgcgcct
    10861 tcgggcttcg ccaggcgctc gacacggtgg gcgcactgct cgcgcccgtt ctcgccgtgg
    10921 cgctgatgtt cgcgcttgcg aacgacatcc gcaccgtttt ctggatcgcg gccattcccg
    10981 ccgcgctgtc ggcactgctg gtgctgttcg cgatccgcga aacggcgccg gcaagaccga
    11041 agcgcgaccg acagcccttg ttccgcggtt ttcgggagat cagcaagcag acccagcggc
    11101 tgctggccgt cggattcctc ttcatgctcg cccgtttctc ggagagcttc cttatcctcc
    11161 gcggcctgga cctggggctt tcgcccgcgc tttcgccgct cgcgctcgtg ctgttcaacc
    11221 tcggcttcct ggcgctcgcc tatccagccg gagcgctgag cgaccggatc gctccccggt
    11281 ccatcctcat ggccggaatc gcagtactga tcgccggcga cctcgtcctg gccggcggct
    11341 tcggcttcgc gggcctgacg atcggcgttc tcctgtgggg ggcgcacatg gcgctgaccc
    11401 aagggatttt cgctcgaatg atcgccgaca gcgcgcctga gcaccttcgg gcgaccagct
    11461 tcggcgcctt ttacttcgtg acggggatcg cgaccgttct ggccagcatt gccggcggct
    11521 ggctctggga ccgcaatggc gccagcgcca ccttcctcgc cggagccgca gtcgctgcgc
    11581 tggccctggt tgcgctggct atcgtgccga acgagccgcg cactagcgag tgaacttctc
    11641 tccgctttcc gccttctcga gcaacagctt ggagaaggta aaatcgggct ttatcctttc
    11701 ctcctgccgt ttcaggccgg caacaatctt ggtcaggccc tcgatattgt cggcccagta
    11761 catcggcccg cccttgtaga ccggccagcc gtagccatag acccagacga catccacgtc
    11821 ggacgcgcgc tgcgccatgc cttcctcaag gatcttcgcg ccttcgttga ccatcggata
    11881 aatcgttcgc tcgacgattt cctggtcggt gatctcacgg cgttcgacgc ccttcgctgc
    11941 ggcgaatttt tcgatgatct cctgcaccac cggcgacggg ctgggcttcc gcttctcgtc
    12001 gtaatcgtag aagcccgcgc ccttcttctg tccccagcgc tcgatcgcgc agagcgcgtc
    12061 gcggatgttc tcgacccggt tggggtcgcg gtgccagccg atatcgacgc cggcgaggtc
    12121 ggccatctgg aacgggccca tcggcatccc gaagtcgacg tggaccttgt ccacctgctc
    12181 gggggtcgcg ccctccagca gcagcttcgt cgcctcgatt tgcctcggca tcagcatccg
    12241 gttgccgatg aagccgtggc agacgcccgc gaccaccggc actttcctga tcttcttgcc
    12301 cagccgcatt gcggtgagaa ggacgtcagg tgcggtcttt tcgccgcgga ccacttccag
    12361 cagcttcatc acattggctg gcgagaagaa gtgcattccc agcacgtcct gcggccgcga
    12421 cgtcgacgcc gcgatttcgt tgacgttgag atagctagtg ttggacgcaa ggatggcacc
    12481 gggtttggcg atcttgtcga gccgcccgaa cacttccttc ttcacgtcca tattctcgta
    12541 aaccgcctcg atgatcaggt cgcagtcggc gagcgcttcg aagtcgagcg tcggcgacag
    12601 cagccccatc gctttttcga cctgttcgcc ggtgaaccgg cccttggcgg cgcttgcttc
    12661 gtaattcttg cggatcacgc cggtgccgcg ctcgagtgcc tcttgtccca tttctacgat
    12721 cgtgacggga atcccggcgc tgagaaaatt catcgaaatt ccgccgccca tcgtgccggc
    12781 accgatcact ccgaccttgc ggacgtcgcg cggctgggtg tcctcgggga tgtcgtcgat
    12841 cttggcggcc ttgcgttcgg cgaagaagaa atattgctgc gctttcgcct gggtgccgct
    12901 catcagctcc atgaacagct tgcgctcttc gatgacgcct tcggaataag gcttctcggt
    12961 cgcgaacctg accgcgcgca cattggcttc cggagcctcg aacccgc
//
LOCUS       DATAKH010000149        15614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10762,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000149 DATAKH010000000
VERSION     DATAKH010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 15614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15614
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10762"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..810)
                     /locus_tag="VHN55_06190"
     CDS             complement(<1..810)
                     /locus_tag="VHN55_06190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEX2803557.1"
                     /translation="MATAAGAPPSRHGVIKELTIRGIVLGAILTLLFTAANVYLGLKL
                     GITFATSIPAAVISMAVLKFFRDSTIQENNIVQTIASAAGTLSAIIFVLPGLIMIGWW
                     TGFPYWLSVAIIATGGILGVMYSVPLRRALVTGSDLPFPEGVAAAEVLKVGAGVGGAE
                     ENRRGLIAIVTSSLVSTGYFILAKMKVAAETVSHAFPFGSGATAVSGNFSMALIGVGH
                     LVGMAVGVAMFVGLLISWLWIVPTWSADPVAIAAAAGDTEALVGNTFRQTAR"
     gene            complement(835..1227)
                     /locus_tag="VHN55_06195"
     CDS             complement(835..1227)
                     /locus_tag="VHN55_06195"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX2803558.1"
                     /translation="MADSCDLIESLEREWRDSLCASDMDRLRSLIHPQFTLIGTRSTG
                     PFTLSREEWLEAIEKRELIGIDLDVKEAVVFEDVIVGTVEAHWRVSYLGRAIEDCVLL
                     TDVWVRDDGRWQVVRRHSSPIPTVRSSR"
     gene            complement(1217..2827)
                     /locus_tag="VHN55_06200"
     CDS             complement(1217..2827)
                     /locus_tag="VHN55_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEX2803559.1"
                     /translation="MSDAAIFIGAGSGGGEPQRLELSRANRHGLIAGATGTGKTVTLQ
                     GIVEGFCAAGIPTFVADVKGDLSGLAMPGSPTGKTHEPFAARAREIGYGDWQYRGCPV
                     QFWDLFGEQGHPIRTTVTEMGPLLLSRLMDLNEVQEGVLTIAFHVADKQSMPIVDLDD
                     LQAMLVACGEAADELTLEYGNVSKASIGAIQRSLLQLRSQGGDNFFGEPALELDDFIA
                     VDEEGRGVVNILAADKLMSSPRLYSTFLLWLLSELFEQLPEVGDRPAPKLCFFFDEAH
                     LLFDDAPKALLDKIEQVVRLIRSKGVGVYFITQNPIDIPDTVAAQLGNRIQHKLNAFT
                     PRDQQAVKAAAETFRPNPNVDVESAITELKIGEALISLLQPDGAPAPVQRTLVKPPSS
                     RVGPLTAQERQVLVSTDGVGARYDVLVNRKSAHEMLAAKSAEAAAAAAAAKAKSEAER
                     AAAEQAKADAAAERERLKTLREQERLEAQRRRQEEQAAAREAREAARPTMYDKIVVSA
                     SRAAASSIGRQLGNRILRGILGGLTRGR"
     gene            complement(2900..4426)
                     /locus_tag="VHN55_06205"
     CDS             complement(2900..4426)
                     /locus_tag="VHN55_06205"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEX2803560.1"
                     /translation="MRSKESGKVRYAYGVATALLVGGTAFSLATGPVGAQTAQNAPAA
                     MAPRGAPSSFADLAERLQPAVVNISTRQKVAARRQVDPLEEILRQFGAPIPDQQQSPS
                     RETGSLGSGFIISPDGYIVTNNHLIQGANGTGTVDTVTVTLTNRKEYSARIVGRDQLA
                     DLALLKIDAKNLPYVQWGDSTHARVGDWVLAIGDPYGVGSTVTAGIISALHRGITGVG
                     AYDRYIQTDAAINMGNSGGPMFDLNGNVIGINTALISPTGTNVGIGLAIPAEAAKPVI
                     DALRRGQRPERGYLGVSLQPVEEDIATAMGIPKDVGEIVRTVQPGEPAAKAGIRQGDV
                     IVAINGKEVTPDQTVSYLVANLPVGSRVPVTIIRGGKRMNVAATITQRPTEEELSRQL
                     GQDDEGPADENPPASPRSEALGLSLQAITPQIAQALKLPPGTSGVVVTGVDESTDAGT
                     KLRRGDVILAVQGRKVTTPAQLMAAVEDARKAGRTSVLLLVKRGTGIEGFVGVEIPKG
                     "
     gene            complement(4495..5358)
                     /locus_tag="VHN55_06210"
     CDS             complement(4495..5358)
                     /locus_tag="VHN55_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017671670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEX2803561.1"
                     /translation="MTGFVKRHPLVTAGTALLLLLVAVMSFPIVPETRQGVIVRFGKP
                     VRILNAYDPRTPVGGAGAGLTWRIPFAEQIVWIDKRLLDVDMIRQPVLSTDQRRLEVD
                     AFARYRIVDPLRMYVTAGNEKRLNDAIRPILGSEVRNELGRVPFAALLSPERRGVMED
                     VRTALNRVAQQYGAEIVDVRIKKADLPDGTPLQSAFERMRTAREQEARSIRAEGQKRA
                     LIIRAEADAAAARTYAASFGKDPVFYDFYRAMQSYQTTFLGDGGEKPSPTTVILSPQN
                     DYLKEFSGGSR"
     gene            complement(5355..6449)
                     /gene="hflK"
                     /locus_tag="VHN55_06215"
     CDS             complement(5355..6449)
                     /gene="hflK"
                     /locus_tag="VHN55_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006950594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEX2803562.1"
                     /translation="MSMISGWGGRVRGLFSDTKGPWGPKGSGDGPEEPSRGPWGEPPK
                     RGKRANVEAGDNVSSLDDFLRKSRARFGGGPGGGGFPERFNASMMIWGVIGVILLWLV
                     FTSIHSIAPAERGVVTRFGRYVYTLGPGVSMTLPSPIERVEKIDINSIRSVDLGSPNT
                     EDLMLTGDQNVIDIAYSARWSIRDPESYLFELEDQEQAIRQVAESAMRAVISSVTLDD
                     AIGDRRSEIEARVAETMQRILDTYNAGVTIRGVAIREADPPQAVIDAFKDVSAAQQDA
                     QRFVNGATAYSQQLAQKAQGEATAFDKVYEQYRLAPDVTRRRMYYETMEKVLSNVDKT
                     IVEAPGVTPYLPLPEVKKRAQAQAQGGAAQ"
     gene            6472..7530
                     /locus_tag="VHN55_06220"
     CDS             6472..7530
                     /locus_tag="VHN55_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007681648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEX2803563.1"
                     /translation="MPKNSGKPALSAYLARRMENSANPLDALDALGDAKRIRSRRLSR
                     GVATIVADATGLDADERKRLEGNLQAAAAEIHGVEEVRVALTASEPRRKLIAIASGKG
                     GVGKSTLSANLAIAIARMGNKVGLIDADVYGPSQTKILGTDQRPTADDKRLNPVEAHG
                     IRFLSLGQLVSPGHALAWRGPMASGALSQLVEADWGDCEILVVDLPPGTGDVQLSLVQ
                     KSRPDGAVIVSTPQALSLIDATRAIDLFGKVSVPVIGLIENMSGYACPHCGEQSDPFG
                     SGGAEDAAREMGIPFLGRIPLDSSLREASDAGAPPAANSGTQSDAFAEIARKLMSALE
                     TAGAADHSPAEEITHASR"
     gene            7517..7957
                     /locus_tag="VHN55_06225"
     CDS             7517..7957
                     /locus_tag="VHN55_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019830991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX2803564.1"
                     /translation="MLRDDEEIAELLSSARTIAMVGASDKPERASYGVMKFLQKQGYR
                     VFPVNPKITGEHVHGEYVWRELSQIGEPIDIVDIFRNSEAAGEAVDQAIAVGAKAVWM
                     QLGVINREAADRAEAAGLKVVMNRCPKIEISRLGVPAVVDSPAA"
     gene            complement(7954..8991)
                     /locus_tag="VHN55_06230"
     CDS             complement(7954..8991)
                     /locus_tag="VHN55_06230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803565.1"
                     /translation="MRSYPLLALAFIASPALAHHPGPAGVGSGSGLTVHGTDTLAKGQ
                     GAAGLRFLFTRPDRRSDEELAGLAGMHVHAHDSDYDLNVSLGFAYGITDRLTVSAELP
                     YVRRDDLRAGEHSHSGGASHNSVEQLGTVAGFGDASILAKYRLTGNEGVRLALFGGVK
                     LPTGGTHRTSDDGERLETEHQPGTGSWDPMVGGSAAVTKGALQVTASALYQFSTKGAQ
                     RTRLGDRLQGGIAFCLRFGPGEDHHEAEEHHHDAGDEHHQHEVTEHGHQSWDAILEVA
                     GEWEGRQRISGVIENESGGAWVYAAPGVRFNSANGWSAAAAVAIPLWQNIRQSHPDNS
                     YRLIVSLGRSF"
     gene            complement(9056..10402)
                     /locus_tag="VHN55_06235"
     CDS             complement(9056..10402)
                     /locus_tag="VHN55_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HEX2803566.1"
                     /translation="MLSRDESSAAAERLVERACRAGAEAADALYASSHSMDVEVRLGE
                     LDHVGRSEGERIGLRVFVGARSASVASSDLSSEALDELVARALAMAAEAPEDPYAGLA
                     PTELLAGAPFPDLDSTDPLEPDPAELRIRALSTEAAALAVQGVANSSGASASASGSTI
                     ALATSAGFAGAYRATSYSCSASVIAGEGATMQRDSAWHSARHLSDLDSAEDIGRLAAE
                     RAVARLNSQRPKSGKMAVLFDPRVSHTLLGHLAGAISGSSVARKSSFLQDKLGTRIFA
                     QGVTVVDDPLRLRGLRSRPFDGEGLAVGRKDLIADGILKGWIADSASARQLGIKPTGH
                     ASRGVGSAPGVSPSNFYMESGTRSREELLSAFPSALLVTELIGHGANPVTGDYSRGAA
                     GFLVRDGEIGPAVQEITIASNLVEMFATLEPASDLQFRRGMDAPTLLIPEMTVAAA"
     gene            complement(10413..11324)
                     /gene="ubiA"
                     /locus_tag="VHN55_06240"
     CDS             complement(10413..11324)
                     /gene="ubiA"
                     /locus_tag="VHN55_06240"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEX2803567.1"
                     /translation="MSRTDIVPDSERRGFIGALPPPLRPYGSLMRLDRPIGTWLLYWP
                     CAWSLALAGVGSRWDLFLWFALGAFAMRSAGCVYNDIVDRDLDRRVERTRLRPLASGR
                     VPLAGAWVLIAILLWVALVVLLQLNRIAQVVSLTSVALVAAYPFMKRITWWPQAWLGL
                     VFSWGALVGWPAVTESLGWPALLLWFGSIAWVVGYDTLYAIQDKEDDALVGVKSSALR
                     LGDKAALGVGLFYAVAVMLWGAALWSVRPDWLALVALVPAALHLANQALRADPRDGEL
                     ALALFRANRTCGFLVFLAMLVVGVSSR"
     gene            11696..12436
                     /locus_tag="VHN55_06245"
     CDS             11696..12436
                     /locus_tag="VHN55_06245"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEX2803568.1"
                     /translation="MPATPAWPPKSLPRLFLRRPLAADATVVLDPDQANYLGNVLRLG
                     QGAELLVFDGESGEWLARITDTGKKRMTLLVERCTREAESVPDVWLAFAPVKRAQTDW
                     LVEKATELGAARLVPIITHRTIVERVKLERLQSIAIEAAEQCGRTRLPAITEPLPLAR
                     FLAERDGARTLYFADEAGGEAAATAFQPGAAVILTGPEGGFTDDERDAIRGQGNVVAI
                     SLGPRILRAETAALAALTIYMALAGDWR"
     gene            12449..13819
                     /locus_tag="VHN55_06250"
     CDS             12449..13819
                     /locus_tag="VHN55_06250"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019370398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEX2803569.1"
                     /translation="MTTRTDDSESPPIESRADLLATFSAGEKPRETWLIGTEHEKFVY
                     RCADHRAPSYEEPGGIRDLLMGLTEFGWRPVIEGGNVIALSGPDGTISLEPAGQFELS
                     GAAVENLHQTCTEADRHLKQCKAIGERLGVGFLGLGMWPDKARSELPVMPKGRYGIML
                     RYMPKVGKLGLDMMLRTCTIQTNLDYSSEADMVRKFRVGLALQPVATALFANSPITEG
                     KPNGYLSYRSHIWEDTDPDRTGMLPFVFEDGFGYERYCDYALDVPMYFVFRDGKYVDV
                     AGESFRDFLDGKLPQLPGEKPRISDFIDHLSTIFPEVRLKSFLEMRGADGGPWNRICA
                     LPALWVGLLYDNQALDAAWDLAKNWSNEEHEQLRREVPKVALNAPVPGGGTMHDLART
                     VLQIASDGLTRRARLNSAGDNEGGFLDPLNEIVASGKTPAERLLDLYHGRWQGDVSRV
                     YSEMSF"
     gene            13820..14791
                     /gene="pip"
                     /locus_tag="VHN55_06255"
     CDS             13820..14791
                     /gene="pip"
                     /locus_tag="VHN55_06255"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEX2803570.1"
                     /translation="MDIHSTQRRTLYPAIEPYKSGKLEVGDGHSLYWELCGNPDGKPV
                     VFLHGGPGAGISADHRRQFNPEKYKILLFDQRGCGKSTPHASLDANTTWDIVADIEKL
                     RTEIARVDKWMVFGGSWGSTLSLAYAETHPDRVTELVLRGIFLFDRYELDWMYREGGA
                     SQLYPDKWEEFVAPIPQEERGDLVEAFRKRLTGDDPEVRLQCAKAWSKWEADIVTLLP
                     DEHVVEEFTDSEKAIAIARIENHYMSNGGWLDEGQLLRDATKLKGIPAVICQGRHDCC
                     TPPAAAWALHKRWPEAELEIIPDSGHLFNEPGMIDALVRATDRFAGN"
     gene            14864..>15614
                     /locus_tag="VHN55_06260"
     CDS             14864..>15614
                     /locus_tag="VHN55_06260"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2803571.1"
                     /translation="MSAQNRRTYWEDTCSPDSFPALNGDLDVDVAIVGGGIVGIAAAR
                     MIKDAGMTAAVVEARRVGQGVSGKATAKVTSQHGLRYRTIEKKFGEDKARLYADAQET
                     GLRRIVELSRTYGFDADIETVPAYVYTREEGHVEEIEKEVELARRLGLPASVTRDTGL
                     PFDVKAAMRWDDQAQFHPIKFVAGLAQTITGDGSHVFENSRVTDWDPKREVTDRGTVK
                     GSATRLLYRGRRVGAFDPHPPLERSHPCSVRR"
BASE COUNT         2889 a         5072 c         5015 g         2638 t
ORIGIN      
        1 ccgcgcggtc tgccggaaag tgttgccgac cagcgcttcg gtgtcgccgg cagccgcggc
       61 gatcgcgacc ggatcggccg accaggtggg gacaatccac aaccagctga tcagaagccc
      121 gacgaacatt gccacgccga ccgccattcc gaccaggtgg ccgaccccga tcagcgccat
      181 cgagaagttg ccggagactg ccgtcgcccc acttccgaaa gggaacgcat ggctgaccgt
      241 ttccgcggcg accttcatct tggctaggat gaaatagccc gtcgagacga ggctgctggt
      301 gacgatggcg ataagtccgc gccgattttc ctctgccccg ccgacccccg caccgacctt
      361 gaggacctct gccgccgcaa ctccttcagg aaacggcagg tcggagccgg taacgagcgc
      421 gcgccgcaac gggaccgagt acatgactcc caggattccg ccggtggcga tgatcgcgac
      481 cgacaaccag tagggaaagc cggtccacca gccgatcatg atcaggccgg gaaggacgaa
      541 gatgatcgcc gagagagtcc ccgccgccga agcgatcgtc tggacaatat tgttttcctg
      601 gatcgtcgaa tcgcggaaga acttaagcac cgccatggag atgactgcgg ccgggatcga
      661 cgtcgcgaag gtgatcccga gcttgaggcc gagatagaca ttcgcggcag tgaacaacaa
      721 cgtcaggatc gcgccgagca cgatcccgcg gatggtcagc tccttgatca cgccatggcg
      781 ggacgggggc gctccggctg cagtcgccat aaatgccttt cgtgagttgc gggattagcg
      841 ggaacttcgc actgtcggga ttgggctcga atgacggcga acgacttgcc atcgaccgtc
      901 gtcgcggacc cagacatcag tcagcagcac gcagtcctcg atcgcgcggc cgaggtagga
      961 gacacgccag tgcgcctcga ccgttccaac gatcacatct tcgaagacaa cggcttcctt
     1021 tacgtcgagg tctattccga tcagctcgcg tttctcgatc gcttcgagcc actcttcgcg
     1081 ggacaaagtg aacgggccag tcgaccgcgt accgatcagg gtgaattgcg gatggatgag
     1141 cgagcgcagc cggtccatgt cgcttgcgca caaggagtcg cgccattcgc gctcgagcga
     1201 ttcgatgagg tcgcagctat cggccacggg tcaaacctcc aaggataccg cgcaggatcc
     1261 tgttaccgag ctggcgaccg atcgagctcg ctgccgcacg tgatgccgaa acgacgatct
     1321 tgtcgtacat ggtcggccga gcagcttcgc gcgcctcgcg ggcggctgcc tgttcctctt
     1381 gccgccgtcg ctgggcctcc agcctctcct gttcgcgaag ggtcttcagt cgctcgcgtt
     1441 cggcggcggc atcggcctta gcctgctccg cggcagcgcg ttcggcttcg gacttcgcct
     1501 ttgccgcggc agccgcggcg gctgcttcgg ctgacttggc ggcgagcatt tcgtgcgccg
     1561 acttgcgatt gacgagcaca tcatacctgg ccccgactcc gtcggtcgag acgagcacct
     1621 ggcgttcttg tgcggtcagg ggaccgacgc gcgaggacgg cggcttgacc aaggttcgtt
     1681 gaacgggagc gggcgcgccg tcgggctgga gcagcgagat gagcgcctcg ccgatcttga
     1741 gctcggttat cgcgctctcg acgtcgacat taggattggg cctgaacgtc tcggccgccg
     1801 ccttcaccgc ctgctggtcg cgcggagtga aggcattgag cttgtgctgt atgcgattgc
     1861 cgagctgggc ggcgacagta tcggggatgt cgatcggatt ctgggtgatg aaataaacgc
     1921 cgacgccctt ggagcggata agccggacca cctgctcgat cttgtccaga agcgccttgg
     1981 gggcatcgtc gaacagcagg tgtgcctcgt cgaagaagaa gcagagcttc ggtgccgggc
     2041 ggtcgcccac ttccggcagt tgctcgaaca attcggacag cagccacaga aggaaggtcg
     2101 aatagagtcg agggctcgac atgagcttgt cggcggcgag gatattgacg accccgcgcc
     2161 cctcctcgtc gacggcgatg aaatcgtcca gctcgagagc gggctctccg aagaaattgt
     2221 ccccgccctg gcttcgaagc tgaagcagcg atcgctggat tgccccgatg gaagccttcg
     2281 agacatttcc atattcaagg gtgagttcgt ccgctgcctc gccgcaggcg accagcatcg
     2341 cctgcaggtc gtcgagatcg acgatcggca tcgattgctt gtcggcgacg tgaaaggcga
     2401 tcgtaaggac accttcctgg acttcgttta ggtccatcag gcgcgatagg agcagcggcc
     2461 ccatttccgt gacggtcgtc cgaatggggt gaccttgttc gccgaacagg tcccaaaatt
     2521 gcaccgggca tccgcgatac tgccagtcgc cgtagccgat ctcccgcgcc cgggccgcga
     2581 aaggctcgtg ggtcttgccc gtcggcgaac ccggcatcgc caggcccgac aaatcacctt
     2641 tgacgtcggc gacgaaggtc ggaatccctg ccgcgcaaaa cccctcgaca attccctgga
     2701 gggtgaccgt cttgccggtc cccgtcgctc cggcgatcaa cccgtggcgg ttggcccgcg
     2761 acagctcgag ccgctgcggc tcgccgccgc cgctacccgc gccgatgaat atggctgcgt
     2821 cgctcactct cgacactttg ccgagcgcgc gaacaagcgc aagcgctaca ttcgttcagc
     2881 cggtcttccc gctaccgggt cagcccttcg gaatttcaac tccgacgaag ccttcgattc
     2941 cggtgccgcg cttgacgagc aggaggacgc tggttcggcc cgccttccgg gcatcctcga
     3001 cagccgccat cagctgggcc ggggttgtga cctttcggcc ctggacggca aggatgacgt
     3061 cgccccgccg aagcttcgtc ccggcgtcgg tggactcgtc gactccggtg acgacgacgc
     3121 cgctcgttcc cggcggcagc ttgagcgcct gcgcaatctg cggagtgatg gcctggagcg
     3181 aaaggccgag cgcctcgctt cgcggacttg cgggcgggtt ctcatccgcc ggaccttcgt
     3241 cgtcctggcc gagctgcctg ctgagctctt cctcggtggg gcgctgggtg atggtcgccg
     3301 cgacattcat ccgcttgccg ccccgaatga tcgtgaccgg gactcgcgac ccgaccggaa
     3361 ggttggcgac gaggtacgac accgtctggt cgggagtgac ttccttgccg ttgatcgcga
     3421 cgatgacgtc gccctgccgg attcccgctt ttgcggcggg ctcgccaggc tggacggtgc
     3481 ggacgatctc gccgacgtct tttggtattc ccattgccgt cgcaatatct tcttcgaccg
     3541 gctgcaggct gacaccgagg tagccgcgtt ccggcctttg gccgcggcga agcgcatcga
     3601 tgaccggctt tgcagcctcg gcggggatgg ccagaccgat accgacattg gttccggtcg
     3661 gcgagatcag cgccgtgttg atcccgatga cattgccgtt gaggtcgaac atcgggccgc
     3721 cgctgttgcc catgttgatg gcggcgtcgg tctggatgta gcggtcatag gcgccgaccc
     3781 cggtgatccc gcggtgaagg gccgagatga tcccggcggt aaccgtgctt cccacgccat
     3841 agggatcgcc gatcgcaagc acccagtcgc cgacccgcgc atgggtgctg tcgccccact
     3901 gcacatacgg caggtttttc gcgtcgattt tgagcagtgc gagatcggca agctggtcgc
     3961 ggccgacgat ccgcgccgaa tattccttgc ggtttgtcag ggtgacggtg accgtgtcga
     4021 cagtcccggt gccgttcgcg ccctggatca agtggttgtt cgtgacgatg taaccgtccg
     4081 gcgaaatgat gaatccggag cccagcgaac cggtctcgcg agacggtgac tgctgctgat
     4141 cgggaatcgg cgcaccgaac tggcgaagga tttcctcgag cgggtcgacc tggcgcctcg
     4201 ccgcgacctt ctgcctggtc gaaatgttga cgactgccgg ctgcagccgt tcggccagat
     4261 cggcgaagga ggacggggcg ccgcgcggtg ccatcgccgc cggcgcgttc tgcgcggtct
     4321 gcgcccctac ggggccggtc gcgagggaaa atgccgttcc acccaccaga agggcggtcg
     4381 cgaccccata ggcatagcgc acttttccgg actcctttga tctcatcgat accccttgat
     4441 ctggactttc accaccgaac taggtgaccg gagtgaacga ggattgaaca tcgatcaccg
     4501 cgacccgccg gagaattcct tcaaatagtc gttctgcggc gacaggataa cggtggtcgg
     4561 cgaaggtttc tccccgccat ctccgagaaa tgtcgtctgg taggactgca tggcccggta
     4621 aaaatcgtaa aagaccgggt ccttgccgaa actggcggcg taggtccggg cagcagcggc
     4681 gtcggcctcg gcgcggatga ttagggcacg cttctggcct tcggcgcgaa tcgatcgcgc
     4741 ctcctgctcg cgcgcggtgc gcatccgctc gaacgcggac tgcagcggcg ttccatcggg
     4801 aaggtcggcc ttcttgatcc gaacgtcgac gatctcggcg ccatattgct gggcaacccg
     4861 gttgagcgcg gtccgcacgt cttccatgac ccccctccgc tcgggcgaaa ggagcgcagc
     4921 aaatggcacc cttccgagct cgttgcgaac ttcggagccg aggatgggcc ggatggcgtc
     4981 gttgagccgc ttctcgttgc cggcggtgac atacatccgc agcgggtcga cgatccggta
     5041 acgcgcgaag gcatcaacct cgagccgccg ctgatcggtc gacaggaccg gctggcggat
     5101 catgtccacg tcgagaagac gcttgtcgat ccacacgatc tgctcggcga acggaatgcg
     5161 ccaggtgagg ccggcgccgg cgccaccaac cggggtacga ggatcatatg cgttcaggat
     5221 ccggacgggc ttgccgaagc ggacaatgac gccctgccgg gtctccggaa cgatcgggaa
     5281 agacatcacc gcgaccagta gaagcaacag cgccgttccc gcggtgacga gtggatggcg
     5341 tttgacgaag ccggtcactg ggcggccccc ccctgggcct gcgcttgcgc ccgcttcttg
     5401 acttcaggca acggcaggta gggcgttacg ccgggcgcct cgacgatcgt cttgtccacg
     5461 ttcgagagaa ccttctccat cgtctcgtaa tacattcgcc gccgagtgac atcgggagcg
     5521 agccgatatt gttcgtacac cttgtcgaac gcggtcgcct cgccctgcgc cttttgcgcg
     5581 agctgctgcg aataagcggt ggctccgttg acgaagcgtt gcgcgtcctg ctgcgcggcc
     5641 gacacgtcct tgaaggcgtc gatcaccgcc tgcggcggat cggcttcgcg gattgcgacg
     5701 ccacggatag tgactccggc gttgtaggtg tcgagaatcc tctgcatcgt ctcggcgacg
     5761 cgcgcctcta tctcgcttcg ccggtcaccg atcgcgtcgt ccaaagtgac gctgctgatg
     5821 acagcccgca tcgcgctttc cgccacctgc cggatcgcct gctcctggtc ttcgagttcg
     5881 aacagatagc tttcgggatc gcggatgctc caccgcgccg aataagcgat gtcgatgaca
     5941 ttctggtcgc cggtcagcat caagtcttcg gtattcgggg agccgaggtc gaccgaccgg
     6001 atgctgttga tgtcgatttt ctcaacgcgc tcgatcggcg acggcagcgt catgctgacg
     6061 cctgggccga gcgtgtagac gtagcgtccg aagcgggtca cgaccccgcg ctcggcggga
     6121 gcgatgctgt ggatgctggt gaaaaccagc cacagcagga tgactccaat cacgccccag
     6181 atcatcatcg aggcattgaa tcgctccgga aagccaccgc cgccaggccc gccaccaaag
     6241 cgcgcgcggc tcttgcgaag gaagtcgtcc agcgaagaca cattgtcccc cgcctcgacg
     6301 tttgcccgct tgccgcgctt gggcggctcg ccccacggcc cgcgcgacgg ctcttcgggc
     6361 ccgtcgccgg agcccttcgg gccccatggc cccttggtat cgctgaagag gccgcgaacg
     6421 cggccgcccc acccggaaat catgctcatg acccgagtat agggagggca attgccgaaa
     6481 aacagtggca agccggccct gagtgcctat ctcgcacggc gaatggagaa ttcggcaaac
     6541 ccactcgacg cactcgatgc gctcggcgac gcaaagcgca tccgctcgcg ccgtctttcg
     6601 cgcggcgtag cgactatcgt cgccgacgcc accggcctcg acgccgatga acgtaagcgg
     6661 ctggaaggca acctgcaggc cgccgcggcc gaaatccatg gcgtcgagga agtccgggtc
     6721 gcgcttaccg cgagcgagcc tcgccgaaag ctcattgcaa tcgccagtgg caagggtggg
     6781 gtcggcaaat cgaccctgtc cgccaacctt gcgatcgcca tcgcgcgcat gggaaacaag
     6841 gtcgggctga tcgacgccga cgtgtacggg ccttcgcaga ccaagatcct cgggaccgac
     6901 cagcggccga ccgccgacga caagcgcctc aacccggtcg aggcgcacgg aatcaggttc
     6961 ctgtcgctcg gccagctggt gtcgcccggc catgcgctgg cgtggcgcgg tccgatggcc
     7021 tccggagctc tctcgcagct ggttgaagcg gactggggcg attgcgaaat ccttgtcgtc
     7081 gacctgccgc ccggaacggg ggacgtgcaa ttgtccctgg tccagaagtc gcggccggac
     7141 ggggcggtga tcgtatcgac tccgcaggcg ctctcgctga tcgacgcgac ccgggcgatc
     7201 gacctgttcg gcaaagtctc ggtcccggtg atcggactta tcgagaacat gtcgggctat
     7261 gcttgtcccc attgcggcga gcagtcggac ccgttcggaa gcggcggcgc cgaagacgcg
     7321 gcaagggaaa tgggaatccc attccttggg cggattccgc tggattcttc tttacgcgaa
     7381 gcgtccgacg ccggcgctcc gcccgccgcc aattcgggca cgcagtcgga cgccttcgcc
     7441 gaaatcgcgc gcaaactcat gagcgccctg gaaactgcgg gcgccgccga tcattctccc
     7501 gcagaggaga taacccatgc ttcgagatga cgaagagatc gccgagctgc tgagcagcgc
     7561 aaggacgatt gcgatggtcg gggcgtccga caagcccgag cgtgcgtcat atggagtgat
     7621 gaagttcctc cagaaacagg gctatcgcgt gttcccggta aacccgaaga tcaccggcga
     7681 gcatgtccac ggcgaatatg tgtggcgcga gctgtcgcag atcggcgagc cgatcgacat
     7741 cgtcgacatc tttcgcaatt ccgaagcggc gggcgaagcg gtcgaccagg cgatcgcggt
     7801 cggcgccaag gctgtctgga tgcaattggg cgttatcaac cgcgaagccg cagaccgcgc
     7861 cgaagccgcg ggtttgaaag tagtgatgaa ccgctgcccc aagatcgaga tttcgcggct
     7921 tggcgttccc gcggtcgtcg attcccccgc cgcctagaag ctccgaccca acgacacgat
     7981 cagacggtag ctgttgtccg gatgggattg gcggatgttc tgccacagcg gaattgcaac
     8041 ggccgccgct gctgaccatc cattggccga attgaaccgg actcccggcg ccgcatagac
     8101 ccaggcgccg ccgctttcgt tctctattac tccagatatc ctctgccgcc cttcccactc
     8161 tccggcgact tccaggattg catcccagct ctggtggccg tgctcggtaa cctcgtgctg
     8221 gtgatgctcg tcgcccgcgt cgtggtggtg ctcttctgcc tcgtggtgat cctcaccggg
     8281 cccgaagcgg aggcagaacg ctattccgcc ctgcagccgg tcgccgagcc gagtccgctg
     8341 cgcccccttg gtcgagaact ggtagagcgc gcttgcggtg acctggagag cgcccttcgt
     8401 cactgccgcc gaaccgccga ccatcgggtc ccagctgccc gttcccggct ggtgctctgt
     8461 ctcgagccgc tcgccgtcgt cgctcgtacg gtgcgtgcct ccggtcggaa gcttcactcc
     8521 gccgaagagt gccaagcgaa cgccctcgtt cccggtcagc cggtatttgg cgagaatgct
     8581 tgcatcgccg aatccggcga ccgttccaag ctgctcgaca gaattgtggg aggcgccccc
     8641 cgagtggctg tgctcgccgg cgcgaaggtc gtcgcggcga acgtagggca attccgcgga
     8701 gacggtgagc ctgtccgtta tcccgtaggc gaaacccagc gagacgttga ggtcatagtc
     8761 ggaatcgtgc gcgtggacat gcattccggc gagcccggcc agctcctcgt cggaccgccg
     8821 gtcggggcgg gtgaacagga atcgcaagcc tgcggccccc tgccctttcg cgagcgtatc
     8881 ggtgccgtgg acggtaagcc cagagccgga gccgacaccg gcggggccgg ggtgatgagc
     8941 aagggcgggg ctggcgatga acgcgagtgc aagcaacgga taggatcgca tggccacgcc
     9001 tttggccgcc ggtaggaaca gccgcaagtc agtagaaaca cgcattgtcg cgcgttcagg
     9061 cggcggcgac ggtcatctcc ggaatcagca gcgtcggcgc atccattccg cgccggaact
     9121 ggaggtcgga agcgggctcc agggtcgcga acatctctac taggttggac gcgatcgtga
     9181 tttcctgcac cgcggggccg atttctccgt cgcgaacgag gaagcccgct gcgccgcggc
     9241 tatagtcgcc ggtcaccggg ttggcgccat gtccgatgag ctcggtcacc agcagcgccg
     9301 agggaaaggc cgagagcaat tcctcgcggc tgcgagtccc tgactccatg tagaagttcg
     9361 aaggcgacac tcccggagcg cttccgactc cccgcgaagc atggcccgtc ggcttgattc
     9421 cgagctggcg agccgaggcg ctgtccgcaa tccacccctt gagaattccg tcggctatca
     9481 aatctttacg gccgactgcc agcccctcgc catcgaatgg cctcgacctg agaccgcgca
     9541 ggcgaagcgg atcgtcgacg accgtcacgc cttgggcaaa tatgcgggta ccaagcttgt
     9601 cctggaggaa actcgacttg cgggcgaccg acgagccgct gatcgcgccg gcgagatggc
     9661 cgagcaacgt gtgcgaaacg cgcgggtcga acaatactgc catcttgccc gacttcggcc
     9721 gttgcgagtt gagcctcgcg accgcgcgct cggcggcgag gcggccgata tcctcggcgg
     9781 aatcgagatc ggacaaatgg cgcgcgctat gccaggcaga atcgcgctgc atcgtcgctc
     9841 cctcgccggc gatcacgctc gccgagcagc tgtaggaggt tgcgcggtag gcgcctgcga
     9901 atcccgcgga cgtggcgagc gcgatagtcg agccggaagc gcttgccgag gcaccactgg
     9961 aattcgcaac accttgcacg gcaagggcag cagcttcggt acttagcgcc cgaatccgaa
    10021 gctcggcagg atcgggctcg agcggatcgg tcgagtccag gtcggggaac ggggcgcccg
    10081 cgagaagctc cgtcggagca aggccggcgt aggggtcctc cggcgcttcg gcggccatgg
    10141 ccagcgcccg cgcaaccagc tcgtcgagcg cttcgctcga caggtccgac gaggcgaccg
    10201 atgccgagcg tgctccaacg aagactcgaa ggccgatcct ctcgccttcg gagcggccga
    10261 catgatcgag ctcgccgagc cgaacctcga cgtccatcga atggctggag gcataaagcg
    10321 cgtcagcggc ctcggcgccg gcgcgacatg cgcgctcgac cagccgctcc gccgcggcgc
    10381 tggattcgtc tcgagaaagc atgcgccgcc gactagcggc tcgaaacgcc gacgaccagc
    10441 atggcgagga aaacaagaaa cccgcaggtg cggttggcgc ggaacagcgc tagcgcgagc
    10501 tcgccgtcgc gcggatcggc acgaagcgcc tggttggcaa gatgcagagc ggcgggcacc
    10561 agcgccacga gggcgagcca atcgggccgg acggaccaca aggccgcgcc ccacaacatc
    10621 accgcaacgg catagaacag gccgactccg agcgcggcct tgtcgccgag gcggagggcg
    10681 ctgctcttga cgccgaccag ggcatcgtcc tccttgtcct ggatcgcata taaagtgtcg
    10741 tagcccacca cccaggcgat gctcccgaac cacagcagca aggccggcca gccgagactt
    10801 tcggtgaccg cgggccagcc gaccagcgcg ccccaggaga agacaagacc gagccacgcc
    10861 tgcggccacc aggtgatccg cttcatgaaa ggataagccg caaccagcgc gacgctggtc
    10921 agcgacacga cctgcgcgat ccggttcaat tgcagaagca cgaccagcgc aacccacagc
    10981 aggatcgcga tcagcaccca agcgcccgcc agaggaacgc gcccgcttgc gagggggcgg
    11041 agccgggtgc gttcgacccg acggtcgagg tcgcgatcga cgatgtcatt gtagacgcaa
    11101 ccggcactgc gcatcgcgaa ggcgccgagg gcgaaccaca ggaacaggtc ccagcggctg
    11161 ccaacccccg ccagtgcgag gctccacgcg cacggccagt agaggagcca cgtcccgatc
    11221 ggacggtcca gccgcatcag cgagccatag ggccgaagcg gcggcggaag cgcgccgatg
    11281 aatccacgcc gctcgctgtc aggaacaatg tctgttctgc tgatcacgac ccggtgtggc
    11341 agcagcgccc ggctggctca agctgaacgt tgtcgttaaa taatggttca atgagttata
    11401 aataatcagg tgcaaacata atgaaccttt tggagctgaa tcaatattca cgcgttggcg
    11461 gtttagaaga agagagctcg cgcttcgaac ggtaggatgc gatgtataag tcgtatttct
    11521 tgaagcgtta cataacgaca ttgcatcttg cacaagatgc taagacggaa agcgagcgct
    11581 cacttcacct tcgaacatta tgttactacc gcgatctaat cggtttgtgc ggtggccgcc
    11641 gctcatcgaa agcaagtaag tagcgccttc gcggccgcgc cgctaagcca ccccgatgcc
    11701 cgcaactcca gcctggccgc cgaaaagtct gccgcgcctg ttcttgcgtc ggccactcgc
    11761 cgccgatgcg accgtggtgc tcgaccccga ccaggctaac tacctcggga acgtcttgcg
    11821 cctcggacag ggggcggaac tgctcgtctt cgacggagag tccggcgaat ggctcgcgcg
    11881 gatcacggac acgggcaaaa agcgaatgac tctcctggtc gaacgctgca cccgggaagc
    11941 ggagagcgtc cccgatgttt ggctcgcctt cgctccggtc aagcgagcgc aaacggactg
    12001 gctggtcgaa aaggcgaccg agctcggcgc cgcgcggctg gttccgatca taacccatcg
    12061 cacgatcgtc gagcgggtga agctcgagcg cctgcaatcg atcgccatcg aagccgccga
    12121 gcaatgcggc cgcactcgcc tgcccgcaat caccgagccg cttccgctgg cacgcttcct
    12181 tgccgagcgc gacggagccc ggacgctcta cttcgcggac gaggcaggag gcgaagcagc
    12241 agcaaccgct tttcagcccg gtgccgcggt cattctcact ggccccgaag gcggcttcac
    12301 cgacgacgag cgcgacgcga tccggggcca aggcaatgtg gttgcaatct cgcttggccc
    12361 gcgaatcctg cgcgccgaaa cagcagcgct cgcggcgctc acgatctata tggcgctggc
    12421 cggggactgg cgctaagcgc cgccgcacat gacgacgcgg accgacgaca gcgaaagccc
    12481 gccgatcgag agccgcgccg acctgctggc gacattctcg gccggcgaga agccccgcga
    12541 gacctggctc atcggcacgg aacacgagaa attcgtctat cgctgcgccg atcatcgggc
    12601 gccatcctat gaggagccgg gcgggatccg cgacctgctg atggggctga ccgagttcgg
    12661 ctggcggccg gtgatcgagg gcggcaacgt cattgcgcta agcgggccgg acggcaccat
    12721 cagcctcgag ccggcgggcc agttcgagct gtcgggcgcg gccgtcgaaa accttcacca
    12781 gacctgcacc gaagccgatc gccatctaaa gcagtgcaag gcgatcggcg agcgcctggg
    12841 agtcggattc ctggggcttg ggatgtggcc cgacaaggcg cgctcggagc tgccggtcat
    12901 gccgaaaggc cgctacggga tcatgctgcg ctacatgccc aaggtcggca agctcggcct
    12961 cgacatgatg ctgcgcacct gcacgatcca gaccaacctg gattattcgt cggaagccga
    13021 catggtccgc aagtttcgcg tcgggctcgc gctccagccg gtggcgacgg cgctattcgc
    13081 caattctccg atcaccgagg gcaaaccgaa cggctatctg agctaccgaa gccacatctg
    13141 ggaagacacc gatcccgacc ggacgggcat gctccccttc gtcttcgaag acggcttcgg
    13201 gtacgagcgt tactgcgact atgcgctcga cgtgccgatg tatttcgtct tccgcgacgg
    13261 caaatatgtc gacgtcgccg gcgagagctt tcgcgacttt ctcgacggca agctgccgca
    13321 acttcccgga gaaaagccca ggatttccga tttcatcgac catttgtcga caatcttccc
    13381 cgaggtccgt ctcaagagct tcctcgaaat gcgcggcgcc gacggcggcc cgtggaaccg
    13441 gatttgcgcg cttccggctt tgtgggtcgg actcctctac gacaatcagg cgctcgacgc
    13501 cgcctgggac ctcgcaaaaa actggagcaa cgaggagcat gagcagcttc ggcgcgaggt
    13561 tccgaaggta gccctcaacg ctcctgtgcc cggcggaggc acgatgcacg acctggcgcg
    13621 gaccgtgctc cagatcgcct cggacggcct gacccgccgc gcgcgcctca attcggctgg
    13681 cgacaacgaa ggcggtttcc tcgacccgct caacgaaatc gtcgccagcg gcaagacccc
    13741 ggcggagcgg ctcctcgacc tctatcacgg caggtggcaa ggggacgtca gccgagtcta
    13801 ttcggagatg agcttctaga tggatatcca cagcacccag cgccgaaccc tctatccggc
    13861 gatcgagccc tacaaatccg gcaagctcga ggtcggcgac ggccacagcc tgtactggga
    13921 attgtgcggc aaccccgacg gcaagccggt cgtcttcctt cacggcggcc ccggcgccgg
    13981 aatcagcgcc gaccaccggc gccagttcaa tcccgaaaag tacaagatcc tgctgttcga
    14041 ccagcgcggc tgcggcaaat cgactccgca cgccagcctg gacgcgaaca cgacctggga
    14101 catcgtcgcc gacatcgaga agctccgaac cgagatcgcg cgggtcgaca aatggatggt
    14161 attcggcggc tcgtggggct cgaccctgtc gcttgcctat gccgagaccc accccgaccg
    14221 ggtgacggag ttggtgcttc gcggcatttt cctgttcgac cgctacgagc tcgactggat
    14281 gtaccgcgaa ggcggcgcgt cgcagctata cccggacaag tgggaagaat tcgtcgcacc
    14341 gatcccgcag gaggagcgcg gcgatctcgt cgaagctttc cggaagcggc tgaccggcga
    14401 tgatcccgag gttcggctgc aatgcgcgaa agcctggagc aagtgggaag cggacatcgt
    14461 caccctgctt cccgacgagc atgtggtcga ggaattcacc gattccgaaa aagcgatcgc
    14521 gatcgcgcgc attgagaacc attacatgtc caacggcggc tggctcgacg aagggcagct
    14581 gcttcgcgac gcgaccaagc tgaagggcat cccggcggtc atctgccagg ggcggcacga
    14641 ctgctgcacc ccgcccgcag cggcgtgggc gcttcacaag cgctggcccg aagcggagct
    14701 cgagatcatc cccgacagcg gccacctgtt caacgaaccg ggcatgatcg acgcactggt
    14761 gcgcgcgacc gaccggttcg cgggcaacta gcagagggaa cccgaagctg cgccgatgac
    14821 tctaaccgag gagcgaccgc tccacgggaa agaggatcga gcaatgagtg cgcagaatcg
    14881 ccggacctac tgggaagaca cctgctctcc ggacagcttc ccggcactta acggcgacct
    14941 ggatgtcgac gtcgctatcg tcggcggcgg catagtcggc attgccgcgg cgcgaatgat
    15001 caaggatgcc ggcatgaccg ccgcggtcgt cgaagcccgg cgagtcgggc agggagtctc
    15061 gggcaaggca acggccaagg tcacgtcgca gcacggcctt cgttaccgaa cgatcgagaa
    15121 gaagttcggg gaagacaaag cccgcctcta cgccgatgcg caggaaacgg ggcttcgccg
    15181 aattgtcgag ctgtcccgca cttacggctt cgacgccgac atcgagaccg tgcccgccta
    15241 cgtctacacg cgcgaggagg ggcacgtgga ggaaatcgaa aaggaggtcg agctcgctcg
    15301 ccgcctcggc ctgcccgcga gcgtcactcg cgacaccggc ctcccgtttg acgtcaaggc
    15361 ggcaatgcgc tgggacgacc aggcgcaatt ccacccgatc aaattcgtcg ccggcctcgc
    15421 gcagaccatt accggcgacg gcagccacgt cttcgagaac agccgggtta cggactggga
    15481 cccgaaacgg gaggtaaccg accgcggcac cgttaaggga agcgctaccc ggctattata
    15541 tcggggtcga agagtcggag cattcgatcc gcacccaccg ctcgaacggt cgcatccatg
    15601 cagtgtgcgc cggc
//
LOCUS       DATAKH010000150         3080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21934,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000150 DATAKH010000000
VERSION     DATAKH010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21934"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VHN55_06265"
     CDS             <1..334
                     /locus_tag="VHN55_06265"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007015050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX2803572.1"
                     /translation="VEGALTAIERPSAAPDLPVDVAGTAFQEAVWRELRKIPLGETRS
                     YAEIAAAIGQPKAVRAVGSANGDNHVAVLIPCHRVIRSDGSLGGYAGGLDRKRRLLDA
                     EGAAKTLL"
     gene            411..719
                     /locus_tag="VHN55_06270"
     CDS             411..719
                     /locus_tag="VHN55_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803573.1"
                     /translation="MQFNFRDFLSARRGSDSAGERALAEFRLIMIWIAAIGAVMVAVA
                     LLYLAATGELDANLVVATVVGVFFSVLLGCGLFAAAFFSDKSGHDRSVSDAATRHESD
                     "
     gene            complement(727..2895)
                     /locus_tag="VHN55_06275"
     CDS             complement(727..2895)
                     /locus_tag="VHN55_06275"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEX2803574.1"
                     /translation="MALSRARVVTLNAALGPLDYRVPDGMAVEPGSVVVAPLGPRQLI
                     GVVWEPERLQTEEVGDNRLRPLISVMEVPPVPAAVRRLVEWTADYYLAPIASVLRMVL
                     PSSAALEGPRQLTEYAPTGRTPDRLTPQREKALAGIEGRQGTIRELAEHAGVSDSVMR
                     GLVNAGALEPVQVTADRPLACPDPDFAPPELTDEQKSAAKSLSGTIGSGFDPVLLDGV
                     TGSGKTEVYFEAIAECLRQGKQALVLLPEIALTEPFLKRFEARFGCEPVAWHSDLRSS
                     QRRRAWRGISSGEAKVTVGARSALFLPYPNLGLIVVDEAHEPSFKQEDGVQYHARDAA
                     VMRAKFEEVPVVLSSATPAIESRHMAEIGRYREVTLASRFAGARLPEIRAIDLRQDPP
                     PRGRWLAPTLVAELEANLGDGEQSLLFLNRRGFAPLTLCRHCGHRFQCPNCTAWMVEH
                     RLMHRLACHHCGHVMPPPKTCPECGEEDSLVACGPGVERIADEVADLFPQARTAIVTS
                     DTIWSPARAAEFVAAMEGGEIDIVIGTQLVTKGYHFPNLTLVGVVDADLGLQGGDFRA
                     AERSFQQIQQVAGRAGRGDKPGRVLVQTHDPDAPVIEALVSGDGPGFYAAETEARREA
                     AMPPFGRLAAIIVSAEDAGEAESVARRIGNAAPNVEGMAVFGPAPAPLAMLRGRHRQR
                     LLVHAARLLDVQDVIRDWLGGVEWGSKVRVNVDVDPYSFL"
BASE COUNT          510 a          988 c         1050 g          532 t
ORIGIN      
        1 cgttgagggc gcgctaaccg ccatcgagcg gccctcggca gcgcccgacc ttcccgtcga
       61 cgtcgcggga accgccttcc aggaagccgt gtggcgagag cttcgcaaga tcccgttggg
      121 agagactcga agctatgccg aaatcgccgc tgcaattgga cagccgaagg cggtgagagc
      181 ggttggcagt gcgaacggcg acaaccatgt cgcggtcctc atcccgtgtc accgcgtgat
      241 ccgcagcgac ggtagcttgg gcggctatgc cggcggcctc gaccgcaagc gtaggctgct
      301 agacgcggaa ggggcggcga aaacattact ttaggcgggc cgcctgttgc cggctcttgc
      361 gtagattccc ttattgtacg ctgcctgcca atccccattt gaacttggtc atgcagttca
      421 acttccgcga tttcctctcg gcccgacggg gatccgacag cgcaggcgag cgcgcgctgg
      481 ccgagtttcg gctaatcatg atctggattg ctgccattgg ggccgtcatg gtcgccgtgg
      541 cactgcttta tctcgccgcc accggtgagc tcgatgcgaa tttggttgtc gcaacagtcg
      601 ttggagtctt cttctcggtc ctgctcggct gcggactctt cgcggccgcc ttcttcagcg
      661 acaaaagcgg gcacgacagg tcggtttccg acgcggcgac ccgtcatgaa tcggactgaa
      721 ttcccctcaa agaaagctgt acgggtccac atcaacgttc actcgtactt tggagcccca
      781 ttccactccc cccagccagt cgcggatcac gtcctggacg tcgaggagcc gggctgcgtg
      841 tacgagcagg cgctggcggt ggcggccgcg aagcatcgcc agcggcgcgg gcgcgggacc
      901 gaacacggcc atgccctcaa cattgggcgc ggcgttgccg atccgccgcg cgacgctttc
      961 cgcttcaccg gcgtcttccg ccgaaacgat aatggcggcg aggcgaccga acggcggcat
     1021 cgcggcttcc cgacgtgcct cggtctcggc ggcatagaag ccggggccgt cgccggaaac
     1081 gagtgcttcg ataacgggag cgtcggggtc gtgggtctgc acgagcactc gtccgggctt
     1141 gtcgccgcgg ccggcgcggc ccgcgacctg ctggatttgc tggaagctgc gctcggcggc
     1201 gcgaaaatcg ccgccctgca agccaaggtc ggcatcgacg accccgacga gcgtcaggtt
     1261 cggaaagtga tagcccttgg tgacgagctg cgttccgatg acgatgtcga tctcgccgcc
     1321 ttccatcgcc gcgacgaact cggccgcccg ggccggcgac cagatcgtgt cagaggtcac
     1381 gatagcggtt cgtgcttggg ggaacagatc ggcgacttcg tcggctattc gctccactcc
     1441 gggcccgcag gcgaccaggc tgtcctcctc gccgcattcg ggacaggtct tgggcggcgg
     1501 catcacgtga ccgcaatggt ggcaggcgag acggtgcatc agccggtgct cgaccatcca
     1561 ggcggtgcag ttcgggcact ggaagcggtg gccgcaatgg cggcacaagg ttagcggggc
     1621 gaagccgcgt cggttgagga acagcaggga ttgctcgccg tcgccgagat tagcctccag
     1681 ctcggctacc agcgtcggag cgagccatcg tccccgcggc ggcgggtcct gcctgaggtc
     1741 gatcgcccgg atctccggaa gtctggcccc ggcgaagcgg ctggccagcg tgacttcgcg
     1801 gtagcggccg atctcggcca tgtggcgact ttcgatcgcc ggagtcgccg aggaaaggac
     1861 gacgggaacc tcttcgaact tggcgcgcat cacggctgcg tcgcgggcgt gatactggac
     1921 cccgtcctcc tgcttgaagc tgggctcgtg cgcctcgtcg acgacgatga ggccaaggtt
     1981 cgggtagggg aggaacaggg cggagcgagc gccgacggtg accttggctt cgccactcga
     2041 gattccgcgc caagcccgcc gccgttgcga ggagcgcagg tcggaatgcc aggcaaccgg
     2101 ttcgcagccg aaccgggcct cgaagcgctt gaggaatggc tcggtcagcg caatttcggg
     2161 cagcagcacc agcgcctgct tcccctggcg aaggcattcc gcgatggctt cgaaatagac
     2221 ttccgtcttg ccagaaccgg tcacgccatc gagcaggacc gggtcaaatc cgctgccgat
     2281 ggtgccggac agcgacttcg cggccgattt ctgttcatcc gtcagctcgg gcggcgcgaa
     2341 atcggggtcc gggcaggcga gtggcctgtc ggcggtgact tgcaccggct caagcgcgcc
     2401 ggcgttgacc agtccgcgca tgaccgaatc gctgaccccc gcgtgttcgg caagctcgcg
     2461 gatcgtaccc tgccgaccct cgattccggc gagcgctttc tcgcgctgcg gagtaaggcg
     2521 gtcgggggtg cggccggtcg gcgcatattc ggtcagctgg cgtggaccct cgagcgctgc
     2581 cgacgaaggc aggaccattc tcagcaccga tgcaatcggc gcgagataat agtccgctgt
     2641 ccactccacg agccgccgga ccgcggccgg gacaggcggc acctccatca ccgagatcag
     2701 agggcggagc cgattgtcgc cgacttcctc ggtttgaagc cgctccggct cccagacgac
     2761 gccgatcagc tgccgcggcc cgagcggcgc gacgacgacc gagccgggct cgaccgccat
     2821 gccgtcgggt acacgatagt cgagcggacc cagggcagca ttgagagtga cgacgcgggc
     2881 gcgggagaga gccatcgtgc cgtgtcattg ccggagactg ggtcggtgtc tagaaagcca
     2941 tcgcgaggtt gcggggatga ggctgctgca aaaattgtcc catgccattt gcgcgctcgg
     3001 cgcagtctac tttcttgccg cctgccatga cgttgatttc gacgggacgg tcgagcggcc
     3061 ggcgttcagg gaaaatggcc
//
LOCUS       DATAKH010000151         4456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10793,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000151 DATAKH010000000
VERSION     DATAKH010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4456
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10793"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VHN55_06280"
     CDS             complement(<1..607)
                     /locus_tag="VHN55_06280"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010185453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019674 - NAD metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEX2803575.1"
                     /translation="MGLLSSQTEVAKAAAAMLRRRYRWAESDSAETLVALGGDGFMLQ
                     TLHQMLESGRPRPVFGMNRGTVGFLMNDWRLDRLAERIEQAKAIRVAPLEMTARTVSG
                     ETFTRAAINEVSLLRETRQTAKIEVSVNGHAAIPELACDGVLVATPAGSTAYNLSAGG
                     PILPLQAKMLALTAISPFRPRRWSGAILPDDTDICLRVLEPQ"
     gene            complement(729..3926)
                     /gene="mfd"
                     /locus_tag="VHN55_06285"
     CDS             complement(729..3926)
                     /gene="mfd"
                     /locus_tag="VHN55_06285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEX2803576.1"
                     /translation="MLLQQPLKKPQLLLLTANGATQRVLSPFRIRQLTRRIAAGDRVD
                     RDSLIGQLAALGYQRTDSVAEHGEFAVRGSLVDLFPSGERDALRLDFFGDEIESIRRF
                     DPADQRSTGSARAFTLMPASEALLDDDSIKRFRERYRETFGAAATSDPLYQAVSDGRR
                     LAGMEHWLPLFEDRLSTVFDHLGDGDVILRDSGTDGALDSRWEGIDDYFQNRTRAMQS
                     EPGSYRPLPPGALYAPRGEWEDAVRCQPVHRSSPFPEADGAKTIDFGVEAARDFAPER
                     ARNENIYEAVAEHIAKLRRSGRKVVLASYSKGARERLSGLLKDHGLKAQAPVDNWQQA
                     LGSKTQPAVLVLPLDHGFSTPDVAVLTEQDMLGDRLVRRRKRRKSADAFLAEIASLSP
                     GDLVVHAEHGIGKYEGLTSIQVGKSPHDCVAIAYAGGDKLYLPVENIELLSRYGSESE
                     GGATLDRLGGEAWQRRKSRMKERIREIAGELINVAAMRATRPATVIAADSAFPQFVDR
                     FPYEETDDQERAIEEVLSDLEAGKPMDRLVCGDVGFGKTEVALRAAFVVAMSGQQVAL
                     ICPTTLLARQHYANFMERLQGFPIEVGRLSRLVPAAEAKRTKEGLEKGTVDVVIGTHA
                     LLAKGLKFKRLGLVIVDEEQHFGVAHKERLKSLKADVHVLTLTATPIPRTLQMAMSGL
                     RELSVIQTPPVDRLAIRTYVTPWDHVVIREALLREHYRGGQSFFVAPRIADLPDLEEW
                     LREEVPEVKFITAHGQMSATQVEERMSAFYDRKYDVLLSTSIVESGLDIPSANTLIVH
                     RADRFGLAQLYQLRGRVGRAKVRAYAYLTTPADQRITETAAKRLQVLADLDSLGAGFQ
                     LASHDLDIRGAGNLLGDEQSGHIKEVGFELYQSMLEDAIVEAKAGGVKREEDFSPQIS
                     VDAPILIPEAYVPDLDLRMGLYRRLGDLEDKDSIEEFAAELIDRFGPLPDETSNLLRI
                     VETKLNCKKAMVAKLDTGPRGAVVTFAPSGFPDLQGLLGYIDRLKGSAKLRPDSKLSV
                     SRDWRTPEDRLNGALQLSLGLSRVAAAGQRTMEPA"
     gene            3930..4037
                     /locus_tag="VHN55_06290"
     CDS             3930..4037
                     /locus_tag="VHN55_06290"
                     /inference="COORDINATES: protein motif:HMM:NF015870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803577.1"
                     /translation="MDILAWASGTAQAPERYQGPMLEALQKLDYIPIRR"
     gene            4034..>4456
                     /locus_tag="VHN55_06295"
     CDS             4034..>4456
                     /locus_tag="VHN55_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEX2803578.1"
                     /translation="MSEPLQRILLAKEPLTLAGVPAGFLPWLAADLSRAAHGRSKPSR
                     AVVVAADEAAMRALADTVPLFAPDVDVLTLPAWDCLPYDRASPALRVMAERLSALNAL
                     QQPLKKPQLLVITANGATQRVLPPFRIRQLTRRIAPGER"
BASE COUNT          727 a         1432 c         1506 g          791 t
ORIGIN      
        1 gttgaggttc cagcacgcgc aggcagatgt cggtgtcgtc gggaaggatc gctcccgacc
       61 agcggcgcgg ccggaaagga ctgatcgcgg tcagtgccag catcttggcc tggagcggaa
      121 ggatcggccc tccggcggac agattatagg cggtcgagcc ggccggtgtc gccaccagga
      181 ctccgtcgca agcgagctcg ggaatggctg catggccgtt caccgacact tcgatcttcg
      241 cggtttgccg cgtttcgcga aggagcgaga cctcgttgat cgccgctctc gtgaacgtct
      301 caccgctcac cgtccgcgcc gtcatttcta gcggggcgac gcggatcgcc tttgcctgct
      361 cgatccgctc cgctagccgg tcaagccgcc aatcgttcat caggaagccg acggtaccgc
      421 ggttcattcc gaacacaggc cggggccggc cgctttcgag catctggtga agcgtctgga
      481 gcatgaagcc atcgccgccc agtgcgacca gggtttcagc ggagtctgac tccgcccaac
      541 gatagcggcg acgaagcatg gccgcagcgg ctttcgcgac ctccgtctga gacgagagca
      601 gcccgatccc gaggcttgcg agatcgccct tcgcagactt cgctggcgtc gaggaatcgt
      661 tcgggctcaa gtcgctactc cggatggctg ccaagcataa tcgcaaagcg acggggagcc
      721 gaatcggttc acgcaggctc catcgtgcgc tggcccgcgg cggcgacccg cgacaacccc
      781 agcgaaagct ggagagcacc gttcagccgg tcttcgggtg ttcgccagtc gcggctgacc
      841 gagagcttgc tgtcgggtct gagcttggcc gagcctttca ggcgatcgat atagccgaga
      901 aggccctgga ggtcggggaa gccgctcggc gcgaacgtca cgaccgcgcc gcgcggcccc
      961 gtgtcgagct tcgcgaccat cgctttcttg cagttgagct tcgtctcgac gatcctcagc
     1021 aggttcgacg tttcgtccgg aagaggaccg aaccggtcga tcagctcggc ggcgaattcc
     1081 tcgatcgagt ccttgtcctc caggtcgcca aggcgccggt aaaggcccat tcgaaggtcg
     1141 aggtcgggaa cgtacgcctc ggggatgagg atcggcgcgt cgacgctgat ctgcggcgag
     1201 aagtcctctt ctcgcttcac tccgcctgcc ttcgcctcga cgatcgcgtc ctcaagcatc
     1261 gattggtaga gctcgaaccc gacctccttg atgtgtcccg actgctcgtc gccgagaaga
     1321 ttgccggcgc cgcgtatgtc gaggtcgtgg ctcgccagct ggaatccggc cccaaggctg
     1381 tccaggtcgg cgagcacctg cagcctcttg gccgctgtct cggtgattcg ctggtcggcg
     1441 ggcgtcgtca gataggcgta tgcgcggacc ttggcgcgcc cgacccggcc gcgaagctgg
     1501 taaagctggg caaggccgaa tcggtccgcg cggtggacga tcagagtgtt cgcactggga
     1561 atgtcgaggc cgctttcgac gatgctggtc gacagcagga cgtcgtactt gcggtcgtaa
     1621 aaggcgctca tccgttcctc gacctgggtt gcgctcatct ggccgtgggc ggtgatgaac
     1681 ttcacctccg gaacttcctc gcggagccac tcctcgaggt cgggaaggtc ggcgattcgc
     1741 ggggcgacga agaagctctg cccgccgcga taatgctcgc gaagcagcgc ctcgcggatg
     1801 acgacatggt cccacggggt gacgtaggtg cggattgcca gccggtcgac gggcggggtc
     1861 tggatgacgc tcagctcgcg aaggccgctc atcgccatct gaagcgtgcg ggggatcggg
     1921 gtggcggtca gggtcagcac gtggacgtcg gccttgagcg acttcagccg ctccttgtgg
     1981 gcgactccga aatgctgctc ttcgtcgacg atgacgagcc cgagccgctt gaacttgagc
     2041 cccttggcga gaagcgcgtg ggtgccgatg acgacgtcga ccgtgccttt ctccagcccc
     2101 tccttcgtgc gcttcgcctc ggccgccggg acgagccgcg aaaggcgtcc gacctcgatc
     2161 gggaagccct ggagccgttc catgaaattt gcgtaatgct ggcgtgcgag aagggtcgtc
     2221 gggcagataa gcgcgacctg ctggcccgac atcgccacaa cgaacgcggc gcgaagcgcg
     2281 acctcggtct ttccgaatcc gacgtcgccg cacaccagcc ggtccatcgg cttaccggcc
     2341 tcgaggtcag acaggacctc ctcgatcgct cgctcctggt cgtcggtttc ttcgtagggg
     2401 aagcggtcga cgaattgcgg aaaggcggaa tcggcggcga tcacagtggc cgggcgggtc
     2461 gcgcgcatgg cggcgacatt gatcagctcg cccgcgattt cgcggatccg ttccttcatc
     2521 cgcgacttgc ggcgctgcca ggcctcgccg ccaagccggt cgagggtggc gccgccttcg
     2581 ctttcgcttc cgtagcgact cagaagctcg atattctcga cgggcaaata gagcttgtcg
     2641 ccgccggcat aggcgatggc gacgcaatcg tgcggcgact taccgacctg gatcgaagtc
     2701 agcccttcat atttgccgat gccgtgctcg gcgtggacga cgaggtcgcc gggcgagagg
     2761 gaggcgattt cggcgaggaa ggcgtcggcg ctcttgcggc gcttgcggcg gcggacgagc
     2821 cggtcgccga gcatgtcctg ctcggtgagc acggccacgt cgggggtgga aaagccgtga
     2881 tcgagcggta gcactagaac cgccggctgt gtcttgcttc cgagcgcttg ctgccagttg
     2941 tcgaccggcg cctgcgcctt aagtccgtga tccttgagca ggcccgacag tcgttctcgg
     3001 gcgcccttgc tgtagcttgc gagaacgact ttgcggccgc ttcggcggag cttggcgata
     3061 tgttcggcaa ccgcctcgta gatattctcg ttgcgcgccc gctcgggagc gaagtcacgg
     3121 gccgcctcga ctccgaaatc gatcgtcttc gcaccgtcgg cttccggaaa cggcgagctt
     3181 cggtggacgg gctggcagcg gacggcatcc tcccactcgc cgcgcggcgc atagagcgcg
     3241 cccggcggca gcgggcgata gctgccgggt tccgactgca tcgcccgggt ccggttctga
     3301 aaatagtcat cgataccttc ccagcgcgaa tccagcgccc cgtcggtccc ggaatcgcgg
     3361 aggatcacgt caccgtcgcc gagatgatcg aaaacggtcg aaagccggtc ttcgaacagc
     3421 ggcagccaat gctccatgcc cgccagccgc cgcccatcgg acacggcctg gtacagcggg
     3481 tcgctggtcg cggcggcgcc gaacgtttcc cgatagcgtt cgcggaagcg cttgatgctg
     3541 tcatcgtcga gcaaagcttc ggacgccggc atcagcgtga acgccctggc cgagccggtc
     3601 gaccgctggt cggctgggtc gaagcggcga atgctctcga tctcgtcgcc gaaaaagtcg
     3661 agccggagcg cgtcgcgctc acccgaaggg aacaggtcga cgagcgagcc gcggactgcg
     3721 aactcgccat gttcggcgac ggagtcggtg cgctggtaac ccagggcagc cagctggccg
     3781 atcagggaat cgcgatcgac ccggtcgccg gcggcgatgc gccgagtcag ctggcggatt
     3841 cgaaaaggcg agagcactcg ctgggtcgcg ccgttggcgg tgagcaggag gagctgcggc
     3901 ttcttcagcg gctgctggag gagcaggacg tggacatcct cgcctgggca tccggaaccg
     3961 ctcaggctcc ggaacgctac caaggaccga tgctcgaagc gctgcagaag ctggattaca
     4021 tcccaatccg ccgatgagcg agccgcttca gcgcatcctg ttggctaaag agccgctcac
     4081 gctggcaggc gttccagcgg gtttcctgcc ttggctcgcg gccgacttgt cgcgagccgc
     4141 gcacgggcga agcaagccgt cgagggcggt ggttgttgcc gctgacgaag cggcgatgcg
     4201 ggcgctggcg gacaccgttc cgctgttcgc gcccgacgtc gacgtgctca ccctgccggc
     4261 gtgggactgc ctgccttacg atcgcgcttc gccagcgctt cgggttatgg ccgagcgact
     4321 ttcggcactg aatgccctgc agcagccgct gaagaagccg caactcctag tgatcaccgc
     4381 gaacggcgcg acccagcggg ttctcccgcc ttttcgaatc cgccagctca ctcggcgcat
     4441 cgcgcccggg gagcgg
//
LOCUS       DATAKH010000152         9498 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_25636,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000152 DATAKH010000000
VERSION     DATAKH010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9498
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25636"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..954)
                     /locus_tag="VHN55_06300"
     CDS             complement(<1..954)
                     /locus_tag="VHN55_06300"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010237575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX2803579.1"
                     /translation="MALSLELIVFLPLIAAIIAGLGGPWIGKPAAKVLTTGALFVGAA
                     LSWPIFFSYIAGGAEAQVVPVLEWIRSGDLQVEWALRVDALTAVMLVVVTTVSSLVHL
                     YSWGYMEEDPGQTRFFAYLSLFSFAMLMLVTADSLVQMFFGWEGVGLASYLLIGFWYH
                     KPSANAAALKAFVVNRVGDFGFSLGIFGTFLVFGTVSIPAILAAAPAMAGSSIGFAGM
                     RVDTMSLLCILLFIGAMGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMVCR
                     LSPMFEVAPIALHVVTYIGAATCFVAATIGTAQNDIKRVVAY"
     gene            complement(960..1265)
                     /gene="nuoK"
                     /locus_tag="VHN55_06305"
     CDS             complement(960..1265)
                     /gene="nuoK"
                     /locus_tag="VHN55_06305"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003051614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEX2803580.1"
                     /translation="MIGLGHYLTVAAILFVLGVLGIFINRRNVILMLMAIELILLAVS
                     INLVAFSAFLGDLSGQVMAMFVLTVAAAEAAIGLAILVIFFRRKGSIAVDAADRMRG"
     gene            complement(1262..1867)
                     /locus_tag="VHN55_06310"
     CDS             complement(1262..1867)
                     /locus_tag="VHN55_06310"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008994015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEX2803581.1"
                     /translation="MIALIAFYLFATLTIASAVAVIFARNPVHSVLWLILAFFNAAGL
                     MLLAGAEFIALLLVIVYVGAVMVLFLFVVMMLNIDFATLRSGFTRNLPFGIIVALVLL
                     AEMVLAVSAWKAGAGISGAAPPEARVPNIVALGELLYSRYLFPFEIAGLVLLVAMIGA
                     IVLTHRSRPDARPQDISKQVRRRPEDAVKLTQPEVGEGVKL"
     gene            complement(1893..2375)
                     /gene="nuoI"
                     /locus_tag="VHN55_06315"
     CDS             complement(1893..2375)
                     /gene="nuoI"
                     /locus_tag="VHN55_06315"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006959720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEX2803582.1"
                     /translation="MIAHWIKSFALWEFIGAHWLTLKYFFKPKATINYPYEKAPQSPR
                     FRGEHALRRYPNGEERCIACKLCEAICPALAITIEAEPREDGSRRTTRYDIDMVKCIY
                     CGLCQEACPVDAIVEGPNLEFATETREELLYDKAKLLANGDRWEQAIAANLAADAPYR
                     "
     gene            complement(2372..3421)
                     /gene="nuoH"
                     /locus_tag="VHN55_06320"
     CDS             complement(2372..3421)
                     /gene="nuoH"
                     /locus_tag="VHN55_06320"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEX2803583.1"
                     /translation="MTAYFQNWFTYEWSWFLATIVGILVIALPLMLAVAMIIYADRKI
                     WAAMALRRGPNVVGPWGLLQSFADGLKVFLKETIVPSAANKGLFMIAPIVSFTVALIV
                     WAVIPFDLGVVLADINVGLLYVLAASSLGVYGVIVAGWASNSKYPFFSALRAAAQMVS
                     YEVSIGFVLISVVLYANSFNLTEIVMMQQGHVLGLLNGFGFNPLLFPMAVVFLISSMA
                     ETFRTPFDLVEAESELVAGFQTEYSSMSFALFWLGEYGNVLLMCALNAILFWGGFLPP
                     IDWAPLYWIPGILWLFAKILFFFFVFSWVKATVPRYRYDQLMRLGWKIFLPLSIIFVV
                     LVSGWLMLTRYGGAS"
     gene            complement(3418..5430)
                     /gene="nuoG"
                     /locus_tag="VHN55_06325"
     CDS             complement(3418..5430)
                     /gene="nuoG"
                     /locus_tag="VHN55_06325"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HEX2803584.1"
                     /translation="MPKVTVDGVEIDVPQGATVLQACELAGKEIPRFCYHERLSIAGN
                     CRMCLVEVAPGPPKPQASCALPAADGQAIRTDSEMVKKAREGVMEFLLINHPLDCPIC
                     DQGGECDLQDQAMAYGRSFSRFKENKRAVDDKYMGPVIKTSMNRCIQCTRCVRLAEEV
                     AGVPEIGMLYRGEDSQITTYLERTVTSELAGNLADVCPVGALLQKPQLFEYRPWELRR
                     VPAIDVMDAVGSNIRLDVRQRQVMRILPRVNDDVNEEWISDKTRHHADALVRNRLDRP
                     WVRENGKLREADWNEALGIFADRLKAAGSKVAAIAGDLLDAETMYAAKALLKAQGSEL
                     LEGRQTGLDYDVSNLGAVAFNSTIAGIEEADAVLLIGSNPRWEAPLVATRLRKVAKKG
                     GKIFAIGPETDLAMRVEWLGDDLKLLGKLPKAVKDAFSSAERPAVILGPGALAAGAMG
                     AALALVEPLGLVKRGWNGFNVLHTSASRMAGLILGFAQKRGLSDIEAAKPGVVLLLGA
                     DEMPADRLGEAFKVYIGHHGDNGARHADLVLPGAAYSEKHGTYVNMEGRVQRGEKAVF
                     PPGEAREDWTIFRAVSELLGNPLAFDSYAELRAAMIAEHPQLATEGLLKLKWAPPRLD
                     SKATGPVTYPIGDFYLTNAITRASPTMHLCSEEILHGHFETLEAAE"
     gene            complement(5423..5548)
                     /locus_tag="VHN55_06330"
     CDS             complement(5423..5548)
                     /locus_tag="VHN55_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803585.1"
                     /translation="MKLLLAIAIVAILAVVVLAMQRSGPRVTKIDREVDREDRDA"
     gene            complement(5719..6441)
                     /locus_tag="VHN55_06335"
     CDS             complement(5719..6441)
                     /locus_tag="VHN55_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803586.1"
                     /translation="MKSSLCTLLGAAILATGFPANAQVAPPNPDRGGPPPPPPSGEDI
                     GRRNDDFWARYDTQLRMKDVNSPESRAGPAAVARCVVSKAKGKAGTLVGGAFTDDPKY
                     GELMSALQNKYSRCVDTVAVGLSMDLVNAAVAEELLRVEPPAVPERATIADVAAAKAF
                     YVETKGLTIEGIGRCLAVYSPGLAYRVVQTPPASPEESAALAAVFAKTPECGRSAPPA
                     GIAPAYQRAAVATGLYHWTHRG"
     gene            complement(6534..7859)
                     /gene="nuoF"
                     /locus_tag="VHN55_06340"
     CDS             complement(6534..7859)
                     /gene="nuoF"
                     /locus_tag="VHN55_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007684860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEX2803587.1"
                     /translation="MGYTGPLADKDRIFTNVYGYQSPYLKASKQRGDWDETAKLMQIG
                     EDAIIEAIKTSGLRGRGGAGFPTGMKWGFMPKEPKPGKPNFLVINADESEPGSCKDRE
                     IIRHDPHKLIEGALIASFAMRARACYIYIRGEFIREAEVLEKAVAEAYDAGLLGRNAA
                     GSGYDFDLFVHRGAGAYICGEETAMLNSLEGKKGWPRLKPPFPAGAGLYGCPTTVNNV
                     ESIAVVPTILRRGASWFASIGREKNEGTKLFQLSGHINTPCVVEESMSISFRELISRH
                     GGGIRGGRNADDFSNLLAVIPGGSSVPLVPAEEILDAPMDFDGLKALGSGLGTAAVIV
                     MDKSTDIVRAISRISYFYKHESCGQCTPCREGTGWMWRVMERLREGDASVETIDKLLD
                     VTKQVEGHTICALGDAAAWPIQGLIRHFRPELERRIAERRSREMLEAAE"
     gene            complement(7859..8011)
                     /locus_tag="VHN55_06345"
     CDS             complement(7859..8011)
                     /locus_tag="VHN55_06345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803588.1"
                     /translation="MTNVLKIIVAIVVIVIAWKIIKGILGLLVGLAIAGLIVYGGMKL
                     LEGPRS"
     gene            complement(8008..8697)
                     /gene="nuoE"
                     /locus_tag="VHN55_06350"
     CDS             complement(8008..8697)
                     /gene="nuoE"
                     /locus_tag="VHN55_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014076635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEX2803589.1"
                     /translation="MAGNAPVEDPEVIERWRGFAWTAENAKTAKAIIAKYPAGRQHSA
                     VLPLLDLAQRQVGAETNTQGWLPIPVMEFVAREIDMPYVRLLEVATFYTMFNLQPVGR
                     FHVQVCGTTPCMLRGSDDVLDACYKRGLKKGRTTEDGLFTLSEVECLGACANAPMVQI
                     NDDNYEDLTADSMAAILDALAAGETPKPGPQIERQTSAPETGPTSLKKMAERNYDYRS
                     QWTDTAGEGAS"
     gene            complement(8697..>9498)
                     /locus_tag="VHN55_06355"
     CDS             complement(8697..>9498)
                     /locus_tag="VHN55_06355"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX2803590.1"
                     /translation="TPNLWLFEVREDTLQFYERASGARMHANYFRVGGVREDLPEKLF
                     ADIGDWLDNRLKLFEDAISLVADNRIFKQRNVDIGVVHKDDAIAWGFSGPMIRASGVP
                     WDLRKSQPYEVYDGMDFDIPVGTNGDCYDRFMVRVEEVRQSARIMRQCLKEMPPGPFA
                     TDDRKVFPPPRALMKTSMEALIHHFKLYTEGYHVPAGEVYVATESPKGEFGVYLVSDG
                     TNRPYRCKIRPTAFSHLQAMDFMMKGHMLADVTAVLSAIDVVFGECDR"
BASE COUNT         1774 a         3026 c         3045 g         1653 t
ORIGIN      
        1 ataagcgact acgcgcttga tgtcgttctg cgccgtgccg atcgtcgcgg cgacgaagca
       61 ggtcgcggcg ccaatataag tgacgacgtg cagcgcgatg ggcgcgactt cgaacatcgg
      121 cgacaggcgg cagaccatga acacgccggc ggtgaccatg gtcgctgcat ggatgagggc
      181 gctgaccgga gttgggccct ccatcgcgtc gggaagccaa gtgtggaggc cgagctgggc
      241 cgacttgccc atcgctccga tgaacaggag aatgcagagc aaggacatcg tatcgacgcg
      301 catgccggcg aacccgatgc tcgaaccagc catggcggga gccgcggcga ggatggccgg
      361 gatcgaaacg gtgccgaaca ccaggaacgt cccgaaaatg ccgaggctga aaccgaagtc
      421 gccgacgcgg ttgacgacaa acgccttgag agccgccgca ttggccgacg gcttgtggta
      481 ccagaaaccg ataagcaggt aggaagcgag gcccacccct tcccagccga agaacatctg
      541 cacgagactg tcggccgtaa ccagcatcag catcgcgaag ctgaacagcg agaggtaggc
      601 gaagaagcgg gtctgacccg ggtcttcctc catatagccc cagctgtaga ggtggacgag
      661 cgaggagacg gtggtcacca cgaccagcat caccgcggtc agggcgtcga cgcgaagcgc
      721 ccattcgact tgcaggtcgc ccgaccggat ccactcgagc accggcacca cctgggcctc
      781 ggcgccaccg gcgatgtagg agaagaagat gggccagctc agcgccgcgc cgacgaatag
      841 cgcgccggtc gtcagcacct tggctgcggg cttgccgatc cagggaccgc cgagtcccgc
      901 gataatcgcg gcgatcagcg gcaggaagac gatcagctcg agcgacaggg ccatgctcat
      961 cagccgcgca tcctgtccgc tgcgtcaacc gcgatggaac ccttgcggcg gaagaagata
     1021 acgaggatcg cgaggccgat cgcggcctcg gcggcggcga cggtcagcac gaacatcgcc
     1081 atcacctgcc cggacaaatc gccgaggaag gcgctgaacg cgaccaggtt gatgctgaca
     1141 gcgagcagga tcagctcgat cgccatcagc atcaggatca cgttgcggcg attgatgaag
     1201 attccgagca ccccgagcac gaacaggatc gcggccacgg tgaggtaatg gcccaggccg
     1261 atcacagctt caccccctca cccacttcgg gctgggtcag cttgaccgcg tcctccggac
     1321 ggcgccggac ctgtttcgaa atgtcctgcg gccgggcgtc ggggcggctt cggtgagtga
     1381 ggacgatggc gccgatcatc gccaccagca gcacgagccc cgcgatctcg aacgggaaca
     1441 ggtagcggct gtaaagaagc tcccccaggg caacgatatt cggcacccgc gcctcgggcg
     1501 gagcagcgcc gctgatcccc gcgcccgcct tccaggcgct gacggcgagc accatttcgg
     1561 caagtagcac cagcgcgacg atgatgccga acggaaggtt cctggtgaag ccggagcgaa
     1621 gcgtcgcgaa gtcgatgttg agcatcatga cgacgaacag gaacagcacc atgaccgcgc
     1681 cgacgtagac gatgaccagg agcagcgcga tgaactcggc tcccgcgagg agcatgagcc
     1741 ccgcagcgtt gaagaaggcg aggatcagcc agagcacgct gtgaaccggg ttgcgcgcga
     1801 aaatcaccgc caccgccgaa gcgatggtga gcgtcgcgaa caggtaaaag gcgatgagtg
     1861 cgatcaagtc ggaaaaccct gttgcggcgc ggttatcggt acggtgcgtc ggcggcaagg
     1921 ttggcggcaa tcgcctgttc ccacctgtcg ccgttggcaa gcaatttggc cttgtcgtag
     1981 agcaattcct cgcgcgtttc ggtcgcgaat tcgaggtttg gcccttcgac gatggcatcc
     2041 accgggcacg cctcctggca cagcccgcaa tagatgcatt tgaccatgtc gatgtcgtag
     2101 cgggtggtcc ggcggctgcc gtcttcgcgc ggctcggctt cgatggtgat tgcgagcgcc
     2161 gggcagatcg cctcgcacag cttgcaggcg atgcagcgct cctcgccatt ggggtagcgc
     2221 ctcagcgcat gctcgccgcg gaagcgcggg ctctggggcg ccttctcgta cgggtagttg
     2281 atcgtcgcct tgggcttgaa gaaatatttc agcgtcagcc agtgggcgcc gatgaactcc
     2341 cacagggcga atgacttgat ccaatgcgcg atcatgacgc gcctccgtac ctggtaagca
     2401 tgagccagcc ggacacgagg acgacgaaaa tgatgctgag cggcaggaag atcttccagc
     2461 cgagccgcat cagttggtcg tagcggtagc gcggcaccgt ggccttcacc cagctgaaca
     2521 cgaagaagaa gaacaggatc ttggcaaaca accagagaat tccgggaatc cagtagagcg
     2581 gcgcccagtc gatcggaggg aggaagccgc cccagaacag gatggcgttg agtgcgcaca
     2641 tcaggaggac gttgccgtac tcgccgagcc agaagagcgc gaagctcatc gacgaatatt
     2701 cggtctggaa gccggccacg agctcgctct cggcctcgac gagatcgaac ggcgtgcgaa
     2761 atgtctccgc catcgagctg atcaggaaaa ccaccgccat cgggaaaaga agcgggttga
     2821 aaccaaaacc gttgagcagc ccgagcacat ggccctgctg catcatcacg atctcggtta
     2881 ggttgaagct gttcgcgtag aggacgacgc tgatcaagac gaagccgata gagacttcgt
     2941 agctcaccat ctgcgcggca gcgcgaagcg ccgaaaagaa gggatatttc gagttggacg
     3001 cccagccggc gacgatcacg ccgtaaactc cgagagatga ggccgcgagc acgtagagga
     3061 gcccgacgtt gatgtcggcg aggacgacgc cgagatcgaa cgggatcact gcccagacga
     3121 tcaaggcgac cgtgaagctg acgatcgggg cgatcatgaa cagccccttg ttcgcagccg
     3181 acgggacgat ggtctccttc aggaacacct ttaggccgtc ggcaaagctc tgcagcagcc
     3241 cccacggtcc aactacgttc gggccacggc gcaaggccat cgccgcccag attttgcggt
     3301 cggcatagat gatcattgcc accgccagca tcagcggaag ggcgatgacg aggatgccga
     3361 cgatcgtggc aaggaaccac gaccattcgt aggtgaacca attctggaag taggctgtca
     3421 ctccgccgcc tccagggttt cgaagtgccc gtgaaggatt tcctccgaac acaggtgcat
     3481 ggtcgggctg gcgcgggtga tcgcgttggt gaggtagaaa tcgcctatcg gataggtcac
     3541 cggtcccgtc gccttggaat cgagcctggg cggcgcccat tttagcttga gcaggccctc
     3601 ggtggcgagt tgcggatgct cggcaatcat cgctgctcgg agctcggcgt agctgtcgaa
     3661 ggcaagtggg ttgccgagaa gctccgacac cgcccggaag atcgtccagt cttcgcgcgc
     3721 ttcgcccggc gggaacacgg ctttctcacc gcgctgaacc cggccttcca tgttgacgta
     3781 ggtgccgtgc ttttcgctgt aggccgcgcc gggaagcacc aggtcggcgt ggcgggcgcc
     3841 attgtcgccg tggtggccga tatagacctt gaatgcctcg ccgaggcggt cggcgggcat
     3901 ctcgtcggcg ccaagcagca gcacgacgcc gggcttcgcc gcctcgatgt ccgacaaccc
     3961 gcgcttttgc gcgaatccca ggatcaggcc cgccatccgt gaggccgagg tatgaagaac
     4021 gttgaagccg ttccagccgc gcttcaccaa cccgagcggt tcgaccagcg ccagtgccgc
     4081 gcccatggct cctgccgcga gcgcgccggg cccaagaatc acggccggac gctcggcact
     4141 ggaaaaggcg tccttgactg cctttggcag cttcccaagc agcttcagat cgtcgccgag
     4201 ccattcgacc cgcatcgcca ggtcggtttc ggggccgatc gcgaaaatct tgccgccctt
     4261 cttcgccacc ttgcggagcc gagtggccac aagcggcgct tcccagcgcg gattggagcc
     4321 gatcagaagg actgcatccg cctcctcgat gccggcgatg gttgagttga acgcgactgc
     4381 gccgagattc gacacgtcat agtccagccc ggtctgccgc ccttccagaa gctcagaccc
     4441 ctgcgccttc agcagcgcct tggctgcata catggtttcc gcgtccagca ggtcgccggc
     4501 gatcgcagcg accttgcttc ccgccgcttt cagcctgtcg gcgaaaatcc caagcgcctc
     4561 gttccagtcg gcctcgcgaa gcttgccgtt ttcgcgcacc cacggccggt cgagccggtt
     4621 gcggacgagc gcatcggcgt ggtggcgtgt cttgtcggaa atccactcct cgttgacgtc
     4681 gtcgttgacg cgcggaagga tccgcatgac ctgccgctgg cgcacgtcga ggcggatatt
     4741 cgatccgacc gcgtccatca cgtcgatcgc cggaacccgg cgaagctccc acggccgata
     4801 ttcgaacaat tgcggcttct ggagcagcgc accgaccggg cagacgtcgg cgagattgcc
     4861 ggcaagctcg ctggtcaccg tccgctcgag ataggtggtg atctgcgaat cctcgccgcg
     4921 gtagagcatc ccgatctcgg gcactccggc gacttcctcg gcaagacgga cacagcgcgt
     4981 gcactggatg caccggttca tcgacgtctt gatgaccggg cccatatatt tgtcgtcgac
     5041 cgcgcgcttg ttctccttga agcgcgagaa gctgcggccg taggccatcg cctggtcctg
     5101 aaggtcgcat tcgccgccct ggtcgcagat cgggcagtcg agcgggtgat tgatgagcag
     5161 gaactccatc accccctctc gcgccttctt caccatctcg ctgtcggtgc ggatggcctg
     5221 gccgtcggca gcgggaagag cgcagctcgc ttgcggcttg ggcgggccgg gagcgacctc
     5281 caccaggcac atgcggcaat tgccggcgat cgagaggcgt tcgtggtagc agaagcgcgg
     5341 gatctccttg cccgccagtt cgcaggcctg aagcacggtc gcgccctgcg gaacgtcgat
     5401 ttcgacgccg tcgaccgtca ccttaggcat cgcggtcctc ccgatcgact tcgcggtcga
     5461 tcttcgtcac gcgcggcccc gaacgctgca tcgccaggac gacgacggcg aggatcgcga
     5521 cgatggcaat ggctaggagc agcttcactt cgtggacctc aacctgtggc gagcacaaac
     5581 gcgcacggcg ctggcagcct cctaacttcc gaggcggcta acgcaagcgc tcaccgggca
     5641 cagcggggca cgaaccacgg ttttcagggt ccagagaggt gaaaatccgc cgtacggaga
     5701 gtaattgccc cgccgaatct aaccgcggtg ggtccagtga tagaggccgg ttgcaaccgc
     5761 ggcgcgctga taggccggcg caatccccgc cggaggcgcc gaacgcccgc actccggcgt
     5821 ttttgcgaaa acagccgcaa gcgcagccga ttcctccggt gaggcggggg gcgtctgaac
     5881 cacccgatag gcaaggcctg gggagtagac cgcaaggcaa cgcccaatac cttctatcgt
     5941 gagccccttg gtctcaacgt aaaaggcctt ggcggccgcc acatccgcga tcgttgcgcg
     6001 ttccgggacg gcgggcggct cgacgcggag caattcttcc gcaactgcgg cattgaccag
     6061 atccatcgat agcccgaccg ccacggtatc gacgcagcgg gaatatttgt tctgaagcgc
     6121 gctcatcagc tcgccgtatt tggggtcgtc ggtgaatgcg ccgccgacga gcgtgccggc
     6181 cttccccttc gcttttgaca cgacgcatcg agccactgcg gccgggccgg cgcgcgactc
     6241 cggcgagttc acgtccttca tgcgaagctg cgtgtcgtac ctggcccaga aatcgtcgtt
     6301 gcggcgaccg atgtcctcgc cgctcggcgg cggcggcggc ggcccacccc ggtcgggatt
     6361 cggcggcgcc acctgtgcat ttgccggaaa tccagttgcc agaatcgctg ctccaagaag
     6421 cgtacacaga gaactcttca tcgtcgtccc ctcccaatcg acatgagtcg gatgcggcag
     6481 cgttgcgcct tacagctgta ttggcaagcc ccggatcacg ggggccggac tgtctattcc
     6541 gctgcttcga gcatctcgcg gctacggcgc tcggcgatcc ggcgctccag ctccgggcgg
     6601 aagtggcgga tcagcccctg gatcggccaa gccgcggcgt cgcccagcgc gcaaatggtg
     6661 tggccctcca cctgcttggt gacgtcgaga agcttgtcga tcgtctcgac gctggcgtcc
     6721 ccttcgcgga ggcgctccat cacccgccac atccagccgg tgccctcgcg gcacggggtg
     6781 cactggccgc agctctcgtg cttgtagaaa tagctgatcc ggctgatcgc acggacgatg
     6841 tcggtcgact tgtccatgac gatgaccgcc gcggttccaa ggccggaccc cagcgccttg
     6901 aggccatcga agtccatcgg agcgtcgagg atttcctcgg ccggcaccag aggaaccgaa
     6961 gatccgccgg gaatgaccgc cagcaaattg ctgaaatcat cggcgttcct gccgccgcgg
     7021 attccgccgc cgtggcggct gatcagttcg cggaagctga tgctcatgct ctcttcgacc
     7081 acgcagggcg tattgatatg gcccgacagc tggaacagct tggtgccttc gttcttctct
     7141 cgcccgatgc ttgcgaacca cgacgcgcca cggcgaagga tggtcggcac gacggcgatc
     7201 gattcgacgt tgttgacggt cgtcgggcag ccgtagaggc ccgcaccggc cgggaacggc
     7261 ggcttgagcc ttggccagcc cttcttgccc tccaggctgt tgagcatcgc ggtttcttcg
     7321 ccgcagatgt aggcgccggc cccgcggtgg acgaataggt cgaagtcgta gcccgagcca
     7381 gccgcgttcc tgccgagaag gccggcgtca taggcttcgg caacggcctt ctcgagaacc
     7441 tctgcctcgc ggatgaactc gccgcggatg tagatgtagc aggctcgagc gcgcatcgcg
     7501 aagctcgcga tcagcgcccc ttcgatcagc ttgtgcggat catggcggat aatctcgcgg
     7561 tccttgcacg atcccggctc ggattcgtcg gcgttgatga ccaggaagtt cggtttcccg
     7621 ggcttgggct ccttgggcat gaagccccac ttcatccccg tgggaaagcc ggcgcctcct
     7681 cggccgcgaa ggccagaggt cttgatcgct tcgatgatcg catcctcgcc gatctgcatc
     7741 agcttggcgg tctcgtccca gtcgccgcgc tgcttggacg ccttcaggta aggcgactgg
     7801 tagccgtaga cgttggtgaa gatgcggtcc ttgtccgcca gcggcccggt atagcccatc
     7861 agctgcgcgg tccttccagc agcttcattc caccgtagac gatgagcccg gcgatcgcga
     7921 ggccgacgag gaggcccagg atacccttga tgatcttcca cgcgatcacg atcacgacga
     7981 tggcgacaat gattttcagg acatttgtca tgatgcgccc tctcccgccg tgtcggtcca
     8041 ctgcgagcga tagtcgtaat tgcgctcggc catcttcttg aggctggtcg ggccggtctc
     8101 gggggcgctg gtctgccgct cgatctgtgg gccgggcttc ggggtctcgc cagccgccag
     8161 cgcgtcgagg atcgcggcca tgctgtctgc ggtcaaatcc tcgtaattgt cgtcgttgat
     8221 ctggaccatc ggcgcattgg cgcaagcgcc gaggcattcg acctcgctaa gggtgaacag
     8281 cccgtcctcg gtcgtccggc cctttttaag cccgcgcttg tagcaggcgt cgagcacgtc
     8341 gtcggagccg cgaagcatgc acggcgtcgt cccgcacact tgcacgtgga agcggcccac
     8401 cggctgcagg ttgaacatcg tgtagaaggt cgcgacttcg agcagccgaa cgtagggcat
     8461 gtcgatctcg cgggctacga actccatcac cgggatcgga agccaccctt gtgtattcgt
     8521 ctctgccccg acctgccgct gggcaaggtc gagaagcggg agcaccgccg aatgctgccg
     8581 gcccgcagga tatttggcga taatcgcctt ggccgtcttt gcgttctccg ccgtccaggc
     8641 gaagccgcgc cagcgctcga tcacctccgg atcctcaacg ggtgcgttgc cggccattag
     8701 cgatcgcact ccccgaagac gacgtcgatg gcgctgagca ccgccgtcac gtcggcaagc
     8761 atgtggccct tcatcatgaa gtccatcgcc tgcaggtggc tgaacgcggt cgggcggatc
     8821 ttgcaccggt atggccggtt ggtgccgtcg gagacgagat acacgccgaa ctcgcccttg
     8881 gggctttcgg tggcgacata aacctcgccg gcgggcacgt gatagccctc ggtgtagagc
     8941 ttgaagtgat ggatcagcgc ttccatcgaa gtcttcatca gggcgcgcgg cggcgggaaa
     9001 accttgcggt cgtcggtcgc gaacgggccc ggcggcattt ccttcagaca ctggcgcatg
     9061 atcctggccg actgccgcac ttcctcgacg cggaccatga agcggtcgta gcagtcgccg
     9121 ttggtgccga cgggaatgtc gaagtccatt ccgtcataga cttcgtacgg ctgcgacttg
     9181 cgcaggtccc atgggacgcc cgacgcgcgg atcatcggtc ctgagaaacc ccaggcaatg
     9241 gcgtcatcct tgtggaccac gccgatatcg acgttgcgct gcttgaagat gcggttgtcg
     9301 gcaacgagac tgatcgcgtc ctcgaacagc ttcaggcggt tgtcgagcca gtcgccgatg
     9361 tcggcgaaca gcttctccgg caaatcctcg cggactccgc cgacgcggaa ataattggcg
     9421 tgcatcctgg cacccgacgc gcgctcgtag aattgcagcg tgtcctcgcg gacctcgaac
     9481 agccacaggt tcggggtc
//
LOCUS       DATAKH010000153        10252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10813,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000153 DATAKH010000000
VERSION     DATAKH010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 10252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10252
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10813"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..533)
                     /locus_tag="VHN55_06360"
     CDS             complement(<1..533)
                     /locus_tag="VHN55_06360"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX2803591.1"
                     /translation="MYDSFVRDRLPPPELLPEFRFDLPEVQYPERLNCAAELLRGGDP
                     DSLAVINEHGRWTYADLDDFSGRLARLLVDEEGLVPGNRVLLRGPNTMTMFAAWLGVL
                     KAGGVVVATMPLLRPGEIATVIERAQISHSIVDSRFIGDFRQGAEHTHFVKHIVKYDG
                     DYGKGELETRCASLDPLP"
     gene            complement(535..927)
                     /locus_tag="VHN55_06365"
     CDS             complement(535..927)
                     /locus_tag="VHN55_06365"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012429996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX2803592.1"
                     /translation="MKVLQPAGWPRPKGYSNGISARGRMIFTAGIVGWDENEMFPDHR
                     LHAQFAQALRNTLAILAEDGAGPQHIVRMTCYIKSREDYLRERDEIGAAWREIVGSNY
                     PAMAMIEVSGFVEAAAAIEIETTAVVPD"
     gene            complement(924..2072)
                     /locus_tag="VHN55_06370"
     CDS             complement(924..2072)
                     /locus_tag="VHN55_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2803593.1"
                     /translation="MADRGFLSWPFFEERHRDLAAKLEAWCDKHIHDAEPSDADAAVR
                     ALVKEYGRAGFLKLAVSDGDRRPDVRSLALCREILARHHGLADFAFAMQGLGSGAISL
                     FGTVEQKREWLPKVAGGEAIAAFAMTEPECGSDAANIQTSAMKDGDEWVLVGEKTYIS
                     NGGIADFYVTFARTGEGEGARGLSVFIVPADSVEVAQRIEVIAPHPLARLKYDNVRLP
                     ADALIGSPGDGFRIAMETLNLFRVTVGAAALGFARRALDEALRFATDRRLGSGTLADN
                     AVTQERLADMALGIDASALLIYRAAWRQDVGGTDNRRAAAMAKLHATETAQQVIDSAV
                     QMHGGAGVTKGVKVEELYRDIRALRIYEGASEVQRQIIARDLLKGAGR"
     gene            complement(2072..2881)
                     /locus_tag="VHN55_06375"
     CDS             complement(2072..2881)
                     /locus_tag="VHN55_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HEX2803594.1"
                     /translation="MSFDPATFAPTHFLWDFADGVATITLNRPERKNPLTFESYDELR
                     YTFYALVNAREVKAVVITGSGGNFCSGGDVHEIIGPLTKMDRDGLLKFTRMTGDLVRA
                     MRACPQPIVAAVEGVCAGAGAILAMASDLRLASRDAKAAFLFTRVGLSGADMGACAIL
                     PRIVGHGRAADLLFTGRSMGAEEGFAWGFWNRLSDTVLADAQAIAQDLANGPAYAHSV
                     TKRQLDAEWDVSINRALEMEADAQADCMETQDFRRAYEAFAAKRKPVFQGD"
     gene            complement(2878..3642)
                     /locus_tag="VHN55_06380"
     CDS             complement(2878..3642)
                     /locus_tag="VHN55_06380"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2803595.1"
                     /translation="MANGLEGRHAVITGGGTGIGAAAAAELANAGAKLSLLGRRMGPI
                     QAAAIGTGGTAFQCDVTNPEAIDSAFAKAREANGPIELLIVNAGIAESAPFHKMTRES
                     WDRIIATNLTAAFDCARAAIGDLLKSENGRLVFVASVASIRGVPYAAHYAASKHGLLG
                     LTRSLAAEYAKTNLTVNAVCPGYVDTPMTDQSVARVSEITGRSEEDSRGVITNMNASG
                     RLVDPDAIARMILTICLPLSRDINGAAITIDGGTSA"
     gene            3687..4376
                     /locus_tag="VHN55_06385"
     CDS             3687..4376
                     /locus_tag="VHN55_06385"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEX2803596.1"
                     /translation="MKLTILETGRPPGDLAAQFGTYPEMFDRMLGSQFDIESFDVRNG
                     ELPGNTGTGDAFLITGSPAGVYDPLPWIPDLLEFIRSARDSKMVGICFGHQAMAQALG
                     GHVEKSDKGWGTGLHSYDVIHPEPWIRTGATLAIPASHQDQVIVQPPNTDVVARSHFT
                     PYAALAWTDRPAISFQFHPEFSPEFAKALIEARRPDLPNPDLAIQSLDAPNDSARVGT
                     WIRRFLLENDQ"
     gene            4373..5485
                     /locus_tag="VHN55_06390"
     CDS             4373..5485
                     /locus_tag="VHN55_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007612981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEX2803597.1"
                     /translation="MKTRAAIAFEAKRPLEIVEVDLDGPKQGEVLVELKATGICHTDA
                     YTLDGLDSEGLFPSILGHEGAGIVREVGPGVTSVKPGDHVIPLYTPECRQCKACLSGK
                     TNLCTAIRATQGKGVMPDGTSRFSYKGETIFHYMGCSTFSNFTVLPEIAVAKIREDAP
                     FQTSCYIGCGVTTGVGAVVNTAKVEPGSNVVVFGLGGIGLNVIQGAKLVGANRIVGVD
                     INPAREEWGRKFGMTDFLNTKGMTREDIVAKIVEITDGGADYTFDATGNTEVMRTALE
                     CCHRGWGTSIIIGVAEAGKEIATRPFQLVTGRNWRGTAFGGAKGRTDVPRIVDWYMDG
                     KIAIDPMITHVLKLDEINKGFELMHAGESIRSVVVY"
     gene            5501..5884
                     /locus_tag="VHN55_06395"
     CDS             5501..5884
                     /locus_tag="VHN55_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010338956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2803598.1"
                     /translation="MFSHIMLGCSDRERSRKFYDATLGALGIRPHRDFGKSDWWMTRQ
                     GSLGIGPPIDGQPCSHGNGSTVGFKAQSPEQVDAWHAAGVANGGTAIEEPPGIRDGGF
                     GKMYLAYLRDPDGNKLCGFYSYPRE"
     gene            5887..6729
                     /gene="fghA"
                     /locus_tag="VHN55_06400"
     CDS             5887..6729
                     /gene="fghA"
                     /locus_tag="VHN55_06400"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019051712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046292 - formaldehyde metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEX2803599.1"
                     /translation="MKIVSENRSHGGRQLVVSHESGATSTGMTFSIFLPPQAETGPTL
                     PVVWFLSGLTCSPMNVTEKGEYRAACAELGLAFVAPDTSPRGEHVPTDPAGGWDFGLG
                     AGFYVDATEQPFARNYRMWTYVTEELPALVASEFPVDMDRQAITGHSMGGHGALTIAL
                     RRPIRYRSVSAFSPIVAPSQVAWGQKALGGYLGEDRNAWRKHDAVALIEDGARVPEML
                     VDVGDEDPFLDQQLRPELLEQACAYAGIGLTLRRQPAYDHSYYFVSTFMAEHLRWHAE
                     RLGR"
     gene            6726..7985
                     /locus_tag="VHN55_06405"
     CDS             6726..7985
                     /locus_tag="VHN55_06405"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4010 domain-containing protein"
                     /protein_id="HEX2803600.1"
                     /translation="MIESLEPWAQEAIRVWAGLAVGALVGLERGFKLQSQREGHRVAG
                     FRTFTLMGLTAGISGLLAGSQPFVSAAVVAAMLGYLAIAYAPKLKAKGDSTSPIAAAA
                     TIAIAFLAGIGEVPLALASVAIVVFILALKEDLHNLVERLDERDLKALARFGVIALAV
                     LPFLPDESFGPYGAWNASKLWWVVILVTGFSFAGYVANRLFGSTHGTIATAVIGGAYS
                     STAVTQSLAQRLGSKEGGGAEPAGIALASAVMYLRVIVLVAIIATRVLLDFLIVVAPA
                     LVVGGIAGWWLYRSAPHQKGPAPPGNPIALLPALTFLLFLAAAAVVARWAEASFGQEG
                     IAVLLLIMGSLDVDAAIVTAGGLPENAISSELAAIALGGTILANMAVKLGVTLAYARA
                     KGVSAAIALAASMVALAISIGVALLSL"
     gene            complement(8045..8120)
                     /locus_tag="VHN55_06410"
     tRNA            complement(8045..8120)
                     /locus_tag="VHN55_06410"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8084..8086),aa:Glu,seq:ttc)
     gene            complement(8161..9912)
                     /gene="recJ"
                     /locus_tag="VHN55_06415"
     CDS             complement(8161..9912)
                     /gene="recJ"
                     /locus_tag="VHN55_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006959183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEX2803601.1"
                     /translation="MTFALGVERSISGQPWKWRGAREPAAGMDSLVDELLLARGVPRD
                     DLGRNRDPRIRDFLPDPSAFRDMDKGAKRLADAVERGETIALFGDYDVDGATSAALLT
                     LLLRQLGSDPMVYIPDRLMEGYGPSGAALVELKNRGASLAVTVDCGAQAFEALEEAKS
                     AGLDVIVVDHHQCATLLPVAFAMINPNRLDEGEIGMAHGHVAAVGMAFLLGVALLREL
                     RGRGFLDGREEPRILDLLDLVALGTVADVAKLQGLNRAFVAQGLKVMAARKNLGLVAL
                     AEAARLVKPPSCRDLGFALGPRINAGGRVGKSDLGVRLLTCTDPEEAREFAAELDRLN
                     EERRAIEMTVCEQAEEQAAKLNGAAVITVMSSGWHQGVIGIVAGRLKERFGRPAIVIA
                     ECEDGTGKGSGRSISGVDLGAAVLAAKDSGLLIAGGGHAMAAGLTLPKGGLEPFQDFI
                     NERLAADVERSRDGRALLVDALLAPGGIVGGLCDSLDAGGPYGAGWPSPKIVAGPARL
                     LRTGIVGNGHVRGLACGDDGKSFKWIAFRQAETELGQALLSSPGDRRWWLAGSVKRDE
                     WNGGNAAEMHLDDAALA"
     gene            complement(9909..>10252)
                     /locus_tag="VHN55_06420"
     CDS             complement(9909..>10252)
                     /locus_tag="VHN55_06420"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEX2803602.1"
                     /translation="VDMVFVPIAGAIGIVVILGAVALRWLAWRRTGFSLDGNRILIRS
                     GWWRRRILILPIRRIQSIDLSQSFIGRWFGIAGITFGVAGGTGLSIHRIPALSEEAAR
                     NLRGQLLEHIE"
BASE COUNT         1716 a         3442 c         3315 g         1779 t
ORIGIN      
        1 ggcagcgggt cgagcgaggc acagcgcgtc tccagttcgc ccttcccgta atcgccgtcg
       61 tacttgacga tgtgtttgac aaagtgcgtg tgctccgcgc cctggcggaa gtcgccgatg
      121 aagcggctgt caacgatcga gtggctgatc tgcgcgcgct cgatcaccgt cgcgatctcg
      181 ccggggcgga gcaaaggcat ggtcgcgacg accactccgc cggccttcaa aacgccgagc
      241 caggcggcga acatcgtcat cgtgttgggc ccgcgcagca gcacgcgatt accggggacc
      301 agtccctcct catcgaccag cagccgcgcg agccgaccgc tgaaatcgtc gaggtcagcg
      361 taggtccagc ggccgtgttc attgatgacc gcgagtgagt ccggatcgcc gcccctcagc
      421 aactccgccg cgcaattcag ccgttccgga tattgcactt ccggcaggtc gaagcggaac
      481 tccggaagca gctccggtgg cggcaggcgg tcgcggacga aactgtcgta catcttagtc
      541 cggcaccacc gcagtcgttt cgatctcgat cgctgcagcc gcttcgacga agccgctgac
      601 ctcgatcatc gccattgccg gataattgct gccgacgatc tcgcgccatg cggcgccgat
      661 ctcgtcgcgc tcccgaagat aatcttcgcg gcttttgatg tagcaggtca tcctgacaat
      721 atgctgcggg cctgcgccgt cttcggccag gatcgccagg gtgttgcgga gcgcctgggc
      781 aaattgggcg tgaaggcgat gatcggggaa catctcgttc tcgtcccagc cgacgatccc
      841 ggcggtgaag atcatccggc ccctggcgct gatcccgttc gaatagcctt tcggccgcgg
      901 ccacccggcc ggttggagaa ctttcatctg cccgccccct tcagcaagtc gcgcgcgatg
      961 atctgccgtt gcacctcgct cgcgccttcg tagattcgaa gcgcgcggat gtcgcgatag
     1021 agctcctcga ccttcacgcc tttcgtgact cccgccccgc cgtgcatctg caccgccgag
     1081 tcgatgacct gctgcgccgt ctcggtcgcg tggagcttgg ccattgcggc ggcgcggcgg
     1141 ttgtcggttc cgccgacatc ctgccgccag gcggcgcgat agatcagcag cgccgacgca
     1201 tcgattccca gcgccatgtc ggcaagcctc tcctgggtca ccgcgttgtc ggcgagcgtg
     1261 ccgctgccga gccggcgatc tgtcgcgaag cgaagcgcct cgtcgagcgc ccgccgcgcg
     1321 aagccgagcg ccgccgcgcc gaccgtcact cggaacaggt tcagcgtctc catcgcgatc
     1381 cggaagccgt cgccaggcga gccgatcagc gcgtcggcgg ggaggcgcac attgtcatac
     1441 ttgagccgcg cgagcgggtg cggcgcgatc acttcgatgc gctgcgcgac ctcaactgag
     1501 tcggctggca cgatgaaaac tgaaagcccg cgcgctcctt cgccttcgcc ggtgcgggcg
     1561 aaggtgacgt agaagtccgc aatcccgccg ttcgagatgt aggtcttctc gccgacgagc
     1621 acccattcgt ccccgtcctt cattgccgac gtctggatgt tggccgcgtc cgatccgcat
     1681 tcgggctcgg tcatggcgaa agcggcgatg gcttcgccgc cggcgacctt gggcagccat
     1741 tcgcgctttt gctcgacggt gccgaacagg ctgatcgcgc ccgatccaag cccctgcatc
     1801 gcaaaggcga aatcggcgag gccatggtgc cgggcgagga tttcgcggca caaggcgagg
     1861 ctgcgcacgt cggggcgacg atcgccgtcg gagacggcaa gcttcaggaa gcccgcgcgg
     1921 ccatattcct tcaccagcgc gcgaaccgcg gcatcggcat ccgacggttc cgcatcgtga
     1981 atgtgcttgt cgcaccacgc ttccagcttt gccgccagat cgcggtgtcg ttcctcaaaa
     2041 aaaggccagg agagaaagcc gcggtccgcc atcagtcgcc ctggaacacc ggtttccgct
     2101 tcgcagcgaa ggcctcgtag gcgcggcgaa aatcttgggt ctccatgcaa tccgcctggg
     2161 cgtcggcctc catctccagt gcacgattga tcgagacgtc ccactcggcg tcgagctgcc
     2221 gcttggtcac cgaatgggca taggccgggc cgttcgcaag atcttgagcg atcgcctggg
     2281 cgtcggcgag aacggtgtcg ctaagccggt tccagaagcc ccaggcaaag ccttcctcgg
     2341 cgcccatgct gcgcccggtg aacagcaggt cggcagcgcg gccgtggccg acgatccgcg
     2401 gcaggatcgc gcaggcgccc atgtccgcgc ccgacaggcc cacgcgggtg aacaggaatg
     2461 ccgctttcgc gtcgcgtgat gccagtctta gatcgctggc catcgcgagg atcgccccgg
     2521 cacccgcgca aacgccttcg acggcagcca cgatcggctg cgggcaggcg cgcattgccc
     2581 gcaccaggtc gccggtcatt cgggtgaact tcagcagccc gtcgcggtcc atcttcgtta
     2641 gcggcccgat gatctcgtga acatctccgc ccgagcagaa attcccgcct gagccagtga
     2701 tcaccaccgc cttcacctcg cgcgcattca cgagcgcgta gaatgtgtaa cgaagctcgt
     2761 catagctttc gaaagtcagc gggttcttgc gctccggccg gttgagcgtg atcgtcgcta
     2821 ccccgtcggc gaagtcccac aggaagtggg tcggagcgaa cgtcgcggga tcgaagctca
     2881 cgcgctggtg ccgccgtcga tggtgatcgc ggcgccgttg atgtcgcggc tgagcggcag
     2941 gcagatggtc agaatcatcc gcgcgatcgc gtccggatcg acgagcctgc cgctggcatt
     3001 catgttggtg atcacaccgc gcgaatcctc ttcgcttcgg ccggtgattt cggaaactcg
     3061 cgcaaccgac tggtcggtca tcggcgtgtc gacatagcca gggcagaccg cgttcaccgt
     3121 caggttcgtc ttcgcatatt ctgcggccag cgagcgcgtg aggccgagca gcccgtgctt
     3181 cgacgcggca taatgggcgg catagggaac gccccggatc gaggcgacgg acgcgacaaa
     3241 caccagccgc ccattctcgc tcttcagcag gtcgccgatg gcggcgcgag cgcaatcgaa
     3301 cgctgcggtg aggttggtcg cgatgatgcg gtcccagctc tcgcgggtca tcttgtggaa
     3361 gggcgcgctc tcggcgatcc cggcattcac gatcagcagc tcgatcgggc cgttcgcctc
     3421 gcgcgccttg gcgaaggcgg agtcgatcgc ctccgggttg gttacgtcgc actggaaggc
     3481 cgtgccgccc gtcccgatcg ccgcggcctg gatcggcccc attcggcgcc cgagaagcga
     3541 cagctttgcg cccgcattgg cgagctccgc ggcggcagcg gcgccgattc cggtcccgcc
     3601 gccggtgatc actgcgtgcc gaccttcgag cccgttcgcc atcgcttcaa cttggccgaa
     3661 cggccgcaag ctggcaaggc ggtgccatga agctgacaat cctggaaacc ggccgtccac
     3721 cgggagacct cgccgcccaa ttcggcacct atcccgagat gttcgatcga atgctcgggt
     3781 cgcaattcga catcgagagc tttgacgttc gaaacgggga actgcccgga aatacgggta
     3841 ccggcgatgc ctttctgatc accggctccc ccgccggggt gtacgacccg ctgccgtgga
     3901 tcccggacct tcttgagttc atccggtcgg ccagggacag caagatggtc ggcatctgct
     3961 tcggccacca ggcgatggcg caggcgctgg gcggacacgt cgagaagtcc gacaagggct
     4021 gggggaccgg ccttcacagc tacgacgtca tccaccccga gccgtggatc cgcaccggcg
     4081 ccacactcgc aattcccgct tcgcaccagg accaggtgat cgtccagccg cccaacaccg
     4141 acgtcgtcgc gcggtcgcat ttcacgcctt atgctgcgct ggcctggacc gatcgcccgg
     4201 cgatctcatt tcaattccat cccgaattct cgcccgagtt cgcaaaagcg ctgatcgagg
     4261 ctcgtcggcc tgacctaccc aaccccgatt tggccatcca atcgctcgac gcgccgaacg
     4321 acagtgcgcg ggtcggcacc tggattcggc gcttcctgct ggagaatgat caatgaagac
     4381 ccgcgccgca atcgccttcg aagcgaaacg gccgctcgag atcgtcgagg tcgatctcga
     4441 cggtccgaag cagggcgaag tcctcgtcga gctgaaggcg acgggcatct gccacaccga
     4501 cgcctacacg ctcgacggcc tcgattccga agggctgttc ccgtcgatcc tgggccatga
     4561 aggggccggt atcgtccgcg aagtcggacc cggcgtgacg agcgtgaagc cgggcgatca
     4621 tgtgatcccg ctgtacacac ccgaatgccg ccagtgtaag gcgtgcctgt ccggcaagac
     4681 caacctatgc accgcgatcc gggccaccca gggcaagggc gtcatgcccg acggcaccag
     4741 ccggttcagc tacaagggcg agacgatctt ccattacatg ggctgttcga ccttctcgaa
     4801 cttcaccgtg ctgccggaga tcgcggtcgc gaagatccgc gaggacgcgc cgtttcagac
     4861 cagctgttac atcggctgcg gagtgacgac gggcgtcggc gccgtggtaa acaccgcgaa
     4921 ggtggagcct ggctcgaacg tcgtcgtctt cgggctcggc gggatcggcc tcaacgtcat
     4981 ccagggcgcg aagctcgtcg gtgccaacag gatagtcggc gtcgatataa atcccgcgcg
     5041 cgaggaatgg ggccgcaagt tcgggatgac agacttcctc aataccaaag gcatgacccg
     5101 cgaggacatc gtcgcgaaga tcgtcgagat taccgacggc ggcgccgact atacgttcga
     5161 cgcgaccggc aacaccgaag tgatgcgcac ggcgctcgag tgctgccatc gcggctgggg
     5221 cacgagcatc atcatcgggg tcgccgaagc gggcaaggag atcgcgaccc gtccgttcca
     5281 gctcgtcacc ggccgcaact ggcgcgggac ggcgttcggg ggcgccaagg gccgcaccga
     5341 tgtgcccagg atcgtcgact ggtacatgga cggcaagatc gcgatcgacc cgatgatcac
     5401 gcacgtcctc aagctcgacg agatcaacaa gggattcgag ctgatgcacg cgggcgagag
     5461 cattcgctcg gtcgtcgtct actaaggggg taagaacacc atgttcagcc acatcatgct
     5521 tggttgcagc gaccgcgagc ggtcgcgcaa attctatgac gccacgctcg gcgcgctcgg
     5581 aatccgcccg catcgcgact tcggcaagtc ggattggtgg atgacccgcc aaggctcgct
     5641 cgggatcggc ccgccgatcg atggccagcc gtgcagccac ggcaacggct cgaccgtcgg
     5701 tttcaaggcc cagagcccgg aacaggtcga cgcctggcac gctgccggcg ttgcaaacgg
     5761 cgggaccgcc atcgaggagc cgcccggaat ccgcgatggc ggattcggca agatgtatct
     5821 cgcttatttg cgcgaccccg acggcaacaa gctgtgcggt ttttattcct acccgcggga
     5881 gtaaccgtga agatcgtttc cgaaaacagg tcgcacggcg ggcggcagtt ggtggtcagc
     5941 cacgagtccg gggcgacctc gaccggcatg accttctcga tctttcttcc gccgcaggcg
     6001 gagacagggc cgacacttcc ggtcgtctgg ttcttgtccg gcctcacctg cagcccgatg
     6061 aacgtcaccg agaaaggcga gtaccgggcc gcctgcgccg agcttggcct cgcgttcgtc
     6121 gcccccgaca cgagcccgcg cggcgagcat gtgccgacgg accctgccgg cggctgggac
     6181 ttcgggctcg gcgcgggatt ctatgtcgat gccaccgagc agccgttcgc gcgcaattac
     6241 cggatgtgga cctacgtcac cgaagagctg cccgcgctcg tggccagcga attcccggtc
     6301 gacatggacc ggcaggcgat caccggccat tcgatgggcg gccacggtgc gctcaccatc
     6361 gcgcttcgcc gcccgattcg ctaccgcagc gtctccgcct tttcgccgat cgtcgcgccg
     6421 tcgcaggtgg cctgggggca gaaggcgctc ggcggctatc tcggcgagga tcgaaacgcc
     6481 tggcgcaagc atgacgcggt ggcgctgatc gaagatggcg ctcgagttcc ggagatgctc
     6541 gtggacgtcg gcgacgagga ccctttcctc gaccagcagc ttcgtcccga gcttctggag
     6601 caggcctgcg cgtatgccgg aattggcctg acgctcaggc gccagcccgc atacgaccac
     6661 agctattatt tcgtctcgac cttcatggcc gagcatttgc ggtggcatgc tgaaaggctg
     6721 ggcaggtgat cgaatcgctc gagccctggg cgcaagaggc gatccgggtc tgggctgggc
     6781 ttgccgtcgg agcgctcgtg ggactcgagc gcgggttcaa gctgcaatcg cagcgcgagg
     6841 ggcaccgggt cgccggtttc cgcacattca ctcttatggg acttacggct gggatctcgg
     6901 ggctgctcgc cggcagccag ccgttcgtct ctgccgcagt ggttgcggcg atgctcggat
     6961 acctcgctat cgcttatgct ccgaagctga aggcgaaagg ggactcgacg agcccgatag
     7021 cggcggccgc gaccatcgcg atcgccttcc tcgccggcat tggcgaagtc ccgctggccc
     7081 tggcttcggt cgcgattgtc gtcttcatcc tggcgctcaa ggaggacctg cataatctcg
     7141 tcgagagact tgacgagcgc gacctgaagg cactggcccg gttcggggtc atcgccctgg
     7201 cggtcctgcc gttcctgccg gacgagtcct ttggtccata tggcgcgtgg aacgcgtcga
     7261 agctgtggtg ggtggtaatc ctcgttacgg gcttctcatt cgccggctac gtcgccaacc
     7321 gcttgttcgg ttcgacgcat ggaacgatcg cgacggccgt tatcggcggc gcctatagct
     7381 ccacggcggt tacgcagtcg ctcgcgcagc gtctcggctc caaggaaggc ggcggcgcgg
     7441 agccggccgg aatcgcgctg gcaagcgcgg tcatgtacct gcgagttatc gtgctcgtcg
     7501 cgatcattgc gacccgggtc ctgctcgatt tcctcatagt ggtcgcgcct gcgctggtcg
     7561 tcggcggcat tgccggctgg tggctctatc gctccgcccc gcaccagaag ggcccagcgc
     7621 cgcccggcaa cccgattgcg ctattgccag cgctgacctt cctcctgttc ctggcggctg
     7681 ccgccgtggt cgcccgctgg gctgaggcca gtttcggcca ggaagggatt gctgtgctgc
     7741 tgctgatcat gggcagcctc gatgtggacg ccgcgatcgt caccgccggc gggcttccgg
     7801 aaaatgctat ttcctccgag cttgcggcaa tagcgctcgg cggaaccatc cttgccaaca
     7861 tggccgtgaa gctgggggtg acactggctt atgcgcgagc gaagggcgtt tcggctgcga
     7921 tcgctttggc cgccagcatg gtcgcgctgg cgatcagcat cggcgttgca ttgctgagtc
     7981 tttaggtaac gcctggcacc ggctgtcacc aatttcttcc gcatgccccc agcatgcggg
     8041 aaattggtga ccccaacggg actcgaaccc gtgttttcgc cgtgaaaggg cgacgtccta
     8101 gaccgctaga cgatggggcc gggaaagcgg agggcgagtt aggcgagcgg tccgaacggg
     8161 tcaagcgagc gcggcgtcat cgagatgcat ttccgccgca ttgccgccgt tccactcgtc
     8221 gcgcttgacg cttccggcca gccaccagcg gcggtccccc ggcgacgaga gaagggcctg
     8281 accaagctcg gtttcggctt gccgaaaggc aatccacttg aagctcttgc cgtcgtcgcc
     8341 gcaggcaagg ccgcgaacgt ggccgttgcc gacgattccc gtccggagca ggcgggccgg
     8401 gcccgccacg atcttgggcg agggccagcc ggcgccgtag gggcctcccg catcgagcga
     8461 atcgcagagc ccgccgacaa tccctcccgg cgccagaagc gcgtcgacca gcaacgcccg
     8521 cccgtcacgg gagcgttcga cgtcggccgc caagcgctcg ttgatgaagt cctggaatgg
     8581 ttccagtcca cccttcggca gagtcagtcc agccgccatc gcatggccgc cgccggcgat
     8641 cagcaatccg ctgtccttcg ccgcgagcac cgcggctccg aggtcgaccc cggaaatcga
     8701 ccgccccgac cccttgccgg ttccgtcctc gcactcagcg atgacgatgg cgggccgccc
     8761 gaaccgctct ttcagccggc ctgcgacgat cccgatcacg ccctggtgcc agccgctgga
     8821 catcacggta atcacggcgg cgccgttgag tttcgccgcc tgctcctcgg cctgctcgca
     8881 gaccgtcatc tcgatcgccc gccgctcctc gttcaggcgg tcgagctcgg cggcgaactc
     8941 ccgcgcttcc tccgggtcgg tgcaggtcag gagccggact cccaggtcgg acttgccgac
     9001 gcggcccccg gcgttgatcc tgggcccaag cgcaaaacct aggtctcggc agctaggtgg
     9061 cttgaccagc cgcgccgctt cagcgagcgc cacaagcccg aggttcttcc gggccgccat
     9121 caccttcagt ccctgggcga cgaacgcgcg gttgagccct tgcagcttgg cgacgtcggc
     9181 gaccgttccc agtgcgacga ggtcgagaag gtcgaggatt ctgggctcct cgcgtccgtc
     9241 gaggaagccg cggcccctga gttcgcgaag cagggcaacg ccgagcaaga aggccattcc
     9301 gaccgcggcg acatgtccgt gcgccatgcc gatctcgccc tcgtcgagcc ggttcggatt
     9361 gatcatcgcg aacgccaccg gaagcagggt cgcgcactgg tggtggtcga cgacgattac
     9421 gtcgagcccg gcggacttcg cctcctcgag cgcctcgaac gcctgggcac cgcaatcgac
     9481 cgtgacggcc aggcttgccc cgcggttctt gagctcgacg agcgccgctc cggacgggcc
     9541 ataaccctcc atcagccggt cggggatata gaccatcgga tcggagccga gctgcctcag
     9601 gagcaaggtc aggagcgctg cgctcgtggc cccatcgacg tcatagtcgc cgaaaagcgc
     9661 aatcgtctcg ccccgctcga cagcgtcggc aaggcgcttg gcgcccttgt ccatgtcgcg
     9721 gaacgccgac gggtcgggga ggaagtcgcg gattcgcgga tcgcggttgc ggccgaggtc
     9781 gtcacgaggc acgccgcggg cgagcaggag ctcgtcgaca agcgaatcca ttccggcggc
     9841 gggctcgcgc gcgccgcgcc atttccacgg ctgcccgctg atcgaccgct caacgccaag
     9901 cgcaaaggtc attcgatatg ctctagcagc tggccgcgca ggttgcgcgc ggcttcctcg
     9961 ctgagcgcgg gaatcctgtg gatcgacaga cctgttccgc cggcgactcc gaaggtgatg
    10021 ccggcgattc cgaaccaccg gccgatgaag ctttgtgaaa ggtcgatgct ctggatccgg
    10081 cggatcggga gaatcaggat tcgccggcgc caccagccgc tgcggatcag gatccggttg
    10141 ccgtcgagcg aaaatccggt tcggcgccac gccagccagc gaagcgcgac cgcgccgagg
    10201 atcacgacta tcccgatcgc tcccgctatc ggaacgaaga ccatatcgac aa
//
LOCUS       DATAKH010000154        10543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32548,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000154 DATAKH010000000
VERSION     DATAKH010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 10543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10543
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32548"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..903
                     /locus_tag="VHN55_06425"
     CDS             94..903
                     /locus_tag="VHN55_06425"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008993356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004057 - arginyl-tRNA--protein
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016598 - protein arginylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEX2803603.1"
                     /translation="MSAPFRFPKFFVTSPSPCPYLPGKVERKVFTELNGRNASELNEA
                     LGRIGFRRSQSVAYRPSCIDCSACVSVRVVATEFQASTTQRKILRRHSDLEVIACKPW
                     TTEEQYALLRRYLAARHPGGGMAEMDETDFADMVEQTPVRSYMIEYREPSKKGRPGKL
                     VGCCLSDQQNDGLSMVYSFFDVGKDARKGLGTFIILDHIVRAARAGLPYVYLGYWVQG
                     SRRMDYKTRFRPLERLGRDGWRRTDEAGQETAETTVELPNRRLRRRLFIDA"
     gene            1048..1473
                     /locus_tag="VHN55_06430"
     CDS             1048..1473
                     /locus_tag="VHN55_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017183707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudoazurin"
                     /protein_id="HEX2803604.1"
                     /translation="MRIGVVLAGAVAIAAIASSASAKDHRVKMLNKGSAGAMVFEPAI
                     IKIAPGDTVTFVATDKGHNAETIRGMLPDGAVPFKGKINQEVTVKFAKPGVYGYKCLP
                     HYGMGMVGAIIVGKPTNLGSAKAVSHPGKAKQTFAAILK"
     gene            complement(1606..2649)
                     /gene="nirK"
                     /locus_tag="VHN55_06435"
     CDS             complement(1606..2649)
                     /gene="nirK"
                     /locus_tag="VHN55_06435"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HEX2803605.1"
                     /translation="MRKFLLASTVAAIAAASPAVAGDAGHSTAAAPSVADIVRSPSDL
                     PGPLARRGPELVKVNLETVEVTGQLDDGATYRYWTFNRQVPGPFVRVRVGDTVEVTLK
                     NADDSSVMHNVDFHAVTGPGGGAVATMAAPGETKGFTFKALQPGLYVYHCATPMVAQH
                     IANGMYGMILVEPEGGLSKVDREYYVMQGEIYTEQAHGEKGELTESLEKLVAEQPDYM
                     VFNGAVDGLTRKPLTARTGETLRVYFGVGGPNKTSSFHAIGEIFDKAWSLASITSAPM
                     TDVQTLTVPPGGAAVVDFKVEVPGKFILVDHALSRLEKGLKGVIEVTGEQRADLYRPH
                     EEVDSKMAEASGH"
     gene            complement(2834..3547)
                     /locus_tag="VHN55_06440"
     CDS             complement(2834..3547)
                     /locus_tag="VHN55_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2803606.1"
                     /translation="MRVLLIEDEPTTAKSIELMLGTEGFNVYTTDLGEEGLDLGKLYD
                     YDIILLDLNLPDMHGYDVLKKLRTSKVSTPVLILSGIGEMDSKVRALGFGADDYVTKP
                     FHRDELVARIHAIVRRSKGHSQSVIRTGKLAVNLDAKTVEVDGSRVHLTGKEYAMLEL
                     LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLSLACGGANYIETVWGRG
                     YVLRDPDEVSEPEPEAAVA"
     gene            3691..4407
                     /locus_tag="VHN55_06445"
     CDS             3691..4407
                     /locus_tag="VHN55_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HEX2803607.1"
                     /translation="MHQLVKRTSVGEAAIDKSEADEDSLSGRVLFIDGEAMVIDKPAG
                     LPVDAPRRGGDNVQARVQELRFGFRSSPTAMHRLDQDTSGCLLLARNARARAALQQTF
                     EARLVEKYYLAVVAAEIAASEGVIDLPLAKRSSAEAGWRMVADPQGQEALTRWRRVAV
                     REGRSLVEFRPLTGRTHQIRVHAREAFATGIVGDRVYGVPGGQMLLHAVRLVVPRANK
                     ATIDVTAPLPERFGEWRDEA"
     gene            4397..4807
                     /gene="arfB"
                     /locus_tag="VHN55_06450"
     CDS             4397..4807
                     /gene="arfB"
                     /locus_tag="VHN55_06450"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008071102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HEX2803608.1"
                     /translation="MKPEDVIIPEEALSETFLAATGPGGQNVNKVATAVQLRVDLFRL
                     GLSEGPLERLKAIAGSRLTSAGELLITARRFRTQESNREDARRRLAEMIAQAHIVPRK
                     RRPTRPSRAAKAKRVDEKKQRSAVKRGRGKVSFD"
     gene            4807..5286
                     /locus_tag="VHN55_06455"
     CDS             4807..5286
                     /locus_tag="VHN55_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007012622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEX2803609.1"
                     /translation="MYDFKITAADNPALYRDLGEALESLVAGEPDPIANMANAAALIW
                     ETLPDLNWAGFYRNVGGELVVGPFQGRPACIRIPFGSGVCGTAAATRQVQRVDDVDAF
                     PGHIACDSASRSELVVPIERGGELIAVLDLDSPSPARFTQEDEAGCVALASILAHAI"
     gene            complement(5287..7329)
                     /locus_tag="VHN55_06460"
     CDS             complement(5287..7329)
                     /locus_tag="VHN55_06460"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEX2803610.1"
                     /translation="MNKIALFAAAAAAALASSPALARPMTATDLHMMHRMGAPAVSPD
                     GRYAVFTLSDTDLDANRRNNRLHLLDLTKPGAAPQPIAGAEKGHDPMFTADGSLWFLM
                     PVGERDQLFQMKIGGTPAQASDFGADISGYKVSANGATVVVWADTADCPDLACAAASL
                     PAKPEGSGRTYDKMFVRHWDTWAEPGIRSRLYAFPVQADRLTGGGVRLTQGLEGDTPS
                     KPFGGGEEIAVSADGKYIWYALREAGRIEPLSTNLDIFEAPTDGSAPPRNLTDANDAT
                     DTLPALSPDGRMLAYVAMARPGYESDRQVVQLYDLASRAVKPLTQNWDRSVGSIEWAP
                     DGKSLLVTAGDTLEHPVFRVDVATGKVTRLTKDGNFGNVHALRGGGAIATMNSMMAPD
                     DLYRVQNGRVTQLTAVNRDRLAELDPVKLDKFSFAGANNDTVWGWTLKPADTSAKLPI
                     AFLVHGGPQGSFSNSWSYRWNPRLFTAPGYAAVSVDFHGSTGYGQAFTDSINRDWGGK
                     PLQDLKLGLAHATANDPQLQADNACALGASYGGYMMNWIEGNWPDRFKCLVQHDGVFD
                     ARAMAYETEELWFDEWEHGGVPYHEAPAEYEKWNPVNYVKQWKTPQLVITGEKDFRIP
                     YTQGIAAFTALQRRNIPSRLLVFPDENHWVLKPKNSIQWYGEVFAWLERWLGPGAK"
     gene            complement(7370..7792)
                     /locus_tag="VHN55_06465"
     CDS             complement(7370..7792)
                     /locus_tag="VHN55_06465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HEX2803611.1"
                     /translation="MQSPSREPSMEDILASIKKVIAEEKELRTAVEAAENSRQPDEEE
                     AGEPEDVLELDHPIEPAEDPGPPLLDEEAAESSRHSLEELSTIAATVPPAPAVNPLED
                     MVREMLRPILKEWLDEHLPTIVNEHVKREISRITGRKL"
     gene            complement(7807..9279)
                     /locus_tag="VHN55_06470"
     CDS             complement(7807..9279)
                     /locus_tag="VHN55_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HEX2803612.1"
                     /translation="MTVTRYRLLLSASLVAALAAGTASADTLREALLSTYATNPTLTA
                     QREALKATDAGVAIARAGGRPQITGVVGVNRNLTRSGVIAATQGDDHNISLSGGVDLS
                     LPLFQGGRVRNSVQAAKTRVEAGRATLRAVEGDVFTAAVAAYMDVIRDRAIVELNQNN
                     VRVLETNLEATRDRFEIGDVTRTDVAQSEARLELGRANLATVQGRAAASEQEYRRIIG
                     HPPGELAPPPPLPPLPATPEEAVRIALANNADIVAINRQAEAAGYDVSVARAQRLPTL
                     SATATGDYINQVTGDTNGLDRSGTATAIGISGRIPIYQGGEAGARIRQAQAIEGQTLE
                     QTIATERLVVAQARSAFETYEAATDAIAANQVAMQANELALEGARAERQVGTRTVIEV
                     LNAEQELLNAQVALVTAKRDQYVAGFQLLNAMGQAEARDLGLEGGPLYDPLGNYRRVA
                     GDWSDWSSDPRHVPVATRTVTPAETGAAVPPSQGVTPPQQ"
     gene            complement(9288..9938)
                     /locus_tag="VHN55_06475"
     CDS             complement(9288..9938)
                     /locus_tag="VHN55_06475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX2803613.1"
                     /translation="MTIHAPVPDYAAARASMVDTQLRPQGVNFPPVVEAMAAVPREEF
                     VAEDSRPLAYIDRSVPIGEGRLMSGPVVLGLLLTELAPIRGERALVVGCGTGYSAAVL
                     GRIGLKVTGLECSSALAKRARDKGIEVVEGPLQQGWQAGAPYHLILIDGAVEYIPEAI
                     IAQLTDHGRVGTALVDRGICRLAVGRRAGKGFGLHTMADAGAVALPGFARPQKFTF"
     gene            10120..10193
                     /locus_tag="VHN55_06480"
     tRNA            10120..10193
                     /locus_tag="VHN55_06480"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10152..10154,aa:Cys,seq:gca)
BASE COUNT         1787 a         3372 c         3456 g         1928 t
ORIGIN      
        1 ctgatccggg acagttcttc gcaaagctgc gccgcggacc gccaccaact ctttccaaag
       61 gcgtttacca gtcgcataaa cagcggcgaa accatgagcg caccgttccg atttcccaag
      121 ttcttcgtga cgagcccgtc gccgtgcccg tatctgccgg gcaaggtcga gcggaaggtc
      181 ttcaccgagc tgaacggacg caacgcaagc gaactcaacg aggcgcttgg ccggatcggt
      241 ttccgccgaa gccagtccgt cgcctaccgg ccgagctgca tcgactgcag cgcctgcgtc
      301 tcggtccgcg tcgtcgcgac ggagttccag gcgagcacga cacagcgcaa gatccttcgc
      361 cgtcactccg accttgaagt catcgcctgc aagccgtgga cgaccgaaga gcaatatgcg
      421 ctccttcgcc gctatctcgc cgctcgtcat cccggcggcg gaatggccga gatggacgag
      481 accgacttcg ccgacatggt cgagcagacc ccggtccgaa gctacatgat cgaatatcgc
      541 gagccgtcga agaagggtcg gcccggcaag ctggtcggct gctgcctctc cgaccagcag
      601 aacgacgggc tgtcgatggt ctacagcttc ttcgacgtcg gaaaggacgc gcgcaagggg
      661 ctcggcacgt tcatcatcct cgatcatatc gtcagggccg cgcgagcggg tctgccctat
      721 gtctacctcg gctattgggt ccagggctcc aggcggatgg attacaagac gcgcttcagg
      781 ccgcttgaac ggctcggccg cgacggctgg cgccggaccg acgaagccgg acaagaaacg
      841 gccgagacga cggtcgagct gccgaaccgc cgcttgcgcc gccgtctctt catcgacgcg
      901 taggcgggct gatgttcggt gcgccggcac cgatcggaaa tttcgtgaaa atcgggaatt
      961 gatccaccgc aacgcctgcc gccgacagcg cgcctagtgc gagtgcagcg gtgcgcagct
     1021 agcgcccccg aaccaacgga gataaagatg cgtatcggag tagttctcgc tggagcggtc
     1081 gccatcgcgg ccattgcttc gtcggcctcg gcaaaggacc atcgggtcaa gatgctcaac
     1141 aagggctcgg cgggggccat ggtcttcgag ccggcaatca tcaagatcgc gccgggcgac
     1201 acggtcacct tcgtcgctac cgacaagggc cataacgccg agaccatccg cggcatgctt
     1261 cccgacggcg cggtgccgtt caagggcaag atcaaccaag aggtcacggt gaagttcgcc
     1321 aagcccggcg tctacgggta caaatgcctg ccccactacg ggatgggcat ggttggcgcg
     1381 attatcgtcg gcaagcccac aaaccttggc tctgccaagg ccgttagcca tccgggcaag
     1441 gcgaagcaga ctttcgccgc catcctcaag taaatcgcgc ggaccgggag tccgaacagg
     1501 cgccggtccc caggggccgg cgcctttttt gcgcattgca aaggcgcaag aaaaagcggc
     1561 ggcggattgc tccgccgccg ctcccccctc ggctgaacat gggcgtcagt ggcccgaggc
     1621 ttccgccatc ttggagtcga cctcttcgtg cgggcggtag agatcggccc gctgctcgcc
     1681 ggtgacctcg atcacgccct tgaggccttt ctccaggcgc gacagcgcat ggtcgaccag
     1741 gatgaacttg cccgggacct cgaccttgaa gtcgacgact gccgctccgc ccggtgggac
     1801 cgtcagggtc tggacgtcgg tcatcggggc ggaggtaatc gaggcaagcg accaggcctt
     1861 gtcgaaaatc tccccgattg cgtggaagct cgacgtcttg ttgggtccgc cgacgccgaa
     1921 gtagactcga agcgtttccc cggtccgtgc cgtaagcggc ttcctcgtca gcccgtccac
     1981 cgcgccgttg aagaccatat agtccggttg ctcggcgacg agcttttcca ggctctcggt
     2041 tagctcgcct ttctctccgt gcgcctgctc ggtgtagatt tcgccctgca tcacataata
     2101 ttcgcggtcg accttgctca gcccgccttc gggctcgacc aggatcatcc cgtacattcc
     2161 gttggcgata tgctgagcga ccatcggcgt cgcgcagtgg tagacgtaga gaccaggctg
     2221 aagcgccttg aaggtgaatc ccttggtctc gcccggcgcc gccattgtcg cgaccgcgcc
     2281 gccgcccggc ccggtgaccg cgtggaaatc gacgttgtgc atgaccgagc tgtcgtcggc
     2341 gtttttcagc gtcacttcga cggtgtcgcc gacacgtact cggacgaacg gcccgggaac
     2401 ctggcgattg aaggtccagt aacgataagt cgcgccgtca tcgagctggc cggtaacctc
     2461 caccgtctcg aggttgacct tgacaagttc ggggccgcgg cgagcgagcg gtccgggcag
     2521 gtcggaaggg cttcgcacga tatctgcgac cgacggcgcc gcggccgtgg aatgcccggc
     2581 gtccccagct accgcgggag aagcggccgc aattgccgcg accgtgcttg cgagcagaaa
     2641 tttcctcatg tgcttgcctt tcattcgaaa agttcgatga aaggcggcct agagcggttt
     2701 cgatcgccgc cacttgttcc agatcaattg cgagcgccat ttgatccagg tcatggcggc
     2761 tgcgcaggag gcgaaaaaga aagaggcgga gcctttcggc cccgcctcga tcatccccct
     2821 gatctgaatt cggttaagcg acagccgctt ccggctccgg ctcgctgacc tcgtccgggt
     2881 cgcgaagaac gtagccgcgg ccccagacgg tttcgatgta attggcgccg ccgcaggcaa
     2941 ggctgagctt cttgcgcagc ttgcagatga agacgtcgat gatcttgagt tcgggctcgt
     3001 ccatcccccc gtagaggtgg ttgaggaaca tttccttggt cagcgtcgtg cccttgcgga
     3061 gcgagagcag ctccagcatc gcatattcct tgccggtcag atgcactcgg ctgccgtcga
     3121 cttcgacggt cttggcgtcg aggttcaccg ccagcttgcc ggtgcggatg accgactgcg
     3181 agtgcccctt cgagcgccgg acgatggcgt ggattcgcgc gaccagctcg tcgcggtgga
     3241 acggcttggt cacataatcg tcggcgccga agccgagcgc gcggaccttg ctgtccatct
     3301 cgccgattcc cgacaggatc agcaccggcg tcgaaacctt cgaagtgcga agcttcttga
     3361 gcacgtcata gccgtgcatg tcgggcaggt tgaggtcgag caggatgatg tcgtaatcgt
     3421 acagcttgcc cagatcgagg ccttcttcgc caagatccgt ggtgtagacg ttgaagccct
     3481 ccgtcccgag catcagttcg atgctcttgg ccgtcgtcgg ctcgtcttcg atcagcagca
     3541 cgcgcatcga tgttcccccc gttcgcggcc cgcacgagca caatcgtaac tcgctcttaa
     3601 cggccttgaa gcctgcatta accattcgag ggatgaaggc aaaaggttaa taaagtgtaa
     3661 caggctggaa tcctttgatt cgttgcggca gtgcatcagt tggtaaaacg cacgtccgtt
     3721 ggggaggctg caatcgacaa gtccgaagcg gatgaagaca gcctgtccgg gcgagtcctt
     3781 ttcatcgacg gcgaggcgat ggtgatcgac aagccggccg gccttccggt cgatgcgccc
     3841 aggcgcgggg gcgataatgt ccaagcgaga gtgcaggagc tgcgcttcgg atttcgatcg
     3901 tcgccgaccg ctatgcacag gctggaccag gacacatccg gctgtcttct gcttgcacgc
     3961 aacgcgcggg caagggcggc tcttcagcag acgttcgaag cgcggctggt ggaaaaatat
     4021 tatctcgccg tggtcgccgc cgagatcgct gcttcggagg gtgtcatcga cctgccgctt
     4081 gcaaagcgct ccagcgccga ggcgggatgg cgaatggtcg ccgacccaca gggtcaggag
     4141 gcactgactc gatggcggcg agttgccgtt cgcgaaggcc gctcgcttgt cgaattccgg
     4201 cctctcaccg gccggacgca ccagattcgc gtgcacgcgc gcgaagcatt cgccactggc
     4261 atcgtcggcg atcgagtcta cggcgttccg gggggacaga tgctgctgca cgctgtgcgc
     4321 ctggtcgttc cgagggccaa taaggcaacg atcgacgtca ccgccccgct gccggagcgg
     4381 ttcggagagt ggcgagatga agcctgagga cgtgatcatt cccgaagagg cgctgagcga
     4441 gacctttctc gccgccaccg gcccgggcgg gcagaacgtc aacaaggtcg cgaccgcggt
     4501 gcagcttcgc gtcgacctct tccgcctcgg cctttccgaa gggccgctcg aacggttgaa
     4561 ggcgattgcc ggctcgagac tgacttcggc gggcgaactg ttgatcaccg ctcgtcgttt
     4621 tcggacgcag gaatcgaacc gcgaagatgc tcgccgccgt ctggcggaaa tgatcgccca
     4681 agcccatatc gtcccccgca agcgcagacc gacgcggccg agcagggccg ccaaggcgaa
     4741 gcgcgttgac gagaagaagc agcgaagcgc ggtcaagcgg gggcgaggca aggtgagttt
     4801 cgactgatgt acgacttcaa gatcacagcc gccgacaatc cggcgcttta ccgcgacctc
     4861 ggcgaggcgc ttgaatcgct cgtcgccggc gagccggacc cgatcgccaa catggcgaat
     4921 gcggcggcgc tgatctggga aacgctgccc gacctcaact gggccggatt ttaccgcaac
     4981 gtcggcggcg agctggtcgt cgggccgttc cagggacggc ccgcgtgcat ccgcattccg
     5041 ttcggaagcg gagtctgcgg aaccgcggcg gcaactcgcc aggtccagcg cgtcgacgac
     5101 gtcgatgcct ttcccggcca catcgcctgc gattccgctt cgcggtcgga gctggtcgtc
     5161 ccgatcgaac gcggcggcga gctgatcgcc gttctcgacc tcgacagtcc gtcgccggcg
     5221 cggttcactc aggaggatga agcgggctgc gtcgcgctag cgtcaatcct ggcccacgcg
     5281 atctagctat ttcgcgcccg ggccgagcca gcgttccagc cacgcgaaca cttcgccgta
     5341 ccactggatc gagtttttcg gcttgagcac ccagtggttt tcgtccggga agaccagcag
     5401 ccgcgacggg atgttgcgcc tctggagcgc ggtgaaagcg gcgatcccct gcgtgtaggg
     5461 gatccggaag tccttctcgc cggtgatgac cagctgcggc gttttccact gcttcacgta
     5521 attgaccggg ttccactttt catattcggc cggggcctcg tgatagggca cgccgccgtg
     5581 ctcccattcg tcgaaccaga gctcctccgt ctcgtatgcc atcgctcggg cgtcgaagac
     5641 tccgtcatgc tggacgaggc atttgaaccg gtccggccag ttcccctcga tccagttcat
     5701 catgtagccc ccgtaggagg cgccgagagc gcaggcattg tcggcctgta gctgggggtc
     5761 gttcgcggtc gcatgggcaa ggccgagctt aaggtcctgc aggggctttc cgccccagtc
     5821 gcggttgatc gaatcggtga acgcctggcc gtatccggtc gacccgtgga aatcgacgct
     5881 gaccgcggca tagccgggcg cggtgaacag ccgcgggttc cagcggtagg accagctgtt
     5941 tgaaaagctt ccctgcgggc cgccgtggac gaggaaggcg atcgggagct tggcgctcgt
     6001 atcggccggc ttgagagtcc agccccaaac ggtgtcgttg ttcgccccgg cgaagctgaa
     6061 cttgtcgagc ttgaccgggt cgagctcggc cagccggtcc ctgttgaccg cggtcagctg
     6121 cgtgactcgc ccgttctgga cgcggtacaa atcgtcgggc gccatcatgc tgttcatggt
     6181 tgcgatggcg ccgccgcccc gcagcgcgtg gacgttgccg aaattgccgt ccttggtgag
     6241 gcgggtcacc ttgccggtgg cgacatcgac ccggaacacc ggatgctcga gcgtatcgcc
     6301 tgcggtcacc agcaggctct tgccgtccgg cgcccattcg atcgatccga ccgaacggtc
     6361 ccaattttgg gtcagcggct tcaccgcgcg gctcgcgagg tcgtacagct gcaccacctg
     6421 acggtcggat tcatagccgg gacgtgccat tgcgacatag gccagcatgc ggccgtcggg
     6481 cgacagcgcc ggcagcgtgt cggtggcatc gttggcgtcg gtcaggttgc gcgggggagc
     6541 gctgccgtcg gtcggtgcct cgaaaatgtc gaggttggtc gaaagcggct cgatccgtcc
     6601 cgcttcgcga agcgcgtacc agatatattt gccgtcggcc gaaaccgcga tctcctcgcc
     6661 gccgccgaat ggcttggacg gcgtgtcgcc ctccaggccc tgagtcagcc ggactccgcc
     6721 gcccgtgagc cgatcggcct ggacaggaaa tgcatagagg cgcgagcgga tgcccggctc
     6781 ggcccaagtg tcccagtggc ggacgaacat cttgtcgtag gtgcggccgg agccctccgg
     6841 cttggcagga agcgaggcgg ctgcgcaggc aagatccggg caatccgcgg tatctgccca
     6901 gacgacgact gtggcgccgt tggccgacac cttgtatccg ctgatgtcgg ctccgaagtc
     6961 gctggcctgg gctggcgttc cgccgatctt catctggaac aactggtcgc gctctccgac
     7021 cggcatcagg aaccaaaggg atccatcggc cgtgaacatc gggtcgtggc ccttctcggc
     7081 gccggcgatc ggctgcgggg ctgcgcctgg cttcgtcagg tcgaggagat gtagcctgtt
     7141 gttgcgacgg ttggcgtcga ggtccgtgtc gctaagcgtg aagaccgcgt accgcccgtc
     7201 cggcgacact gcgggcgcac ccatcctgtg catcatgtga aggtcggtcg cagtcatcgg
     7261 gcgagcaagc gccggagagg aggcgagggc ggcggctgcg gcggcagcga aaagggcgat
     7321 cttgttcatg ctgcgggcgt agcaaacccg cgcgtaaccg caaaacggct taaagcttgc
     7381 ggccggttat tcgcgaaatc tcgcgcttca catgctcgtt gacgattgtc ggcagatgct
     7441 cgtcgagcca ttccttgagg atcggccgaa gcatttcgcg gaccatgtcc tcgagcgggt
     7501 tcactgccgg cgccggcggg acggttgccg cgatggtcga aagctcttcg agtgagtggc
     7561 gcgaactttc ggccgcttcc tcatcgagca gcggcggccc gggatcctcc gcaggctcga
     7621 tcggatggtc gagttccaga acgtcttcgg gttcccccgc ctcctcctcg tcgggctggc
     7681 gcgaattttc ggccgcttcg accgcggttc gaagctcttt ctcctccgcg atcacctttt
     7741 tgatcgaggc gaggatgtct tccatcgagg gttcgcggct gggcgactgc atcgggcgat
     7801 aatcgcctat tgctgcggcg gagtcacgcc ttggctgggc ggaacggccg cgcccgtttc
     7861 ggctggcgtc acggttcggg tcgcgacggg gacgtggcgc gggtcgctcg accagtcgct
     7921 ccagtcgccg gcgacacgcc ggtagttgcc gagcgggtcg taaagcggac cgccctcgag
     7981 cccgagatcg cgcgcctccg cctggcccat cgcgttcaga agctggaagc cggcgacata
     8041 ttggtcgcgc ttggcggtca ccagcgcgac ctgcgcgttc agcagttcct gctccgcgtt
     8101 gaggacttcg atcaccgttc gcgtgccgac ctggcgttcc gcgcgcgcgc cctccagagc
     8161 gagctcgttg gcctgcattg ccacctggtt cgccgcaatc gcgtccgtcg ccgcttcgta
     8221 tgtttcgaag gcggagcggg cctgcgcgac gaccagccgc tcggtcgcga tcgtctgctc
     8281 cagggtctgg ccttcgatcg cctgcgcctg gcggatccgg gcgccggcct caccgccctg
     8341 gtagatcggg atccggccgg agattccgat agcggtcgcg gttcccgacc ggtcgaggcc
     8401 gttggtgtcg ccggtgacct ggttgatata atcgccggtc gcggtcgcgg agagcgtcgg
     8461 cagccgctgc gcccgggcga cgcttacgtc gtatccggcc gcttccgcct ggcggttgat
     8521 ggcgacgatg tcggcgttgt tggcaagcgc gattcgcacc gcctcctcgg gtgtcgccgg
     8581 aagcggaggc aggggaggcg ggggtgcgag ctcacccgga gggtgtccga tgatgcgccg
     8641 atattcctgc tcgcttgcag ccgcgcggcc ctggaccgtc gccaggttgg cgcggccgag
     8701 ctccagccgg gcttccgact gggcgacatc ggtgcgggtg acgtcgccga tctcgaagcg
     8761 gtcgcgggtg gcctcgaggt tggtctcgag caccctcacg ttgttctggt tcagctcgac
     8821 gatcgctcgg tcgcggatga cgtccatgta ggcagcgacg gcagcggtga acacgtcgcc
     8881 ctcgaccgcc cgaagagtgg cgcgcccggc ttcgacgcgg gtcttcgctg cttggacgga
     8941 attgcggacc cggccgccct ggaacaatgg caggctgagg tcgacgccgc cgctgaggct
     9001 gatgttgtga tcgtcgcctt gggtcgccgc gatgacgccg cttcgagtca ggttgcggtt
     9061 cacaccgacg actccggtga tttgcgggcg gcctccggcc cgggcgattg cgactccggc
     9121 atcggtggcc ttcaaggcct cgcgctgggc agtcagggtc gggttggttg cataggtcga
     9181 cagcagcgcc tcgcggagcg tgtccgccga cgcagttccg gcggcgagcg cagcgacaag
     9241 gcttgccgag agcaataagc ggtaacgagt cacagtcact ccaagcgtca aaaggtgaat
     9301 ttctgcggcc tcgcgaagcc cggaagtgcc accgcccccg cgtcagccat ggtgtggaga
     9361 ccgaagccct tgcccgctct cctgccaacg gcgagccggc agattccgcg atcgaccaaa
     9421 gcagtgccga cccggccatg gtccgtcaac tgcgcgatga tcgcctcggg gatatattcg
     9481 acggcgccgt cgataaggat gagatggtag ggcgcaccgg cctgccagcc ctgctgaagc
     9541 ggcccctcga caacctcgat gcccttgtcc ctggcgcgtt tggcgagcgc ggacgagcat
     9601 tcgagcccgg taaccttgag cccgatgcga cccaggaccg cagccgaata accggtgccg
     9661 cagccgacga cgagcgcccg ctccccgcgg atcggcgcca gttccgtaag cagcaggccg
     9721 agcacgaccg gcccggacat cagccggccc tcgccaatcg gcacgctccg gtcgatatag
     9781 gcgagcgggc gcgagtcttc ggccacgaat tcctcgcggg gaaccgctgc catcgcttcg
     9841 acgaccggcg ggaagttcac cccctgcggg cgaagttgcg tgtcgaccat cgacgcgcgc
     9901 gcggccgcat aatccggaac tggagcgtgg attgtcataa ggtgttgtat gccagtaata
     9961 cagttgggac gcaacaatgc tttatctgca tcatggacct gcgccaaccc gaaccgcccc
    10021 cgtttgtcga aaatcggagc ttggcgcgta gcatgggcgc cgggggcggc cgttagcacc
    10081 ttgaccgcgg cggcaaaggc cccgaaatgc ggggctctcg gcccgatggc ggagtggtta
    10141 cgcagaggac tgcaaatcct tgcacgccgg ttcgattccg gctcgggcct ccacctccca
    10201 attcgatcga cttatcgatc tcttccgaaa cgcaggcttc ggagcaggcg cgcgaaatcg
    10261 gcgaacgccc ggtaaattaa cgtaaaagtt cgctattgcc gcgcgtcatt ctgtgcgatg
    10321 cctcgtggat taaagccgag tcgcgtccgt ggggggtgcg gcgggtccgg cttcggggga
    10381 gtaaagtaaa atggcagtca ccatctccgg cctgcgcacg cgcacgctca ccaccgacat
    10441 cgacggcgac ggccaggcag atccaggcga cgtctattcc tatgacgttg tcataaccaa
    10501 cagcggcaac gagaacgcgc tcctcctaca gctagacgtc acc
//
LOCUS       DATAKH010000155         3553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_12766,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000155 DATAKH010000000
VERSION     DATAKH010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12766"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..784)
                     /locus_tag="VHN55_06485"
                     /pseudo
     CDS             complement(131..784)
                     /locus_tag="VHN55_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008602930.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision.; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
     gene            complement(841..1644)
                     /locus_tag="VHN55_06490"
     CDS             complement(841..1644)
                     /locus_tag="VHN55_06490"
                     /inference="COORDINATES: protein motif:HMM:NF018436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1206 domain-containing protein"
                     /protein_id="HEX2803614.1"
                     /translation="MRAEPAEEGKFQWLARLGFVTRGLLYIVIALLVLATGRTEDLGG
                     ALEYLGSGVGKWLVVVMGAGMTGYGLWRLADAAFGMDSGRHHPKAWRRRAAAGISGTI
                     YLALAYQAFSLLLGGDISGNGAEDGARTALGLPEGQLVLSGAAIVLAGAAFVQLHKSA
                     TCSFLERLDERARENWTRWMGRIGYGARGIVFAVAAYMLYRAAMAENPSAAGGLEQVL
                     DVLSGGVRFAVAIGLMIFGGYSLVEARYRSVHKPPIDHIKQQVREKVAG"
     gene            complement(1761..2432)
                     /locus_tag="VHN55_06495"
     CDS             complement(1761..2432)
                     /locus_tag="VHN55_06495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2803615.1"
                     /translation="MWQLYQFPLCPFSRKVRLVLTEKGIAHELLRENPWERRDEFIDL
                     NPAGETPVMVDSEAGVVLIGSQPIVEYLDETVEKMPMIHGNAVLRAEIRRLVEWFDEK
                     LYREAVEPLMNERMRKRLVSRESPDTRVLRDSMRIANGHLDYLDYLLDHRRWLAGPGL
                     SLADFTAAAHLSVIDYLGALDWRGHQQTQDWYAVMKSRPCFRPLLGERMEVIVPPQHY
                     DKVDF"
     gene            complement(2463..2990)
                     /locus_tag="VHN55_06500"
     CDS             complement(2463..2990)
                     /locus_tag="VHN55_06500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEX2803616.1"
                     /translation="MTLYRLGDVAPAIADDAWAAPSADLIGDVRLAPRSSVWFGAVIR
                     ADNTPILIGEESNLQDGAVGHSDPGAPLTVGARVTIGHQAIVHGCTIADDCLIGMGAR
                     ILNGAVLGPECLVGAGALITEGKAFEGGSLIVGAPARVIRPLTDDEKAAIRVSAAHYA
                     EKAARYAAALQRLDA"
     gene            complement(2991..>3553)
                     /locus_tag="VHN55_06505"
     CDS             complement(2991..>3553)
                     /locus_tag="VHN55_06505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803617.1"
                     /translation="VRAKPTISKEDPLVAGIAGDSFESVEGFWVPRPWLLQATCPAAA
                     ALTPRPAAGDEGEETATDSAKESSPAETRQVAEATEAKGEPVPTAPRVGIAQFFTSQD
                     PRTRRRDSRPYSTVKTLPEGTPVASQGFNLVLSGRLRALPGRGVIECVGKGADTPPEC
                     VVSAEFLHVWIERPDSGEVIAEWGSG"
BASE COUNT          600 a         1215 c         1123 g          615 t
ORIGIN      
        1 ccgttcgccg gaggcgcggc atcgaaagcg cccacgtcga cgctgctgac cctgcgaaac
       61 cgaggttgtg tgacaacaat atcgctccgg gagcaccaag gaccttcaag gcggcgcttc
      121 gcttcggctt ctaacctgca agcttctccg cccgtttcca caccagcttc atctccgcga
      181 tgaaccgttc gcgttcctcg cggcggcggt cgcggtcggc catccgcaac atcgcgctcg
      241 ggtgcatggt cacccagcat tcggatccgt cggcaagctc gatcggcgat cctcggacct
      301 tgccgattgt gacggccttt ccgatcagcg agcgcgccgc ggttgcgccc agcgcgacgg
      361 taacctgcgg ccggatcagt tcgcgctcat gctcgatcca ccagcggcag gcctcgatct
      421 cgcctgcatc gggcttgttg tggattcgcc gcttgccgcg agcgacgaac ttgaaatgct
      481 tgacggcgtt ggtgacgtag gtctgggacc ggtcgactcc ggccttctcg agcaggctgt
      541 cgaacagctt cccggcggga ccgacgaacg gacggccggc aaggtcctcg gcgtcgccgg
      601 gctgctcgcc gacgaagacg atcttggcat tgagcggtcc ttcaccgaag acggtctggg
      661 tggcgtgctt gtagaggtgg caacgggtgc acgaccgcgc ccctttcagc agctcctccc
      721 acgacgatcg gaggttgctc gaccgggcga tcttccgctc cgcttcaagc gcgcgcttca
      781 acccttcgga agcgaccgcc tcattggcag aagattgcgc cattacccgg atgcaacgct
      841 tcagccggcg accttttccc gcacctgctg cttgatatgg tcgatgggcg gcttgtggac
      901 cgaccgatag cgtgcttcga caaggctgta gccgccgaag atcatcaacc cgatcgcgac
      961 ggcgaatcga actccgcccg acagcacgtc cagcacttgc tctagcccgc cggccgccga
     1021 aggattttcg gccatcgccg cgcgatagag catatatgcg gcgaccgcga agacgattcc
     1081 gcgcgctccg tagccgatcc gccccatcca ccgcgtccaa ttctcgcgag cacgctcgtc
     1141 cagacgctcg aggaacgagc aggtcgcgga cttgtgcagc tggacgaacg cggcgcccgc
     1201 gaggacgatt gccgcgcccg acaggacgag ctggccctcg ggcaagccga gggccgttct
     1261 tgcaccgtcc tcggcaccgt tgcccgagat gtccccgccg agcagcaagc tgaatgcctg
     1321 gtaggcgagg gcgagataga tcgtgccgct aatcccggcc gcggcacgcc gccgccacgc
     1381 cttcgggtga tgcctcccgc tgtccatgcc aaatgcggca tcggcgaggc gccatagtcc
     1441 gtaacccgtc attccggcgc ccatgacgac gaccagccac ttgccgactc cgctgccgag
     1501 atattccagc gcgccgccca ggtcttcggt tcggcctgtt gcgagtacga gcaatgcaat
     1561 gacgatgtag agcaggccgc gggtcacgaa accgagccgc gccagccact ggaacttccc
     1621 ttcctcggcg ggctccgcgc gcaactcgct tacaacccgg gctcgttcgt gccgcagcgg
     1681 cggtttgaat ccttatgcat cggccaagaa cgcccggagc tcgtcatatg ttgcgatgcc
     1741 gcaaggacgt cgctcgacag ctagaaatcg accttgtcgt agtgctgcgg cgggacgatc
     1801 acctccatcc gctcgcccag cagcggacgg aaacagggcc gcgacttcat caccgcgtac
     1861 cagtcctgcg tctgttggtg accgcgccag tcgagcgctc cgagataatc gataacgctg
     1921 agatgcgccg ccgccgtgaa gtcggcgagg cttaggccgg gtccggccag ccagcggcgg
     1981 tgatcgagca ggtaatccag ataatcgaga tggccgttgg cgatacgcat cgagtcccgc
     2041 aggacccggg tgtcggggct ctcgcggctg accaggcgct tgcgcatgcg ctcgttcatc
     2101 agcggctcga cggcttcgcg gtacagcttc tcgtcgaacc attcgaccag ccgccggatc
     2161 tcggcgcgaa gcacggcgtt gccgtggatc atcggcatct tctcgaccgt ctcgtcgaga
     2221 tattccacga tcggctggct tccgatgagg accacgcccg cttcggaatc gaccataacc
     2281 ggggtctcgc cggcggggtt caggtcgatg aactcgtcgc gccgctccca cggattctcg
     2341 cgcaacagct catgcgcgat ccccttctcg gtaaggacca gccggacctt gcgagaaaac
     2401 ggacagagcg ggaattggta aagctgccac atcggatgcc gggcagcttt agcgtgccag
     2461 gctcaagcgt ctagacgctg gagcgcggct gcatagcgag cggctttctc cgcataatga
     2521 gcggccgaaa cgcggatcgc cgctttctcg tcatcggtta acggccttat gacgcgcgcc
     2581 ggtgcgccga cgatcaggct gccgccctcg aaagccttgc cttcggtgat cagcgcgccc
     2641 gcgccgacca ggcattcagg gccgaggact gcgccgttga ggatccgggc gcccatcccg
     2701 atcaggcagt cgtcggcgat cgtgcagccg tggacgatcg cttggtggcc gatcgtgacc
     2761 cgcgccccga cggtcagcgg agcgccggga tcggaatggc cgactgcgcc gtcctgcagg
     2821 ttgctttctt cgccgatcag gatcggagtg ttgtcggcgc gaatcactgc tccgaaccag
     2881 acgctcgagc gtggagcaag gcggacatcg ccgatcaagt cggccgaggg cgccgcccac
     2941 gcatcgtcgg caatcgcggg cgcgacgtcg cccagccggt acagcgtcac ttagccgctt
     3001 ccccactcgg caatgacctc gccggagtcg ggtcgttcga tccagacgtg caggaactcc
     3061 gccgaaacca cgcattcggg cggcgtgtcg gcacccttgc cgacacattc gatgacgccg
     3121 cgcccgggaa gcgcgcgcag ccggccggag aggaccaggt tgaagccctg cgacgccacg
     3181 ggcgtgccct cggggagagt cttgacggtc gaatagggac gcgaatcgcg ccggcgagtc
     3241 ctcgggtcct gactggtgaa gaattgggca atgccgactc gcggcgccgt cggaacaggc
     3301 tcgccctttg cctccgtggc ctccgccact tgcctggtct cagccgggct cgactccttc
     3361 gccgaatctg tcgcagtttc ctcgccctca tccccggcgg ccggccgcgg cgtcagtgcg
     3421 gcagcggccg ggcaggttgc ctggagcagc cagggccgcg gaacccagaa gccttcgacg
     3481 ctctcgaagg aatctcccgc gattccggca accagcggat cctccttgga gatcgtcggc
     3541 tttgcccgaa ccc
//
LOCUS       DATAKH010000156         2158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10845,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000156 DATAKH010000000
VERSION     DATAKH010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10845"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(288..374)
                     /locus_tag="VHN55_06510"
     tRNA            complement(288..374)
                     /locus_tag="VHN55_06510"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(338..340),aa:Leu,seq:gag)
     gene            complement(764..1498)
                     /locus_tag="VHN55_06515"
     CDS             complement(764..1498)
                     /locus_tag="VHN55_06515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803618.1"
                     /translation="MPEDAEAAGQEADATPVPEPAPEPGDPAATASAFEPLPGEQEPV
                     GYEPTEPISPGAELVEGPTAVPVPPPGEEPWPEARSDEEQFDPYKEVPDSEEIAAVES
                     ESRSDRKRNWLMGAVIGIILVFVIVAALWLLAPDSLQQRLGFAAAAPTPLQIAPGRPE
                     RQKLASGNELVVVSGRVINPSAKTQQVPPIEAQLRDKGGRLLYSWTIAPPARTLPPGG
                     TATFNSAEMDVPASGLDSTVTLTLKS"
     gene            1719..>2158
                     /locus_tag="VHN55_06520"
     CDS             1719..>2158
                     /locus_tag="VHN55_06520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2803619.1"
                     /translation="MASIVQFESVGLRYGTGAEVLRDLDFTLSRGSFYFLAGASGAGK
                     TSLLKLLYLAQRPTRGRIRLFGHDLGDAAREELPALRRRIGVVFQDFRLIRHLSAFDN
                     VALPLRIAGRNEAEIASAVGEMLDWVGLGDRSGARPATLSGGEQ"
BASE COUNT          351 a          712 c          694 g          401 t
ORIGIN      
        1 cttatggcag ctaccggatc cgtctcgcca aaacctcggc ggaagtcgtc ggggttccag
       61 ccgacctgaa cctggaagtg agagttaccg acgagcatcc agtggtccgg accggctcga
      121 cgactctggg accaagtccg cggatcgcct cttcccaata gtcgtctcgg acgacttatt
      181 cagccgatct tggttttgcg acgcagtcgc aacacgccca gctgcccgac tgtcctcaac
      241 gaaatcacac ggtccgacat gcccccggca tgtcggcttg cgtgtgatgg tgcggtcgag
      301 aagactcgaa cttccacggc ctttcggcca cagcgacctc aacgctgcgc gtctaccagt
      361 tccgccacga ccgcacgtgc atgagaatgg acggcaagag ccgtccgact ggcaaggtcc
      421 gcgcctctat caaagcgatt ccaagcgcgc aatggcggct tcgcaatccc gtatcgggac
      481 tgtgcttaat aggctgttta ccattcggcc cccgcgacgt tacaccggct tatggttctg
      541 ctcgtcctac tcgcttctgc ggcagccgct tcgcacgggg cgacggcggt tccaccgccc
      601 agaatcgaat tggctgcgca agcaacagcg acggtccgga tcgtttccgg ggagcgggta
      661 agcaccggga gcgtgccgca ggttgcaact gtgagcgaca ggaagatgcg tggggccgac
      721 ggtatcgaaa gactcgtccg gttggtcgag tttccctgac gaatcagctc tttagcgtca
      781 gcgtcacagt cgaatcgagt ccgctggcgg ggacatccat ctcggcgctg ttgaacgtcg
      841 ctgtcccgcc cggcggaaga gtccgcgccg gcggggcgat ggtccacgaa tagagcaacc
      901 ggcccccctt gtcgcgcagc tgagcttcga tcgggggcac ctgctgggtc ttggcgctgg
      961 ggttgatgac ccgcccgctg accaccacga gctcgttgcc gctggccagc ttctgccgtt
     1021 cgggccttcc aggagcgatc tgcagcgggg tcggagcggc ggcggcgaag ccaagccgct
     1081 gctgcagcga atccggcgca agcagccaaa gcgccgcgac gatgacgaag acgaggatga
     1141 ttccgatgac cgcgcccatc agccagttgc gtttgcggtc cgatcggctt tcgctttcga
     1201 cggcggcgat ctcctcgctg tcggggacct ccttgtaagg gtcgaactgc tcctcatcgc
     1261 ttctcgcctc cggccagggc tcttcgcccg gcggcgggac cggaacggcc gtcggccctt
     1321 cgaccagctc cgcaccgggc gaaatcggct ccgtcggctc gtagccaacc ggctcctgtt
     1381 ctccgggtaa cggttcgaac gcgcttgccg tcgcagccgg gtcaccgggc tcgggtgcgg
     1441 gctccggaac tggagtggcg tcagcctcct gcccggcagc ctccgcgtcc tcgggcatct
     1501 ggtgccagct gtgcccgcaa gaggcgcacc gaactttgcg gccggctcga ggaatcgcgc
     1561 cgtcctttac cgcatattgc gtcccgcacg acgggcaggt gaggatcatg tgccgcgcgc
     1621 cttaagctta accggccttc ggtaaacagg aatgcgtggg cgttggcaag gcggccccct
     1681 cgtgcgaaag gtcgtgcagg cgtgtgggga gggttgggct ggcttccatc gttcaattcg
     1741 aaagcgtggg cctacgctac ggcaccggtg cagaagtgct ccgcgacctc gacttcacct
     1801 tgtctcgagg gagcttctac ttcctcgccg gagcttccgg cgcgggaaag acgtcgctgt
     1861 tgaagctgct gtacctcgcc cagcggccga cccgcgggcg aattcgcctg tttgggcacg
     1921 acctcggcga cgccgcgagg gaagagcttc ccgcgctccg ccggcggatt ggagtggtct
     1981 tccaggactt ccggctcatc cgccatctct cggcattcga caatgtcgcg cttccgctga
     2041 gaattgcggg tcgcaacgag gcggagatcg cctccgcggt tggcgaaatg ctcgactggg
     2101 tcggcctcgg cgaccgctcg ggcgcccgcc cagcaaccct ttccggcggc gaacagca
//
LOCUS       DATAKH010000157         3491 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_38173,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000157 DATAKH010000000
VERSION     DATAKH010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3491
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38173"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1309
                     /gene="ftsZ"
                     /locus_tag="VHN55_06525"
     CDS             <1..1309
                     /gene="ftsZ"
                     /locus_tag="VHN55_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX2803620.1"
                     /translation="QGVDFVVANTDAQALNTSSADRRIQLGLKITQGLGAGSRPEIGR
                     AAAEESLDEIQQALEGAHMCFLAAGMGGGTGTGAAPVIAKAARDKGILTVGVVTKPFA
                     FEGSRRTRSADAGIEELQQHVDTLIVIPNQNLFRLANSDTTFKEAFEMADEVLQQGVR
                     GITDLMVMPGLINLDFADVRSVMGEMGKAMMGTGEASGDNRAIEAAEKAISNPLLDGV
                     SMKGAKGVIISITGGEDMRLMEVDEAASHIKELVDPDANIIWGSAFNDGLDGKIRVSV
                     VATGIEAEGAVQAQPAKVFAFPSRPATPVAASAAAPEAEADPDSPTDDEDDGDTLELS
                     EEFSEDDGEELVLESDDILTTPVGAPPIAPPSDDEEAGPAEAAAEQPKEEPKAAAGTG
                     GTLFERMQNMARGKAQLGDDPPASDFGSEPMDIPRFLNRQNNQ"
     gene            1439..2692
                     /locus_tag="VHN55_06530"
     CDS             1439..2692
                     /locus_tag="VHN55_06530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803621.1"
                     /translation="MKRVRVAALLLSGVVLAIGTMSSAAFGQAVPIYAESAGDALARN
                     VRTLAESPRDFNALVAAGKAALQLGDAQAAAGFFGRAEEINPNSPLPQVGMGAALVAT
                     GDPNGALRYFARAQQLGATPATIGCDRGLAYDLLGNQVAAQTDYRAALNGADRDEARR
                     RLALSLAISGDKALATSTLQPLLQRRDLGAQRVRALVLALDGDVAGAKSALDLTMPGA
                     SARMGPFFRQLPALSSVQKAAAVHLGIFPENGLAVASISPGEDRLASVEQLLRSQPEQ
                     VAAIPTSYTLPAPAARQRPPLRTASIPDRRAVKAAASPNNNLIQTKKVAGDGGSRIWL
                     QLASGDNAHALPGEFRKIRSRNPSLFTGLNGFVAQTDSRARLLIGPFHSQRDARLFSD
                     ALSSESIRSFTWTSHPGQVVRELPN"
     gene            2706..>3491
                     /gene="dgt"
                     /locus_tag="VHN55_06535"
     CDS             2706..>3491
                     /gene="dgt"
                     /locus_tag="VHN55_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008832 - dGTPase activity [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dNTP triphosphohydrolase"
                     /protein_id="HEX2803622.1"
                     /translation="MTVLATLAARPGSSRGRLHRESDSGPRGPRDIFQRDRDRIIHSV
                     AFRRLRHKTQVFVAPDGDHYRVRLTHSLEVAQIGRTIARALGLNEDLTEMLCLAHDLG
                     HPPFGHAGEDALEEAMADSGGFDHNGHTVRIVTKLETPYAGFDGLNLSWEALEGLAKH
                     NGPVREPGWALAAADAEFDLALDSWPSLEAQVAAIADDLAYDNHDIDDGLRAGLLDFD
                     ALLEVPLVECHWRDIVKRSGELPADKMQRALVRDMIGAMVGDVI"
BASE COUNT          613 a         1210 c         1148 g          520 t
ORIGIN      
        1 ccagggggtc gacttcgtcg tcgccaacac cgacgcgcag gcgctcaaca cctcgtcggc
       61 cgaccgccgc atccagctcg ggctcaagat tacccagggg ctgggcgcgg gttcgcggcc
      121 cgagatcggc cgtgcggcgg cagaggaatc cctcgacgaa atccagcagg cgctcgaagg
      181 cgcgcacatg tgcttccttg ccgccggaat gggcggcggc accggcaccg gggcggctcc
      241 ggtcattgcc aaggccgcgc gtgacaaggg cattcttacc gtcggagtgg tcaccaagcc
      301 gtttgcgttc gaaggctcgc gccgcacccg ctcggccgac gcggggatcg aggagctcca
      361 gcagcacgtc gacacgttga tcgtcatccc caaccagaac ctgttccgcc tcgccaattc
      421 cgacacgacc ttcaaggaag cgttcgaaat ggccgacgag gtgcttcagc agggcgtgcg
      481 cgggatcacc gacctgatgg tcatgccggg cctgatcaac ctcgacttcg ccgacgtccg
      541 ctcggtgatg ggcgagatgg gcaaggcgat gatgggcacc ggcgaggctt cgggcgacaa
      601 tcgcgccatc gaggctgccg aaaaggcgat ctccaacccg cttctcgacg gggtgagcat
      661 gaagggcgcc aagggcgtga tcatctcgat caccggcggc gaggacatgc ggctgatgga
      721 agtcgacgaa gccgccagcc acatcaagga actggtcgac cccgacgcca acatcatctg
      781 gggatcggcg ttcaacgacg gcctcgacgg caagatccgg gtctcggtcg tcgccacggg
      841 gatcgaagcc gagggagccg tgcaggcgca accggccaag gtttttgcct tcccgtcgcg
      901 accagcgact ccggtcgccg cttccgcggc cgctccggaa gccgaagcgg acccggacag
      961 cccgacggac gacgaggacg acggcgacac gctcgagctt tcggaggaat tcagcgagga
     1021 cgatggcgaa gaactggtgc tcgaaagcga cgacatcctc accacgccgg tcggagcgcc
     1081 gccaattgct ccgccgtcgg acgacgagga ggccggaccg gcggaagctg cagcggagca
     1141 accgaaggaa gagccgaagg ctgcggccgg caccggaggg accctgttcg agcgcatgca
     1201 gaacatggct cgcggcaagg cacagctggg cgatgacccg ccggcgtccg atttcggcag
     1261 cgaaccgatg gacattccgc gcttcctgaa ccggcaaaac aaccagtaag ccgctccaaa
     1321 tggggcagtt ctgccccgct caccgccgca gctgcacggc tcgtcgttaa ggggctaggc
     1381 agaaaggttc cggcaagatt ctctgccgca cggggatcga atggcggtgg gaattgctat
     1441 gaaacgcgtg cgcgtcgcgg cgcttctcct ttcgggcgtc gtcctggcga tcggtacgat
     1501 gtcgtcggcg gccttcgggc aggccgtccc gatttatgcg gaaagtgcgg gcgacgcgct
     1561 tgcccgcaac gtccgcacac tggccgagag cccccgcgac ttcaacgcgc tcgtcgcagc
     1621 cggcaaggcg gcgctccagc tgggagacgc gcaggctgcc gccggcttct tcggccgcgc
     1681 cgaggaaatc aacccaaaca gcccgcttcc ccaggtcggc atgggcgcgg cgctcgtcgc
     1741 gaccggcgat cccaatggcg cgctcagata tttcgcgagg gcgcagcagc tcggggcaac
     1801 tcccgcgacg atcggctgcg atcgcggcct tgcctacgac ctgcttggca accaggtggc
     1861 cgcgcagacc gactatcgcg ccgccctcaa cggcgccgac cgcgacgaag cgcgccgccg
     1921 ccttgcgctc agcctcgcga tcagcggcga caaggcgctc gcaacctcga ccctgcagcc
     1981 cctcctgcag cggcgcgatt tgggtgccca gcgcgtacgg gcgcttgtcc ttgcgctcga
     2041 cggcgacgtg gcaggagcga agtcggcact cgatttgacc atgcccggcg catcggcgcg
     2101 aatgggcccg ttcttccgcc agcttccggc gctttcgagc gtccagaaag cggctgccgt
     2161 ccacctcggg atcttcccgg aaaacggcct tgccgtcgct tcgatctcac cgggcgagga
     2221 caggctcgcg tcggtcgagc aattgcttcg ctcgcagccg gagcaggttg cggccattcc
     2281 gaccagctac accttgccgg cccctgccgc tcgccagcgg ccgccgctga ggactgcctc
     2341 catccctgac cgtcgcgccg tcaaggccgc cgcttcgccc aacaacaacc ttatccagac
     2401 gaagaaggtc gccggcgacg gcggaagccg gatctggctt caattggcaa gcggcgacaa
     2461 cgcgcacgcc ttgccgggcg aattccgcaa gatccgctcg cgcaacccgt cgctgttcac
     2521 cgggctcaac ggcttcgtcg ctcagaccga cagtcgcgct cggctgttga tcggcccttt
     2581 ccacagccag cgcgacgcgc ggctgttttc cgacgcgctg tccagcgaaa gcatccgatc
     2641 cttcacctgg acgagccatc cgggacaggt ggtcagggag ctcccgaact aatagagccg
     2701 ccgcaatgac ggtgcttgcc acgcttgccg cccggccggg ttcgtcccgg ggccgcctcc
     2761 accgggaaag cgacagcggc ccgcgcggcc cccgcgacat tttccagcga gaccgcgacc
     2821 ggatcatcca ctcggtcgcc ttccgccgcc tccgccacaa gacgcaggta ttcgtcgccc
     2881 ccgacggcga ccattaccgg gttcgcctga cccacagcct cgaagtcgcg cagatcggcc
     2941 ggaccatcgc ccgagccctc ggcctcaacg aggacctgac cgagatgctg tgcctcgccc
     3001 acgatctcgg ccacccgccg ttcggtcacg ccggggagga tgcgctcgag gaggcgatgg
     3061 cggattcggg cgggttcgac cacaacggcc acaccgtccg catcgtgacc aagctggaga
     3121 cgccctacgc cggcttcgac gggctcaacc tcagctggga agctctcgag ggtctggcaa
     3181 aacacaacgg gccggtgagg gagccgggat gggcgctggc ggcggcggat gccgagttcg
     3241 acctggcact ggatagctgg ccgtcgctag aggctcaggt ggcggcgatt gcggacgatc
     3301 ttgcgtacga caatcacgac atcgacgacg gcctccgcgc cggacttctc gatttcgacg
     3361 cgctcctcga ggtgccgctg gttgagtgcc actggcgcga catcgtcaaa cgctcgggcg
     3421 agctgccagc cgacaagatg cagcgggcgc tggtccgcga catgattggc gcgatggtcg
     3481 gcgatgtgat c
//
LOCUS       DATAKH010000158        10998 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21962,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000158 DATAKH010000000
VERSION     DATAKH010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 10998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10998
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21962"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VHN55_06540"
     CDS             complement(<1..263)
                     /locus_tag="VHN55_06540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016747146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEX2803623.1"
                     /translation="MADLTDQIRSAPDLQTLDALRVSALGKSGSITTQLKSLGKMSPD
                     ERAAEAPKIHALREAVTEAIAARKAELENAELEKRLATERVDLS"
     gene            323..1234
                     /locus_tag="VHN55_06545"
     CDS             323..1234
                     /locus_tag="VHN55_06545"
                     /inference="COORDINATES: protein motif:HMM:NF039315.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HEX2803624.1"
                     /translation="MSGWPELTMEHDHETLALLHLVSQMLGKIRVAHAPWVNHGWHAT
                     LRPAASGLAILSTAASGGRSFTLALDLCRHGIALQVGDGATDLIPFAGKPVSQLHSEL
                     IELLDRHRLPSSFNGKPNEIADAIAFADDSEPRTYDPDSGRRLHQALERIVPVFERFR
                     AGFTGKASPVHFFWGSFDLAVTRFSGRPAPQHPGGIPGLPDRITREAYSQEVSSAGFW
                     ASGVTAAEPFFYSYAYPEPAGFREHELPAGRFESEWQEFTLPYDEVRMASDPEAVLML
                     FLQSSYAAAAELAHWDRAALERDPVAP"
     gene            complement(1231..2640)
                     /locus_tag="VHN55_06550"
     CDS             complement(1231..2640)
                     /locus_tag="VHN55_06550"
                     /inference="COORDINATES: protein motif:HMM:NF021382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain fatty acyl-CoA regulator family
                     protein"
                     /protein_id="HEX2803625.1"
                     /translation="MAGRKLFLGARLKRLRRERGLNQNAMAAQLGISASYLNHLERNQ
                     RPLTAGVLLRLAEVFDIDVKAFAVEGAESAGPDQLAEIFSDPMLAGLGILRSELVELS
                     DNAPTVADGIVRLYTAIRELQRQPADPTASDPRVLITPETWVRDYIQAQRNHFPELEE
                     QAETVGGALGDPLSVGEALRRRLKEAWGVEARVADPEQLDDVSQHYDAERRTFMLSAL
                     LRPENRTFGLAYQLALLEFAPLIDRMVDSARPPDLGSRRLLHMSFANYAAGAIMMPYG
                     RFLRAAEEHRYALDRLCGQFGANVEQIAHRITTLGRSGARGVPFFMLRVDPAGNISKR
                     YAGESFPFSHFGGTCPRWHLHTAFQTPGQTIRQLIETPDGQRFFTISRTIERPIRPDL
                     RDDALLAIGLGCDVRYAPRIAYADGLDLMNTPATPVGPACAICPRIGCAYRATAPAGR
                     MLAVEENRKTISPYPFVTG"
     gene            2735..4039
                     /gene="aceA"
                     /locus_tag="VHN55_06555"
     CDS             2735..4039
                     /gene="aceA"
                     /locus_tag="VHN55_06555"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004451 - isocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HEX2803626.1"
                     /translation="MLLSQGGAHMVDFSELVPAPSGRFDGIERPYSVDEVRKLRGSIP
                     IEHTLARRGALRLWELLKSDEPVRALGAVTGNQAMQMVRAGLKAIYLSGWQAAADANT
                     ACSMYPDQSLYPANTGPELAKRINRALQRADQVEHSEGGAKRDWFAPIVADAEAGFGG
                     PLNCFEIMKAYIEAGVAGVHFEDQLASEKKCGHLGGKVLIPTQAAIRNLDAARLAADI
                     SGVPTILVARTDAESARLLTSDVDERDAPFITGERTAEGFYRLREGSGLDNCISRAKA
                     FASHADLLWFETSKPNLEQARRFAEAVYAQFPGKMLAYNCSPSFNWEANLDRATIAKY
                     QAELGAMGYRFQFVTLAGFHSLNHSMFELASGYRDRGMAAYSELQQAEFASEASGYTA
                     TRHQREVGTGYFDAVATAISGGQSSTVALKESTESAQFVAAE"
     gene            4052..4249
                     /locus_tag="VHN55_06560"
     CDS             4052..4249
                     /locus_tag="VHN55_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803627.1"
                     /translation="MGQRYWVVGGQYSDCRFSDLEPGTEKISGPFNDEVKARMEWQRL
                     TFRDHCGATERYSICVEPIRL"
     gene            4246..5814
                     /gene="aceB"
                     /locus_tag="VHN55_06565"
     CDS             4246..5814
                     /gene="aceB"
                     /locus_tag="VHN55_06565"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HEX2803628.1"
                     /translation="MNDVLAQARVIAEPSNVRGADQLLTTDALELVAELHERFDGRRQ
                     ALLDKRLDRQARFDAGELPDFREDTKSIRDDDWSVRPAPADLQDRRVEITGPTNAKML
                     INALNSGAKVFMADFEDATSPMWDELVQGQVNLRDHWLRRLDYTDPDSGKHYRIGEDP
                     AVLMVRPRGLHLPEDHVTVDGQPVAGAFFDFALYVWHNARRALSAGSGPYFYVPKLES
                     MEEAALWSDIFALAENRLRLERGTIKCTVLIETLPAAFEMDEILYSLKENIVGLNCGR
                     WDYIFSYIKRLGRSAERLTPDRSAMTMDKAFLAAYSLRLIATCHRRGAHAMGGMAAFI
                     PVKGDEQANATALDKVRQDKLREVHNGHDGTWVAHPALVPVAMEAFEAMDGPNQLSKM
                     PEHVPGREEMLELHTGPRTEAGARENIRVGVQYLAAWLGGKGAVPLYNLMEDAATAEI
                     SRAQLWQWLHFGAQLDDGRTFDRDLFDQLFDEEVGLLQDVEDIEEAAELFRDMIVSDG
                     FTEFLTLPAYERLG"
     gene            5869..6207
                     /locus_tag="VHN55_06570"
     CDS             5869..6207
                     /locus_tag="VHN55_06570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803629.1"
                     /translation="MDETQAAMCDRFGVECHPSYLHLKIGLALETLGQQPINGLRHPP
                     EKDTTGWYIWGGHELSSADDFFEPVHVSHLADILPAIIPYLGLPAGWRFQVTPGHEDV
                     WFDVSLLSTG"
     gene            complement(6282..6659)
                     /gene="rplT"
                     /locus_tag="VHN55_06575"
     CDS             complement(6282..6659)
                     /gene="rplT"
                     /locus_tag="VHN55_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEX2803630.1"
                     /translation="MPRIKRGVTTRAKHKRILEQAKGYYGRRKNTIRVARQAVEKAGQ
                     YAYRDRKVKKRSFRALWIQRINAAVRAEGLTYGEFIHALKLANIDLDRKVLADIAMNE
                     GDAFKGIIAQAKDAIEKKEKASV"
     gene            complement(6673..6876)
                     /gene="rpmI"
                     /locus_tag="VHN55_06580"
     CDS             complement(6673..6876)
                     /gene="rpmI"
                     /locus_tag="VHN55_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEX2803631.1"
                     /translation="MPKLKTKSGVKKRFKLTATGKIKHGVAGKRHRLISHNAKYIRQN
                     RGTEILADADTARVKLWAPYGLK"
     gene            complement(6992..7648)
                     /locus_tag="VHN55_06585"
     CDS             complement(6992..7648)
                     /locus_tag="VHN55_06585"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2803632.1"
                     /translation="MPTVLITGANRGLGLEFARQYSTDGWDVVATVRESSHELDSLGV
                     RVETLDMSDLAAVAAFGTRLQSLDQLVANAGTYGPRSVTSADDGEGWLETFAVNTVAP
                     FLLAQSVLPQVAASNGKLIAISTRMGSIEDNTSGGYIAYRSSKSALNSAWRSLAIDNR
                     GKAVCAVLHPGWVQTRMGGASAPLEPEQSVEGLRKVIDGLGPGDSGRFFSYDGSEIPW
                     "
     gene            complement(7679..8254)
                     /locus_tag="VHN55_06590"
     CDS             complement(7679..8254)
                     /locus_tag="VHN55_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006974 - DNA damage response [Evidence
                     IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase family
                     protein"
                     /protein_id="HEX2803633.1"
                     /translation="MCNLYRIEKNPDAIRRLFAQVEIPLTFPEGAPNIEPADIHITDR
                     APVVRWSDDHAELVIRRWSWPSPHGSPLFNMRSDGRNFPKDRCLVPLDGFYEYTNPDD
                     PKQKRKDCWLFRPGEGQEFAIAGLLRTHPVVGEAFTLLTAPPGPDVEPLHNRQIVLLR
                     PDQWRPWLDGSAKSVEMLQPTPAGSLDVGAV"
     gene            complement(8256..9191)
                     /locus_tag="VHN55_06595"
     CDS             complement(8256..9191)
                     /locus_tag="VHN55_06595"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010542779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX2803634.1"
                     /translation="MKLLAGNSNLPLARSIADYLEMPLTEASVRRFADEEVFVEINEN
                     VRGEDVFVLQSTSYPANDNLMELLICIDALRRASAKRITAVIPYFGYARQDRKPGPRT
                     PISAKLVANLITVAGASRVLTMDLHAGQIQGFFDIPTDNLFASPVIAADIRARFKTDN
                     LTMVSPDVGGVVRARSLAKRLNNAPLAIVDKRRERAGESEVMNIIGDVDGRTCILIDD
                     IVDSAGTLCNAAAALKQQGAVEVFAYSTHGVLSGGAAARVEASELKEVVVTDSIWSGE
                     ADPKGGKIRRLTVAPLLAEAIRRIADEASVSSLFD"
     gene            9295..10941
                     /locus_tag="VHN55_06600"
     CDS             9295..10941
                     /locus_tag="VHN55_06600"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013834375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEX2803635.1"
                     /translation="MTDRLTIALAQMNQRVGDLDANAEAMLAMREKAAGADLILYPEL
                     QVTGYPPEDLILKPEFVRRTMEVTDRLVRATSEPGPAMLIGTALAEEGATYNAVILAN
                     EGRVIARTLKRELPNYGTFDEKRIFSPGPLPEPIEFKGVKIGVPICEDIWQEVVCGHL
                     AEAGAEILLVPNGSPYELDKDDLRQSLVRSRCAMTGLPIAYVNRVGGQDEIVFDGSSF
                     VMHPDGEVVVQMPDWEEAVLLTEWTRGANGWRCDTRDLHRLDPYPEDIYHAMMVGLAD
                     YVGRNGFPGVILGLSGGIDSALSAAIAVDALGPDKVWGVMMPSRYTSEASLEDARGNA
                     ELLGCRHDVIPIIPAVQVFGEMLPDLEGVAAENIQARLRMVTLMALSNAEGQMLLTTG
                     NKSEMSVGYATLYGDMAGGYSVLKDAYKTTVFALSEWRNADKPEGALGPDGPVMPKRI
                     ITKPPSAELRPDQTDQDSLPPYDVLDPILEGLVDKEMSVKEIALATGADTSLVADIER
                     MLLRAEYKRRQAPPGVKIGTRNFGRDRRYPITNFFHTGPK"
BASE COUNT         1869 a         3544 c         3660 g         1925 t
ORIGIN      
        1 gacaggtcga cccgctcggt ggcgaggcgt ttctccagct ccgcgttctc gagctccgcc
       61 ttgcgcgccg caattgcctc ggtgaccgcc tcgcgaagcg catggatctt cggcgcctct
      121 gcggcgcgct catccgggct cattttgccc agcgacttga gctgggtcgt gatgcttccc
      181 gacttgccga gcgccgacac gcgcaatgcg tcgagcgtct ggaggtcggg cgcggagcgg
      241 atctggtcgg tgaggtcggc catggcgcgg gccttatcct tgctgccgcg caaaatgcaa
      301 agccgtgtga taggggcggg caatgagcgg ctggcccgag ctgacgatgg agcacgacca
      361 cgagacgttg gcgctgcttc atctcgtctc gcaaatgctc ggcaagatca gggtcgccca
      421 tgcgccgtgg gtgaaccacg gctggcacgc gactcttcgg cccgccgcga gcgggctggc
      481 catcttatcg acggcggcca gcggcgggcg gagcttcacg ctggcgctcg atctttgccg
      541 ccacggaatt gcgcttcagg tcggcgacgg cgcgaccgac ttgatcccgt tcgccggcaa
      601 gccagtgtcg cagctccact ccgaactcat cgagcttctc gaccggcatc ggcttccatc
      661 gagcttcaac ggcaagccca acgagattgc cgatgcgatt gcctttgccg atgacagcga
      721 gccgcgaacc tacgaccccg acagcggccg ccggctccac caggcgctcg aaaggatcgt
      781 gccggttttc gaacgattcc gcgccggctt caccggcaag gccagcccgg tgcatttctt
      841 ctggggaagc ttcgacctgg cggtgacgcg cttctcgggc cggccagcac cgcagcaccc
      901 gggtggcatt cccgggcttc ccgacaggat cacccgcgaa gcctacagcc aagaggtgtc
      961 gagtgccggc ttctgggcaa gcggcgtgac ggcggcagag ccgttcttct acagttatgc
     1021 ctatccagag ccggccggct tccgcgagca cgagttgccg gccgggcgct tcgagtcgga
     1081 atggcaggaa ttcacgcttc cctacgacga ggtccggatg gcgagcgacc cggaagcggt
     1141 gctaatgcta tttctccagt cgtcctatgc cgccgcagcc gagctggctc actgggaccg
     1201 cgccgcgctc gagcgggatc cggtcgcgcc ctaaccggtt acgaacgggt agggcgagat
     1261 cgtctttcgg ttctcctcga ccgccagcat ccgcccggct ggcgccgtcg cgcgataggc
     1321 gcaaccgatt cgcggacaga tcgcgcaggc ggggccgacc ggggtcgccg gcgtgttcat
     1381 caggtcgagc ccgtcggcat aagcgatccg cggcgcatag cgcacatcgc aaccgagccc
     1441 gattgcgagc aaggcgtcgt cgcgcagatc ggggcggatc ggccgctcga tggttcggct
     1501 gatggtgaag aagcgctggc cgtcgggagt ctcgatcagc tgccggatcg tctgcccggg
     1561 cgtctggaag gcggtgtgga gatgccagcg cgggcaggtg ccgccgaagt gggagaaagg
     1621 aaagctttcg ccggcatagc gcttggagat attcccggcc ggatcgaccc ggagcatgaa
     1681 gaagggtact ccgcgcgccc cggaacggcc gagcgtggtg atccggtgcg cgatttgctc
     1741 gacattggcg ccaaactggc cgcacagccg gtcgagcgcg taccgatgtt cctcagccgc
     1801 tcggaggaac cgtccgtagg gcatcatgat cgcaccggcc gcgtaattgg cgaagctcat
     1861 atgcaggagg cgacggctgc cgagatcggg cgggcgggcg ctgtcgacca tccggtcgat
     1921 cagcggcgca aactccagga gcgcgagctg gtaggcgagg ccgaacgtcc ggttttcggg
     1981 ccttagcaag gccgagagca tgaaggtccg ccgctcggcg tcataatgct ggctgacgtc
     2041 gtcgagctgc tcggggtcgg ccacccgcgc ctcgaccccc cacgcctcct tcagccgacg
     2101 ccgaagcgcc tcgccgaccg acagcgggtc gccgagcgcc ccgcccaccg tctccgcctg
     2161 ctcctcgagc tccgggaagt ggttgcgctg tgcctgaata tagtcgcgca cccaggtctc
     2221 gggggtaatc aggacccgcg ggtcggacgc ggtcgggtcg gcgggctggc gctggagctc
     2281 acggatcgcg gtgtagaggc ggacgatgcc gtcggcgacg gtcggggcat tgtccgacag
     2341 ctcgacgagc tccgaccgca gaatcccgag gcccgcgagc atcgggtcgg agaagatttc
     2401 cgcaagttgg tcgggacccg ccgattcggc gccttcgacg gcgaacgctt tcacgtcgat
     2461 gtcgaacact tccgcaagcc ggaggagcac ccccgcggtc agtggccgct ggttgcgttc
     2521 gagatggttg agataggagg ccgaaatccc gagctgggcg gccatcgcat tctggttgag
     2581 gccgcgctcg cggcgaagcc gcttcagtcg tgccccgagg aacagcttgc ggccggccat
     2641 ttgtagagtt gtgaagaaat ttacagcgtt tgcaagtgag ccgctgacac atttgcgttt
     2701 ttctgtgcat cttttttcaa aagaatgcgg tttgatgctg ctcagccaag gaggcgcgca
     2761 catggtcgat ttcagcgaac tggtaccggc accgagcggg aggttcgatg gcatcgagcg
     2821 gccctattcg gtcgacgagg tgcgcaagct tcgcgggtcg atcccgatcg agcacacgct
     2881 cgcccgccgc ggcgcgcttc gcctttggga attgctgaaa tcggacgagc cggtgcgcgc
     2941 gcttggcgcg gtcaccggca accaggcgat gcagatggtc cgcgccggcc tgaaggcgat
     3001 ctatttgtcc ggctggcagg ccgccgccga cgccaacacc gcctgctcga tgtatcccga
     3061 ccagtcgctt tatccggcca acaccggccc cgagctcgcc aagcggatca accgcgccct
     3121 ccagcgcgcc gaccaggtcg agcattcgga aggtggagcc aagcgcgact ggttcgcccc
     3181 gatcgtcgcc gacgcggagg ccggctttgg cgggcccttg aactgcttcg agatcatgaa
     3241 ggcctatatc gaggcgggag tcgccggcgt tcacttcgag gaccaactcg ccagcgaaaa
     3301 gaagtgcggt cacctcggcg gtaaggtgtt gatcccgaca caggcggcga tccgcaatct
     3361 cgacgccgcg cggctggcgg cggacatctc cggagtgccg acgatcctcg tcgcccgcac
     3421 cgacgccgaa agcgccaggc tgctgacttc agacgtggac gagcgcgatg ctccgttcat
     3481 caccggcgag cggaccgccg agggtttcta ccgcctccgc gaaggaagcg gcctcgacaa
     3541 ttgcatttcc cgggcgaaag ccttcgcgtc gcacgcggac ctgctgtggt tcgagaccag
     3601 caagcccaac ctcgaacagg cgcggcgctt cgctgaagct gtctacgcgc aattccccgg
     3661 caagatgctc gcttacaatt gcagccccag cttcaactgg gaggccaacc tcgaccgcgc
     3721 caccatcgcc aagtaccagg ccgagctcgg cgcaatgggg tacaggttcc agttcgtcac
     3781 gctggccggc ttccacagtc tcaaccattc gatgttcgag ctcgccagcg gctaccgcga
     3841 ccgcgggatg gcggcttatt ccgagctcca gcaggccgag ttcgcttccg aggcgtcggg
     3901 ctacacggca acccgccacc agcgcgaagt gggcaccggc tatttcgacg cggtcgcgac
     3961 tgcaatctcc ggcggccagt cgtcgaccgt cgcgctcaag gaatccacgg aatccgcgca
     4021 attcgttgca gccgagtaga ggagaaggaa gatgggacag cgttactggg tcgtcggggg
     4081 ccaatattcc gactgccgct tcagcgacct cgagccgggc accgagaaaa tcagcggccc
     4141 cttcaacgac gaggtgaaag cgcgcatgga gtggcagcgc ctgaccttcc gcgaccattg
     4201 cggtgcgacg gagcgctatt cgatctgcgt ggagccgatt cgcctatgaa cgatgttctc
     4261 gcccaggcgc gagtgattgc agaaccttcg aacgtccgcg gcgccgacca gctgctgacc
     4321 accgacgcgc tggaattggt ggcggagctt cacgagcgct tcgacgggcg ccgccaggcg
     4381 cttctcgaca agcggctgga ccggcaggcg cggttcgatg ccggcgagct tcccgacttc
     4441 cgtgaggaca ctaaaagcat tcgcgatgac gactggtcgg tgcgcccggc acccgccgac
     4501 ctccaggacc ggcgcgtaga gatcaccggt cccaccaacg ccaagatgct gatcaatgcg
     4561 ctcaacagcg gcgccaaggt gttcatggcc gatttcgagg acgcgacctc gccgatgtgg
     4621 gacgagctgg tccaggggca ggtcaacctt cgcgaccatt ggctgcggcg gctcgactac
     4681 accgaccccg acagcggcaa gcattacagg atcggcgagg atccggcggt gctgatggtc
     4741 cgcccgcgcg gactccacct tcccgaggac catgtcaccg tcgacggcca gccggtcgcc
     4801 ggcgccttct tcgatttcgc gctctacgtc tggcacaatg cccgccgggc gctgtccgcc
     4861 ggctccgggc cctatttcta cgtccccaag ctcgagagca tggaggaagc ggcgctgtgg
     4921 agcgacatct tcgcgcttgc cgagaaccgg ctgcggctcg agcgggggac gatcaagtgc
     4981 acggtgctga tcgagacact tcccgccgcg ttcgagatgg acgagatact ctactcgctg
     5041 aaggagaata tcgtcggcct caactgcggc cgctgggact atatcttcag ctacatcaag
     5101 cgtcttggcc gttcggccga gcggcttact cccgaccgct cggccatgac gatggataag
     5161 gccttcctcg ccgcttactc gctgcgcctg atcgccacct gccaccgccg cggcgcccat
     5221 gcgatgggcg ggatggccgc gttcatcccg gtgaagggcg acgagcaggc caacgccacc
     5281 gcgctggaca aggtgcggca ggacaagctt cgcgaggtcc acaacggcca cgacggcacc
     5341 tgggtcgcac acccggcgct cgtgccggtg gcgatggaag cgttcgaggc gatggacggc
     5401 cccaaccagc tgtcgaagat gcccgagcac gtccccggcc gcgaggagat gctggagctt
     5461 cacaccgggc cgcgcactga ggccggagcc cgcgagaaca tccgcgtcgg cgtccaatat
     5521 ctcgccgcct ggctcggcgg caaaggggcg gtgccgctct acaatctgat ggaggacgct
     5581 gcgacggctg aaatcagccg ggcccagcta tggcagtggc tgcacttcgg ggcccagctg
     5641 gacgatggcc gcaccttcga tcgcgaccta ttcgaccaat tgttcgacga ggaagtcggc
     5701 ctcctgcagg acgtggagga tatcgaggag gcggccgagc tgttccgcga catgatcgtc
     5761 agcgacggct tcaccgagtt cctgacgttg ccggcttacg agcggttggg ctgagaagcc
     5821 gccacagctc cattgccgac acgcggaacc ctgcctagcc ttctagctat ggatgagacg
     5881 caggccgcaa tgtgtgaccg cttcggagtg gagtgtcacc cgagctatct ccatctcaag
     5941 atcggccttg ctctcgagac attgggacag caaccgatca atggccttcg acatccgcct
     6001 gaaaaggaca caacgggctg gtacatctgg ggagggcatg aactgtcttc tgcagacgat
     6061 tttttcgagc cggtgcatgt cagccatctg gccgacattt tgccagcgat aatcccatac
     6121 cttggactac ctgcaggttg gaggtttcag gtcacccccg gccacgaaga tgtttggttt
     6181 gacgtcagcc tgctaagcac aggctagcct cagcttcttc taaagcgaaa agggcgccgg
     6241 aatctcttcc gacgccctcg ttgtctggat agcgaggccg cttagacgct cgccttttcc
     6301 ttcttttcga tcgcgtcctt cgcctgggcg atgatgccct tgaaggcgtc gccctcgttc
     6361 atcgcgatgt cggccaggac cttgcggtcg aggtcgatgt tcgcgagctt gagcgcgtgg
     6421 atgaactcgc cgtaggtcag cccttcggcg cggacggcgg cgttgatccg ctgaatccac
     6481 aaggcgcgga agctgcgctt cttcaccttg cgatcgcgat aggcatactg gccggccttc
     6541 tcgaccgcct ggcgtgcgac acggatcgtg ttcttgcggc ggccgtaata acccttcgcc
     6601 tgctccagga tccgcttgtg cttggcgcgc gtggtcacgc cgcgtttgat gcgtggcata
     6661 tctcagcgct ccttacttga ggccgtaggg cgcccagagc ttcacgcgcg ccgtatcggc
     6721 gtcggcgagg atctctgtgc cgcggttctg gcggatgtac ttggcgttgt ggctgatcag
     6781 ccggtggcgc ttgcccgcca cgccgtgctt gatcttgccg gtggcggtga gcttgaagcg
     6841 cttcttgacg ccgctcttcg tcttgagctt gggcattttc gtctcctgac gttccgaacg
     6901 gccgcggcag cccttgatgg ccgggcgcgt tctgttgttc cagaggtctg gaagagcgcg
     6961 ggcctataga gcgccgcacg cttcaaggca actaccaggg aatctccgag ccgtcgtagc
     7021 tgaagaagcg gccggagtcg ccggggccaa gcccgtcaat gaccttgcgc aggccttcga
     7081 cgctctgctc cggttccagc ggggcggagg ctccgcccat ccgggtctga acccagccgg
     7141 gatggagaac cgcgcacacg gccttgccgc gattgtcgat ggccaggctc cgccacgccg
     7201 agttgagcgc cgacttcgac gagcgatagg cgatatagcc gcccgacgta ttgtcctcga
     7261 tgctgcccat gcgcgtgctg atcgcgatca gcttgccgtt cgaggcggcg acctgcggca
     7321 gaaccgattg cgcgagcagg aagggcgcga cggtgttgac cgcgaacgtc tccagccagc
     7381 cctcgccgtc gtccgcgctg gtcaccgacc tggggccata agtgccggcg ttggcgacga
     7441 gctggtcgag cgactgcagg cgcgtgccaa aggccgcaac tgccgcgagg tcgctcatat
     7501 cgagcgtctc tacgcggaca cccagcgaat cgagctcgtg gctgctctcg cggacggtgg
     7561 cgacgacgtc ccagccgtcg gtggaatatt ggcgcgcgaa ttcgaggccg aggccacggt
     7621 tagcgccggt gatcaggact gtcggcatgt cggggtaacg ctgcggcggc ggaaaaggtc
     7681 agacggcccc gacatcgagg ctgcccgcgg gggtcggctg caacatctcg accgacttgg
     7741 cgcttccgtc gagccacggc cgccactggt cggggcgaag cagcacgatc tggcgattgt
     7801 gaagtggctc cacgtccggc ccagggggcg cggtgagaag cgtgaaggct tcgccgacca
     7861 cggggtgcgt tcgaagcagc ccggcaatcg cgaactcctg tccctcgccc gggcggaaca
     7921 gccagcagtc cttgcgtttc tgcttcgggt cgtcgggatt ggtatattcg tagaagccgt
     7981 cgagcgggac gaggcagcga tctttcggga agttgcggcc gtcggagcgc atattgaaga
     8041 gcggtgagcc gtgaggacta ggccaggacc accggcggat caccagctcg gcatggtcat
     8101 cgctccaccg gaccaccggc gcgcggtcgg tgatgtggat atcggcgggc tcgatattgg
     8161 gcgcgccctc cggaaaggtc agcgggatct cgacttgcgc gaacaggcgc cggatcgcgt
     8221 cggggttctt ctcgatccgg tagaggttgc acacgtcagt cgaacaggct ggagacgctc
     8281 gcttcgtcgg ctatccggcg gatcgcctcg gcgaggagcg gggcgacggt caggcggcgg
     8341 attttgccgc ccttgggatc ggcctcgccg ctccagattg aatcggtgac caccacttcc
     8401 ttgagctcgg aggcttcgac ccgtgccgcg gcgccgccgg agaggacccc gtgggtgctg
     8461 taggcgaaga cctcgaccgc gccctgctgc ttgagcgcgg cggcggcgtt gcacagggtg
     8521 ccggccgaat cgacgatatc gtcgatcagg atgcaggtgc ggccgtcgac gtcgccgatg
     8581 atgttcatca cttccgattc gccggcacgc tcgcggcgct tgtcgacgat tgcgagaggc
     8641 gcgttgttga gccgcttggc gaggctcctg gcgcgaacca cgccgccgac gtcgggcgac
     8701 accatggtca aattgtcggt cttgaagcgc gcgcggatgt cggccgcgat caccggcgag
     8761 gcgaagaggt tgtccgtggg gatgtcgaag aagccttgga tctgccctgc gtgcaggtcc
     8821 atcgtcagca cgcggctggc ccccgcgacg gtgatgagat tggcgaccag cttcgccgag
     8881 atcggagtgc gcggcccggg tttgcgatcc tgccgggcat agccgaaata agggatgacc
     8941 gcggtgatcc ttttggccga cgcgcggcga agcgcgtcga tgcagatcag cagctccatc
     9001 agattgtcgt tggccggata gctcgtcgac tggaggacga acacgtcctc gccgcgcacg
     9061 ttctcgttga tctcgacgaa cacttcctcg tcggcgaagc ggcggacgct cgcctcggtc
     9121 agcggcatct cgagatagtc ggcgatcgag cgggccagcg gcaggttgct gttcccggcg
     9181 agcagtttca tcggcgttcg gctccccagc ggcggtgccg gctgccttag ccacgccggg
     9241 gcggcgaagc aaagccttgg ttgcgggaac gccctcgtgc gttaaagcgc cggcatgacc
     9301 gacaggctga ccattgccct ggcccagatg aaccagcggg tcggcgatct cgatgccaac
     9361 gccgaggcga tgctggcgat gcgcgaaaag gccgccggcg ccgacctgat tctctatccc
     9421 gagctccagg tcaccggcta tccgcccgaa gacctgatcc tgaagcccga attcgtccgg
     9481 cggacgatgg aggtgaccga ccggctggtc cgcgccacat cggagccggg cccggcgatg
     9541 ctgatcggaa ccgcgctcgc cgaggaaggc gcgacctaca atgctgtgat cctcgccaat
     9601 gaggggcgag tgatcgcccg gactctgaag cgcgagctcc ccaactacgg caccttcgac
     9661 gaaaagcgca tcttctctcc gggcccgctt cccgagccga tagagttcaa gggcgtgaag
     9721 atcggcgtgc cgatctgcga agacatctgg caggaggtag tctgcggcca tctcgccgaa
     9781 gccggcgcgg aaatcctgct ggtccccaac ggcagcccct acgagctcga caaggacgat
     9841 cttcggcaat cgctggtccg ttcgcggtgc gcgatgacgg gcctaccgat tgcctacgtc
     9901 aaccgcgtcg gcggccagga cgagattgtc ttcgacggct cctcattcgt gatgcatccg
     9961 gacggcgagg tcgtcgtgca gatgccggat tgggaggagg cggtgctcct gaccgagtgg
    10021 accaggggcg ccaacgggtg gcggtgcgat acgcgcgatc ttcaccgcct cgatccctat
    10081 ccggaggaca tctatcacgc gatgatggtc gggctcgccg actatgtcgg ccgcaacggc
    10141 ttccccggtg tcatcctcgg cctttcgggc gggatcgaca gcgctctttc ggcggcgatc
    10201 gcggtcgatg cgctcgggcc cgacaaggtg tggggcgtga tgatgccctc cagatatacc
    10261 agcgaggcga gcctcgagga cgcgcgcggc aacgccgaac tgctcggctg ccgccatgac
    10321 gtcatcccga ttatcccggc ggtccaggta tttggcgaga tgcttccgga cctcgagggc
    10381 gtggccgccg agaatatcca ggcccggctg cggatggtca ccttgatggc gctgtcgaac
    10441 gccgagggac agatgctgct caccaccggc aacaagagcg aaatgagcgt cggctatgcg
    10501 acgctctacg gcgacatggc cggcggctat tcggtgctca aggatgccta caagacgact
    10561 gttttcgcgc tgtccgaatg gcgcaacgcc gacaagccgg agggtgcgct cgggcccgac
    10621 ggcccagtga tgccgaagcg gatcatcacc aagccgccgt cggccgagct tcgccccgac
    10681 cagaccgacc aggactcgct tccgccctac gacgtcctcg atccgattct cgaaggtctg
    10741 gtcgacaagg agatgtcggt gaaggagatt gcactcgcta ccggcgccga tacctccctg
    10801 gtcgccgaca tcgagcggat gcttcttcgc gccgagtaca agcggcggca ggcgccgccg
    10861 ggggtcaaga tcggcacccg caacttcggc cgcgaccgtc gctatccgat caccaacttt
    10921 ttccacacgg gtccgaagtg aacgtcgtca cccgtttcgc gccgtcgccg accggccggc
    10981 tgcacgtcgg caatatcc
//
LOCUS       DATAKH010000159         6774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_38177,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000159 DATAKH010000000
VERSION     DATAKH010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6774
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38177"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1867
                     /locus_tag="VHN55_06605"
     CDS             <1..1867
                     /locus_tag="VHN55_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2803636.1"
                     /translation="ADAAEDKGEKEGKKESALKQFTVDLNEKAKAGKVDPLIGRMPEV
                     DRTVQILCRRSKNNPLYVGDPGVGKTAIAEGLARKIVEGDVPDVLKGAVIYALDMGAL
                     LAGTRYRGDFEERLKSVVNELEKLPEAILFIDEIHTVIGAGATSGGAMDASNLLKPAL
                     SSGSIRCIGSTTYKEFRNHFEKDRALLRRFQKIDVNEPTIEDTIKILAGLRSSFEQHH
                     SVRYTPDAVKSAVELSARYIHDRKLPDKAIDVIDEVGAMQMLVPPSRRKKVITPKEIE
                     AVVATMARIPPKSVSSDDKRVLENLDADLKRVVFGQDIAIEKLASAMKLSRAGLRDPD
                     KPIGNYLFSGPTGVGKTEVARQLASIMGIPLQRFDMSEYMERHAVSRLIGAPPGYVGY
                     DQGGLLTDAVDQHPHSVLLLDEIEKAHPDLFNILLQVMDHGKLTDHHGKTVDFRNTIL
                     IMTTNAGAADMARESIGFGQATREDAQEDAVKKMFTPEFRNRLDAIVPFAYLPPAVVA
                     RVVDKFILQLELQLADRNVHIQLDDEARKWIVDKGYDKLYGARPMGRLVQEKIKQPLA
                     EELLFGKLVNGGEVKVHIKDNAPAFEIAPAAPKAKPKKRKAQAKKKASGDAPPAE"
     gene            2024..3736
                     /locus_tag="VHN55_06610"
     CDS             2024..3736
                     /locus_tag="VHN55_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019830946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HEX2803637.1"
                     /translation="MKPTSFRLLAATAIILAAVPASAQDMGPFDPARLSEIDRAISTD
                     AFEGRGPATRAEAKTVDFITRHFQEAGIQPAGDMVNGVRQWTQKVPLLKSAWVAAPAL
                     SVALDGKPVALTQGEEIVVRSPMNGTSRLDLDSAPLVFAGYGVKAPERGWDDFKGQDM
                     RGKILVVLVNDPDFEGGEGDFGGKAMTYYGRWTYKYEEGARQGAAGVLVIHETAPASY
                     GWATVKNSNTNEMFDIVRDNPAAAHPGVEGWIQKDLAQRIFAASGLDFDAMKAAARKK
                     DFKPVALNATLSLDGTAKAEVITSHNVVGYLPGAKYPDETVIYTAHWDHLGIGKPDET
                     GDAIYNGAFDNGTGIAQLIEQARVFAKEPRTDRSIVFLAVGAEEKGLLGSEYYAQNPL
                     FAPGKTAGVINTDGGAIYGPSKNFTISGNAKLGLLDMLIAEGKEQGRYYSPDPHPEAG
                     YFFRSDHFSFAKIGVPAISFGEGNDLVNGGIERGEALVREYVEKHYHQPSDEWSADWD
                     FSGMAEDANLLHKLGRNLANSRAWPNWGAESEFRAARDRTAAERGESAAPAPAPQPPK
                     GDRG"
     gene            3733..4245
                     /locus_tag="VHN55_06615"
     CDS             3733..4245
                     /locus_tag="VHN55_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEX2803638.1"
                     /translation="MSETLEPALPDDLDERAERLMHLVCDKDWKVATAESCTGGMLAT
                     LLTDIEGAGHGFDRGFVTYSKEAKAELLGIDRDLLDKNDAVSEPVARAMAEGAIERSS
                     ADVALGVTGFAGPAGDGCEEGLVHFAVARRGGPTRHRVEHFGKAGRGPVRIKAVRCML
                     EMLQESLDEG"
     gene            4289..4924
                     /locus_tag="VHN55_06620"
     CDS             4289..4924
                     /locus_tag="VHN55_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017669548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX2803639.1"
                     /translation="MAELTFYTNPQSRGRIIRWMLEELGEPYKAEVIPYDQIKSERYL
                     AVNPMGKVPAIKHDGHVVTECAAICAYLADVFPDAGLGPRTDEKADYYRWMFYAAGPV
                     EAAVSNKAAGWAPTPERERMFGYGNFDRVVAVLDEMFSRRDYVCGERFTAADVYVGSQ
                     IMFPMQFGMLPELDSFTRYRDRLQARDAYTRATSIDDELMAESQPAQPQPA"
     gene            4929..5789
                     /locus_tag="VHN55_06625"
     CDS             4929..5789
                     /locus_tag="VHN55_06625"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2803640.1"
                     /translation="MPDSERQQAIDLYDRFTHEGMDRRVFMGRMVAIAGSVAAAEALI
                     ASIAASPAAAAIVPADDPRLTTRTDTLAGGYKAYVAEPKTRSLKATVLVIHENRGLND
                     HIRDVARRAALAGYRAVAPDMLSQSGGTPADEDAARDAIGKLDLGEAVASGAAIVQQL
                     AGSSLGRKVGAVGFCWGGGFVNRLAVESGTALAAGVPFYGPAPDPSDAAKVMAPMQFH
                     LAGLDKRVAETAWPWISALASRDKLVEAFSYPAVNHAFHNDTSAERYDKTAATLAWER
                     TLAFFGRHLG"
     gene            complement(5799..6206)
                     /locus_tag="VHN55_06630"
     CDS             complement(5799..6206)
                     /locus_tag="VHN55_06630"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2803641.1"
                     /translation="MTAVPSERRSGPRVDDPELRGRRSEPRAYLLLPASAEAMSGRLR
                     VTVLDVSRTGARLEGENLPNVGKDVILRCGSLDTFGTVAWTSSGRCGLQFDEPIAPSE
                     LVTLRGLYAATKDSPFTPEEREAADDWLNGLAR"
     gene            complement(6311..>6774)
                     /locus_tag="VHN55_06635"
     CDS             complement(6311..>6774)
                     /locus_tag="VHN55_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007684070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX2803642.1"
                     /translation="MSTGTLQTLFWSFAVAMGLSMSTIFLVYTNMSIAQTFFAVAAGF
                     MGLSLYGYTTKRDLSGMGTFLIMGVVGLLIAMLINLFLQSTAMMMAISAIGVLLFAGL
                     TAYDTQKIKSMYAYVAGTDMMGKVVIMGALNLYLDFINMFMFLLSFMGDRR"
BASE COUNT         1300 a         2206 c         2225 g         1043 t
ORIGIN      
        1 cgccgacgcc gccgaggaca agggcgagaa agagggcaag aaggaaagtg ccctcaagca
       61 gttcaccgtc gacctcaacg agaaggcgaa agccggcaag gtcgacccgc tgatcggccg
      121 catgcccgaa gtcgaccgga cggtgcagat cctgtgtcgc cgctcgaaga acaatccgct
      181 ctacgtgggt gaccctggag tcggcaaaac cgcgatcgcg gaagggcttg cgcgcaaaat
      241 cgtcgagggc gacgttcccg acgtgctcaa gggcgcggtg atctatgcgc tcgacatggg
      301 cgcgctcctc gccggcaccc gctaccgcgg cgacttcgaa gagcgtctga aatcggtcgt
      361 caacgagctc gagaaactgc ccgaggcgat cctgttcatc gacgagatcc acacggtgat
      421 cggcgccggc gccacttcag gcggggcgat ggacgcgtcg aacctgttga agccggcgct
      481 ctcgtcgggc tcaatccgct gcatcgggtc gacgacctac aaggagttcc gtaaccattt
      541 cgagaaggac cgggcgcttc tccgccggtt ccagaagatc gacgtcaacg agccgaccat
      601 cgaggacacg atcaagatcc tcgccgggct tcgctcctcg ttcgagcagc accacagcgt
      661 ccgctacact cctgacgcgg tgaagagcgc ggtcgagttg tcggcgcgtt acatccacga
      721 ccgcaagctt ccggacaagg cgatcgacgt gatcgacgag gtcggggcga tgcaaatgct
      781 ggtgccgccg agccgccgca agaaggtgat cacgccaaag gagatcgagg cggtggtcgc
      841 gaccatggcg cgaatccctc cgaaatcggt gtcgagcgac gacaagcgcg ttctcgaaaa
      901 tctcgatgcg gacctcaagc gggtcgtgtt cggccaggac atcgccatcg agaagctggc
      961 gtcggcgatg aagctcagcc gcgccgggct acgcgatccc gacaagccga tcggcaatta
     1021 cctgttcagc ggcccgaccg gggtcggtaa gaccgaggtc gcgcgacagc tggcctcgat
     1081 catgggaatt ccgctgcagc ggttcgacat gtccgaatat atggagcgcc atgcggtcag
     1141 ccgcctgatc ggcgcgcctc cgggctatgt cggttacgac cagggcggac tcctgaccga
     1201 cgcggtcgac cagcatcccc acagcgttct cctgctcgac gagatcgaga aggcgcaccc
     1261 ggacctgttc aacatcctgt tgcaggtgat ggaccacggc aagctgaccg accaccacgg
     1321 caagacggtc gatttcagga acaccatcct cattatgacc accaatgccg gcgcagccga
     1381 catggcgcgc gagtctatcg gcttcggcca ggcgacccgc gaggacgcgc aggaggatgc
     1441 ggtcaagaag atgttcacgc ccgagttccg caaccggctc gatgcgatcg ttccgttcgc
     1501 ctacctgccg cctgcggtcg tcgcccgggt cgtcgacaag ttcatcctgc agctcgagct
     1561 tcagctggcc gaccgcaacg tgcacatcca actggacgac gaagcgcgca agtggatcgt
     1621 cgataagggc tacgacaagc tctacggcgc ccgtccgatg ggccggctcg tccaggagaa
     1681 gatcaagcag ccgctcgccg aagagctctt gttcggcaag ctggtgaacg gcggcgaggt
     1741 caaggtccat atcaaggaca atgcgcccgc cttcgagatc gcccctgccg cgcccaaggc
     1801 gaagccgaag aagcgcaagg cgcaggcgaa gaagaaggca agcggcgacg caccgccggc
     1861 ggaatagtct gcccggagga acacgaaggg ccgggagcga acccggcctt ttttcggccc
     1921 cgaccgggct ggccgcgcgg agcgccgccc attaacgtct gcagcgatca gccggcgggg
     1981 ccatgcgccc tgccgctggc ttggcgcgtt ctggggagag aaaatgaaac cgaccagctt
     2041 ccgactgctc gcagcgactg cgatcatcct tgccgcggtg ccggcatccg cgcaggacat
     2101 ggggccgttc gaccccgcgc gcctgtcgga aatcgacagg gcgatctcga cggacgcgtt
     2161 cgaaggacgc gggccggcga cccgagcgga agcaaagacc gtcgacttca tcacccggca
     2221 cttccaggaa gccggaatcc agcccgccgg cgacatggtc aacggggttc ggcagtggac
     2281 ccagaaggtg ccgcttctca agtccgcatg ggtcgccgct ccggctctct ccgtcgcgct
     2341 cgatggcaag cccgtcgcgc tgacgcaggg cgaggagatc gtcgttcgct cgccgatgaa
     2401 cgggaccagc cgcctcgatc tcgactccgc cccgctggtg ttcgccggct acggagtcaa
     2461 agcgcccgag cgcggctggg acgacttcaa gggccaggac atgcgcggca agatcctggt
     2521 cgtgcttgtc aacgatcccg acttcgaggg cggcgaaggc gatttcggcg gcaaggcgat
     2581 gacctattac ggccgctgga cgtacaaata tgaagaaggc gcccgccagg gcgcggcggg
     2641 cgttctcgtt atccacgaaa ctgcgccggc cagctacggc tgggcgacgg tgaagaattc
     2701 caacaccaac gagatgttcg acatcgtccg cgacaatcct gcggcggctc atccgggcgt
     2761 ggaagggtgg atccagaagg acctggcgca gcgaatcttc gccgcctccg ggctcgattt
     2821 cgacgcgatg aaggcggcgg cccggaagaa ggatttcaag cccgtcgcgc tcaacgcgac
     2881 gctgtcgctg gacgggaccg cgaaggcgga ggtcatcacc tcgcacaacg tcgtcggtta
     2941 cctgccggga gcaaaatatc ccgacgaaac ggtgatctac accgcccact gggaccatct
     3001 cggaattggc aagcccgacg agaccggcga cgcgatctac aatggcgcat tcgacaacgg
     3061 gacgggaatt gcccagctga tcgagcaggc gcgggttttc gcgaaggagc cgcggaccga
     3121 ccgctccatc gtcttcctcg ccgtcggggc cgaggagaag gggctgctcg ggtccgaata
     3181 ttacgcccag aacccgctct tcgcgccggg caagacggcc ggggtgatca acaccgacgg
     3241 cggcgcgatc tacgggccgt cgaagaactt caccatctcc ggcaatgcga aactcgggct
     3301 gctcgacatg ctcatcgcgg agggcaagga gcagggccgc tactacagcc ccgaccccca
     3361 tcccgaggcc ggatacttct tccgctccga ccatttctcc ttcgccaaga tcggcgttcc
     3421 tgcgatcagc ttcggggagg gcaacgacct ggtgaacggc gggatcgagc gcggcgaagc
     3481 cctcgtccgg gaatatgtcg agaagcatta ccaccagccg agcgacgaat ggtcggccga
     3541 ctgggacttc agcggaatgg cggaggacgc caaccttctc cacaagctgg ggcgcaatct
     3601 cgccaattcg cgcgcatggc ccaactgggg ggccgagagc gaattccggg ccgcgaggga
     3661 caggaccgcg gccgagcgcg gcgaatcggc cgcacccgcc ccggcgccgc agccgccgaa
     3721 aggcgaccgc gggtgagcga gacgctcgag cctgctcttc cggatgacct ggacgagcga
     3781 gccgagcggc tgatgcatct cgtctgcgac aaggactgga aggtcgccac cgctgagagc
     3841 tgcaccggcg ggatgcttgc gacgctcctg accgacatag agggcgccgg ccacggcttc
     3901 gaccgcgggt tcgtcactta ttcgaaggag gcgaaggccg agctgctggg gatcgaccgc
     3961 gacctcctcg acaagaacga cgcagtgtcg gaaccggtcg caagggcgat ggccgaaggc
     4021 gcgatcgagc ggtcgagcgc cgacgtggcg ctcggcgtta ccggctttgc cgggcccgct
     4081 ggcgacggat gcgaggaagg cctggtccac ttcgcggttg cgcggcgcgg cggaccgacc
     4141 cgccaccggg tcgaacattt cggcaaggcc ggccgcggac ccgtgcgaat caaggcggtc
     4201 cgctgtatgc tggagatgct ccaagagtcg ctcgacgagg gctgacgcgc tcgcgggcgg
     4261 cgggacaaat cgccgcagga gagcgtctat ggccgagctg actttctaca cgaacccgca
     4321 atcgcgggga cggattatcc gatggatgct cgaggagctc ggcgagcctt acaaggccga
     4381 ggtcatcccc tacgaccaga tcaagagcga gcgctatctg gccgtcaatc cgatgggcaa
     4441 ggtgcccgcg atcaagcatg acggccatgt cgtcaccgaa tgcgccgcca tttgcgccta
     4501 tctggcggac gttttccccg acgccggtct cggcccgcgc accgacgaga aggccgacta
     4561 ctaccgctgg atgttctatg cggccggtcc tgtcgaggcg gcggtttcga acaaggcggc
     4621 gggctgggcg ccgacccccg agcgcgagcg catgttcggc tacggcaatt tcgacagggt
     4681 cgtcgcggtt ctcgatgaga tgttctcccg tcgcgactac gtctgcggcg agcgattcac
     4741 cgccgccgac gtctatgtcg gatcgcagat catgttcccg atgcagttcg gcatgcttcc
     4801 cgagctcgac agcttcaccc gctatcgcga ccgcctgcag gcacgcgacg cgtacacgcg
     4861 ggcgacctcc atcgacgacg agctgatggc cgaaagccag cctgcccagc cgcagccggc
     4921 ctgatccgat gccggacagc gagcggcagc aggcgatcga cctctacgac cgcttcactc
     4981 acgagggcat ggaccgccgc gtcttcatgg gccggatggt cgcgattgcc ggaagcgtcg
     5041 ccgcggccga agcgctgatc gcgtcgatcg ccgcctcgcc cgccgccgcc gcgatcgttc
     5101 ccgccgacga tccccggctg accacgcgca ccgacaccct ggccggcggc tacaaggcct
     5161 atgtcgccga gccgaaaacc cgctcgctga aggcgacggt gctggtgatc cacgaaaacc
     5221 gcggcctgaa cgaccatatc cgcgacgtcg cccggcgggc tgcgctcgcc ggctatcgcg
     5281 cggttgcccc ggacatgctg tcgcaatcgg gagggacgcc cgcggacgag gatgcggcac
     5341 gcgatgcgat cggcaagctc gatctcggcg aggcggtcgc ctccggcgct gcgatcgtcc
     5401 aacaactcgc cggatcgagc ctgggacgga aagtcggcgc ggtcggcttc tgctggggcg
     5461 gcgggttcgt gaaccggctc gcggtcgaat ccggcacggc gcttgcggcg ggcgtgccct
     5521 tctacggccc ggcgcccgat ccgtcggacg ccgccaaggt catggcgccg atgcaattcc
     5581 acctcgcggg actggacaaa cgggtcgcag aaacggcgtg gccgtggatc tcagccctgg
     5641 cctcacgcga caagctggtc gaggctttca gctacccggc ggtcaatcac gctttccaca
     5701 acgacacgtc cgccgagcgc tacgacaaga ccgcagcgac ccttgcgtgg gagcgaacgc
     5761 tggccttttt cggccgtcac ctcggctgat tgtgcgccct agcgggcgag gccgttgagc
     5821 cagtcgtccg ccgcttcgcg ttcctcgggc gtgaagggcg aatctttcgt cgctgcgtaa
     5881 agtcctcgaa gggttacgag ctcggagggc gcgatcggct catcgaactg caatccgcag
     5941 cgcccggacg aagtccaggc gaccgttccg aatgtatcga ggctgccgca cctgagaatg
     6001 acgtccttgc cgacattggg aaggttttcc ccctccaacc gggcgccggt gcgcgaaacg
     6061 tcgagcaccg tgactcgaag gcggccgctc atcgcttctg cggaggcagg aagcagcaga
     6121 taggcgcgcg gctcggacct gcggccccgc agttcggggt cgtcgacgcg cggcccgctg
     6181 cggcgttctg aagggactgc tgtcatgcag ccagaatagg ccgttctggt taagaaccga
     6241 ttgcgcgccc cagcgacaaa aaaagggccg gagtttcctc cggccctcgt ctgttcggtt
     6301 ccgggcgccc ttagcggcgg tcgcccataa agctgagcag gaacatgaac atgttgatga
     6361 agtcgaggta gaggttcagc gcccccatga tcacgacttt gcccatcatg tcggttccgg
     6421 ccacataggc atacatgctc ttgatcttct gcgtgtcgta ggcggtgagc ccggcaaaca
     6481 gcagcacccc aatggcgctg atcgccatca tcattgccgt cgactggagg aacaggttga
     6541 tcagcatcgc gatcaacaga ccgacgacgc ccatgatcag gaacgtcccc attccgctca
     6601 agtcgcgctt ggtcgtgtag ccgtagaggc tgagacccat gaaaccggcg gcgaccgcga
     6661 agaaagtctg ggcgatcgac atgttggtat agaccaggaa gatggtcgac atcgacaggc
     6721 ccatggcgac cgcgaacgac cagaacaaag tctggagggt gcccgtcgac atgc
//
LOCUS       DATAKH010000160         9525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_21966,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000160 DATAKH010000000
VERSION     DATAKH010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9525
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21966"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1262
                     /locus_tag="VHN55_06640"
     CDS             <1..1262
                     /locus_tag="VHN55_06640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015456978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2803643.1"
                     /translation="VRPVGQLADAAGRIEEGDFSVRVPITNSEDEISTLAHAFNRMTA
                     RIDEQTGALRSANAQLDTRRAFIEAVLSSVTAGVIALDSSNRILLINKSAEALLQQRG
                     EAVEGTALGALSPELDEFIRGEEHDANVDVEVGGGRRTLAVKRVRYQDGAVLTFDDIT
                     DQLSDQRNAAWSDIARRIAHEIKNPLTPIQLAAERLQRRFGSEIASDAETFERLTGTI
                     VRQVGDLRRMVDEFSNFARMPKPVFRTENVHEIARQSLFLHEVAHPEIKFALDPTNGD
                     FPMTCDRRQLGQALTNVVKNAVEAIETRRSRGEHHLGGDRVELHLRRDDDQLVVDVTD
                     TGIGLPDDRKRLTEPYMTTRVRGTGLGLAIVKKIVEEHCGEIAFLDRKGGGTHVRIAF
                     DVDRLAQMERDHSGSEPGDGSEDGTYI"
     gene            1275..2654
                     /locus_tag="VHN55_06645"
     CDS             1275..2654
                     /locus_tag="VHN55_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014500384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX2803644.1"
                     /translation="MALEVLVVDDEEDIRDLVSGVLQDEGYSVRSAADSSSALDAMKD
                     RRPSLVLLDVWLQGSRLDGLQLLQEIKRNDPSLPVLMISGHGNLDTAVAAVREGAVDF
                     IEKPFEAGHLLHLVSRATETDRLRRENESLRQQIVHDAVLSGNSVAINTVRATLKRVA
                     PTGSRVLITGPAGVGKEVAARTIHQWSTRANGPFVVVSAAMMHPERVEEELFGVDSDE
                     GSRPGLLEQAHGGTLFLDEIADMPLTTQGKILRVLTDQSYHRVGGQRPVKVDVRVLSA
                     TSRDLAQEIADGRFREDLFYRLNVVPVRLPPLRERREDIPELANHFLARFAAERRIPT
                     PQLSEEAAAALQSHEWPGNVRQLRNIIERTIILAPLERVERIEADMLPAEILESEGSP
                     GLSTPAMTIMGSPLREARESFEREYLKIQIRRFSGNISRTASFIGMERSALHRKLKAL
                     GIGDKRDAE"
     gene            2669..3154
                     /gene="hfq"
                     /locus_tag="VHN55_06650"
     CDS             2669..3154
                     /gene="hfq"
                     /locus_tag="VHN55_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015456980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEX2803645.1"
                     /translation="MAGKPASLQDRFLNSARKSKAPVTLFLLKGVKLQGVITWFDPYS
                     LLLRRDGQSQLVYKHSVSTVMPTRSLDLGEMNPPETSMIAALQDTFLSAAAREHQRMT
                     VFLVNGVMLQGEVSVHDQFCLLLERAGQVQLVYKHAISTIQPEDALSLGGTPSDEPAD
                     E"
     gene            3151..4461
                     /gene="hflX"
                     /locus_tag="VHN55_06655"
     CDS             3151..4461
                     /gene="hflX"
                     /locus_tag="VHN55_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX2803646.1"
                     /translation="MTVTIGSGSGAFDVTRGERALVVGIDRAGKGDGRSSEARLEEAV
                     GLAEAIGIDVVGRRTFRLRSPKPATLLGKGQIEELAAAARDHDAGLLVVDAPLAPVQQ
                     KSLEEQVGTKVIDRTSLILEIFGERAATAEGRLQVELAHLDYQAGRLVRSWTHLERQR
                     GGFGFLGGPGETQIEADRRLIRDRMARIRRELEQVKRTRSLHRERRQRAPWPVIALVG
                     YTNAGKSTLFNRMTGGDVLAEDMLFATLDPTMRDVKLPGFDKAILSDTVGFVSDLPTE
                     LVAAFRATLEEVASADLLVHVRDIAHPDREAQREDVERVLAQLGVGAEEEGAPPKIEA
                     WNKVDLLAPQDREQVLAEAARRENVVPVSALTGIGIDALRERLAEALHSGAQLHSISL
                     PSSDGGKIAWLHSRGDVIDQQSHDSEIVLQVRLSPENWARFQSL"
     gene            complement(4449..5186)
                     /gene="mazG"
                     /locus_tag="VHN55_06660"
     CDS             complement(4449..5186)
                     /gene="mazG"
                     /locus_tag="VHN55_06660"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEX2803647.1"
                     /translation="MNLERLVAIMRRLRDPERGCEWDLKQSFRTIAPYTIEEAYEVAD
                     AIDRGDMEALEDELGDLQLQVVFHAQMAEELGHFTLDDVVGRICDKLERRHPHIFGDA
                     VESPGWDAIKAAERKQKTDESALAGVAVALPALDRALKLQRRAARTGFDWPDSFGPRV
                     KIDEELAELDRESDPERRADELGDLLFAVVNLARHLNVDPEEALRQANRKFERRFRAI
                     EAEPGFEAMSLDEKEALWSKAKAAQSD"
     gene            complement(5263..5844)
                     /locus_tag="VHN55_06665"
     CDS             complement(5263..5844)
                     /locus_tag="VHN55_06665"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX2803648.1"
                     /translation="MSDNAPYIVFYVLAAGFVATALIGRRIPLGSAAKMAIAWIGIFG
                     LAFILFAFRSELSDLGQRLRAEATGTAIVQGENVRIPIREDGHFWVEAQLNGRDVWFM
                     VDSGASVTTVSRSVARAAGMRIGSQKSIVNTANGRILVTQGRADRLQVGSIERTDFPV
                     DISDQDDVNLLGMNFLSSLSGWRVEGNYLVLAP"
     gene            complement(5841..6623)
                     /locus_tag="VHN55_06670"
     CDS             complement(5841..6623)
                     /locus_tag="VHN55_06670"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEX2803649.1"
                     /translation="MKLIDSHCHLNYEGLAERQDEVLANARDRGVAGFLNISTRQSEW
                     NDVIAVADSNADVWATVGVHPHEADAHPDLGSAALVEASKHPRVVAIGECGLDYYYDK
                     SDRAAQRERFQAHIDSARTSGLPLVVHTREAEADTAEMLSQAVKEGGVTGVLHCFTGS
                     ADLARKGLDLCFFVSLSGIVTFKNARDLQETAKWLPLDRMLVETDSPFLAPVPHRGKT
                     GEPAFVADTAAFVAELRGDEPDSLADATTANFFRLFAKAVQA"
     gene            complement(6620..8125)
                     /gene="metG"
                     /locus_tag="VHN55_06675"
     CDS             complement(6620..8125)
                     /gene="metG"
                     /locus_tag="VHN55_06675"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011445588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX2803650.1"
                     /translation="MGEPFYITTAINYPNGPPHIGHAYEAIAADVIARFQRAQGRDVR
                     FQTGTDEHGLKMAQAARAEEVEPRQFADKMSSLFQQMDERLNISYDRFIRTSEEAHHR
                     ASQAIWEAMAEKGDLYLGRYEGWYSVRDEAYYDEGELIDGEGEQKLSPQGSPVEWTVE
                     ESWFFRLSAYQAKLLDHYSANPDFIRPESRRNEVMRFVEGGLSDLSISRTSFDWGVKV
                     PGSDDHVMYVWLDALTNYLTGLGYPGETDLMKRYRPADVHLIGKDVVRFHAIYWPAFL
                     MSAGIALPKQVYGHGFLLSRGEKMSKSVGNVVDPMVLAERFGVDQLRYFLMREVPFGQ
                     DGSYSAEAIVNRVNAELANSFGNLAQRTLSMIYKNLDGVVPAPGEAQEDKALLAAVDN
                     AVTELSARFGDFAFSIGLEAWMGAVFACNAYVDAAAPWALRKTDPQRMADVLGTLVAA
                     IRKLAEAVIPVIPASAERLIRVIDDGLHGALEQPVPIFPRLELAQEEGEAA"
     gene            complement(8157..9131)
                     /locus_tag="VHN55_06680"
     CDS             complement(8157..9131)
                     /locus_tag="VHN55_06680"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEX2803651.1"
                     /translation="MIAGHDKAVEQFRRAWDSGALHHAWLLAGPRGVGKATFALDAAV
                     RLLAQAAGPPFDAPGLDTPQGHPIAKLIAAGSHPDMRWLQRLPREKGEGLARNISVKQ
                     VRELSELFDLSPALSNWRVAVIDSVDELEPSAANAVLKMLEEPPPNCVFFLVSHAPGR
                     LLPTIRSRCRRLEFHTLRSDAMASVLEAQLPQVAPAERERLIPLANGSVGRALAFASL
                     ELGPLETEAMAILRHGDPDNSKRSALASQLARKAAADRYSAFLDLLPSLVAKEARTLA
                     EPQRERALEAYSRVRELVAIAPRLSLDPAATVFQLGGILASVAEPRRS"
     gene            complement(9128..>9525)
                     /locus_tag="VHN55_06685"
     CDS             complement(9128..>9525)
                     /locus_tag="VHN55_06685"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006235 - dTTP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX2803652.1"
                     /translation="DHVEKTIRPALERGEWVISDRFVDSSFAYQGGAGGLGIERLREL
                     HDFACGGFMPDRTLVLTLSEGSERARARDGHPGDRIGGRSEDFHHKVELAFRIVAAAE
                     PDRMKLIDASGNKEEVTQRLVAAISDLLP"
BASE COUNT         1729 a         3077 c         3070 g         1649 t
ORIGIN      
        1 tcgtccgtcc ggtcggacag ctcgccgatg ccgccggccg gatcgaggag ggggatttct
       61 cggtgcgagt gccgatcacc aacagcgagg acgagatttc gacactcgcc catgccttca
      121 accggatgac ggcgcggatc gacgaacaga ccggagcgct ccgctccgcc aatgcacagc
      181 tcgacacccg gcgcgcgttc atcgaggcgg tgctgtccag cgtcaccgcc ggggtcatcg
      241 cgctcgattc gtccaaccgg atcctgctga tcaacaagtc ggccgaggcg cttttgcagc
      301 agcgcgggga agcggtagag ggaaccgcac ttggcgcctt gtcgccggag ctcgacgagt
      361 tcatccgcgg cgaggagcac gacgcgaacg tcgacgtgga agtcggcggc ggacgccgga
      421 cgctcgcggt caaacgagtc cgctaccagg atggtgcggt cctcaccttc gacgacatca
      481 ccgatcagct gtcggaccag cgcaacgccg cctggtcgga catcgcgcgg cggatcgccc
      541 atgaaatcaa gaacccgctg acaccgatcc agcttgcagc ggagcgtctc cagcggcgct
      601 tcggaagcga aatcgcgtcg gatgcggaga cgttcgagcg gttgaccggc acgatcgtcc
      661 ggcaagtcgg cgacctccgt cgcatggtcg acgaattctc gaacttcgcg cgaatgccca
      721 agccggtgtt ccggacggag aacgtgcacg agatcgcccg ccagtcgcta ttccttcacg
      781 aagtcgcgca tcccgaaatc aagttcgccc tcgacccgac gaacggcgat tttccaatga
      841 cttgcgaccg tcgccagctt gggcaggcct tgacgaacgt cgtcaagaac gccgtcgaag
      901 ccattgagac gaggcggtcc cgcggcgaac accatctcgg cggcgaccgc gtcgagctgc
      961 acctgcgccg agacgatgac cagcttgtgg tcgacgtcac cgacaccgga atcggactcc
     1021 ccgacgaccg caagaggctg accgagccct atatgacgac ccgtgtgcgg ggcactgggc
     1081 tgggcctcgc gatcgtcaag aagatcgtcg aggaacattg cggagagatc gctttcctcg
     1141 atcgcaaggg cggcggcacc cacgtccgca tcgcgttcga cgtcgaccgg cttgcgcaga
     1201 tggaaaggga ccactccgga tccgagcccg gcgatggaag cgaagatggt acttatatct
     1261 aaggagcgtt gctgatggcc ctcgaagtgc tggtggtcga cgatgaggaa gacatccgcg
     1321 acctggtcag cggagtcctg caggacgagg gctattcggt tcgctctgct gcggacagtt
     1381 cgtcggcgct ggacgcaatg aaggaccggc ggccgtcgct ggtcctgctc gacgtgtggt
     1441 tgcagggatc gcggctagac ggcctgcagc tgttgcagga aatcaagcgc aacgacccga
     1501 gcctgccggt gctgatgatt tcagggcacg gcaaccttga caccgccgtc gccgcggttc
     1561 gcgagggtgc cgtcgatttc atcgagaagc cgttcgaggc ggggcacctg ctgcacctcg
     1621 tgtctagggc gacggaaaca gaccgtcttc gccgcgagaa cgaaagcctc cgccagcaaa
     1681 tcgtccacga tgcggtgctg agcggcaatt cggtggcaat caacactgtc cgggcgacgt
     1741 taaagcgcgt cgccccgacc gggagccggg tcctgatcac cgggccggcg ggggtcggca
     1801 aggaagttgc cgcgcgcacg atccaccagt ggagcacgcg cgccaacggc ccgttcgtcg
     1861 tcgtgtccgc ggcaatgatg cacccggaac gcgtggagga ggagctgttc ggcgtcgaca
     1921 gcgatgaagg cagccgcccc ggcttgctcg agcaggccca tggcgggacc ttgtttctcg
     1981 acgaaatcgc cgacatgccg ttgacgactc agggcaagat cctgcgagtg ctgaccgacc
     2041 aaagctacca ccgcgtcggt ggccagcgcc cggtcaaggt cgatgtccgg gtcctctccg
     2101 cgacgtcacg cgaccttgcg caagaaatcg ccgacgggcg gttccgcgag gaccttttct
     2161 atcggctaaa cgtggttccg gtgaggcttc cgccgctacg cgaacggcgc gaggatatcc
     2221 ctgagctggc caaccatttc ctcgcaaggt ttgcggccga gcggcgcatt ccgactccac
     2281 agctttcgga ggaagcggcc gcggcgctcc agtcccacga atggcccggg aacgtccggc
     2341 agctccggaa tatcatcgag cggaccatca tcctcgcacc cttggagcgc gttgagcgca
     2401 tagaggcgga catgcttccc gcagagatcc tcgaaagcga gggctcgcct ggcctttcga
     2461 caccggcaat gacgatcatg ggaagtccgc tccgcgaggc gagggagtcg ttcgagaggg
     2521 aatatctgaa aattcagatc cgccgctttt cgggcaacat ctcgcggaca gcgtcgttca
     2581 tcgggatgga gcgctcggcc ctgcaccgga aactcaaggc cctgggaatc ggcgacaagc
     2641 gcgacgcgga gtgacggacg cctcgaacat ggccggcaag cctgcaagcc tccaggaccg
     2701 tttcctcaac agtgcccgca agtcgaaggc cccggtgacg ctgtttctac tgaagggcgt
     2761 gaaactgcag ggcgtgatca cctggttcga tccctattcg ctcctgcttc gcagggacgg
     2821 gcagagccag cttgtgtaca agcattcggt ttccaccgtc atgccaacca ggagcctcga
     2881 cctcggcgag atgaatccgc ccgaaacgag catgatcgcg gcgctccagg acacattcct
     2941 ttcggcagcc gcccgcgagc accagcggat gaccgtgttc ctggtcaatg gcgtgatgct
     3001 gcagggcgag gtgtcggttc acgaccagtt ctgcctgctc ctggaacgcg cgggacaggt
     3061 tcagcttgtc tacaagcacg caatttcgac gatccagcct gaagacgcgc tatcgctcgg
     3121 cggcacgcca agcgacgagc cggcggacga atgaccgtta cgatcggcag cggatcggga
     3181 gcattcgatg tgacccgcgg cgagcgagcg ctcgtcgtcg gaatcgatcg ggctgggaag
     3241 ggtgatgggc gctcgtcaga agccaggctc gaggaagccg tcggcctggc cgaggctatc
     3301 gggatcgacg tcgtcggcag gcggacgttc cggcttcgct cgcccaagcc ggcgactctc
     3361 ctcggcaagg gccagataga ggagcttgcg gcggctgcac gcgaccatga tgccgggctg
     3421 ctcgtcgtcg atgctccgct ggcgccggtg caacaaaagt cgctcgagga acaggttggg
     3481 acgaaggtca tcgaccgcac cagcctgatc ctggaaatct tcggcgaacg cgcggcgacg
     3541 gccgaagggc ggctgcaggt cgagctcgcg catctcgact accaggctgg ccggctggtc
     3601 aggagctgga ctcacctcga gcggcagcgg ggtggattcg gcttcctggg tggtcccggc
     3661 gagacccaga tcgaagccga ccggcggctg atccgcgacc ggatggcgcg aattcggcgg
     3721 gagctcgaac aggtgaagcg cacccgctcg cttcaccgcg aacggcgcca gcgcgcgccg
     3781 tggccggtga ttgcgcttgt cggttatacg aacgcaggaa aatctacgct tttcaaccgc
     3841 atgacaggcg gcgacgtgct cgccgaggac atgctgttcg cgaccctcga tccgacgatg
     3901 cgtgacgtca agttgccggg gttcgacaag gcgatcctct ccgacactgt tggattcgtt
     3961 tccgacctgc ccacggagct ggtggctgcg ttccgtgcga cgctggagga ggtcgcgtcg
     4021 gcggacctgc tggtgcacgt acgcgacatc gcccatcccg accgcgaggc gcagcgcgaa
     4081 gacgtcgagc gggtgcttgc gcagctcggc gtcggtgcgg aagaggaggg ggctccgccc
     4141 aagatcgagg cctggaacaa ggtcgatctc cttgccccgc aggaccgcga gcaggtcctt
     4201 gccgaggcgg cgcgccggga gaatgtcgtc cccgtctccg cgctgaccgg catcggcatc
     4261 gacgcgcttc gagagcggct cgccgaggcg ttacacagcg gcgcgcagct gcattcgatc
     4321 agcctccctt cgagcgacgg tggcaagatt gcgtggctgc actcgcgcgg tgacgtcatc
     4381 gaccagcaat cgcacgacag cgagattgtt ctgcaggtgc ggctgtcgcc ggaaaattgg
     4441 gcgcgatttc agtcgctttg agcggctttc gccttgctcc aaagcgcctc tttctcgtcg
     4501 aggctcatcg cctcgaagcc cggttctgcc tcgatagcgc gaaagcgtcg ctcgaacttg
     4561 cgattggctt gtctgagagc ctcttcgggg tcaacgttga gatgtcgtgc caagttgacg
     4621 acggcgaata agaggtcgcc aagctcgtcc gcgcggcgct cggggtcgct ttcgcggtca
     4681 agctccgcaa gttcctcgtc gatcttgact cgcggaccga aggaatccgg ccagtcgaag
     4741 ccggtgcgcg cggcccgtcg ctgcaacttc agcgcgcgat cgagggcggg aagggcgact
     4801 gccactccgg cgagggcgct ttcgtcggtc ttttgcttgc gttcggccgc cttgatcgcg
     4861 tcccagccgg ggctttccac cgcatcgccg aatatgtggg ggtgccggcg ctccagcttg
     4921 tcgcaaatcc gtccgacaac gtcatcgagc gtgaaatggc ccagttcttc cgccatttgc
     4981 gcgtggaaga cgacctggag ctgaagatcg ccgagctcgt cctcgagcgc ctccatgtcg
     5041 ccgcggtcga tcgcgtcagc aacctcatag gcttcctcga tcgtgtaagg agcgatcgtc
     5101 ctgaaggatt gcttcagatc ccattcgcag ccgcgctctg ggtcgcggag gcggcgcatg
     5161 attgcgacaa gtcgctccag gttcataaga ggagcccccc agccgtcccg gagccgacat
     5221 cctcaagtct gataatatgt attatgtaaa ataaaagagg catcagggag ccagcaccag
     5281 ataattgccc tcgaccctcc acccgctgag cgacgacagg aagttcatcc ccagcaggtt
     5341 cacgtcgtcc tggtcgctga tatcgacagg aaagtcggtt cgctcgatag agccgacctg
     5401 caagcggtcg gctcgtccct gggttaccag gatgcgcccg ttcgctgtgt tgacgatgct
     5461 tttctggctg ccaatccgca tccctgcagc gcgtgcgaca ctcctggaga ccgtcgtgac
     5521 cgaggcgccg ctgtccacca tgaaccatac gtcgcggccg ttgagctggg cttccaccca
     5581 gaagtgaccg tcctcgcgga tgggaattcg gacgttttcg ccttggacga tcgccgtgcc
     5641 cgtcgcttcg gcacgcagcc gctggcccaa atcggagagt tcgctgcgga atgcgaacag
     5701 gatgaaggcg agcccgaaga ttccgatcca cgcgatcgcc atcttcgccg ccgaacccag
     5761 cggaattcgc cgcccgatca acgcggtggc gacgaatccg gccgccagga catagaagac
     5821 gatgtagggc gcgttgtcgc tcacgcctgt accgctttgg cgaacaagcg gaagaagttg
     5881 gccgtggtcg catcagcgag cgagtccggc tcgtcccccc tcaactcggc aacgaaggcg
     5941 gccgtgtcgg ccacgaacgc gggctcgccc gtctttcccc gatgcgggac cggcgcgagg
     6001 aacggcgaat ccgtctcgac cagcattcgg tcgagtggaa gccatttggc cgtttcctgc
     6061 aggtcacgcg cgttcttgaa ggtcacgatc cccgacagcg agacgaagaa gcaaaggtcc
     6121 agccccttgc gcgccagatc cgcgcttccg gtgaagcaat ggaggactcc ggtgaccccg
     6181 ccctccttca ccgcttgact gagcatctcc gcagtgtcgg cctccgcctc tcgcgtgtgg
     6241 acgacaagag gaagtcccga tgtccgcgcc gagtcgatat gcgcctggaa gcgttctcgc
     6301 tgcgcggcgc ggtcggactt gtcgtaataa tagtcgagcc cgcactcgcc gatcgcgacg
     6361 acgcgcgggt gcttcgaggc ttccaccagc gcggccgaac cgagatccgg gtgggcatcg
     6421 gcttcgtgcg ggtggactcc gacggttgcc cacacgtcgg cgttgctatc ggcaacggca
     6481 atgacgtcat tccactccga ctggcgagtg gagatgttca ggaatcccgc gaccccgcgg
     6541 tcgcgtgcat tggcaagcac ctcatcctgc cgctcggcca gtccttcgta attgaggtgg
     6601 cagtggctat cgatcagctt cacgccgcct ccccctcctc ctgcgccaac tcgaggcgcg
     6661 ggaagatcgg aaccggttgc tccagcgcgc cgtgaagccc gtcgtcgatc accctgatga
     6721 gtcgctctgc agacgccggg atcacgggga ttacggcctc tgcaagcttt cggattgccg
     6781 caaccagcgt gcccaataca tcggccattc gctgcgggtc cgtcttgcga agcgcccagg
     6841 gggcggccgc gtcgacatat gcgttgcacg caaataccgc gcccatccac gcctcgaggc
     6901 cgatcgagaa agcgaaatct ccgaagcggg cgctgagctc tgtcaccgca ttgtcgacgg
     6961 ccgcgagaag cgccttgtcc tcctgcgctt ctccaggcgc cggaacgacg ccatccaaat
     7021 tcttgtaaat catcgacaat gtgcgctgcg ccagattccc aaaactgttc gcgagctcgg
     7081 cgttgacacg gttgacgatc gcttcggccg aatagctgcc gtcctggccg aacggcactt
     7141 cgcgcatcag gaaataacgc agctggtcca ccccgaaccg ttcggcgagc accattgggt
     7201 cgacaacgtt gccgacactc ttcgacatct tctcgccgcg gctgagcagg aagccgtgcc
     7261 cgtagacctg cttcgggagt gcgatccccg ccgacatcag gaacgccggc cagtagatgg
     7321 cgtggaagcg aaccacgtcc ttgccgatca ggtggacgtc ggcgggccta taccgcttca
     7381 tcaggtcggt ttcgccggga taaccgaggc cggtgagata attggtcagc gcgtcgagcc
     7441 agacatacat cacgtggtcg tcgctgcccg gcaccttcac gccccagtcg aagctggtgc
     7501 gcgaaatgga caggtcggac aggccgccct cgacgaaccg catcacctcg ttgcggcggc
     7561 tttcggggcg gatgaagtcc gggttggccg aataatggtc gagcagcttc gcctggtagg
     7621 ccgaaagccg gaagaaccag ctctcctcga ccgtccactc gaccggagag ccctggggcg
     7681 acagcttttg ctccccttcc ccgtcgatta actcgccctc gtcataatag gcttcgtcgc
     7741 ggaccgagta ccaaccctcg tagcgcccga gatagaggtc gcccttctcg gccatcgctt
     7801 cccagatcgc ctggctggcg cggtggtgcg cctcctcgga cgtccggatg aaacgatcat
     7861 aggaaatatt aagacgctca tccatctgct ggaaaagcga tgacattttg tcggcaaact
     7921 ggcgcggctc gacttcttcg gcccgggccg cctgggccat cttcaacccg tgttcgtctg
     7981 taccggtctg aaagcggaca tcgcggcctt gcgcccgctg gaaacgggcg atgacgtcgg
     8041 ccgcgatcgc ctcataggcg tggccaatat gcggcgggcc gttgggatag ttgatcgcgg
     8101 tggtgatgta gaagggctcg cccatagcgc cgccgtagcg ggcgctcccc cgcccttcaa
     8161 gaacggcgcg gttcggcgac cgacgccagg attccgccca gctggaaaac cgttgccgcg
     8221 ggatcgagcg aaagccgcgg agcaatggcg acgagctcgc gcacccgcga ataagcctca
     8281 agtgcccgtt cgcgctgcgg ctcggccagt gtccgtgctt ctttcgcgac gagcgacggc
     8341 agcaggtcga ggaatgccga atagcgatcg gccgccgcct tgcgcgccag ctggctggcg
     8401 agggccgagc gtttgctgtt gtcgggatcc ccatggcgaa ggatcgccat tgcctccgtc
     8461 tccagcggcc cgagctcgag agaggcgaat gccagcgccc gtcccaccga tccgttcgcc
     8521 agcgggatca gccgctcgcg ctctgccgga gcgacctgcg gaagctgtgc ttcgagaaca
     8581 gacgccatgg cgtcactgcg gagcgtgtgg aattcgaggc ggcggcagcg tgaccggatg
     8641 gtcggcagaa gacgccctgg ggcgtggctg acgaggaaga agacgcagtt gggcggcggc
     8701 tcctcgagca tcttcagaac ggcattggca gccgacggct cgagctcgtc gacgctgtcg
     8761 atcacggcca ctcgccagtt cgaaagcgcc gggctgaggt cgaacagctc cgatagctcg
     8821 cgcacctgct tgacgctgat gttgcgggcc agcccttcgc ccttttccct cggcaatcgc
     8881 tgcagccagc gcatgtcggg atggcttccc gccgcgatca gcttggcgat cggatgacct
     8941 tggggcgtat cgagcccggg cgcgtcgaac ggaggcccag ccgcctgcgc cagaaggcga
     9001 accgccgcat ccagcgcgaa tgtcgccttc cccacgccgc gcggaccggc gagcagccag
     9061 gcgtgatgca aggcgccgga atcccaggct cgccggaact gctcgaccgc cttgtcgtgg
     9121 ccggcgatca cgggagcagg tccgagatcg ccgcaaccaa ccgctgcgtc acttcttctt
     9181 tgttgcccga ggcgtcgatg agcttcatcc gatccggctc agcggcggcg acgatccgga
     9241 aggcgagctc gaccttgtgg tggaaatcct cactgcggcc gccgattcgg tcgccgggat
     9301 gcccatcacg cgcccgcgcc cgctcgctgc cctcgctaag cgtcagcact agggtgcggt
     9361 cgggcatgaa gccgccgcaa gcgaagtcgt gaagttccct aagccgctcg atcccaagcc
     9421 cgccggcacc accctgatag gcgaaggacg aatccacgaa gcggtcgctg atcacccatt
     9481 cgccgcgctc gagcgcgggc cgaatggtct tttcaacatg atcgg
//
LOCUS       DATAKH010000161         3015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_18527,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000161 DATAKH010000000
VERSION     DATAKH010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18527"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1064
                     /locus_tag="VHN55_06690"
     CDS             <1..1064
                     /locus_tag="VHN55_06690"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016746053.1"
                     /note="Catalyzes the rate-limiting step in dNTP synthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEX2803653.1"
                     /translation="YIVFSDTVNRMMPKHHRELGLKVSTSNLCSEITLPTGVDHLGND
                     RTAVCCLSSLNLETWDDWNGDKQFIEDVMRFLDNVLSDYIARAPDEMARAKYSAERER
                     SVGLGVMGFHSFLQARSIPFEGAMAKSWNLKIFKHIRAQVDTASMMLAKERGPCPDAA
                     DMGVMERFSCKMAIAPTASISIICGGTSACIEPIPANVYTHKTLSGSFVVKNPHLQRL
                     LESKSKDSDKVWNAILENGGSVAGLDFLTAEEKDVFKTSFEIDQRWLIELAADRTPYI
                     DQAQSLNLFIPADVDKWDLLMLHFRAWELGMKSLYYLRSKSVQRAGFAGGVEADNTPE
                     LKEIPLASTTDYDECLACQ"
     gene            1055..1210
                     /locus_tag="VHN55_06695"
     CDS             1055..1210
                     /locus_tag="VHN55_06695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803654.1"
                     /translation="MPIRLVPKFRRPKTKAGKAGMIAGGVVAGLIALDLLALAATAVI
                     AATVGMR"
     gene            1207..1389
                     /locus_tag="VHN55_06700"
     CDS             1207..1389
                     /locus_tag="VHN55_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803655.1"
                     /translation="MTTGSILEVAAAVVLLVAGIVAYRRGGNQGAVILFVVAALLLVH
                     GLDLLQYRPSASELGQ"
     gene            1386..1778
                     /locus_tag="VHN55_06705"
     CDS             1386..1778
                     /locus_tag="VHN55_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803656.1"
                     /translation="MTRRFSGGGGSRGGSGGLPLRFLAAAALAFALAACAATQSAGAV
                     EAQAPGFLLGVWHGFIFPIAWIVSLFADNVAVYAVPNNGGWYDFGYFIGIVFIGVGAR
                     KGHVTYRDRVIYRDRGPVIDVEARRVDE"
     gene            1775..2014
                     /locus_tag="VHN55_06710"
     CDS             1775..2014
                     /locus_tag="VHN55_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803657.1"
                     /translation="MTTAHLITLVIGIVALGVGLTTLVRPAITRRLLGLADSEAATYA
                     LRIGGMMMAAFGLVLVLFVAAFPATAATLTNSQGA"
     gene            2020..>3015
                     /locus_tag="VHN55_06715"
     CDS             2020..>3015
                     /locus_tag="VHN55_06715"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEX2803658.1"
                     /translation="MPLLEARKQYKPFEYPWAFDYWKRQQQIHWMPEEVPLGEDCRDW
                     AQKLSDHERNLLTQIFRFFTQAEVEVQDCYHEKYGRVFKPTEVKMMLAAFSNMETVHI
                     AAYSHLLDTIGMPESEYSAFLQFKEMKDKHDYMQQFGVDNDEDIAKTLAMFGGFTEGL
                     QLFASFAMLMNFPRFNKMKGMGQIISWSIRDESLHCEGIIKLFHAFTRERDCLTRDVK
                     ESIIDTCQKTVRLEDAFIDLAFEMGPVEGMTAKQIKKYIRFIADWRLGQLGFAPIYMV
                     DEHPLPWLAPLLNGVEHANFFETRATEYSKAATRGNWNEVWDNFDRRQKAKAANDG"
BASE COUNT          539 a         1051 c          912 g          513 t
ORIGIN      
        1 cttacatcgt gttctctgac acggtgaacc ggatgatgcc gaagcatcac cgcgaactgg
       61 gcctcaaggt ctctacctcg aacctgtgct cggagatcac cctgccgacc ggagtcgacc
      121 acctcggcaa cgaccgcacc gcggtctgct gcctctcctc gctcaacctc gagacctggg
      181 acgactggaa cggcgacaag cagttcatcg aggacgtgat gcgcttcctc gacaatgtgc
      241 tctccgacta tatcgcccgt gcccccgacg agatggcgcg cgccaagtac agcgccgagc
      301 gcgagcgcag cgtcgggctc ggcgtgatgg gcttccactc cttcctccag gcgcgctcga
      361 tcccgttcga gggggcgatg gccaagagct ggaacctcaa gatcttcaag cacatccgcg
      421 cccaggtcga caccgcctcg atgatgctgg ccaaggagcg cgggccctgc cccgacgcgg
      481 ccgacatggg cgtgatggag cgcttttcct gcaagatggc gatcgccccg accgcgtcga
      541 tctcgatcat ctgcggcggc accagcgcct gcatcgagcc gatcccggcc aacgtctaca
      601 cccacaagac gctgtcgggc agcttcgtgg tcaagaaccc gcacctgcag cggctcctcg
      661 aatccaagtc caaggacagc gacaaggtgt ggaacgcgat cctcgagaac ggcggctcgg
      721 tcgccgggct cgacttcctc accgcggaag aaaaggacgt gttcaagacc agcttcgaga
      781 tcgaccagcg ctggctgatc gagctcgccg ccgaccgcac gccctacatc gaccaggcgc
      841 agtcgctgaa cctcttcatc cccgccgacg tcgacaagtg ggaccttctg atgctccact
      901 tccgcgcctg ggagctgggc atgaagtcgc tctattacct gcgctccaag tcggtccagc
      961 gcgccggttt cgcgggcggg gtcgaggccg acaacacgcc cgagctcaag gaaatcccgc
     1021 tcgcgtcgac cacggactac gacgagtgtt tggcgtgcca ataaggcttg tccccaaatt
     1081 ccggcgcccg aagaccaagg cgggcaaggc gggcatgatc gccggcggag tcgtcgccgg
     1141 gctgatcgcg ctcgaccttc tcgcgctcgc cgcgaccgcg gtgatcgccg ccaccgtggg
     1201 gatgcgatga ccaccggctc catcctcgag gtcgcggccg cggtcgtcct gctggtggcg
     1261 gggatcgtcg cctatcgccg cggcggcaac cagggcgcgg tgatcctgtt cgtcgtcgcc
     1321 gcgctcctgc tcgtccacgg cctcgacctt ctccagtacc gcccgtcggc gtcggagctt
     1381 gggcagtgac ccgccgcttc tccgggggcg gggggagccg cggcgggagt ggtgggctcc
     1441 cgctgcggtt cctcgcggcc gccgcgctcg ccttcgccct cgccgcctgc gccgccaccc
     1501 agtcggccgg cgcggtcgag gcgcaagcgc ccggcttcct gctcggagtc tggcacggct
     1561 tcatcttccc gatcgcgtgg atcgtctcgc tgtttgccga caatgtcgcg gtctacgcgg
     1621 tgcccaacaa cggcggctgg tacgatttcg gctatttcat cgggatcgtc ttcatcggcg
     1681 tcggcgcgcg caagggccac gtcacctatc gcgaccgagt catctaccgc gaccgcggcc
     1741 ccgtcatcga cgtcgaggcg cggagggtcg acgaatgacc accgcccacc tcatcacttt
     1801 ggtcatcggc atcgtcgcgc tcggcgtcgg gctgacgacc ctcgtcaggc ccgcgatcac
     1861 gcgccgcctg ctcggcctcg ccgacagcga agccgccacc tacgcgcttc gcatcggcgg
     1921 aatgatgatg gccgccttcg gcctcgtcct cgtcctgttc gtcgccgcct ttcccgccac
     1981 ggcggccacc ctgaccaatt cccaaggagc ttaagtccaa tgccccttct cgaagcccgc
     2041 aagcagtaca agccgttcga atacccctgg gcgttcgatt actggaagcg ccagcagcag
     2101 atccactgga tgcccgagga agtgcccttg ggcgaagact gccgtgactg ggcgcagaag
     2161 ctgtccgacc atgagcgcaa cctgctcacc cagatcttcc gcttcttcac ccaggccgaa
     2221 gtcgaggtgc aggattgcta ccacgagaaa tacggccgcg tgttcaagcc gaccgaggtc
     2281 aagatgatgc tcgccgcctt ctccaacatg gagacggtgc acatcgccgc atactcgcac
     2341 ctgctcgaca cgatcggaat gccggagagc gagtacagcg ccttcctcca gttcaaggag
     2401 atgaaggaca agcatgatta catgcagcag ttcggggtcg ataatgacga ggacatcgcc
     2461 aagaccctcg ccatgttcgg cggcttcacc gaggggctgc aattgttcgc cagcttcgcg
     2521 atgctgatga acttcccgcg cttcaacaag atgaagggca tgggccagat catcagctgg
     2581 tcgatccgcg acgagagcct gcattgcgaa ggcatcatca agctgttcca cgccttcacc
     2641 cgcgagcgcg actgcctgac ccgcgacgtc aaggaatcga tcatcgacac ctgccagaag
     2701 acggtgcggc tcgaggacgc gttcatcgac ctggcgttcg agatgggccc ggtcgaaggc
     2761 atgaccgcca agcagatcaa gaagtatatc cgcttcatcg ccgactggcg cctcggccag
     2821 ctcggcttcg cgccgatcta catggtcgac gagcaccccc tcccctggct cgccccgctc
     2881 ctcaacggag tcgagcacgc caacttcttc gagacccgcg cgaccgaata ttccaaggcc
     2941 gcgacccgcg gcaactggaa cgaggtgtgg gataatttcg accgccggca gaaggcgaag
     3001 gcggcgaacg atggg
//
LOCUS       DATAKH010000162         3180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_38225,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000162 DATAKH010000000
VERSION     DATAKH010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38225"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VHN55_06720"
     CDS             <1..298
                     /locus_tag="VHN55_06720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEX2803659.1"
                     /translation="APDGTFRHWAAYDIAPNTRSIPRGESVGKQATNDFGKSGYGGPC
                     PPKGHGVHHYHFKLYALDVDGLTPPDSAKVEQVEQEAKRHAIAKAEIVGTYERK"
     gene            complement(300..1028)
                     /locus_tag="VHN55_06725"
     CDS             complement(300..1028)
                     /locus_tag="VHN55_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX2803660.1"
                     /translation="MTIRIAMWSGPRNLSTAMMRSFGSRADTYVTDEPFYGCFLNQTG
                     LEHPMREDVVASMDCDWRSVMDSLSGDPPDSSPIWYQKHMWHMMVGPIGYEDFAGFRH
                     AFLIREPARMIASYLRKREAAQFEDFGLEKQAEFFEREAERLGHAPPVIDANDVLANP
                     QGVLSKLCEALGIGWDPVMLRWEPGRRETDGVWAAHWYNAVEKSTGFGRPDTQPVKLP
                     TEAQRLADRCRPYYQRLADFRLRP"
     gene            complement(1025..1945)
                     /locus_tag="VHN55_06730"
     CDS             complement(1025..1945)
                     /locus_tag="VHN55_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017668242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HEX2803661.1"
                     /translation="MTKSLHDVSDPRNASVLVNVNGELKPRAEAVVSVFDSGFMLGDG
                     VWEGLRVHNGKLAFLDRHLERLFEGAKAIAMDIGLSPEELTRRLYDTLDANGMSDGVH
                     VRLMVTRGVRSTPYQDPRVVVGGATIVIVPEYKEPPKGLDERGLKLFTVHVRRGDPAV
                     QDQKINSHSKLNCILASVQATQAGADEALMLDPHGFVATCNSTHFFIVRKGEVWTSSG
                     KYCLGGITRALVLEVCREAGIPAVEKDFSLTDVYGADEAFVTGTFAGVVPVREVDGRK
                     LTDGRGPMVERLQALYAERVERDIAQQTRP"
     gene            complement(1994..2398)
                     /locus_tag="VHN55_06735"
     CDS             complement(1994..2398)
                     /locus_tag="VHN55_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014074983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2803662.1"
                     /translation="MKRGYCDDIERATVENDDFRRVLYTGEHLQLVLMTLQPGEEIGE
                     EVHPDRDQFFRIEQGEGAIDIDGRENRVEDDFAVVVPAGARHNVRNIGSQPLRLYTLY
                     GPPEHRDQIVQATKDEADRRHAQEEWQGETTE"
     gene            complement(2395..2652)
                     /locus_tag="VHN55_06740"
     CDS             complement(2395..2652)
                     /locus_tag="VHN55_06740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803663.1"
                     /translation="MRKFGLVGAAALATAAAACSQSSSDNVMAPEANALDPADVNAAL
                     GPEITTPETNMTANDVNSDANDSSGPDDTTANNSSDEEPDQ"
     gene            complement(2685..>3180)
                     /locus_tag="VHN55_06745"
     CDS             complement(2685..>3180)
                     /locus_tag="VHN55_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2803664.1"
                     /translation="HASLASDASIQLAKKHGTWFDMDIYNDDYILATGTANGTEQQSL
                     DKERMIGLKQRQTFQRAVRAGVKMTFGSDAGVYPHGHNGKQFAKMVQWGMTPLQAIQA
                     ATVNAGEALGRPGDVGQIAPGFYGDIIAVRGDPLADVTLLENVGAVIKGGMLVKEPRV
                     QPAR"
BASE COUNT          548 a         1046 c          973 g          613 t
ORIGIN      
        1 cgcgcccgac ggcaccttcc ggcactgggc ggcctatgac attgcgccga acacgcgctc
       61 gatcccgcgc ggggagagcg tcggcaagca ggctaccaac gatttcggca agtccggcta
      121 tggcggcccc tgcccaccca agggccacgg cgtccaccat taccacttca agctctacgc
      181 actcgatgtc gatgggctga cgccgcccga cagtgcgaag gtcgaacagg tggagcagga
      241 agcgaagcgg cacgccatcg ccaaggcgga gatcgtcggc acatacgagc ggaagtagat
      301 caggggcgaa gcctgaaatc cgccagccgc tggtaataag ggcggcagcg gtcggctagg
      361 cgctgcgcct cggtcggaag tttgactggc tgcgtgtcgg gccggccgaa gccggtgctc
      421 ttctcgaccg cattgtacca gtgcgcggcc cagacgccgt ctgtctcgcg gcggcctggc
      481 tcccacctca gcatcaccgg gtcccacccg atcccgagcg cttcgcacaa tttcgacagc
      541 acgccttgag ggttcgcaag cacgtcgttt gcatcgatga ccggcggtgc gtggcccagc
      601 cgctcagcct cgcgctcgaa gaattccgcc tgtttctcta atccgaaatc ctcgaactgc
      661 gccgcctcac gctttcgcaa ataggaagcg atcatccgcg cgggctcgcg gatcaggaag
      721 gcgtggcgaa aaccggcgaa atcctcatag ccgatggggc cgaccatcat gtgccacata
      781 tgcttctggt accagatcgg cgagctgtct ggcgggtctc cggagagcga gtccatcacg
      841 cttcgccagt cgcagtccat cgacgcaacc acgtcctcgc gcatcggatg ttcgagcccg
      901 gtctgattca ggaagcaacc gtagaagggc tcgtcggtga cataggtgtc ggcgcggctc
      961 ccgaagcttc gcatcatcgc ggtggacagg ttgcgaggcc ccgaccacat cgcgattcgt
     1021 atggtcacgg gcgcgtctgt tgcgcgatgt cgcgctccac tcgctccgca tagagcgcct
     1081 gcagccgctc gaccatcggg ccgcgaccgt ccgtcagctt gcgcccatcc acctcgcgca
     1141 ccggcacaac cccggcgaag gtgccggtga cgaacgcctc gtcggcgccg tagacatcgg
     1201 tgagcgaaaa gtctttttcg accgccggaa ttccggcctc gcggcacacc tcgaggacca
     1261 gcgcacgagt gatcccgcca aggcaatact tcccgctcga ggtccacact tcgcccttgc
     1321 ggactatgaa gaagtgggtg gagttgcagg tcgcaacgaa gccatgggga tcgagcatca
     1381 gagcctcgtc cgcgccggcc tgggtcgcct gcacagacgc caggatgcag ttcagcttcg
     1441 agtgcgaatt gatcttctgg tcctgaaccg ccgggtcgcc gcggcggaca tggacggtga
     1501 acagcttgag cccgcgctcg tcgagtccct tcggaggctc cttgtactcc gggacgatga
     1561 cgatcgtggc gccgccgacc acgactcggg gatcctggta aggggtcgag cggacccctc
     1621 gggtgaccat aagccgaacg tggactccat cgctcatgcc gttggcgtcg agcgtgtcat
     1681 agaggcggcg agttagctcc tccggcgaca ggccgatatc catagcgatc gccttggcgc
     1741 cttcgaacaa tcgctcgaga tggcggtcga ggaaggcaag cttgccattg tggactcgaa
     1801 gcccctccca cacgccgtcg ccgagcatga agcctgaatc gaataccgaa accaccgcct
     1861 cggcacgcgg cttgagctcg ccgttcacgt tcaccaggac cgatgcgttc cgcgggtcgg
     1921 aaacgtcgtg gagcgatttg gtcattcggc cgccattgcg agaagcgcag ctacgaagca
     1981 atcgcgacga gcgttattcc gtcgtttcgc cttgccattc ctcctgggcg tggcgccgat
     2041 ccgcttcatc cttcgtcgcc tggacgatct ggtcacgatg ctcgggcggg ccgtaaagcg
     2101 tgtagagccg cagcggctgc gagccgatat tgcggacgtt gtggcgtgca ccggccggaa
     2161 cgaccaccgc gaaatcgtct tccacgcggt tctctcgccc gtcgatgtcg atcgcgccct
     2221 cgccctgctc gatccgaaag aactgatcgc ggtcgggatg aacctcctcg ccaatctctt
     2281 cgcccggttg cagcgtcatc aggacgagtt gcaaatgctc gccggtgtag aggacccgcc
     2341 ggaagtcgtc gttttctacc gtcgctctct cgatatcgtc gcaatagcca cgcttcattg
     2401 gtcgggctcc tcgtcgctgc tgttgtttgc ggtcgtgtcg tcggggccgg aggagtcatt
     2461 ggcatcggag ttgacgtcgt ttgcagtcat attggtctcc ggcgtcgtga tttccggccc
     2521 aagcgccgca ttgacgtcgg ccgggtcgag ggcattcgcc tccggcgcca tgacattgtc
     2581 cgaactgctt tggctacacg ccgctgccgc agtggcaagc gctgcagcac ccaccaagcc
     2641 gaatttgcgc atggtctttc ccttctcaat tccgcttttc gcgctcatcg cgctggctga
     2701 acgcgcggct ccttcaccag catgccgccc ttgatcaccg caccgacatt ctcaagcagc
     2761 gtaacgtcag ccagagggtc gcctctcact gcgataatgt ctccatagaa accgggggcg
     2821 atctggccga catcgccggg acggcccagc gcttcgccgg cattcacggt agcggcctgg
     2881 atcgcttgca gcggcgtcat cccccattgc accatcttgg cgaactgctt gccattgtgg
     2941 ccgtgcggat agactccggc atcgcttccg aacgtcatct tcacgcccgc cctgacggcg
     3001 cgctggaacg tctggcgctg cttgaggccg atcatccgct ccttgtcgag gctctgctgc
     3061 tcggtgccgt tggcagtgcc ggtcgcgagg atatagtcgt cgttatagat atccatgtcg
     3121 aaccaggtgc cgtgcttttt cgcgagctgg atgctggcat cgctcgcgag gctcgcatgt
//
LOCUS       DATAKH010000163         7625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_28419,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000163 DATAKH010000000
VERSION     DATAKH010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7625
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28419"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2256)
                     /locus_tag="VHN55_06750"
     CDS             complement(<1..2256)
                     /locus_tag="VHN55_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDC48 family AAA ATPase"
                     /protein_id="HEX2803665.1"
                     /translation="MADTDVAERPKTRRVQVASLPPGDSGRGIARLPVKLMKDLSLNE
                     GDTIEIVGKRSTAARAIRPYGEDEGLEIIRLDGLSRANAGVGSGDFVEVRKAKSKAAT
                     RVVFAPAQDNIRLQGSAGALKRTFAGRPLCEGDTVATAGHQRVNANMPDQVRQMLNAP
                     AFALQEVRLKVVTAVPKGIVHIDANTNVELLPEFLGGEPGDRRADVTYDDLGGLHGTI
                     DALREMVELPLRHPELFQRLGVDPPKGVLLHGPPGTGKTRLARAVANESSANFFSIAG
                     PEIMGSAYGESERKLRELFEQAAAAAPAIIFIDEIDSIAPKRGQVQGEAEKRLVAQLL
                     SLMDGIEPRQNLVVIAATNRPEALDEALRRPGRFDREIVVGVPDERGRFEILEIHTRG
                     MPLSADVDVQELARRTYGFVGADLAALTREAAMEAVRRIMPRINPEEDTIPTEVLDAL
                     SVENLDFENALKRVQPSAMREVMVEAPEIRWSDIGGLDVAMEKLREGIELPLKHPEAF
                     RRIGIRPAKGFLLYGAPGTGKTLLAKATARESRANFIATKSSDLLSKWYGESEQQIAR
                     LFARARQVAPTVIFIDEIDSLVPARGGGMGEPQVTERVVNTILAEMDGLEELNNVVLI
                     GATNRPSLIDPALLRPGRFDELIYVAPPETAGRRRILAIHTSGMPLANDVDLESLAQR
                     TERFTGADLEDLVRRAGLTALRRGLDAAKVTKEDFESALSETRASVTPQMLEEYDRIQ
                     ETLKSDAVRPTG"
     gene            complement(2353..3111)
                     /locus_tag="VHN55_06755"
     CDS             complement(2353..3111)
                     /locus_tag="VHN55_06755"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010162353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2803666.1"
                     /translation="MTRKVAIVTGASAGLGVEFARQLSARGHRLVLVARRKDRLEALA
                     AELGNARSVALDLAQGGAAAKLVANIESVGESVDLLVNNAGFGLHGRFDKSEPARLRE
                     MVDLNCGALTELCSAVLPAMIERRSGAILNVASTAAFQPGPGMAVYFATKAYVLSFTE
                     AIHEEAGRFGVRVTALCPGPTRTEFGEVAGFRGKKTLDRFFMEAEPVVRAGLKALDRN
                     KAVAIPGGLNRAIPFAIRLAPRSLVRKAAGRVKF"
     gene            complement(3113..3565)
                     /locus_tag="VHN55_06760"
     CDS             complement(3113..3565)
                     /locus_tag="VHN55_06760"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013848331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX2803667.1"
                     /translation="MADDRLTLSLSTGGDVVIKLRPDLAPEHVKRITDLANEGFYDGV
                     LFHRVIPGFMAQGGDPTGTGMGASQLPNLQAEFSDAPHVRGTASMARAQDPDSANSQF
                     FICTDDSRFLDGQYTVWGKVESGMEHVDALPTGEPPANPGKIVKATVS"
     gene            3674..5098
                     /gene="mgtE"
                     /locus_tag="VHN55_06765"
     CDS             3674..5098
                     /gene="mgtE"
                     /locus_tag="VHN55_06765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEX2803668.1"
                     /translation="MSESEKIAAALDADRLGATASSAIDEEDRLRPEFVDRVLDAVDA
                     GDDGTARELVAPLHPADVADLIELAARDERDGLVKALAEIVDAEVLAEMNEHVRETLL
                     DALGPDAVAKIAGDLETDDAVAIIEDLEEHEQRAVLSAMEPDDRAAVEEALTYPEESA
                     GRLMQRDLIAVPEHWTVGQVIDYLRSTDELPTDFWEIFVVGPSHHPVGTCKLSTVLRA
                     PRATPIADVMLRDQTLIPVDMDQEDVSLRFQKYALVSAAVVDGEGRLVGMITVDDIVH
                     IIQEEASEDVLLLSGVGDEGDINEPVGESYRARVRWLIANLLTALVGASVIRYYEGAI
                     ERLAVLAVLMPIVAGVGGNAGTQTLAVTVRALATNQLTGSNRWRAVGREIRVAVLNGL
                     TVALLIGVGVAVVLESGPLGALIAAAMLINIIVAGFAGVLVPLALERAGADPAVASSV
                     FVTMTTDSMGFLAVLGLATATGVV"
     gene            5138..5539
                     /locus_tag="VHN55_06770"
     CDS             5138..5539
                     /locus_tag="VHN55_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011543118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1489 family protein"
                     /protein_id="HEX2803669.1"
                     /translation="MPKLHLTKVAFGCRDVESLASRIASRSAGGELRVATRMRPRRDG
                     ELIGGNLYWIVKHRLVGGNAILRIEDRADGRIDIVCSAEFGTVTPTHCRAHQGWRYLA
                     DEDAPTAGSDGTGLAELPPRLYGRLAALALV"
     gene            complement(5553..5759)
                     /locus_tag="VHN55_06775"
     CDS             complement(5553..5759)
                     /locus_tag="VHN55_06775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803670.1"
                     /translation="MVVIACSLLTRSWLRGGGPLGKRGQCGFATQLNADLIVDETNNK
                     NGSETMYIGIGGLILLIILLVILL"
     gene            5749..6423
                     /locus_tag="VHN55_06780"
     CDS             5749..6423
                     /locus_tag="VHN55_06780"
                     /inference="COORDINATES: protein motif:HMM:TIGR04305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CADD family putative folate metabolism protein"
                     /protein_id="HEX2803671.1"
                     /translation="MTTTVSARIDSAVSARAMLSHPFYQAWTEGRLPLDTLRAYARQY
                     FHHVEAFPRAVSAVHSACPDRDGRRMLAENLAEEEGVEAGKQDHASLWLMFACGLGES
                     ETSVKAQQLNPETAALIDTFRRLSRKSYASGLGALYAYESQFPGVATAKIEGLVDRYG
                     ISDEETLRFFQVHATADVEHSAVCRTLLDRLPADERAEAIAAGEELAGALWNFLSGVE
                     ATASLN"
     gene            complement(6434..7132)
                     /locus_tag="VHN55_06785"
     CDS             complement(6434..7132)
                     /locus_tag="VHN55_06785"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HEX2803672.1"
                     /translation="MILRLLAAACAALSLATAASAAERNFTVTGFDRVRIDGPYRVRM
                     TTGVAPFAKASGSQSALDGVSVEVQGRTLIVHNNPRSWGGYPGESPGPVEISVGTHDL
                     SAVWVNGAGALAIDKARGQSLDLSVQGPGSISLGRAEVDRLRINMTGSGSAVVGGNAA
                     DASLFLRGSSSLDGSGLTVKDAKIGATGSAVVAVIATGTAKVDTSGTATVELGGNPAC
                     TVNASGSAVVRGCR"
     gene            complement(7169..>7625)
                     /locus_tag="VHN55_06790"
     CDS             complement(7169..>7625)
                     /locus_tag="VHN55_06790"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HEX2803673.1"
                     /translation="IFHWGSGMRGKATITVTAPALREASIAGSGGISVDKVTGDSFEG
                     SIAGSGDLNLDSLQVQSLKLSIAGSGDVRARSGQARNAAYSIAGSGGIDAAGVSSETA
                     DVSIAGSGGVRGQASGTADVSIMGSGDVELTGGAKCNVSKSGSGNVRCS"
BASE COUNT         1252 a         2584 c         2485 g         1304 t
ORIGIN      
        1 tccggtcggc cggacggcgt cgctcttcag tgtctcctgg attcggtcat attcttcgag
       61 catctgcgga gtgacggagg cgcgcgtctc ggacagcgcc gattcgaaat cctccttcgt
      121 caccttggca gcgtcgaggc cacggcgaag cgcggtcagc ccggccctcc ggaccaagtc
      181 ctccaggtcg gctccggtga accgctccgt gcgctgtgca agcgattcga gatcgacatc
      241 gttggcaagc ggcatgcccg acgtgtggat cgccaggatc cgccttcgcc cggcggtctc
      301 tggcggcgcg acatagatca gctcgtcaaa ccggccgggc cggagcaagg cgggatcgat
      361 caggcttggc cggttcgtgg cgccgatcag aacgacgttg ttcagctcct cgagcccgtc
      421 catctccgca aggatggtgt tgaccacgcg ctcggtcacc tgcggttcgc ccattccgcc
      481 gccgcgagcg ggaaccaggc tgtcgatctc gtcgatgaag atcaccgtcg gcgcgacctg
      541 gcgcgctcgc gcgaacaggc gagctatctg ctgctcgctc tcgccatacc atttcgacag
      601 gaggtcggac gatttggtgg cgatgaaatt ggcccggctt tcgcgagcag tcgccttggc
      661 gagcagggtc ttgcccgtcc cgggagcgcc gtagagcagg aagcctttcg ccgggcggat
      721 tccgattcgg cggaaagcct cggggtgctt gagcggaagc tcgatcccct cgcgtagctt
      781 ttccatcgcc acgtcgagtc cgccgatgtc cgaccagcgg atctccgggg cttcgaccat
      841 gacctcgcgc atcgccgacg gctgcactcg cttgagtgca ttttcgaagt cgagattttc
      901 gaccgaaagt gcatccagaa cctccgtcgg aatcgtgtct tcctcgggat tgatcctagg
      961 catgattcgt cgaacggcct ccatcgctgc ttcgcgggtc agggcggcga ggtcggcgcc
     1021 gacgaaacca taagtccggc gcgcgagctc ctggacatcg acgtcagccg acaaaggcat
     1081 tccgcgcgtg tggatctcca aaatctcgaa acgaccgcgc tcgtccggga cgccgacgac
     1141 gatctcccgg tcgaagcggc cggggcggcg aagcgcctcg tcgagcgcct cgggccggtt
     1201 ggtcgcggcg atgacgacga ggttctgcct gggctcgatc ccgtccatca ggctcaggag
     1261 ctgcgcgacc agtcgcttct cggcctcgcc ctgcacctgc ccgcgcttgg gagcgatcga
     1321 gtcgatctcg tcgatgaaaa tgatcgccgg cgcggcggcc gcggcctgct cgaacaattc
     1381 gcgaagcttg cgctcgctct cgccataagc cgagcccatg atctccgggc cggcgatgga
     1441 aaagaaattg gcactgcttt cgttggcaac ggcccgagcc agccgggtct tgccggtgcc
     1501 cggcgggccg tggagcagca cgcccttggg cgggtcgact ccgaggcgct ggaaaagctc
     1561 gggatggcga agcgggagct cgaccatctc gcggagcgcg tcgatcgttc cgtgaagccc
     1621 gccgaggtcg tcgtaggtga cgtcggcacg gcggtcgccg ggctcgccgc cgaggaattc
     1681 ggggagcagt tcgacattgg tatttgcgtc gatgtggacg attcccttgg gaaccgccgt
     1741 gacaaccttc agccgcactt cctgcagcgc gaaggcgggc gcgttcagca tctggcgcac
     1801 ctggtcgggc atattggcat tgacccgctg gtgaccggcc gtcgcaacgg tatcaccttc
     1861 gcaaagcggt cgccccgcaa aggtgcgctt cagcgccccc gcggagccct ggagccggat
     1921 attgtcctgg gcgggcgcga agaccacgcg cgtcgcggcc ttcgacttgg ccttgcgcac
     1981 ttcgacgaaa tcgccggagc cgacaccggc attggcgcgc gacaggccgt cgaggcggat
     2041 gatctccagg ccttcgtcct cgccataggg gcggatcgcg cgcgcggcgg tggaccgctt
     2101 tccgacaatc tctatggtat cgccctcgtt gagcgagaga tccttcatca gcttcactgg
     2161 gagccgggca attccacggc cgctgtcgcc aggcggaagg ctcgcaacct ggacgcgcct
     2221 cgtcttcggc cgctctgcca cgtcagtgtc cgccattgga tctcctctca cccgctcgtg
     2281 cgcccaaccg aaacggaaac gggcctgtcg agttcaattg gggcgccgct gtgcgcgtta
     2341 aaagcccccc gatcaaaact tgaccctccc ggccgccttg cgaacgagcg agcgcggcgc
     2401 gaggcgtatg gcgaagggga tagcccggtt caggccgccg gggatcgcaa ccgccttgtt
     2461 gcggtcgagc gcctttagcc ctgccctgac gaccggctcc gcttccatga agaagcggtc
     2521 gagcgtcttt ttgcccctga atcccgccac ctccccgaac tcggtcctcg taggtcccgg
     2581 gcaaagcgcc gtgacccgca cgccgaacct gcccgcttcc tcgtgaatcg cttcggtgaa
     2641 cgacaggaca taagccttgg tcgcgaaata gaccgccatc cccggtcccg gctgaaaggc
     2701 cgccgtcgag gcgacgttga gaatcgcgcc cgaacggcgt tcgatcatcg ccggcagcac
     2761 cgcgctgcac aattcggtga gcgcgccaca attaaggtcg accatctcgc ggagacgggc
     2821 gggctctgac ttgtcgaagc ggccatgaag cccgaagccg gcgttgttca ccagcaggtc
     2881 gacgctttcg cccacggact cgatgttcgc gaccagcttg gcggccgccc cgccttgggc
     2941 aaggtccagc gccacgctgc gcgcattgcc gagctcagcc gcaagcgcct ccagccggtc
     3001 cttgcgccgc gctacgagca ccaggcgatg gccgcgcgcc gacaattggc gggcgaattc
     3061 cactccaagc cccgccgagg cgccggtgac gattgcgacc ttgcgggtca tctcacgaga
     3121 cggtcgcctt gacgatcttg cccggattgg ccggaggttc gcccgtgggc agcgcatcga
     3181 catgctccat cccgctctcg acctttcccc agactgtgta ctggccgtcg aggaagcgcg
     3241 aatcgtcggt gcagatgaag aactggctgt tggcgctgtc ggggtcctgc gcgcgcgcca
     3301 tcgacgcggt cccgcggaca tgcggcgcgt cggagaactc cgcctgcagg ttgggaagct
     3361 gcgatgcgcc catcccggtt ccggtcggat ctcccccctg ggccatgaag cccgggatca
     3421 cccggtggaa aaggacaccg tcgtaaaagc cctcgttggc gaggtcggtg attcgcttga
     3481 catgctcggg cgcaaggtcg gggcgaagct tgatgacgac atcgccgccg gtggaaaggg
     3541 aaagggtcag ccggtcgtca gccatgaaga tgctcctgtc gctactggat cggcgcgatc
     3601 taggcgcgca gcgatgcttg cgccagactc cgtccgacaa taggagggcg gcaagcgttg
     3661 ggagggtgac ggcatgagcg aaagcgagaa gatcgccgcc gccctcgatg ccgaccgctt
     3721 gggcgccacc gcgtcctccg caatcgacga ggaagaccgc ctccggccag agttcgtcga
     3781 ccgggtcctc gacgccgtcg atgccggcga cgacgggacc gctcgcgagc ttgttgcacc
     3841 gctccacccc gccgacgtcg ccgacctgat cgagctcgcc gcccgcgacg agcgcgacgg
     3901 gctggtcaag gccctcgccg agatcgtcga cgcggaagtg cttgccgaga tgaacgagca
     3961 cgttcgcgag acattgctcg acgcgctcgg gcccgacgcg gtggcgaaga tcgccggcga
     4021 tctcgaaacg gacgacgccg tcgcgatcat cgaggacctc gaggagcacg agcagcgtgc
     4081 cgtgctcagc gcgatggagc cggacgaccg ggcggcggtc gaggaggctc tgacctaccc
     4141 ggaggaatcg gccggccgcc tgatgcagcg cgacctgatc gcggtgccgg agcattggac
     4201 cgtcggccag gtcatcgact atttgcgctc gaccgacgag cttccgaccg atttctggga
     4261 aatcttcgtg gtcggcccaa gccaccaccc ggtcggaacg tgcaagcttt ccaccgtcct
     4321 tcgagcgcct cgcgccaccc cgatcgccga tgtcatgctc cgcgaccaga cgctgatccc
     4381 ggtcgacatg gaccaggaag acgtgtcgct gaggttccag aaatatgcgc tggtgtccgc
     4441 ggccgtggtc gacggcgagg gccggctcgt cggaatgatc accgtcgacg acatcgtcca
     4501 catcatccag gaagaagcga gcgaggacgt ccttcttctg tcgggtgtcg gcgatgaggg
     4561 cgatatcaac gagccggtcg gcgaaagcta tcgcgcccga gtccgctggc tgatcgcaaa
     4621 cctcctcacc gcgctcgtcg gagcctcggt gatccgctat tacgaaggcg cgatcgagcg
     4681 cctggccgtt ctcgcggtgc tgatgccgat cgtcgccgga gtcggcggca acgccgggac
     4741 ccagaccctc gcggtcacgg tgcgcgcgct tgctactaac caattgaccg gctccaaccg
     4801 ctggcgcgcc gtcggcaggg aaatccgggt cgcggtgctg aacgggctga ccgtcgcgct
     4861 tctcatcgga gtgggggtcg cggtggtgct cgagagtggc ccgctcggag cgctgatcgc
     4921 ggcggcgatg ctcatcaata tcatcgtcgc ggggttcgcc ggcgtcctcg ttccgctcgc
     4981 gctcgaacgc gccggcgccg atccggccgt ggccagcagc gtgttcgtaa cgatgacgac
     5041 ggactcgatg ggctttctgg cggtgctcgg cctcgcgacc gctaccggag tcgtctaagc
     5101 ggttgcgatt cctgcgctaa gtcgccactc cagcgacgtg ccgaaactgc atttgaccaa
     5161 ggtcgccttt ggctgccgcg acgtggaatc gcttgcctcc cgaatagcgt cgcgttcggc
     5221 cggcggagag cttcgggtgg cgactcgaat gcggccgcgc cgcgacggcg agctgatcgg
     5281 cggcaacctc tattggatcg tcaagcaccg cctggtcggc ggcaatgcaa ttcttcggat
     5341 cgaggatcgc gccgacgggc gaatcgacat cgtctgctcg gcggaattcg gaacggttac
     5401 gcccacgcac tgccgcgccc atcaagggtg gcgttacctg gccgatgaag atgcgccaac
     5461 agccgggagc gacggcaccg gcctcgccga actgccgccc cggctgtacg gccgactggc
     5521 cgcgttggct ttggtctgac tggctcctgc gctcagagca ggatgacgag caggatgatc
     5581 agaaggatca ggccgccgat accgatatac atagtttcgc tcccgttttt gttgttcgtt
     5641 tcgtcaacga tcaggtccgc attcagttgc gtcgcaaagc cgcattgtcc gcgcttgccg
     5701 agcggcccgc ccccgcgtaa ccagcttcgc gtcaacaggg agcacgcaat gaccaccaca
     5761 gtatcagccc gaatcgattc cgccgtctcc gcgcgggcga tgctcagcca tcccttctac
     5821 caggcgtgga ccgaaggccg cctcccgctc gatacgctgc gcgcttatgc ccgccagtat
     5881 ttccaccacg tcgaggcctt tccgcgcgcc gtcagcgcgg ttcacagcgc ctgccccgac
     5941 cgcgacggcc gccggatgct ggccgaaaac ctcgccgagg aagaaggcgt cgaagcgggc
     6001 aagcaggacc atgcgtcctt gtggctgatg ttcgcctgcg gcctcggcga aagcgaaacg
     6061 tcggtgaagg cgcagcagct caaccccgag accgccgccc tgatcgacac gttccgccgc
     6121 ctctcgcgca agtcctacgc gtcgggactc ggcgcgctct acgcctacga atcgcaattc
     6181 ccgggagtcg caaccgccaa gatcgagggc ctggtcgacc gctacgggat cagcgacgag
     6241 gagacgctgc gcttcttcca ggtccacgcg accgccgacg tcgagcatag cgcggtgtgc
     6301 cggacgctcc tcgaccggct tcccgccgac gagcgcgccg aggcgatcgc ggccggcgag
     6361 gagcttgccg gcgcgctgtg gaatttcctg tcgggagtcg aagcgacagc gtcgctgaac
     6421 taggacgtca gcgtcagcgg cagcctctga cgacggcgga gcccgaagcg ttgacggtgc
     6481 acgcggggtt tccgcccagt tccaccgttg ccgtgccgga ggtgtcgacc ttggcggtcc
     6541 cggtcgcgat gaccgcgacg acggccgatc cggtggcgcc gatcttggca tccttcaccg
     6601 tcagcccgga accgtcgagc gacgatgatc cgcgcaggaa caggctggcg tccgccgcat
     6661 ttccgccgac gaccgccgac ccgctcccgg tcatgttgat tcgcagccgg tcgacctcgg
     6721 ctcgcccgag cgaaatcgat ccgggcccct ggaccgacag gtccagcgac tgtcccctgg
     6781 ccttgtcgat ggccagcgct ccggccccat tgacccacac cgccgacaaa tcgtgggttc
     6841 cgacgctgat ctccacgggc cccgggcttt ccccgggata gccgccccaa ctgcgcggat
     6901 tgttgtggac gatcagggtc cggccctgga cctcgaccga gactccgtcg agtgccgact
     6961 gcgatccgct cgccttcgcg aacggcgcca ccccggtcgt catcctgacc cggtaaggcc
     7021 cgtcgatccg aacccggtcg aagccggtga cggtgaagtt gcgctcggcg gcgctcgccg
     7081 ctgtggcaag cgagagggcg gcgcaggcgg cggcgagaag gcgaaggatc attcctccac
     7141 cttctctccc ggcatggtta aaacctcctt aagagcagcg gacgttgccc gatccggact
     7201 tgctgacgtt gcacttcgcg ccgccggtca attcgacatc gcccgaaccc atgatgctga
     7261 cgtcggcggt accgctggcc tggccccgga ctccacccga gccggcaatc gacacgtcgg
     7321 cggtctccga gctcactcca gcagcgtcga ttccgcccga tccggcgatc gaataagcgg
     7381 cgttgcgggc ctgtcccgag cgggcgcgaa cgtcgcccga gccggcaatg gacagcttga
     7441 gcgattgcac ctgcagcgag tcgagattga ggtcgcccga tccggcgatg cttccctcga
     7501 atgagtcgcc cgtgaccttg tcgacgctga ttcctcccga gccggcgatc gacgcctctc
     7561 gcaaggctgg agcggtcacg gtgatcgtcg ccttgccgcg catcccggag ccccagtgga
     7621 aaatg
//
LOCUS       DATAKH010000164         3382 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_22030,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000164 DATAKH010000000
VERSION     DATAKH010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22030"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1590)
                     /locus_tag="VHN55_06795"
     CDS             complement(<1..1590)
                     /locus_tag="VHN55_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007012658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2803674.1"
                     /translation="MNFRNISAWSIRNPIPPIVLFIGLTLAGIVAFMRMDVQDSPDIE
                     FPVVIASISQPGAAPTEIENQITQKVEASVRTLPGVRNISSTANEGSSQTVVEFELGT
                     DVDQSVNDVKNAIDQIRGELPDGILEPFIQKETTSSNPIAYFAVSAPDMTIEQLSWFV
                     DDTVAKRLLAVEGMAKVERNGGVDREIRVILDPARMQSLGVTAAQVNAALRQLNVNAS
                     GGRTEIAGSRQSVRVLGNAADAYALSQTQISLSGGRTVQLGDVATVSDSYGEQTRIGK
                     IRGGQVVNFSMARAKGASDVSVYDDAVEMLDKIEEENPGVEFTQLFTSVDYTKQQYES
                     SMMAMIEGALLAVLVVFIFLRDIRATAIAAIAIPLSAIPAFWFMELMGITLNSLSLLA
                     LGLVAGVLVDDAIVEIENIVRHMRMGKSAYQASIDAADEIGLAVLATTMSIVAVFLPV
                     ALMPGISGQFFKNFGYTVVLAVLMSLFVARMITPMIAAYFLKAKGHQSHGEGWLMDRY
                     MDVLHWSLDATKARAMRRQLEP"
     gene            complement(1615..2802)
                     /locus_tag="VHN55_06800"
     CDS             complement(1615..2802)
                     /locus_tag="VHN55_06800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX2803675.1"
                     /translation="MNRETPIRTSDSDTLVVVDDGGARRKRIAIIGAALVALVAILLA
                     VMMFSGEDKPAAGGAEGQGNKSQAPTVTVVVPGRQAVQRTISATGSVAARVDMPVGVA
                     GEGGKVTRVLVQPGQWVRAGQPLAVIERAVQAQEAAQLAAQVQVARADADLAQNELDR
                     AQALVGRGFISKADVDRKRAARDAAAARVRVAQAQLNAARARIGRLDVRAPAGGLVLE
                     RNVEPGQVVSAGSGALFRIAQGGSMELLARLSEADLADIHVGAPAKVTPVGSERSFTG
                     SVWQISPIVDEQNRQGVARVAVPYDPALRPGGFASVELVAGTQQAPVLPESAILSDDR
                     GTYVYIVTRDNKVERRPVKTGAVTSAGIAIIEGLSGQENVVLRAGGFLNPGETVKPQR
                     RAS"
     gene            3012..3275
                     /locus_tag="VHN55_06805"
     CDS             3012..3275
                     /locus_tag="VHN55_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX2803676.1"
                     /translation="MLESYSWLWWIIIGGLAGGIAKLLMPGRDPGGCLVTILLGIAGA
                     FIAGWLGHAVGWYENGEGAGFIAAIVGAFIILGLYRLIVSRRT"
BASE COUNT          600 a         1086 c         1071 g          625 t
ORIGIN      
        1 cggctcgagc tgccttcgca tcgcccgcgc cttggtcgcg tcgagcgacc agtgcaggac
       61 gtccatgtat cggtccatca gccagccttc gccgtgcgac tggtgacctt ttgccttgag
      121 gaaataggcg gcaatcatcg gcgtgatcat tcgcgcgacg aacaagctca tcagcaccgc
      181 gaggacgacc gtgtagccga agttcttgaa gaactggccg gagattcccg gcatcagagc
      241 taccgggagg aacacggcca cgatcgacat cgtcgttgcg aggaccgcaa ggccgatctc
      301 gtcggctgcg tcgatggagg cctggtatgc cgattttccc atccgcatgt ggcggacgat
      361 attctcgatc tcgacgatcg cgtcgtcgac gagcacgccg gcgacgagtc caagtgcgag
      421 cagggacagc gaattgagag tgatccccat cagctccatg aaccagaagg cggggatcgc
      481 cgagagcggg atcgcgatcg cggcgatggc ggtcgcgcgg atgtcgcgga ggaagatgaa
      541 gacgacgaga acggcgagga gggcgccttc gatcatcgcc atcatcgagc tctcgtactg
      601 ctgcttggtg taatcgacgc tggtaaagag ctgggtgaac tcgacccccg gattctcctc
      661 ctcgatcttg tcgagcatct ccacggcatc gtcgtagaca ctgacgtcgg acgcgccttt
      721 cgcgcgcgcc atcgagaagt tgaccacctg gccgccgcga atcttgccaa tccgcgtctg
      781 ctcgccatag ctgtcgctga ccgttgcgac atcgccaagc tggacggtcc ggccgccaga
      841 cagcgaaatc tgggtttgcg agagggcgta agcgtccgct gcgttaccga gcacccggac
      901 cgactgccgc gacccggcaa tctccgtccg cccgcccgat gcattgacgt tgagctggcg
      961 aagggccgcg ttgacctgcg ccgcggttac cccgagcgac tgcatccgag cggggtcgag
     1021 aatgacccgg atttcgcgat ccaccccgcc gttgcgctcg accttggcca ttccttcgac
     1081 cgcgaggagc cgcttggcga cggtatcgtc gacgaaccag ctgagctgct cgatcgtcat
     1141 gtccggagcg gaaaccgcga aataggcgat cggattgctg gacgtcgtct ccttctggat
     1201 gaagggctcg agaatcccgt caggcaattc gccgcggatc tggtcgatcg cgttctttac
     1261 gtcgttgacg gattgatcga cgtcggtgcc gagctcgaac tcgaccactg tctgcgacga
     1321 accttcgttc gcggtcgagc tgatgttgcg aacgcccggc agcgtccgga ccgacgcctc
     1381 caccttttgc gttatctggt tttcgatttc cgtcggcgcc gcgccgggct gcgagatgct
     1441 cgctatcacg accgggaact caatgtccgg gctgtcctgg acgtccattc gcatgaaggc
     1501 gacgatcccc gccagggtaa gaccgatgaa cagcacgatc ggagggatcg ggttgcgaat
     1561 cgaccatgcg gagatgtttc tgaagttcat tcgatcagtc caaaaatggc cggcttagct
     1621 cgcccgccgc tgcggcttga cggtttcgcc ggggttgagg aagccgccgg cgcgaagcac
     1681 gacgttctcc tggcccgaga gaccttcgat gattgcgatc ccggcggaag tgacggcacc
     1741 ggtcttgacc ggccgccgct ccaccttgtt gtcgcgggtg acgatgtaga cgtaggtccc
     1801 gcggtcgtcg ctgaggattg ccgattccgg cagcaccgga gcctgttgcg ttccggcgac
     1861 gagctcgaca ctcgcgaagc cgccgggccg gagcgccgga tcatagggaa ccgcgacccg
     1921 ggcgacgccc tgccggttct gctcgtcaac gatcggcgaa atctgccaca ccgaaccggt
     1981 gaagctgcgc tcgcttccga ccggagtcac cttcgccggc gctccgacgt gaatgtcggc
     2041 aaggtcggcc tcgctgagcc gggcaagcaa ctccatggag cctccctggg cgatccggaa
     2101 aagcgccccg gaaccggcgc tgactacctg ccccggctcg acgttccgtt cgaggaccag
     2161 gccgcccgca ggggcccgga cgtcgagacg gccgattcgc gcccgcgcgg cattgagctg
     2221 ggcctgcgca acccgaacac gagcggctgc ggcatccctt gccgcgcgct tccggtcgac
     2281 gtccgccttc gaaatgaagc cccgcccgac cagcgcctgg gcccggtcga gttcgttttg
     2341 cgcaaggtcg gcatcggctc gggcaacctg aacctgcgcg gcgagctgcg ccgcttcctg
     2401 ggcctgaacc gcgcgttcga tgacggcgag aggctggccc gccctgaccc attgtccggg
     2461 ctggacgaga actcgggtta ccttaccgcc ctcgccggcg acgcccacgg gcatatcgac
     2521 acgagccgca accgaccccg ttgccgagat cgtccgctga accgcttgcc tgcccggaac
     2581 aaccacggtc acggtcggtg cctggctctt gttgccctgg ccctcggctc ccccggcggc
     2641 cggcttgtcc tcgcctgaga acatcatcac ggcgagcagg attgcgacga gcgccaccag
     2701 cgcggcgccg atgatcgcaa tccgcttccg gcgggcgccg ccgtcgtcaa cgacaacaag
     2761 cgtatccgaa tcggatgtcc gaatgggggt ttcccggttc atttcaagca tctttcgtct
     2821 tgcccgcccc ctgagcggtc atgtttggag taactgtatt acgcgaataa ctcaccaaga
     2881 gcaacacaac gcccgtggga attgatgcgc cagcaatttt ctacgaacag cggcacttga
     2941 acagcgaaag cgcgttggcg cattcgatgg gggcggcttt ggccgaccga ttgcgaaaag
     3001 gggaagcgac aatgttggag tcctatagct ggctgtggtg gatcatcatc ggcggcctcg
     3061 ccggcggaat tgccaagctg ctgatgccgg gacgggatcc gggcggctgc ctcgtcacca
     3121 tcctgctcgg aatcgcgggc gcattcatcg ccggctggct tggccatgcc gtcgggtggt
     3181 acgaaaatgg cgagggcgcg ggattcattg ccgccatcgt cggcgctttc atcattctcg
     3241 gactctatcg cctgattgtc agtcgccgga cgtaaatccg tcgcgcgtgc ccattcaggc
     3301 gcgagccata tcggtatggc aattccctga tgcaacgatg gtcgacaagg gaatgactcg
     3361 atgaagacga tttacgtcgc cg
//
LOCUS       DATAKH010000165         3063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_10979,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000165 DATAKH010000000
VERSION     DATAKH010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10979"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..894
                     /locus_tag="VHN55_06810"
     CDS             79..894
                     /locus_tag="VHN55_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017666712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX2803677.1"
                     /translation="MNRVESMNRGMAGLSALDSLEIPSLEGKVSDEEWAIRVDLAAAY
                     RMVAHYGWDDLIFTHLSARIPGPEHHFLLNPYQLMFEEVTASSLVKVDVQGNPVDPTP
                     FITNPAGFTIHSAIHMAREDALAVMHLHTPAGQAVAAHSEGLLPLTQTAMLVRQDIAF
                     HDYEGVAVDLDERERLVANLGDKGGLILRNHGTLAVGKSVGECFVKLYFLERACQAQV
                     MALSAGENVNMPPQGAPEVTAEQGAAGLSVAANLLAWPALKRKAYRLDPGFAT"
     gene            896..2047
                     /locus_tag="VHN55_06815"
     CDS             896..2047
                     /locus_tag="VHN55_06815"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEX2803678.1"
                     /translation="MPRGAASVGDYRALAKARLPHFLFEYLDGGSYAEVTLERNIADL
                     EAVALRQRVLRDVSKIDIAAELFGRRWAMPVGLGPIGLSGLYARRGEVQARRAAAEAG
                     VPFTLSTLSACSTGEVAQRAEPGFWFQLYIVKDRGFVSDMIAQAKAAQCGAILLTVDL
                     AVPGTRYRDYRAGLSSAPGESGGSRRLWQVLGRPGWAWDVAMLGRPMTLGNLEPLLGS
                     GAALGDLMGWVAANFDSSVTWKDVEWIRSQWDGPLVIKGILDPDDAREAVVRGLDGIV
                     VSNHGGRQLDGVSSTARALPRVAEAVGGKVPLLVDGGVRSGLDVVRMLALGADFVLLG
                     RAWAYALAAAGERGVAHVLKLVEEEIRVAMALTGTTRIGDIGAGTLDRS"
     gene            complement(2124..2200)
                     /locus_tag="VHN55_06820"
     tRNA            complement(2124..2200)
                     /locus_tag="VHN55_06820"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2164..2166),aa:Pro,seq:cgg)
     gene            complement(2291..>3063)
                     /locus_tag="VHN55_06825"
     CDS             complement(2291..>3063)
                     /locus_tag="VHN55_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010215645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HEX2803679.1"
                     /translation="DASPISAVTILGRRGPLQISMTPKELGELGHLDASTPVVDAADF
                     PPDEADEALEPGQRKSVSILREFAADGPDGSKSTRMIFDFFAKPLRIEGEGKAERIIV
                     ERTKLDAEGRAAGTGETYEVPASLVITSIGYSTPPMEGVPYDESGGKFLNENGKIDDR
                     LYCVGWARRGPTGTIGTNRPDGYEVAARIEGEMPPGSSSNRRGAEGLKALLGERGVMP
                     TDYDDWRKIERTETERARPGAPREKFVRAEDWLKVVGR"
BASE COUNT          480 a         1017 c         1042 g          524 t
ORIGIN      
        1 cctggttcgc gcggactcca acgctacggc gcttcccgct ttcgcggccg cgcacccgga
       61 gcagcaggag gcgatggcat gaaccgggtc gagagcatga accgcgggat ggcgggcctg
      121 tccgcgctcg attcgctgga aatcccgtcg cttgaaggca aggtcagcga cgaggaatgg
      181 gcgatccggg tcgatctcgc cgccgcctac cggatggtcg cgcattacgg ctgggacgac
      241 ctcatcttca cccatttgtc ggcgcggatc ccggggccgg agcaccattt cctgctcaat
      301 ccctaccagc tgatgttcga ggaggttacc gcctcgtcgc tggtcaaggt cgatgtccag
      361 ggcaatccgg tcgaccccac gcccttcatc accaacccgg ccggtttcac gatccactcc
      421 gcgatccaca tggcgcgcga ggacgcgctt gctgtgatgc acctgcacac accggcgggc
      481 caggccgtcg ctgcgcactc ggaagggcta ctgccgctga cccagacggc aatgctggtg
      541 cgccaggaca tcgccttcca cgattacgag ggcgtcgcag tcgacctcga cgagcgcgag
      601 cggctggtcg caaacctcgg cgacaagggc gggctgatcc ttcgcaacca cggcacgctg
      661 gcggtcggca agtcggtcgg agaatgtttc gtgaagctct atttcctcga gcgcgcctgc
      721 caggcgcagg tgatggcgtt gtcggccggc gagaacgtca acatgccgcc tcagggcgcg
      781 cccgaagtga ccgccgagca gggtgcggcc ggcctcagcg tcgccgccaa tttgctcgcc
      841 tggccggcgc tcaagcgcaa ggcgtaccgg ctggacccgg ggttcgcgac ctagggtgcc
      901 gaggggggcg gcaagcgtcg gcgattaccg cgcgctcgcc aaggcgcggc ttccgcattt
      961 cctgttcgaa tatctcgacg gcggttccta cgccgaggtg acactggagc ggaacatcgc
     1021 cgacctcgaa gctgtcgcgc tccgccagcg ggtgcttcgc gacgtttcga aaatcgacat
     1081 cgctgcggaa ctgttcggca ggcgctgggc aatgccggtg gggcttgggc cgatcgggct
     1141 gtcgggcctc tatgcacgcc gcggcgaggt gcaggcgcga cgggcggccg ccgaagccgg
     1201 ggtcccgttc acgctgtcga cgttgagcgc ctgctcgacc ggcgaagtgg cgcaaagggc
     1261 cgagccaggc ttctggttcc agctctacat cgtcaaggac cggggcttcg tttccgacat
     1321 gatcgcccaa gcgaaggccg cgcaatgcgg ggcgatcctg ctcaccgtcg acctcgccgt
     1381 ccctgggacc cgttaccgcg actatcgcgc cggcttgtcg agcgcgcccg gagagagcgg
     1441 cggttcgcgg cggctgtggc aggtgctcgg gcgtcccggc tgggcgtggg acgtggcgat
     1501 gctcgggcgc ccgatgacgc tcggcaatct ggaaccgctg ctcgggtccg gagccgcgct
     1561 cggcgacctg atgggctggg tcgccgccaa cttcgattcc agcgtcacct ggaaggatgt
     1621 cgaatggatt cgaagccaat gggacggccc gctggtcatc aagggcattc tcgatcctga
     1681 cgacgcgcgg gaggcggtcg ttcgagggtt ggacggaatc gtcgtttcga accacggcgg
     1741 ccgccagctc gacggggtca gctcgacggc ccgcgcgctc ccgcgggtgg cggaagccgt
     1801 cggcggcaag gtgccgctgc tcgtcgacgg cggagtgcgt tccgggctgg acgtcgtgcg
     1861 gatgctcgcg cttggggccg atttcgtcct cctcggccgc gcctgggcct atgccctggc
     1921 agccgccggc gaacggggag tcgcccatgt actgaagctc gtcgaggagg aaatccgggt
     1981 agcgatggcg ctgacgggga cgacaagaat cggcgacatc ggagcgggga cgctcgatcg
     2041 gtcgtaacgg catgtgctgc tcgacacgac attcgtcgga gctttggctt tcagccgtcc
     2101 cccggacggc cgaaaggcaa agctggtcgg ggagagagga ttcgaacctc cggcccctgc
     2161 ctcccgaaga cagtgctcta ccaggctgag ctactccccg accggaaccc gccccaagcg
     2221 acatgcggtc gcggcgggag ccaaggccgc ggctagatag aggtgggtgg gctccagcgc
     2281 aaccgacgaa ttagcggccg accactttca gccagtcctc ggcgcgaacg aacttctccc
     2341 ggggcgctcc cgggcgcgcc cgttccgtct cggtccgctc gatctttcgc caatcgtcat
     2401 agtcggtcgg catcacgccg cgctcgccga gcaacgcctt cagcccttcc gcccccctgc
     2461 ggttgctgga gcttccgggc ggcatctcgc cttcgatccg agcggccact tcatagccgt
     2521 cggggcggtt ggtcccgatg gttccggtcg gaccccggcg agcccatccg acgcaataga
     2581 gcctgtcgtc tatcttaccg ttttcgttga ggaatttgcc gccgctttcg tcgtacggga
     2641 cgccttccat cggcggcgtc gaatagccga tggaggtgat caccagcgat gccggcacct
     2701 cgtaggtttc gccggttccg gcggctcggc cctccgcgtc gagcttcgtc cgctcaacga
     2761 taatacgctc cgccttgccc tcaccttcga tgcgaagcgg cttggcaaag aagtcgaaga
     2821 tcatccgcgt cgatttcgaa ccgtcgggcc cgtcggccgc gaattcgcgc aagatcgaaa
     2881 cggacttgcg ctgccccggc tcgagcgcct catcggcctc atccggcgga aaatcggccg
     2941 cgtcgactac gggcgtcgaa gcatcgagat ggccgagctc gccaagttct ttcggagtca
     3001 tcgagatctg cagcggcccg cggcggccga ggatggtgac ggcgctgatc ggcgaagcat
     3061 cga
//
LOCUS       DATAKH010000166         1921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_11045,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000166 DATAKH010000000
VERSION     DATAKH010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11045"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VHN55_06830"
     CDS             complement(<1..193)
                     /locus_tag="VHN55_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2803680.1"
                     /translation="MIPGEELLFCALGGSGEIGMNVNLYGCRGQWLMVDLGLTFADTY
                     YPGIDLILPELEFIERQQDR"
     gene            complement(190..972)
                     /locus_tag="VHN55_06835"
     CDS             complement(190..972)
                     /locus_tag="VHN55_06835"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016746451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEX2803681.1"
                     /translation="MLLAIDAGNTNIVFALVDGGEIRGRWRIATDPRRTADQYSVWLY
                     QLLALEGLSKDDVDAVIIGTVVPRALHNLEVLSIKYFGVKPLVAGQGEAGWPMALDVD
                     EPHNVGADRALNAIAAHARHEGDLIIVDFGTATTFDLVGSDGAYKGGIIAPGINLSID
                     ALVNAAAKLPRIAIEAPADDSVVGRTTESQMLIGIYWGYVAMMEGLIARMKAQVGREV
                     TVVGTGGLAALFDKRTDIFDAVEPDLTIQGLSLLYEGLSAGE"
     gene            complement(975..1676)
                     /locus_tag="VHN55_06840"
     CDS             complement(975..1676)
                     /locus_tag="VHN55_06840"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019367948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEX2803682.1"
                     /translation="MAVLSRIRIVETTGSTNADLLADSSAVEGDWLVALEQTAGRGRQ
                     GREWLTKAGNFFGSTLVEIASSDPPAQSLSLASGLALIEAVDAAAPGLPLLLKWPNDL
                     LLDSAKLGGILLERAGDRVVIGFGVNLVAAPEIPDRPAAHLGGRVSPQAFAPLLAGAM
                     SRMVALWRSARPTEFASAWLARAHPVGSQLSVHGSDAGAVHGRFEGIDPDGTLQLRLP
                     DGSVRAIHAADVTLG"
     gene            complement(1664..>1921)
                     /locus_tag="VHN55_06845"
     CDS             complement(1664..>1921)
                     /locus_tag="VHN55_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEX2803683.1"
                     /translation="FNAAVEAGLLALAVAGILGTVVGAYYYLKVVKIMYFDDPAAPYA
                     RHRAPVEGLLMLIAALLVSPLGYLLIGPLGSMTDRAAGSLF"
BASE COUNT          357 a          644 c          597 g          323 t
ORIGIN      
        1 gccggtcctg ctgccgctcg atgaactcca gctccgggag gatcaggtcg attccgggat
       61 aataggtgtc ggcgaaggtg aggccgagat cgaccatcag ccactggccg cggcagccat
      121 agagattgac gttcatgccg atttcgcccg agccgccgag cgcgcagaac agcagttctt
      181 ctccgggaat cattcgcccg ccgacagtcc ttcgtacagg agactcaacc cctgtatcgt
      241 caaatcgggt tcaacagcgt cgaagatgtc ggtccgcttg tcgaacaggg cggcgagccc
      301 gccggtgccg acgacggtaa cttcgcgccc gacttgcgcc ttcatccggg ctatcagccc
      361 ttccatcatc gccacataac cccagtagat gcctatcagc atctggcttt cggtggtccg
      421 gccgacaacg ctgtcgtccg cgggcgcctc gatcgcgatc cggggaagct ttgcggctgc
      481 attgaccagc gcgtcgatcg acaggttgat tccgggagcg atgatcccgc ccttgtaagc
      541 gccatcgctg ccgacgaggt cgaaagtcgt cgcggtcccg aaatcgacga tgatcaaatc
      601 gccttcgtgc cgggcgtggg cggcgattgc gttgagggca cggtcggcac cgacattgtg
      661 cggctcgtcg acgtccaggg ccatcggcca gccggcctcg ccctgccccg cgaccagcgg
      721 cttcaccccg aaatatttga ttgagaggac ctccaggttg tgaagcgcgc gcggcacaac
      781 cgtgccgatg atcaccgcgt ccacatcgtc cttggacagg ccttccagcg ccagcagctg
      841 gtaaagccac accgaatatt gatcggccgt ccgccgcggg tcggtcgcga ttcgccagcg
      901 cccgcgaatc tcgccgccgt ccaccagcgc gaagacgata ttcgtgtttc cggcatcgat
      961 ggcgagaagc atgtctatcc cagggtcacg tcggcggcgt gaatggcacg gacgcttccg
     1021 tcgggcaaac gcagctgaag ggtgccgtcc gggtcgattc cttcaaaacg gccgtgcacc
     1081 gccccggcgt cggagccgtg aacggaaagc tggctgccca ccgggtgcgc tctcgccagc
     1141 catgcgctgg cgaactccgt cggccgcgca gaccgccaca aggccaccat tcggctcatc
     1201 gctccggcaa gcaacggtgc gaaggcctgc ggcgaaacac gccccccaag gtgcgctgcc
     1261 gggcgatcgg gaatttctgg agccgccacg agattgaccc cgaagcctat gacgacgcgg
     1321 tcgcccgccc gctcgagcag gattccgccc aactttgctg agtcgaggag caagtcgttg
     1381 ggccatttga gcaacagcgg aaggccgggc gcggcggcat cgacggcttc gatcagcgca
     1441 agccctgaag cgagggagag cgactgtgcc ggaggatcgc tgcttgcgat ctctacaagg
     1501 gtgcttccga agaaattgcc ggccttggtc agccactcgc gcccctggcg gccccttccc
     1561 gccgtctgtt ccagcgcgac gagccaatcc ccctcgaccg cagagctatc cgccaacaga
     1621 tccgcgttgg ttgagccggt ggtctcgacg atccggattc ggctcagaac agcgatcccg
     1681 ccgcgcggtc tgtcatggag ccgagcggtc cgatgagtaa gtagccgagc ggcgagacga
     1741 gcagcgccgc aatcagcatc agcaacccct caaccggcgc tcgatggcgc gcgtaaggcg
     1801 ccgccggatc atcgaaatac atgatcttga cgaccttgag gtagtagtat gcgccgacca
     1861 cggtgccgag gattcctgca accgccagcg ccagaagccc cgcctccacc gcggcgttga
     1921 a
//
LOCUS       DATAKH010000167         2398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_18647,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000167 DATAKH010000000
VERSION     DATAKH010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18647"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1245
                     /locus_tag="VHN55_06850"
     CDS             <1..1245
                     /locus_tag="VHN55_06850"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX2803684.1"
                     /translation="GPIVRSELTSSCAPPPKSDQRICWIAFAMMDRPIPALEQSFLRT
                     KTNGLASFLRIAERKANSSNNTIFADGKGAIAYLHPQFIPLRDDRFDYTRPVNGSDPA
                     TDWRGDTPLDKLPNAINPPTGWVQNTNNWPWSSAGPASPDSKRFPKYMDVFGENPRGV
                     HAVSLLSGTSGWTLAKLQAAAFDSRQPGFEKLIPGLVQAWERLPASDPLKKRLAAPVA
                     ALLAWDGRWSAESIPNTLGNFWGAELWKNVTSPEWDDGLPVYERLDRVTGDQKLKDLD
                     AAVARLERDFGSWRVPWGEVNRFQRISPAIDHPFSDSAPSIPVPFSSGRWGSLASFGA
                     GAKPGTKKWYGTNGNSFVAVVEFGPRVRARAVTAGGESGHPDSPHFNDQAQRYASGAL
                     REVYFYPDQLEGHTERTYHPGR"
     gene            complement(1256..>2398)
                     /locus_tag="VHN55_06855"
     CDS             complement(1256..>2398)
                     /locus_tag="VHN55_06855"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2803685.1"
                     /translation="DADIETVPAYVYTREEGHVEEIEKEVELARRLGLPASVTRDTGL
                     PFDVKAAMRWDDQAQFHPIKFVVGLAQTITGDGSHVFENSRVTDWDPKRVVNDRGTVR
                     ARHVVMATNLPIGQVGMFYATNYPMAEPVIAAPLREALPGYYIGVEESEHSIRTHRSN
                     GRIHAVCAGSHFKPGHTDDEQEYFADLEKWLKGGFEADAVDYRWANEDYSPMDSAPFI
                     GWSSDSDDAYLVATGFAAWGFTNGMAAGMIIADLAAGKENRWIDLFDAKRVKPLASAK
                     EFVKENTHVAKELVGGYVSPKPKSVDDLAGGEAAIIKIDGDEVAAFRDENGSLHKVSA
                     VCTHMGCVVGWNPIDRTWDCPCHGSRFDLSGEVLNGPAVLPLEKKG"
BASE COUNT          412 a          787 c          768 g          431 t
ORIGIN      
        1 gggccgatcg tccgaagcga gttgacgtcg agctgcgcgc caccgcccaa gtcggatcaa
       61 cgcatttgct ggatcgcctt cgcaatgatg gaccggccga tcccggcgct cgagcagtcg
      121 ttcctgcgga cgaagacgaa cggcctcgcg tcattcctca ggatcgccga gcgcaaggcc
      181 aacagctcca acaacaccat cttcgccgac ggcaagggcg cgatcgccta tttgcacccg
      241 caattcatcc cgctccgcga cgatcggttc gactacacca ggccggtgaa cggttccgac
      301 ccggcgaccg actggcgcgg cgacacgccg ctcgacaagc tgccgaacgc gatcaacccg
      361 ccgacggggt gggtgcagaa caccaacaac tggccatggt cttccgccgg cccggcaagc
      421 ccggactcga agcgtttccc caaatatatg gacgtgttcg gggagaaccc gcgcggagtc
      481 cacgcagtct cgctgctgtc gggaacgagc ggctggacct tggcgaagct gcaggcggcg
      541 gcgttcgatt cgcggcagcc cggcttcgag aaactgattc ccgggctcgt ccaagcctgg
      601 gagcggttgc ctgccagtga tccgctcaag aagcgcctcg ccgctcccgt cgccgcgctt
      661 ctggcctggg acgggcggtg gagcgcggaa tcgatcccca acacgctcgg caatttctgg
      721 ggcgccgagc tgtggaagaa cgtgacgagt cctgaatggg acgacgggct tccggtttac
      781 gagcggctcg accgggtgac cggcgatcag aaactgaagg atctggacgc cgcggtcgcc
      841 cggctggagc gcgactttgg cagctggcgc gtgccgtggg gggaggtgaa ccggttccag
      901 cggatctcgc cggcaatcga tcatccgttc agcgattcgg cgcccagcat cccggtcccg
      961 ttcagctcgg gacggtgggg atcgctggcc tcgttcggag caggagccaa gccgggaacg
     1021 aagaaatggt acggaacgaa cggcaacagc ttcgtcgcgg tcgtcgagtt cggtccgcgt
     1081 gtccgcgccc gcgccgtgac agccggcggg gaaagcggcc atcccgattc gccgcacttc
     1141 aacgatcagg cgcagcgcta tgcgtcagga gcgcttcgcg aggtctattt ctaccccgac
     1201 cagctcgagg gccataccga gcgcacctac cacccgggga ggtaggggag gcctctcagc
     1261 ccttcttctc gagggggagc accgccggcc cgttgagcac ctcgcccgat aagtcgaacc
     1321 gcgacccgtg gcaggggcaa tcccaggtgc gatcgatcgg attccagccg acgacgcagc
     1381 ccatgtgcgt gcagaccgcc gataccttgt gaagcgaccc gttctcatct cggaacgctg
     1441 caacctcgtc gccgtcgatc ttgatgatcg cagcctctcc ccccgcgaga tcgtcaaccg
     1501 acttcggctt gggcgagacg tatccgccaa ccagctcttt ggcgacgtgg gtgttttcct
     1561 tcacgaattc ctttgcgctc gccagcggct tgacccgttt cgcatcgaac aggtcgatcc
     1621 atcgattctc cttgccggct gccaggtcgg cgatgatcat ccccgccgcc atgccgttgg
     1681 tgaagcccca ggcggcaaac ccggtggcga cgagataggc gtcgtcgctg tcggacgacc
     1741 agccgatgaa gggcgcgctg tccattggtg aatagtcttc gttggcccag cggtaatcga
     1801 ctgcgtcggc ctcgaaaccg cctttcagcc acttctcgag atcggcgaaa tattcctgct
     1861 cgtcatcggt atggcccggc ttgaaatgcg agccggcgca cactgcatgg atgcgaccgt
     1921 tcgagcggtg ggtgcggatc gaatgctccg actcttcgac cccgatataa tagccgggta
     1981 gcgcttccct taacggtgcc gcgatcaccg gctccgccat gggatagttg gtggcataga
     2041 acattccgac ctgtccgatt ggcaggttcg tcgccatgac cacgtggcgc gcccgaacgg
     2101 tgccgcggtc gtttaccacc cgtttcgggt cccagtccgt aacccggctg ttctcgaaga
     2161 cgtggctgcc gtcgccggta atggtctgcg cgaggccgac gacgaatttg atcgggtgga
     2221 attgcgcctg gtcgtcccag cgcattgccg ccttgacgtc gaacgggagg ccggtgtcgc
     2281 gagtgacgct cgcgggcagg ccgaggcggc gagcgagctc gacctccttt tcgatttcct
     2341 ccacgtgccc ctcctcgcgc gtgtagacgt aggcgggcac ggtctcgatg tcggcgtc
//
LOCUS       DATAKH010000168         2900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_5134,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000168 DATAKH010000000
VERSION     DATAKH010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5134"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..1305
                     /locus_tag="VHN55_06860"
     CDS             136..1305
                     /locus_tag="VHN55_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEX2803686.1"
                     /translation="MNELVVRIAARGDGVTASGRHVPFAVPGDAVLDDGALAFGAHHQ
                     QPPCRHFPECGGCQLQHADDAAYRGYLVSRVETALGQHGLECEIREPHLSPPRSRRRA
                     TVKAMKLGKGAVVGFNAEKSHRIVDMQECHILRPELFALVQPLRQLFAALLKPKRGAE
                     AQLTLVDGGVDVLLRNVAADGLAAIEALTELAGEHGLARLAVDSGGGPETVYEPVPAT
                     VTLSGVPVAFPPGGFLQATEDGEKALVDCVRECVGASKSIADLFAGLGTFALAARASY
                     AAEASRDSAAALQSAAPNLAVEHRDLYRRPLDARELERFETVILDPPRAGAAQQVGRI
                     AASSVARVAYVSCNAATFSRDARTLAEGGYTLDWVRPVGQFRWSTHVELAGCFSR"
     gene            complement(1302..1754)
                     /locus_tag="VHN55_06865"
     CDS             complement(1302..1754)
                     /locus_tag="VHN55_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003043707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEX2803687.1"
                     /translation="MPYSPILVPVVALVAWTLLMQVWMYATRFAAMKRAGISLKGRVG
                     TRGGALEGAIPDEANWKAHNYNHLMEQPTIFYAIALTLALMGFGDGINFWLAWGYVGL
                     RIVHSILQATVNVVTYRFLVFTLASLCLLGLTTHAALRMLHDCGILHF"
     gene            complement(1838..>2900)
                     /locus_tag="VHN55_06870"
     CDS             complement(1838..>2900)
                     /locus_tag="VHN55_06870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803688.1"
                     /translation="AKTLKRLPVDQPLRQAMSGHGYRSASAAAGPVSVTMSLRQNALG
                     EQRIDLTEMQLSEEDHVRAREMALLAVSRITPDTAVALGISQTGRTLQQQLAETSENA
                     FLVARDPMSRAGFHPRPFASIGVRHSFGPVALSVTSERGKAVTTFERAHDTPGYTINS
                     VTLDARQGAARFSLGASHLSEDETVLGSRFSPLLATGGARTTFVDAAAAVRLGRGWAL
                     HGSYRRGWTWARGSGGLVDNGHLASQAFAFDVSKQGLFAIDDTLAFRLMQPLRVTSGG
                     FRLSAPVSYDYESRTALYGDRLLSLAPGGRELDFEFAYGLGLFGGRFDFNGFVRTEPG
                     NVRSAKRDVGAAIRFTLSE"
BASE COUNT          469 a          967 c          958 g          506 t
ORIGIN      
        1 ggtcgccagg cgtatgcccg ccttcgacgc tgcatgcgca gcggtgtggc ttcacgggcg
       61 agccgccgag attgcaggcc cgcacatgat cgccgacgat cttgccgccg caattcccgc
      121 cgctctcgac cttctgtgaa cgaactggtc gtccggattg ccgcgcgcgg agacggagtc
      181 accgccagcg gccggcacgt gccgttcgcc gtgcccggcg atgccgttct cgacgatgga
      241 gcgctcgctt tcggtgccca tcaccagcag ccgccgtgcc ggcacttccc cgagtgcggt
      301 gggtgccagc tccagcacgc cgatgatgcc gcctaccgag gatacctcgt gtcgagggtg
      361 gagacggcgc tcgggcagca tgggctcgag tgcgaaattc gcgaacccca cctgtcgcct
      421 ccacgttcca ggcgccgggc gacggtgaag gcaatgaagt tggggaaggg tgcggtggtc
      481 ggcttcaacg ccgaaaaatc gcaccggatc gtcgacatgc aggagtgcca tatccttcgg
      541 ccggagcttt tcgcgctggt gcagccgctt cgccagctgt tcgccgcctt gctcaagccg
      601 aagcggggcg cggaggcgca actgacgctg gttgacgggg gcgtggatgt gcttctgcgg
      661 aatgtcgctg ccgatggcct ggccgctatc gaggcgctga cggagcttgc tggcgagcat
      721 gggctggcgc ggctcgccgt cgacagcggc ggcgggcccg agacggtgta tgagcctgtg
      781 ccggcaaccg tgaccctctc gggagtcccg gtcgctttcc cgcccggcgg attcctccag
      841 gcgactgaag atggcgaaaa agcgctggtg gactgcgtcc gcgaatgcgt cggcgcttcg
      901 aaatcgatcg ccgacctgtt cgctggcctt ggcaccttcg cccttgctgc gcgcgcatcc
      961 tacgcagccg aggcatcgcg cgattccgcc gctgcgctgc aatcggccgc acccaatctg
     1021 gccgtcgagc accgcgacct ctaccgccgt ccgctggatg cacgagagct cgaacggttc
     1081 gagaccgtga tcctcgaccc gccgcgagcc ggcgccgccc agcaggttgg acggatcgcg
     1141 gcgtcatcgg tggcccgcgt ggcctacgtc agctgcaatg ccgctacgtt ctcgcgcgat
     1201 gcaaggacac tcgccgaggg cggctacacg ctcgactggg tgaggcccgt cggccagttt
     1261 cgctggtcga cccacgtcga actcgccggc tgcttctcgc gctagaagtg caggatcccg
     1321 caatcgtgga gcattcgcag cgccgcatgg gtcgtcagcc cgagcaggca cagcgacgcg
     1381 agcgtgaaaa ccaggaagcg ataggtgacc acgttcaccg tcgcctgaag gatgctgtgg
     1441 acgatccgta ggccgacata gccccaggcc agccagaaat tgatgccgtc gccgaaaccc
     1501 atcaacgcga gcgtcagcgc gattgcgtag aagatcgtcg gctgctccat caaatgattg
     1561 taattgtggg ctttccagtt ggcttcgtcg ggaatggcgc cttccagcgc accgccgcgc
     1621 gtgcccaccc ggcccttgag gctgattccg gcgcgcttca tcgcggcaaa tcgtgtcgcg
     1681 tacatccaga cctgcatcag cagcgtccag gcgaccagcg ccaccaccgg cacgagaatc
     1741 ggactgtacg gcatgaatga cctcccccct gctcgagcgg ggagggtgct tcacttcgcg
     1801 gccgttggca attaggcgcc ttggctccgc tgcgccgcta ctcgctcagc gtgaagcgga
     1861 tcgccgcgcc gacgtcccgc tttgcggaac gcacgttgcc gggctcggtc cgaacgaacc
     1921 cattgaagtc gaagcgtccg ccgaacagtc ccaggccata agcgaattcg aagtcgagct
     1981 cgcgtccgcc cggggcgagg cttagcagtc gatcgccata gagcgcggtt cgtgactcgt
     2041 aatcgtagct cactggcgcc gagagcctga agccgccgct ggtaaccctc agcggctgca
     2101 tcagtcgaaa cgccaatgtg tcgtcgatgg cgaacagccc ctgcttcgac acgtcgaaag
     2161 caaacgcttg gctggcgagg tggccgttgt cgaccagtcc gccgcttccg cgcgcccacg
     2221 tccagccgcg gcgataggag ccgtggagcg cccagccgcg gcccagccgg acggccgctg
     2281 cggcgtcaac gaacgtcgtt cgcgctccgc ccgtggcgag cagcggtgaa aagcggctgc
     2341 ccagcactgt ttcgtcttcg ctcagatgcg aagcgccgag gctgaatcgg gcagcgccct
     2401 gccttgcgtc cagcgttaca gaattgatcg tgtagccagg cgtgtcgtgc gctcgctcga
     2461 aggtcgtgac ggccttgccg cgctcgcttg tgacgctcag tgccactgga ccgaaactgt
     2521 gccgaacgcc gatgcttgcg aagggtctgg gatggaagcc ggcgcggctc atcgggtcgc
     2581 gcgccaccag gaaggcgttt tccgaggtct cggcgagctg ctgctgcaag gtgcggccgg
     2641 tctgcgaaat gccgagcgcg acggccgtgt cgggcgtgat cctgcttacc gcgagaagcg
     2701 ccatttccct ggccctgacg tgatcttcct cgcttagctg catctcggtc aggtcgatcc
     2761 gctgctcgcc caatgcattc tggcgcagcg acatcgtgac cgaaacgggc ccagcggcgg
     2821 cactggccga tctgtatcca tggccgctca ttgcctggcg caagggctgg tcgaccggca
     2881 ggcgcttcaa ggtctttgcg
//
LOCUS       DATAKH010000169        32373 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_28469,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000169 DATAKH010000000
VERSION     DATAKH010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 32373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32373
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28469"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1326)
                     /locus_tag="VHN55_06875"
     CDS             complement(37..1326)
                     /locus_tag="VHN55_06875"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX2803689.1"
                     /translation="MIGRLGAIGVFFFLRIGCALILLKVAASRLSVAGFADFTQYLAF
                     ASLVTLLAVGGTQNGLIRQVAAARSPGELEETVAAAAAIWLAASGVLLAVSFLFAPVI
                     GTILVGHGSVGATVVALTAIAIFAGPGQIRCSMLTGQGRMISSLAIQSAGLLAGAAGA
                     AWFAFRGNPAAAGLAFACGTLVPSLPALAVLARRHAWPAAASLLAHAKQLLRYSLAFA
                     TVAAAIPLTLFALRWQYRGAFGDEALGHWLSANRISDLSTQLIGLFMLQIFVPQIARM
                     PDELARRRFTLICGAGGMAVMALPLIAFSIASEPLVRLFLSPSFLPAIPAIQTYMAGD
                     MLRVWTSIAIYTAFAAGRAGRYAGLELAVIGSIGAITMLLIGQGYSSAPQWAYFLVHA
                     VFSAGFLAFLFLSWRAPAASRIAETASLTSKISARQL"
     gene            complement(1323..2672)
                     /locus_tag="VHN55_06880"
     CDS             complement(1323..2672)
                     /locus_tag="VHN55_06880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803690.1"
                     /translation="MASKSGITRAPLFAVLGYVVLTFVLFLAWPIDWPIYGAWDWTNL
                     VLYVLMCLFVLYVGAMTGSAGSTQLAAPLPGIKLLLAAGAAASAALLIPSCLAYTGRG
                     PWELMDALQNQGEAYRRLQIQLYFGEGQRAFMVAMRFLAGPLMYAVLPLGVIHWRRIG
                     WLGRAAVGVAVACSIVFSIMRGTDKEIADLFVIGVAALLVSMGRAMTLSRSRSQLARR
                     YWLPAILGVAFLFAAQGLFTERKDERLGGIENKALVCANNSRICADIDHPVIAWLPLR
                     ERFGLSVFILSTSSGYFGLHLALEKPFESSLGVGHSPAALSVYEAATGDEKPHRRTYT
                     YRNGFDQWPEESYWSTLITWIANDIGFAGAVAVLGLLGFAWGLWWREAAAGMSDPAAV
                     LFVQATTMVFYLPANNQVFAAYEGYSIFFAWLAIWWWHRSTRRVFAALPIAAPEPAR"
     gene            complement(2722..3936)
                     /locus_tag="VHN55_06885"
     CDS             complement(2722..3936)
                     /locus_tag="VHN55_06885"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2803691.1"
                     /translation="MRILYLTQWFEPEPNIIKGLAFVTELQAAGHEVTVVTGLPNYPT
                     GRIYPGYRLRLIQHEEIDGVRIVRLPLYPSHDSSAVRRSLTFLSFFLSALAYCLFRAG
                     RYDLAYVYHPPITVGLAAALAGCVRKLPFVLDVQDLWPDTVATTGLRGAGMLAGPLGF
                     ACWFVYRRSELIIAQSSGMCRALVERGVPERKISTIYNWAVQEDTRSSLRDANEEGGR
                     FAIVYAGNFGRAQGLATVVAAAELLSRRRQDIDIRLIGDGVEAEALRKKVRGITGISI
                     EPRISPAELDDVVAGSDALLLHLRDEPLFRITVPSKTQAYLSYGRPIVAAVGGEAADL
                     LGRSCAAIVVAPDDPVALSEAIAEMADLSLERRESMGAAGRRFYLDNLSFASGMSSTL
                     ATVDAAMSRAVG"
     gene            4043..5170
                     /locus_tag="VHN55_06890"
     CDS             4043..5170
                     /locus_tag="VHN55_06890"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX2803692.1"
                     /translation="MLATNQPVPFFDWGSLYAEKSDRYARIMHETAAAGGFILHDAVA
                     QFERELAAYIGVRHAIALSDCSNAMLLGLRASRLQPGDEVILPGHAFIAAAQAIHHAG
                     GRAVPVDMCPDGRHVDPAAVRAAITPRTKGLMMVYVSGTVCDMDAIRAIADEHGLPIF
                     EDAAQALGARFGGTMAGLFGQWAAFSFYPSKTLGCFGDAGALVTDDDEIAARVRASRN
                     HGAGPDKAISEDCDIWGTNSRMDNLHAAILVEKLGWYDEAIARRREIALQYHDSLSDL
                     SGLQLPPRPGEDPRRFDIFQNFDICCERRDELKEHLATHGIGTIVHWGGIGLHRFRNL
                     GLGGSLPNTDRFLDRALLLPMNHVLRDDQVLRTITAVRSFF"
     gene            5170..6003
                     /locus_tag="VHN55_06895"
     CDS             5170..6003
                     /locus_tag="VHN55_06895"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX2803693.1"
                     /translation="MATALLQQDDSLALALRLRRHVVRMCKLGGSSHVGSCLSIADIV
                     AVLYGEVLRLDPLRPDWTARDRFILSKGHAGACIYAALAERGFFPVSELADHYRNGSK
                     FSGHVSSKGVAGVEFSTGSLGHGLGVGAGMALQLRRLGGGQRTFVLMSDGECDEGSVW
                     EAALFAAHRRLGRLCAIIDFNKLQSLAPVADTLALEPLGAKWRAFGWRVVRIDGHDHA
                     ALRSALATPSAADDRPLCVIADTVKGKGVSFMENQVLWHYRVPAGEEFAAAMRELGAD
                     A"
     gene            5996..6913
                     /locus_tag="VHN55_06900"
     CDS             5996..6913
                     /locus_tag="VHN55_06900"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2803694.1"
                     /translation="MRDAFVEALTELTAEDPSVVLVTGDLGFGVLTDYAARFPDNFVN
                     AGVAEQNMTALACGMALEGARAYTYSIANFPTLRCLEQLRNDVCYHGATVTVVAVGGG
                     FSYGQLGMSHFATEDLAIMRAIPGMTVVAPSDPWMAYELARQLYRTGGPAYVRLDKGK
                     AGLPAGPVELGKVRTVREGEDGVIFATGGILAEALAAADLLADQGISVAVVDVHTLKP
                     FDESGVRRAAKGRPIVVTLEEHNIAGGLGSAVAEALLEGGAAPRKFRRIGLADCFPEV
                     VGDQDYLRKAHQLDRNAVVAAFREEFAFQ"
     gene            6910..7626
                     /locus_tag="VHN55_06905"
     CDS             6910..7626
                     /locus_tag="VHN55_06905"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEX2803695.1"
                     /translation="MRKRLFDIGFSLVALLFLWPLLAIAAFAIWCQDGRSPFYVSPRV
                     GRGNRDFPMIKLRTMVAGADRLGGVSTAKSDTRVTPLGRFFRRWKVDELPQFINVLAG
                     HMSVVGPRPNVRVGGVDRYTSEELALLDVRPGLTDLASIVFADEAEILEGSSDVEATY
                     NLLIRPWKCRLGLLYIGRGTLAADLVLTALTMVAIVARPLALSLLDGLLVRWGADTST
                     RELCLRQEPLGAFVIEGEPS"
     gene            7623..8162
                     /locus_tag="VHN55_06910"
     CDS             7623..8162
                     /locus_tag="VHN55_06910"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2803696.1"
                     /translation="MSVCFLLRDGAEPPREDVGLPAGMTLQLWRPSDEAALPLSPFDP
                     LRVAVWLQDRCGLFADRRYTELSIWRGGKRIHRLIVTPRWHRFPFMEPGDLQLGGLWT
                     DPSWRRRGLARWTMNRAHRLFGAPGQRFWYVTDSSNAASTALAEAAGYQIVGEGRRTR
                     PAGLALLGRFRLDRPCVDS"
     gene            complement(8170..9297)
                     /locus_tag="VHN55_06915"
     CDS             complement(8170..9297)
                     /locus_tag="VHN55_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803697.1"
                     /translation="MPRAVARSAIAAAALLCAAYVAGARAPGGARSALDSARDLLAQG
                     ADPADPAVQALVGKALRRDVTIPAGIEMLALARESRGDPPAAARLYRLSDRISRRSLP
                     TRLWLAQEAVERGDVAATLAHMDIALRTSSAAPTLVFPALARGLEDAALVEPIAALVD
                     RPSDWREAFLIYLAERAEPESAAALFLAVRDRRLILKNELDRTVIARLVDDGQFSLAG
                     RTDRAFASNANEAPLVADGQFDNPAARYPFGWGITDTREIGASRDVEDGRSVLAYHAN
                     SAEGGQVAAQLLMLQQGRYVLETGASPAQRSDAPPLWVLSCAGQERVIATIALVPDSN
                     GRSASRFAVPAGCPAQWLSLAVRPALAPQSGRVDHVRIARQ"
     gene            complement(9302..11515)
                     /locus_tag="VHN55_06920"
     CDS             complement(9302..11515)
                     /locus_tag="VHN55_06920"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HEX2803698.1"
                     /translation="MDAISPEALPWLTGQVPIVAGPGATGGPAREPQLKRLLGFLTRW
                     RWIIASALLAGLVLGLAATVLMTRQYASTVRLEISRDTARVTKIEGVERETSIGDQEF
                     YQTQYGRLQGTGLAERVAEDLHVADDPAFFAQFGREAEFEKAGQLVGAQDRRAKRREI
                     AGAILLDHLTVAPLRGSSLVDVTATTPDPDLSQRIAASWADNFIKLSMERRFEASSYA
                     RDFLEKRIEALRGTLEASERAAVEYASRQGIINLPQAAGEDEQSGSVARSPLTDKLQA
                     LNQALSVATADRIAAQSQLSGLQRADASTEAFNNPAINELRRQRSEVSAEYAKTASQF
                     GSAYPKVKALAGQLDEIDSSIAREIARTRALLVQNYRSAASREGSLASQVAGLKGQVN
                     DVRRRSIQYNMYLRDADTNRQLYDSLLQRYKEIGVAGNVQDNNIAIINRPKLPDRPVS
                     PRLLVNLLVAMFAGGLAGIGIAVALSQIDETIGDPENVRAKLGLPLIGVLPLVKNSTP
                     IEELDNPRSPLVEGYVAVQANLKLATAQGMPRSIAFTSTRAQEGKSTSAIALARLLAR
                     GNKRVVVIDADMRSPSLHHMFGLANEAGLSNLLAGDPDGANLRHETSWDGLSIITAGP
                     HPPSTADLLMGDGLHHLVDGLLEDFDHVVIDSPPVLGLADASLVASAVEAVVFVVESG
                     VTRAGVAKTAVERLREARANLIGAIVTKLDVTRRGFSYDYGYGYGYGEGGAAKAA"
     gene            complement(11515..12246)
                     /locus_tag="VHN55_06925"
     CDS             complement(11515..12246)
                     /locus_tag="VHN55_06925"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX2803699.1"
                     /translation="MTLARLSVALASTCLLLSACSNGPRLGESDSPMVVTKLTELPPP
                     SGFNSATGAFDYRIAALDKVSLIVADTPELTGVFRTDSAGRIVLPYVGEVTAAGLTPA
                     QLSVQIQDRLRSGKFINDPQVAVNVDEADSLSYTIDGQVNAPGDYTAAPDLTLMRAVA
                     RAKGLNEYARLNDVVIFRTVDGRSLAALYDLDAIRHGLYADPHVYPNDVVVVGDSVAR
                     RKLQQFVQSLPLLTTPIVLALQRLP"
     gene            complement(12243..13640)
                     /locus_tag="VHN55_06930"
     CDS             complement(12243..13640)
                     /locus_tag="VHN55_06930"
                     /inference="COORDINATES: protein motif:HMM:NF019268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX2803700.1"
                     /translation="MIAKKTRAAFLLGCSAAIAATASSPAAAQEIERAEPADEAQQDS
                     TAPDTDSQTEPADETMAASDDGGGTDILSRNTVRVLFDARLVAANGERSWTDRGLGKT
                     RFDGTSDGDYELYAVPVEAAIIWTPRLTRSLSANVSAGWQRDQDNEFDVMEAFVNFLP
                     PQTGPIGVHLRAGLMWPEISLEHSTGGAWSVVDTITPSAINSWVGEEVKVLGLEGTVR
                     TDLGQHTFALTGGVFGFNDTSGTLLSFRGWALHDEKATAFGYFELPPFNEFISHLQED
                     RTRSLLEIDDRPGFYGRLDWRPPAPFGAALFYYDNRGDPEAFTPAGQWGWRTRFWNLG
                     VNADIGSNTRLLAQGMTGSTIMGFPQNDRRWVHTKFRSAFVLVSHRLDDKWNVAGRIE
                     AFRTREIGSQMSPMESERGWSWTAAVKYLVNDHVTVKAEALNVRSRRGVRATHLGIDP
                     FQAQTVFQIALGVAL"
     gene            complement(13637..14689)
                     /locus_tag="VHN55_06935"
     CDS             complement(13637..14689)
                     /locus_tag="VHN55_06935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803701.1"
                     /translation="MLVRARNADVACDGDRICAPEGRFDIVLDCRDSDVRPGLINSHE
                     HLHRNHYGRLGKPPYRNATHWARDIQVRHRRRIERGRALPRRDAYLAGAWKNLFAGVT
                     SAVHHDRWDDELDRDFPLRVIRVANDDSVSFTPALGANRRNGSAYALHVAEGTDDEAA
                     GEVEIIDRAGLLNRYLLAVHAVGPGAEGAERLRASGAAIIWCPTSNHFLFGRTAPETL
                     FGAATDVLLGSDSLVTGAGNLLDEIRFARTVGRLDDERLEGAVGEVAARRLRVANPKL
                     EPGAPADFILLAAPLLEATAGHVRLVVVDGVPRVAASEAARQLQSVGVAGRRMTVGGV
                     TRWTNAEPTSRNRGSR"
     gene            complement(14700..15392)
                     /locus_tag="VHN55_06940"
     CDS             complement(14700..15392)
                     /locus_tag="VHN55_06940"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2803702.1"
                     /translation="MLETAQLPVLDPAEAYSLWAPTYDRETAVSLLDNSLVSELTPPL
                     PGRRLLDVGCGTARRLIVAGAASATGVEPCREMIAAGAVNAAGRAGVRILEGHAGNLP
                     VGDGSFDVIWCRLVLGHIAGLAAPYSEMARALAVGGTLVVSDFHPDAEARGHRRTFRS
                     ASGVHEITNYAHSIADHAAVAGRCGLAFVDQSEGRVGPPVRHLYAERGRLADYEHDMG
                     IPLVFALRFERR"
     gene            15560..15817
                     /locus_tag="VHN55_06945"
     CDS             15560..15817
                     /locus_tag="VHN55_06945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803703.1"
                     /translation="MNLLKVVATAAVASLLATPGYAEPANPAGKLTLASKAQPAGAPA
                     NARSTVKSPKSSTLPLIAIGTALVVGAALLLGNNDSKPASN"
     gene            15910..17229
                     /locus_tag="VHN55_06950"
     CDS             15910..17229
                     /locus_tag="VHN55_06950"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX2803704.1"
                     /translation="MAGLLVLAVTLAGGASRAGEPAQLAARFAAIVAIAATLWPLDFA
                     MLRRHRPLALFALACVALPMAHLIPLPPALWATLPGHAAYAQIAGATATEGWRPLSLT
                     PDLTANALQALLVPAAALLAALHLAAADRKTLAILFIAAAVASAMLGLAQLGVGGNQL
                     RLFEQSSEDAPVGLFANRNHQAAFLACALPLCAAVLPRTGDPRSWAVMAAIFVPAALM
                     VSAVTLLTGSRMGALSLAFAVLGTGWILNARGLLRRPASRSVLAAWWACGLAIALIAG
                     AVLLESGILDRFGGEDIAADIRGAALPSLVATAAAFFPTGAGFGAFDSVYRQFEPDAL
                     LSTIYLNQAHNEPLQLLIEGGIPALLLLLLFILWWARTSVAIVRGEGEASRRSLPRAA
                     LVVTAVLMASSLVDYPLRTPLLAALFAFCCAEMALAAARDRRLGESG"
     gene            17226..17954
                     /locus_tag="VHN55_06955"
     CDS             17226..17954
                     /locus_tag="VHN55_06955"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2803705.1"
                     /translation="MSRSTLGSKGGSAWRWRLSPGGLLRELLARRGTIEAPLYGESAS
                     DLALIRETRCRVPLLLSDIAALHVLLCARAAARLGGSMAEAGVLMGGSARLICEVKGT
                     ADLHLFDTFDGPLEEEPGGMSRQAAELRGHFGDISGQLAVVRDLLQPYPGVCIHSGIF
                     PATASGLKDQRYSFVHLDMDLASSTRAALDYFHPRLMPGGILVGDDYNDPGVAGVFRA
                     FFASRKDSLIELPWGQVIVARTEG"
     gene            complement(17951..18298)
                     /locus_tag="VHN55_06960"
     CDS             complement(17951..18298)
                     /locus_tag="VHN55_06960"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX2803706.1"
                     /translation="MAQNWIAFSSRAAAGAAALFLVYGADALAAGKGTTYTVTMSQMR
                     YGPLPSNLKVGDTIVWVNKDTVPHTVTAKDRKFDVRIASGKRASQTLTTAGNFPFYCV
                     YHPAMRGTLKVGS"
     gene            complement(18403..19212)
                     /locus_tag="VHN55_06965"
     CDS             complement(18403..19212)
                     /locus_tag="VHN55_06965"
                     /inference="COORDINATES: protein motif:HMM:TIGR02001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TorF family putative porin"
                     /protein_id="HEX2803707.1"
                     /translation="MVKSRLASRLSASRRAAVEPAPRGLPRALERRALNLQIWSLPIA
                     ALALCTGNPAAAQVSGAIAVESDFRLRGLSMSAGRPVASLRLGLDDESGVYASGSATA
                     VLTRGEDPRFLAYQVGGGIAKRVGHFWTVDFGIAHNEIRAAYDGGYPYTYTELYAGAT
                     RAPFSAYVFVSPNYFRSDFWTVYGQLEASVSPAENWHLTAHVGSLNYVDTPPQYTVRR
                     KSLYDWRLGVTREIGNLEIHAALTGGGPGRQYYYGASHSKTAIVAGASLSF"
     gene            complement(19157..20350)
                     /locus_tag="VHN55_06970"
     CDS             complement(19157..20350)
                     /locus_tag="VHN55_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEX2803708.1"
                     /translation="MMLALLLAALAGIAAPASAAESVQADGEDRQILVMLTMAAPHHR
                     PNSGYGGNYGDISSRAARKRLAQNIANRYGIQLREGWPMPVLGVDCYVMAVPAGKSID
                     KVIEAVSKERGVAWSQRMYSYAIGAAAGGGGGDPLYLIQPTAAEWKLSELHRSATGRG
                     VKIAIVDSQVDVKHPDLAGQFIADRNFLETPAARPERHGTHVAGIIGAKAGNGIGIAG
                     VAPGARLMALRACEEIRSGRASGQTLCKSLPLAKALQFAIDRDADVINLSLSGPRDLL
                     LNKLLDVALSRNVTVVTAFDRSLPGGGFPASMEGVIPVADESLQRMPDGVYGAPGRDL
                     PTTQPGGGWSLVNGTSYAVAQVSGLAALAGEKGKGRFGARLVRASDGKVQACLTIIGK
                     SPRCR"
     gene            complement(20377..21015)
                     /locus_tag="VHN55_06975"
     CDS             complement(20377..21015)
                     /locus_tag="VHN55_06975"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX2803709.1"
                     /translation="MADIFPLRASEHDKVQQLLPWFVNGTLSNSEAGRVKAHLADCAE
                     CREALEFDRKLARDVATLPLNVDDSWRAMEQRLADRRSDNVVRGRFGFLSQSVPMRWA
                     ATASLAAAVAATVVVTSLQPDAVPDQTYRALGSAASSAGGQVVVLFKPDTTEQQMRVI
                     LAAQGARLVDGPTAAGAYVLRIDNGSPEPAIRALRESSQVVLAEPVANDTQP"
     gene            complement(21030..21629)
                     /locus_tag="VHN55_06980"
     CDS             complement(21030..21629)
                     /locus_tag="VHN55_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010187486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX2803710.1"
                     /translation="MNEKQVRKVERARSSRGSNGEELLLLEKIRSGDDDAFETLYRAY
                     HPRLTNFLIKMVRRPQLVEEVLNDTMMVVWQRPDSFHGGSKLSTWIFAIAYRKALKGL
                     KRCDDPLEDLDAPNRPSEDDSPEDSSENVRRRDLIAEAMKELSPAHRAVVDLTYYHEL
                     DYNEIASILDCPVGTVKTRMFHARRQLRRIVDGGLEDWV"
     gene            complement(21719..22183)
                     /gene="paaD"
                     /locus_tag="VHN55_06985"
     CDS             complement(21719..22183)
                     /gene="paaD"
                     /locus_tag="VHN55_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaD"
                     /protein_id="HEX2803711.1"
                     /translation="METAVAELSEDAILAVLDMVPDPEIPALSITDLGIVRAVTVDPP
                     RVLITPTYSGCPATIAIEQSIRAALDSAGFRQVFVERVLFPPWTTDWITRRGHERLRA
                     YGIAPPSPSETADCPRCGSSETEEVSRFGSTPCKAQWRCKSCQEPFDRFQCH"
     gene            complement(22194..23396)
                     /gene="pcaF"
                     /locus_tag="VHN55_06990"
     CDS             complement(22194..23396)
                     /gene="pcaF"
                     /locus_tag="VHN55_06990"
                     /EC_number="2.3.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HEX2803712.1"
                     /translation="MTDAFICDYVRTPIGRYGGALAHVRGDDLAAIPIKALIDRNPNV
                     NWSELDDVILGCANQAGEDNRNLARMAALLSGLPDSSGGVTLNRLCGSGLDAVAMAAR
                     AIRGGESDLIIAGGSESMSRAPFVMAKAEAPFSRNAEIYDTTIGWRFVNPKMKEAYGD
                     DTMPSTAENVAEEFQISRDDQDAFALRSQQRTASAQANGRLAAEIVPVEIPQRKGDPL
                     VVDSDEHPRSTSLEALAKLRPIVRPGGSVTAGNASGVNDGAAAIIVASEECAKRNGLT
                     PKARILGAAVAGVPPRIMGIGPAPASEKLMKRLGLKIGDFDVIELNEAFAAQGLAVLR
                     QLGLPDDSEKVNPNGGAIALGHPLGMSGARLALTATEQLQRTGGKLALATMCIGVGQG
                     IALALERV"
     gene            complement(23393..24487)
                     /gene="hppD"
                     /locus_tag="VHN55_06995"
     CDS             complement(23393..24487)
                     /gene="hppD"
                     /locus_tag="VHN55_06995"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010403065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HEX2803713.1"
                     /translation="MTMATAVEEKSVLGLENPMGTDGFEFVEYTAPDPQLLRDLFTKM
                     GFPAVARHKRKDVTLHKQQDIHFIINSEPGSYAEDYARAHGPSACAMAFRVKDAKAAY
                     DRAVKLGGTPAKTDVGKGELDIPAIEGIGGSLLFFVDRYGEKGTIYDVDFDFFDDWRQ
                     IEADHASHLTYIDHLTHNVQRGRMAVWADFYERLFNFREIRYFDIEGKQTGLFSKAMT
                     SPCGKIRIPLNESQDDKSQIEEFLREYKGEGIQHIALGSDDIYKAVDIIRARGIPFQD
                     TPDTYYEMLPERIQGHDESIPELEKRRILMDGAPTEGQGLLLQIFTQNVIGPIFFEII
                     QRKGNEGFGEGNFKALFESIELDQMRRGVL"
     gene            complement(24535..27048)
                     /locus_tag="VHN55_07000"
     CDS             complement(24535..27048)
                     /locus_tag="VHN55_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX2803714.1"
                     /translation="MRREDSPVRAILGPTNTGKTYLAIERMCGHSSGVIGFPLRLLAR
                     EVYDRVVRIKGESRVALLTGEERIVPPDARYFLCTAESMPVPGGDGHDASDFQRDFAF
                     AAIDEAQIGIDPERGHVFTDRMLRVRGREETLILGSETLKPMIRELLPETEIVTRPRF
                     STLRFAGSTKLSRLPPRSAVVAFSAEQVYALAEALRRFRGGAAVVMGALSPATRNAQV
                     AMFQRGEGEYLVATDAIGMGLNMDVTHVAFAGLEKFDGRRDRRLTIAEMAQIAGRAGR
                     HQKDGTFGTLGLGDHSAEFSEQEVDSIEEHRFRPLDFLYWRNPDLDFTDVRSLIASLE
                     TPSQDPILRAAPESIDLAVLRHIAEDPAIAVRRGGAARRLWAACGLPDFRKVGPMHHA
                     RMVRRVFSYIGDGGHIPHEWFAAEVARLDNMNGDIEALADRLAGIRSWAYIAHRADWL
                     KDPSKWAERTREVESRLSDALHERLTQRFVDRRTSVLVRDIGARGSDALPVTVAADGE
                     VSVGPEPIGHLSGFDFRVDPSAKFADKRLLLAAAERRLGEELERRASSLADAPDSEFT
                     LEIEPNGAIGVGWHGSILARLAPGRSLLEPALRTARSLDRLSTTSRATLRARLERWVD
                     SQVDDTVRPLRKLAEVATDPATSPGVRALGAMLVDSGGSVPRRAMVSAIGTLDQKDRQ
                     LLYSLKVRLGPLDVFVPALLKPAAQLWRAALLAVRSGEPMPDLPAAGAATLAADSDPR
                     GAALAYRRIGREWIRIDLADRLASHAHKVRSAGGDNPVDIELATSVGLDEQAVARLMD
                     DIGFAKAGDAWRWRGRRGARRDRQQGGSHAFAELAKLKR"
     gene            27138..28268
                     /locus_tag="VHN55_07005"
     CDS             27138..28268
                     /locus_tag="VHN55_07005"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2803715.1"
                     /translation="MFEGSPGTEASARVALARARADYAPIPDSPEPFSLIVDLASEPI
                     GARWARGAATLALLCAAALAMTPDLGLFSPAQAHPVAPVQQFRLNPMLGSGVEDAVSD
                     EPVFPADLEAASKPRIVSDGSQIRVQGAVTDGLYWSLREAGVEPRIAAAYLQALATRI
                     DVGSDVAPFDRFDLVVSRREGRPLLYAALHRVDGPDVELMKWRSGGKVNWFDTDASAA
                     ERSAALMTPVAGRITSGFGLRHHPILRYSRMHAGIDFGASWGSPIVAAADGQVAAAGW
                     SGGYGRQVRIAHTDGIVTTYSHMSGIAASPGEMVRQGQVIGYVGSTGLSTGPHLHFEV
                     RLNGRAVDPMQVQLQRRQQISGPERKAFNARLRELMAIGGKV"
     gene            28371..28865
                     /locus_tag="VHN55_07010"
     CDS             28371..28865
                     /locus_tag="VHN55_07010"
                     /inference="COORDINATES: protein motif:HMM:NF027567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX2803716.1"
                     /translation="MATDREIENKFWDELDGSPFIMLGIEGERDGATQPMTANFEDVD
                     RQSGRLWFFTANDHDLTRALGQSAGAIAAYASKGHDLFASLRGTVAIDNDRATIDRLW
                     NPVVAQWYASKDDPKLAVLRFDIRDAKIWLSDVEGFLRPALNKLLGREEEAGIDKKVA
                     EIEL"
     gene            28948..29514
                     /locus_tag="VHN55_07015"
     CDS             28948..29514
                     /locus_tag="VHN55_07015"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX2803717.1"
                     /translation="MEQITSVIAPVATTVAALVVASNLGARITGFGFAIFTVGSVAWA
                     ILGLTTDQPSLLWQNVVLTGLNIFGIWRWLGWQARIAEGGMSAAEDSREEPGESLFPV
                     SLLMNGDVVSADGSEIGHAVDAMAGCTSGRIAYLVVAEGGVAGVGQTLRRLPWDQSAV
                     HEDKVNVSIDRSQFCGLDALELDHWPAR"
     gene            complement(29525..31207)
                     /locus_tag="VHN55_07020"
     CDS             complement(29525..31207)
                     /locus_tag="VHN55_07020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006834605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
                     /protein_id="HEX2803718.1"
                     /translation="MDEQPNLHQLIDEISSFDEEAAPKPRAAAATELPAVGQVVEIAG
                     SGSRIRMKGETLAQLQRHADPSVAMSGQVGSQVKMIVGDAWLIANVRTMTAEDSGEIA
                     AHVDFLGEGSREASGKMSHFRRGVTRYPIPGCAVMPVTTDDLRAVFAADDSPHIEIGT
                     VYPTDDIRGALYVDPMLSKHFAVLGSTGTGKSTSVSLILHRISELSPEGHIVMIDPHG
                     EYSAAFKGCGELFNVDNLQLPYWLMNFEEHCEVLLTTHGADRQRDADILAKCLLAART
                     KGKDMSQYGKVTVDSPIPYLLTDLGVILTNEMGKLERAGDTLPYQRLKQKLDELKADP
                     RYTFMFSGMLVSDSMPAFISRLFRLPANGRPISIVDVSGVPSDITSVVVSVLARMVFD
                     YAIWSRTEAQRPILLVCEEAHRYVPKDEMSGAQAVRKILERIAKEGRKYGVSLGLITQ
                     RPSDLAEGVLSQCGTIISMRLNNDRDQACVRAAMPEGARGFLDAIPALRNRECIVCGE
                     GVSIPIRVRFDDLEPEKRPASSDPSFAALWRETGGEEGIIQRTIKRWRGHGR"
     gene            complement(31279..32043)
                     /locus_tag="VHN55_07025"
     CDS             complement(31279..32043)
                     /locus_tag="VHN55_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02186 family protein"
                     /protein_id="HEX2803719.1"
                     /translation="MKRRLATALAAASLALVGASKPTLVPDVSARNIEIRYTFAGAQL
                     LLFGAIMYPSGRIPADPPDVVVVVKGPAEPIIVREKQRIAGIWMNAGSNRFRSAPSFY
                     AVASSRPIPTLVDQRTAAIYELGVRNLQLSPGSSAAPEKAKRFESGLLDLRLREGLYT
                     EHPNGVEITGGVLYRATIAIPSQVPVGTYTAETFLVDDGRVLAAASRDIEIGKSGFER
                     FVALAARRHSVLYGLFAVLLSLALGWSAAAMFRRRI"
     gene            complement(32040..>32373)
                     /locus_tag="VHN55_07030"
     CDS             complement(32040..>32373)
                     /locus_tag="VHN55_07030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008828324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2803720.1"
                     /translation="GGGFILVPAMIYLLGMPARVVVGTSLAMMLAVSGATTFIHSVTT
                     HSVDIVLAALLLIGSVFGAQYGAVLATRMKPDLLRLALAVLILLVALRMALGLAWRPD
                     EIYSIAYL"
BASE COUNT         5505 a        10485 c        10684 g         5699 t
ORIGIN      
        1 agacgatcgc ttccggaaag gcctcgcgga gcggattcac aattgccttg ccgaaatttt
       61 cgacgtcagg ctggccgttt cggcgatcct cgaggcggcc ggagcgcgcc aggacaggaa
      121 caggaaagcg aggaagccgg cgctgaacac tgcatggacc aggaaatagg cccattgcgg
      181 agcgctcgaa tagccctggc cgatcaacag catcgtgatc gcgccgatcg aaccgatgac
      241 cgccagttcc agccccgcat aacgtcctgc gcggccggcg gcgaaagcgg tgtagatggc
      301 gatcgacgtc cacacgcgca gcatgtcgcc cgccatatag gtctggatcg ccgggatcgc
      361 cggaaggaac gacggcgaca ggaatagccg cacaagcggt tcggaagcga tactgaaggc
      421 gatcagcgga agcgccatga ccgccattcc gccggcgccg cagatgagcg tgaatcggcg
      481 ccgcgccagt tcgtcgggca ttcgtgcgat ttgcggcacg aaaatctgca gcatgaacaa
      541 cccgatcaat tgggtcgaaa ggtcggagat gcggttggcc gacagccagt gcccgagcgc
      601 ttcgtcgccg aacgcgccgc gatactgcca gcgcaacgcg aacaaggtca gcgggatggc
      661 tgccgcaacg gtcgcgaatg cgagcgagta acggagcagt tgcttggcat gagcaagcag
      721 cgaggcggct gcgggccagg catgacggcg tgccaggacc gccagcgcgg gaaggcttgg
      781 caccaaggtt ccgcaagcga aggccagtcc cgcggccgcg gggttaccgc ggaacgcgaa
      841 ccaggccgcg cctgccgccc cggctagcaa gcccgcgctc tggatggcga ggctggaaat
      901 cattcggccc tggcccgtga gcatgctgca gcgaatctgc cccggccccg cgaagatcgc
      961 gatcgcagtg agcgcgacga ccgttgcgcc gacgcttccg tggccgacga ggatggtgcc
     1021 gatgaccgga gcgaacagga acgagaccgc gagaagcacg ccactggcgg cgagccagat
     1081 cgcggccgcg gctgcgaccg tctcctcaag ctcgcctgga gaacgggcag cggcgacctg
     1141 ccggatcaac ccgttctggg tgccgccgac ggcaagcagc gtcacaaggg acgcgaaggc
     1201 gagatattgg gtgaaatcag caaatccagc gacgctgagc cggcttgccg ccaccttgag
     1261 caggatcagt gcgcagccga tcctgaggaa gaaaaagacg ccgatcgcgc caagccgccc
     1321 gatcatcgcg cgggctctgg cgctgcaatc ggaagcgcgg cgaacacgcg ccgggtcgac
     1381 cggtgccacc accagatcgc cagccatgcg aagaagatcg aatagccttc gtaggccgcg
     1441 aatacctggt tgttggccgg gaggtaaaag accatcgtcg tcgcctggac gaacaggacg
     1501 gcggcagggt cgctcatccc cgctgcagcc tcccgccacc acaatcccca ggcgaagccg
     1561 agcaagccga gaaccgcgac cgcgcctgca aagccgatgt cgttcgcgat ccaggtgatc
     1621 agggtcgacc agtaggattc ctccggccat tggtcgaagc cgttccggta agtgtaagtg
     1681 cgtcggtgcg gcttctcgtc gccagttgcc gcctcgtaca ccgagagcgc agccggcgag
     1741 tgcccgactc cgagcgagga ttcgaacggc ttctcgagcg caaggtgaag cccgaaatag
     1801 cccgagctgg tcgacaggat gaaaacgctc agcccgaacc gttcgcgcaa aggaagccag
     1861 gcgatgaccg ggtggtcgat gtcggcgcag atgcggctgt tgttcgcgca gacgagtgcc
     1921 ttgttttcaa ttccgccaag ccgttcgtcc ttgcgctctg tgaagagccc ctgcgcggcg
     1981 aacaggaagg ccacgccgag gattgcgggc agccagtagc ggcgggcgag ctggctgcgg
     2041 ctgcgcgaca gggtcatcgc ccggcccatc gaaacaagca aagcggcaac gccgatgacg
     2101 aataggtcgg cgatttcctt gtcggtcccg cgcatgatcg aaaagacgat cgagcaggcg
     2161 acggccacgc cgaccgcggc tcggccaagc cacccgatcc gccgccaatg aatgactccg
     2221 agcggaagaa ccgcgtacat cagcggtccg gcaaggaacc gcatcgccac catgaaggcc
     2281 cgctgcccct cgccgaaata gagttggatc tgcagtcgcc ggtaggcttc gccctggttc
     2341 tggagcgcgt ccataagttc ccacggcccc cgtccggtat aggcgaggca ggacgggatc
     2401 agcagtgccg ccgaagcagc ggcccccgcg gccagcaaca gctttattcc cggaagcggc
     2461 gcggccagct gggtcgaacc ggccgacccc gtcatcgccc cgacgtacag cacgaacagg
     2521 cacatcagga cgtaaaggac gaggttcgtc cagtcccacg ctccgtagat cggccagtcg
     2581 atcggccagg cgaggaatag cacgaaggtg agtacgacgt agccgaggac ggcgaacagc
     2641 ggcgcccggg tgatcccgga tttcgaggcc acggggaaca gccgagccgg ttctgcaacg
     2701 gggagcgtag cggccgtcat ttcatccgac cgcgcggctc attgccgcgt cgacggtcgc
     2761 cagcgtcgac gacatcccgg acgcgaacga gagattgtct aggtagaagc ggcgccccgc
     2821 cgcgcccatc gactcccgcc gctcgagtga aaggtcggcc atctcggcga tcgcctcgct
     2881 cagggcgacg ggatcgtcgg gcgccacaac gattgccgca cagcttcttc cgagcaaatc
     2941 ggccgcctct cctccgaccg cggcgacgat cgggcggccg taggagagat aggcctgggt
     3001 cttggaagga acggtgatcc tgaacagagg ctcatcgcgc aagtgcagga gaagcgcgtc
     3061 cgaaccggcg acgacatcgt cgagttcggc cggtgatatt cgaggctcga tggaaatccc
     3121 ggtaatcccg cggacctttt ttcgaagggc ttcggcctcc acgccgtcac cgatgaggcg
     3181 aatgtcgatg tcttgccggc gcctcgatag cagttcggca gccgcgacca cggtggccaa
     3241 gccctgcgcg cggccgaaat tgccagcgta gacgatggcg aagcgtccgc cctcttcatt
     3301 ggcgtcccgg agcgaagacc gagtgtcttc ctggacggcc caattgtaga ttgtgctgat
     3361 ctttcgctcg ggcacgcctc tttcgacgag cgcccggcac attccgctgg attgcgcgat
     3421 gatcagttcc gatctgcgat agacaaacca gcaggcgaag ccgagcggtc cggcgagcat
     3481 tccggcgccg cgaagcccgg tggtggcgac ggtgtcgggc cacaaatcct ggacgtcgag
     3541 cacgaacggc agctttcgca cgcagccggc tagtgcggcg gcaaggccga ccgtgatcgg
     3601 cgggtgatag acgtaggcaa ggtcgtagcg gccggctcgg aataggcagt aggccagcgc
     3661 tgagaggaag aaagacagaa aggtcaggga ccttcgaacc gccgacgaat cgtggcttgg
     3721 ataaagtggc aaccggacga tccggacccc atcgatttcc tcgtgctgga tcagtcgaag
     3781 gcgatatccg ggatagattc ggccggtggg ataattgggc aagccggtga cgacggtgac
     3841 ctcgtgcccg gcggcctgaa gctcggtgac gaaggccaat cccttgatga tgttcggctc
     3901 gggctcgaac cattgcgtca ggtagaggat ccgcatccgc cctcggcgct cctgccgttt
     3961 ttaaacccca gacgccgccc cgggaactta cctcaagacg cgctcgatac gggttagtgg
     4021 gcagagaggg ggttccgagt tcatgcttgc caccaaccag ccggttccct tcttcgactg
     4081 gggctcactc tacgccgaaa agtccgatcg ctacgcccgg atcatgcacg agacggccgc
     4141 cgccggcggc ttcatcctcc acgatgctgt tgcgcaattc gagcgcgagc tggcagccta
     4201 tatcggcgtt aggcacgcga ttgcgctttc ggactgctca aatgcgatgc tgctcggcct
     4261 tcgcgccagc cgcctccagc cgggcgatga ggtcatcctt ccaggtcacg ccttcatcgc
     4321 tgcagcgcaa gcgatccacc atgctggcgg aagggcggtg ccggtcgaca tgtgcccgga
     4381 cggacgccat gtcgatccgg ccgccgtgcg cgccgcgatc actccgcgga ccaagggcct
     4441 gatgatggtc tatgtcagcg gtaccgtctg cgacatggat gcaattcgcg ccattgccga
     4501 cgagcatggc ctgccgatct tcgaggacgc agcccaggcg ctgggggcgc ggttcggcgg
     4561 gacgatggcg ggcctcttcg gccaatgggc tgcgttcagc ttctatccgt ccaagacgct
     4621 tggctgcttc ggcgacgccg gggcgctcgt caccgacgat gacgaaatcg ccgcccgggt
     4681 tcgcgcctcg cgcaatcatg gagccgggcc cgacaaggcg atcagcgagg attgcgacat
     4741 ctggggcacc aactcgcgga tggacaatct ccatgccgcg atcctcgtcg agaagctggg
     4801 ctggtatgac gaggcgatcg cccggaggcg cgaaatcgcg cttcagtatc acgattcgct
     4861 ttccgacctt tccggcctgc agctgccgcc ccgtcccggc gaggatccgc gccgcttcga
     4921 catcttccag aacttcgaca tttgctgcga acgccgcgac gagttgaagg agcatctcgc
     4981 gacccacggc atcggcacga tcgtgcactg gggcgggatc ggacttcacc ggttccgaaa
     5041 tctcggcctc ggcgggtcgc ttccgaacac cgaccgcttc ctcgatcgcg ctctgcttct
     5101 gccgatgaac cacgtccttc gcgacgacca ggtgttgcgg accatcaccg ccgttcgatc
     5161 cttcttctga tggcgaccgc gcttctccag caagacgaca gcttggcgct ggcgctgcgg
     5221 cttcgtcgtc acgtcgtccg gatgtgcaag ctcggcggaa gctcgcatgt cggctcctgc
     5281 ctttcgatcg ccgacatcgt cgccgtgctc tacggtgagg tactccggct cgacccgctg
     5341 cggccggact ggaccgcgcg cgatcgcttc atcctgtcga agggacatgc cggcgcgtgc
     5401 atctatgcgg cgctcgccga gcgcggattt tttcccgtga gcgagcttgc ggatcactac
     5461 cgcaacggtt cgaaattctc cggccacgtc agcagcaagg gcgttgccgg agttgaattt
     5521 tcgacagggt cgctcggcca tgggctcggg gtcggcgccg ggatggcgct ccagctgcgg
     5581 cgcctgggcg gcggccagcg aacattcgtg ctgatgagcg acggcgaatg cgatgaaggc
     5641 tcggtgtggg aggcggcgct gttcgccgct caccggcgcc tcggccggct gtgcgcaatc
     5701 atcgacttca acaagctgca gagcctcgcc ccggtcgccg acacgctcgc cctcgagccg
     5761 ctcggcgcca agtggcgcgc gttcggctgg cgggtcgttc gaatcgacgg tcacgaccat
     5821 gccgcccttc gatcggcgct cgcaacgccc tccgcggctg acgacaggcc gctctgcgtc
     5881 attgccgaca ccgtcaaagg caagggcgtt tctttcatgg agaaccaggt cctgtggcat
     5941 taccgggtgc cggccggcga ggaattcgcc gccgcaatgc gcgagctcgg cgccgatgcg
     6001 tgatgcgttc gtcgaggcgc tgaccgagct caccgcagaa gatccgtcgg tggtgctggt
     6061 gaccggcgat ctcgggttcg gagtcctgac cgactatgcc gcgcgcttcc cggacaattt
     6121 cgtcaatgcc ggagttgccg agcagaacat gaccgcgctc gcctgcggaa tggcgctcga
     6181 aggtgcgcgt gcctacacct attcgatcgc gaatttcccg acgcttcgtt gcctggagca
     6241 actccgcaac gacgtctgct accacggcgc gacagtgact gtggtcgccg tcggcggcgg
     6301 cttttcctac ggccagctcg gaatgtcgca tttcgcgacc gaggacctcg cgatcatgcg
     6361 cgcgatcccg ggaatgaccg tggtcgcccc gtccgacccg tggatggcgt acgaactcgc
     6421 gaggcagctc taccgaaccg gcggccccgc atacgttcgc ctcgacaagg gcaaggccgg
     6481 cctgccggcg ggccccgtcg agctcggcaa ggtacgaacg gtccgcgaag gcgaggatgg
     6541 agtcatcttc gcgacgggtg ggattctggc cgaggccctt gccgccgcgg acctgcttgc
     6601 ggaccaaggt atttctgtcg ccgtcgtcga tgtgcacacg ctcaagccct tcgatgaatc
     6661 gggcgtgcgc agggcagcga agggccgacc catcgtcgtc accctcgaag agcataacat
     6721 agccggcggg ctcggaagcg ccgtcgccga agcgcttctc gaaggcgggg cggcgccccg
     6781 caagttccgg cgcatcggcc tcgccgactg cttccccgag gttgtcgggg accaggacta
     6841 tctgcgcaag gcccatcaac tcgaccgcaa tgccgtcgtc gctgccttcc gggaggaatt
     6901 cgcgtttcaa tgagaaagcg tctttttgat atcggctttt cgctcgtcgc cctcctgttt
     6961 ttgtggccgc tgctggcgat cgccgcattt gcgatctggt gccaggatgg gcggtcgcct
     7021 ttctatgtca gcccaagggt cggccgcgga aatcgcgact tcccgatgat caagcttcgc
     7081 accatggtcg ccggagctga tcggctcggc ggcgtttcaa ctgcgaaatc ggacacgcgt
     7141 gtcacgccgt tgggccgctt cttccgccgc tggaaagtcg acgagctgcc ccagttcatc
     7201 aacgtcctcg ccggccacat gagcgtcgtc gggccgcgcc cgaacgtgcg cgtcggaggc
     7261 gtcgaccgct acacttcgga ggagttggcc ctgctcgacg tccgaccggg cctgaccgac
     7321 ctcgcgtcga tcgtcttcgc cgacgaggcc gagatcctcg agggctcgag cgacgtcgag
     7381 gcgacctaca acctgctgat ccgcccgtgg aaatgccggc tcggcctgct ctacatcggc
     7441 cgcggcacgc ttgctgcgga cctggtgctg acagccctca ccatggtcgc gatcgtcgcc
     7501 cggccgcttg cattgtcgct tctcgacggc cttctggtgc gctggggcgc cgacacttcg
     7561 acccgcgagc tatgccttcg ccaggagccg ctgggcgcat tcgtcatcga gggcgagcct
     7621 tcgtgagcgt ctgcttcctc cttcgcgacg gcgctgaacc gccgcgggag gacgtcggcc
     7681 ttccagccgg aatgacgttg cagctctggc gcccgagcga cgaagcggcg cttccactgt
     7741 cgccattcga ccccttgcgg gtcgccgtgt ggcttcagga caggtgcggc ctgttcgccg
     7801 accgccgcta caccgaattg agcatctggc gcggtggcaa gcggatccat cggcttatcg
     7861 ttacgccgcg ttggcatcgc ttcccgttca tggagcccgg cgacctccag ctcggaggct
     7921 tgtggaccga tccctcgtgg cggcggcgcg ggctcgcccg atggacgatg aaccgggcgc
     7981 accgcctttt cggcgctccg ggccagcggt tctggtacgt gaccgacagc tccaacgcag
     8041 cgtcgacggc gctcgccgaa gcagcaggtt accaaatcgt cggcgaaggc cggcggacaa
     8101 ggcccgcggg cctcgccctc ctcggccgct tccggctcga ccgtccctgc gtcgactcct
     8161 gaccggcgat cactgcctgg cgatccggac gtgatccacc cgccccgatt gaggggcaag
     8221 agcggggcgg actgcgagcg acagccactg ggccgggcaa ccggcgggga ccgcgaaccg
     8281 ggaggccgac cgcccattgc tgtcaggcac gagggcgatg gtggcgatga ctcgctcttg
     8341 cccggcgcag gacagcaccc acagaggcgg agcgtccgac cgctgcgccg gcgaggctcc
     8401 ggtttcgagc acgtaccggc cctgctgaag catcagaagc tgcgccgcga cctggccgcc
     8461 ctcggcggaa ttggcatgat aggcgaggac ggagcggcca tcctccacat cgcgggaggc
     8521 gccgatctcc cgggtatcgg tgatccccca tccgaatgga tagcgtgcgg ccgggttgtc
     8581 gaactggcca tcggccacca gcggagcctc gttggcgttc gaggcgaacg cccggtcggt
     8641 tcgccctgcg agcgaaaact gcccgtcgtc gaccagccgc gcgatcacgg tccgatcgag
     8701 ctcgttcttc aaaatgagtc gccggtcgcg cacggcgagg aaaagggcgg cggccgactc
     8761 cggctctgct ctttccgcca aatagatcag gaacgcttcg cgccagtcgc tggggcgatc
     8821 gaccagggcg gcaatcggct cgaccagggc agcgtcttca agtccgcggg cgagggccgg
     8881 gaatacgagc gttggagccg ctgacgacgt gcgcagcgcg atgtccatgt gggcaagcgt
     8941 cgccgccacg tcgccgcgct cgacagcctc ctgcgcaagc cagagacgcg tggggaggct
     9001 tcggcggctg atccggtcgg aaaggcggta gagccgggcg gccgccgggg gatcgccgcg
     9061 gctttcgcgc gctagcgcaa gcatctcgat ccccgccgga atcgtgacgt cgcggcgcag
     9121 cgccttgccg acgagcgcct gtaccgcagg gtcggccgga tcggcgcctt gcgcaaggag
     9181 gtctcgagcg ctgtccagcg ccgaccgcgc tccgccaggg gcgcgcgcac cggcgacata
     9241 ggcagcgcag aggagcgccg cagccgcgat cgccgaacgc gcgaccgctc tcggcattgc
     9301 actacgccgc cttggcggcg ccgccctcgc catagccgta accgtagcca taatcgtaag
     9361 agaatccccg cctggtcacg tccagcttgg tcacgatcgc gccgatcagg ttggcccggg
     9421 cctcgcgcag gcgctcgacc gcggtcttgg cgactccggc gcgcgtgacc cccgattcga
     9481 cgacgaacac caccgcctcg accgccgagg cgaccagcga cgcgtcggca aggccaagga
     9541 cgggtggaga gtcgatgacg acatggtcga aatcctcgag caggccgtcg accaggtggt
     9601 gaagcccgtc gcccatcagc aggtcggccg tgctcggcgg gtgcggtcct gcggtgatga
     9661 tcgacagccc gtcccaactg gtctcgtgcc gcaggttggc gccgtcggga tcgcctgcca
     9721 gcaggttgct cagccccgcc tcgttggcga gtccgaacat gtggtggagc gaaggcgaac
     9781 gcatgtcggc gtcaatcaca actacacgct tgttgccgcg ggccagcagc cgcgccaatg
     9841 cgatcgcgct tgtcgacttg ccctcctgcg ccctcgtgct ggtgaaggcg atggacctcg
     9901 gcatcccctg ggcagtcgca agtttgaggt tcgcctggac ggcaacatag ccttcgacca
     9961 gcggcgatcg gggattgtcc agctcctcga tcggcgtgct gttcttgacc agcggaagca
    10021 ctccgataag cggcaggccg agcttcgcgc ggacgttttc gggatcgccg atcgtctcgt
    10081 cgatctggct cagcgcaacg gcaattccga tcccggcaag gccgccggca aacatcgcca
    10141 ccagcaagtt gaccagcagc cgagggctga cgggccggtc gggaagcttg ggccggttta
    10201 tgattgcgat attgttgtcc tggacgttcc cggcgacacc gatctctttg tagcgctgaa
    10261 gcagggaatc gtagagctgc cgattggtgt cggcatcgcg cagatacatg ttgtactgga
    10321 tgctgcgcct gcggacatcg ttgacctggc ccttcagccc cgcgacctga gacgcgagcg
    10381 agccttcgcg gctcgccgca gaccggtaat tctgtaccag cagcgcgcgc gttcgtgcga
    10441 tctcgcgggc gatcgacgaa tcgatttcgt cgagctgtcc ggcgagtgcc ttcactttcg
    10501 ggtaggcgct tccgaactgg gacgcggtct tcgcatattc ggcggacact tcgcttcgct
    10561 ggcggcggag ttcgttgatc gcgggattgt tgaaggcttc ggtgctggca tccgcacgct
    10621 ggaggccgga gagctgcgac tgcgcagcaa tccggtccgc cgtggccacc gacagcgcct
    10681 ggttcagcgc ctgaagcttg tcggtcagcg gcgagcgggc gaccgagccg gactgctcgt
    10741 cttcgccggc ggcctgcggc aggttgatga tcccctgccg ggaagcatat tccaccgctg
    10801 cccgttcaga ggcctcaagc gtcccgcgca gcgcttcgat ccgtttctcg aggaagtcgc
    10861 gcgcatagct cgatgcctcg aagcggcgct ccatcgacaa cttgatgaaa ttgtcggccc
    10921 aggaggcggc gatgcgctgc gacagatcgg ggtcgggcgt agtggcggtg acgtcgacaa
    10981 ggctcgagcc gcgtaatggg gcgacggtga gatggtcgag caatatggct ccggctatct
    11041 cgcggcgctt cgccctgcgg tcttgcgcgc ctacgagctg cccggctttc tcgaattccg
    11101 cctcccggcc gaactgcgcg aagaaagcgg gatcgtcggc gacgtggagg tcctcggcaa
    11161 cccgttcagc gagcccggtt ccctgcaggc gtccgtattg ggtctggtag aattcctggt
    11221 cgccaatgct ggtttcgcgc tcgacgccct cgatcttcgt cacccgcgcg gtgtcgcgcg
    11281 agatctcgag ccggactgtc gaggcatatt gccgggtcat taacacggtc gcggcaagcc
    11341 cgaggaccag gcccgccagc agtgccgacg cgatgatcca gcgccagcgc gtcaggaaac
    11401 caagcagacg cttgagctga ggttcccgcg ctggaccccc ggtggcgccg ggaccggcga
    11461 cgatcggaac ctggccggtg agccagggga gtgcttcggg cgagatcgcg tccatcacgg
    11521 aagcctttga agagcgagga cgatgggagt cgtcagcagc ggtaatgact ggacgaactg
    11581 ctgaagcttg cgcctggcga cggagtcgcc gacgacgacg acatcattcg gatagacgtg
    11641 cggatcggcg tagaggccgt ggcggatcgc atcgagatcg tacagcgccg caagcgatcg
    11701 cccgtcgacg gtgcggaaga tgacgacgtc gttgaggcgc gcatattcgt tgaggccctt
    11761 ggccctggcg accgcgcgca tcagggtgag gtcgggagcg gcggtatagt cgccgggcgc
    11821 gttgacctga ccgtcgatcg tgtaggacag gctatcggcc tcatccacgt tgaccgcgac
    11881 ctgcgggtca ttgatgaact tcccgcttct cagccggtcc tggatttgta ccgaaagctg
    11941 cgcgggggtc agccccgcgg ccgtcacttc gccgacgtag ggaaggacga ttcgcccagc
    12001 gctgtcggtt cggaagactc cggtcagctc gggcgtgtcg gcgacgatca acgagacctt
    12061 gtcgagggcg gcgatccggt aatcgaaggc tccggtcgcg gagttgaagc cgctcggagg
    12121 gggcagttcc gtcagcttgg tgacgaccat cggcgagtcg ctctcgccga gacgcgggcc
    12181 gttcgaacat gccgagagaa ggagacaggt tgaggcgagt gcaacgctca atcgtgcaag
    12241 ggtcatagcg ctactccaag agcgatctgg aacacggtct gcgcctggaa cgggtcaatt
    12301 ccgaggtgcg tcgccctcac cccgcgtcgg cttcgaacgt tgagcgcttc ggccttcacg
    12361 gtgacgtggt cgttgacgag atatttgacc gcggcagtcc acgaccagcc gcgctcgctt
    12421 tccataggcg acatttggct cccgatctcg cgcgtcctga atgcctcgat ccgtccggcg
    12481 acattccact tgtcgtcgag ccggtgggat accaggacga aggcgctcct gaacttggtg
    12541 tggacccagc gcctgtcgtt ttgcgggaag cccattatgg tcgatccggt cattccctgt
    12601 gcgagcagcc gcgtgttgct cccgatgtcg gcgttgaccc cgaggttcca gaaacgcgtc
    12661 cgccatcccc actgcccggc cggggtgaag gcttcggggt caccgcgatt gtcgtaatag
    12721 aagagggcgg cgccgaacgg ggccggcgga cgccagtcga gccggccgta gaagccgggc
    12781 cggtcgtcga tctccagcag cgaccgagtg cggtcctcct gcaggtggct gatgaactcg
    12841 ttgaacggcg gcagctcgaa atagccgaag gcggtcgctt tctcgtcgtg aagcgcccat
    12901 ccccggaagg acagcaaggt gccggacgtg tcgttgaatc cgaacacccc gccggtcagc
    12961 gcgaacgtgt gctggccgag atcggtgcga accgttcctt cgagcccgag caccttgacc
    13021 tcctcgccga cccacgagtt gatcgccgag ggcgtgatgg tgtcgacgac gctccacgcg
    13081 ccgccggtgg agtgttcgag cgagatctcc ggccacatga gtcccgcgcg caggtggacc
    13141 cctatgggcc ccgtttgcgg cggcaggaaa ttgacgaacg cctccatcac gtcgaactca
    13201 ttgtcctggt cccgttgcca gccggccgac acattggcgc tcagcgacct ggtcaaccgc
    13261 ggggtccaga tgatcgctgc ttcaactggc acggcgtaga gctcgtaatc gccgtcgctt
    13321 gtgccgtcga agcgggtctt gcccagcccg cgatcggtcc acgaccgctc gccattggca
    13381 gctaccagcc tcgcgtcgaa cagaacccgg accgtgtttc gggagaggat gtcggtcccg
    13441 cccccgtcgt cgcttgcggc catggtctcg tcggccggct cggtctggct atcggtgtcg
    13501 ggcgctgtcg aatcctgctg cgcctcgtcc gcgggctccg cgcgctcgat ttcctgcgcg
    13561 gccgcgggcg agctcgccgt ggcggcaatc gctgccgaac atccgagcaa aaaggcagcc
    13621 ctggtcttct tcgcaatcat cgcgatcccc tgttgcgtga cgttggttcg gcgttcgtcc
    13681 agcgggtgac tccgccgacg gtcattcggc gacccgcgac gcccacggac tggagctggc
    13741 gggcggcctc cgaagccgcc acgcgcggca cgccgtcgac gacgaccaac cggacgtggc
    13801 cggccgtggc ctcgagcagc ggagcggcga gcaggatgaa gtcggcgggc gcgccaggtt
    13861 cgagcttcgg gttcgcaacc cgcagccgtc gtgccgcgac ctcgccgacg gcgccttcaa
    13921 ggcgttcgtc gtcgagccgc ccgaccgtcc gcgcaaagcg gatttcgtcg aggaggttgc
    13981 ccgcgcccgt aaccagcgag tcgcttccaa gaaggacgtc ggtggcggcc ccgaacaggg
    14041 tctccggcgc ggttcggccg aacaggaaat ggttagatgt cgggcaccag atgatcgctg
    14101 ctccggaagc gcgcagtcgc tcggcacctt cggctcccgg accgactgcg tggaccgcca
    14161 gcaggtatcg gttgagaagg ccggcccggt cgatgatctc gacttctccg gcagcctcgt
    14221 cgtccgtgcc ttcagcgacg tgaagagcat aggctgaacc gttcctccgg ttcgcgccaa
    14281 gcgctggcgt aaagcttacg gaatcgtcgt tggcgacgcg gatcacccgc agcgggaaat
    14341 cacggtccag ctcgtcgtcc cagcggtcgt ggtggactgc cgaggttacg cccgcgaaca
    14401 ggttcttcca ggctcccgcc aggtaggcgt cgcggcgggg aagcgcgcgg ccccgctcaa
    14461 tccgccggcg atggcggacc tggatgtcgc gcgcccaatg cgtcgcgttg cggtacggcg
    14521 gcttgccgag cctcccgtaa tggttgcgat ggagatgctc gtgggaattg ataaggcccg
    14581 gacgaacgtc ggagtcgcgg cagtcgagga caatgtcgaa cctgccttcg ggcgcgcaga
    14641 ttcgatcgcc gtcgcaggcg acgtcggcgt tgcgggctcg gaccagcatg cgcacctgct
    14701 cagcgcctct cgaaccgaag cgcgaacacg agcgggatgc ccatgtcatg ttcgtagtct
    14761 gcgagccgcc cacgctcggc gtagagatgc cgaacaggcg ggccgacccg gccctcggac
    14821 tgatcgacaa aagcgagccc gcaccgcccg gccaccgcgg catggtccgc gatcgagtgc
    14881 gcgtagttgg tgatttcgtg aacacccgac gcgcttcgga aagtgcggcg atggccgcga
    14941 gcttctgcgt cgggatgaaa gtcgctgacg acgagtgtcc cgccgaccgc gagggctcgt
    15001 gccatctccg aatagggtgc ggctaggccg gcgatgtgcc ccagtacgag acggcaccag
    15061 ataacgtcga agcttccgtc gcccaccggc agattgccgg catggccttc aaggattcgc
    15121 acgcctgcgc ggccggccgc gttgacagcg cccgctgcga tcatttcgcg gcacggctcg
    15181 acccccgttg cagaggcggc gccggcgacg atcagccgcc gcgccgttcc gcagccgaca
    15241 tcgagtagtc gccggcccgg tagcggcggc gtcaattcgg aaacaagcga attgtccaga
    15301 agcgaaacgg ccgtttcccg atcataggtc ggagcccaca gggaataggc ctctgcagga
    15361 tccaggaccg gcaattgggc agtttcgagc acgtgccctc ccacgctagc tgtaatcagt
    15421 tccagcgagc gcgcccgggg ttcaagcgag cgccggtgag gagggtgcgg aaaagctgcc
    15481 ggtcggattg aacctgcgcg cgcacgagcg ggaccaagtc ttcggaccgg atttcccggt
    15541 cgctcagaag gggtctgcca tgaacctgct gaaagtggtc gcgacggccg ccgtagcctc
    15601 gctgctcgct acgccaggct atgccgaacc ggccaatcct gcgggcaagc tgacgctggc
    15661 gtcgaaggca caacctgccg gcgctccggc caatgcgcgt agcactgtga aatcgccgaa
    15721 atcgtcgact ctgccgctca tcgcgatcgg cactgcactg gttgtcggcg ccgcgctgct
    15781 gctcggtaac aacgacagca agccggcgag taactgaccg gatcccgcca ggtggccgca
    15841 tcgccgttgc gagcgtcggc cggccatggg gggaaccaat ttatcggatc atcccgctac
    15901 cgcttggcgg tggcgggctt gctcgtgctt gccgttaccc ttgccggtgg cgcctccaga
    15961 gcgggcgagc ccgcgcagct cgcagctcgt tttgccgcta tcgtggcgat cgccgcgact
    16021 ctgtggccgc tcgacttcgc tatgctccga agacatcggc cacttgcgct gtttgcgctc
    16081 gcctgcgtgg cgctgccgat ggcccatctc atccccttgc cgccagcctt gtgggcgacg
    16141 ctcccaggcc acgccgccta cgcgcaaatc gccggtgcca ctgcaacgga agggtggcgg
    16201 ccgctcagcc ttacgcccga tctgaccgcc aacgctctgc aggcattgct cgtccctgcc
    16261 gccgccctcc ttgcggcact ccatctcgca gcggcggatc gcaagacact cgcgattctg
    16321 tttatcgctg ccgccgtggc gagcgcgatg ctagggctcg cccagctcgg agtcggcggc
    16381 aaccagctgc ggctcttcga gcaaagcagc gaagatgcgc cggtcggctt gttcgccaac
    16441 cgcaatcacc aggcggcgtt cctcgcctgc gcgcttccgc tatgcgccgc cgttcttcca
    16501 cgaacgggtg acccgcgctc atgggcggtg atggccgcga ttttcgttcc tgccgcgctt
    16561 atggtcagcg ccgtgacctt gctgaccggt tcccggatgg gcgctttgtc gctcgctttc
    16621 gctgtcctcg ggaccggatg gatcctgaac gctcgcggcc tgctccgtcg cccggcaagc
    16681 cgatcggttc tcgcggcatg gtgggcttgc ggattggcaa tcgccctgat cgccggcgcg
    16741 gtgcttctcg agagcggaat ccttgacagg ttcggcggcg aagacatcgc tgccgacatc
    16801 cggggggcgg ctcttccgtc gctggtcgcg actgccgccg ccttctttcc gactggcgcc
    16861 gggttcggcg cgttcgacag cgtctatcgg cagttcgagc ccgatgcgct gctttcgacg
    16921 atctacctca accaggccca caacgagccg ctccagctgc tcattgaagg cggcattccg
    16981 gcactgcttc tcctgctcct gttcattctg tggtgggcga gaacctcggt ggcgatcgtt
    17041 cggggcgagg gagaggcgtc gcggcgcagc ttgccccgcg cagcactcgt cgtgacggcc
    17101 gtgctgatgg cgtccagcct cgtcgactat ccgctgcgca ctccgttgct tgcggcgctg
    17161 ttcgctttct gctgtgccga gatggcgctt gcggccgccc gggaccggcg tttgggagag
    17221 tccggttgag ccgcagcacc ctgggctcga aggggggatc ggcgtggcgc tggcgcctgt
    17281 cgccgggcgg cctccttcgt gaactgcttg cccggcgcgg aaccatcgag gcgccgcttt
    17341 acggcgagtc ggcaagcgac ctcgcactta ttcgcgaaac ccggtgccga gtcccgctgc
    17401 tgctcagcga tattgctgcg ctgcacgtcc tgctttgcgc cagggccgca gcgaggctcg
    17461 gcggctcgat ggcggaggcc ggagtgctaa tgggcggaag cgcaaggctg atctgcgagg
    17521 tgaaggggac ggccgacctg cacctgttcg acacgttcga cggtccgctt gaggaggaac
    17581 cgggcggcat gagccgacag gcggccgagc tccgtggtca tttcggcgac atttccggac
    17641 agcttgctgt cgtccgcgac cttctccagc cttatccggg cgtctgcatt cattcgggca
    17701 ttttcccggc gaccgcttca gggctcaagg accagcgata ttccttcgtg cacctcgaca
    17761 tggacctcgc ctcgagcacc cgtgccgccc tcgactattt ccatccgcgc ctgatgcccg
    17821 gcggaatcct ggtcggagac gattacaacg atccgggcgt tgccggggtg ttcagggcct
    17881 tctttgcaag ccgcaaggac tcgctgatcg agctgccgtg gggacaagtg atcgtggcaa
    17941 ggacggaggg ttaggagcca accttcaaag tcccgcgcat cgccggatga tagacgcagt
    18001 aaaaggggaa gttccctgcc gtcgtgagag tctgcgaggc gcgcttgccc gatgcgattc
    18061 gaacgtcgaa cttgcggtcc ttcgcggtta ccgtgtgcgg gacggtgtcc ttgttgaccc
    18121 acacgatcgt gtcgccaacc ttcaggttgg aaggcagcgg cccgtagcgc atttgcgaca
    18181 tggtgacggt gtaggttgtg cctttcccgg ccgcgagcgc atcggcccca tacacgagga
    18241 acagggcagc ggcgccagct gcggcgcggc ttgaaaaagc tatccagttc tgggccattg
    18301 gcgattttcc ttgtgcaaac ctcacctgca cttggtcccc cgccgaatga tatccgttca
    18361 ctcgctcgcg acggacggtg gcgtaccggc gatgcccgaa tatcaaaagc ttaggcttgc
    18421 accggcgacg atcgccgtct tggaatggct ggcgccataa taatattggc ggcccggccc
    18481 tccgccggtg agggctgcgt gaatttcgag attgccgatc tcgcgcgtaa cgccgagccg
    18541 ccagtcgtag aggcttttgc ggcgtaccgt gtactgcggc ggcgtgtcga catagttgag
    18601 actaccgaca tgggcggtca ggtgccagtt ctcggccggg ctcaccgacg cctcgagctg
    18661 gccgtagacg gtccagaagt cggatcggaa atagttcggt gagacgaaca cgtaagccga
    18721 gaacggtgcc cgcgtcgcgc ccgcgtaaag ctcggtgtag gtgtagggat agccgccgtc
    18781 ataggcagcc cggatttcgt tgtgggcaat tccgaaatcc acggtccaga agtgaccgac
    18841 gcgcttcgcg attccgccgc ccacttgata cgcgagaaat cgcgggtcct cgccgcgggt
    18901 aagaaccgcg gtcgccgacc cggaggcgta gactccggat tcgtcatcca gtcccaggcg
    18961 tagcgaggcg actggcctgc cagcgctcat cgacaggccg cgcagccgaa aatcgctctc
    19021 gaccgcgatc gctcccgaaa cctgggcggc agcaggattg cccgtgcaga gcgcaagcgc
    19081 ggcaatggga agggaccaga tttgtaaatt cagagcgcgg cgttcaagag cgcggggaag
    19141 tccccgcggc gccggctcaa cggcagcgcg gcgacttgcc gataatcgtg aggcaagcct
    19201 ggactttacc atcgctcgcc cgaacaagcc ttgcgccaaa ccgcccttta cccttctcac
    19261 ccgccaaggc agcgagtccg ctaacctggg caacggcata cgacgtgcca ttgacgagac
    19321 tccacccacc tcccggttga gtggtcggca agtctcgccc gggcgcaccg tacacaccat
    19381 cgggcatcct ttgaagcgac tcatcggcaa cgggaatgac gccttccatc gaggccggga
    19441 aacccccgcc cggcaagctc ctgtcgaagg ccgtgacgac ggtgacgttg cgggagaggg
    19501 caacgtccag caacttattg agcaacaggt cgcgcgggcc gctgaggctg aggttgatca
    19561 cgtcggcgtc cctatcgatc gcgaactgaa gggccttcgc cagcggcagc gatttgcaca
    19621 acgtttgacc ggacgccctg ccgcttcgta tttcttcgca cgcccttagc gccatgagcc
    19681 gtgcgcccgg ggcgactccg gcgataccta tgccgttacc cgccttcgcg ccgatgatac
    19741 cggctacatg cgtgccgtgt ctttccggac gcgctgccgg cgtctccaag aagttcctgt
    19801 cggcaatgaa ctggccggca aggtccgggt gcttcacgtc gacctggctg tcgacgatgg
    19861 caatcttcac cccgcgaccg gtggcgctgc ggtgaagttc gctaagcttc cattctgccg
    19921 cggtcggctg gatcaagtag agcgggtccc cgccgcctcc acctgcggcg gccccgatcg
    19981 cgtaagaata catccgctgc gaccatgcga ctccgcgttc cttcgaaacg gcttcgataa
    20041 ccttgtcgat cgacttgccg gccgggactg ccatcacata gcagtcgacg cccaggaccg
    20101 gcatgggcca gccttcgcgg agctggatac cgtagcgatt ggcgatgttc tgggcgaggc
    20161 gcttgcgagc agcccgcgag ctgatgtcgc cataattccc gccatagccg gaattcggtc
    20221 ggtgatgcgg cgccgccatt gtcagcatca ccaggatttg tcggtcctcg ccgtcggcct
    20281 ggacggattc cgccgccgac gcgggcgccg caatgccggc caatgcggcc agcagcagcg
    20341 ccagcatcat cgtcaagaga gggcgcaagc gctgagtcac ggctgcgtgt cgttagctac
    20401 cggctcggca agcacgacct ggctcgactc ccgaagcgcc cggatcgcgg gctcggggct
    20461 gccgttgtcg atgcgcagca cgtaggcccc cgcagccgtg gggccgtcga ccagccgggc
    20521 gccttgcgcc gcaaggatga cccgcatctg ctgctcggtc gtgtcaggct tgaacaacac
    20581 tacgacctgg ccgcccgctg acgaagcggc cgagccgagc gcgcgatagg tctggtccgg
    20641 aaccgcgtcg ggctgaaggc ttgtgacgac aaccgtcgcg gcgaccgcag cggccagcga
    20701 ggctgtcgca gcccagcgca tcggcacgct ctggctcagg aagccgaagc ggcccctgac
    20761 gacattgtcg gatcggcgat cagcaagacg ctgctccatt gctctccagc tgtcgtcgac
    20821 gttgagcggc aaagtcgcca cgtcgcgggc aagcttgcgg tcgaactcga gcgcctcgcg
    20881 gcactccgcg caatcggcaa gatgggcttt cacgcgcccg gcctcgctgt tggaaagcgt
    20941 gccgttcacg aaccagggca aaagctgctg aaccttgtca tgctcgcttg cccgaagtgg
    21001 gaaaatgtcg gccatgtcct cgtgaactcc tagacccagt cttccagtcc gccgtcgact
    21061 atgcggcgga gctggcggcg ggcgtgaaac attcgtgttt tcaccgttcc cacaggacaa
    21121 tcgaggatgc tcgcgatctc gttatagtcc aactcgtggt aataagtcag gtcgaccaca
    21181 gccctgtggg cgggcgacag ttccttcatt gcctccgcga taaggtcccg gcgcctgaca
    21241 ttttccgaac tgtcctccgg actatcgtcc tcgcttgggc ggttcggggc gtcgagatcc
    21301 tcgagcgggt cgtcgcagcg cttcagtcct ttcagtgcct tgcgataggc aattgcgaaa
    21361 atccaggtcg acagtttgct tccgccatgg aagctgtccg gccgctgcca gaccaccatc
    21421 atcgtgtcgt tcagcacttc ctcgaccagc tgcggtcggc gcaccatctt gatcaggaag
    21481 ttcgtcagcc gggggtggta ggcgcgatag agagtttcga acgcgtcatc gtctcccgac
    21541 ctgattttct ccagaagcag gagttcctcc ccgttcgagc cgcgcgacga tctcgcccgc
    21601 tcgactttcc ggacctgctt ttcgttcacg tctccagtct cgacctctca ttatactctc
    21661 gtgaatccgc attttatggg cggaggttca atgttccgcc ggattgcaat gctgtttctt
    21721 agtggcactg gaagcggtcg aacggctcct gacagctttt gcatcgccac tgcgccttgc
    21781 agggtgtcga gccgaagcgg ctgacctctt cggtttcact cgagccgcag cgcgggcagt
    21841 ccgccgtctc cgaggggctc ggcggagcaa tcccgtaggc ccggagccgc tcgtgaccgc
    21901 gccgagtgat ccaatcggtg gtccatggtg ggaaaagtac gcgttcgacg aacacctgcc
    21961 tgaatccggc tgaatcgagc gcagcgcgga tcgattgctc gatcgcgatt gtcgccgggc
    22021 atccggaata ggtcggagtg atcaggaccc gcggcgggtc gaccgtaact gcgcggacga
    22081 ttccgaggtc ggtgattgaa agcgccggga tctccggatc cgggaccatg tcgaggaccg
    22141 ccagaatcgc gtcttcgctg agctctgcga ccgccgtttc catggcgatt gttctacacc
    22201 cgttcgagcg cgagcgcgat tccctggccg acgccgatgc acatagtcgc gagcgcaagc
    22261 ttgccgccgg ttcgctggag ctgctcggtc gcggtgagtg cgagcctcgc gcccgacatt
    22321 ccaagtgggt ggccgagcgc gatcgcgccg ccgttagggt tcaccttctc cgagtcgtcg
    22381 gggaggccga gctggcggag aaccgccaat ccttgcgctg cgaaagcctc gttcaattcg
    22441 atcacgtcga aatcgccgat cttgaggccg agccgcttca taagtttttc cgacgccggc
    22501 gcgggaccga tccccatgat ccgcggcggt accccggcga cggcggcccc gaggattcga
    22561 gccttcggag tcagaccgtt gcgcttggca cattcttcgc tcgcgacaat tattgccgct
    22621 gcaccgtcgt tgactcccga cgcatttccg gcggtcacgc taccgccggg gcgaacgatc
    22681 gggcgcagct tcgcgagcgc ttcgaggctg gtggagcgcg ggtgctcgtc gctgtcgaca
    22741 acaagcggat cgcctttgcg ctgtgggatt tcgacgggga cgatctccgc cgcgaggcgg
    22801 ccgttcgcct gcgccgaagc agtgcgttgt tggcttcgaa gtgcgaaggc gtcctggtca
    22861 tcgcggctga tctggaactc ttcggcgaca ttttcggccg tgctcggcat cgtgtcgtcg
    22921 ccgtacgctt ccttcatctt cggattgacg aagcgccagc cgatggtcgt gtcgtatatt
    22981 tctgcgttgc ggctgaacgg cgcttccgcc ttcgccatca cgaagggcgc ccggctcatg
    23041 ctttccgagc cgcccgcgat tatcaggtcg gactcgccgc cccggatcgc cctcgcggcc
    23101 attgcgactg cgtcgagtcc ggagccgcac aggcggttga gagtcactcc gccggaactg
    23161 tccggaaggc ccgacaggag cgctgccatc cgcgccaggt tacggttgtc ctcgcccgcc
    23221 tggttggcgc agccgaggat gacgtcgtcg agctcggacc agttcacgtt cggattgcgg
    23281 tcgatcagtg ccttgatcgg gatcgccgcg agatcgtcgc cgcggacatg cgccagcgcg
    23341 ccgccgtagc ggccgatggg cgttcggacg taatcgcaga tgaaggcgtc ggtcagagca
    23401 cgccccgccg catctggtcg agctcgatgc tctcgaacag cgccttgaaa ttgccttcgc
    23461 cgaagccctc gttgcccttg cgctgaatga tctcgaagaa gatcgggccg atcacgttct
    23521 gggtgaagat ctgcaggaga aggccctggc cctcagtcgg cgcgccgtcc atcaggattc
    23581 gccgcttctc gagctcgggg atgctctcgt cgtgaccctg gatccgctca gggagcatct
    23641 cgtaataggt gtcgggcgta tcctggaacg gaatgccgcg cgcacggata atgtcgaccg
    23701 ccttgtagat gtcgtcactt ccgagcgcga tgtgctggat cccttcgcct ttgtattccc
    23761 gcaggaactc ctcgatctgg ctcttgtcgt cctggctctc gttgagcggg atgcgaatct
    23821 tgccgcaggg cgacgtcatg gctttcgaga agaggccggt ctgcttcccc tcgatgtcga
    23881 aataacggat ctcgcggaag ttgaagagcc gctcgtagaa gtcggcccac accgccatcc
    23941 ggccgcgctg aacattatgg gtcagatggt cgatataggt caggtgcgac gcatggtcgg
    24001 cctcgatttg ccgccaatcg tcgaagaaat cgaaatcgac gtcgtagatc gtgcccttct
    24061 cgccatagcg gtcgacgaag aaaagcagcg acccgccgat cccttctatc gcgggaatgt
    24121 ccagctctcc cttcccgacg tcggtcttcg cgggcgtccc gccaagcttt accgcgcgat
    24181 cgtaagcggc cttggcgtcc ttgacccgga atgccatcgc gcaggcgctg gggccgtgcg
    24241 ccctggcata gtcctcggca tagctgccgg gctcgctgtt gatgatgaag tgaatatcct
    24301 gctgcttgtg cagggtgacg tccttgcgct tgtgcctggc gaccgctgga aaacccatct
    24361 tggtgaacag gtcgcgcagt agctgcgggt cgggcgccgt atattcgacg aattcgaagc
    24421 cgtcggtgcc catcgggttc tcgagaccga ggacgctctt ttcctcgact gcggtggcca
    24481 tggtcattct cctttgcggc ccaactgctc cctgacgccg cctatttcaa gcgctcagcg
    24541 cttcagcttc gcgagctccg cgaaggcgtg gctgccgcct tgctggcgat cccggcgggc
    24601 gccgcggcgg cctcgccaac gccacgcgtc gccggccttg gcgaagccga tgtcgtccat
    24661 cagcctggcg accgcctgct cgtcgaggcc gaccgacgtc gcaagctcga tgtcgacggg
    24721 attgtcgccg cccgccgagc gaaccttgtg cgcgtggctt gccaggcggt cggcaaggtc
    24781 gatccgaatc cactcacgac cgatgcgccg gtaggcgagg gcagctccgc gcggatcgct
    24841 gtcggcggca agagtcgctg cgcctgcagc aggcaagtcg ggcatcggct cgcccgagcg
    24901 aaccgcaagg agcgccgcac gccacagttg cgccgcgggc ttgaggagcg ccggcacgaa
    24961 cacgtcaagc gggccaagcc tgaccttgag gctgtagaga agctgccggt ccttctgatc
    25021 caatgtgccg attgcgctga ccattgcccg gcggggaacc gagccaccgg aatccacgag
    25081 cattgccccg agtgcccgca ctcccggcga agtcgccgga tcggtggcga cttcggccaa
    25141 cttcctgagc gggcggaccg tgtcgtcgac ctgcgaatcg acccagcgtt cgagtcgagc
    25201 gcgaagcgtt gcacggctgg tcgtggagag ccggtcgagc gagcgcgcgg tccggagcgc
    25261 gggctcgagg agcgaccgtc ccggagcgag ccgggcgagg atgcttccat gccagccgac
    25321 gccgatcgcg ccgtttggct cgatttccag ggtaaactcg ctgtccggcg catcagcaag
    25381 cgaggacgcc cgccgctcca gttcctcacc caggcggcgc tcggccgccg cgagaagcag
    25441 cctcttgtcg gcgaacttgg ccgaagggtc gacccggaaa tcgaagccgg acaggtggcc
    25501 gatcggctcc ggcccgacgc tgacttcccc atccgcagcg acggtgaccg ggagcgcatc
    25561 cgatccgcga gcgccgatat cgcggaccag gaccgacgtg cggcgatcga cgaaacgctg
    25621 ggtcagccgc tcatggagcg cgtccgaaag ccgcgattcg acctcgcggg ttcgctcggc
    25681 ccatttcgac gggtctttga gccaatcggc gcgatgggcg atatacgccc agctccggat
    25741 tcccgcgagg cggtcggcga gggcctcgat gtctccattc atattgtcga gccgcgcgac
    25801 ttcggccgcg aaccattcgt gcggaatatg gccgccgtcg ccgatgtagc tgaagaccct
    25861 gcggaccatc cgcgcatggt gcatcgggcc caccttgcga aagtcgggca ggccgcaggc
    25921 agcccacaac cgccgggcgg cgcctccacg cctcacggcg attgcggggt cctcggcaat
    25981 gtgcctgagc actgcgaggt cgatagactc gggcgcggcg cggaggatcg ggtcctggct
    26041 tggagtttcg aggctggcga tgagcgagcg aacgtcggtg aaatcgagat cgggattgcg
    26101 ccagtagagg aaatcgagcg gccggaagcg atgctcctcg atcgaatcca cttcctgctc
    26161 ggaaaactcg gcgctgtggt cgccgagacc cagggtgccg aaggtgccgt ccttctggtg
    26221 gcggcccgct cggcccgcga tctgcgccat ttccgcgatc gtcagtcggc gatcgcggcg
    26281 accgtcgaac ttctcgaggc cggcgaaggc gacgtgggtg acgtccatgt tcaggcccat
    26341 gccgatggcg tcggtggcga ccaggtactc gccctcgccg cgctggaaca tcgctacctg
    26401 tgcattgcgg gtcgccggtg aaagggcacc catcacgacc gctgcaccgc cgcggaaccg
    26461 gcgaagcgcc tcggcgagcg cgtacacctg ctcagcggag aaggcgacga ccgccgagcg
    26521 cggcggcagg cgcgacagct tcgtgcttcc agcgaagcgg agcgtcgaaa agcgcgggcg
    26581 ggtgacgatt tccgtctccg gcaggagctc gcggatcatc ggctttagcg tttcggagcc
    26641 aaggatcagg gtctcttcgc ggccgcggac cctaagcatg cggtcggtga agacatggcc
    26701 gcgctcggga tcgatcccga tctgcgcttc gtcgatcgcg gcaaaggcga agtcccgctg
    26761 gaagtcgctc gcatcatgcc catcgccgcc cggcaccggc atgctctccg ccgtgcacag
    26821 gaaatagcgc gcgtcgggcg ggacgatccg ttcttcgccg gtcaggagcg ccactcggct
    26881 ctcgcccttg attcggacga ctcggtcgta aacctcgcgg gcgaggagcc gcagcgggaa
    26941 gccgatgacg ccggacgaat gcccgcacat ccgctcgatg gcgagatagg tcttgccggt
    27001 gttggtgggc cccaggatcg cccggaccgg ggagtcttcg cggcgcatga caggcacgaa
    27061 tgtggcagcg cggggcgaaa gcgcaagttc ccgattttaa acaggcttta accctgtttc
    27121 gcgcatcact gtccgagatg ttcgagggat ctccaggaac cgaggcttcg gcccgggtcg
    27181 cgctggcacg cgcgagggcc gattatgccc cgattccgga tagccccgag ccgttcagcc
    27241 tgattgtcga tctcgcttcc gagccgatcg gagcgcgctg ggctcgcggc gcggccacgc
    27301 tcgcgcttct gtgtgccgcc gcgctcgcaa tgactccgga cctcggactg ttctcgcctg
    27361 cgcaggcgca cccggtcgct ccggtccagc aattccggct caacccgatg cttggcagcg
    27421 gggtcgaaga cgctgtctcc gacgagccgg tgttcccagc cgatctcgaa gccgcgtcga
    27481 agccgcgcat tgtctccgac ggctcccaaa tccgcgtcca gggggcggta actgacggcc
    27541 tctactggtc tctccgcgaa gccggagtcg agccgcggat cgcggccgct tacctgcagg
    27601 cgcttgcgac ccggatcgac gtcggctccg atgtcgcgcc gttcgaccgt ttcgacctcg
    27661 tcgtctcgag gcgcgaaggc cggcccttgc tttacgccgc gcttcaccgc gtcgacggcc
    27721 ccgacgtcga gctgatgaaa tggcgatcgg gcgggaaggt caattggttc gacaccgacg
    27781 cgagcgccgc cgagcgctcg gcggccctga tgacccccgt cgccggccgg atcacctcag
    27841 gcttcggact gcgtcatcat ccgatcctgc gctattcgcg aatgcatgcc gggatcgact
    27901 tcggcgcttc gtggggaagc ccgatcgtcg ccgccgccga cggccaagtc gccgcagctg
    27961 gttggagcgg cggctacgga cgccaggtgc ggattgcgca tacggacggc atcgtcacta
    28021 cctattcgca catgagcggg atcgccgctt cgccgggcga aatggtccgt cagggacagg
    28081 tcatcggcta tgtcggttcg accggcctgt cgaccggacc gcacctgcat ttcgaggttc
    28141 ggctgaacgg ccgcgctgtc gacccgatgc aggtgcaact gcagcgccgc cagcagatca
    28201 gcggtcccga gcgcaaggcg ttcaacgcgc gcctcaggga gctgatggcg atcgggggga
    28261 aggtgtaggg cctagccggc tcaatcgttg cagtgcggcg atggatatgt tgccggaacg
    28321 cccgccgacc gatcccgttg tcaccgaaag caaatcttcg gagacattac atggcgaccg
    28381 atcgcgaaat agaaaacaag ttttgggacg agctcgacgg cagccccttc atcatgctcg
    28441 gaatagaggg tgagcgggat ggagcgaccc agccaatgac ggcaaatttc gaggacgttg
    28501 accgccaatc gggacgtctt tggttcttca ccgccaacga ccacgacctg acccgggcat
    28561 taggccagtc ggctggcgca atcgcggcct atgcgtccaa ggggcacgac cttttcgcca
    28621 gcctacgcgg tactgtcgcg atcgataacg atcgagccac gatagacagg ctttggaatc
    28681 ccgttgttgc ccaatggtac gcgagcaagg acgatcccaa gttagcggtg ctgaggtttg
    28741 atatccgcga cgccaagatt tggctcagcg atgtcgaggg cttcctccgg ccggcattga
    28801 acaagctgct cggacgcgag gaagaggcgg gcatcgacaa gaaagtcgca gagatcgagc
    28861 tttagcgcgg ggcgcggcct ggcagcacgc cgcctagcct tgactcaacg caattgaacc
    28921 gcctcggcac tcgcgtgttg cgccgggatg gaacagatta cctccgtcat tgctcccgtc
    28981 gccacgaccg tcgcagcgct tgtggtggca tccaatcttg gcgcccggat aaccggtttt
    29041 ggcttcgcca ttttcactgt cgggtcagtg gcctgggcga tactcgggtt gaccaccgat
    29101 cagccgagcc tgctgtggca gaacgtcgtg ctcacggggc tcaacatttt cgggatctgg
    29161 cgttggttag gttggcaggc ccgcatcgcg gaaggcggca tgagcgctgc cgaagacagc
    29221 cgagaggaac cgggcgagtc gctttttccg gtgtcgctgc tgatgaacgg cgatgtcgtc
    29281 tcggcggatg ggtcggaaat cggtcatgcg gtcgacgcca tggcaggctg cacgagcggc
    29341 cgaattgcct atctcgtcgt cgccgagggc ggagtggccg gagtcggcca gactctccgg
    29401 cggttgccct gggatcaatc cgcggtgcac gaggacaagg ttaatgtgtc gatcgaccga
    29461 tcacaattct gcggtcttga cgcgctcgag ctggatcact ggccggctcg ctaagaacag
    29521 ctgatcagcg gccgtggcct ctccaccgct tgatcgtacg ctggatgatg ccttcttcgc
    29581 cgcccgtttc gcgccacagg gcggcgaagc tcggatcgga cgaagccggg cgcttctcag
    29641 gctcgaggtc gtcgaagcgg acccggatcg ggatcgacac gccttcgccg cagacgatgc
    29701 actcgcggtt gcggagcgcc gggatggcgt cgaggaagcc gcgggcgcct tcgggcatcg
    29761 ccgcccggac gcaggcctgg tcgcggtcgt tgttgaggcg catggagatg atcgtgccgc
    29821 actgcgacag cacaccttcg gcaaggtcgg acgggcgctg cgtgatcagg cccagcgaaa
    29881 cgccatactt acggccttcc ttggcgatcc gctccaggat cttgcggacg gcctgggcgc
    29941 cggacatttc atccttgggg acgtagcggt gcgcttcttc gcaaacgagg aggatcgggc
    30001 gctgcgcctc ggtccgcgac cagatcgcat agtcgaacac cattcgcgca agcaccgaga
    30061 ccacgaccga cgtgatgtcc gaagggacgc cggagacgtc gacaatcgaa atgggacggc
    30121 cgtttgcggg aagcctgaac agccgggaaa tgaacgccgg catcgaatcc gacacgagca
    30181 tgcctgagaa cataaacgtg tagcgcgggt cggccttgag ctcgtcgagt ttctgcttga
    30241 gccgctggta gggcagagtg tcgccggcgc gctccagctt gcccatctcg ttggtgagga
    30301 tcactccgag atcggtcagc aggtacggga tcggcgaatc caccgtcacc tttccgtact
    30361 ggctcatgtc cttgcccttg gtccgggcgg cgagcaggca cttggcaagg atgtcggcgt
    30421 cgcgctggcg gtcggcgccg tgggtcgtca gcagcacttc gcaatgctct tcgaagttca
    30481 tcagccagta gggcagctgc aagttgtcga cgttgaacag ctcgccgcag cccttgaacg
    30541 cagccgaata ttcgccgtgc ggatcgatca tcacgatgtg accctcgggc gaaagctccg
    30601 aaatgcggtg aaggatgagc gagacggagg tcgacttgcc ggtaccggtc gagccgagga
    30661 ccgcgaaatg cttcgaaagc atcgggtcga cgtagagcgc tccgcgaatg tcgtccgtcg
    30721 gatagaccgt gccgatctcg atatgcgggc tgtcgtcggc ggcgaacacg gctcgaaggt
    30781 catccgtggt gaccggcata accgcgcaac ccggaatcgg atagcgggtc acgccgcggc
    30841 ggaagtggct catcttgccc gaagcctcgc ggcttccttc gccgagaaaa tccacgtggg
    30901 cggcgatttc gccgctgtct tcagccgtca tcgtccggac gttggcgata agccaggcat
    30961 cgccgacgat catcttgacc tggcttccga cctgacctga catcgcgaca gagggatcgg
    31021 catgcctctg cagttgagcg agagtctcgc ctttcatacg gatccgtgaa cccgaaccgg
    31081 cgatctcgac gacctgcccc acagccggga gctcggtcgc ggcggctgcc cgcggctttg
    31141 gcgcagcctc ctcgtcgaaa ctgctgatct cgtcgatgag ctggtgcagg ttcggctgtt
    31201 cgtccatctt ctcgtcccga ctcccgtgaa ttcgtcggga tggcgctaca gcagagctgt
    31261 taaaatttac cttagatatt agatgcgccg ccggaacatc gccgcggccg accagccaag
    31321 cgcaagcgac aacaacaccg cgaaaagccc atagagcacg gagtgccggc gggcggcgag
    31381 ggcgacgaac cgctcgaagc cgctcttgcc gatttcgatg tcgcggctgg ccgctgcgag
    31441 gacccggcca tcgtcgacaa ggaatgtctc ggccgtgtac gtcccaaccg gaacctggct
    31501 cgggatcgcg atcgtcgccc ggtagagcac cccgccggtg atttcgacgc cgttcgggtg
    31561 ctccgtataa aggccttcgc gaaggcggag gtcgagcagg ccggactcga agcgcttggc
    31621 cttctccgga gctgcgctcg atcccggcga aagctgaagg ttgcgcaccc ccagctcgta
    31681 gatggccgcg gtgcgctggt cgacgagtgt cgggatcggt ctcgacgatg caaccgcata
    31741 gaaggacgga gcagagcgga atcggttcga tcccgcattc atccagatgc cggcaatgcg
    31801 ctgtttttca cggacgatga tcggttccgc cggacccttg accacgacga cgacgtcggg
    31861 gggatccgcg gggattcggc cgctgggata catgatggcc ccgaaaagga gcagctgcgc
    31921 gcctgcaaat gtgtagcgga tctcgatatt tcgggcggaa acgtccggca ccagagttgg
    31981 cttggacgct ccgaccaggg ccagcgaggc tgcagcgagg gcggtggcga ggcggcgctt
    32041 catagataag cgatcgagta gatttcatcc gggcgccagg cgaggcccag cgccatccga
    32101 agggccacga ggaggatcag gaccgccagc gcgagcctca gcaggtcggg cttcatccgc
    32161 gttgcaagca cggcaccgta ctgtgccccg aagacgctcc cgatcaggag cagcgccgcc
    32221 aggacgatat cgaccgaatg ggtagtcacc gagtggatga aggtggtggc gccgctgacc
    32281 gccagcatca tcgccagcga cgtgccgacc acgacccgcg ccggcattcc gagcaggtag
    32341 atcattgccg gcacgaggat gaatccgccg ccg
//
LOCUS       DATAKH010000170        10277 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32640,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000170 DATAKH010000000
VERSION     DATAKH010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 10277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10277
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32640"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1938)
                     /gene="mutS"
                     /locus_tag="VHN55_07035"
     CDS             complement(<1..1938)
                     /gene="mutS"
                     /locus_tag="VHN55_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010407126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX2803721.1"
                     /translation="MARADAPTPMMAQYRRLKDEAGDALLFYRMGDFFELFFDDAKVA
                     SACLDIALTKRGESEGEPIPMCGVPVHSAESYLARLIRAGHRVAIAEQTESPAEARKA
                     RGSKALVERAIVRLVTPGTLTEETLLESGAANWLAAIGRAGEDWAIAAADISTGRFEL
                     IACGPGELASELARLSPAETVADGAVPGIGTRDGKGGFDSIAGERALKRRFGLATLDG
                     IGAPTRAELAAAGGLLAYLEATQKGAGVLLDVPRRIARSAYVQIDTATRESLELARSA
                     QGGIGGSLLGEIDRCVTAGGRRLLAGDISAPLTFRIEIARRLGLVAWFHDDQLRRERT
                     RSALKALPDVARALARLTAGRGGPRDLAQLRDGLSGADALKLALAGEADRAPMLDSLL
                     PELGGHEALVERLTAALVESPPLDSSKGGYIAEGHDPKLDELRAASSDGRRAIAGLES
                     RYRDSTGIPSLKIRHNAVLGYHVEVAARHADKLMAPDSGFTHRQTLAGVVRFNSPELH
                     EEAARVVEAGGHALALEAAHLDELTALAVAASPNILATAEALARIDVAAANAQRAAEG
                     GWCTPEVTDEPCLEIAAGRHPVVESALTGSGERFVANDLNLGRDDRLWLITGPNMGGK
                     STFLRQAALIVILAQAGCFVPA"
     gene            2014..4296
                     /locus_tag="VHN55_07040"
     CDS             2014..4296
                     /locus_tag="VHN55_07040"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEX2803722.1"
                     /translation="MSESNIKFSESEALEFHSRGRPGKIEIIASKPMATQRDLSLAYS
                     PGVAVPVRAIADNPTCAYDFTAKGNLVAVISNGSAILGLGNLGALAAKPVMEGKAVLF
                     KRFADVDAIDLEVDTQDCDAFIDAVALLQPSFGGINLEDIAAPDCFVIEQALRERMNI
                     PVFHDDQHGTAIITAAGLINACLLTNRELKDVKVVVNGAGAAAIACTELVKAMGVKAG
                     SVIMCDRKGVIYKGRTDLDQWKSAHAADTEARTLDDALAGADVFLGLSAANVLTKDMV
                     KKMADQPIIFAMANPDPEIWPPDAMEARPDAIIATGRSDFPNQVNNVLGFPFIFRGAL
                     DVRATAINEEMKIAAAKALAELAREPVPEEVAAAYGGTSHSFGRDYIIPAPFDPRLME
                     VVASAVAEAAIKSGVAQKDIEDFDSYRQELRARLNPTVSVLSLAYEAAKSKPKRVLFA
                     EGEEPNVLRAAIAFREAGYGTPVLVGREDVYERLREMGVDDADSYEVLNSRNSPLVGR
                     AVDHIYVKHQRHGLLRREVERMVNQDRNYFAAAMLALGEADAMITGTTRPFSQSLRQV
                     RQVIDDEKDAVPFGINIVVARNRTILIADTAVTERPNAHELAAIAMRAAGFARRMGLE
                     PRIAFISYTTFGNPPGTHIDELRGAVKLLDGITTDFEYEGEMGPDVALSHEMQRRFYP
                     FSRLSGPANILVMPGLQSANLSSKLLKNLGGESVLGPFLVGLELPVQIAPMTASASDL
                     VTLAVLAAGSARERLATLPL"
     gene            complement(4293..6380)
                     /locus_tag="VHN55_07045"
     CDS             complement(4293..6380)
                     /locus_tag="VHN55_07045"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEX2803723.1"
                     /translation="MLRQYELVERVRSYDPDADEALINRAYVFSMKAHGSQKRASGDP
                     YFSHPIEVAGILTDLKLDDQTIVTAILHDTIEDTLATTEEVEKLFGKDIARLVDGVTK
                     LSKIEAQSENERAAENLRKFLLALSDDIRVLLVKLADRLHNMRTLHHVPAEEKRRRIA
                     RETMDIYAPLAERIGMYEMMTEMQTLAFRELEPDAFASITRRLKQLHDQGGDLVSRIG
                     LGLQLHLADNGLEAEVTGREKHPYSIWRKMAERHISFEQLSDVMAFRVIVDTLDDCYR
                     ALGLIHQRWPMVPGRYKDYISTPKRNGYRSLHTSVIHDSQMRIEIQIRTKEMHEQAER
                     GLAAHWAYKEGKPKAELKIPWVDELVEILEHAASPEELLEHTRMAMYQDRIFAFTPKG
                     ELIQLPKGATPVDFAYAVHTDLGDRTVGAKVNGRVVPLRTILDNGDQVEILASEAQHP
                     QPSWLRFVATGKARAGVRRFVRHKERDETIELGRKIYEEIVERLPAELGDDALKRALK
                     KLAMEDSDALMIAIARKRVSDEEVMEALMPGSAGADVAPRPPVQRTAISIRGLTPGVA
                     YHLAQCCHPIPGDRIVGLRREDEEIEVHVIGCDTLASGVDADWLDLAWGEGTGGAARL
                     AVILRDVPGALGTMAGILGSKHANIINLHLVHRDGSFQTFHLDIEVHDLAHLHAIIAA
                     LRDADPVSSVERI"
     gene            complement(6468..6800)
                     /locus_tag="VHN55_07050"
     CDS             complement(6468..6800)
                     /locus_tag="VHN55_07050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803724.1"
                     /translation="MRIAMLRPVLAFSALSLPAAPAAAATYSAKPAIAAPATIAAKDI
                     VWTCSTSACVGQTKNSRPLVLCQALAKQAGRIDSFLVDGREIPGADLERCNAFAKTDA
                     GKAVANAR"
     gene            6931..7398
                     /locus_tag="VHN55_07055"
     CDS             6931..7398
                     /locus_tag="VHN55_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX2803725.1"
                     /translation="MDAFREAALSCPIPAAVELLGEKWAFLILRGAFNGLEHFEEFQA
                     GLGIARNILSDRLAKLVGGGILERSPDPSDRRKVIYSLTDKGEALLPVVIAIRQWGED
                     WGYGEMAIMLADSKDRRPIRRIRVLADDGREVTLGDLTWISRDEVESKAEKAA"
     gene            complement(7441..7782)
                     /gene="rpoZ"
                     /locus_tag="VHN55_07060"
     CDS             complement(7441..7782)
                     /gene="rpoZ"
                     /locus_tag="VHN55_07060"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEX2803726.1"
                     /translation="MARVTVEDCVDKVPNRFDLVLFAAQRARQISGGADLTIDRDRDK
                     NAVVSLREIAESTVKPKDLQEAIVTNLQKVRVDEEDETDELASLSESAEALRLTAAAP
                     PRPTPSGGEYD"
     gene            7882..9045
                     /locus_tag="VHN55_07065"
     CDS             7882..9045
                     /locus_tag="VHN55_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine/phosphatidylglycerophosphate/
                     cardiolipin synthase family protein"
                     /protein_id="HEX2803727.1"
                     /translation="MPDQPNPSANGAISADIAGNRVELIESGSLRLRTLLELIGGAEQ
                     SLRILMYMFDPDRVGKAVRDALIAAARRGVEVKLLIDGFGSAATPGFFTELRDSGGDY
                     CVFNAHYGRRYLLRNHQKLVVVDDRIAIVGGANIDEDYMVDTGPAHWRDLWLLVEGPE
                     AAVAGRYFDAVFRWSKREKATLRSLRRLVGEHCEWRGPLQWKFGGPLSLRNSWWRSIG
                     KDIRRGSRLDMIFAYFAPPGAMLRRIGRLGRRGRARIVTAAKSDNNTTIAAARHSYSR
                     LLRRHVEVYEYRPAKLHTKLVIVDDVVHVGSSNFDYRSLYLNLEVMLRIHDRAFAESV
                     RGYFERELKDCKWITPEVHKNRANPWRRFKWALSHFLVNVMDYTVTRRLNLRA"
     gene            complement(9042..9683)
                     /locus_tag="VHN55_07070"
     CDS             complement(9042..9683)
                     /locus_tag="VHN55_07070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013832238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2803728.1"
                     /translation="MPTSNARILKGPRRVVRRAARRSASPHWQFLRGFLKHPVMVGSV
                     IPSSRVLIERMLKPVDWKATKLFVEYGPGVGTFTRPLLEKMGEDSTLIAIDTNPDFIK
                     YLRKSINDPRLVAVTGSAADVQSIVEEHGFEHADYVLSGLPFSTLPPGVGEAIATATA
                     KVIRPGGAFLVYQFSPKVLSFLKPHFERIERGFEWINVPPATLFWAYRDEADA"
     gene            complement(9773..>10277)
                     /locus_tag="VHN55_07075"
     CDS             complement(9773..>10277)
                     /locus_tag="VHN55_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX2803729.1"
                     /translation="LNNVVLIGATNRPSLIDPALLRPGRFDELIYVAPPETAGRRRIL
                     AIHTSGMPLADDVDLESLAQRTERFTGADLEDLVRRAGLTALRRGLDAAKVTKEDFES
                     ALSETRASVTPQMLEEYERIQETLKSDAVRPTGIGFVLPGMLRPRGKEGEPAPPAASV
                     QPRPDFE"
BASE COUNT         1719 a         3400 c         3344 g         1814 t
ORIGIN      
        1 cgccgggacg aagcacccgg cctgcgccag gatgacgatc agcgcggcct gcctgaggaa
       61 agtcgacttg ccgcccatgt ttggaccggt gatcagccat agccggtcgt cgcggccgag
      121 gttgaggtcg ttggcgacga agcgctcgcc gctgccggtg agcgcgcttt ccaccaccgg
      181 gtgccggccg gccgcgattt cgaggcacgg ctcgtcggtc acctccggcg tgcaccaccc
      241 gccttccgcc gcccgctgcg cattcgcggc ggcgacgtcg atcctggcca gcgcctcggc
      301 ggtcgcgaga atgttcggcg atgccgcgac ggcaagcgcg gtcagctcgt cgagatgcgc
      361 cgcttcgagc gcgagcgcgt gcccgccggc ttcgacaacc cgtgctgcct cctcgtgcag
      421 ctccggcgag ttgaatcgga ccactccggc aagtgtctgc cggtgcgtaa agccgctgtc
      481 gggcgccatc agcttgtcgg cgtgccgggc tgcaacctcg acatgatagc cgaggaccgc
      541 gttgtggcgg atcttgagcg acggaattcc cgtcgaatcc cggtaccggc tttcaagtcc
      601 ggcaatcgcc cggcgcccgt ccgacgacgc ggcgcgaagc tcgtcgagtt tcggatcgtg
      661 cccctctgcg atgtagccgc ctttcgagga atcgagcggc ggcgattcga ccagcgccgc
      721 ggtcagccgt tcaaccagcg cttcgtggcc gccgagctcg ggcagaagcg agtcgagcat
      781 gggtgcccgg tccgcttccc ccgcgagcgc aagcttcagc gcatcggcac ccgaaagccc
      841 gtcgcggagc tgcgcgagat ctcgcgggcc gccgcgcccc gccgtcagcc gtgccagagc
      901 gcgggcgaca tcgggaagcg ccttgagcgc cgagcgtgtc cgctcgcggc gcagctggtc
      961 gtcgtgaaac caggcgacga gcccaagccg ccgggcgatt tcaattctga acgtgagcgg
     1021 cgccgaaatg tcgccggcca ggagccgccg cccgcctgcg gtcacgcagc ggtcgatttc
     1081 tcccagcagg cttccgccga ttccgccctg cgcggaccgg gccagctcca ggctttcccg
     1141 ggtcgcggtg tcgatctgta cataagcaga gcgggcgatc cgacgcggca catcgagcag
     1201 gaccccggcg cctttctggg tcgcttcgag ataggcgagc aggccgccgg ccgctgccag
     1261 ctccgcgcgc gtgggggcgc cgatgccatc gagcgtcgcg agtccgaaac gccttttgag
     1321 cgcccgctcc ccggcgatgc tgtcgaagcc gcccttcccg tcgcgcgttc ctatccccgg
     1381 taccgctccg tcggcgacgg tctcggccgg cgacagccgc gccagctcgg atgcgagctc
     1441 gccgggtccg caggcgatca gctcgaaccg gcccgtggaa atgtccgccg cggcgattgc
     1501 ccagtcttcg ccggcgcgcc cgatcgccgc cagccaattg gccgcacccg actcgagcaa
     1561 cgtctcctcg gtcagcgttc ccggagtgac cagccggacg atcgcccgct cgacaagtgc
     1621 cttgctgccg cgcgccttgc gggcctcggc cgggctttcg gtctgctcgg cgatggcgac
     1681 ccgatggcct gcgcggatca gccgggccag ataggattcg gccgagtgca cgggcactcc
     1741 gcacatcgga atcggctcgc cttcgctctc gccccgcttg gtcagcgcga tgtcgaggca
     1801 cgccgacgcc accttcgcat cgtcgaagaa caattcgaag aagtcgccca tccggtagaa
     1861 cagcagggcg tcgcccgcct cgtccttgag gcgccggtat tgcgccatca tcggcgtcgg
     1921 ggcatcggct ctagccatta tcagcttggt agcggctcgg cgtgactctt cccacaccct
     1981 ttggctaaag cgcccgccaa ggagccgcgt tcaatgagcg aaagcaatat caaattctcg
     2041 gagagcgaag cgctcgagtt ccactcgcgc ggacgtccgg gaaagatcga gatcatcgcc
     2101 tccaagccga tggcgaccca gcgcgacctc agcctcgctt attcgccggg agtcgcggtc
     2161 ccggtccgtg caatcgccga caatcccacc tgcgcctacg atttcaccgc caagggcaac
     2221 ctcgtcgcgg tcatctccaa cggcagcgcg atcctcggcc tcggcaacct cggcgcactc
     2281 gcggccaagc cggtgatgga aggcaaggcg gtgctgttca agcgcttcgc cgacgtcgac
     2341 gcgattgacc ttgaggtgga cacgcaggat tgcgacgcct tcatcgacgc cgttgcgctg
     2401 ctccagccga gcttcggcgg gatcaacctc gaggacatcg ccgcccccga ctgcttcgtt
     2461 atcgagcagg cccttcgcga gcgaatgaac atcccggtct tccacgacga ccagcacgga
     2521 accgccatca tcaccgccgc cgggctgatc aacgcctgcc tgctgaccaa ccgcgagctc
     2581 aaggacgtga aggtggtcgt gaacggcgcc ggggcagcgg cgatcgcctg caccgagctg
     2641 gtcaaggcga tgggagtcaa ggccggcagc gtcatcatgt gcgaccgcaa gggcgtcatc
     2701 tacaagggcc gaaccgacct cgaccagtgg aaatccgcgc acgcggctga caccgaggcc
     2761 cgcacactgg acgacgcgct cgccggggcc gacgtgttcc tcggcctttc cgctgccaat
     2821 gttctgacca aggacatggt aaagaagatg gccgaccagc cgatcatctt cgcaatggcc
     2881 aatcccgacc ccgagatctg gccccccgac gcgatggagg ctcggcccga cgccatcatc
     2941 gccaccggcc gctccgactt ccccaaccaa gtcaacaacg tgctcggctt cccgttcatt
     3001 ttccgggggg cgctcgacgt tcgcgcaact gcgatcaacg aggagatgaa gatcgccgca
     3061 gccaaggccc tggccgagct tgcccgggag ccggtgcccg aggaagtcgc cgccgcctac
     3121 ggcggaacga gccacagctt cgggcgcgat tacatcatcc cggcgccctt cgacccgcgg
     3181 ctgatggagg ttgtcgcgtc cgcggtcgcc gaagcggcga tcaagagcgg cgtcgcccag
     3241 aaggacatcg aggatttcga ttcctaccgg caggagcttc gggcgcgcct taacccgacg
     3301 gtttccgtcc tcagccttgc ctatgaggcc gccaagtcga agcccaaaag ggtgctgttc
     3361 gccgagggcg aggagccgaa tgtgcttcgc gctgcaatcg ccttccgaga ggccggctac
     3421 ggcacccccg tcctcgtcgg ccgcgaggac gtttacgagc gccttcgtga gatgggcgtg
     3481 gacgatgccg acagctacga ggttctcaac agccgcaatt cgccgctggt cggccgcgcc
     3541 gtcgatcaca tctacgtgaa gcaccagcgc cacggccttc tccgccgcga ggtcgagcgg
     3601 atggtcaacc aggaccgcaa ctatttcgct gcggcgatgc tcgcgctcgg cgaggccgac
     3661 gcgatgatca ccgggacgac ccggccgttc agccagtcgc ttcgccaggt ccgccaggtc
     3721 atcgacgacg aaaaggacgc cgttccgttc ggaatcaaca tcgtcgttgc gcggaaccgg
     3781 accatcctga tcgccgacac ggcggtcacc gagcgtccga atgcacatga gctcgccgcg
     3841 atcgctatgc gcgccgccgg ctttgcgcgg cgaatggggc tcgagccgag gatcgctttc
     3901 atcagctaca ccaccttcgg caacccgccg ggcacccaca tcgacgagct tcgcggagcg
     3961 gtgaaactgc tcgacgggat caccaccgat ttcgaatatg aaggcgagat ggggcccgac
     4021 gtcgcgctca gtcatgagat gcagcggcgc ttctatccgt tcagccggtt gagtggtccg
     4081 gccaacatcc tcgtcatgcc gggcctgcag tcggcgaacc tgtcgtcgaa gctgctcaag
     4141 aacctcggcg gtgagagcgt gcttgggccg ttcctcgtcg gcctcgagct gccggtccag
     4201 atcgcgccga tgacggcaag cgcctccgac ctcgtcaccc tcgccgtcct cgccgcggga
     4261 agcgctcgtg agcggctcgc gacgcttccg ctctaaatcc gctcgaccga gctgaccggg
     4321 tcggcgtctc tcaacgcggc gatgatcgcg tgcaggtgcg caaggtcgtg aacctcgatg
     4381 tccaggtgga atgtctggaa acttccgtcg cggtggacga ggtggaggtt gatgatgttc
     4441 gcgtgcttgg agcccaggat gcccgccatc gtcccgagcg ctccgggaac gtcgcgaagg
     4501 atcaccgcca ggcgcgccgc tccgcccgtt ccttcgcccc aggcgaggtc gagccagtcc
     4561 gcatcgactc cgctcgcaag cgtgtcgcag ccgatgacgt gaacttcgat ctcctcgtcc
     4621 tcacggcgaa gtcccacgat ccggtcgccg gggatcgggt ggcagcactg ggccaggtga
     4681 taagcgacac cgggggtgag tcccctgatc gaaatcgcgg tccgctgcac cggcgggcga
     4741 ggggcaacgt cggccccggc cgagcccggc atcaatgctt ccatcacttc ttcgtccgaa
     4801 actcgcttgc gggcgatagc gatcatcagc gcgtccgagt cctccatcgc cagctttttg
     4861 agcgcccgct tgagcgcatc gtcgcccagc tcggcgggaa ggcgttcgac gatttcttcg
     4921 tagattttgc ggccgagctc gatcgtctcg tcccgctcct tgtggcggac gaagcgacgg
     4981 actcccgccc gagccttgcc ggtagcgacg aagcgcagcc atgacggttg cgggtgctgc
     5041 gcctccgaag cgaggatttc gacctggtcg ccgttgtcga ggatggtgcg aagcgggacc
     5101 acccgcccgt tcaccttggc tccgacggtg cggtcgccga ggtcggtgtg gaccgcatag
     5161 gcgaagtcga cgggggtagc gcctttcggg agctggatca gctcgccctt gggagtgaag
     5221 gcgaagatcc ggtcctggta catcgccatt ctcgtatgct cgagcagctc ttccgggctc
     5281 gccgcatgct caaggatctc gaccagctca tcgacccagg ggatttttag ctccgccttg
     5341 ggcttgcctt ccttgtaggc ccagtgggcg gcgaggccgc gctcggcctg ctcgtgcatt
     5401 tccttcgtcc ggatctggat ttcgatccgc atctgcgaat cgtgaatcac ggaggtgtga
     5461 aggcttcggt agccgttgcg cttgggggtc gagatgtaat ccttgtagcg gcccgggacc
     5521 atcggccagc gctggtggat cagaccgagc gcacggtagc aatcgtccag tgtgtcgacg
     5581 atcacccgga acgccatcac gtcggaaagc tgctcgaagc tgatgtggcg ttcggccatc
     5641 ttgcgccaaa tcgaataggg atgcttctcg cgtcccgtca cctcggcctc gaggccgttg
     5701 tcggcaaggt gaagctgcag gccgagcccg attcggctga ccaggtcgcc gccttggtcg
     5761 tggagctgct tcagccgcct ggtgatcgac gcaaaggcgt cgggctcgag ctcgcggaac
     5821 gcgagcgtct gcatctccgt catcatttcg tacataccga tccgctccgc gagcggcgcg
     5881 tagatgtcca tcgtctcgcg ggcgatccgg cggcgcttct cctccgcggg cacgtggtgc
     5941 agagtgcgca tgttgtggag ccggtccgca agcttgacca gcagcacccg gatgtcgtcg
     6001 gacagggcga ggaggaactt gcgaaggttc tccgccgccc gctcgttttc cgactgggcc
     6061 tcgattttcg aaagcttggt taccccgtcg accagccgcg cgatgtcctt gccgaacagc
     6121 ttttcgacct cttccgtggt cgcaagcgtg tcttcgatcg tgtcgtggag gatggcggtg
     6181 acgatggtct ggtcgtccag cttgaggtcc gtgagtatcc cggcaacctc gatcgggtgg
     6241 ctgaaataag ggtcgcccga cgcacgcttt tgcgacccat gcgccttcat cgagaagaca
     6301 taagcgcggt tgatcagggc ctcgtccgca tccggatcgt aggaccgtac cctttcgaca
     6361 agctcgtact gcctcagcac ccggctaaga tggggcggag cggcctcttt gtgcaagtgc
     6421 gaaagccgcg ccgcaagcaa aggctcgggc gcggccggag ccaatcctta ccgtgcgttg
     6481 gcgacggcct taccggcatc cgtcttcgca aaggcgttgc agcgctcgag atcggcgccc
     6541 ggaatctcgc ggccgtcgac taggaacgag tcgatccggc ccgcctgttt ggccagcgcc
     6601 tggcagagga cgagcggccg gctattcttg gtctggccga cgcaggcact cgtgctgcag
     6661 gtccacacga tgtctttggc agcgatcgtc gcgggagcgg caatcgcggg ctttgcagaa
     6721 taggtcgccg cagcggccgg ggcagcggga agcgagagag cggaaaaggc aagaacgggg
     6781 cgaagcatcg cgatcctcat ttctagtttc gattcaaaac gattattctt gtgcgtttca
     6841 tttcgcaact gttcttttcc ggccgtttgt gcttttctgc cgccgcgaag gagaaccggc
     6901 gtggccgcag acggaaagtc gagtgcggat atcgatgcgt ttcgcgaagc tgccttaagc
     6961 tgcccgatac ccgccgcagt cgaactgctc ggcgagaagt gggcgttcct gatccttcgc
     7021 ggcgccttca atgggctcga gcatttcgag gagttccagg ccggcctcgg aattgcccgc
     7081 aacatccttt ccgaccggct ggccaagctg gtcggcggcg gcatactcga aaggtcgccc
     7141 gatccctcgg accggcgcaa ggtgatctac tcactgacag acaagggcga ggcgctgctt
     7201 ccggtggtca tcgcaatccg ccagtggggc gaggactggg gctatggcga gatggccatc
     7261 atgctcgccg acagcaagga ccgccgcccg atccggcgaa tccgggttct ggccgacgac
     7321 gggcgcgaag ttaccctggg cgacctgacc tggatcagcc gcgacgaggt ggaatcgaaa
     7381 gccgaaaagg cggcttgagc atcgtgctcg ctcgtccccc ggacgagctg cgcgcgctac
     7441 ttaatcgtat tcgccgccgc tcggggtcgg gcgcggcgga gcggctgcag tcagccgcag
     7501 cgcttcggcc gattcgctca gcgatgccag ctcgtcggtc tcgtcctctt cgtcgacccg
     7561 gaccttttgc aggttggtga cgatcgcttc ctggagatcc ttgggcttca ccgtcgattc
     7621 ggcgatttcg cgcaatgaga ccacggcatt cttgtcgcgg tcgcggtcga tggtcagatc
     7681 ggcgccgccc gaaatctggc gcgcgcgctg ggcggcgaac aggacgaggt cgaacctgtt
     7741 cggaaccttg tctacgcaat cttcaactgt aacgcgcgcc attcatcgct ccgtggatta
     7801 tccgactgcc gtggatatgg gatgtcggga gggccgcgcc aatagcttgc ggacaggcga
     7861 aaagtcaagg aaaccggctt cgtgcccgat cagcccaacc cgtccgccaa tggcgcgatc
     7921 agcgccgaca tcgccggcaa tcgagtcgag ctgatcgaat ccggctcgct tcgcctgcgg
     7981 accctgctgg agctgatcgg cggggccgag caaagccttc gaatcctgat gtacatgttc
     8041 gaccccgacc gcgtcggaaa ggcggtacgc gacgcgctga tcgccgcggc caggcgcggg
     8101 gtcgaggtca agctgctgat cgacgggttc ggctccgcgg ccacccccgg cttcttcacc
     8161 gagctacggg acagcggcgg cgattattgc gtgttcaacg cgcattacgg ccgccgctac
     8221 ctgctgcgaa accatcaaaa gctggtcgtg gtcgacgata ggatcgccat cgtcggcggc
     8281 gccaatatcg acgaagacta tatggtcgac accggcccgg cgcactggcg tgacctctgg
     8341 ctcctggtcg aggggcctga agcggcggtc gccggccgct atttcgacgc ggttttccgc
     8401 tggtcgaagc gggagaaggc gacgttgcgt tcgcttcgca ggctggtcgg tgagcattgc
     8461 gagtggagag gcccgctgca gtggaagttc ggcggtccgc tgagccttcg caacagctgg
     8521 tggcgaagca tcggcaagga catcaggcgc ggctcgcggc tcgacatgat cttcgcctat
     8581 ttcgcgcccc cgggcgcgat gcttcgccgc atcgggcggc tcggaaggcg gggccgggcg
     8641 cggatcgtca ctgccgcaaa gtcggacaac aatacgacga tcgcggcagc gcgtcacagc
     8701 tacagccgcc tccttcgccg ccatgtcgag gtgtacgaat atcggccggc caagctccac
     8761 accaagctcg tcatcgtcga cgacgtggtc cacgtcggct catccaattt cgattatcga
     8821 agcctgtacc tcaacctgga agtgatgctt cgaattcacg atcgcgcatt cgccgagtcg
     8881 gtgcgcggct atttcgagcg cgagctcaag gactgcaagt ggatcactcc cgaggtgcac
     8941 aagaaccgcg ccaacccgtg gcgccgcttc aagtgggcgc tctcgcactt ccttgtgaac
     9001 gttatggatt acaccgtgac ccggcggctc aacctgcggg cttaagcgtc cgcttcatcg
     9061 cgataggccc agaacagggt cgcgggcgga acgttgatcc attcgaagcc acgctcgatg
     9121 cgctcgaagt gcggcttgag gaacgacagc accttggggc tgaactggta gaccaggaag
     9181 gcgccgcccg gccgaatcac ctttgcggtc gccgtcgcga tcgcttcgcc gacgccagga
     9241 ggaagggtcg agaagggcaa gccggagagc acatagtccg cgtgctcgaa cccgtgctcc
     9301 tcgacgattg actggacgtc ggccgccgag cccgtcaccg cgaccagccg cgggtcgttg
     9361 atcgacttgc ggagatattt gatgaaatcg ggattggtgt cgatcgcgat gagggtcgaa
     9421 tcctcgccca tcttctcgag cagcggccgg gtgaaggtgc ctactccggg accatattcg
     9481 acgaacagct tcgtcgcctt ccagtcgacc ggcttcagca tccgctcgat caggacccgg
     9541 ctcgagggga tcaccgagcc gaccatcacc gggtgcttca ggaagccgcg aagaaactgc
     9601 cagtgcgggc tcgcagagcg ccgggccgcc cgccgcacga cgcggcgcgg ccccttgagg
     9661 attcgagcat tggaagtggg catgtaatct ccgcgggcaa gttggctgcg ttggcaaaag
     9721 ccacgcttgt tggcaagcgt ccctagtcgg gccgatagag ctgtgcgacg gcttactcga
     9781 agtccggccg cggctggacc gaggcggcgg gcggcgccgg ctccccttcc ttgccgcgcg
     9841 ggcgaagcat gcccggaagc acgaagccga ttccggtcgg ccggacggcg tcgctcttca
     9901 gtgtctcctg gattcgctca tattcttcga gcatctgcgg agtgacggag gcgcgcgtct
     9961 cggacagcgc cgattcgaaa tcctccttcg tcaccttggc agcgtcgagg ccgcggcgaa
    10021 gcgcggtaag ccccgccctc cggaccaggt cctcgaggtc ggcgccggtg aaccgctccg
    10081 tccgctgtgc gagcgattcg agatcgacat cgtcggccag cggcatgccc gacgtgtgga
    10141 tcgccaggat ccgcctgcgt ccggcggtct ctggcggcgc gacatagatc agctcgtcaa
    10201 accggccggg ccggagcaag gcgggatcga tcaggcttgg ccggttcgtg gcgccgatca
    10261 gaacgacgtt gttcagc
//
LOCUS       DATAKH010000171         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_25801,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000171 DATAKH010000000
VERSION     DATAKH010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25801"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(175..588)
                     /gene="mce"
                     /locus_tag="VHN55_07080"
     CDS             complement(175..588)
                     /gene="mce"
                     /locus_tag="VHN55_07080"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEX2803730.1"
                     /translation="MELGRLNHVGVATPSIEKSLELYRTMFGAEPHGEPFDLPAQGVR
                     VCFVDTPNSQIELIEPLGEESPIAKFLEKNPAGGQHHVCFEVADIGEARSWFEGKGAR
                     ILGPTRTGAHGTPVFFLHPKDMGGVLTELMESPRG"
     gene            complement(593..832)
                     /locus_tag="VHN55_07085"
     CDS             complement(593..832)
                     /locus_tag="VHN55_07085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803731.1"
                     /translation="MTFDGEPIFVGLVCLVLAVLVALRMVRGLSTGRLPVYRTHLERG
                     EGEAKFFALFAVQGILFLLMAFIAADLLLGLGFRD"
     gene            complement(829..1287)
                     /locus_tag="VHN55_07090"
     CDS             complement(829..1287)
                     /locus_tag="VHN55_07090"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX2803732.1"
                     /translation="MSTYTATICWTRDPETDFARGQYSRAHRWEFDGGISLVASASPH
                     IVPAPWSNADAVDPEEAFVASLASCHMLFFVDFARRAGLVVDSYVDEAEGLLEKRDDG
                     KMWMSRVTLRPKVDWGADKPDEATLADLHHKAHEACFIANSVTTAVTVEQ"
     gene            complement(1295..>1507)
                     /locus_tag="VHN55_07095"
     CDS             complement(1295..>1507)
                     /locus_tag="VHN55_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006965143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX2803733.1"
                     /translation="IFRGKTPEEIAEHTREYEERFANPFVAASKGFIDEVIMPHSTRR
                     RVALGLRKLRDKQLENPWKKHDNIPL"
BASE COUNT          268 a          502 c          475 g          262 t
ORIGIN      
        1 gaccccacgc gacagtcgta ttcggcactc ctcaccaacg aggagcaaga gcgatgacca
       61 acaacacaaa cgagaacgac cgctgcaagt ccagctgcac ctgcaccaac tgcaggtgcg
      121 gcgcggactg ccgctgcggc aagtaagcaa cggcggcggg gctcggcccc gccgctagcc
      181 cctcgggctc tccatgagct ccgtcagaac cccgcccatg tctttcggat ggaggaagaa
      241 gaccggcgtc ccgtgggcgc cggttcgcgt aggccccagt atccgcgcgc cctttccttc
      301 gaaccatgaa cgcgcttcac cgatgtccgc gacctcgaag cagacatggt gctggccgcc
      361 cgccggattc ttctcgagga acttcgcgat cggcgattcc tcgcccagcg gctcgatcag
      421 ctcgatctgc gaattgggcg tgtcgacgaa gcacacccgc acgccctgcg cgggtaggtc
      481 gaacggttcg ccgtgcggct cggcgccgaa catcgtccgg tagagctcca ggctcttttc
      541 gatcgacggg gtcgccaccc cgacatggtt cagacgtcca agttccatcc gttcaatccc
      601 tgaagccgag gccgaggagc aggtccgcgg cgatgaatgc catgagcagg aacaggattc
      661 cctgcaccgc gaacagtgcg aagaacttgg cttcgccctc gccccgttcg agatgggtgc
      721 ggtagaccgg cagccgcccg gtgctaagcc cgcggaccat cctgagcgcg accagcacgg
      781 cgaggaccag gcagacaagc ccgacgaaaa taggctcgcc gtcgaacgtc actgctcgac
      841 cgtcaccgca gtcgtgacgc tgttggcgat gaagcaggcc tcgtgcgctt tgtggtgaag
      901 gtcggcgagc gtggcctcgt ccggcttgtc ggcgccccag tcgaccttcg ggcgaagggt
      961 cactcggctc atccacatct tgccgtcgtc gcgcttctcg agaaggcctt cggcttcgtc
     1021 gacataacta tcgaccacca gccccgcccg ccgcgcgaag tcgacgaaga acagcatgtg
     1081 acaggaagcc agtgaagcga cgaacgcctc ttccggatcg accgcgtcgg cgttggacca
     1141 gggcgcgggg acgatgtgcg ggctggcgct ggcgacgagg ctgatgcccc cgtcgaactc
     1201 ccagcggtgg gcacggctgt actggcccct cgcgaagtcg gtttccggat cgcgggtcca
     1261 gcagatcgtc gcggtgtagg tgctcatgtg cgcctcacag tgggatgttg tcgtgcttct
     1321 tccacggatt ctccagctgc ttgtcgcgca gctttcttag ccccagcgcc acccgccgac
     1381 gcgtcgaatg gggcatgatg acctcgtcga tgaagccctt gctcgcggcg acgaacgggt
     1441 tggcgaagcg ctcttcatat tcgcgggtat gctcggcgat ttcctcggga gtcttgccgc
     1501 ggaagat
//
LOCUS       DATAKH010000172         2921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_22342,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000172 DATAKH010000000
VERSION     DATAKH010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22342"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1081)
                     /locus_tag="VHN55_07100"
     CDS             complement(<1..1081)
                     /locus_tag="VHN55_07100"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX2803734.1"
                     /translation="MRPTANQAEKPQIEKRANVRLAAVSTAARHDIDYSLLDARLQRL
                     MDRPTMVGLAVGVVENGRITFLKGYGETLAGSGEPVTPETVFRWASVSKGVAATMVAK
                     LAEQGQVELDAPVARYSATLKLPDSAEQRATVADLLSHRLGIYHNAYDDRLEAGQDPR
                     QIRRDLGGLTLLCQPGTCWNYENVAYDAASEIVQRVTGTPYQQAILRHLFDPLGMTSA
                     SVTREGLMQAKSWARPHNAGRREVELTDSYYRVPAAGGVNSNIKDMTLWMLAQMGEMP
                     DVVSPNVLQAIHAPLVKTPGERSRLRKFLERIGTAWYGFGWRSYDYAGHRIVGHRGGV
                     NGYRSLILFDPLGMTSASVTREGLMQ"
     gene            1317..1586
                     /locus_tag="VHN55_07105"
     CDS             1317..1586
                     /locus_tag="VHN55_07105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803735.1"
                     /translation="MRFLKTLFWIVVASLVTLFAARNWRDVTIELWSDLEADVKLPLL
                     LVVVFLLGFVPPWLTFRAKLWRLTNRVAAAPREIPVIEPDPEGQE"
     gene            1583..2254
                     /gene="pyrF"
                     /locus_tag="VHN55_07110"
     CDS             1583..2254
                     /gene="pyrF"
                     /locus_tag="VHN55_07110"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEX2803736.1"
                     /translation="MKPIFVAIDTPDLERAVRVATVLKGSAGGVKLGLEFFCANGPSG
                     IRQLAAIGLPVFLDLKLHDIPNTVAKAVAALRPLEPAVLTVHAGGGRAMMEEAKAAAP
                     DKTKVVAVTVLTSLDSGDLRSTGVEGEPADQVERLAALARESGLDGIVCSGAEVGAAK
                     KAWPGGFFVVPGVRPQGSGAADQKRVVTPRAALDRGASILVIGRPITGADDPEAALKA
                     IAATL"
     gene            2311..>2921
                     /locus_tag="VHN55_07115"
     CDS             2311..>2921
                     /locus_tag="VHN55_07115"
                     /EC_number="2.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEX2803737.1"
                     /translation="MSWLSRVRSGIPFLPKRQSTDTLWHKCAKCGTMVFLKEWEDNQR
                     VCPRCDFHDRIGPRHRFRYLFDDDKYELLPAPEVKEDPLKFRDTKRYTDRLKDARSKT
                     GERDALINARGRIGGHRAVVGVQDFAFMGGSMGVAVGTAFINGIRAAIEDKSPYVIFT
                     ASGGARMQEAVLSLMQLPRTTVAIRELKEAGLPYIVVLTDPTTG"
BASE COUNT          521 a          944 c          930 g          526 t
ORIGIN      
        1 cctgcatcag gccttcgcga gtgacgcttg cgctcgtcat tcccaacggg tcgaacagga
       61 tcagcgagcg atagccgttc actccgccac ggtgcccgac gatccgatgc cccgcatagt
      121 catagcttcg ccagccgaag ccgtaccagg cggttccaat cctctcgagg aacttgcgaa
      181 gccggctgcg ttcgccggga gtcttcacca gcggagcatg gattgcctgc agcacgttcg
      241 gcgacacgac atcgggcatt tcgcccatct gtgcgagcat ccacaaggtc atgtccttga
      301 tgttgctgtt cactccgccg gccgccggta cgcggtaata ggagtccgtc agctcgacct
      361 cgcggcgccc ggcgttgtgc gggcgggccc agcttttcgc ctgcatcagg ccttcgcgag
      421 tgacgcttgc gctcgtcatt cccaacgggt cgaacaaatg ccgaaggatc gcctgctggt
      481 acggtgttcc agtgacgcgc tgaacgatct ccgaggcggc atcgtaggcg acgttttcat
      541 agttccagca ggtgcccggc tggcagagta atgtcagccc gccgagatcc ctgcggatct
      601 gccgcggatc ctgtcccgcc tcaagacggt cgtcataggc gttgtggtag atgccgagcc
      661 ggtggctgag caggtcggcg acggtggcac gctgttcggc gctgtcggga agtttcaagg
      721 tagcgctgta gcgggctacc ggagcatcga gctcgacctg gccctgttcg gcaagcttcg
      781 cgaccatcgt cgcggcgacg cccttcgaaa cggacgccca gcgaaacact gtttccggag
      841 tcaccggttc gccagatccg gcaagggttt cgccatagcc cttgaggaat gtgattcggc
      901 cgttttcgac cactccgacc gcaagcccca ccatggtcgg gcggtccatg agccgctgca
      961 gccgagcgtc gaggagcgaa tagtcgatat cgtgccgggc ggccgtcgaa accgcagcaa
     1021 gacgcacatt ggcgcgcttt tcgatttgcg gcttttcagc ctggtttgcc gtcggccgca
     1081 ttgcaatcaa agccgttccc aggagcagcg cggcggcacc aagcccgact ttcgatgatg
     1141 ttttcaaaaa tcccactccc gcaccccggg ccgctgttgc cggacaggat tcagcgctca
     1201 acacgacaaa gcgatggctg cgacgaaccg aacgctccgc gggacgaatg ttgcccagcc
     1261 ggacgctggc catcgcggcg agcctcgcct aagcggcgtc agcgggagga cgtcgattgc
     1321 gcttcttgaa gaccctgttc tggatcgtcg tcgcgtcgct cgtgacttta ttcgcagcgc
     1381 gcaactggcg cgacgtgaca atcgaactct ggagcgacct cgaagccgac gtaaagctgc
     1441 ccttgcttct cgtggtcgtg ttcctcctcg ggttcgtccc tccctggcta acattccgag
     1501 ccaagctctg gcgtctgacc aatcgagtcg cggccgctcc tcgcgagatt ccggttatcg
     1561 agcccgatcc ggagggacag gaatgaagcc gatcttcgtc gccatcgaca cgccggacct
     1621 ggagcgtgcg gttcgggtcg ccacggtcct caaaggctcg gcaggcggag tgaagctcgg
     1681 cctcgaattc ttctgcgcca acggcccgtc cggcattcga cagctcgcgg caatcggact
     1741 ccccgtcttc ctcgacctca agctccacga cattccgaac accgtcgcca aggctgtcgc
     1801 ggcgctccga ccgctcgaac cagcggtgct taccgtccac gccgggggcg gacgggcgat
     1861 gatggaggaa gcaaaggccg ccgcgcccga caagacgaaa gtcgtggcgg tgacggtgct
     1921 cacaagcctc gattccggcg atctcaggtc gaccggcgtc gagggcgaac ccgccgatca
     1981 ggtcgaacgg cttgcggcgc tcgcccgcga atccgggctc gacgggattg tttgctcggg
     2041 agccgaagtc ggcgccgcca aaaaagcatg gccgggtggc ttcttcgtcg ttcccggggt
     2101 tcgcccgcag ggcagcggcg ctgccgacca gaaacgcgtc gtcacgccgc gtgccgcgct
     2161 ggaccgcgga gcgtcgatcc tggtaatcgg ccggccgatc acgggggcgg acgatcccga
     2221 ggcagccttg aaggcaatcg ccgcgacctt gtaggtggac aagcggcgcc cgttgggctt
     2281 agccgcgcga cgtcacgaaa ggcccgagaa atgtcctggc tcagccgagt ccgaagcgga
     2341 attccgttcc ttcccaagcg tcagtcgacc gatacccttt ggcacaagtg tgcaaagtgc
     2401 gggacgatgg tgttcctgaa ggagtgggag gacaatcagc gtgtttgtcc gcgctgcgat
     2461 ttccacgacc ggatcgggcc caggcaccgg ttccgctacc tgttcgacga cgacaagtac
     2521 gagcttctcc ccgccccgga ggtcaaggaa gatccgctca agttccgcga taccaagcgc
     2581 tacaccgatc ggctgaagga cgcccgctcg aagaccggcg agcgcgatgc gctgatcaat
     2641 gcgcgcggga ggatcggcgg acaccgcgcc gtcgtcggag tgcaggactt cgcgttcatg
     2701 ggcggttcga tgggcgtggc ggtgggcacc gccttcatca acgggatccg cgcggcgatc
     2761 gaagacaaga gcccctacgt aatcttcaca gcctcgggcg gagcgcggat gcaggaagcg
     2821 gtgctgtcgc tgatgcagct gccgcgaact acagtggcaa ttcgcgagct caaggaagcg
     2881 gggcttccct atatcgtcgt cctcaccgac ccgacgactg g
//
LOCUS       DATAKH010000173         2653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_28511,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000173 DATAKH010000000
VERSION     DATAKH010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28511"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VHN55_07120"
     CDS             complement(<1..453)
                     /locus_tag="VHN55_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008993351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEX2803738.1"
                     /translation="MTIDSAGRDGDELNLSLDGWEGPLDLLLSLARAQKVDLAQISIL
                     ELVEQYLAYLGDARALKLEIAADYLVMAAWLTYLKSCLLLPKDPEADPSPEEIALRLQ
                     MRLQRLDAMREAGARLLGRDRLGRDVFQRGSPEGLRLVRKSAWHASAFD"
     gene            complement(536..1543)
                     /gene="nagZ"
                     /locus_tag="VHN55_07125"
     CDS             complement(536..1543)
                     /gene="nagZ"
                     /locus_tag="VHN55_07125"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEX2803739.1"
                     /translation="MQAAIYGFGGTALTRDERGFFKDADPAGYILFKRNCEDREQLRA
                     LTDSLRDLSGRSDLPILIDQEGGRVARMQPPQWVKFPAGWTFAELYRKAPVSAIEAAM
                     ANARALALMLRDCGITVDCLPLLDVRQQGADDIIGDRALGDDPMQVAALGRAVLDGFA
                     SAGVVGVVKHMPGHGRALVDSHKELPVVDASEDELAVDVEPFERLSWAPMGMMAHVVY
                     TAWDPEHPASQSPTVIRDIIRGRIGFDGFLMSDDSNMNALTGSQAERAAACVAAGCDV
                     ALPCNGVLSDNVTIAGRLGEITPEGAERLRQAMVIAGGTSDGPPFEELIAKRDDLLAL
                     A"
     gene            complement(1543..2241)
                     /locus_tag="VHN55_07130"
     CDS             complement(1543..2241)
                     /locus_tag="VHN55_07130"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEX2803740.1"
                     /translation="MSDLRSGYDEDSLPWLQEVEDEDAPSGISARTMLLGLVIVAVVV
                     ALIAAAFFWVGSRNGGVAGEPELIRAPDTPYKVKPTDPGGLDIAGESQATFDTSAGRD
                     VDSRLDLRGTGREDIVTPPPDVEPKRIPPNETKEPVPAEKPAPPPSPKPSGASGSVIQ
                     LGAYSNSAQAERAWAALSTRFAVLGGMTKIVVPYSANGSSGYRLRAAASSPDAARQAC
                     RAIEAGGESCFIAR"
     gene            complement(2243..>2653)
                     /locus_tag="VHN55_07135"
     CDS             complement(2243..>2653)
                     /locus_tag="VHN55_07135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /protein_id="HEX2803741.1"
                     /translation="EASKDNPVFYVQYAHARICSLRRKAADAGVELSTPADLSLLDDE
                     ELALVKLAAQYPRTVEGAAMAHEPHRIAFYLYDLAAAFHALWNRGNDDPGRRFLLDNN
                     PQLSRARLELALGIGQIIRSGLDLMGVEAAEEMR"
BASE COUNT          436 a          911 c          873 g          433 t
ORIGIN      
        1 gtcgaatgcg ctcgcgtgcc acgccgactt gcggaccagc cggagcccct cgggcgagcc
       61 gcgctggaag acgtcgcggc cgagccggtc gcggccgaga aggcgggccc ctgcttcgcg
      121 catcgcgtcg agccgctgca gccgcatctg caggcgaagc gcgatctctt cagggctcgg
      181 gtcggcctcg ggatccttgg gaagcagaag gcacgacttc aaataagtca gccacgccgc
      241 catcacgaga tagtcggcgg caatttcaag cttcagtgcc cgggcgtcgc ccagataggc
      301 cagatattgc tcgactagct cgaggatcga gatttgcgcg aggtcgacct tctgcgcgcg
      361 ggcgaggcta aggagcaggt cgagcgggcc ctcccaaccg tcgaggctga gattgagctc
      421 gtcgccgtcg cggcccgcgc tatcgatggt caccacaccc acgcgggcaa aatagcccca
      481 tctcgtgatg atgcgaagct ccaaccacaa gattttgtgg ataatgtagc cccagtcagg
      541 ccagcgccag caaatcgtcg cgcttggcga tcagctcctc gaaaggcggc ccgtcggacg
      601 tgccgccggc gatcaccatc gcctggcgaa gccgctccgc gccctcgggc gtgatttcgc
      661 ccagccgccc ggcgatggtg acattgtcgg agagcacgcc gttgcagggc agcgccacgt
      721 cgcatcccgc ggcaacgcag gccgccgccc gctccgcctg gcttccggtc agcgcattca
      781 tgttgctgtc gtcgctcatc aggaagccgt cgaagccgat ccgcccgcgg ataatgtcgc
      841 gaattactgt tggcgactgg ctggccgggt gctccgggtc ccaggcggtg taaacgacat
      901 gcgccatcat ccccatcggc gcccagctga ggcgctcgaa cggctcgacg tccaccgcca
      961 gctcgtcttc gctggcgtcg acgaccggga gttccttgtg gctgtcgaca agcgcccggc
     1021 cgtggcccgg catatgcttc acaactccga ccacgccggc cgaggcgaag ccgtcgagga
     1081 cggcgcggcc gagcgccgca acctgcatcg gatcgtctcc tagagctcgg tcgccaatga
     1141 tgtcatcggc gccctgctgg cgcacatcga gaagcggtag gcagtcgacg gtgatcccgc
     1201 agtccctgag catcagcgcc agagcccggg cgttggccat cgccgcctcg atcgccgaga
     1261 ccggcgcctt tctgtacagc tcggcgaagg tccagccagc gggaaatttc acccattgcg
     1321 gcggctgcat ccgcgccact cgcccgccct cctggtcgat caggatcggc aggtcggagc
     1381 ggccggacag gtcgcgaagc gaatccgtga gcgccctcaa ttgctcccga tcctcgcaat
     1441 tgcgcttgaa gaggatgtag ccggcggggt cggcatcctt gaaaaagccg cgctcgtccc
     1501 tggtgagcgc cgtgccgcca aagccgtaaa ttgcggcctg catcagcgcg cgatgaagca
     1561 gctttcgccg cccgcctcga tcgcccggca cgcctgccgg gcagcatcgg gcgacgacgc
     1621 cgccgcccgg agtcgatagc cgctgctccc gttggcggaa taagggacga cgatcttcgt
     1681 catcccgccc agcaccgcaa agcgggtgct aagcgccgcc caagctcgct cggcctgggc
     1741 gctattactg taggcgccga gctggatcac gctgcccgac gcgccggacg gcttgggcga
     1801 aggaggcggc gcgggctttt cggcgggtac cggctccttc gtttcgtttg gcgggattcg
     1861 cttcggctcg acatccggcg gcggagtcac gatgtcctcg cgcccggtcc cgcgcaggtc
     1921 gagccgcgaa tccacgtccc tgccggcgct ggtatcgaac gtcgcctggc tctcgccggc
     1981 aatatcgagg ccgccggggt ccgtcggctt gaccttgtaa ggcgtgtcgg gcgcgcggat
     2041 cagctccggc tccccggcga ccccgccatt gcggctcccg acccagaaga aggccgccgc
     2101 gatcagcgcg acgacaacgg cgactattac gaggcccaga agcatggtcc gagcggagat
     2161 tccgctcggc gcgtcctcgt cctcgacttc ctgcagccag ggcagcgaat cttcgtcata
     2221 gccgctgcga aggtcgctca tctcaccgca tctcctcggc ggcctccacg cccatcaggt
     2281 cgaggccgct gcggatgatt tgcccgatgc cgagcgccaa ttccagacgc gcgcgcgaaa
     2341 gctggggatt gttgtcgagc aggaatcgcc gcccgggatc gtcgttgccg cggttccaca
     2401 gagcgtggaa ggcggcggcg agatcgtaga gatagaaagc gatccggtgc ggctcatggg
     2461 ccatcgccgc gccttcgacg gtgcgcggat attgggccgc gagcttcacc agcgccagct
     2521 cctcgtcgtc gagaagggag aggtcagcgg gcgtgcttag ctccacgcct gcgtcggcgg
     2581 ccttgcgccg aagcgagcag atgcgcgcat gcgcgtactg gacatagaag acgggattgt
     2641 ccttcgacgc ctc
//
LOCUS       DATAKH010000174         2637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_11285,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000174 DATAKH010000000
VERSION     DATAKH010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11285"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..556)
                     /locus_tag="VHN55_07140"
     CDS             complement(89..556)
                     /locus_tag="VHN55_07140"
                     /inference="COORDINATES: protein motif:HMM:NF013340.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEX2803742.1"
                     /translation="MANDTLTRFTLASEDFQDGKPIPAVHSCDGADRSPALSWDEPPL
                     GTKSLALIMDDPAAPDGTFRHWAAYDIPATTRSISRGESVGKQAANDFGKSGYGGPCP
                     PKGHGVHHYHFKLYALDVDGLTVPADAKVEQVEEEAQRHAIAKAEIVGTFERS"
     gene            953..1324
                     /gene="rpsL"
                     /locus_tag="VHN55_07145"
     CDS             953..1324
                     /gene="rpsL"
                     /locus_tag="VHN55_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEX2803743.1"
                     /translation="MPTINQLIRKGRDPQKAKSKVPAMEQNPQKRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTNQREVISYIPGEGHNLQEHSVVLIRGGRVRDLPGVRYHVLRGVL
                     DTQGVKDRRQSRSKYGAKRPK"
     gene            1385..1855
                     /gene="rpsG"
                     /locus_tag="VHN55_07150"
     CDS             1385..1855
                     /gene="rpsG"
                     /locus_tag="VHN55_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005862793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEX2803744.1"
                     /translation="MSRRRRPEKREILPDPRFGDLVLSKFMNSVMLDGKKSVAEGIVY
                     GALDTVEARLKKDPLAVFHDALNNIKPGIEVRSRRVGGATYQVPVEVRPERAQALAIR
                     WLISAARARAEKTMAGRLSGELMDASQNRGNAVKKREDTHRMAEANRAFSHYRW"
     gene            1960..>2637
                     /locus_tag="VHN55_07155"
     CDS             1960..>2637
                     /locus_tag="VHN55_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010411116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX2803745.1"
                     /translation="MARSHPLERYRNIGIMAHIDAGKTTTTERILYYTGKSYKIGEVH
                     EGSATMDWMEQEQERGITITSAATTTFWKAEDGQGPDHRINIIDTPGHVDFTIEVERS
                     LRVLDGAVAVFDGVAGVEPQSETVWRQADKYKVPRMCFINKLDRTGADFYFCVQSIID
                     RLGAKPLVMYLPIGSESDLKGVVDLVNMRGIVWQDESLGANFDYVDIPDELKDKAAKY
                     RHDLLETV"
BASE COUNT          496 a          846 c          843 g          452 t
ORIGIN      
        1 gccggtccac ctgccggcga acacacgggc gctagctgac cgctgccgcc cttattatga
       61 gcgactagcg gcgcatcgtc tccgatagct acgaccgctc gaaagtaccg acgatttcgg
      121 ccttggcgat cgcgtgccgc tgggcttcct cctcgacctg ctcgaccttg gcgtcggcgg
      181 ggacggtgag gccgtcgacg tcgagcgcgt agagcttgaa gtgataatgg tgcacgccat
      241 gacccttggg cgggcaaggg ccgccatatc cggacttgcc gaaatcgttg gccgcctgct
      301 tgccgacgct ctccccgcgg gagatcgagc gggtggtcgc cggaatgtca taggccgccc
      361 agtgccggaa ggtgccgtcg ggcgcggcgg gatcgtccat gatcagcgcc aggcttttcg
      421 ttcccagcgg cggctcgtcc cagctcagcg ccggggaccg gtcggcgccg tcgcagctgt
      481 ggacggcggg gatcggcttc ccgtcctgga agtcttcgct ggcgagggtg aatctggtga
      541 gggtgtcgtt tgccactggt cctcctccat tggttcggtt ggccgagtca tcgcctgcgc
      601 cgcagcttgc gagcgcggcc gcgagaagcg ccgggcgaag tcgtttccac atgtcgagca
      661 ccggcctttt gagtcgcgaa cccccagcca acggagcgcg cgtcttgtct gttccgccgc
      721 tcgccccaca ttgacgctgc tttgcccgac aggcgttgac gctggcgggc gccgaagcta
      781 ttgggccggc cgtccgcgcg acctgtgtct cagttgcgag cgggcaaaag agctgaacat
      841 tgctcaactt gcgcgtcgcc gggcggccag agaagctgct ttggctccgc gctctttttg
      901 ttgagcaaag taaccgccgg gatttccggc atataaaaag gtgaagggct tcatgccgac
      961 gattaaccag ctgatccgca agggtcgcga cccgcagaag gccaagtcga aggtccctgc
     1021 gatggagcag aacccgcaaa agcgcggagt ctgcacccga gtctatacga cgaccccgaa
     1081 gaagccgaac tcggcgcttc gcaaggttgc caaggtccgc ctgaccaacc agcgcgaagt
     1141 gatcagctac atccccggcg agggccataa cctccaggag cacagcgtcg tgctgatccg
     1201 cggcggccgt gtgcgcgact tgcccggcgt tcgctatcac gtgcttcgag gagtgctcga
     1261 cactcagggt gtcaaggacc gcaggcagtc gcgttccaaa tacggcgcca agcgtcccaa
     1321 ataaccaagc gagagtaagc cccggacgtg ttccggaaca ggctgaagag aaaggaacaa
     1381 tcgcatgtcc cgtcgtcgcc gcccagaaaa gcgcgaaatc ctgcccgatc cccgtttcgg
     1441 ggacctggtc ctgtccaagt tcatgaattc ggtgatgcta gacggcaaga agtcggtcgc
     1501 cgaagggatc gtctatggtg ccctcgacac cgtcgaggct cgcctgaaga aggacccgct
     1561 ggcggtcttc cacgacgctc tcaacaacat caagccgggc atcgaggtcc gctcgcggcg
     1621 tgtcggcggc gcgacctatc aggttcccgt cgaagtgcgt cccgagcgcg cccaggcgct
     1681 tgccatccgc tggctcattt cggctgcgcg cgctcgcgcc gaaaagacca tggccggccg
     1741 gctttcgggc gagctgatgg atgcttcgca gaatcgcggc aacgccgtga agaagcgcga
     1801 ggacacgcac cggatggccg aagcgaaccg cgccttcagc cattatcgtt ggtaacagtc
     1861 tcccgccggc acgccggcgg gtggcgctgg taagaatcgt acctatatcg tggccagccg
     1921 gcgcatgccg gctccccaca tcgccaagga agaattgaaa tggcccgcag ccatccgctc
     1981 gaacgctatc gcaacatcgg catcatggcc cacattgacg ccggcaaaac gacgacgacc
     2041 gagcgaatcc tctactacac cggcaagtcc tacaagatcg gcgaggtcca tgagggctcg
     2101 gcgacgatgg actggatgga gcaggagcag gagcgcggca tcacgatcac gtcggccgcc
     2161 accaccacct tctggaaggc ggaagacggg caggggcccg accaccggat caacatcatc
     2221 gacacgcctg ggcacgtcga cttcaccatc gaggtcgagc gctcgcttcg agtgctcgac
     2281 ggcgcggtcg cggtgttcga cggcgttgcc ggcgtcgagc cgcagtcgga gacggtgtgg
     2341 cgccaggcgg acaagtacaa ggtcccgcgg atgtgcttca tcaacaagct cgaccgcacc
     2401 ggcgccgatt tctacttctg cgtccagtcg atcatcgatc gcctcggcgc aaagccgctg
     2461 gttatgtatc tcccgatcgg gtcggagagc gatctcaagg gcgtcgtcga cctcgtgaac
     2521 atgcgcggca tcgtctggca ggatgaatcg ctgggcgcga acttcgacta tgtcgacatc
     2581 cccgacgagc tcaaggacaa ggcggccaag taccggcacg acttgctcga gaccgtc
//
LOCUS       DATAKH010000175         1887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_18868,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000175 DATAKH010000000
VERSION     DATAKH010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18868"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VHN55_07160"
     CDS             complement(<1..419)
                     /locus_tag="VHN55_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX2803746.1"
                     /translation="MAKIKVKNPVVELDGDEMTRIIWQWIRERLIQPYLDVDLLYYDL
                     SIEKRDETDDRITVEAAEAIKKHGVGVKCATITPDEARVKEFGLKEMWKSPNGTIRNI
                     IGGTIFREPIICKNVPRLVPNWTQPIVVGRHAFGDQYR"
     gene            527..1261
                     /locus_tag="VHN55_07165"
     CDS             527..1261
                     /locus_tag="VHN55_07165"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEX2803747.1"
                     /translation="MPELEKPDSPLATTNTKWRFPSVHPEGRKFLLISAVATLVVYGA
                     ISHFLGWLMVGLTIWVAAFFRDPIRTTPQGNFVVAPADGLITTIARVSPPRELAGADG
                     LADAEMTRVSIFMSVFDVHINRSPVGGRVRKMVYVPGKFLNADLDKASEENERQHFLI
                     EGEGFHVGVTQIAGLVARRILTFVQPGDAVEAGQRIGMIRFGSRVDVYLPAGTGPRVL
                     LGQRAIAGETVLAEIGVEPALAGRRQ"
     gene            1258..>1887
                     /locus_tag="VHN55_07170"
     CDS             1258..>1887
                     /locus_tag="VHN55_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003040168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX2803748.1"
                     /translation="MRGEGAGTAGIPFRALVPNAVTALALCFGLTGIRFAIGGEWDKA
                     LGAIVVAGVLDGMDGRIARLLRADSRFGAELDSLSDVIAFGVAPALVIFLWSLADAPQ
                     FGWTAALALALACALRLARFNARIDSEDQPHKSAGFNTGVPAPAGAGLAFVPIYLWLI
                     TGQEVFRSWYVTMPWTLFVALLLISSIATFSWSSLRVRRSSRLFAIAGIG"
BASE COUNT          276 a          595 c          632 g          384 t
ORIGIN      
        1 cggtactggt cgccgaaggc gtggcggccg accacgatcg gctgggtcca gttggggacg
       61 aggcgcggca cgttcttgca gatgatcggc tcgcgaaaga tcgtgccgcc gatgatgttg
      121 cggatcgtgc cgttcggcga cttccacatc tccttgaggc cgaattcctt cacgcgggcc
      181 tcgtccgggg tgatggtcgc gcacttgacg ccgacgccgt gcttcttgat cgcctcggcc
      241 gcctcgaccg tgattcgatc gtcggtttca tcgcgcttct cgatcgacag gtcgtaatag
      301 agcaggtcga cgtcgaggta gggctggatc agccgttcgc ggatccactg ccagatgatt
      361 cgggtcattt cgtcgccgtc gagctcgacg accgggttct tcaccttgat cttggccatg
      421 tctgtcctgt tgtcctggga ttggccgggc gcataggcga agcgtccgaa cgaacgcaac
      481 cacgcccgat tgtgaatggt tcctagccac tctaatggca tcccccatgc ctgagctcga
      541 aaagccggat agcccgctcg ccaccaccaa caccaagtgg cggtttccct cggtccaccc
      601 ggagggccgc aaattccttc tgatttccgc agtcgcgacg cttgtcgtct acggcgcgat
      661 cagccacttt ctcggatggc tgatggtggg actgacgatc tgggtcgcgg ctttctttcg
      721 cgacccgatc cggacgactc cgcaaggcaa tttcgtcgtc gcgcccgccg acgggcttat
      781 caccaccatc gccagggtgt cgccgccccg cgagcttgcc ggagccgacg gccttgccga
      841 tgccgagatg actcgggtgt cgatcttcat gagcgtcttc gacgtccaca tcaaccgctc
      901 cccggtcggg gggcgagtcc gcaagatggt ctacgtcccg ggcaagttcc tcaacgccga
      961 cctcgacaag gcgagcgaag agaatgagcg ccagcatttc ctgatcgagg gcgagggctt
     1021 ccacgtcggc gtgacccaga tcgccgggct cgtcgctcgg cggatcctga ccttcgtcca
     1081 gccgggcgac gcggtcgaag cgggtcagcg gatcgggatg atccgcttcg gaagccgggt
     1141 cgacgtctac cttccggcag ggacggggcc gcgggtgcta ctcggccagc gggcaatcgc
     1201 cggtgaaact gtgctcgccg agattggagt cgagccggcg ttggcgggcc gcaggcagtg
     1261 aggggggagg gggccgggac cgctggaatc ccgttccgcg cgctcgtccc taatgccgta
     1321 actgcgctgg ctctatgttt cggcctcacg gggatccgtt tcgcgatcgg cggagaatgg
     1381 gacaaggcgc tcggtgcgat cgtcgtcgcc ggggttctcg atggaatgga tggccggatc
     1441 gcccgcctgc tgagggcgga cagccgcttc ggggccgagc tcgacagcct gtccgacgtc
     1501 attgccttcg gagtcgcgcc ggcgctcgtg atcttcctgt ggtcgttggc ggacgctccg
     1561 cagttcggat ggactgcggc gctggcgctt gcgctggcct gcgcgctgcg gcttgcgcgg
     1621 ttcaacgcgc gcatcgactc cgaagatcag ccgcacaagt ccgccggctt caataccggc
     1681 gttccggcgc cggcgggggc agggctcgcg ttcgttccaa tctacctgtg gctcatcacc
     1741 gggcaggagg tgtttcggtc gtggtacgtg acgatgccgt ggaccttgtt cgtcgcactg
     1801 cttctgatct cgagcattgc cacgtttagc tggtcgagcc tgcgggtgcg gcgttcttcg
     1861 cggctgttcg caattgccgg catcgga
//
LOCUS       DATAKH010000176         2082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32712,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000176 DATAKH010000000
VERSION     DATAKH010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32712"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..611)
                     /locus_tag="VHN55_07175"
     CDS             complement(<1..611)
                     /locus_tag="VHN55_07175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017666394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX2803749.1"
                     /translation="MATDVKVPALGESITEGTLAQWLKKAGDAVAADEPIASLETDKV
                     TVEVPSPVAGVLTETVAKEGDTVEVGAVIARIDEKAEAGAPAEKGAESTGTNPPGAGE
                     NPELRDEEKVPEPEPEEDGGETSASDHITTLSPAVRRAVLEHHVDPTSIKGTGKDGRI
                     TKDDVLAAAKAKESGSPAEAGAQAPQAKAPAPEKKASPPGPRPS"
     gene            complement(629..2082)
                     /gene="sucA"
                     /locus_tag="VHN55_07180"
                     /pseudo
     CDS             complement(629..2082)
                     /gene="sucA"
                     /locus_tag="VHN55_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006831916.1"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
BASE COUNT          310 a          687 c          665 g          420 t
ORIGIN      
        1 gaaggccggg gcccaggagg cgaagccttt ttctcgggcg ccggcgcttt cgcctgcggc
       61 gcctgggccc cggcctccgc cggtgaaccg ctttccttcg ccttggccgc cgcaaggacg
      121 tcgtccttgg taatccgccc gtccttgccg gtgcccttta tgctggtggg atcgacgtgg
      181 tgctcgagca cagcgcgacg aacggcgggg gaaagcgtag tgatatggtc ggacgcgctg
      241 gtctcgcccc cgtcttcttc cggctcgggc tcgggcactt tctcctcgtc gcgaagctcg
      301 gggttctcgc cggctcccgg cgggttagtg ccagtagatt ccgcgccttt ctccgcaggc
      361 gctccggcct cggccttctc gtcgatccgt gcaatgacgg ctccgacttc gacggtgtcg
      421 ccttccttcg ccaccgtttc ggtcagcacg ccggcgaccg gcgaggggac ctcgaccgtc
      481 accttgtccg tctcgagact ggcgatcggt tcgtcggcgg cgacggcatc gccggccttc
      541 ttcagccact gggcaagcgt gccttcggtg atcgattccc caagcgcggg gactttcacg
      601 tcagtggcca ttttactccc ttgcttggtc aggacgcgcg gcgggcgctc tctcgtgcgg
      661 cgctgctatg gcccaacgcg tcggcaatca aggccgcctg ttgctccgaa tgccgcttgg
      721 ccaggccggt tgccggcgat gcggccggtg cgcggccggc gtaacgcggg cgcattccct
      781 tgaacccggc ctcctcgaga cagcattcga gcaatgggtc aacgaagaac caggcgccat
      841 tgttctgcgg ctcctcctgg gcccacacca gctcctccaa tttcgacatc gccttgaggc
      901 gcttgaccag cggctccgac gggaacggat aaagctgctc gattcggacg acctccgtct
      961 gcttgtcgcc ggcctcgtcg cgcgcctcca tcagctcgta ggcgagcttg cccgagcaca
     1021 ggaccagccg ccgggtctcg ccgccggcag gcgggctcag gtcgctgatg atgcgcttga
     1081 aatggctgtc gcctgtgaag tcgtcgaggt tcgagactgc ggccttgtgg cgaagcagag
     1141 acttgggagt catcaccacc agcggcttgc ggaagggccg cagcagctgg cgccgaagga
     1201 tgtggaagta gtttgccgga gtcgtgcagt tggcgacctg catattgtcc tcggcgcaaa
     1261 gctgcaggta gcgctccagc ctcgccgagc tgtgctccgg gccctggcct tagaatccgt
     1321 ggggaagcag catcacgagg ccgctcgccc gcaaccattt cgcttcgccg ctggcgatga
     1381 actggtcgat gatcgtttgc gcgccgttgg cgaaatcgcc gaattgcgcc tcccagcaca
     1441 ccagggtctt cggatcggcg agcgaatagc cgtattcgaa accgagcacg ccgaactcgc
     1501 tcaacggcga atcgcgaacc tcgaagcggc cgccgtcgat ggatttgagc gggatatatt
     1561 tctcgcccgt ctgctgacaa agccagacct cgtggcgctg gctgaaggtt ccgcggccgc
     1621 tgtcctggcc ggacaagcgg acatgatgcc cctcggaaag cagggttccg aacgcgagtg
     1681 cttctgcggt ggcccagtcg atgccttcgc ccgtctcgaa catcgccttt ttggcatcga
     1741 ggatccgctg cagcgttttg tgaatctgga tgtcgcctgg aaccgtcgtc agcgtgacgc
     1801 cgatcttgca cagctgttcc ttggagacgg cagtgttgat gttgcgccgg gcgagcaccg
     1861 gctcttcggg cttgccaaga ccggtccagc gaccttcgaa ccagtccgcc ttgttcggca
     1921 ggtaagagcc tgccgcctcg aactcttcct ccagccgggc gacgaacgcc ttcgtgtgct
     1981 ggtcgaccca tctggcgtcg atcacgcctt cgtcaatcag gcgcgccgcg aacaattcgc
     2041 ttaccggcgg atgctgacgg atggtcttgt acatcagcgg ct
//
LOCUS       DATAKH010000177        28452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_38611,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000177 DATAKH010000000
VERSION     DATAKH010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 28452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28452
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38611"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1477)
                     /locus_tag="VHN55_07185"
     CDS             complement(<1..1477)
                     /locus_tag="VHN55_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX2803750.1"
                     /translation="MRILLLPLLLVLTAATTPADLARWKAEAARVTIVRDDWGIAHVS
                     GPTDADAVFGMIYAQAEDDFPRIEANYLTSLGRTAEAEGEEAMWQDLRARLYYPQEKL
                     QADYAKSPGWLKKLMDAWADGLNYYLATHPDVKPRAITHFEPWMALSFTEGSIGGDIE
                     RIDLGELQKFYEGRQTVAEAESDPEPRGSNGIAIAPKITAPGTGSLLLINPHTSFFFR
                     SELHMTSDEGLNAYGAATWGQFFIYQGFNEHAGWMHTSTGADAVDEFAYEVTLPELGP
                     RYRYGSKWRVMEQRPVTIRYKKADGSTGQRSFMTYYTHRGPIVRSELTSTCAPPPQSD
                     QRICWIAFAMMDRPVPALEQSFLRTKTRDLASFLTIAERRANSSNNTVFADDKGAIAY
                     LHPQFIPVRDNRFDYTKLVDGSDPATDWRGDTPLDKLPNAIDPPTGWVQNTNNWPWSS
                     AGSAGPNAKDFPKYMDVFGENPRGVHAVSLLSGTSGWTLAKL"
     gene            1851..3137
                     /locus_tag="VHN55_07190"
     CDS             1851..3137
                     /locus_tag="VHN55_07190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803751.1"
                     /translation="MADAAKNNIAGLRIPPGTYFISSTLPIDIDDFQIIAHGATISSA
                     MTATKPLIRVAGDNVSIVGLRTLLTAAVTTTHHYRVTGRSCHIDRCNMEYASAQNTPA
                     FYVRGGDGFRLTNSRKSGSNEFIGLLEASDVLIASNQIYGVTGGDDAIALKAITRSSE
                     NIRIVDNYVYRHSAIVSFGSQIGMAKADDPRHSRAVRRVHVEGNVADECARIAFIKPG
                     ALRSDYRDGLVENVVFRNNKLRDLKGVTFQRGFEISAGHGGIVRNVTGEGNTITARAN
                     GDSSTGRKVGALLIEHSGGGANGSIEDIDIGIAFVDPHDGAPFGSPGTSGHPVQNIVR
                     IDPKKLNLGKVNLRIDGNGCSESGVLILPGADSKVTIEKLKITNYNGKNHRLHGGIRT
                     GSAIIESGDDIVLSGNGRPRVTDAGGSFATKRPTQN"
     gene            complement(3169..5682)
                     /gene="ligD"
                     /locus_tag="VHN55_07195"
     CDS             complement(3169..5682)
                     /gene="ligD"
                     /locus_tag="VHN55_07195"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017181249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEX2803752.1"
                     /translation="MAKRAELDIATYNKKRDFSKTKEPKGRKLKGKGDSFVVQKHDAS
                     HLHYDFRLEMDGVLKSWAVPKGPSLDPAEKRLAMRTEDHPLDYGDFEGTIPKQEYGGG
                     TVMLWDHGRWIPEPGKDPRKTIEEGHLHFTLEGDRMKGEWVMFRLKPRKPSDRESWML
                     KKVDDKFAEPEHGDELVEDCTTSVTTGRTMAEIASGTDVWRSNRGGQKGGRAKTKASG
                     APPPFQPPQKATLVDEVPGGSGWLFEYKYDGYRLLIATGSGAATAWTRNGKDWSDRFR
                     ALVKAAEALPPGCLIDGEAVALNDKGKPDFQLLQSTLKEQRGKNLVFYAFDLLVDRGE
                     DITGLGNLERKERLSSLLEKAPSTIVFGDHVVGRGGALFDQVCKQGGEGVIAKKADSK
                     YRGDRTRNWLKIKCIERQEFVIVGWTTSDKRAGFRSLLLAAKEKGRLTYVGKVGTGFN
                     TQMLHDLMDVMKPLEVKSAPVEIPRADRKGAHYIKPELVAEIAFTEFTSEGILRHPSF
                     IALREDKPAEEVVVEKPKDLPKAAKKGAAKTQAKKRGHSTPETFGIKISNPDRAIYPT
                     EKLTKGDLADYYAAIDPLIMADARNRPITLIRCPQGRAKKCFFQKHDTGSMGEHVKHV
                     PIREKKGEVQDYLYFDDIRGLLSCVQMGTIEFHGWGSRADDVEHPDRLVFDLDPDEGL
                     EFGDVRKGAVRIRELLADIGLETFPMLTGGKGIHVIAPLDQSADWKAVSSFAERFARA
                     VSEAEPDMFTANMRKVQRKGRIFLDWLRNQRGSTAVMPYSARAREGAPVAAPIAWDEL
                     GDYEGGNAFTIRELDLLFERAESKLLKGWGEAKQALPKA"
     gene            complement(5686..6594)
                     /locus_tag="VHN55_07200"
     CDS             complement(5686..6594)
                     /locus_tag="VHN55_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEX2803753.1"
                     /translation="MAARPVWRGQIRLALVSIPVELYPATKSGASISFHQVHEPTGKR
                     IRYEKVVPGIGPVDRDEIMKGYEVSKGHYVLLDPEEIEKVKLESKKTLDLVQFVDVGD
                     IDAMYYEKPYYVVPGDDLAEDAFVVLRDALRKSKKIGIGQLAMRGQEYVVALKPCGKG
                     ILLETLRYADEVHKANSYFREIGDSKPDEDMLDLASMLIEKKTGDFDPKEFHNRYVDA
                     LRELIEEKQRRKGEKIIQDPDADEPPPRGGNVIDLMAALKKSLETGGRESTKAKGKAK
                     AKPAPRSKARPRSTGTKKKAAAGGRK"
     gene            6712..6785
                     /locus_tag="VHN55_07205"
     tRNA            6712..6785
                     /locus_tag="VHN55_07205"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6744..6746,aa:Gly,seq:tcc)
     gene            6915..7000
                     /locus_tag="VHN55_07210"
     tRNA            6915..7000
                     /locus_tag="VHN55_07210"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6949..6951,aa:Tyr,seq:gta)
     gene            7178..7753
                     /locus_tag="VHN55_07215"
     CDS             7178..7753
                     /locus_tag="VHN55_07215"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX2803754.1"
                     /translation="MPDPARKDDLPADIEPQLADRVAKLTPGQLDCVRLVAEHLSSKE
                     IAAELGISPHTVDQRIRQSLQTLGVSRRAQAARIVSHFSEPYQRLIHQSPYIEPAAST
                     SDENGAVSNQIRHVDRAGEAWGSAGFHTEQKYGLSRSSLQLPFATRSHPRNEMGVGLR
                     LLWIVAIATGAAFSAGMYLAGLESLARLLKS"
     gene            7824..8165
                     /locus_tag="VHN55_07220"
     CDS             7824..8165
                     /locus_tag="VHN55_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803755.1"
                     /translation="MRKQIIQNAAFDVATQVRVVEETIDSALAEIAELQARVMRANSV
                     AGVGFATAHPTLEKLATAVASLVETRGSMVDCHAALADAKGKVPGLRTVNYGDEECPP
                     PSGKADLKIVA"
     gene            8218..8649
                     /locus_tag="VHN55_07225"
     CDS             8218..8649
                     /locus_tag="VHN55_07225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803756.1"
                     /translation="MAPYLFRFLLIAITLYAFLRGGREERAVALLCVIGAAATHAVIS
                     PLHDRFEEVESAVLLVDLALLAGFVAIALRSERFWPLWMAGIQLTTVMGHAMKQIESD
                     LLPRAYAASLGFWAYWTLAILAVAVWRTQRRRLQADSPPLH"
     gene            8697..9440
                     /gene="rlmB"
                     /locus_tag="VHN55_07230"
     CDS             8697..9440
                     /gene="rlmB"
                     /locus_tag="VHN55_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012817430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEX2803757.1"
                     /translation="MSRRKKSHQAHGSANRPRFWGRHAVAAALDNPRRTVLRAWATRD
                     AAAAMQFPKDIALTLADVADLGRLVPNDAPHQGVVIEVEPLADVWLDDILNGAAERAV
                     LLILDQVTDPHNVGAILRSAAAFGAIGIVTQDRHSPPESGALAKAASGTLETVPWART
                     VNLARALDDIADAGFWRIGLTGDAPTELREALGPKRIALVVGAEGPGLRPNTREHCDA
                     LARLPISESVESLNVSNAAAVALYAAGVA"
     gene            9440..10057
                     /locus_tag="VHN55_07235"
     CDS             9440..10057
                     /locus_tag="VHN55_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HEX2803758.1"
                     /translation="MVRTTDSILAAVKALAEREPAFAAVVEKHGIPQPRRSEPGAHTL
                     LRTIVGQQVSVAAARSMWAKLEAAYGSPPELSAIIAASDKELRLAGISRQKAGYARSL
                     AELVLSGELDLAALPGDDEEAIAHLVRIKGIGRWSAEIYLLFAEGRADVWPAGDLAVQ
                     VEIGRLLGLSEKPSEKYLREIAEAWRPHRGAAAILAWHSYNSAVL"
     gene            complement(10061..11200)
                     /locus_tag="VHN55_07240"
     CDS             complement(10061..11200)
                     /locus_tag="VHN55_07240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803759.1"
                     /translation="MKARLRIIVAACFLLTAGAPALAQEAGAPPQNEVVGPPQLRDFT
                     LNGTVTRPAPPPASEQPRQQPPARQQPIPAPRTPPQATSPDSSAPSRDVTQPAREQPQ
                     SSAGDRVDLPPPPPPPEPSFDAGEAAATAPPPPDEAESFSGLSILPWILVALAGAGAA
                     AWFFLRQRPRESFAGVGESDLFEAPPPPAPAAARPVEAPLPPEPKPVATGVVSSRLRP
                     WLELEFTPERGVIDHEKAMIGFELSVYNSGSVPARNVLLLAALINGGPMQEQQIRLFF
                     DNPGAGDDRIPVIPPLQRVTLNTRVVLAREQIRPIEVEGRQLFVPMVAFNAIYGWSGG
                     TGQTSASYLVGKQTSGEKLAPFRLDLGSRIFRNLAAREHEYRIRK"
     gene            complement(11309..12001)
                     /locus_tag="VHN55_07245"
     CDS             complement(11309..12001)
                     /locus_tag="VHN55_07245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010413316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEX2803760.1"
                     /translation="MIDIRPFATLGHADHGWLDARHHFSFASYHDPDRMGWGAIRVWN
                     DDRIAAKSGFPPHPHRDMEIVTYVRTGAITHKDSMGNEGRTEAGDVQVMSAGTGVVHS
                     EFNLEDEATTLFQIWIETDKPGAAPAWGAMPFPKDSREGSFQLLASGDPRDGALTINA
                     DARVLGATLKGGSSIRYDADPGRHLYLVSSETVRVNGQEANPRDGIAITGEERVEIEG
                     GQDAELVLVDAR"
     gene            complement(12039..13835)
                     /locus_tag="VHN55_07250"
     CDS             complement(12039..13835)
                     /locus_tag="VHN55_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2803761.1"
                     /translation="MAAPVLSYENLGLVQGEGWLFRGLDLYVGERDRLALIGRNGAGK
                     TTLLKCLADHIDTDEGRRTIVPGTRVVLLEQDPAIGGEGTLLDWVLSGANAPAAHEAA
                     AIADQIGIDLNRPAATASGGERRRAAIVRALAQAPDVLLLDEPTNHLDLGAIEWLEQW
                     LGRFAGAFIVISHDRTFLKRLTKSCIWLDRGKLRRAEIGFGGFEAWTEKVIEEEARAA
                     EKLDSKLALELRWLERGVTARRRRNQGRLAKLQEMRAQRAAMLGGPGTAKLALAKDQV
                     RSKAVIEADRVSKSFGDREIVRDFSLRIQRGDRIGLVGPNGAGKTTLLKLLTGEIEPD
                     IGTVTRARTLSGIVIDQQRKLMDPGKSVRDILTHGGDWIDVRGHRKHIKGYLKEFLFE
                     PAIADAPVGSLSGGERSRLLLAREFAREANLLVLDEPTNDLDLETLDLLQEVIADYEG
                     TVLLVSHDRDFLDRTVTITLGLDGSGEVDIVAGGYADWEKRRSPAKAAAQDRRKALPP
                     RRPGLRPSQGSKLTYKDQRDLDRLPQEIERIELEIAATEEALHDPELYSRNPERFAQL
                     TKRLETLRSDKAAAEERWLEVAAMAEAMQAQS"
     gene            13982..14278
                     /locus_tag="VHN55_07255"
     CDS             13982..14278
                     /locus_tag="VHN55_07255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803762.1"
                     /translation="MRLYRSLFPAALAAGLLAGPAFADPPPRDAKRAFEATRDGRSMP
                     LPMIEHRIIPLMPGADYLGPEFNGETYRLKFVKNGRVIWIDVDAATGRIVRRSR"
     gene            14448..15122
                     /locus_tag="VHN55_07260"
     CDS             14448..15122
                     /locus_tag="VHN55_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2803763.1"
                     /translation="MRVLIVEDEPNLGRQLRSTLEGAGYAVDLATDGEDGHFLGSTEQ
                     YDAVVLDLGLPEVDGLTVLDRWRKEGRKMPVLILTARDSWSDKVAGLDAGADDYLAKP
                     FQTEELIARLRALIRRASGNASSELIAGDIRLDTRSGKVTKAGEPVKLTAQEYKLLSY
                     LMHHKGKVVSRTELIEHIYDQDFDRDSNTIEVFVTRIRKKLGPDVITTIRGLGYSLEE
                     PEERRL"
     gene            15209..16516
                     /locus_tag="VHN55_07265"
     CDS             15209..16516
                     /locus_tag="VHN55_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003044437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2803764.1"
                     /translation="MIVVAALWISILLVTGGFALDRVLTASVIRNFDEQLVYVLNNAL
                     IAAAEIGPEGEVRFSRQPADQRFLQTYSGVYFQVSGDGFETFPSRSLWDRRLKVTSHQ
                     VHVEPHIYNSNEFAGEPLRIAERDVVLPGSDTRWRFQVAQSREAIDEQIHELRTTLFW
                     SFAALGAGLLILAALQTIYGLWPLRRVRREVVAIRSGNKQRISDNFPTEIQPLTEEIN
                     QLLAHSEAQAEEARRHAGNLAHALKTPLSVVTNAATAHSPDLDQTVIREASVMRRQVD
                     HHLARARAIGRRASVQARARVWTSAEAVQRAIDRLYEGVTVDIAGDRTAEVRVERQDL
                     DEMIGNLVENAAKYGNGRVFMTVERHDSTVDIVVEDDGPGIPEREREALFARGARLDT
                     DKPGTGLGLAIVRDVADIYGGRISLEESEDLSGLLARLTLPAG"
     gene            16549..17562
                     /locus_tag="VHN55_07270"
     CDS             16549..17562
                     /locus_tag="VHN55_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEX2803765.1"
                     /translation="MSATVQPLHPGNEPSLEPLMQLVADDMNGVNSVILDRMHSKVAL
                     IPELAGHLIAGGGKRMRPMLTLACARLLSYPGTRHHKLAAAVEFIHTATLLHDDVVDG
                     SGTRRGKRTANLIWGNSASVLVGDFLFSRAFELMVEDGSLKVLKILSSASSVIAEGEV
                     EQLTAQRRIETDEEQYLAIIGAKTAALFAAACRVAPVVAEAGEEVEVALESYGKHLGI
                     AFQLVDDVIDYASDPAIMGKGVGDDFRDGKMTLPLILAYARANEEERAFWRSAVSGER
                     VGDDDLARAIALMRSSDALSDTIEFARLYGRRAIDALAPFPSGKAKTALIEAVEFAIR
                     RAY"
     gene            17608..17889
                     /locus_tag="VHN55_07275"
     CDS             17608..17889
                     /locus_tag="VHN55_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase ubiquinone Fe-S protein 4"
                     /protein_id="HEX2803766.1"
                     /translation="MTVARISEIDRRTTQSGRANAGLWLLEFERSEPQRPDPLTGWNG
                     SGDTNTQVKLTFRTRDEAVAYAERRNIAYHIVPATPVKLKIQAYSDNFR"
     gene            17958..19064
                     /gene="wecB"
                     /locus_tag="VHN55_07280"
     CDS             17958..19064
                     /gene="wecB"
                     /locus_tag="VHN55_07280"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEX2803767.1"
                     /translation="MVIGTRPEAIKLAPVAAALAERGIGPMLVFTGQHPKLDRPEYGL
                     ADYAAVRLDCPGQEDPNIHVGLVTKALLPVLAGTAPSVVVVQGDTSSALGGALAARIA
                     KVPVAHVEAGLRSHDLRRPWPEEEFRVAIDRDAELLFAPTELSAANLRRERVHGRICV
                     TGNTGIDAVLAVRGRIEPAERDSDLPRLLVTCHRRENWRRGISGLATALREIASQRLA
                     RVEVLLHPNPELAGRVRALLFGHPGISLNRPFGHSETIAAMVRSRLVLSDSGGMQEEA
                     SALGVPLLVLREKTERPEAIAGGGVELVGIDPAAIVRAVRRRLAQAGGGVATNLFGDG
                     RAGERIADVIEQWLGEREALSPRCPAVPRTAASW"
     gene            complement(19059..19134)
                     /locus_tag="VHN55_07285"
     tRNA            complement(19059..19134)
                     /locus_tag="VHN55_07285"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19098..19100),aa:Glu,seq:ctc)
     gene            complement(19180..20559)
                     /locus_tag="VHN55_07290"
     CDS             complement(19180..20559)
                     /locus_tag="VHN55_07290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803768.1"
                     /translation="MKRNVYFAASAIALASVPAAAMAQDQHQHQPAMDMPAPQPSPQQ
                     SPPADEPMDHSQMDHPQMTGDEHEGHAMTGALGPYPMTRESSGTAWQPDSSAHLGLMR
                     NSGEWTLMAHGVANLVYDHQSGPRGDDKLFASGMLMGMASRPLGNGTVQFKAMVSPDP
                     LMGKSGYPLLLASGETADGVDRLIDRQHPHDFFMELSASVSQNIAPESSVFLYGGLPG
                     EPAFGPPAFMHREAILDSPEAPISHHWLDSTHISFGVLTGGIVIGRAKLEVSRFNSRE
                     PDQHRWDIETGPLDSTAVRLSWNPTRTLALQGSWGKFEDPEQLEPGVDQERWSASALW
                     ADEVAPGWKLAGTLAWGRKTIDHHGEALSDDAFAAEASVKHSGWTVFGRGEITENREL
                     LALEEHGPAYRVGKVSLGAVRDFRIAEHFSVGAGGLVALNFVPDSIAPLYGGNNPVGT
                     MAFIRLKLD"
     gene            20638..21084
                     /locus_tag="VHN55_07295"
     CDS             20638..21084
                     /locus_tag="VHN55_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803769.1"
                     /translation="MILRSGLCLVGMHCLHHLVALLHHLGHLLVLLVAGLARLLVLRV
                     LGMLRLRVGSYCLSSWRGCGKRRGNECKHLYSPEFEWIVFEVSGARGGGVAISKRIPV
                     NFVAGAGFSGASVTGRISSGRNSAAGSAAEQAIVHSAMTPFACPDE"
     gene            complement(21260..21655)
                     /gene="cueR"
                     /locus_tag="VHN55_07300"
     CDS             complement(21260..21655)
                     /gene="cueR"
                     /locus_tag="VHN55_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010219216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006878 - intracellular copper ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HEX2803770.1"
                     /translation="MKIGQVAAASGITPRMIRHYEKIGLIDTAARRDSGYRDYDERDV
                     HTLRFIARARDLGFSVDEIGKLLALWNDRSRASAEVKALALARAAELKRKERELHDMR
                     RSLEHLAQSCHGDDRPECPILGGLEGVAK"
     gene            complement(21652..23955)
                     /locus_tag="VHN55_07305"
     CDS             complement(21652..23955)
                     /locus_tag="VHN55_07305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX2803771.1"
                     /translation="MVRDPVCGMKVDTRTAKHRHALGDTDYYFCSERCLDRFKADPDR
                     YLNPPGASEEHPALGALAESAEGTIWTCPMHPEVRRDVPGSCPICGMALEPLEPTVEE
                     QANPELIDMSRRFWISAALSVPLLVLVMGSELFGLDLLPMRVSIWVQLALTTPVVLWG
                     GWPFFERMWSSLKTRNLNMFTLIGLGVGVAYGYSVVASLAPQIFPESLRTMGGFVPVY
                     FEAAAVITTLVLLGQVLELRARAATGKAIRALLGLAPKTARRVTDGKEEDIPLSDVHV
                     GDLLRVRPGEKIPVDGIVVEGRSSVDESMISGEPVPVEKTADEKITGATVNGTGTLLM
                     RAERVGRDTMLSQIVRMVAAAQRSRAPIQGLADKVSAWFVPSVVAVSVLAFVAWSLFG
                     PAPPLSHAIVNAIAVLIIACPCALGLATPMSIMVGTGRGASAGVLIKNAEALELMEKV
                     DTLVVDKTGTLTLGKPKLIAVELAEGFDESEVLRLSAALERGSEHPLAAAIVEGADER
                     ELKVPASSDFESHTGKGVTGTVAGRKVALGNSALMEAAGVDVSGLEQRAAEHQGEGSG
                     AMFVAIDGQSAGLLVVADPVKETAADAIAELHRDGITVVMMTGDNGRTAAAVARKVGI
                     DEVLAEVLPDQKQAKVEQLKREGRKVAMAGDGINDAPALAAADVGIAMGTGTDVAMES
                     AAITLVKGDLRGIVRARHLSRATMRNIRQNLFFAFVFNAAGVPIAAGALYPWFQILLS
                     PIVAGAAMSLSSVTVIGNSLRLRRAKL"
     gene            complement(24088..24384)
                     /locus_tag="VHN55_07310"
     CDS             complement(24088..24384)
                     /locus_tag="VHN55_07310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803772.1"
                     /translation="MASIEDSDTQTGDDQRLSMVDEALVAGTIANTNGLLVILAKMVA
                     KGVFDEDDLTAFSDSYSKPLDHVGMRENELVGQMQDQMESTLAELMRYLRERDG"
     gene            complement(24422..24922)
                     /locus_tag="VHN55_07315"
     CDS             complement(24422..24922)
                     /locus_tag="VHN55_07315"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033958 - DNA-deoxyinosine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HEX2803773.1"
                     /translation="MDVIVKHGLPPVARPDARLFVLGSLPGDASLAAKRYYAHPRNGF
                     WRLIGSVVGEDLHSLGYAERLERLTANRIGLWDVVAHATRRGSLDQAIRDAGHNPLAD
                     YFAGFPHLEAVAFNGAAAAKAGRQLLGGVARLSLIDLPSSSPANTRPFAEKAQAWGQL
                     ARYCEC"
     gene            24962..26119
                     /locus_tag="VHN55_07320"
     CDS             24962..26119
                     /locus_tag="VHN55_07320"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX2803774.1"
                     /translation="MQPSDIRLALFSGNYNYVRDGANQALNRLVDYLLRRGVQVRIYS
                     PTVEHPAFEPTGDLVSLPSAAIPRRPEYRIPTGIPARVRRDLSAFDPNIVQISSPDVA
                     AHRAVSWARKRGIPVVASVHTRFETYLSYYHLQLFEPMLRAALRRLYRRCDALLVPAK
                     STAAVLRAQRMNSNIYMWSRGVDREQFNPGRRDMAWRRQVGIADDELAIAFLGRLVLE
                     KGLDVFAEAIERLRKRGVPHHPLVIGDGPARSWFEQQMPNGIFLGQQVGDDLGRALGS
                     ADVFFNPSLTETFGNVTLEAMACGLPVVAASATGATSLVRDGKTGVLVEPGDVDAFAD
                     ALQAYARDPGLRRSHGQAGLDFARTQDWDEINASVLRVYETIVERRSRQSI"
     gene            complement(26112..26801)
                     /locus_tag="VHN55_07325"
     CDS             complement(26112..26801)
                     /locus_tag="VHN55_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX2803775.1"
                     /translation="MPRHHRRHRHNDDMPPIPPVPPMPPEPPHDGASVRFGNLAQMFA
                     SGRGFRGNWGPFHFDFGDMPGGRGGGRGRRGRRRMFESGELRLVLLKLIADEPRHGYD
                     LIRAIEEMTGGEYAPSPGVIYPTLTMLEDMGHIAERKSKDSKKVFEATDDGRAHLDER
                     SDEVEELIERLEELAPEERHDAGPAIGRAVRNLMTALTHRVGRDGLNDELLHEIAAIL
                     DEAAQRIERIK"
     gene            26899..28239
                     /locus_tag="VHN55_07330"
     CDS             26899..28239
                     /locus_tag="VHN55_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007682835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEX2803776.1"
                     /translation="MADLFGEPALSTPPHEAAANAPLADRLRPKALSEVVGQEHLTGP
                     EGAIGRMVAAGKLGSMILWGPPGTGKTSIARLLADAVGLRFVAISAVFSGVADLKKIF
                     AEARQMAEAGRQTLLFVDEVHRFNRSQQDGFLPYVEDGTVTLVGATTENPSFELNAAL
                     LSRCQVLILHRLDEAALGALIERAEAEIGAPLLLTPEAREALIASADGDGRFLLNQVE
                     TIFDVEPKEPLDPAAMAALLHRRVPVYDKDREGHYNLISALHKSLRGSDPQAALYYLA
                     RMLVAGEEPLYVIRRLVRFASEDIGLADPQALVQCLAAKDAYDFLGSPEGELAIVQAC
                     LYCAVAPKSNAAYAAQKGAWRTAKDSGSVMPPAHILNAPTKLMKDIGYGKGYAYDHEA
                     EDAFSGADYWPEELERQDFYRPSDRGFEAKVRERLEFWDERRRALQSDDSKQGS"
     gene            28246..>28452
                     /locus_tag="VHN55_07335"
     CDS             28246..>28452
                     /locus_tag="VHN55_07335"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803777.1"
                     /translation="MYEMGGANGYWQGQLMYWGPKVLIAILILVATWIVARVVKWALQ
                     KAIDRIPALRTHTTGGPKETVGHQL"
BASE COUNT         4805 a         9292 c         9124 g         5231 t
ORIGIN      
        1 gcagcttcgc caaggtccag ccgctcgttc ccgacagcag cgagactgcg tggactccgc
       61 gcgggttctc cccgaacacg tccatatatt tggggaagtc tttcgcgttc gggcctgccg
      121 agcctgcgga agaccatggc cagttgttgg tgttctgcac ccagccagtc ggcgggtcga
      181 tcgcgttcgg cagcttgtcg agcggcgtgt cgccgcgcca gtcggtagcc gggtcggacc
      241 catcgaccag cttggtatag tcgaagcggt tgtcgcggac cgggatgaac tgcgggtgca
      301 aataggcaat cgcgcccttg tcgtcggcga agacggtatt gttcgagcta ttagccctcc
      361 gctcggcgat agtgaggaaa gaggcgaggt ccctcgtctt cgtccgcagg aacgactgct
      421 ccagcgccgg gaccggccgg tccatcatcg caaaggcgat ccagcaaatg cgttgatccg
      481 actgaggcgg aggggcgcaa gttgaagtca actcgcttcg gacgatcggc ccgcgatgcg
      541 tgtagtaggt catgaagctg cgctggccag tgcttccgtc ggccttcttg tagcgtatcg
      601 tcaccgggcg ctgctccatt acgcgccact tgcttccgta acggtagcgc ggcccgagct
      661 ccggcagcgt cacctcgtag gcgaattcgt cgacggcatc ggctccggtc gacgtgtgca
      721 tccaccccgc gtgctcgttg aagccctggt aaatgaagaa ctggccccag gtcgcggcgc
      781 cataggcgtt cagcccctca tcgctcgtca tgtgcagctc ggagcgaaaa aagaagctgg
      841 tgtgcgggtt aatcagcaga agcgatcccg tgcccggcgc tgtgatcttg ggcgctatgg
      901 cgattccgtt ggagccccgc ggctcaggat cggattcggc ttccgcgacc gtttgccttc
      961 cctcgtagaa cttctgaagc tcgcccaggt cgatccgttc gatatcgccg ccgatgctgc
     1021 cttcggtgaa gctcagcgcc atccacggct cgaaatgggt gatcgcccgc ggtttcacgt
     1081 cgggatgggt cgcgagatag tagttcagcc catcggccca ggcatccatc agcttcttca
     1141 gccagccggg gcttttcgca tagtccgcct gcagtttttc ctgcgggtaa tacagccgcg
     1201 cgcgcaggtc ctgccacatt gcttcctcgc cctcggcttc ggcggtgcgg cccagcgatg
     1261 tgaggtaatt ggcctcgatc ctcgggaagt cgtcctccgc ctgcgcgtag atcatgccga
     1321 acaccgcgtc ggcgtcggtc ggcccgctca cgtgcgcgat cccccagtcg tcgcgaacga
     1381 tggttacccg cgccgcctcg gccttccagc gcgcgaggtc ggccggggtc gtggcagcgg
     1441 tgaggacaag gaggagcggc aggagaagga tgcgcatcgc gcatttgtag ccgccggtcc
     1501 gcgagggtcc agtgccgcat atgcgacgcc gctcagtgag tgggcacgtt gggcgtgaaa
     1561 gtggcacgaa gtgaggttcg cccgcgacgg gcctccctgt tcacgggcgc aggttgaatc
     1621 tacttgggtt ctcagtgtca cgcatgaagg acgatctgtc gcggcgagga gcgctggcag
     1681 ccattggtgc caccggcatc attgcattgg cgcccgcacc tttcgtcaag gcgaggcccg
     1741 gcgattctac gttgggcgcg ggcggttccc gcgttcagga cgggttcccg tcgcttgcgg
     1801 actacggacg acttggaagc ggtgatgaca gtgcggtgtt cgctgccgcc atggccgacg
     1861 ccgcgaagaa caacattgcg gggctccgga ttccccccgg aacctatttt atctcgtcaa
     1921 cgctaccgat cgacatcgac gacttccaga tcatcgctca cggggcgacg atcagctccg
     1981 ctatgaccgc caccaagccg ttgataaggg tcgcgggcga caatgtttcg atcgtcggtc
     2041 ttcgcacgct gctgacggcg gcggtcacga cgacgcatca ctatcgagtg accgggcgaa
     2101 gctgccatat cgatcgctgc aacatggaat atgcgtccgc ccagaacacg cccgcattct
     2161 atgtgcgtgg cggcgatggc ttcaggctga ccaattcccg aaagagcgga agcaacgagt
     2221 tcatcggcct cctggaagcg agcgacgtcc tgattgcgtc gaaccagatt tatggcgtca
     2281 cgggaggcga cgacgcgatt gcgctcaagg cgattacgcg ctcgtcggaa aacatccgga
     2341 tcgtcgacaa ctacgtctac cgccactcgg caatcgtgtc gttcggatcg cagatcggga
     2401 tggccaaggc cgacgacccc cgccattcgc gcgctgttcg aagggtgcat gtcgagggaa
     2461 acgttgccga cgaatgcgcg cgtatcgcct ttatcaagcc gggcgcgctc cgatccgatt
     2521 atcgagacgg cttggtcgaa aacgtcgtct tcaggaacaa caagctgagg gatctgaaag
     2581 gggtaacatt ccagagaggc ttcgaaatta gcgccgggca tgggggaatc gttcgcaacg
     2641 ttacgggcga gggcaacacc atcactgcgc gcgccaatgg cgacagctcc acgggccgaa
     2701 aggtcggagc gctcctcatc gagcactccg ggggtggtgc gaatgggtca atcgaagaca
     2761 tcgacatcgg aatcgccttc gtcgacccgc acgatggcgc tcccttcggt tcgccgggaa
     2821 cctcgggcca tccggttcag aacatcgtgc gaatagaccc gaagaaactc aatctgggca
     2881 aggtgaacct ccggatcgac ggcaacggct gttcggaaag tggtgtcctc atcctccccg
     2941 gcgcggactc caaggtcacg atcgagaagc tgaagatcac gaactacaac gggaaaaatc
     3001 acaggttgca cggtggaatc aggaccggct cggcgatcat cgagagcggc gacgatattg
     3061 tgctcagcgg caacggcagg ccgcgggtga ccgacgccgg aggctccttt gcgaccaagc
     3121 ggccgacgca aaattgagct gtttgttctt cgcgtgcaaa gcgggcgttc acgccttcgg
     3181 tagcgcctgc tttgcttctc cccagccctt gagcaatttc gactccgccc gctcgaacag
     3241 caaatcgagc tcgcgaatgg tgaaggcgtt gccgccttcg taatcgccta gctcgtccca
     3301 ggcgatcggg gcggcgaccg gggcgccttc gcgggcccgt gccgaataag gcatgactgc
     3361 agtcgagccg cgctggttgc gaagccagtc gaggaagatt cggcctttgc gctggacctt
     3421 gcgcatgttg gcggtgaaca tgtccggctc cgcttcggaa accgcccgtg cgaagcgttc
     3481 cgcgaagctc gacactgcct tccagtccgc cgactggtcc agcggggcga taacgtggat
     3541 tcccttgccg ccggtgagca tcgggaaggt ctccaggccg atgtcggcaa gcagctcgcg
     3601 aatccggacc gcccccttgc gaacgtctcc gaattcgagg ccttcgtcgg ggtcgaggtc
     3661 gaacaccagc cggtcggggt gctcaacgtc gtcggccctg cttccccagc cgtggaattc
     3721 gatcgtgccc atctgaacgc aggacaacag gccgcggata tcgtcgaagt aaagatagtc
     3781 ctgcacctcg cccttcttct ctcggatcgg cacgtgcttg acgtgctcgc ccatcgatcc
     3841 ggtgtcgtgc ttctggaaga agcatttctt ggctcggccc tgggggcagc gaatgagggt
     3901 gatcggccgg tttctcgcgt ccgccatgat caatgggtcg atggccgcat aataatcggc
     3961 gaggtcgccc ttggtcagct tttcggtggg atagatggcg cggtcgggat tgctgatttt
     4021 gatcccgaaa gtttctggag tcgaatgacc gcgctttttc gcctgcgtct tggcggcgcc
     4081 cttcttggcg gctttcggaa ggtccttcgg cttttcgacc acgacctcct ccgccggctt
     4141 gtcctcgcgc agcgcgatga agctcgggtg gcgcaatatg ccttcggaag tgaactcggt
     4201 gaaggcgatt tcggcgacca gctcgggctt gatgtagtgg gcgcccttgc ggtcggcgcg
     4261 tggaatttcg accggcgcgg acttcacctc gagcggcttc atcacatcca tcaggtcgtg
     4321 gagcatttgc gtgttgaagc ccgtgccgac cttgccgacg taggtgagcc tgcccttttc
     4381 cttcgccgca agcagcagcg agcggaagcc ggcccgcttg tcgctcgtag tccagccaac
     4441 gataacgaac tcctggcgct cgatgcactt tatcttgagc cagttgcgcg tgcggtcgcc
     4501 gcgatatttc gaatcggctt tcttggcgat gacgccctcg ccgccctgct tgcacacctg
     4561 gtcgaaaagc gcgccgcccc tgcccaccac atggtcgccg aagacgattg tcgacggcgc
     4621 cttttccaga aggctggaaa gccgctcctt gcgttcgaga ttgccaagcc cggtgatgtc
     4681 ctcgccgcgg tcgaccagga ggtcgaaggc gtagaagacg aggttctttc ccctctgctc
     4741 cttgagcgtc gattgcagca gctggaagtc gggcttgccc ttgtcgttga gcgcgaccgc
     4801 ctcgccatcg atcaggcagc caggcggcag cgcctcggcc gccttgacca gtgcccggaa
     4861 cctgtcgctc caatccttgc cgttccgggt ccacgcagtc gccgcgcccg aaccagtggc
     4921 gatcagcagg cggtatccgt cgtacttgta ttcgaacaac cagcccgatc cgcccggcac
     4981 ctcgtcgacg agggtcgctt tctgcggcgg ctggaacggt ggcggagcgc cgctcgcttt
     5041 tgtcttggcc cgcccgcctt tctgtccccc acggttcgag cgccacacgt cggtgcccga
     5101 agcgatctcg gccattgtcc gccctgtcgt cacgctggtg gtgcagtcct cgacgagctc
     5161 gtcgccatgc tcgggctcgg cgaacttgtc gtcgaccttc ttgagcatcc agctttcgcg
     5221 gtcgctcggc ttgcgcggct tcaaccggaa catcacccac tcgcctttca tccggtcacc
     5281 ttcgagggtg aagtggagat ggccttcctc gatcgtcttg cggggatcct ttccgggctc
     5341 gggaatccag cggccgtggt cccacagcat caccgtcccg ccgccatatt cctgcttagg
     5401 gatggtgccc tcgaagtcgc cataatcgag cggatggtcc tcggttcgca tcgccagcct
     5461 cttctcggcg ggatcgaggc tcgggccctt cggcaccgcc cagctcttga gcactccgtc
     5521 catctcaagc cggaaatcat aatggaggtg cgaggcgtcg tgcttctgga cgacgaagct
     5581 gtcgcccttg ccctttagct tgcggccctt gggttccttc gtcttcgaga agtcgcgctt
     5641 cttgttgtaa gttgcgatgt ctagctcggc gcgcttggcc atgatctatt tccgcccgcc
     5701 ggccgccgct ttcttcttgg ttcctgtgga acgagggcgc gccttgcttc gcggtgccgg
     5761 cttggccttc gccttgccct tagccttcgt cgattcgcgg ccgccggtct cgaggctctt
     5821 cttaagtgcc gccatcaggt caatgacatt gccgccccgc ggcggcggct cgtcggcatc
     5881 ggggtcctgg ataatcttct cgccttttcg gcgctgcttt tcctcgatca gctcgcgcag
     5941 cgcatcgaca tagcggttgt ggaattcctt gggatcgaaa tcgccggttt tcttctcgat
     6001 cagcatcgag gccaggtcga gcatgtcttc gtcgggcttg ctgtcgccga tttcgcggaa
     6061 atagctgttc gccttgtgga cctcgtcggc gtagcggagc gtctcgagaa ggatgccctt
     6121 gccgcagggc ttcagggcga cgacatattc ctgtccgcgc attgccagct ggccgattcc
     6181 gattttcttt gatttgcgaa gggcgtcgcg aagcacgacg aacgcatcct cggccagatc
     6241 gtcgccggga acgacgtaat atggcttctc ataatacatg gcgtcgatgt cgccgacgtc
     6301 gacgaactgg acgaggtcga gcgtcttctt gctctcaagc ttcactttct cgatctcttc
     6361 aggatcgagc aggacgtaat ggcccttcga tacctcatag cccttcatga tctcgtcacg
     6421 gtccacggga ccgatcccgg gcacgacctt ttcatagcgg atgcgcttgc ccgtcggctc
     6481 gtgcacctgg tggaaggaga tggacgcgcc gctcttcgtc gccgggtaaa gctcgaccgg
     6541 gatcgagacc agcgcgagcc tgatctgccc tctccaaacc ggacgtgcgg ccatggcttc
     6601 ctcctcgacg gcggattcaa tcgttccaat gccgagtcgt tcccgcttcc tcttgccaat
     6661 tgagttgacg atcccagatt ggcggtggca ttggccggtc cgcgggcgcg agcgggtgta
     6721 gctcaatggt agagcagaag ccttccaagc ttacgacgag ggttcgattc ccttcacccg
     6781 ctccaaaatt cgaccatgcg gggcatggtt gaattttgga gcgcacgcga ggctttagcc
     6841 tcgcggggcg acaaacgcct tcacgcgttg acacgtccga cccgcgccgc cacatggcgc
     6901 cactgcctgc acctggagag gtggccgagt ggttaaaggc agcagactgt aaatctgccc
     6961 gcgcaagcgt acgctggttc gaatccagcc ctctccacca cctttctccg atcatgctgg
     7021 aaagcggcgt cgcagaagcg taggccggga tctcgcggtg tcgtacttaa cgaaagataa
     7081 ccgtctgttc ttggccgaag tgtccattgt gacgtaagtt ggcgctgact cgggcgatgt
     7141 cgagtcacta tgactgaagc ttgaaaggac agctcgggtg ccggatcccg cgcgcaagga
     7201 tgatctcccc gcggatatcg agccacaact cgcggaccgc gtagcgaaac tgactccggg
     7261 gcagctcgat tgcgtgcgcc ttgtcgctga gcatctgtcg tccaaggaaa ttgcggccga
     7321 gctcggaatc tcgccccaca cagtcgatca gcgcattcgc cagtcgctgc agacgctcgg
     7381 cgtttcacgg cgcgcccagg cggcgcggat cgtttcccac ttcagcgagc catatcaacg
     7441 tttgatacat caatcgccgt acattgagcc ggcggcctcc acgagcgacg aaaacggcgc
     7501 ggtcagcaat cagattcggc acgttgatcg cgcaggggag gcctggggaa gtgcgggctt
     7561 tcataccgag cagaagtacg ggctatcccg gtcttccctg caactgccgt tcgcaacgag
     7621 gagccacccc cggaacgaaa tgggtgtcgg ccttcggctg ctctggattg tcgcaatcgc
     7681 gactggggct gctttttcgg cgggcatgta cctcgccggt ctcgagagcc tcgcgaggtt
     7741 gctgaagagc tagcccgacc gacctccaac tgaaaaccgg acaatttcac tccagggcag
     7801 ctgcctctgg agaaggagca gtcatgcgca agcaaattat ccagaatgcc gccttcgacg
     7861 tcgcaaccca ggtccgtgtg gtcgaagaaa ccatcgactc cgcgctggcc gagatcgccg
     7921 agcttcaggc gcgggtcatg cgtgcgaatt ccgtcgcggg ggtcgggttc gcgactgcgc
     7981 atccgacact cgaaaagctt gccaccgcgg tcgccagcct ggtcgagacg cgcggttcga
     8041 tggtcgactg tcacgccgcg ctagccgatg ccaagggcaa ggtgccgggc cttcgcaccg
     8101 tcaattacgg ggacgaagag tgcccgccgc caagcggcaa agcggacctg aagatcgtcg
     8161 cctgaggcca atgcttgacc gggccgcgca tgcgtggtcc ggtcgggcgc actcgccatg
     8221 gctccctacc tgttccgttt cctgctgatc gcgatcacgc tttacgcgtt cctgcgcggc
     8281 ggacgcgagg aacgggccgt cgccctgctc tgcgtgatcg gagcagccgc gacccacgcc
     8341 gtcatttccc cactgcacga tcgcttcgaa gaggttgaat ccgcagtcct gctcgtcgac
     8401 cttgccttgc tcgcgggttt cgtcgcgatc gccttgcgct cggagcgctt ctggccgttg
     8461 tggatggcgg gaatccagct gaccaccgtg atgggccacg caatgaagca gatcgagagc
     8521 gaccttctgc cgcgcgctta cgctgcctcg ctcggctttt gggcatattg gaccctggcc
     8581 attctcgccg tcgcagtgtg gcggacccag cgccggcgac ttcaggccga ctcgcccccg
     8641 ctccactgaa tctatgcggt tgcgctgccg ccgaagcgcc cgcatgagca tcgggcatgt
     8701 cccgccgcaa gaaatcgcac caggcccacg gttccgccaa ccggccgcgc ttctggggcc
     8761 gccatgcggt cgcggcggcg ctcgacaatc cccgccgaac cgtcttgcgc gcctgggcca
     8821 cccgcgacgc cgccgccgcc atgcaatttc cgaaagacat tgcgctgacg ctcgccgacg
     8881 tcgccgacct cggccgcctc gtccctaatg acgctccgca ccagggcgtc gtcatcgagg
     8941 tcgaaccgct cgcggacgtt tggctcgacg atatcctgaa cggcgcggcc gaaagggcag
     9001 tactactgat cctcgaccag gtcaccgacc ctcataatgt cggcgcgatc ctaaggtccg
     9061 cggctgcgtt cggagccatc gggatcgtca cccaggaccg ccattcgccg cccgagagcg
     9121 gagcgctcgc caaggccgcg tcgggtactc tggaaacggt gccgtgggcg cggacggtga
     9181 acctcgcccg cgctctcgac gacatcgccg atgcaggctt ctggcggatc gggctcaccg
     9241 gggacgcacc aacggagttg cgggaagcgc ttggcccgaa gcggatcgcg ctggtggtcg
     9301 gcgccgaagg acccgggctg aggccgaaca cacgcgagca ttgcgacgcg ctcgcccggc
     9361 taccgatcag cgagtcggtc gaaagcctga atgtttcaaa cgctgcagcg gtggcgctct
     9421 acgccgcggg agtcgcctga tggttcgcac cacagacagt attctggcgg ccgtcaaagc
     9481 gctcgcagag cgcgagcccg cgttcgcggc ggtcgtggaa aaacacggaa tcccccagcc
     9541 gcggcgaagc gagccgggag cacacacttt gctccggacg atcgtcggcc agcaggtcag
     9601 cgtcgccgcg gcgcgctcga tgtgggcgaa gctggaggcg gcctacggat cgccgcccga
     9661 actttcggcg atcattgctg caagcgacaa agaactccgt ctcgcgggaa tctcgcgcca
     9721 gaaggcgggc tatgcccgga gccttgccga gctggtcctg tcgggcgagc tggacctcgc
     9781 agcgctccct ggggatgacg aggaagccat tgcccatctc gtcaggatca agggcatcgg
     9841 ccgctggtcg gcggaaatct acctgttgtt cgctgagggg cgcgctgacg tctggccggc
     9901 cggcgatctc gccgtccagg tcgagatcgg gaggctgctc ggcctttccg aaaagccgag
     9961 cgagaagtat cttcgcgaga tcgctgaagc gtggcgcccc catcgcgggg cggcggcgat
    10021 ccttgcctgg cacagctaca acagcgccgt cctgtaggcg ctatttgcgg atccgatatt
    10081 cgtgctcgcg ggccgcgagg ttgcggaaga tgcgcgaacc caggtcgagc cggaacggcg
    10141 ccagcttctc gcccgacgtc tgcttcccga caagatagct ggccgaagtc tggccggtgc
    10201 cgccgctcca tccgtagatt gcgttgaagg cgaccatggg aacgaagagc tggcgcccct
    10261 ctacctcgat cgggcggatc tgctcgcgag cgagaaccac gcgggtattg agcgtgaccc
    10321 gctgaagcgg cgggatgacc ggaatcctgt cgtcacccgc gcccggattg tcgaagaaga
    10381 gccggatctg ctgctcctgc atcgggccgc cgttgatcag cgctgccaag agcagcacgt
    10441 tgcgggccgg gacgctgccg gaattgtaaa ccgacaattc gaacccgatc atcgcctttt
    10501 cgtggtcgat gacgccgcgt tccggcgtga attcgagctc gagccacggc ctcagccggc
    10561 tggaaacaac tcccgtcgcc accggtttcg gctctggagg gagaggagct tcgaccggtc
    10621 gcgccgccgc cggcgccggc ggcggcgggg cttcgaacag gtcggattcc cccactccgg
    10681 caaagctttc gcgcggccgc tgccggagga agaaccaggc cgcggccccg gccccggcca
    10741 aagcgacgag tatccacggc aggatcgaca ggccggagaa ggattcagct tcgtccggtg
    10801 gtggcggcgc tgtcgccgcc gcttcgccgg catcgaacga aggctccggc ggcggtggcg
    10861 gaggaggcag atcgacgcga tcgccagcgc tactttgcgg ctgctcgcgc gccggttgcg
    10921 taacgtcgcg acttggggcg ctgctgtccg ggctggtggc ttggggcggc gttcggggag
    10981 cgggtatcgg ctgctgtcgc gccggcggtt gctgcctcgg ctgctccgac gccgggggcg
    11041 gcgccgggcg agtcacggtc ccgttgagcg taaagtccct gagctgtggc ggcccgacaa
    11101 cctcgttctg gggcggtgcg ccagcttcct gtgcgagcgc cggggccccg gccgtcagca
    11161 ggaagcatgc cgcaacaatg atccgcaagc gcgccttcat gatcccccgg cgatgactgg
    11221 agtacgcgaa aactcgcgcg gaggcgctca tgccgccgcg cgagcgggac ttcaagcaca
    11281 gcttacatga acgtcagtcg accgggcctc agcgggcgtc gacaagcacc agttcggcgt
    11341 cttgcccgcc ttcgatctcg actctctctt cgccagtaat ggcgattccg tcgcgcggat
    11401 tggcttcctg cccgttgacc cgaaccgttt cgctggagac gagatagagg tgacggcccg
    11461 gatcggcgtc gtagcgaatg cttgagccgc ccttgagagt cgccccgagc acgcgcgcgt
    11521 cggcattgat cgtcagtgca ccgtcacgcg gatcgccgct agcgagcagc tggaacgacc
    11581 cttcgcggct gtccttgggg aacggcatcg caccccaggc gggcgcggcc ccgggcttgt
    11641 cggtttcgat ccagatctgg aagagcgtcg tcgcctcgtc ctcgagattg aactcggagt
    11701 ggacgactcc agtcccggca ctcatgacct ggacgtcgcc cgcctcggtg cggccctcgt
    11761 tgcccatcga atccttgtgc gtgatcgcgc cggtgcggac gtaggtcacg atttccatgt
    11821 cgcgatgcgg gtgtggcgga aagccgctct tcgcggcgat ccggtcgtcg ttccacacgc
    11881 ggattgcgcc ccagcccatg cggtccgggt cgtgatagct ggcgaaggag aaatggtggc
    11941 gggcatcgag ccagccgtgg tcggcgtggc ccagcgtggc aaagggacgg atgtcgatca
    12001 tgacctcaaa atggcgccgc actggaaggc ttcaagtgtc aggattgtgc ctgcatggcc
    12061 tccgccatgg cggcgacctc gagccagcgc tcctcggcgg ctgccttgtc cgaacgcagc
    12121 gtctcgagtc gcttcgtgag ctgtgcgaaa cgctccggat tgcgcgaata gagttccgga
    12181 tcgtggaggg cctcttccgt cgctgcgatt tcgagttcga tccgctcgat ctcctgcgga
    12241 agccggtcga gatcgcgctg gtctttgtaa gtcagcttgc tcccctgcga aggccggagc
    12301 ccagggcgcc gcggcggcag cgccttgcgg cgatcctggg ctgcggcctt cgccggagaa
    12361 cgccgcttct cccagtccgc atagccgccg gcgacgatgt ccacttcgcc cgagccgtcg
    12421 aggccaagcg taatcgtcac cgtccggtcg agaaaatcgc ggtcgtggct gacgagcagc
    12481 accgtcccct cgtagtccgc gatcacctcc tggagcaggt caagggtttc gagatcgagg
    12541 tcgtttgtcg gctcgtcgag gacgaggagg ttcgcctctc gggcgaattc gcgcgccagc
    12601 aggagccgcg atcgctcgcc gcccgacagc gagccgacgg gcgcgtcggc gatcgcgggc
    12661 tcgaacagga attccttcag ataccccttg atgtgcttcc tgtgcccgcg gacatcgatc
    12721 cagtcgccgc catgggtaag gatatcgcga acgctcttgc cgggatccat cagtttgcgc
    12781 tgctggtcga tgacgattcc cgacagggtc ctggcgcggg tcacggtgcc gatgtccggc
    12841 tcgatttcgc cagtcagaag cttcagaagg gtcgtctttc cggcgccatt ggggccgacc
    12901 agcccgatcc ggtcgccgcg ctggattcga agtgagaaat cgcggacgat ctctcggtcg
    12961 ccaaagcttt tcgatactcg gtcggcctcg atcaccgctt tcgagcgcac ctggtccttg
    13021 gccagcgcga gcttggcggt gcccgggcca ccaagcatcg ccgccctctg ggcgcgcatc
    13081 tcctgaagct tcgccagccg accctggttg cggcgccttc gggcagtcac gccccgctcc
    13141 agccagcgaa gctcgagcgc cagcttcgaa tcgagctttt cggccgccct ggcttcttcc
    13201 tcgatgacct tctcggtcca cgcttcaaaa cctccgaagc cgatctccgc ccgccgaagc
    13261 ttccctcggt cgagccagat gcagcttttc gtgagacgct tgaggaaggt tcggtcgtgg
    13321 ctgatgacga tgaacgcgcc cgcgaagcgg ccaagccact gttccagcca ttcgatcgcg
    13381 ccgaggtcga ggtgattggt cggttcgtcg aggagcagca cgtcgggcgc ttgcgcgagc
    13441 gcgcgcacga tggcggcgcg ccgccgctct ccaccgcttg ccgtcgccgc cggccggttg
    13501 aggtcgatcc cgatctggtc ggcgattgcc gcggcttcgt gggcggcggg cgcgttggct
    13561 ccggaaagca cccagtcgag aagagtccct tcgccaccga tcgccgggtc ctgctcgagg
    13621 aggaccacgc gagtgccggg aacgatggtc cgccgcccct cgtccgtgtc gatgtggtcg
    13681 gccaggcact tgagtaaagt cgtcttgccg gcgccgttgc ggccgatcag cgccagccgg
    13741 tcgcgctctc cgacatagag gtcgagtccg cggaacagcc agccctcgcc ctggacgagg
    13801 ccaagatttt cataagagag caccggagca gccacgaagc gcgcctaacg gaccagcttg
    13861 cgcaactgaa cccctcgtgt tgtatttccc ccacatgcga ttgcctgaac attggcaatc
    13921 gccagcattc ataggccatt caatggtttc tggtagaaga gcctcgaaat cgacattcgc
    13981 catgcgcctg tatcgttcgc tcttcccggc cgctctcgca gcgggcctcc ttgccggacc
    14041 ggctttcgcc gatccgccgc cgcgcgatgc caagcgcgcg ttcgaggcaa cccgcgacgg
    14101 ccgatcgatg ccgcttccca tgatcgaaca ccggatcatc ccgctgatgc ctggcgccga
    14161 ttatctcggc ccggagttca acggcgagac ttaccggctg aaattcgtga agaacggccg
    14221 cgtcatctgg atcgatgtcg acgcagccac cggccgaatc gtacgccgct cgcgctagtc
    14281 gcggcgctag cgtcgccggt accgccggca ttgacatttc gccctgtctc cccagttgcc
    14341 gttcagacat gccgggggca tgtcggcatg cggaaactca ttccggccaa gcaaccgttc
    14401 agctttgcgc gtgttgactg cccgaatggc tccaggggaa gacagaaatg cgcgttctga
    14461 tcgtcgaaga cgaacccaat ctgggacggc agctccgttc caccctggaa ggtgccggct
    14521 atgccgtcga cctggccacc gacggcgagg acggccattt cctcggctca acggaacaat
    14581 atgacgcggt cgtcctcgac ctcggccttc ccgaagtcga cgggctgacg gtgctcgacc
    14641 gctggcgcaa ggaaggcagg aagatgccgg ttctgatcct gaccgcccgc gacagctggt
    14701 cggacaaggt cgccggcctc gacgccggcg ccgacgatta cctcgccaag ccgttccaga
    14761 ccgaagagct gatcgcgcgc cttcgggcgc tgatccgccg ggcatcgggc aatgccagct
    14821 ccgagctgat cgccggcgat attcgcctcg acacccgctc cggcaaggtc accaaggccg
    14881 gcgagccggt caagctcacc gcgcaggagt ataagctcct ctcctacctg atgcaccaca
    14941 agggcaaggt ggtcagccgc accgagctga tcgagcacat ttacgaccag gacttcgatc
    15001 gcgattcgaa caccatcgaa gtgttcgtca cgcgtatccg caagaagctc ggtcccgacg
    15061 tcatcaccac catccgcggc ctcggctaca gccttgaaga gccggaggaa cggcgacttt
    15121 gaacgacgaa gccgccccgg cgacggcggc ggccgagaaa ggaccgcgcg cactcaagcg
    15181 gccgcacatc gggtcgctga cccggcggat gatcgtcgtc gcggcgctgt ggatctcgat
    15241 tctactcgtc accggcggat tcgccctcga ccgagtgctt accgcgtcgg taattcgaaa
    15301 cttcgacgaa cagctcgtct acgtgctcaa caacgcgcta atcgccgctg cggaaattgg
    15361 gccggaaggc gaggtgaggt tcagccgcca gcctgccgac caaaggttcc tgcaaactta
    15421 ttcgggggtc tatttccagg tctcgggcga cggcttcgag acatttccat caaggtcgct
    15481 ttgggaccgg cggttgaagg tcacaagcca ccaggtccac gtcgagcccc acatttacaa
    15541 cagcaacgaa tttgccggcg agccgctgcg catcgccgag cgcgacgtcg tcctgcccgg
    15601 atcggacaca aggtggcgtt tccaggtcgc tcaatcgcgc gaggccatcg acgagcagat
    15661 ccacgagctt cgcacgacct tgttctggag cttcgctgcg ctcggcgccg ggctactgat
    15721 cctggcggcc ctccagacga tctacggact gtggccgctt cgccgcgtcc ggcgcgaggt
    15781 ggtcgccatc cgttcgggca acaagcagcg gatttccgac aactttccca cggaaatcca
    15841 gccgctgacc gaggagatca accagctgct cgcgcatagc gaggcgcagg cggaggaagc
    15901 gcgtcgccac gccggcaatc tcgcccatgc tctgaagacg ccgctttcgg tcgtcaccaa
    15961 cgcagcgact gcacacagcc ccgatctcga ccagacggta atccgcgagg catcggtgat
    16021 gcggcgtcag gtcgatcatc atctcgcccg cgcaagggcg atcggccggc gtgcctcggt
    16081 gcaggcgcgg gcgcgggtgt ggactagcgc ggaagcggtt cagcgcgcga tcgaccgcct
    16141 ttacgaaggc gtgaccgtcg acatcgccgg cgaccggacg gcggaagtgc gggtcgagcg
    16201 gcaggatctc gacgagatga tcggaaacct ggtggaaaac gccgccaaat acggcaacgg
    16261 gcgcgtcttc atgaccgtcg agcggcacga ttccacggtc gacatcgtgg tcgaggatga
    16321 cggacccggc attccggagc gcgagcgcga agccctgttc gcccgcggcg cccggctcga
    16381 taccgacaag cctggaaccg gcctcgggct cgccattgtc cgcgatgtcg ccgacatcta
    16441 cggcggccgg atcagcctcg aggaaagcga agacctcagc ggattgctcg ccaggctaac
    16501 gcttccggcg ggctaggaaa tactgcctgc cggggctacg gcggcgcggt gagcgccacc
    16561 gttcaaccgc tgcatcctgg aaacgagccg tcgctcgagc cgctcatgca actcgtcgcc
    16621 gacgacatga acggcgtgaa ttccgtcatc ctcgaccgaa tgcacagcaa ggtcgccctg
    16681 attccggagc ttgccggcca cctcatcgcc ggcggtggca agcgaatgcg cccgatgctg
    16741 acgctcgcct gcgcaaggct gctgtcctat ccgggcaccc ggcatcacaa gctcgctgct
    16801 gcagtcgagt tcatccacac ggcaaccctt ctccacgacg atgtcgtcga tggatcggga
    16861 acgcgcaggg gcaagcgcac cgccaacctg atttggggca atagcgcgag cgtcctcgtc
    16921 ggcgacttcc tgttcagccg ggccttcgag cttatggtcg aggacgggag cctcaaggtg
    16981 ctcaagatcc tgagctctgc ctcaagcgta atcgctgagg gcgaggtcga gcagttgacc
    17041 gcccagcggc ggatcgaaac cgacgaggag caatatctcg caatcatcgg cgccaagacc
    17101 gccgccttgt tcgccgccgc ctgccgggtt gcccccgtcg tcgccgaggc gggcgaggag
    17161 gttgaggtgg cgctggagag ctacggcaag caccttggga tcgcattcca gctcgtcgac
    17221 gacgtcatcg actatgcgtc cgaccccgca atcatgggca agggggtcgg ggacgatttc
    17281 cgcgacggca agatgacgct cccgctgatt ctcgcctacg cgcgggcaaa cgaggaggag
    17341 cgcgcgttct ggcggtcggc ggtgtcgggc gaacgggtcg gcgacgacga cctcgcccgc
    17401 gcgatcgcgc taatgcgttc gagtgacgcg ctgtccgaca cgatcgaatt cgcccggctt
    17461 tacggacgcc gagcgatcga cgccctcgcc ccctttcctt cgggcaaggc gaagaccgcg
    17521 ctgatcgaag ctgtcgagtt cgcgattcgc cgtgcttact gacggccgtc ttgattccgc
    17581 ccgcgggctt tgccactcgc acggcgcatg accgtcgcgc gaatctcgga gatcgaccgc
    17641 cggacgaccc agtcgggccg ggccaacgcc ggtctgtggc tgctcgagtt cgagagaagc
    17701 gagccgcagc ggccggaccc gctgaccggc tggaacggat cgggcgacac caacacacag
    17761 gtcaagctga ccttccgcac ccgcgacgaa gcggtcgctt atgccgagcg ccggaacatc
    17821 gcctaccaca tcgtcccggc gacaccggtg aagctcaaga tccaggccta ttccgacaat
    17881 ttccgttgag tcctaacgcc gcctaggcca ccctgcgccc gccgagctag gggggaaggc
    17941 tgaccagtcg cgtattaatc gtcatcggta cccggcccga ggccatcaaa ctagcacccg
    18001 tcgcggccgc tctcgcagag cgaggcattg gtcccatgct ggtcttcacc ggacagcacc
    18061 ccaagctcga tcgccccgaa tacgggctag cggactatgc agcggttcgg ctggactgcc
    18121 cgggccagga agacccgaat atccatgtgg gcctggtgac gaaggcactc cttccggtcc
    18181 tcgccgggac cgccccctcc gttgtggtcg tccagggcga cacctcgagc gcgctcgggg
    18241 gcgcacttgc cgcaaggatc gcgaaagtgc cggtggcgca tgtcgaagcc ggcttgagga
    18301 gccacgatct ccggcgcccg tggccggaag aggaattccg ggtcgcgatc gaccgcgacg
    18361 ccgagctgct gttcgctccg accgagctca gcgcggccaa cctgcggcgc gaacgggtgc
    18421 acggccggat ctgcgtcacc ggcaataccg gcatcgacgc cgtgttggcg gtgcgcggtc
    18481 gaatcgagcc ggccgagcgc gattccgacc tgccgcggct cctcgtgacc tgccaccggc
    18541 gggagaattg gcgacggggg atcagcggtc tcgcgactgc gcttcgcgaa atcgcatccc
    18601 aacgtctggc gcgggtcgag gtcctgcttc acccgaaccc tgagctcgct ggccgagtgc
    18661 gcgcgcttct gttcggccac ccgggaattt cgctgaatcg gcccttcggc cattccgaaa
    18721 ccatcgcagc aatggtccgg tcgcgtttgg tcctaagcga ttccggcgga atgcaggagg
    18781 aggcttcggc gctcggcgtg ccgctgctcg tcctccggga aaagacggag cggccggaag
    18841 cgatcgcagg tggaggcgtg gagctggtcg gaattgatcc ggccgccatc gtccgagccg
    18901 tccgccggag actggcgcaa gcaggaggag gtgtggcgac aaacctgttc ggcgacggcc
    18961 gggcgggcga gcgaatcgct gacgtgattg agcagtggct aggggaacgg gaggcgctgt
    19021 cgccaagatg tccggctgtc ccccggacag ccgcatcttg gtgaccccta cgggactcga
    19081 acccgtgttt tcgccgtgag agggcgacgt cctagaccgc tagacgaagg ggccatcgct
    19141 gaaagcgagg gcgccatatg tgcactggcg ccccgctagt caatcgagct tcagccggat
    19201 gaatgccatt gttccgacag gattgtttcc gccgtaaagc ggagcgatcg agtccggcac
    19261 gaaattcagc gcgacgagac cgcccgcgcc caccgaaaaa tgctcggcaa ttcggaaatc
    19321 gcggacagcg ccaagactaa ccttcccaac gcgataggcc ggcccgtgct cctcgagtgc
    19381 gagcaactcg cggttctcgg taatctcgcc ccggccgaag acggtccatc cggaatgttt
    19441 caccgacgct tccgccgcaa aggcgtcgtc gctcagcgct tcgccgtggt gatcgatcgt
    19501 ctttcggccc caggcgagcg ttccagcgag cttccagccg ggcgcgactt cgtcggccca
    19561 caaggcgctt gccgaccaac gctcctggtc gacgccgggc tcgagctgct cgggatcctc
    19621 gaacttgccc cagctcccct ggagcgcgag ggtcctggtc ggattccacg atagtcggac
    19681 agcagtcgaa tcgagcggcc ccgtctcgat gtcccagcgg tgctggtcgg gctcgcgcga
    19741 attgaagcgg ctgacctcca gcttggcccg gccgatcacg atcccgccgg tcagcactcc
    19801 gaagctgatg tgcgtggaat cgagccaatg gtggcttatc ggcgcttcgg gcgaatcgag
    19861 gatcgcctcg cggtgcatga aggcgggcgg gccgaacgcc ggctcgcctg gaagtccgcc
    19921 gtagaggaag acgctgctct cgggcgcgat gttctgcgag acggacgccg aaagctccat
    19981 gaagaagtcg tgcgggtgct ggcggtcgat cagccggtcg acgccgtcgg ccgtctcgcc
    20041 gctcgcgagc agcagcgggt aaccgctctt gcccatcagc gggtcggggc tgaccatcgc
    20101 cttgaactgc acggttccgt tgccgagcgg gcgactagcc attcccatca gcattccgct
    20161 tgcgaacagc ttgtcgtcgc cgcgcgggcc ggactggtga tcgtagacga ggttggcgac
    20221 accgtgagcc atcagcgtcc attcgccgga gttgcgcatc agcccgaggt gcgccgatga
    20281 atccggctgc catgcggtgc cagaggactc tcgggtcatc ggatagggac cgagagcgcc
    20341 ggtcatcgca tggccctcgt gctcgtcccc agtcatctgg ggatggtcca tctgcgaatg
    20401 gtccatcggc tcatcggccg gcgggctctg ctgcggcgac ggctgcggag ccggcatgtc
    20461 catcgccggc tggtgctggt gctggtcctg cgccatggca gcggccggga ctgacgccag
    20521 agcgatcgcg ctcgcggcga aataaacgtt cctcttcaca attgatctcc gaaattggga
    20581 ggcgacgctg caggcgccgt ctcccggcat ctgcggctac ttgccgccgt gctcgcgatg
    20641 atcctgcgct ccgggctttg cctggtcgga atgcattgtc ttcatcatct cgtggcactg
    20701 ctgcatcatc ttggccatct gctcgtgttg ctggtggccg gcctggcccg actgctggtg
    20761 ctgcgcgtgc tgggcatgct tcgcctgcgc gtcgggagtt actgcctgag cagctggcgt
    20821 ggttgcggca agcgccgcgg caatgaatgc aaacatctct attctcctga gttcgaatgg
    20881 atcgtgttcg aagtctcagg cgcccgggga ggcggagttg ccatctctaa gaggattcca
    20941 gtcaatttcg tggccggtgc cggcttttcc ggagcgagcg tcaccggccg gatttcgagc
    21001 gggcgcaact cggcggctgg gagcgcggca gagcaggcca tcgtgcactc cgccatgacg
    21061 cctttcgcgt gcccggacga atgatggcct gcatcatggt gcatcgccat ggccgctggc
    21121 ggaacgcggt cattcgccgc ggctgggcca gccattccta aaggcagcat caggactgcg
    21181 agaagaagca gcaatttcat ggcctgcgag cgcatgctcg cacaatatgc aggggaggcg
    21241 ccttgctcaa tcgcgacaat cacttagcca ctccctcgag cccgccaagg atcgggcatt
    21301 cgggccggtc gtcgccgtgg caactttgcg ccagatgctc gagcgaacgc cgcatgtcat
    21361 gaagctcccg ctccttgcgc ttgagctcgg cggcgcgggc gagtgcgagc gccttcactt
    21421 cggcgctggc gcggctgcga tcgttccaca gcgccaggag cttaccgatc tcgtcgaccg
    21481 aaaacccgag gtcgcgggcg cgagcgatga atcgcagcgt gtggacgtcg cgctcgtcat
    21541 agtcgcgata gccggagtcg cggcgcgctg cagtatcgat caagccgatc ttttcataat
    21601 gtcggatcat ccgcggagtg atgcccgagg cggccgccac ctggccgatc ttcatagttt
    21661 ggctcttctc agccgtagcg agttgccgat cacggtgacc gagcttagcg acatcgccgc
    21721 gccggcaacg attggggaca ggaggatctg gaaccagggg tagagtgcgc cggcggcgat
    21781 cggcacgccg gcagcgttga agacgaaggc gaaaaacagg ttctggcgga tgttgcgcat
    21841 cgtcgcccgg ctgagatgcc gcgccctgac gattccgcgc aggtcgcctt tcaccagcgt
    21901 gattgcggcg ctctccatgg cgacgtcggt gccggtgccc attgcaatgc cgacgtcggc
    21961 ggcggcgagc gcgggggcgt cgttgatacc gtctccagcc atcgcgacct tgcggccttc
    22021 gcgcttgagc tgctcgacct tggcctgctt ctggtcagga aggacctcgg ccagaacttc
    22081 atcgatgccg acctttcgcg ccaccgccgc tgcggtacgg ccattgtcgc cagtcatcat
    22141 caccaccgtg atgccgtcac ggtggagctc ggcaatggcg tcggcagcgg tctcctttac
    22201 cggatcggcg accaccagca gtcccgcgga ctggccgtcg atggcaacga acatcgcgcc
    22261 cgagccttcg ccctgatgct ccgccgcgcg ctgctcgagg ccactgacgt ccacgcccgc
    22321 cgcttccatc aacgcggaat tgcccagagc caccttgcgg ccagcaaccg tcccggtgac
    22381 gcctttaccg gtgtgcgatt cgaagtcgct gctggcgggc accttgagtt cgcgctcgtc
    22441 tgcgccctcg acgattgccg cggcaagcgg atgttcgctt ccccgttcga gcgcggcaga
    22501 gagacgaagc acttccgatt cgtcgaaacc ttcggcgagc tcgaccgcga tcaacttcgg
    22561 cttgccgagg gtcagggtgc cggttttgtc gaccaccagc gtatcgacct tctccatcag
    22621 ctccagcgct tcggcattct tgatcagcac cccggcgctc gcgccgcgtc cggtgccgac
    22681 catgatcgac atgggagttg cgaggccgag cgcgcagggg caggcaatga tcagcaccgc
    22741 gatcgcattg acgatggcgt gactaagcgg gggcgcgggg ccgaacaggc tccaggcgac
    22801 gaaggcgagg accgaaacgg caacgacgct cggaacgaac caggccgaga ccttgtcggc
    22861 aaggccctgg atcggcgccc gcgagcgctg agccgcggcg accatccgga cgatctgcga
    22921 cagcatcgtg tcgcgaccga ccctctccgc gcgcatcagc aacgtcccgg tgccgttgac
    22981 ggtcgcgccc gtgatcttct cgtctgccgt cttctcgacc gggacgggtt cgccagagat
    23041 catcgattcg tcgaccgagc tgcgcccttc gaccacgatt ccgtcgaccg gaatcttctc
    23101 gcccggtcgg acccgaagga ggtcgccgac atgcacgtcc gacagaggga tgtcttcttc
    23161 cttgccatcc gtcacccgcc gcgcggtctt cggcgcaagt ccgagcagcg cgcggatcgc
    23221 cttgccggtc gcggcgcggg cacgaagctc cagcacctgt ccgagcagga cgagcgtcgt
    23281 gatgaccgcc gcggcctcga aatagaccgg cacgaatccg cccatcgtgc gcagcgattc
    23341 gggaaaaatc tgcggcgcca gagatgcgac aacgctgtag ccgtaggcga cgccgacacc
    23401 gagccctatc agcgtgaaca tgttgagatt gcgggtcttg aggctcgacc acatgcgctc
    23461 gaagaacggc cagccgcccc acaggacgac cggcgtggtt agcgcgagct ggacccagat
    23521 cgaaactcgc atcggcagca ggtcgagccc gaagagctcc gatcccatca ccagcaccag
    23581 caagggaacc gaaagcgcgg cgctgatcca gaatcgccgg ctcatgtcga tcagttccgg
    23641 gttggcctgc tcctcgaccg tcggctccag cggctcaagc gccattccgc agatcgggca
    23701 gctccccggc acgtcgcgac gcacctccgg gtgcatcggg caggtccaga tggtgccctc
    23761 cgccgactcg gcgagcgcgc ccaaagccgg gtgctcttcc gacgcgccgg gcggattgag
    23821 gtagcggtcg gggtccgcct tgaacctgtc caggcatcgc tcactgcaga aataatagtc
    23881 ggtgtcgccg agcgcgtggc ggtgcttcgc ggttcgcgtg tcgaccttca tcccgcaaac
    23941 gggatcgcga accatcgtcc cgtgctcggc caatcccgct ttgccccggt ggcgatgaga
    24001 gcactcaccc tgctggtggt tgtgctgttt ccgactcgtc atttgcgcct tgtgcacctt
    24061 gacatcatgt caaggtcaac agcgaagtca gccgtcgcgt tccctgaggt agcgcatcag
    24121 ctcggcgagc gtggattcca tctggtcctg catctggccg acaagctcgt tctcgcgcat
    24181 cccgacatgg tccagcggct tagaatagct gtcggaaaag gcggtgaggt cgtcctcgtc
    24241 gaagaccccc ttcgccacca ttttcgcaag gatcaccagc agcccgttgg tattggctat
    24301 tgttccggcg actagcgcct cgtcgaccat cgaaaggcgc tggtcgtcgc cggtctgggt
    24361 atcgctgtct tcgatcgagg ccatcgccgc cagtgtgacg cgattggcga gaagggcaag
    24421 gtcagcactc gcaatatcgg gcgagttggc cccaggcctg cgccttttcc gcgaatggcc
    24481 gtgtgtttgc cgggctggac gacggcaagt cgatcaggct cagccgcgct accccgccga
    24541 gaagctgccg ccccgccttg gccgcagcgg cgccgttgaa ggcgaccgcc tcgaggtgcg
    24601 gaaatccggc gaaataatcg gcgagcggat tgtggccggc atcgcggatc gcctggtcta
    24661 ggcttccgcg gcgggtcgca tgggcgacga catcccacag cccgatgcgg ttcgcggtca
    24721 gccgttcgag ccgctcagca tagcccagcg aatgcaaatc ctcgccgacg acgcttccga
    24781 tgagtcgcca gaagccgttt cgcgggtgcg cgtaatagcg cttcgctgcc agcgaggcgt
    24841 cgccgggaag gctaccgagg acgaagaggc gcgcgtcggg ccgtgcgacg ggcggaagtc
    24901 catgcttgac gatcacgtcc attcatttgc ctttacgcca cgcgccgcta agccgcgcac
    24961 cgtgcagccg agcgacattc gactcgccct cttttcgggc aattacaatt acgtccgaga
    25021 tggggccaac caggcgctga accgcctcgt cgactatctg ttgcgccggg gcgtgcaggt
    25081 ccggatttat tcgccgacgg tcgaacatcc ggcgttcgag cccactgggg acctcgtctc
    25141 gctgccgtcg gcggcaatcc cgcgccggcc cgaatatcgc attcccacgg gaatcccggc
    25201 gcgggtgcgg cgcgaccttt cagctttcga tccgaacatc gtccagatct cgagccccga
    25261 cgtcgccgcg caccgggccg tgagctgggc gaggaagcgc ggaattcccg tcgtcgcgtc
    25321 ggtccacacg cgcttcgaga cctatctcag ctattatcac ctccagctct tcgagccgat
    25381 gcttagggcc gcgctgcggc gtctctaccg ccgctgcgac gcgcttcttg tgcccgccaa
    25441 gtcgaccgcc gccgttctga gggcgcagcg gatgaactcc aacatctaca tgtggagccg
    25501 gggggtcgac cgcgaacagt tcaaccccgg ccggcgcgac atggcctggc ggaggcaagt
    25561 cgggattgcc gacgacgagc ttgccatcgc cttcctcggc cggctcgttc tggaaaaggg
    25621 gctggatgta tttgccgagg cgatcgagcg gcttcgaaag cgcggagtcc cgcatcatcc
    25681 actcgtaatc ggcgacggcc cggcccggtc gtggttcgag caacaaatgc caaacggcat
    25741 tttcctcggc cagcaggtcg gtgacgatct cggacgggcg ctgggcagcg ccgacgtgtt
    25801 cttcaatccc tcgctgaccg agacgttcgg caacgttacc ctcgaggcaa tggcttgcgg
    25861 gctacccgtg gtcgcggcct cggcgaccgg agcgacgagc cttgttcgcg acggcaagac
    25921 cggggtcctt gtcgagcctg gggacgtcga cgccttcgcc gacgcgctcc aggcctatgc
    25981 ccgcgacccc ggcctaaggc gctcgcacgg ccaagcgggg ctggacttcg cccgcaccca
    26041 ggattgggac gagatcaacg cgtccgtcct gcgggtctat gaaacgatcg tcgagcggcg
    26101 ttcgcgccag tctatttgat ccgctcgatc cgctgcgcgg cttcgtcgag gatcgcagcg
    26161 atctcgtgga gaagctcgtc gttgagaccg tccctgccca ctcgatgggt cagcgccgtc
    26221 atcaggttgc ggacggcgcg gccgatcgcc gggccggcat cgtggcgttc ctctggcgca
    26281 agctcctcga gccgctcgat cagctcttcg acttcgtcgg accgctcgtc gagatgcgcg
    26341 cggccgtcgt cggtggcctc gaacaccttc ttgctgtcct tcgacttgcg ctcggcgatg
    26401 tggcccatgt cctcgagcat ggtcagcgtc ggatagatga cgcccgggct cggcgcatat
    26461 tcgccgccgg tcatctcctc gatggcccga ataaggtcgt agccgtggcg cggctcgtcg
    26521 gcgatcagct tcaacaggac cagccggagc tcgcccgatt cgaacatgcg ccgccgtcca
    26581 cggcgcccgc gtccgccgcc gcgtccgccg ggcatgtctc caaaatcgaa gtggaaaggt
    26641 ccccaattgc cccggaaccc gcgcccgctg gcgaacatct gggcgaggtt gccgaagcga
    26701 acgctcgcgc cgtcgtgggg cggctccgga ggcattggcg ggacgggggg aatcgggggc
    26761 atgtcgtcat tgtggcggtg gcggcgatgg tggcggggca cgggcgctct cctttgtaga
    26821 tgcatctcag atatatctta gtaacatctt gtgcaatggc ctgatgcaaa tttcccgccg
    26881 gcttctatga tttcgccgat ggccgatttg tttggcgaac ccgctctgtc caccccgccg
    26941 cacgaagctg cggcgaatgc gccgctcgcc gacaggcttc ggcccaaggc gctgagcgaa
    27001 gttgtcggcc aagagcatct gaccggcccc gaaggcgcaa tcgggcggat ggtcgcggcc
    27061 ggaaaactgg gctcgatgat cctgtggggg ccgcccggga ccggcaagac gagcatcgct
    27121 cggctgctcg ccgatgccgt cggccttcgc ttcgtcgcca tttccgcagt cttttctggg
    27181 gtcgccgact tgaagaagat ttttgccgag gctcggcaga tggcggaggc gggccggcag
    27241 accttgctgt tcgtcgacga ggttcaccgc ttcaatcgat cgcagcagga cggattcctg
    27301 ccctatgtcg aggacggcac cgtcactctc gtgggcgcca cgaccgagaa cccgagcttc
    27361 gagctgaatg cggcgctgct gtcgcgctgc caggtgctga tccttcaccg cctggacgag
    27421 gccgcgctgg gggccctgat cgagcgcgcc gaagcggaaa tcggcgctcc gctgctgctc
    27481 acgcctgaag cccgcgaagc gctgatcgcc tcggccgacg gcgacgggcg gttcctcctc
    27541 aaccaggtcg agaccatctt cgacgtcgag ccgaaggaac cgctcgaccc cgctgcgatg
    27601 gccgccctgc tccatcgccg cgtccccgtc tacgacaagg accgcgaggg gcattacaac
    27661 ctcatctcgg cgcttcacaa aagcctccgc ggctcggatc cgcaggcggc gctttattat
    27721 ctcgcccgga tgctcgtcgc cggcgaggag ccgctctacg tgatccgccg cctggtccgc
    27781 ttcgcttccg aggatatcgg tctcgccgac ccgcaagcgc tggttcagtg cctggctgcc
    27841 aaggacgcct acgatttcct cggctcacct gaaggcgagc tcgcgatcgt ccaggcctgc
    27901 ctctattgcg ctgtcgcgcc caaatcgaac gccgcttacg ccgcccagaa aggcgcctgg
    27961 cggacggcca aggacagcgg ctcggtgatg cctcctgccc acatccttaa cgcgccgacc
    28021 aagctgatga aggacatcgg ctacggcaaa ggctatgcct acgaccatga ggcggaggac
    28081 gccttttccg gtgccgatta ctggcccgag gagttggagc gccaggattt ctacaggccg
    28141 tcggaccgtg gcttcgaagc gaaggtccgc gagcggctcg aattttggga cgagcgtcgc
    28201 agggcgctac agtcggacga ctctaaacag gggagctgat caagcatgta cgagatgggc
    28261 ggagcgaacg gatattggca gggccagctg atgtactggg gccccaaggt cctgatcgcc
    28321 attctgatcc tggtcgcgac gtggattgtc gcgcgcgtgg tcaaatgggc gttgcagaag
    28381 gcgatcgacc ggattccggc gcttcggacg cacacaaccg gaggtcccaa ggaaaccgtt
    28441 ggccaccagc tt
//
LOCUS       DATAKH010000178        13267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_22447,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000178 DATAKH010000000
VERSION     DATAKH010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 13267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13267
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22447"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..176)
                     /locus_tag="VHN55_07340"
     CDS             complement(21..176)
                     /locus_tag="VHN55_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010543346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX2803778.1"
                     /translation="MLLASERGATAVEYGLIAALIVIAMMGALGSLGGGVGGMWTELS
                     DTVQNAM"
     gene            complement(291..1094)
                     /locus_tag="VHN55_07345"
     CDS             complement(291..1094)
                     /locus_tag="VHN55_07345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX2803779.1"
                     /translation="MSSPPELFDRRLRALRRDRAFNSGPVLFLHERAFSDILERVADV
                     NRTFSSALLLGTPDPQWPRRLGELAGQVTAMDPGQRFAHAAGGATVLEEEIDLEPSSF
                     DLIVAAGTLDTVNGLADTLLRLRFLLKPDSLLIGVIPGGDTLLRLRQAMRAADSVSGA
                     ASPHIHPRIEPAGLAQLLGSAGLAMPVVDVDRVSVAYSRLGDLVGDLRGMGATNVLSK
                     RSRVPLSRAALAAAERAFDSGGQTRVTEQFELLHFAAWTPAQATPEAHG"
     gene            1139..1876
                     /locus_tag="VHN55_07350"
     CDS             1139..1876
                     /locus_tag="VHN55_07350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEX2803780.1"
                     /translation="MTLRNAGSRLFRIVLDFALPPRCGGCGTIVEEVDSFCAGCWGKL
                     EFLQGGCSRCGLPLKGTDIDLCGVCLAKPPRLDRIRAAVAYDDISRTIALRLKYGRKV
                     GLARTMSRYMQPLVGELPPEAILVPVPLHRGRLWSRGFNQSAIVARELSRQTGLPVAV
                     DALRRVRPTPSLKGLSKLQRRRTVAGAFQAGKGVELKDRTIVLIDDVLTTGSTANACA
                     RALKRAGAARVDLVSWARVIGPSQLNH"
     gene            1894..2151
                     /gene="grxC"
                     /locus_tag="VHN55_07355"
     CDS             1894..2151
                     /gene="grxC"
                     /locus_tag="VHN55_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEX2803781.1"
                     /translation="MAKVEIYTKTFCGFCWRARDLLDSKGIAYEEYVIDGGGPKREEM
                     IQRAMGRTTVPQIFIEGRHIGGCTDLIALERDGKLNDLLAA"
     gene            2148..2975
                     /locus_tag="VHN55_07360"
     CDS             2148..2975
                     /locus_tag="VHN55_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013833741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEX2803782.1"
                     /translation="MTSIAVFQSRTGIDPAANAKALVSAIEEAARGGAQMLFTPEMSG
                     LLDRDPERARRNVRSEEEDQVLAACREACERAGIWLHLGSIAVAAEGGKFANRGFVID
                     SAGEIRASYDKIHLFDVDLPTGESWRESNVYHGGSESVVVEGTPVGKLGLTICYDLRF
                     PALFERLSEAGAQLISVPAAFTVPTGKAHWEVLLRARAIEAGVFVVAAAQCGSHEDGR
                     ETYGHSLIVDPWGEIIADMGDGLGIAFADINLGRVAEVRQRIPALDHRRPVAEPVTR"
     gene            2972..3379
                     /locus_tag="VHN55_07365"
     CDS             2972..3379
                     /locus_tag="VHN55_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEX2803783.1"
                     /translation="MIVFDLRCQDSGDIFEAWFRSTADYDQQSARGLVQCPVCRSTSI
                     AKAPMAPRVRAKSAGETLPLAQLAALQAKMLEKSEWVGDRFADEARSIHLGESDVRAV
                     HGSATAAEAKSLIDDGVPVAPLPLPLLPPNQVN"
     gene            3414..3490
                     /locus_tag="VHN55_07370"
     tRNA            3414..3490
                     /locus_tag="VHN55_07370"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3448..3450,aa:Arg,seq:cct)
     gene            3511..3771
                     /locus_tag="VHN55_07375"
     CDS             3511..3771
                     /locus_tag="VHN55_07375"
                     /inference="COORDINATES: protein motif:HMM:NF040386.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6356 family protein"
                     /protein_id="HEX2803784.1"
                     /translation="MRATRHRNFVAHLFTEHPQSLGMSWAKHGGGAAKIGFELIATGA
                     ACLVHALIPGFFAETTSKTISRLNSEIHERGNSRARHAGGRR"
     gene            3768..4379
                     /gene="folE"
                     /locus_tag="VHN55_07380"
     CDS             3768..4379
                     /gene="folE"
                     /locus_tag="VHN55_07380"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEX2803785.1"
                     /translation="MSSSPDDGDLHDAPPKLPVPDDVKDAVKTLIRWAGDDPDREGLL
                     ETPERVARAWAEYAAGYGHDPAAHLSRTFHEVGGYDEIVLLKDIPFQSHCEHHMAPII
                     GKAAIAYLPRDKVVGISKLARVLHGYARRLQVQERLTAQVADCIWTHLEPKAVAVVIE
                     ASHSCMTARGVNTPGVMMTTSRMMGTFRSDERSRREVLALMGY"
     gene            4411..4656
                     /locus_tag="VHN55_07385"
                     /pseudo
     CDS             4411..4656
                     /locus_tag="VHN55_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013041315.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4700..5494
                     /locus_tag="VHN55_07390"
     CDS             4700..5494
                     /locus_tag="VHN55_07390"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEX2803786.1"
                     /translation="MRQYLDLLRTILDQGVPQSDRTGTGTLTYFGAQMRFDLQKGFPL
                     LTTKKLHLRSIIVELLWFLRGDTNIRWLKDRNVRIWDEWADANGDLGPVYGKQWRDWE
                     SADGRQIDQITNLVELIKRDPSSRRQIVTAWNPGEIDRMALAPCHCLFQTQVAAGRLN
                     LQLYQRSADMFLGVPFNIASYSLLTHMLARECGLQPGVFVWTGGDCHIYSNHMEQVQL
                     QLSREPRPLPQLVLKDRGQGIDGFEPEDFAFENYDPHPHISAPVAV"
     gene            complement(5491..6657)
                     /locus_tag="VHN55_07395"
     CDS             complement(5491..6657)
                     /locus_tag="VHN55_07395"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX2803787.1"
                     /translation="MNVSPISAASAQPAPAATVFDRDAWKADFERVKLGLAQGYANLD
                     WQIDRRGFNLKRASQQITAMLDRTNSDAEAAVVLAKLVDAFKDPHLQLQIGPPPERAT
                     LLPLTSSVDGPAAAQDRCSAAHYSAGNADTRLAYVKSPEWKQTSEGPFLSGVLGDIGI
                     LRIPAFGEDRYLDACNKVAKPGMEGRALQLATRAELNRELAAQIAALRKAGARKLIID
                     VTGNGGGTEWSNEVAAMLATGTLKRPAPRLAGPTCDRSSMWDGKRPCPIYGKPAEIEE
                     MEGTGIWNGPLAVLTDRRSASATEELVTWLKDNGKAVIAGERTHGSGCGYVDGGYAIA
                     LKAANLHILVPNCSRYTSDGINEIEGIAPDVPIDWGTVEAGEIAGLLSGLFEPR"
     gene            6813..6956
                     /locus_tag="VHN55_07400"
     CDS             6813..6956
                     /locus_tag="VHN55_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010238604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Entericidin EcnA/B family protein"
                     /protein_id="HEX2803788.1"
                     /translation="MLHKIVTVVIVGAALATTACNTVRGAAADVNSVANCTENALDGT
                     GNC"
     gene            7023..7166
                     /locus_tag="VHN55_07405"
     CDS             7023..7166
                     /locus_tag="VHN55_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007163464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entericidin EcnA/B family protein"
                     /protein_id="HEX2803789.1"
                     /translation="MVRKLVIAGTILASLAVAACNTVRGAAADVNSVANCTENTINTG
                     RCK"
     gene            complement(7248..11540)
                     /gene="rpoC"
                     /locus_tag="VHN55_07410"
     CDS             complement(7248..11540)
                     /gene="rpoC"
                     /locus_tag="VHN55_07410"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEX2803790.1"
                     /translation="MNELTPFANPVAKPETFDHIRIGIASPDKIRSWSFGEIKKPETI
                     NYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIVCEKCGVEVTVSKVRRERM
                     GHIELAAPVAHIWFLKSLPSRIGLLLDIQLKQLERVLYFESYVVLEPGLTPLEKHQLL
                     TEDELLEAQDEHGEDAFSAGIGAEAVKQMLMDLDLEGEKETLLKELAETKSELKPKKI
                     IKRLKVVESFLESGNRPEWMILEVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINR
                     NNRLKRLMELRAPDIIVRNEKRMLQEAVDALFDNGRRGRTITGANKRPLKSLSDMLKG
                     KQGRFRQNLLGKRVDYSARSVIVVGPELKLNQCGLPKKIALELYQPFIIRKLKEHGLA
                     DTIKSAKKMLERKEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHP
                     LVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDMVLG
                     LYYLSLEKEGEPGEGMMLSDMAEVHQALAAGAVTLHSKIVSRVPQTDEDGNTYMKRFE
                     TTAGRMLLGETLPKTHKVPFETVNRLLTKKEIGDVIDIVYRHTGQKETVLFADAIMQL
                     GFRHAFAAGISFGKDDMVIPAEKEKLVEETRALVKDYEQQYQDGLITQQEKYNKVIDA
                     WSRCGDRVATEMMNEISATPILENGRQADVNSIYMMAHSGARGSQAQIKQLAGMRGLM
                     AKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVSQ
                     DCVIVEEDCGTDRALEMRAIVQGGTVIASLADRVLGRTTAEDIVDPKSGDVVIPEGSL
                     LDEPMVAQIEEIGIQGMKIRSPLVCASKQGVCGKCYGRDLARGTPVNIGEAVGVIAAQ
                     SIGEPGTQLTMRTFHIGGAAQLNEQSNLEAPVDGTIEFRDMPTIVDPRGNHRSLSRSG
                     EIAIVDMDGRELSTHRVPYGAHLLCESGHIVSRGDRIAEWDPAFSPVITETGGTVKYQ
                     DLIEQRTLTEQIDESTGITQRVVTDDTGGRSKKDALHPRLTLAGEGKKAATEAGVYRL
                     PAGAIIAVDDGQKVEAGEVLARLPREAARTRDITGGLPRVAELFEARKPKENAIIAKA
                     TGKVTFLRDYKAKRKIAIVPEDGSEPVEYLVPKAKLIEVQEGDYVKRGDNLVGGSPDP
                     HDILEVLGVEALAEYLVSEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITEGGDTTLL
                     AGEQVDREEMDAINAKLEKKQKKAEGKPVLLGITKASLQTRSFISAASFQETTRVLTE
                     ASVQGKIDTLNGLKENVIVGRLIPAGTGAGMGRLRVTASSRDAALRAQQRKLQESLIA
                     ANTAAEEHAAELAQGEEAAIHADPLAEVAPSGHGSDADAGDYLQTEEAKTEK"
     gene            complement(11602..>13267)
                     /locus_tag="VHN55_07415"
     CDS             complement(11602..>13267)
                     /locus_tag="VHN55_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEX2803791.1"
                     /translation="SERIVRDDIFTSIHLEEFEVMARDTKLGPEDITRDIPNVGEEAL
                     RNLDEAGIVYIGAEVEPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRL
                     PPGVSGTVVEVRVFNRHGIDIDDRTRAIQTEEKERLKKDADDERAILNRATFARLKEM
                     LVGQTATAAPKGIKKGAKVDEAMLESVQPHEWWKIAVKDDKRQSDVEALKTQYEEAAD
                     AIRRRFEDRVQKIEAGDELAPGVLKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILP
                     SEDMPFLEDGTPVDIVLNPLGVPSRMNVGQIFETHLGWAARGLGQQIQQMLEGMHERG
                     KGLAGKDVKEVRAKLKDIYGKHYAKEIDARGDEELMELASALTRGIPMGTPVFDGARE
                     SDVTEMLDMAGLDHSGQVTLYDGRTGNPFDRKVTVGYIYMLKLHHLVDDKIHARSIGP
                     YSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVIGRTKVYEAI
                     VKGDDTFEAGIPESFNVLVKEMRSLGLNVELDSVESDEEPPALAAE"
BASE COUNT         2203 a         4240 c         4284 g         2540 t
ORIGIN      
        1 atggtgcgcg gcgcggctga ttacatcgcg ttctggacgg tatcgctcaa ttcggtccac
       61 attccgccga cgccgccgcc gagactgcca agcgcaccca tcatcgcaat gacgatcagc
      121 gcggcaatca agccatattc gacagccgtc gctcctcgct cgctggcgag cagcatgcgc
      181 aaggtcttcg ggatagcatc cacgccatcc tcctctggtc cacgtccaca gctggcagga
      241 ataatgacgg caggttaaca atatttgccg gaggcgcggt taacgccgcc tcatccatgt
      301 gcttccggcg ttgcttgggc cggggtccag gcggcgaaat gaaggagttc gaactgctcc
      361 gtcacccgcg tctggccgcc actgtcgaac gcccgttccg cagctgccag cgcggcgcgg
      421 ctcagcggca cgcgcgagcg tttcgaaagg acgttcgtcg ctcccatgcc gcgcaggtcg
      481 ccgacaagat cgccaaggcg gctgtaggcg accgaaaccc tgtccacgtc tacaactggc
      541 atagccaagc cggcggagcc gagcagttgc gcaaggcccg ccggctcgat gcgcgggtgg
      601 atgtgcgggc tcgcggcgcc cgaaaccgag tcggcggcgc gcatcgcttg cctcagccgc
      661 agcagcgtgt cgccgcctgg aatgactcct atcaaaagcg aatcgggctt cagcaggaat
      721 cggagccgaa gcagtgtgtc ggcaaggccg ttgacggtat cgagcgtgcc cgcggctaca
      781 atgagatcga agctggatgg ctcaaggtcg atttcttctt cgaggacagt cgccccgccc
      841 gccgcgtgag cgaagcgctg accggggtcc attgccgtca cttgcccggc aagctcgcca
      901 agccggcgcg gccattgcgg atcgggagtg ccaaggagga gcgccgagga aaatgtccga
      961 ttcacgtcgg cgacgcgctc gagaatgtcg gaaaaggcgc gctcatggag gaacagcacg
     1021 ggcccgctgt tgaacgctcg gtcgcgccgg agcgcgcgaa ggcgcctatc gaaaagctcg
     1081 ggaggggaag acattgggcc gcttgtgcgc tggcctgccc tgggcgacaa gggagtcaat
     1141 gacgctcagg aatgcgggct cccgcctgtt ccgaattgtg ctcgatttcg ctctgccgcc
     1201 tcgttgtggc ggctgcggga caatcgtcga ggaggtcgac agcttctgcg ctggctgctg
     1261 gggcaagctc gagttcctgc aaggagggtg ctcgcgatgc gggctcccgc tcaaggggac
     1321 cgacatcgac ttgtgcggag tctgccttgc gaagccgccg cgccttgacc ggattcgggc
     1381 ggcggttgcc tatgacgata tcagccggac gattgccctt cgcctgaaat acgggcgcaa
     1441 ggtcggcctc gcgcggacga tgtcgcgcta catgcagcct ctggtcggcg aattaccgcc
     1501 cgaagcgatc ctggttccag tgccgcttca tcgcgggcgg ctgtggagcc ggggcttcaa
     1561 ccagtcggcg atcgtcgccc gcgagctgtc gcggcagacg gggctgccgg tggccgttga
     1621 cgcgctcagg agggtgcgtc cgaccccgtc gctgaagggc ctcagcaagc tccagcggcg
     1681 gcggaccgtc gccggtgcgt tccaggccgg gaaaggcgtg gagctgaaag atcggaccat
     1741 cgttctcatc gacgacgtgc tgacgacggg aagcacggcc aacgcctgcg cccgcgcctt
     1801 gaagcgggcg ggcgcggctc gggtggacct ggtcagctgg gcgagggtaa tcggtccgtc
     1861 gcaactcaat cactgacgag gtgttcgact ttggtggcaa aggttgaaat ctacaccaag
     1921 acgttctgcg gattttgctg gcgcgcccgc gacctcctcg actccaaggg cattgcctac
     1981 gaggaatatg tgatcgacgg cggcgggcca aagcgcgagg agatgatcca gcgcgccatg
     2041 gggcggacga cggtgccgca gattttcatc gaaggtcgcc atatcggcgg atgcaccgac
     2101 ctcatcgccc tcgagcgcga cggcaagctc aacgacctgc ttgcggcatg acgagcatcg
     2161 ccgttttcca gtcgcgcacc ggcatcgacc ccgcggccaa cgcgaaggcg ctggtgagcg
     2221 ccatcgaaga ggcggcgaga ggcggcgctc agatgctctt caccccggag atgtcgggcc
     2281 ttctcgaccg cgacccggag cgggctcggc ggaacgtgcg ttcagaggag gaggaccagg
     2341 tgctcgccgc ttgccgagaa gcctgcgagc gcgccggcat ctggctccat ctgggctcga
     2401 tcgccgttgc ggcggaaggc ggcaagttcg ccaaccgcgg tttcgtcatc gattccgccg
     2461 gtgagatccg cgccagctac gacaagatcc atctgttcga cgtcgacttg ccgaccgggg
     2521 agagctggcg cgagtccaat gtctatcatg gcggttctga atcggtcgtg gtggagggga
     2581 cgccggtggg aaagctcggc ctcaccatct gctacgacct tcgcttcccg gcattgttcg
     2641 agcgcctgtc ggaagccggc gcgcagctca tctccgtccc cgccgccttc acggttccga
     2701 caggcaaggc ccattgggaa gtcctcctcc gtgcccgagc gatcgaggcc ggcgtgttcg
     2761 tcgtcgccgc cgcccagtgc gggagtcacg aggacgggcg cgagacctac ggccactcct
     2821 tgattgtcga cccgtggggg gagataattg ccgacatggg cgacgggctc ggaattgcgt
     2881 tcgcggacat caatctcggc agggtcgccg aggtccgaca gcgaatcccg gcgctcgatc
     2941 accgccgccc cgttgccgag ccggtgacga gatgatcgtc ttcgaccttc gctgccaaga
     3001 tagcggcgac atattcgagg cctggttccg ctccaccgcg gactatgacc agcaaagcgc
     3061 gcgagggctc gtccagtgcc cggtgtgccg ttcgaccagc atcgccaaag cgccgatggc
     3121 gccgcgagtc cgggcgaagt cggcaggcga gacactaccg ctcgcacaac tggcggcact
     3181 gcaggcgaaa atgctcgaga aatcggaatg ggtcggcgac cgcttcgccg acgaggcgcg
     3241 ttcgatccat ctcggcgaat ccgatgttcg ggcagttcac ggaagcgcga ccgcggccga
     3301 ggcgaagtcg ctgatcgacg acggtgtgcc ggtcgcccca ctcccgcttc ccctccttcc
     3361 gccgaaccaa gtcaattgaa gaagcgcgcc ttcgtcccta tccaaggcag gccgaccccg
     3421 tagctcagca ggatagagca tcagattcct aatctgaggg ccacaggttc gaatcctgtc
     3481 ggggtcgcca cacttttttg gaggagcgtc atgcgcgcca cccggcatcg aaatttcgtc
     3541 gctcacctgt tcaccgaaca tccccaaagc ctcggcatga gctgggcgaa gcatggcggc
     3601 ggagctgcga agatcgggtt cgagctgatt gcgacgggcg cggcgtgcct cgtccacgcg
     3661 ctcattccag gcttcttcgc cgagacgacg agcaagacga tttctcggct caattcggaa
     3721 atccacgaac gcgggaattc gcgtgcccgt cacgcgggag ggcggcgatg agctctagcc
     3781 ccgacgatgg cgaccttcac gacgcgccgc cgaagctgcc cgtcccggac gatgtgaagg
     3841 acgcggtcaa gacgctgatc cgctgggcgg gtgacgatcc cgaccgcgaa gggcttctgg
     3901 agaccccgga gcgcgtggcg cgtgcctggg cggaatatgc ggccggctat gggcacgacc
     3961 ccgcggcaca cctcagccgc accttccatg aagtcggtgg ttatgacgaa atcgtgctcc
     4021 tcaaggacat cccgttccag tcgcattgcg agcatcacat ggcgccgatc atcggcaagg
     4081 cggcgatcgc ctacctcccc cgggacaagg tggtcggcat cagcaagctg gcgcgggttc
     4141 tccacggcta tgcgcggcga ctgcaggtgc aggagcggct gaccgcgcag gtcgccgact
     4201 gcatctggac tcatctcgag cccaaggccg tcgcggtcgt gatcgaggcc agccactcgt
     4261 gcatgacggc gcgcggtgtg aacactccgg gcgtgatgat gaccaccagc cggatgatgg
     4321 gcaccttccg ctccgacgag cgaagccgcc gcgaagttct cgccctgatg ggctattgac
     4381 acccaaaggc gcagtgcgcg ttttcgtcgc atggcaaagg cgaagcgcaa gcaaaagctg
     4441 aaggtctatt gcacgccggc gggcttccac gacgtgctgg tcgccgcccc aagccagaag
     4501 gcagcgctcg aagcgtgggg ggcggactcc aacctgttcg cgcgcggcat tgccgagctc
     4561 gttaccgatc caaagcttat ggcggagccc ctcgagagac ccggcgaggt cgtgaaaata
     4621 ccacgcggga ccaagcgcga gcacctcgcc gctctcaagg acggttgagt ttcatccagc
     4681 cgtaactagg gtcgctggaa tgcgccaata tctcgatctg ctgcggacca ttctcgatca
     4741 aggcgtgccg cagtcggacc gcaccggtac cggaaccctg acatatttcg gagcgcagat
     4801 gcgcttcgac ctgcaaaagg gctttccgct gctgaccacg aaaaagctcc acctgcgctc
     4861 gatcatcgtc gagctgctgt ggttcctccg cggcgacacc aacatccgct ggctcaaaga
     4921 ccgcaacgtc cgcatctggg acgaatgggc ggacgcgaat ggcgacctgg gccctgtcta
     4981 cggcaagcag tggcgcgatt gggagagcgc cgacggccgc cagatcgacc aaatcacgaa
     5041 cctggtcgag ctcatcaaac gcgacccgtc gtcgcgccgc cagatcgtga ccgcgtggaa
     5101 tcccggcgag atcgacagga tggcactggc gccttgtcac tgccttttcc agactcaggt
     5161 cgctgccgga cggctcaacc tgcagctcta ccagcgcagc gccgacatgt tcctgggggt
     5221 gccatttaac atcgccagct attcgcttct cacgcacatg ctggcgcgcg agtgcgggct
     5281 tcagccgggc gtattcgttt ggaccggcgg cgattgccac atctattcca atcacatgga
     5341 gcaggtgcag ctccagctga gccgcgagcc gcgcccgctt ccccagctgg tgttaaaaga
     5401 ccgcgggcag gggatcgacg ggttcgagcc cgaagatttt gcgttcgaga attacgatcc
     5461 gcacccgcac atttccgcgc ccgtcgcggt ctagcgcggc tcgaaaagcc cgctgagcag
     5521 gccagcaatc tcccccgcct caaccgttcc ccagtcgatc gggacgtctg gcgcgatccc
     5581 ctcgatctca ttgattccgt cgctcgtgta gcggctgcag ttgggtacca agatgtggag
     5641 gttcgccgcc ttgagcgcga tggcgtagcc gccatcgaca tagccgcatc ccgagccgtg
     5701 cgtgcgctcg ccggcgatca ccgccttgcc attgtccttg agccaggtga ccagctcctc
     5761 ggtcgccgaa gccgagcggc ggtcggtgag cacggcgagc ggaccgttcc aaatgcccgt
     5821 gccctccatt tcttcgattt ccgcgggttt gccgtagatc gggcaggggc gctttccatc
     5881 ccacatggag gagcggtcgc aagtcggtcc ggccagcctc ggtgccggtc gcttgagcgt
     5941 gccggtcgcc agcatggctg cgacttcgtt gctccattcg gtgccgccgc cgttgcccgt
     6001 cacgtcgata atcagctttc gcgcacctgc tttccgcagc gcggcgattt gggcggcgag
     6061 ttcgcggttc agctctgcgc gggtggcgag ctggagcgcg cggccctcca tcccgggctt
     6121 ggcgaccttg ttgcaggcat cgagatatcg gtcttcgccg aacgcgggta tgcgaaggat
     6181 gccaatgtcg ccgagcaccc cggaaaggaa cggcccctcg gaagtctgct tccattcggg
     6241 cgatttcaca taggccagcc gggtatcggc gttgccggcc gaataatgag ctgccgagca
     6301 gcggtcctgg gcggccgccg ggccgtcaac gctgctcgtc agcggcagaa gtgtcgccct
     6361 ttccgggggc gggccgatct gcagctgaag gtgcggatcc ttgaacgcgt caaccagctt
     6421 ggcgagcacc accgccgctt cggcatcgct gtttgtccga tcgagcatcg ccgtgatttg
     6481 ctgcgacgct cgcttcaggt tgaaaccgcg gcggtcgatt tgccaatcga gattggcata
     6541 accctgggca agcccaagct tcacgcgttc gaaatccgcc ttccacgcat cgcggtcgaa
     6601 gactgttgcg gctggtgcgg gctgcgccga agcggcggaa ataggtgaga cgttcataac
     6661 tgcggcaaga acaccgagag caatgtgtcg tagagtcata acacgccaat acacattggc
     6721 cggcgcaatg caagttccgg ccctggagcc gctttccttt ggacattctt gctggaagct
     6781 gcgttcctgc tcgcaccagt aggagaacat cgatgcttca caagatcgtc acagtcgtga
     6841 ttgtcggcgc cgccctcgcg acgactgcgt gcaacacggt gcgcggcgct gctgcggacg
     6901 tgaactctgt tgcgaattgc accgagaacg cgttggacgg caccggtaac tgctaacaag
     6961 tctggacaaa cgccggctta gccagccatt gttgttccac aggggtaaac ggagggacga
     7021 ccatggttcg gaaactggtg attgccggca cgattctcgc cagcctcgcc gttgccgcgt
     7081 gcaacacggt gcgcggcgct gctgcggacg taaactcggt cgcgaactgc accgagaaca
     7141 cgatcaacac cggccgctgc aaataagcga ccgctaagca aaaagaaggc cccgccggct
     7201 tcatgccgac ggggcctttt ttcttgggct gccatggcag ccgcgattta cttttccgtc
     7261 ttggcctctt ccgtctgcag gtaatcaccc gcatcggcgt ccgagccatg cccggacgga
     7321 gctacttccg cgagcggatc ggcatggatg gccgcttcct cgccctgcgc aagctcggcc
     7381 gcatgctcct cggccgcggt gttcgctgcg atcagcgact cctgcagctt tcgctgctgc
     7441 gcccgaagcg cagcgtcgcg ggacgatgcg gtgacccgca ggcgtcccat tcccgcgccg
     7501 gtgccggctg ggatgagccg gccgacgatc acattctcct tgaggccgtt gagcgtgtcg
     7561 atcttgccct ggaccgaagc ttcggtgagg actcgggtcg tctcctggaa cgacgccgcc
     7621 gagatgaagc tgcgggtctg aagcgacgcc ttggtgatgc ccaggagcac cggcttgcct
     7681 tccgccttct tctgcttctt ctcgagtttg gcgttgatcg cgtccatctc ctcgcggtcg
     7741 acctgctcgc ccgcaagcag agtggtgtcg ccgccttcgg tgatctcgac cttctggagc
     7801 atctggcgaa cgatcacctc gatgtgcttg tcgttgatct tcacgccctg gagccggtag
     7861 acctcctgga tctcgctgac gagatattcg gccagcgctt ccacgccgag aacttcaagg
     7921 atgtcgtgcg gatcgggtga gccgccgacg agattgtcgc cgcgcttcac ataatcgcct
     7981 tcctggacct cgatcagctt ggccttgggc accagatatt cgaccggctc gctgccgtcc
     8041 tccggaacga tcgcgatttt ccgctttgcc ttgtagtcgc gaaggaaggt caccttgccg
     8101 gtcgcctttg cgatgatcgc attttccttc ggcttgcgcg cttcgaacag ctcggcgacg
     8161 cgtggcagac cgccggtgat gtcacgggtc cgggcagctt cacggggcag gcgggctagg
     8221 acctcgccgg cctcgacctt ctggccgtcg tcgactgcga tgatcgctcc ggccggaagc
     8281 cggtaaacgc ctgcttcggt ggccgccttc ttgccttcac cggcaagggt caggcgcggg
     8341 tggagggcgt ccttcttcga gcgtccgccg gtgtcgtcgg tgaccactcg ctgggtgata
     8401 ccggtcgatt catcgatctg ctcggtcagc gtacgctgct cgatcaggtc ctggtattta
     8461 acggtaccgc cggtttccgt gatgaccggg ctgaaggccg gatcccattc ggcaatgcgg
     8521 tcgccgcgac tgacgatatg gccgctctcg cacagcaaat gcgcgccgta cgggactcgg
     8581 tgggtcgaaa gctcgcgtcc gtccatgtcg acgatggcga tctcgccgga acgcgacagc
     8641 gaccggtgat tgccgcgagg gtcgacgatc gtcggcatgt cgcggaattc gatggtgccg
     8701 tcgaccggtg cctcgaggtt cgactgctcg ttgagctggg cggcgccgcc gatgtggaag
     8761 gtccgcatcg tcagctgcgt gccgggctcg ccgatcgact gggcggcgat gaccccgacg
     8821 gcctcgccga tgttgaccgg cgttccgcgg gcaaggtcgc gcccgtagca cttgccgcac
     8881 acgccctgct tggacgcgca gaccaaaggc gagcggatct tcatgccctg gatcccgatc
     8941 tcctcgatct gggcgaccat cggctcgtcg agaagcgacc cttccgggat caccacgtcg
     9001 ccgctcttgg gatcgacgat gtcctccgcc gtggttcggc cgaggaccct gtcggcgagc
     9061 gacgcgatga ccgtgccgcc ctgcacgatc gcgcgcattt caagcgcccg gtcggtgccg
     9121 caatcctcct cgactatgac acaatcctgg ctgacgtcga cgagacggcg ggtcaggtag
     9181 cccgagttcg ccgtctttag cgccgtgtcg gccaggccct ttcgggcacc gtgggtcgag
     9241 ttgaaatatt caaggacggt caggccttcc ttgaagttcg agatgatcgg agtctcgatg
     9301 atctcgcccg acggtttggc catcagcccg cgcattccgg caagctgctt gatctgcgcc
     9361 tggctgccac gagcgcccga gtgggccatc atgtagatcg agttgacgtc agcctgtcgg
     9421 ccattctcca ggattggagt ggccgagatc tcgttcatca tctcggtcgc aacccggtcg
     9481 ccgcaacgcg accaggcatc gatcaccttg ttgtactttt cctgctgggt gatcaggccg
     9541 tcctggtact gctgctcata gtccttcacg agcgcgcgag tctcctcgac cagcttctcc
     9601 ttctcggcag gaatgaccat gtcgtccttg ccgaatgaga ttccggcggc gaacgcgtgg
     9661 cggaagccga gctgcatgat cgcgtcggcg aacagcaccg tctccttctg gccggtgtgg
     9721 cgatagacga tgtcgatgac gtcgccgatc tccttcttgg tcagcaggcg gttgaccgtc
     9781 tcgaacggga ccttgtgcgt cttcggcagg gtctcgccca agagcatccg gccggcggtc
     9841 gtctcgaacc gcttcatgta ggtgttgccg tcctcgtccg tctgcgggac gcggctgacg
     9901 atcttcgagt ggagcgtgac cgcaccggcg gcgagcgcct ggtgaacctc ggccatgtcg
     9961 gaaagcatca tgccctcgcc cggctcaccc tccttctcga ggctgaggta gtagaggcca
    10021 agcaccatgt cctgcgacgg cacgatgatc ggcttgccgt tggcgggcga caggatgttg
    10081 ttggtgctca tcatcagaac gcgcgcttcc agctgggcct cgaggctcag cgggacgtga
    10141 acggccatct ggtcgccgtc gaagtcggcg ttgaaggcgg cgcagaccag cgggtggagc
    10201 tggatcgcct tgccctcgat cagcaccggc tcgaacgcct ggatgcccaa gcggtggaga
    10261 gtcggcgcgc ggttgagcag gaccgggtgc tcgcgaatga cttcgtcgag gatgtcccag
    10321 acttccttgc gctccagcat cttcttggcg gacttgatgg tgtcggccag gccgtgctcc
    10381 ttgagcttgc ggatgatgaa gggctggtag agctcgaggg cgatcttctt gggcaggccg
    10441 cactggttga gcttgagctc gggcccgacg acgatgaccg accgcgcgga gtagtccacg
    10501 cgcttgccga gcaggttctg ccggaaccgg ccctgcttgc ccttgagcat gtcggacagc
    10561 gacttcagcg ggcgcttgtt ggcgccggtg atggtgcggc cgcggcggcc gttgtcgaac
    10621 agggcgtcga cagcttcctg cagcatccgc ttctcgttgc ggacgatgat gtccggcgcg
    10681 cgaagctcca tcagcctctt caggcggttg ttgcggttga tgacgcggcg atagagatcg
    10741 ttgaggtccg acgtcgcgaa gcggccgccg tcgagcggga ccagcggacg aagctcgggc
    10801 gggatcaccg gaacgacttc caggatcatc cactcgggcc ggttgcccga ttcgaggaag
    10861 ctctcgacga ccttgagccg cttgatgatc ttcttgggct tcagctcgga cttggtctcg
    10921 gccagttcct tgagaagcgt ttccttctcg ccctcgaggt cgagatccat cagcatctgc
    10981 ttgaccgcct cggcgccgat cccggccgaa aaggcgtctt cgccatgctc gtcctgcgcc
    11041 tcgagaagct cgtcctcggt cagcagctgg tgcttttcga gcggggtcag gcccggctcg
    11101 aggacgacgt agctttcgaa atagagcacg cgctccagct gcttgagctg gatgtcgagc
    11161 agaaggccga tccggctcgg aaggctcttc aggaaccaga tgtgggcgac cggggcggca
    11221 agctcgatat ggcccatgcg ctcgcggcga accttggaga ccgtaacctc gactccgcac
    11281 ttctcgcaga cgatgccctt gtacttcatc cgcttgtact tgccgcacaa gcattcgtag
    11341 tccttgatcg gtccgaagat gcgcgcgcag aacaggccgt cacgctcggg cttgaacgtg
    11401 cggtaattga tcgtctctgg cttcttgatc tcgccgaaag accagctgcg gatcttgtcc
    11461 ggcgacgcga tcccgatgcg aatgtgatcg aacgtctccg gctttgcgac cgggtttgcg
    11521 aagggggtaa gttcgttcat gtcttctctt cctcactccc ctcccgcggg tgcgggaggg
    11581 gcagggtggg tctgctaagg cttattcggc cgcgagcgcc ggcggctcct cgtcgctttc
    11641 gacgctgtcg agctcgacgt tgaggccaag gctgcgcatt tccttcacga gcacgttgaa
    11701 gctctccgga attccggcct cgaacgtgtc gtcgcccttg acgatcgcct cgtagacctt
    11761 ggttcggccg atcacgtcgt ccgacttgac cgtcagcatc tcctggagcg tgtaggcggc
    11821 gccgtaggcc tgcagcgccc acacctccat ctcgccgaag cgctggccgc caaattgcgc
    11881 ctttccgcca agcggctgct gggtgacgag gctgtacggg ccgatcgagc gcgcgtggat
    11941 cttgtcgtcc acgaggtggt gaagcttgag catgtagatg tagcccaccg tcaccttgcg
    12001 gtcgaaggga ttgccggtgc ggccgtcata gagcgtcacc tggcccgaat ggtcgagccc
    12061 ggccatgtcg agcatctcgg tgacgtccga ctcgcgggcg ccgtcgaaca ccggcgtgcc
    12121 catcgggatt ccccgggtca gggccgaagc aagctccatc aactcctcgt cgccgcgggc
    12181 gtcgatctcc ttggcataat gcttgccgta gatgtccttc agcttggcgc ggacctcctt
    12241 aacgtccttg ccggcaagcc ccttgccgcg ctcgtgcatt ccttcgagca tctgttggat
    12301 ctgctggccg aggccgcggg cggcccagcc gagatgggtc tcgaagatct ggccgacgtt
    12361 catacggctc ggaacgccga gcggattgag gacgatgtcc acaggagtcc cgtcctcgag
    12421 gaacggcata tcctcgcttg gaagtatccg gctgatcacg cccttgttgc cgtggcgtcc
    12481 ggccatcttg tcgccgggct ggagcttgcg cttcaccgcg acgaaaacct tgaccatctt
    12541 gagcacgccg ggagcgagct cgtcgccggc ctcgatcttc tgaacccggt cctcgaagcg
    12601 gcggcgaatt gcgtcagccg cttcttcgta ctgggtcttc agggcctcga cgtccgactg
    12661 gcgcttgtcg tccttgacgg cgatcttcca ccattcgtga ggctgcacgc tttcgagcat
    12721 cgcctcgtcg accttggcgc ctttcttgat gcccttggga gccgcggtcg ccgtctggcc
    12781 gaccagcatt tccttgaggc gcgcgaaggt cgcccggttc aggatcgccc gctcgtcgtc
    12841 ggcgtccttc ttgagccgct ccttctcttc ggtctggatc gcgcgggtac ggtcgtcgat
    12901 gtcgattccg tggcggttga acacgcgcac ttcgacgaca gtgccggaaa cgccgggcgg
    12961 aagccgaagc gaggtgtcgc ggacgtccga cgccttttcg ccgaagatcg cccggagcag
    13021 cttttcctcc ggagtcatcg ggctttcgcc cttcggagtg atcttgccga ccaggatgtc
    13081 gcccggctcg acctcggcgc cgatgtagac gattccggcc tcgtcgaggt tgcgaagcgc
    13141 ttcctcgccg acgttgggga tgtcgcgggt gatgtcctcg gggcccagct tggtgtcgcg
    13201 ggccatgacc tcgaattcct cgaggtggat cgaggtgaag atgtcgtcgc gcacgatgcg
    13261 ctcggaa
//
LOCUS       DATAKH010000179         3646 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_38684,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000179 DATAKH010000000
VERSION     DATAKH010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38684"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VHN55_07420"
     CDS             <1..869
                     /locus_tag="VHN55_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEX2803792.1"
                     /translation="GIGAALLLNGNAYVQLLTNSDEKPAELVMLRPERVSVETDSQGW
                     PIGYKYRAGGKSVRFARADGLGRNLVAHIRSLHPRDDHYGMGCLDAAIAAASVHNRAS
                     RWNKGLLDNAARPSGALTYEPADGALLSAEQFARLKSELEAEFSGTQNAGRPLLLEGG
                     LKWQALSLTPADMDFVALKEGAARDIALAFGVPPVLVGLPGDATYANAREAGRALYRQ
                     TILPMAGRILGALSAMLGDWMGPVKLAVDTDQISELAEDRAKLWEQVGAASFLSDAEK
                     RELLGFAAEKAE"
     gene            866..1177
                     /locus_tag="VHN55_07425"
     CDS             866..1177
                     /locus_tag="VHN55_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6127 family protein"
                     /protein_id="HEX2803793.1"
                     /translation="MTNDALLATLVAQADGKVIDVVTLRALVEESSQSGARRALGALG
                     LDDEKARGDMDELRQLLSAWRDAKRTAWRAVVTWLVRIGLAAVLVGIAVRLRLTDLIS
                     G"
     gene            1198..1551
                     /locus_tag="VHN55_07430"
     CDS             1198..1551
                     /locus_tag="VHN55_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0019082 - viral protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEX2803794.1"
                     /translation="MFDRPDSGGDVIRCGAFAEALKRSLEVPLLLQHKGQPVGRIEHL
                     SEDKRGLRVIAQVADGRVGELVRRGLRGLSFGYRVREASSAEGLRELRTLDLVEVSLV
                     KRPMQSKARVHAVEA"
     gene            complement(1533..2036)
                     /locus_tag="VHN55_07435"
     CDS             complement(1533..2036)
                     /locus_tag="VHN55_07435"
                     /inference="COORDINATES: protein motif:HMM:NF021453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HEX2803795.1"
                     /translation="MFRILKSLLVLFIGLHALFYALQNLANFGEAQAALGYVMSGADH
                     AAYPHTLFFKSGSSALHLAALILVLIGEFSVAFFGIKGGWDLFAARNGTPEKFRTAKS
                     AGLWAAGIALLTWFGLFMAFGGAFFQMWQTQVGDGSLRGAFYFAAISVLTMLFVVLTP
                     DDQASTA"
     gene            2179..3297
                     /locus_tag="VHN55_07440"
     CDS             2179..3297
                     /locus_tag="VHN55_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007715186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEX2803796.1"
                     /translation="MVEVKADALEESFEQFEEDGVAALKAALDVLKAKIASGAIAPQR
                     PALDGVKSQGANMFTEQYLRRGIEAGLEVKALSNSSDSIGGYAVPKEIDEQIDSTLLA
                     ISPIRSIANIVKVGSAGYRKLIASGGTPSGWVGFEADRPETGTPDFTEIVPASGELYA
                     NPAASQQMLDDAMFDVEAWLAQEIASEFARAEGAAFVGGTGVNQPLGFLSSPMDFAGD
                     GARAMGTLQAIGTGTAGAFPGTDPEDALIDLVQSLRSPYRQGAVFVMNSATAAEIRKF
                     RTADGAFMFQPSLAAGQPATLLGYPLIEAEDMPDIAPDSLSIAFGNFKAGYVIAERNA
                     TTILRDPYTHKPYVHFYATKRVGGQVVNSEAIKLLQFA"
     gene            3364..>3646
                     /locus_tag="VHN55_07445"
     CDS             3364..>3646
                     /locus_tag="VHN55_07445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803797.1"
                     /translation="MVDSFQPVFADLVRNFTTTAGTGNFELGAVMTGYRGFETAVKPG
                     DSFYYSVLGIEQADEFEVGRGTMQPDGTISRDPIGSALTDFSEGNKSIAL"
BASE COUNT          674 a         1040 c         1340 g          592 t
ORIGIN      
        1 aagggatcgg cgcggcgctt ctgctcaatg gcaatgccta tgtgcagctg ctgaccaact
       61 ccgacgagaa gccggcggag ctggtgatgc ttcggcccga gcgtgtcagc gtggagacgg
      121 actcgcaggg gtggccgatc ggctacaagt atcgcgccgg aggcaagagc gtgcgcttcg
      181 cgagggcgga cgggctcggg cggaacttgg tcgcgcacat ccgctcgctc catccccgcg
      241 acgaccatta tggaatgggc tgcctggacg cggcgattgc ggcggcgagc gtgcacaacc
      301 gggcgagccg ctggaacaag gggctgctcg acaatgcggc gcggccgagc ggggcgctga
      361 cctatgagcc ggcggacggg gcactgctgt cggccgagca gttcgcgcgg ctgaagagcg
      421 agctcgaagc ggagttttcg ggcacccaga atgcggggcg gccgctcctg ctcgaaggcg
      481 ggctgaagtg gcaggcgttg agcctgacgc ccgcggacat ggatttcgtg gctttgaaag
      541 aaggcgcggc gcgcgacatt gcgctcgcct tcggcgttcc cccggtattg gtcgggctgc
      601 cgggggacgc cacctatgcc aatgcccgcg aggctgggcg ggcgctgtac cggcagacga
      661 tcctgccgat ggcggggcgg atcctgggcg cgctgtcggc gatgctgggc gactggatgg
      721 ggccggtgaa gctggcggtg gataccgacc agatcagcga gctcgcggag gatcgggcga
      781 aattgtggga gcaggtcggg gcggcgtcgt tcctgagcga tgcggagaag cgcgagctgc
      841 tcggcttcgc ggcggagaaa gcggaatgac gaacgatgcg ctgctggcga cgctagtcgc
      901 gcaggcggac ggcaaggtta tcgacgtcgt caccttgcgc gcgctggtcg aggaatcgag
      961 ccagtccggg gccaggcggg cgctcggcgc gctcgggctg gacgatgaaa aagctcgagg
     1021 cgacatggac gagctgcgtc agctgctgtc ggcctggcgc gatgccaagc ggaccgcgtg
     1081 gcgggcggtg gtgacgtggc tggtccggat cgggctggcc gcggtgctgg tcggaatcgc
     1141 ggttcggctg cggcttacgg acttgatcag cggatgaggg tggctggata cgctgccgtg
     1201 ttcgaccggc cggacagcgg cggcgacgtg attaggtgcg gcgcgttcgc ggaggcgctg
     1261 aagcggtcac tcgaggtgcc gctgttgctt cagcacaagg gccagcccgt gggcaggatc
     1321 gagcatctga gcgaggacaa gcgagggctt cgcgtgattg cgcaggtggc cgatgggcgc
     1381 gtcggcgagc tggtgcggcg aggcctgcgc gggctgagct ttggatatcg ggtccgggag
     1441 gcgagctcgg ctgaggggtt gcgcgaatta cggacgctcg acctggtcga ggtgagcctg
     1501 gtcaagcggc cgatgcaaag caaagcgcga gttcacgcgg tcgaggcctg atcgtccggc
     1561 gtgaggacaa cgaacagcat ggtgaggacg gagatggcgg cgaaatagaa tgcgccgcga
     1621 agcgagccgt cgccgacttg cgtttgccac atctggaaga aggcaccccc gaacgccatg
     1681 aacaggccga accaggtgag gagggcaatg cctgcggccc agaggccagc ggacttcgcg
     1741 gtgcggaatt tctcgggcgt gccattgcgg gccgcaaaca ggtcccagcc gcccttgatg
     1801 ccgaagaagg ccactgagaa ctcgccgatg aggacgagga tgagcgcggc gaggtgaagc
     1861 gcggaactgc cgctcttgaa gaacaaggtg tgcggataag cggcgtggtc cgcgccggac
     1921 atgacatagc ccagtgccgc ctgcgcctcg ccaaagttgg cgagattttg aagcgcgtag
     1981 aagagcgcat gcaggccgat gaaaaggaca agaaggctct tgaggatccg gaacatcgtg
     2041 actccccctt cgagtttcgg atggggagga gggtaacgga caatagctga atgcccaaat
     2101 cgggcagtga aggaacgagc tgggtcgcgg tgaaccgcgg ccttttttct ttgcggattt
     2161 tacacaggag aagagtgaat ggtggaagtg aaggcggatg cgctcgagga gtcgttcgag
     2221 cagttcgaag aggatggggt tgcggcccta aaggccgcac tggacgtgct gaaggcgaag
     2281 atcgcgagcg gcgcgattgc gccgcagcgg ccggcgctcg atggagttaa gtcgcagggt
     2341 gcaaatatgt tcactgagca atatttgcgt cgcggaattg aggctggcct ggaggtcaaa
     2401 gcgctgtcga attcttccga ttccatcggc ggttacgcgg tgccgaagga aatcgacgag
     2461 caaatcgaca gcacgctgct ggctatctcg ccgatccgct cgatcgccaa tatcgtcaag
     2521 gtcggaagcg ccggttatcg caagctgatc gccagcgggg gaactccctc agggtgggtc
     2581 ggctttgagg cggaccggcc ggaaaccggc actccggact tcaccgagat cgtgcctgcg
     2641 tcgggcgagc tttacgccaa tccggcggcg agccagcaga tgctcgacga tgcgatgttc
     2701 gacgtcgagg cgtggctggc gcaggagatt gcaagcgagt tcgcacgagc ggaaggcgcg
     2761 gctttcgtcg gcggcacggg agtcaaccag ccgctcggat tcctgagctc gccgatggac
     2821 ttcgcgggcg acggagcgcg agccatgggg acgctgcagg cgatcggcac gggcacggcc
     2881 ggggcgttcc cgggcaccga tcccgaagat gcgctgatcg acctggtcca gtcgcttcgc
     2941 tcgccttacc ggcagggcgc ggtgttcgtg atgaactccg cgaccgctgc ggaaatccgc
     3001 aagttccgca ccgccgacgg cgccttcatg ttccagccga gcctggccgc cggccagccg
     3061 gcgaccctgc tcggctatcc gctgatcgag gcggaggaca tgccagacat tgcgccggac
     3121 agcctgtcga tcgcgttcgg caacttcaag gccggctatg tgatcgccga gcgcaatgcg
     3181 acgacgatcc tccgcgatcc ctacacgcac aagccctacg tccacttcta cgcgaccaag
     3241 cgcgtgggcg ggcaggtcgt gaactccgaa gccatcaagc tcctgcagtt cgcttaagcc
     3301 cgtcggggcc gcgcacccgg cgcggccccc cttttctttc aaaactcaac aacaggagcc
     3361 ggaatggtgg attctttcca gccggtattt gccgatctcg tgcgcaattt tacgacgacc
     3421 gcgggtaccg gaaacttcga gctcggcgcc gtgatgacgg gctatcgggg cttcgagacg
     3481 gcggtcaagc cgggcgacag cttctattat tccgtgctcg ggatcgaaca ggccgacgag
     3541 ttcgaggtcg gccgcgggac gatgcaaccg gacggaacca tcagccggga cccaatcgga
     3601 agcgccctca ccgacttcag cgaaggcaat aagagcatcg ctctag
//
LOCUS       DATAKH010000180         4868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_12963,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000180 DATAKH010000000
VERSION     DATAKH010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4868
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12963"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VHN55_07450"
     CDS             complement(<1..681)
                     /locus_tag="VHN55_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803798.1"
                     /translation="MKQQTKLEKSLFEPPPRREEFYTDVIENLAACDIPFLLSCTYAL
                     ASYTGIVRPTKDVDIFATAGDCLKILSLFKEKGFDVEIVDERWLARITQGEIFVDVIF
                     NMPTASTHVTEDWFENAPRTELFGSELRLVPPTEFVWSKMFVQDRYRYDGADVTHMIL
                     KRSEDIDWAQLISSMELHWEVLLVALLNFRFIYPSERHLIPRWVMDELLAACDSGEPA
                     VVNDFDVEP"
     gene            785..1501
                     /locus_tag="VHN55_07455"
     CDS             785..1501
                     /locus_tag="VHN55_07455"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX2803799.1"
                     /translation="MLSPKHDHTSALPQGHPCFGCPVRDLAICGTLDGDQLKEFRRLG
                     CCMALSSGQSLFSQGDSAASVFTVTEGILKSYRILPDGRRQVTGFHMAGDFVGNVVGD
                     VHEVTAEAVKDCRVCAFPVRRFENFVEDHPPMERELYIAAARQLAQAHEQMVLLGRMT
                     AIERIASFFLALSDRSQGADMVDLPMSRSDIADYLGLTKETISRVLSELKGSRMIRLQ
                     AIDRIQILDRPRLKQIASGG"
     gene            complement(1906..1982)
                     /locus_tag="VHN55_07460"
     tRNA            complement(1906..1982)
                     /locus_tag="VHN55_07460"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1946..1948),aa:Arg,seq:ccg)
     gene            complement(2013..3035)
                     /locus_tag="VHN55_07465"
     CDS             complement(2013..3035)
                     /locus_tag="VHN55_07465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2803800.1"
                     /translation="MQQKRAPRPLPLFLELVRAVSEREPELAAKALAGLAKYERAPRR
                     ETRAGRAAIARAGPASLRDCGGSGAPAVLVPSLINSPDVLDLDEESSLASAVAGMGRH
                     ALLLDWGRSSERADLDLGGHIEQLLLPLLGELDSPPSLIGYCLGGTMAIAASNLVPVE
                     RVATLAAPWRFSGYPRESRDSLLRLWESAKGPAERLNALPIEVLQSAFWSLDPTRTVA
                     KFASFADFSPDSAGARRFVTLEDWANEGESLPFPAARELIEDLFGSDLPGIGQWEVGG
                     RAMTHRLDCPVLHVTASGDRITPTPAAPAGETVRIDSGHVGMVVGSARTRLHESLAKF
                     LAAPCR"
     gene            3085..3603
                     /gene="phaR"
                     /locus_tag="VHN55_07470"
     CDS             3085..3603
                     /gene="phaR"
                     /locus_tag="VHN55_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016747372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HEX2803801.1"
                     /translation="MGKSGGKITIKKYANRRLYDTESSSYITLDRLAEMVRQGRDFEV
                     VDAKTGEDITGQVLTQIIVDEEARGSTMLPVNFLKQLIGLYGNSMQAVVPEYLDAAMD
                     AFKRNQKALGDAFSGNAFAEIAKRNMSMFEDASRAFTGASKTASSASEKQLDELRAEL
                     AKLQEKVDRLSK"
     gene            3600..4073
                     /locus_tag="VHN55_07475"
     CDS             3600..4073
                     /locus_tag="VHN55_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008070316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803802.1"
                     /translation="MRKIMFAFAAAIALPLVSAPTAAQAPAAIDVESLDPISGSWIYR
                     PIVGGSEADFLDSSATVRFKMRCNRSVRSVSIIRTAVPAAAPTLSIWTSTISRTVPAR
                     FLSTRELVADLAATDPLLDAIAFSRGRFGTAAAGAPMLVLPVWAALTRVIEDCRS"
     gene            complement(4331..>4868)
                     /locus_tag="VHN55_07480"
     CDS             complement(4331..>4868)
                     /locus_tag="VHN55_07480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803803.1"
                     /translation="RFAVERLAVDFLAAGFFAVERFAPVEAAPAPPVARCSSIGHLPD
                     MIRCAASDTASAISAPSLVALDITDFAALSALSAASIPASLIALRAFGLALIAAAAAA
                     RPAASISLLIAALAIFSPVDFDELEEDDLPDFELLPLLDFAIAIPPFQLARLDKRAKQ
                     QFRCGSEKAMELQGPKYC"
BASE COUNT          948 a         1499 c         1575 g          846 t
ORIGIN      
        1 gggttcgacg tcgaaatcgt tgacgaccgc tggctcgccc gagtcacacg cggcgagcag
       61 ttcgtccatg acccagcggg gtatgaggtg tcgttcgctc ggatagatga agcggaagtt
      121 gagcagggcg acgagcagga cttcccagtg caattccatg ctggaaatga gctgcgccca
      181 gtcaatgtct tccgagcgtt tgaggatcat gtgggtgaca tcggcgccgt cgtagcggta
      241 gcggtcctgg acgaacatct tcgaccagac gaactcggtc ggaggcacca gcctcagctc
      301 gcttccgaac agctccgttc tgggcgcgtt ctcgaaccag tcctcggtga cgtgggtcga
      361 agccgtcggc atgttgaaga tcacgtcgac gaagatctcg ccctgcgtga tccgcgccag
      421 ccatcgctca tcgacgattt caacgtcaaa tcccttctcc ttgaaaaggg agaggatttt
      481 caggcagtcg ccggcagttg cgaagatgtc gacgtccttg gtcgggcgca cgatgccggt
      541 gtagctggcg agcgcgtaag tgcacgacag aaggaacgga atgtcgcaag cagcgagatt
      601 ttcgatcacg tcggtgtaga attcctctcg ccgcggaggc ggctcgaaga gagatttctc
      661 gagtttggtt tgctgcttca ttcgacggct gaacggcagg gccgagcagc gggttccggg
      721 gcaccggggt ggtacggaag attgcgtatg caccgattga cctggatcat ttagccgttg
      781 gcgcatgctt tcgcccaaac acgatcacac cagcgccttg ccccagggcc acccatgctt
      841 tggctgcccg gtccgcgacc tagccatttg cgggacgctc gatggcgacc agctcaagga
      901 gtttcggcgc ctcgggtgct gcatggcgct aagcagcggc caaagcctgt tcagccaggg
      961 cgatagcgcg gcaagcgtct tcaccgtgac cgaaggcatc ttgaagagct accgaatcct
     1021 acccgacggg cggcggcagg tgaccggctt ccacatggcc ggggacttcg tcggcaacgt
     1081 cgtcggcgat gtccacgaag tgacggccga agcggtaaag gactgcaggg tttgcgcctt
     1141 cccggttcgc cggttcgaga atttcgtcga ggatcatcct ccaatggagc gcgagcttta
     1201 tatcgcggcc gcccgccagc tggcacaggc gcacgagcag atggtcctgc tcgggcggat
     1261 gaccgcaatc gaacggatcg cgagcttctt cctggcgctt tcggaccggt cgcagggcgc
     1321 cgacatggtc gacctcccga tgagccgctc cgacatcgcc gattatctgg gcctgaccaa
     1381 ggaaacgata agccgcgtgc tatcggaact caaaggcagc agaatgatcc gactgcaggc
     1441 gatcgaccga atccaaattc tcgaccgccc gaggctgaag cagatcgcgt cgggcggcta
     1501 gccgaagaag gcaaaggccc ggacgccacg agcgaatatc ggcgtcaggc cggcgaacgg
     1561 ctccgctgcg aacgaacatc ctaaccatcg gtaacatgtg ctttttctgc ttccgcgcta
     1621 cctcgagtga atgccgacgg cacatcctcg caccggagcc gatgttcttc gccttggcgc
     1681 gggcgtcagg gtcgagtgcc gcgagtgcgg atccgtcgtc accttcggcc cggccgattt
     1741 cgtgaaaagc tgcgggaccg gatcgctggg cggcatcgcc aagcatatgg cgtgcgcaag
     1801 ctgtggggag aagagggcgc aactgcttgt gctgcccgca cccccgagca tgccgtcgcc
     1861 ccgctcgatt tcgttctgag catgcccgcg cagatgcgga aacgatggcg cacccgacag
     1921 gattcgaacc tgtggcctct gccttcggag ggcagcgctc tatccagctg agctacgggt
     1981 gcgcgagaag cgcgacttag cgacgacggt agctagcggc aaggagcggc gaggaatttc
     2041 gccagcgatt cgtgaagcct cgttcgagcc gaaccgacga ccatcccgac atggccggaa
     2101 tcgatccgga ccgtctcgcc ggcgggagcg gctggcgtcg gcgtgatccg gtcgccggaa
     2161 gcggtgacgt ggaggactgg gcaatcgagc cggtgggtca tcgccctgcc gcctacctcc
     2221 cactgcccga ttcccggcaa gtcgcttcca aagagatcct cgatcagctc gcgagcggca
     2281 gggaagggca gggactcgcc ctcgtttgcc caatcttcca gcgtgacgaa ccggcgagca
     2341 ccggcgctgt ccggggaaaa atcggcgaac gacgcgaatt tcgccactgt ccgtgtcgga
     2401 tcgagcgacc agaatgcact ttgcaggact tcgatcggga gcgcattgag gcgttccgcc
     2461 gggcccttgg cgctttccca aagccgaagc agggaatcgc gcgactcccg aggatagccc
     2521 gagaatcgcc agggtgcggc cagcgtcgcc actcgctcga ccggaacaag attcgaagcg
     2581 gcgatcgcca ttgtgccgcc gaggcaatag ccgatcagcg acggcggcga gtccagctcg
     2641 cccagaagcg gcagcaacaa ttgctcgatg tgcccgccga gatcgagatc ggcccgctcc
     2701 gaggagcggc cccagtcgag gagcagggca tgccgtccca tccccgcaac cgccgacgcg
     2761 agcgagcttt cctcgtcgag gtcgagcacg tcgggcgagt tgattagcga cggcaccagc
     2821 accgcaggcg ctccgcttcc gccgcagtcg cgaagacttg cggggccggc ccgagcgata
     2881 gcagcacgcc cggcgcgagt ttcgcgccgc ggggcccgct cgtatttcgc caggccggcg
     2941 agagccttgg cagcgagctc gggctcccgc tccgacacgg cgcgcacgag ctccaggaac
     3001 aggggcagcg ggcgcggcgc gcgcttttgt tgcaccgcac tctttgcgtc tggtacgctg
     3061 tcgtgaaagt gtctggagcg ggtcatgggc aagtctggcg gcaagattac gatcaagaag
     3121 tacgccaacc ggcggcttta tgacaccgaa agctcgtcct acatcacgct cgaccggctg
     3181 gccgagatgg ttcgccaggg ccgcgacttc gaagtcgtcg acgccaagac cggcgaggac
     3241 atcaccggcc aggtcctcac ccagatcatc gtcgacgagg aagcgcgcgg atcgaccatg
     3301 cttccggtga acttcctcaa gcagctcatc gggctgtacg gaaattcgat gcaggcggtt
     3361 gttcccgaat atctcgacgc cgcgatggac gccttcaagc gcaaccagaa ggcgctcggc
     3421 gatgcattca gcggcaatgc cttcgccgag atcgccaagc gcaacatgtc gatgttcgag
     3481 gacgcgagcc gggctttcac cggcgcgtcg aagaccgctt cctccgcttc ggaaaaacag
     3541 ctcgacgagc tgcgcgcgga gcttgcgaag ctccaggaaa aagtcgatcg cctgagcaaa
     3601 tgagaaaaat catgtttgcg ttcgcggctg cgattgcgct gccgcttgtc tccgccccga
     3661 ctgcagccca ggcgcccgcc gcgatcgacg tcgaatcgct cgacccgatt tcgggtagct
     3721 ggatctatcg cccgatcgtg ggaggcagcg aagccgattt cctcgattca tcggcgacgg
     3781 tccggttcaa gatgcgctgc aaccgctcgg ttcggtcagt ttcgatcatc cggaccgcgg
     3841 ttccggcggc ggccccgacg ctgtcgatat ggacgagcac gatctcgcga accgtcccgg
     3901 ctcgattcct ttcgaccagg gagctggtcg ccgacctcgc cgctaccgat cccttgctcg
     3961 acgctatcgc attcagccgc ggccgcttcg gcacggctgc agcgggcgcg ccgatgctgg
     4021 tattgccggt ctgggcggca ctgacccgag tgatcgagga ttgcaggagc tgactcgcga
     4081 caggcgagtc ggaagcgcga agtcaaagag aattgccgaa acaaaatcgc aatacaagtc
     4141 ttgcgctgga ggcgtcggct attcatcttc caagtcggct tcaacgcagc gaaaggaggt
     4201 gatccgatgt ctcatggttc agcaggcagg tcggaaaggg gtgttcgtcg gccataggtg
     4261 ctggacggac ggccgtcact tccggccgct gaccatgttc gaggggatcg tcggttcgcc
     4321 ggcggtcccc ttaacagtat ttgggcccct gtaattccat tgccttttcg ctaccgcaac
     4381 ggaactgttg ttttgctcgt ttgtctaaac gggcaagttg aaacggaggg attgcgatgg
     4441 cgaaatccag caaaggcaag agctcgaaat cgggcaagtc gtcttcttcg agctcgtcga
     4501 agtcgacggg tgaaaaaatc gccaatgccg cgatgagcaa ggaaatgctc gccgccggtc
     4561 ttgccgccgc ggcggccgcg atcagcgcca gcccgaaggc gcgcaaggcg atcaaggacg
     4621 cgggaatgga cgccgccgac agcgccgaca aagcggcgaa atcggtgatg tcgagcgcga
     4681 ccaagctggg cgcgctgatc gccgaagcgg tgtctgacgc ggcgcagcga atcatgtccg
     4741 gcaagtggcc gatggacgag cagcgcgcga ctggcggcgc tggcgctgcc tcgactggcg
     4801 caaaacgctc taccgcgaag aagccggcag ccaggaaatc cacagccaag cgttcgacag
     4861 cgaaacgc
//
LOCUS       DATAKH010000181         1626 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_38701,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000181 DATAKH010000000
VERSION     DATAKH010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38701"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..163)
                     /locus_tag="VHN55_07485"
     CDS             complement(<1..163)
                     /locus_tag="VHN55_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX2803804.1"
                     /translation="MSIDFIRPEVDELRPRISVIGVGGAGGNAVANMIRSDVQGVDFV
                     VANTDAQALN"
     gene            471..1052
                     /locus_tag="VHN55_07490"
     CDS             471..1052
                     /locus_tag="VHN55_07490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803805.1"
                     /translation="MSILVQLKRHKKVAAPLAALALLAGCATATPYQPLGATQTQGGF
                     VDQQLDQNHYRVSFYGNTLTSRQQVENYLLFRAAELTLARGFNCFTVVNQGTDRHTTI
                     QPDPFGYRYGGGYGYAGWSPYWRTHGPWGWHSYDPFMRGSLFPPRYDTIDRYQAMADI
                     AVSRGQCQAGARTFNAAEVVANLRPYIVYPRPR"
     gene            complement(1099..>1626)
                     /locus_tag="VHN55_07495"
     CDS             complement(1099..>1626)
                     /locus_tag="VHN55_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division FtsA domain-containing protein"
                     /protein_id="HEX2803806.1"
                     /translation="AATFGVNRRDAERLKCFYGSAMMSPRDNHELIDANQIGTEDGAE
                     PVRITRAQLMTVIRHRVEELTGQIDTGLKGLGFTGPIGRPVVLTGGGAELKNIADYMQ
                     GVLGRPVRVGRPRMLAGLPDAHSGPAFSTLVGLACLGGSRSGDIRDIALGTIVRQPPA
                     KGMLGRLITAIKGGY"
BASE COUNT          302 a          530 c          506 g          288 t
ORIGIN      
        1 ggttgagcgc ctgcgcgtcc gtgttggcga cgacgaagtc gacaccctgg acgtcggaac
       61 ggatcatgtt ggcgaccgcg ttgccgccgg cgccgcccac cccgatgacg ctgatccgcg
      121 gccgaagttc gtcgacttcc ggccggatga aatcgatgct cattggtccc acccccaaat
      181 caggcaacat tttgaaccca caatgtgaat ctttgaatca tcgcgagtcg caagccaagc
      241 gaaaagttaa cgggagagca aaaaagtggg gatggcgact cttgggactc accccccggt
      301 tcgtggacca tcgaatggca tgaccacgct gttcgagaca gcagcggtta atgcagctcg
      361 gcgcagtaca ggctcagtcc aacggtgcaa ttgacgcacg tgcggtcgcc ggaacgccgt
      421 gttccgccga aacgttgata atccgaccgc actcccacgg aggcacgagt atgagtatcc
      481 ttgttcaact aaaacggcac aagaaggtcg cggctccgct tgccgccctg gcgctgctcg
      541 ccggctgtgc cacggcgacc ccgtaccagc cgcttggcgc cacccagacg caaggcgggt
      601 tcgtcgacca gcaactcgac cagaaccact accgggtcag cttctacgga aacacgctga
      661 cgtcgcggca gcaggtcgaa aattacctgt tgttccgggc ggccgaactg acgctggcgc
      721 gcggcttcaa ctgcttcact gtcgtcaacc agggcaccga ccggcacacg acgatccagc
      781 cggatccgtt cggttaccgc tatgggggcg gctatggcta tgcaggatgg tcgccttact
      841 ggcggacgca cgggccgtgg ggatggcatt cctacgatcc gttcatgcgc ggatcgctct
      901 tcccgccacg ctatgacacg atcgaccgct atcaggcgat ggcggacatc gctgtgagca
      961 ggggacagtg ccaggccggc gcgcgtacct tcaatgccgc cgaggtcgtg gcgaacctgc
     1021 gaccgtacat cgtctatccg cggccgcgct aagcggtcct aatatcgaag gcggcgaccg
     1081 gctgtacctc cggggcagtt agtagccgcc tttgatcgca gtgatcagcc ggccgagcat
     1141 gcccttggcc ggcggttgcc gaacgatcgt tccaagggcg atgtcgcgga tatcgccgct
     1201 tcgcgatccg ccaaggcaag ccagcccgac cagggtcgaa aatgccggcc cgctatgcgc
     1261 gtcgggaagg ccagcgagca ttcgcggccg gccgacgcgt accggccggc cgagtacgcc
     1321 ctgcatgtaa tcggcgatat tcttgagctc cgcgccgccg cccgtcagga ctacagggcg
     1381 gccgatcggg ccggtaaaac cgagcccctt caacccggtg tcgatctggc ccgtcagttc
     1441 ctcgacgcgg tgacgaatga ccgtcatcag ctgcgcgcgc gtgatccgga ccggctctgc
     1501 gccgtcttcc gttccgatct ggttggcgtc gatcagctcg tgattgtcgc gcgggctcat
     1561 cattgccgag ccgtagaagc atttgagccg ctccgcgtcg cggcggttga ccccgaaggt
     1621 cgctgc
//
LOCUS       DATAKH010000182        18431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_18977,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000182 DATAKH010000000
VERSION     DATAKH010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 18431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18431
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18977"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1251
                     /locus_tag="VHN55_07500"
     CDS             <1..1251
                     /locus_tag="VHN55_07500"
                     /inference="COORDINATES: protein motif:HMM:NF033912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HEX2803807.1"
                     /translation="AILLATWFVARAAKWILQKAIDRSPTLKKHISGTPNETVGQQLG
                     TVVKLIIWLVGIMAALNYLGVGQILEPINRLTVDIFDFLPRLIGAGLIFFIGLIVARI
                     VQRLLETALTAVNVDGLLARIGIGDTAGTVRTEPDAVPPGAAPGATRASVAKAVGILA
                     FAFIIIPAGIAAINVLGIEAISVPATNMLNDMLAAIPHILTAALWLGIAFIAARFAQT
                     VIEGILPPTGFDRAVQSTGVLPASSSPSKIVARIAFIAIMLAAAIEAAKQLGGGTVAI
                     FLAQVTELGGKVIFGTLIIVTGIFLARIIAGLVGSSTGEDSYAKTLVRYAIIALFTAI
                     GLTFMGLADQIVILAFGLILGSAAIAVALAFGLGGRDAAARVLERYVDENGPPTPRRA
                     PPPPRIERSGPPDDEAEDRQPPLV"
     gene            1248..2102
                     /locus_tag="VHN55_07505"
     CDS             1248..2102
                     /locus_tag="VHN55_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803808.1"
                     /translation="MTPHFVSYVAIDWSGAKGKKHRGIAIAEARGDAPPRLVRAGHSW
                     SREEVLEWLLGQAEKEPTLFGFDFSFAPPFLERGEYLPGESGVPDSARELWAYVDHRS
                     DDIDLGAARFLEQVHRRHFYFGIADGVKADFMRFRLCDQQLNRQGGRKTASAFDAIGA
                     AQVAKASFAGMRLLHRLDGKVAIWPMDPLPGQGSAVVEIYTRIYLRRAGMPGTKLRTR
                     RQLNQALAGLGSKPVRLRFEPNDHQTDALVTAAGMRQLARTEPRAFAPQSLTADIART
                     EGWTFGIL"
     gene            2121..2196
                     /locus_tag="VHN55_07510"
     tRNA            2121..2196
                     /locus_tag="VHN55_07510"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2154..2156,aa:Thr,seq:tgt)
     gene            complement(2258..3031)
                     /gene="xth"
                     /locus_tag="VHN55_07515"
     CDS             complement(2258..3031)
                     /gene="xth"
                     /locus_tag="VHN55_07515"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019517397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX2803809.1"
                     /translation="MRIASYNINGITSRLSILLRWLDEFRPDVVGLQELKTTDEKFPA
                     DAIEKAGYSAIWHGQKSWNGVALLSRVGELHETRRCLPRDPDTGQSRYIEAAVCGLLV
                     GNMYAPNGNPWPGPKFDYKLAWLDRLCDYAQELIDNDVPAVLIGDYNVIPTEQDVYKP
                     ERWAKDALFSPQAREKYAELVTQGWTDAIRHLHPDDRIYTFWHYWRRSFERDAGIRID
                     HALLSPKLAPKLKAAGVDRTPRAWEKTSDHAPMWVEVEV"
     gene            3333..4292
                     /locus_tag="VHN55_07520"
     CDS             3333..4292
                     /locus_tag="VHN55_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HEX2803810.1"
                     /translation="MALDLYQRLGLKRGASEAEIKKAYRALAKQLHPDRNKDNPDAAK
                     RFGEVTHAYDMLSDKDKRARYDRGEIDEEGNPKMPFGGGFGGHSGSRPGAGRPGGPSG
                     FEGFQTEFGDAADISDLFEGLFGGRSAGAGRGGFGGFRQRARAPQKGADIAYRLKVSF
                     VDAAKLAPQRIKLADGKTIDLKLPKGVEDGTRIRLSGKGQPGPAGPGDAIVTISVQPH
                     PFFRRDGNDIRLDLPVNLKEAVLGAKVKVPTPEGPVMMTIPKGSSSGRVLRLKGRGFT
                     GKNGTRGDELVTIEIDVPSGDSELESFAEKWSGGGNPRSSLGV"
     gene            4327..5358
                     /locus_tag="VHN55_07525"
     CDS             4327..5358
                     /locus_tag="VHN55_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX2803811.1"
                     /translation="MREVSPLSPEARRKRLASASAAFGPDVATRLKPRHYVWEVVKRV
                     AVGVYNDGFIHAGNLAYLSILALFPFLILAAAVAHLIGQSEDAQLAVANLLARLPPNV
                     AGTLRAPIGEVLEARTGLLLWFGAIIGLWTAGSFVETIRDILRRAYGVKYSAPFWEYR
                     LGSILVILAAVFLLMIAFAASVALSSLHAVLVQWFPFAEGIGRTLGIYRLVPAATMFL
                     TFYALFYALTPLRYRKHGCRKWPGALFITAWWLATVELLPQVLSLFGGYSLTYGSLAG
                     VMVALIFFFMIGLGVVTGAELNAALADYEPTALKGEIYSGPFKDELEVEELSPGEDVE
                     AVLEGEPEL"
     gene            5355..6158
                     /gene="fabI"
                     /locus_tag="VHN55_07530"
     CDS             5355..6158
                     /gene="fabI"
                     /locus_tag="VHN55_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEX2803812.1"
                     /translation="MTGLMKGKRGLIMGLANDRSLAWGIAKSLADQGAELAFSYQGEA
                     LEKRVRPLAEQLGSSFLLDCDVSSDKALDDSFAELKTRWDSLDFVVHAIGFSDKNELR
                     GKFVDTTLDNFLLTMNISVYSFIAVAQRARAMMKPGGSLLTLSYYGAEKVIPHYNVMG
                     VAKAGLEASVKYLAMDLGPEGIRVNAISAGPIKTLAASGIGDFRYIMKWNEYNSPLRR
                     NVTIEDVGGGALYLLSDLASGVTGEIHHVDAGYNVVGMKAEDAPDISTV"
     gene            complement(6175..7365)
                     /locus_tag="VHN55_07535"
     CDS             complement(6175..7365)
                     /locus_tag="VHN55_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX2803813.1"
                     /translation="MRQLLRSAWVIGRRDFTATVFSKAFIFFLIGPLFPVLLGGLFGG
                     IGAHVASQTEQPRVAVVAPAAEFEKLAAAHVRLTEAMDERRVIEIIGVVPSGDPQAQA
                     RDLLRSTERPVVAVLTGAPDEPQLTGAVDQGGAVAGQVAMLLDSAQSEARPLSVTTTQ
                     RSTGSETRSRTITAQTGQMILFFLTIILAGMTLSQLIEEKSNKVIEVLAAAVPIESIF
                     VGKLFAMLATSLVGIVVWIAAGVAALSMFMAGGTASIPEPAVGTGAFVVLTVIYFAMN
                     YLLLGSVFLSIGAQASTVREVQTLSMPVTVAQVLIFGFAALAVGSPNSGMAIGGALFP
                     LSSPLVMVARAAEEPELWPHLLAILWQAAWIALVVFVSARLFRRTVLKSGPVKRRWWK
                     RAAA"
     gene            complement(7362..8321)
                     /locus_tag="VHN55_07540"
     CDS             complement(7362..8321)
                     /locus_tag="VHN55_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007686970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2803814.1"
                     /translation="MLRQPSRQSRPGECALEAKDLVKDFGDTRAVDGVSLAVPTGSIY
                     GLLGPNGAGKTTTLRMLLGIIDPSSGSRSVLGRSRPIDAAPEIGYLPEERGLYPAMHC
                     RDAIAFMGALRGLPLAEGRRRADELLAEHRLGDWARKPIRTLSKGMAQTVQLLGTIVH
                     KPRLIVLDEPFAGLDAINQARLEELIRSEARGGVTVIFSTHVIAHAERLCERIAIIAK
                     GRVAFEGAVDTARAKLRPIVRLRTRDEDGQWRSAIPDGARREGGEWVFELPASGPEPL
                     LKALIDGGAGIETLAIERPGLHDAFVAIAGDAAAKAMAEETPQ"
     gene            8368..9438
                     /gene="queG"
                     /locus_tag="VHN55_07545"
     CDS             8368..9438
                     /gene="queG"
                     /locus_tag="VHN55_07545"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017671665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEX2803815.1"
                     /translation="MDRGEDLKEAISAEAKRLGFVTCGFARADSALEAGADLMRWLAD
                     GRHGAMEWMEARAHQRVAPTALWPEARTAIALGMSYAPETDPLALADDGSAGRISVYA
                     QGGDYHKTVKKRLKALARWLVDKSQCELKVFVDTAPVMEKPLSASAGIGWQGKHTNLV
                     SREHGSWLFLGVILTTLDLEPDAPARDTCGRCTRCLDSCPTGAFDGPRRIDARKCISY
                     LTIEHNGAIPVELRRPMGNRIYGCDDCLAVCPWNRFADAAAANQAFLPREELKAPKLE
                     DLLSLDDAAFREKFAGSPIKRIGVRRMIRNCLVAAGNSCDPKLIESVGRHLDDDDEVI
                     AEAARWAMAELQGESSESMQSA"
     gene            complement(9402..9743)
                     /locus_tag="VHN55_07550"
     CDS             complement(9402..9743)
                     /locus_tag="VHN55_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803816.1"
                     /translation="MRRLVVLSTSLLLAACATAPRPAQPEQVPPSAHTRGEIIGLTAQ
                     ELVSRFGTPALQIREGESLKLQFRSRECVLDAYLYPSGTAPHRVTYVDTRTRSLAEID
                     QALCIDSLDSP"
     gene            9815..10810
                     /locus_tag="VHN55_07555"
     CDS             9815..10810
                     /locus_tag="VHN55_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014078183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HEX2803817.1"
                     /translation="MTNKAVDVLAIGNAIVDVIADAGEEFLDEQGLAKGSMRLIDEAE
                     AERLYAAMGPGREVSGGSAGNTAAGLAALGCRAAFIGQVADDELGGIYRHDIESMGID
                     FVVPPRSNVGATARSLILVTPDAQRTMNTFLGAAQKLERSAIDSAVVESARILYLEGY
                     LWDPAQPRAAMEAAIDIARSAGTKVAFTLSDSFVVERHRDDFLRLIDHGKIDILFANE
                     QEFLHLAHGTDLDSAIAELSPKVPTLVVTRSEHGALACCGGERAQVPAEPIERLVDTT
                     GAGDLFAAGFLAGQVRGRTLEESLRLGAICAAEVIQHYGARPELDLAALAAPLLK"
     gene            complement(10861..13929)
                     /locus_tag="VHN55_07560"
     CDS             complement(10861..13929)
                     /locus_tag="VHN55_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2803818.1"
                     /translation="MRKSIWLLSAALLFPAPLYAQQADPGQPTQPTGPEGEEEIDQAN
                     TAGQGAVADTAVSPQPVDSGNVLVTATRRNQALSDVPLAVSAVSADNLQNSGATDIRQ
                     LNQLSPSLLVSSTQSEGLAVARIRGIGTVGDNPGLESSVGVFIDGVYRSRTGMGLTEL
                     GPLERIEILRGPQGTLFGRNTSAGLISIITAQPRFESEISGAVTVGNYDLRRLEASAT
                     GPITPVLAARLDGVWMKRDGFLEDVISGRDVNDRNRWLLRGQLLFEPSSDLSVRLVAD
                     YTRRKEECCAAVYLPAHDFTAAGPQPSTFAGILRGMGASINDDPFERDVAITPGRDFE
                     NKVRDWGVSGEVNYDFGGAKLTSITAYRFNNLTRGQDIDYNNLDIFYRPSDGGSGARF
                     KTFSQELRLNGEAFGGKLDWLVGAYLANERLRVIDNVTYGEDLPKYFNCVVGANFASS
                     FINSGVPALAALGSTLVNPLNPTCLDPASAGGLLPFAGANATALAAFARLGAFAGAPF
                     TDSGFANLATALGLPGQSLAGVALDDEWKHKSNNWALFTHNIFEITPGLDLTVGVRYT
                     HEKKSIDASLSDNNTLCTFYSTFVAALQQLPCVFVPSVPGGGPFTFSDSRTENKFSGT
                     AVLSYKPTPELLTYASYSRGYKAGGFNLDRAALWRAFAPTVPPPPFPVGGTGAICTTE
                     TQTNCQGRMASGADLQFKPETVDAFEIGAKYNGRGFDLNVAVFHELFENFQLNTFNGL
                     NFVVENINSCKGELDPPDTDTDNSLFTGSCSGGTKAGVRSQGVEIELFTRPMRYLDLN
                     AGVTYADTKYRRRLVGADGRPLTNALFQLPGRRVSNSNEWTLTGAAAWTPPIGNTGLS
                     GLVYADVRHMSGFNTGSDLDLEKFQEAFTVVNARIGIRGRDNAWSLEFWAQNLFDEDT
                     VQVAFDAPVQGSGTQRGVEQGSAAGFYDRSTQLFGAFLGEPRTFGATFRMAFSPPPPA
                     PPLPPPAAPAPVVEAPATQVCADGTTILATDSCPVPPPPPPPPPAAPERG"
     gene            complement(14096..14698)
                     /gene="infC"
                     /locus_tag="VHN55_07565"
     CDS             complement(14096..14698)
                     /gene="infC"
                     /locus_tag="VHN55_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEX2803819.1"
                     /translation="MAGERLIRYFANQLTGEKAIPPPYPRRPQTPPQFSGPRYNEFIQ
                     SPKVRVIDDNGENLGVMYTREAIEQAAEAGLDLVEVSPNVDPPVCKFLDIGRYKYEAQ
                     KKANEQRKKQKTQEIKEIKMRPNIDDHDYDTKMKKVFEFLEDGDKVKVTMRFRGREMA
                     HGELGMAVLRRVQEQTADLAKIEAHPRMEGRQMLMVLAPK"
     gene            complement(14759..15148)
                     /locus_tag="VHN55_07570"
     CDS             complement(14759..15148)
                     /locus_tag="VHN55_07570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEX2803820.1"
                     /translation="MQIWRDAVDATHGFLSAEDRAAIDAMVANEFLPNADLILAVDED
                     DHPLGFLVMDGQAIDALFVDPAHHRRGVGTFLLDHALSLAPDATVDASEQATNALPFY
                     LARGFRIVGRSPTDPQGRPYPLIHLAR"
     gene            complement(15187..17184)
                     /gene="thrS"
                     /locus_tag="VHN55_07575"
     CDS             complement(15187..17184)
                     /gene="thrS"
                     /locus_tag="VHN55_07575"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014074473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEX2803821.1"
                     /translation="MTKMFKISLPDGSVREVPEGSTPADVAAAIGPGLAKAALAARVD
                     GELRDLNRPIESDSSLALVTSRDEAEALELVRHDFAHILAEAVQNLFPGTQITFGPAT
                     EDGFYYDFAPPAERGQFTEEDLPAIEEEMRRIIAADKPLCREVWTRDQVREFFEKQGE
                     AFKAEWVMELPEGEAITMYRTGEGEGAWMDLCRGPHLASTGKLDPQSFRLTRVSGAYW
                     RGDPKNPMLSRIYGTAWLNKKQLDAYLVRLEEAAKRDHRKIAQEMDLFHLQAEAHGSV
                     FWHSNGYIIWRELEAYMRRRLDSAGYREIKTPQLIDSRLWVLSGHWGKFRENMFVVPD
                     EIPATEDGKPVITGDAELMALKPMNCPAHIQVFKQGITSYRELPLRLAEFGCCHRNEP
                     HGALHGIMRVRQFTQDDAHIFCTHEQLVEETKSFCALLDAVYRDLGFADYQVKLATRP
                     EQRIGSDEDWDRAEADLETALKETGLDYEVLPGEGAFYGPKLEFHLQDAIGRTWQCGT
                     LQLDPQMPKRLDATYIGADGEKHSPLMLHRAILGTFERFIGILIEHYAGKFPLWLAPV
                     QAVVATIVSDADDYARDVAAKLAARGIRVETDLRNEKINYKVREHSLAKVPLLLVVGK
                     READEGTVALRRLGSEERQVAMSLDEAVAMLAAESTPPDIK"
     gene            17328..17744
                     /locus_tag="VHN55_07580"
     CDS             17328..17744
                     /locus_tag="VHN55_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803822.1"
                     /translation="MKGNNPAFRRYTWSVMLLMTAYVLVLIGVNLYFDNSAPTGAAAY
                     AAAILPALPIVGVFIVIGRLLVDLRSDEYVRMLLVRQTLVATAFALTVATVWGFLEGF
                     DLAPHLEAYWFAVLWFGGLGVGGCANAFLESRGGGE"
     gene            17741..17956
                     /locus_tag="VHN55_07585"
     CDS             17741..17956
                     /locus_tag="VHN55_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX2803823.1"
                     /translation="MNNHLRVLRAERGWSQADLAERLEVSRQSVNAIETGKYDPSLPL
                     AFRIAELFGLSIEEVFVSPAHQSSRAI"
     gene            18133..>18431
                     /locus_tag="VHN55_07590"
     CDS             18133..>18431
                     /locus_tag="VHN55_07590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803824.1"
                     /translation="MTPAMAQSSFSSDMQAPLGATATVNLRVPLGAAPTKQRKATYGL
                     TLGYGQQTDGLTSDGRIATRQAKFADIRFTGAFKLRRAEVMTFDLANLDKDPRLN"
BASE COUNT         3211 a         5921 c         6045 g         3254 t
ORIGIN      
        1 gcgatcctgc tcgcgacctg gttcgtcgcc cgcgccgcca agtggatctt gcagaaggcg
       61 atcgaccgct cgccgacgct caagaagcat atttccggaa cccccaacga gaccgtcggc
      121 cagcagctcg ggactgtggt caagctgatc atctggctgg tcggcatcat ggccgcgctc
      181 aactatctcg gcgtcggcca gatcctcgag ccgatcaatc gcctgaccgt cgacattttc
      241 gacttccttc cgaggctgat cggcgccggc ctaatattct tcattggcct gattgtcgcg
      301 cggatcgtcc agcgcctgct tgagaccgcc ttgactgccg tcaatgtcga cggcctgctc
      361 gcccggatcg gaatcggcga caccgccggc acagtccgca ccgagcccga tgcggtcccg
      421 cccggagcgg cgcccggtgc aacccgcgcc agcgtcgcca aggcagtcgg gatcctcgcc
      481 ttcgccttca tcatcattcc cgccggcatt gccgcaatca acgtgctcgg gatcgaggcc
      541 atttcggttc cggcgacgaa catgctcaac gacatgctcg ccgcaatccc gcacattctg
      601 acggcggcct tgtggctggg aatcgcgttt attgctgcgc ggttcgcgca gaccgtaatc
      661 gagggaatcc tgccgccgac cggcttcgac agagcggtgc agtccacggg cgtccttccc
      721 gcctcgagca gcccgtcgaa gatcgtcgcc aggatcgctt tcatcgcgat catgctcgcg
      781 gccgcaatcg aggcggcgaa gcaattgggt ggcggcaccg tcgccatctt cctggcgcag
      841 gtcaccgagc tcgggggcaa ggtgattttc ggcaccctga ttatcgtcac cggcatcttc
      901 ctcgcccgga tcatcgccgg tctggtaggg agctcgaccg gcgaagacag ctatgcgaag
      961 acgctggtgc gctacgcgat catcgccttg ttcaccgcca tcggcctcac cttcatgggc
     1021 cttgccgacc agatcgtgat cctggccttc ggactgatcc tcggatcggc ggcaatcgcg
     1081 gtggcgctcg cgttcggcct cggcgggcgc gacgccgcgg cgcgggtgct ggagcgctat
     1141 gtcgatgaga acgggccgcc gactccgcgc cgggcgccgc cgccgccgcg gatcgagcgc
     1201 agcgggcccc cggacgacga ggcggaggac cggcagccgc cgctggtgtg acgccgcact
     1261 tcgtttccta cgtcgcgatc gactggtcgg gcgcgaaggg gaaaaagcac cggggaatcg
     1321 ccattgccga ggctcgcggc gacgctccgc cgcgcctggt ccgggccggt catagctggt
     1381 cacgggaaga agtgctggag tggctcctgg ggcaggcgga gaaagagccg acgctgttcg
     1441 gcttcgactt cagtttcgcc ccgccgttcc tcgagcgcgg cgaatacctg ccaggggaat
     1501 cgggagtgcc agacagcgct cgcgaattgt gggcctatgt cgatcaccgc agcgatgaca
     1561 ttgacctcgg cgcggcacgc ttcctcgaac aggtgcaccg caggcacttc tatttcggca
     1621 tagccgacgg cgtgaaagcc gacttcatgc gattccggct gtgcgaccag cagctcaacc
     1681 gccagggggg ccgcaagacc gcgagcgcgt tcgacgcgat cggagccgcc caggtcgcca
     1741 aggcgagctt cgcgggcatg cggctgctcc accggctcga cggcaaggtc gcaatctggc
     1801 cgatggaccc gctcccaggc caaggaagcg cggtcgtcga aatctacacg cggatctatc
     1861 tccgccgtgc cggaatgccc ggaaccaagc tccgcacgcg caggcagctc aaccaggcgc
     1921 tagcaggact cggaagcaag ccggtgcggc ttcgcttcga gcccaacgac caccagaccg
     1981 acgctctcgt gacggccgcc ggaatgcgcc agctggcgcg aaccgagccg cgcgcatttg
     2041 cgccgcagag cctgacagcc gatattgccc gaaccgaagg ctggacgttc ggcatccttt
     2101 gacgcagatg ccgcctcagg gccggattag ctcagttggt agagcagcgg ttttgtaaac
     2161 cgaaggtcgc gggttcgaat cctgcatccg gcaccattgc gacgcgcagc gagtccgggg
     2221 gactggtgag catcgcaatc cgagcgaaag cgagggccta cacctctacc tcgacccaca
     2281 tcggcgcgtg gtcgctggtt ttttcccagg ctcgcggggt gcggtccacg cctgccgcct
     2341 tgagcttcgg cgccagcttg ggacttagca gcgcgtggtc gatgcggatt ccggcgtcgc
     2401 gctcgaacga gcggcgccaa taatgccaga aggtgtagat tcgatcgtcg ggatgtaggt
     2461 ggcggatggc gtcggtccag ccctgcgtga ccagctcggc atatttttcg cgggcttggg
     2521 gcgagaacaa agcgtccttc gcccagcgct cgggcttgta tacgtcctgc tcggtcggga
     2581 tgacgttata gtcgccgatc aggactgcag ggacgtcatt gtcgatcagc tcctgcgcgt
     2641 agtcgcaaag ccggtcgagc caggcgagct tgtaatcgaa cttcgggccc ggccagggat
     2701 tgccgttcgg agcgtacatg ttgccgacga ggagcccgca gaccgccgct tcgatgtagc
     2761 ggctttggcc cgtgtcggga tcgcggggaa ggcagcgccg ggtctcgtga agctcgccaa
     2821 cgcggctcag cagcgcgacc ccgttccagc ttttctgccc gtgccagatc gctgaatagc
     2881 ctgccttctc gatggcgtcg gcggggaatt tctcgtcagt cgtcttgagc tcctggagac
     2941 cgactacatc gggccggaac tcgtcgagcc agcgaagcag gatagaaagg cggctggtga
     3001 tcccgttgat gttgtagctg gcaatccgca gtctcttttt cttggccatg gatgacggaa
     3061 cccccggcgg ggaaatccgt tctaccgacg tgctccagat cccgggcgcg tccccgtaaa
     3121 gcgggtcgcg gatgaaaatc cccgatagct tccggcgatg cagtcaggcg gatcaggaaa
     3181 gcacgggagc cccgacggcc gtccggtcgc cggggctctt tctttgcgcg ccgacgccgc
     3241 ggttgcagcc aatcggccgc taacccattt tcctcactca ggcccgcccg ggccatggac
     3301 atttccgttg cggtgggaga acgagagcgg cgatggcgtt ggacctgtac cagaggctgg
     3361 ggctgaagcg cggcgcgagc gaggccgaga tcaagaaggc gtaccgcgcg ctcgccaagc
     3421 agcttcaccc cgaccgcaac aaggacaatc ccgacgcggc caagcggttc ggcgaggtca
     3481 cccacgccta cgacatgctg tccgacaagg acaagcgcgc ccgctacgac cgcggcgaga
     3541 tcgacgagga gggaaatccc aagatgccgt tcggcggcgg cttcggcggc cattcgggca
     3601 gccgccccgg ggctgggaga ccgggcggac ctagcggctt cgaaggattc cagacggaat
     3661 tcggcgacgc ggccgacatc agcgacctgt tcgaggggct gttcgggggg cgctccgccg
     3721 gcgccggccg cggcgggttc ggcggctttc gccagcgggc gcgcgcgccg cagaagggcg
     3781 ccgacatcgc ctatcgcctg aaagtttcgt tcgtcgatgc agcgaagctg gcaccgcagc
     3841 ggatcaagct cgccgacggc aagaccatcg acctgaagct tcccaagggc gtcgaggacg
     3901 gaactcggat ccggctctcc ggcaagggcc agcccgggcc ggccggaccc ggcgacgcga
     3961 tcgtcacgat ctcggttcag ccgcacccct tcttccggcg cgacggcaac gacatccgcc
     4021 tcgacctgcc ggtcaacctc aaggaagccg tccttggcgc gaaggtgaag gttccgactc
     4081 ccgaaggccc ggtgatgatg acgatcccca agggcagctc gtcggggcgc gtgctccgcc
     4141 tcaagggccg cggcttcacc ggcaagaacg gcacccgcgg cgacgagctc gtcaccatcg
     4201 agatcgacgt gccgtcagga gactccgagc tggagtcctt tgccgagaag tggagcggcg
     4261 gcggcaaccc gcgctcatcg cttggagttt gaaagcgccg caatcgtcgt agtagggcgc
     4321 ccctgaatgc gcgaagtctc tcctctctcc cccgaagcac ggcgaaagcg gcttgcaagc
     4381 gcgagcgcgg ccttcggccc cgatgtcgcg actcggctaa agccgaggca ttacgtctgg
     4441 gaagtcgtca agcgggttgc ggtcggcgtc tacaacgacg gcttcatcca cgccggcaac
     4501 ctcgcctatc tgtcgatcct ggccctgttt ccgttcctga tcctggccgc ggcggtcgcg
     4561 catttgatcg gccaaagcga agatgcgcag ctcgccgttg cgaacctgct cgcgcggctt
     4621 ccgccgaacg tcgccggaac gctccgagcg ccgatcggcg aagtgctgga ggcgcgaacc
     4681 ggcctgctgc tgtggttcgg cgcaatcatt ggactgtgga ccgcgggcag cttcgtcgag
     4741 acgatccgcg acatccttcg gcgggcttac ggagtcaaat atagcgcgcc cttctgggag
     4801 taccggctcg gctcgatcct ggtgatcctc gccgctgtgt tcctgttgat gatcgccttc
     4861 gcggcaagcg tcgccttgag ctcgctgcac gcggtgctgg tgcaatggtt tccgttcgcc
     4921 gaagggatcg gcaggacgct gggaatctac cgcctggtac cggcggcgac gatgttcctg
     4981 actttctacg ccttgttcta cgcgctgacg ccgcttcgct accgaaagca cggatgccgc
     5041 aaatggccgg gagccttgtt cattacggcc tggtggctgg cgaccgtcga gctcttgccc
     5101 caggtcctct cgctcttcgg cggctacagc ctcacttacg gcagccttgc cggggtcatg
     5161 gtcgcgctga tcttcttctt catgatcggg cttggcgtcg tgaccggggc ggagctcaac
     5221 gccgctctgg cggactatga gccgactgcc ctaaagggcg aaatctacag cgggccgttc
     5281 aaggacgagc tcgaagtcga agaattgtcg cccggcgagg acgtcgaggc ggtgcttgaa
     5341 ggagagcccg agctttgact ggattgatga agggcaagcg cggcctcatc atgggccttg
     5401 ccaacgaccg ctccctcgcg tgggggattg ccaagtcgct cgccgaccag ggggccgagc
     5461 tggccttctc ctaccagggc gaggcattgg agaagcgcgt gaggccgctt gcggagcaac
     5521 tcggctcctc cttcctgctc gattgcgacg tcagctcgga caaggctctc gacgattcct
     5581 ttgccgagct gaagacgcgc tgggacagcc tggatttcgt cgtccacgcg atcggctttt
     5641 ccgacaagaa cgagcttcgc gggaaattcg tcgacacgac cctcgacaat ttcctgctga
     5701 cgatgaacat ctccgtctac agcttcatcg ccgtggcgca gcgcgcgcga gcaatgatga
     5761 agcccggcgg atccctgctt actttgagct attacggcgc ggagaaggtg atcccgcact
     5821 acaacgtgat gggcgtcgcc aaggcgggac tggaagccag cgtcaaatat ctggcgatgg
     5881 accttgggcc cgagggcatc cgcgtcaacg caatttcggc gggaccgatc aagaccctgg
     5941 ccgcaagcgg catcggcgat ttccgctaca tcatgaagtg gaacgaatat aactcgccgc
     6001 ttcgccgcaa cgtcaccatc gaggacgtcg gtggcggcgc gctctacttg ctgtcggacc
     6061 tcgccagcgg agtcaccggc gaaatccacc acgtagatgc cggctacaat gtcgtcggga
     6121 tgaaggccga ggacgctccg gacataagca ccgtctgagc agcgggcgcc ggggctaggc
     6181 cgccgccctc ttccaccagc gccgcttgac cggtcccgac ttgagcaccg tacggcggaa
     6241 caggcgtgcg gaaacgaaca ccacgagcgc gatccacgcc gcctgccaga gtatcgcgag
     6301 caggtgcggc cacagctcgg gctcttccgc ggcgcgcgcg accatcacca gcggcgagga
     6361 gagcgggaac agcgctccgc cgatggccat ccctgaattg ggcgagccga cagcgagcgc
     6421 ggcaaaaccg aagatcagca cctgcgccac cgtcaccggc atcgacagcg tctgcacttc
     6481 gcgaacggtc gaggcctgcg cgccgatgct gaggaagacg gagccgagca gcaggtagtt
     6541 catcgcgaaa tagatcaccg tcagcacgac gaacgcaccc gttccgaccg ccggttcggg
     6601 aatcgacgcc gttccaccag ccatgaacat cgacagcgcg gcgacgccgg ctgcgatcca
     6661 caccacgatt ccgacgagcg acgtcgcaag catcgcgaac agcttgccga cgaagatcga
     6721 ctcgatcgga accgctgccg cgagcacttc gatcaccttg ttcgatttct cctcgatcag
     6781 ctgggacagc gtcattccgg cgaggatgat ggtcaggaag aacaggatca tctgccccgt
     6841 ctgggcagtg atcgtacggc tcctggtctc ggacccggtc gagcgctgcg tcgtcgtgac
     6901 ggacaagggt ctcgcttccg attgcgccga atcgagcagc atcgccacct ggccggcgac
     6961 cgcgccgcct tgatcgaccg cgccggtcag ctgcggctcg tcgggagcgc cagtcaggac
     7021 cgcaacaaca ggtcgctccg tcgaccggag caggtcgcga gcctgtgcct gcgggtcgcc
     7081 gctcggcacg acgccgatta tctcgatcac gcgccgctcg tccatcgcct cggtgagccg
     7141 cacatgggcg gcggcaagct tttcgaactc cgccgccgga gcgacgaccg cgacccgcgg
     7201 ctgctccgtc tggctcgcga catgggctcc gatcccgccg aacaggccgc cgagaaggac
     7261 cgggaacaaa ggcccgatca ggaagaagat gaacgccttc gaaaacaccg tcgcagtgaa
     7321 atcgcggcgg ccgatgaccc aggcggagcg cagaagctgc ctcattgggg agtctcctcg
     7381 gccattgcct ttgccgccgc atccccggcg attgcgacga aagcgtcatg aagccccggc
     7441 cgctcgatcg cgagggtttc gattcccgca ccgccgtcaa tcagcgcctt gagcagcggc
     7501 tcgggcccgc ttgccggaag ctcgaatacc cattcgccgc cttcgcgacg cgcaccatcc
     7561 ggaattgcgc tccgccactg gccatcctcg tcgcgggtcc gcagccggac gatcgggcga
     7621 agcttcgccc gggcggtgtc gacggcgcct tcgaacgcca cccgcccctt ggcgatgatc
     7681 gcaatccgct cgcaaaggcg ctcggcatgg gcgatgacat gggtcgagaa gatgacggta
     7741 acgccgccgc gcgcctcgct tctgatcagc tcctccagcc gcgcctggtt gatcgcgtcg
     7801 agcccggcga acggctcgtc aaggacgatc agccgcggct tgtggacgat tgtgcccagc
     7861 agctggacgg tttgcgccat ccccttggac agcgtccgta tcggcttgcg cgcccagtcc
     7921 cccaaccgat gttcggcgag caattcgtca gcccggcggc ggccctccgc cagcggaagc
     7981 ccgcgcagcg cgcccatgaa ggcgatcgcg tcgcggcagt gcatcgccgg gtaaagcccg
     8041 cgctcctcgg gtaggtagcc gatttcgggc gccgcatcga tcggccggga acgcccgagc
     8101 acggagcggc tcccgctcga ggggtcgatg atcccaagca gcatcctgag cgtcgtcgtc
     8161 ttgcccgccc cgttcgggcc aagcaggccg tagatcgacc cagtcggaac cgccaggctg
     8221 accccgtcga cggcgcgcgt atcgccgaaa tccttgacca ggtccttggc ttcaagcgcg
     8281 cattcgccag gtcgcgattg ccgggatggc tgtcgaagca acggaattcc ttagagaaac
     8341 ggagattaag aggctattgg cgcggccgtg gatagaggcg aagacctgaa ggaagcaata
     8401 agcgcggagg cgaagcggct cggcttcgtc acctgcggct tcgcgcgcgc cgattcggcg
     8461 ctggaggccg gagcggacct gatgcgctgg cttgccgacg gccgccacgg ggcgatggaa
     8521 tggatggagg cccgcgctca ccagcgggtc gctcccacgg cgttgtggcc ggaggcgcgc
     8581 accgccatcg cgctcggcat gagttatgcc cccgaaaccg atccgctggc gctggccgat
     8641 gacggctcgg ccggccggat ttcggtctat gcgcagggcg gcgactatca caagaccgtc
     8701 aagaagcgct tgaaggcgct cgctcgatgg ctcgtcgaca agtcgcaatg cgagctcaag
     8761 gtcttcgtcg acaccgcccc ggtaatggaa aagccgctgt ccgcctcggc cgggatcggc
     8821 tggcagggca agcacaccaa cctcgtcagc cgcgagcacg gaagctggct gtttctcggt
     8881 gtgattctca ccaccctcga cctggagccg gatgcacccg cgcgcgacac ctgcggcaga
     8941 tgcacccggt gcctcgactc ctgcccgacc ggcgcattcg acggtccgcg acggatcgat
     9001 gcccgcaaat gcatctccta cctgaccatc gagcataacg gcgcaattcc cgtcgaattg
     9061 cggcgaccga tggggaaccg aatctacggc tgcgacgatt gcctcgccgt ctgcccatgg
     9121 aaccggtttg ccgacgccgc ggcggccaac caggccttcc ttccccgcga ggagctgaag
     9181 gcgccgaagc tggaggacct gctgtcgctc gacgacgctg cgttccgcga gaagttcgcc
     9241 ggctcgccga tcaagcggat cggggtcagg cggatgatcc gcaactgcct ggtcgccgcc
     9301 ggcaacagct gcgatccgaa gcttattgaa tcagtcggcc gccacctgga cgatgacgat
     9361 gaggtgatcg ccgaggccgc ccgctgggcg atggcggagc ttcagggcga gtcgagcgag
     9421 tcgatgcaaa gcgcctgatc gatttcggcc agtgagcgcg tgcgggtatc gacgtaggtg
     9481 acccggtggg gagcggtgcc gctggggtag agataagcgt cgagcacgca ctcacggctc
     9541 cggaattgca gcttcaggct ctcgccttcg cgaatctgca gtgccggcgt cccgaacctg
     9601 ctcaccagct cttgcgccgt aagcccgatg atctcgccgc gcgtatgcgc tgacggcggc
     9661 acctgctcgg gctgggccgg ccttggcgca gtggcgcagg ctgcgagcag cagcgatgtg
     9721 gagaggacga ctagccggcg catcgccaat ccatggcggc accgcttcgc cggtgcaagt
     9781 tgcggcggag cgttcgcgcc gctaggcgcg cccgatgacc aacaaagctg tggatgtgct
     9841 ggcgatcggc aatgccatcg tcgacgtgat tgccgacgcc ggtgaggaat tcctcgacga
     9901 gcagggcctc gccaagggct cgatgcggct gatcgacgag gccgaggcgg agcggctcta
     9961 tgcggcgatg gggccgggcc gcgaagtcag cggcgggtcg gcgggaaata cggcggccgg
    10021 gcttgcagcg ctcggttgcc gggccgcttt catcggccag gtcgcggatg acgagctcgg
    10081 tggcatctat cgccacgata tcgagagcat gggcatcgat tttgtcgtcc cgccgcggag
    10141 caacgtcggc gccaccgccc gctcgctgat cctcgttacc cccgacgctc agcgaacgat
    10201 gaacaccttt ctcggcgcgg cccagaaact ggagcgcagc gccatcgaca gcgccgtggt
    10261 cgaaagcgcg cgcatcttat acctcgaagg ctatctgtgg gatcccgcgc agccgcgcgc
    10321 tgcaatggaa gcggccatcg acatcgccag gtcggccggc acgaaagtcg cgttcacgct
    10381 ttccgacagc ttcgtggtcg aacgccaccg cgacgacttc ctgcgcctta tcgaccatgg
    10441 caagatcgac atattgttcg ccaacgagca ggaattcctg cacctcgccc acggcaccga
    10501 tctcgattcc gcgatcgccg aattgtcgcc gaaggttccg accctggtcg taacccgaag
    10561 cgagcacggg gcgctcgcct gttgcggcgg ggagcgcgct caggtgccgg ccgaaccgat
    10621 cgagcggctg gtcgacacga ccggcgccgg cgacctgttc gccgcgggat tcctcgccgg
    10681 ccaggtgcgc ggcaggacgc tcgaggagtc gcttcggctt ggcgcgatct gcgccgcaga
    10741 ggtgatccag cattacgggg ccaggccgga gctcgacctc gcggcgctcg ccgcgccgtt
    10801 gctcaaatag gaaaagggcc ccgccgcttc cggcgaggcc ccctcccctc tgtctttagg
    10861 ttatccgcgc tctggcgccg caggcggcgg cggcggaggc ggcggcggaa cggggcagga
    10921 atccgttgcc aggatggtcg ttccgtcggc gcagacctgg gtcgccggag cctcgaccac
    10981 cggcgccgga gcggccggcg ggggcagcgg cggggcgggc ggcggcggcg agaaagccat
    11041 ccggaacgtc gcgccgaacg tccgcggctc gccgaggaac gcgccgaaca gctgcgtcga
    11101 gcgatcatag aagccggcag ccgagccctg ttcgacaccc cgctgcgtcc cggacccctg
    11161 aacgggagcg tcgaacgcga cctgaaccgt gtcctcgtca aacaggttct gggcccagaa
    11221 ttccagcgac caggcattgt cgcggccgcg gataccgatc cgggcgttga cgaccgtgaa
    11281 cgcttcctgg aacttctcga ggtcaagatc cgagccggtg ttgaacccgc tcatgtgacg
    11341 gacgtccgcg tagacaagcc cgctaagacc ggtgtttccg atcggtgggg tccaagcggc
    11401 agcgccggtc aacgtccact cgttcgagtt ggacactcgc cgtcccggca gctggaacag
    11461 ggcattggtc aacggccgcc cgtcggcacc gacgagccgc ctgcgatact tggtgtcggc
    11521 gtaagtcacg ccggcattga ggtcgaggta ccgcatcggg cgagtgaaca attcaatttc
    11581 gacgccctgg ctgcggactc cggctttggt cccgccgctg cacgagccgg taaacaggct
    11641 gttgtccgtg tcggtatcgg gcgggtccag ctcacccttg caggaattga tattttcgac
    11701 gacgaaattg aggccgttga aggtgttgag ctggaagttc tcgaacagct cgtggaagac
    11761 cgcgacgttg aggtcgaagc cgcggccgtt gtacttcgca ccgatctcga acgcatcgac
    11821 cgtctcgggc ttgaactgca gatcggctcc cgaagccatc cggccctggc agttcgtctg
    11881 ggtttcggtc gtgcagatcg cgcccgttcc gcctaccggg aagggaggcg gtggcacggt
    11941 gggggcgaat gcccgccaga gcgcagcccg gtcgaggttg aagccgccgg ccttatagcc
    12001 gcgcgaatag cttgcgtagg tcagcagctc gggtgtcggc ttgtagctta ggacggccgt
    12061 tcccgagaat ttgttctcgg tcctgctgtc gctgaaagtg aatgggcccc cgcccggaac
    12121 gctgggaacg aagacgcagg gcagctgctg aagcgccgca acgaaagtgg agtagaaggt
    12181 acacagcgtg ttgttgtcgg acaggcttgc gtcgatcgac ttcttctcgt gcgtgtaccg
    12241 gactccgacg gtcagatcca agccgggcgt aatctcgaag atattgtggg tgaacagcgc
    12301 ccagttgttg ctcttgtgtt tccactcatc gtcgagggcg accccggcga gcgattgccc
    12361 cggaaggccg agggcggtcg ccaggttggc aaagccgctg tcggtgaacg gagctccggc
    12421 gaacgcccca agccgcgcga aggcggcaag cgctgtagcg ttcgctccgg cgaagggaag
    12481 cagcccgccc gctgatgcgg ggtcgaggca ggtcggattc aaggggttca ccaatgtgct
    12541 gccgagcgcc gcgagcgcgg gcactccgga attgatgaag cttgaggcga aattcgcccc
    12601 gacgacgcag ttgaaatatt tgggcaggtc ttcgccatag gtgacgttat cgatgacgcg
    12661 cagccgctcg ttcgcgagat atgcgccgac cagccaatcg agcttcccgc cgaaggcctc
    12721 gccgttgagc ctgagctcct gcgagaaagt cttgaagcgc gcgcccgacc cgccgtcgct
    12781 gggacgatag aagatatcga ggttgttata gtcgatatcc tgaccacggg tgaggttgtt
    12841 gaaacggtag gcggtgatcg acgtcagctt ggcgcccccg aagtcgtaat tgacctcgcc
    12901 cgacacgccc cagtctctga ctttgttttc aaaatcgcgc ccgggcgtga tcgcgacgtc
    12961 gcgctcgaac ggatcgtcgt tgatgcttgc gcccatgccc cgcaatatgc cggcgaaagt
    13021 cgatggttgc gggcccgccg ccgtgaagtc gtgcgcgggg agatagactg ccgcgcagca
    13081 ttcttctttt ctgcgcgtgt agtcggcgac aagccggacg gacagatcgc tgctcggttc
    13141 gaacagcagc tggccgcgaa gaagccagcg gttgcggtca ttgacgtccc ggccggagat
    13201 gacgtcctca aggaatccgt cgcgcttcat ccagactccg tcgagccggg ccgcaagcac
    13261 gggcgtgatc ggccccgtcg cgctggcttc caggcggcgg aggtcataat tgccgaccgt
    13321 gaccgcgccg ctgatctcag attcgaatct cggctgcgcg gtaatgatcg aaatcaggcc
    13381 ggccgacgtg ttgcggccga acaatgtgcc ttgcgggccg cggaggatct cgatccgctc
    13441 gagcgggccg agctcggtga gccccatgcc ggttcgcgac cggtaaacgc catcgatgaa
    13501 gactccgacc gaactttcga gtcccggatt gtcgccaacg gtgccgatgc cgcgaatacg
    13561 ggcgactgca agaccttcgg actgggtcga cgataccagc agcgacggcg acagctggtt
    13621 gagctggcga atatcggtcg cgccggaatt ctgcagattg tcggcgctga ctgcgcttac
    13681 cgcgagcgga acgtcggaaa gagcctggtt gcgtcgagtg gcggtgacca ggacgttgcc
    13741 gctgtcgacc ggttgcggag agacggccgt gtccgcaacc gcgccctgac ctgcagtgtt
    13801 cgcctgatcg atttcctctt cgccctcggg acctgtcggc tgagttggtt gacccggatc
    13861 ggcctgctgc gcgtaaagcg gtgcaggaaa cagaagcgcc gcagaaagca gccaaatcga
    13921 tttgcgcatg atgccctccc gaggcccgca gttgagaggg cctgctaagc gaaggctaat
    13981 gcacgtcagc cggagacgga aggcaggggc gtaacgaaac cgcgaatccg caattgttgc
    14041 tgcaaaattg caacagcatc cttcggtagg tgagacgccg caaagcgacc gatggctatt
    14101 tcggagcgag caccatgagc atctggcgac cttccatgcg cgggtgcgcc tcgatcttcg
    14161 ccaagtcggc ggtttgctcc tggacccggc ggagaaccgc cattccaagc tcgccatgcg
    14221 ccatctcgcg gccccggaag cgcattgtga ccttcacctt gtcgccgtcc tcgaggaact
    14281 cgaaaacctt cttcatcttg gtgtcataat cgtggtcgtc gatgttggga cgcatcttga
    14341 tctccttgat ctcctgcgtc ttctgcttct tgcgctgctc gttcgccttc ttctgcgcct
    14401 cgtatttgta gcggccgatg tcgaggaact tgcagaccgg cggatcgacg ttcggggaaa
    14461 cttcgacaag gtcgagcccg gcttcggcag cctgctcgat cgcttcgcgc gtatacatca
    14521 cgcccaagtt ttcgccgttg tcatcaatga cccggacctt cgggctctgg atgaattcgt
    14581 tgtagcgggg gccggaaaat tgcggcggcg tctgcggacg gcgcggatag ggcggtggta
    14641 tagctttctc tccagtaagt tggttcgcga agtagcgaat taggcgttcg cccgccattt
    14701 gaaaaggctg gcggcaccgg ccagccgcag ttttgcagcg ggcgcggccc gacgcgtgtc
    14761 aacgggcgag atggattagc ggatagggcc ttccttgagg atcggtcggc gaccggccca
    14821 cgatccgaaa gccgcgagct aaatagaaag gcaaggcgtt ggtggcctgc tcgcttgcgt
    14881 cgacagtcgc atcgggcgca agcgacagcg catggtcgag aaggaaggtg ccaacgcctc
    14941 ggcggtggtg cgcaggatcc acgaaaaggg catcaatcgc ctggccgtcc atcaccagga
    15001 acccgagcgg atggtcatcc tcgtcgaccg cgaggatgag gtcggcattg ggcaggaatt
    15061 cgttggcgac catcgcgtcg atcgcggcgc ggtcctctgc cgagaggaag ccatgtgtgg
    15121 catcgaccgc atctcgccag atctgcaacg cgcgcgaaag gtccgctggc gcggcggcac
    15181 gaattctcac ttgatatcgg gcggcgtcga ctcagcggcc agcatcgcca ccgcctcgtc
    15241 gaggctcatc gcgacctgcc gctcctcgct gccaaggcga cgcagcgcca ccgtgccttc
    15301 gtctgcctcg cgcttgccga cgacgaggag cagcgggacc ttagccagcg agtgctcgcg
    15361 caccttgtag ttgatcttct cgttgcgaag gtcggtctcg acgcggattc cgcgcgccgc
    15421 cagcttcgcg gccacgtcgc gcgcataatc gtcggcgtcg gagacgatgg tcgccaccac
    15481 tgcctgcacg ggcgccagcc acagcgggaa cttgccggca taatgctcga tgaggatgcc
    15541 gatgaagcgc tcgaaggtgc cgagaatcgc ccgatggagc atcagcggcg agtgcttctc
    15601 tccgtcggcg ccaatgtagg tggcgtccag tcgcttgggc atctgcgggt cgagctgaag
    15661 cgttccgcac tgccaggtcc ttccgatcgc gtcctgcagg tggaactcca gcttcggacc
    15721 gtagaaagct ccctcgccgg ggagaacttc atagtcgagc ccggtctcct tcagcgcggt
    15781 ctcgagatcc gcttcggcgc ggtcccagtc ctcgtcgctg ccgattcgct gctcgggccg
    15841 agtcgccagc ttcacctggt aatcggcgaa gccgagatcg cgataaacgg catcgagaag
    15901 cgcgcagaag ctcttcgtct cctcgaccag ctgctcgtgc gtgcaaaaga tgtgggcgtc
    15961 gtcctgggtg aactggcgga ctcgcatgat cccgtggagc gcgccgtggg gctcgttgcg
    16021 gtggcagcag ccgaactcgg cgagccggag cggcaactcg cgatagctgg tgatgccctg
    16081 cttaaagacc tggatgtgcg ccgggcagtt cattggcttc agggccatta gctccgcgtc
    16141 gccggtgatc accggttttc cgtcctcggt cgccggaatt tcgtccggca ccacgaacat
    16201 gttctcgcgg aacttgcccc agtggcccga cagcacccac aatctggaat cgatcagctg
    16261 cggggtcttg atctcgcggt agccggccga gtccagccgg cggcgcatgt aggcttccag
    16321 ctcgcgccag atgatatagc cgttcgagtg ccagaagacc gagccgtgcg cttcggcctg
    16381 gagatggaag aggtccatct cctgagcgat cttgcgatga tctcgcttgg ccgcttcctc
    16441 cagccggacc agataggcgt cgagctgctt cttgttgagc caggcggtgc cgtagatacg
    16501 gctcaacatc ggattcttgg ggtcgccgcg ccagtaagcg cccgataccc gggtcagccg
    16561 gaacgattgc gggtcgagct tgccggtcga ggcaaggtgc gggccgcggc acaggtccat
    16621 ccaggcgcct tcgccctcgc cggtgcggta catggtgatc gcctcgcctt ccggcagttc
    16681 catcacccac tcggccttga acgcctcgcc ctgtttctcg aagaattcgc ggacttggtc
    16741 gcgggtccag acctcgcggc acagcggctt gtcggcggcg atgatccgcc gcatctcctc
    16801 ttcgattgcg ggcaggtcct cctcggtgaa ctgcccgcgc tcggccggcg gcgcgaagtc
    16861 ataatagaag ccgtcctcgg tcgccggccc gaaggtgatc tgggttccgg ggaaaaggtt
    16921 ctgcactgct tcggcgagga tgtgggcgaa gtcgtgacgg accagttcga gcgcctcggc
    16981 ctcgtcgcgc gaggtcacca acgcaaggct ggaatcgctt tctatcggcc ggttgaggtc
    17041 gcgaagctcg ccgtccaccc tggcggcgag cgcagccttg gccagccccg gcccgatcgc
    17101 cgcggcgacg tcggccgggg tcgagccctc cggtacttcc cggaccgaac cgtccggaag
    17161 cgagatcttg aacattttcg tcattcgcga gccatgtagc ggcgcgccca cagctgctca
    17221 actagggaag tcgatcgatc gcgacggagg ttttgacaag gtgacttgac aggcgacatg
    17281 tcgctgatgt aaagcgtgct tgtcatttag ataaggatgc ttgaccaatg aaagggaata
    17341 atccggcgtt tcgccgctac acttggagcg tgatgctgct gatgacggcc tatgtgctcg
    17401 tcctgatcgg cgttaacctc tacttcgaca acagcgcgcc gactggggct gctgcctatg
    17461 ctgccgccat cctgccggcg cttccgatcg tcggcgtgtt catcgtcatc ggccggttgc
    17521 tggtcgacct caggagcgac gagtatgtgc ggatgctcct ggttcgccag acactggtcg
    17581 ccaccgcgtt cgcgctgacc gtcgccacgg tctggggctt ccttgaaggc ttcgacctgg
    17641 cgccgcacct ggaagcctat tggttcgcag tcctgtggtt cggcgggctc ggcgtcggcg
    17701 gctgcgccaa cgccttcctc gagagccggg gaggcggaga atgaacaatc atttgcgcgt
    17761 gttgcgcgcc gagcgcggct ggagccaggc cgacctcgcc gaacgtctcg aagtgtcccg
    17821 gcagagcgtc aacgcgatcg agaccggcaa gtacgacccg tcgcttccgc tcgctttccg
    17881 gatcgcggag ctgttcggcc tttcgatcga agaggtgttc gtgtcgcctg ctcatcaaag
    17941 ctcgcgggca atctagttga ggcccgcgag gctcgggaaa gaaccgttaa ttgcgcgcgt
    18001 aaacggactt tgaatgtgct agtctggcgc tgctccgagt ccggagcgtc agtgctgatc
    18061 gaacaggggg accaatcgat gattaggaag ttccttaatg cgtcagtagc aacggccgta
    18121 atcgtcagtt cgatgacacc cgcgatggcc cagtccagtt tctcttcgga catgcaggca
    18181 cctcttgggg ctactgcgac ggtcaatttg agagtgccgc tgggtgccgc tccgaccaag
    18241 caacgcaagg caacctacgg gctgaccctg ggttacggac agcagacgga cggtctgacg
    18301 tccgacggcc ggatcgcgac acgtcaagcg aagttcgcgg acatccggtt cactggcgcg
    18361 ttcaagctca ggcgcgccga agtgatgacg ttcgacctgg ccaatctcga caaggatccg
    18421 cggctcaaca t
//
LOCUS       DATAKH010000183        17687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_3649,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000183 DATAKH010000000
VERSION     DATAKH010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 17687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17687
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3649"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..505)
                     /locus_tag="VHN55_07595"
     CDS             complement(<1..505)
                     /locus_tag="VHN55_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803825.1"
                     /translation="MQLRNWEDFVQVDADGRFVDTTAKDYSGFLEARLGDILAQGSVI
                     ESHPGGALGGSLGTEQGDFIEVEMVAGQTYTFSYRGTDVGGIVDPYLVLFNAGGVYVT
                     EDDDGGYGRTSQITYTATQTGTHYLFASSWYHLDPSAPGYPTADTGNYTITQWSPVAG
                     HDAGNTIA"
     gene            570..1025
                     /locus_tag="VHN55_07600"
     CDS             570..1025
                     /locus_tag="VHN55_07600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803826.1"
                     /translation="MVYKWLQMLLFFGGEHCIKATHEGDCRVASLDGTLAPMAVMLMV
                     TAACGTPSAPADPVSANSTIAADGGGGIVSDQVPINQRFRSLDEYLAFLERTQAPVDG
                     PWYRQIRPDLFELVSGNMRVVGSLGEKQPEQQKHLFTREELEKKYGFAE"
     gene            1085..2899
                     /gene="cobT"
                     /locus_tag="VHN55_07605"
     CDS             1085..2899
                     /gene="cobT"
                     /locus_tag="VHN55_07605"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010214964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HEX2803827.1"
                     /translation="MAEVVPLDLFRRALAGATRAIARDPEVDVVFASDTASPAGRAAR
                     VPSPGPGLEPKLVAEARGAADSAALRLRHHDSRLHASLAPADPEARAVFDALETSRIE
                     ALGARAMGGVRANLAELAEARVRGDAIVRARSAEEVPLATAVGLIARERLTGEPPPKA
                     ARSGLKLVEPWIEEKASADLDSLALTLDDQAAFAKLSRRLLEDLDLAAAVEEGEDLDQ
                     EAGEDEGDEAAGDEGEDDGESVPQDGGSEMRAEQSDDSGEDEQSADDYEAGEDQLAER
                     EQTTDSGQPGQARRNWELAPPTDYKAFTTRFDETIEAGELCDEAELNRLRAYLDQQIG
                     GLHSVVTKLANRLQRRLMAQQARSWEFDQEEGLLDSARLARVVVNPIHSLSYKVERET
                     EFRDTIVSILIDNSGSMRGRPIAIAAICADILARTLERCGVASEILGFTTRAWKGGQS
                     REAWLAAGRPGHPGRLNDLRHIVYKRADEPYRHAKRHLGLMMREGLLKENIDGEALLW
                     AHQRLIARPEERRILMVISDGAPVDDSTASANGGTYLERHLRQVIGWIEQRSPVELVA
                     IGIGHDVTRYYDRAVTIMDAEQLGGAMIEQLARLFESP"
     gene            complement(3120..3416)
                     /gene="rpmB"
                     /locus_tag="VHN55_07610"
     CDS             complement(3120..3416)
                     /gene="rpmB"
                     /locus_tag="VHN55_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEX2803828.1"
                     /translation="MSRVCELTGKGRQVGNNVSHANNKTKRVFLPNLQDVTLISDVLE
                     RSVKLRVSTHGLRSVEHVGGLDNWLKKTSDDKLSPAARKLKREIVKKLAQSEAA"
     gene            3575..3862
                     /locus_tag="VHN55_07615"
     CDS             3575..3862
                     /locus_tag="VHN55_07615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803829.1"
                     /translation="MRAILLILILAVVVLLIAFATGLLDIRQTRGARAPDIDVNSSGV
                     TARGGQTPTFDIETGTVAVGTESRNVKVPTVRVDSTNEVNQQAENVTANAE"
     gene            3931..4362
                     /locus_tag="VHN55_07620"
     CDS             3931..4362
                     /locus_tag="VHN55_07620"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010235478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX2803830.1"
                     /translation="MRRALDLAAEAAAADEVPVGAVVTRGEEVIAESRNAMRGSLDPT
                     AHAEVVAIRAAAEALGQPRLDDCTLWVTLEPCAMCAAAASVARLKAIRYAADDPKGGG
                     IAHGARIFAQPTCHHRPDVLGGIGEAESAALLKRFFEDRRG"
     gene            4419..5759
                     /locus_tag="VHN55_07625"
     CDS             4419..5759
                     /locus_tag="VHN55_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX2803831.1"
                     /translation="MSDQLLPFPWLDVLIILALILLNGVLAMSELAVVSSREARLKAL
                     ARSGSSGAKCALELASDPGRFLSTVQIGITLIGILAGAYSGTSLGGPIAQRLQLVGLD
                     PETARIVGFSIVIVIVTYLSLVAGELVPKQLALRSPEPIAAVVAKPMRWLSWIAAPIV
                     WVLDRTSALLFRLVGLKRESENSVTAEELHLVVAEAQTAGVLEESERAIISGVVRLAD
                     RPVREVMTPRTDVDWIDVSASGDDLRSALKETPHSRIPVADGSVENIIGVVQTRDLLE
                     AMLDGRDLNLHHMVKAAPVIPDLMDAMDALAVLRSAEVPLALVHDEYGHFDGIVTPGS
                     ILAALAGVFHHDIEEGEEPDIVEREDGSYLLSGAASADILTDRLGIHLPADRDFSTVA
                     GFALEQLKHLPETGETFRHDHWSFEIVDMDGRKIDKLLAVRTKRKKPRQETEAG"
     gene            complement(5756..6250)
                     /locus_tag="VHN55_07630"
     CDS             complement(5756..6250)
                     /locus_tag="VHN55_07630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803832.1"
                     /translation="MEFASEYWPLILIAVAIVLVAAYLLLRPRQRVQLSQSDAPVRPH
                     MQANTGHVNRGLAGEAATAVGDVSGQIFSAPIQENLPGASGPPDDLTRLKGVGPKFAA
                     LLNQLGITRFEQLARLSEGNLDRLDEHLGPFKGRLQRDQVPLQADYLARGDEDGFEQR
                     FGKL"
     gene            complement(6256..6747)
                     /locus_tag="VHN55_07635"
     CDS             complement(6256..6747)
                     /locus_tag="VHN55_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803833.1"
                     /translation="MNPLWSYFWPLFALGLLLGGLAGSIWLRRKRRLALLVGAAVALA
                     GSALWHGPVGAADRFAATVDRSAQRTLTDFEMSQIEAHLRRGPLSRRLILSGPADDFQ
                     RTELVRIMSATPGVSRATWSTGAGLPLLAEAALASASGFLLGLLLAYLVELHRRHNAQ
                     WKW"
     gene            complement(6744..8003)
                     /gene="purD"
                     /locus_tag="VHN55_07640"
     CDS             complement(6744..8003)
                     /gene="purD"
                     /locus_tag="VHN55_07640"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010185705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEX2803834.1"
                     /translation="MNILLLGSGGREDALAWRLRQSPSCEALIAAPGNPGIARWAECA
                     ALDPCDVEAVVELAGKRAIDLVVVGPEAPLVAGVGDALREAGFAVFGPNAAAARLEGS
                     KGFTKDLCEANAIPTARYVRTDSAGAAAAALDDFGTPVVVKADGLAAGKGVTVAATRE
                     EAEEAIRAIGDSPLVIEEFLEGEEASLFALVDGETAIPFASAQDHKRVGEGDTGPNTG
                     GMGAYSPAPVLTPELEARAMDEIVRPTARALAAAGTPFSGILFAGLMLTRDGPKLIEY
                     NVRFGDPECEAIMPRVEGDLAELLMSVAQGRLGEIQEPKLSADFAVTVIVAARGYPGT
                     PVGGGLIRELEAAEQVEGVTVFHAGTARGDGGLVARGGRVLAVTAVANTFANARARAY
                     RAVDQIDFADGFHRRDIGWRELEREGA"
     gene            8003..9400
                     /gene="xseA"
                     /locus_tag="VHN55_07645"
     CDS             8003..9400
                     /gene="xseA"
                     /locus_tag="VHN55_07645"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEX2803835.1"
                     /translation="MDLPDDTRSGLLANVPPGDNSPALSVGELAGSLKRVIEGEFGHV
                     RVRGEISGFKRHSSGHCYLSLKDEAACIDAVIWRGNANTLAFKPEDGAEVIATGKMTT
                     YAGRYKYPLVVERLELAGEGALMALLERRRKALAAEGLFDSERKRTLPFLPRVIGVVT
                     SPTGAVIRDILHRLEDRCPTHVVVWPVPVQGEGASAKIAAAIRGFGAIDGAGALPRPD
                     LLIVARGGGSIEDLWAFNEEEVVRAAAESPIPLISAVGHETDTTLIDHASDRRAPTPT
                     AAAEIAVPVRAELFALVDDLGSRSRHCLSRMAERARERLELTACRWPQPQSLFAPAAQ
                     RLDEIGDRLPRALASRAGDARADLNGVAPRLRPELLLDRVARSADKLASLWRLAELAH
                     PERPLQRGFVRVTDRAGKTLAKAADAIAAKLLTLHFGDGDVPAAAGDSAPPVERKRRS
                     SYVSSQPGLFDQAEE"
     gene            9403..9606
                     /locus_tag="VHN55_07650"
     CDS             9403..9606
                     /locus_tag="VHN55_07650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013848005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2093 domain-containing protein"
                     /protein_id="HEX2803836.1"
                     /translation="MLMTGTGTPARVHYMAGTFRVLSNGDHVVCAVTGLRIPLHELKY
                     WSVERQEPYVDAEASLKAEQRIR"
     gene            9882..13097
                     /locus_tag="VHN55_07655"
     CDS             9882..13097
                     /locus_tag="VHN55_07655"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2803837.1"
                     /translation="MAAPAAAQDYTSGVITGTVRTDAGAPIAGATVTARSEQQGWTRS
                     TTTSAAGQFSFSSLPPGDYDVTVQAAGVSNFRADNVQVIAGATSDLPIVMTSATAEGA
                     TGGEVVVVGRLLQAFTGTTTGVNLDVEDLVKTVPVGQNLTSLVLLAPSTNRGDTAFGN
                     LASIGGSSVAENAYYINGLNITNFDNYLGSAEVPFYFYKNVEVKSGGYPAEFGRATGG
                     IINAVSKAGTNEYTGAVHVSWAPDFLRSTERDQETCSSDGTCAPLTNREDDWTDTYSV
                     AVEGGGPIIRDRLFVYGLLEVQKQDWFRAAPASDLGYHYTNDDPFWAVKVDAYPIDDH
                     HLEFTIFDTRNTTRRENQEYLLGADGEYSRGAVVGSQDYNYGGVNFVGKYTGRFTDWL
                     TLSAAYGRMRDRFDIQFVDAGGSAPYYVNASGGTIFGVGPGGAYNGQTTSLYDFPYET
                     QRKFYRADADITFDMFGHHHVRLGVDRENNTLNHATVRPGNSLLCGTGFLSAAACANT
                     GAGAAIIFRNGLAGQDPQVEINYLVSGGGFTARNQAAYIQDEWNVTDRLTLNLGLRRD
                     DFRLNKQDGTVFLESKGNYAPRIGATYEMWPDKSGTLKAFFGQYFLPFASNTAARQAA
                     SELYFRERFYFTGLDANGLPILGAQVTDYPAYNVQCPFGLTPVSSGQNCSVSGAGETP
                     LTTQGTDAGLKATRESEYILGYEHKLNNGWRVGLTGVYRSLDTSAEDVAIDAAARTYC
                     IAEGFAEATCNAIWSGYHQYVITNPGTPMTVALNAENGPFAIPELHNRVVTLDPADLG
                     YPKAKRTYKALEFTFNKPWNEVYSLNGSYTLSWSKGNSEGMVQSDFGQDDAGITQDFD
                     QPGFTEHSYGYLPNDRRHRFKLWGSYALTPDLILGTQIQVMSPRHLSCLGYYPVEDSL
                     ENGYGAASHYCGGVPAPRGTGLRSGWYQQVDLSGRYNLHIGTGQIVTLRADIFNVFNA
                     QAVMQRNEVGEIGFGVANPNYGKPRAYQTPRYVRLGLDIAFGGGIAPPPPPVEVVAPP
                     PPVVEAPATQTCGDGTVILATEQCPAPPPPPPPPPAAPERG"
     gene            complement(13327..15936)
                     /gene="clpB"
                     /locus_tag="VHN55_07660"
     CDS             complement(13327..15936)
                     /gene="clpB"
                     /locus_tag="VHN55_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEX2803838.1"
                     /translation="MDFEKLTDRARGFLQAAQTIAVREHHQRIAPAHLLKALLDDEQG
                     MAAGLIEAAGGDSKAAKREVDALVAKVPAVTGSGATSAPAMDGDTIRVLDQAEQVAKK
                     AGDQYVTVERILLAMTLAKGTDVAKALENAGVRPQGLNSAIEKLRGGRTADTQSSEDR
                     YDALKRYTRDLTQAARDGKLDPVIGRDEEIRRTVQVLARRTKNNPVLIGEPGVGKTAI
                     AEGLAVRIANGDVPDGIKDRRLLALDMGSLIAGAKYRGEFEERLKGVIDEVKQSEGNI
                     ILFIDEMHTLVGAGKSEGAMDAGNLLKPALSRGELHVIGATTLDEYRKHVEKDAALER
                     RFQPVFVGEPTVPDTISILRGLKEKYELHHGVRITDAAIVAAATLSNRYITDRFLPDK
                     AIDLMDEAASRIRMEVESKPEEIENLDRRIIQLKIEREALKKEQDKASKERLDKLEGE
                     LANLEQQSAELTQRWQAEKEKIAGEAKIKEQLDAARLELDQAQRSGDLAKAGELQYGR
                     IPELEKQLGDAQAASEGAMLREEVTDQDIAGVVSRWTGIPVERMMEGERDKLMQMESA
                     IGARVIGQEDAVKAVSAAVRRARAGLQDPNRPLGSFLFLGPTGVGKTELTKALAEFLF
                     DDASAMVRIDMSEFMEKHAVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVVLFDEVEK
                     AHADVFNVLLQVLDDGRLTDGQGRTVDFTNTIIILTSNLGSQFLAGLGEDEAVEKVEP
                     QVMEVVRAHFRPEFLNRLDEIILFHRLGTAHMGPIVDIQIARLQQLLEDRKIRIELTP
                     AAREWLGRVGYDPVYGARPLKRAVQKYLQDPLADALLSGQVRDGQTVRVDEGDGQLVL
                     TPEANGDLSEAAE"
     gene            complement(16008..16673)
                     /locus_tag="VHN55_07665"
     CDS             complement(16008..16673)
                     /locus_tag="VHN55_07665"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HEX2803839.1"
                     /translation="MRTLLLLLTLSGTAAGAQTYNPTERYVIAGQDEPGYRAWYLASP
                     VNPIRVAGLHHYITHYGAGWVLPTWQIIRTASDWRKCNDAAFEVPPTSEWPHIVQTLR
                     FVRDEVIPAVGPVEAVSAYRNARLNECAGGAPGSAHRGFYALDLVPLNETTREQLMRT
                     MCAVHQRRGEAYSTGLGFYPFLRFHVDSRGFRRWLPAGEEASCDPLGEQPHAPEPVEA
                     VVK"
     gene            16724..17041
                     /locus_tag="VHN55_07670"
     CDS             16724..17041
                     /locus_tag="VHN55_07670"
                     /inference="COORDINATES: protein motif:HMM:NF021188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoic acid system family protein"
                     /protein_id="HEX2803840.1"
                     /translation="MGQPIDVDLPHKLGKEEAKRRIGGNIHKLHEQIPGGGNVTSRWE
                     GDTLKLSVAAMGDNINADLTVSESNVHCHFDLPGLLGMFAQPIAAMLKAKGGDLLLED
                     KRD"
     gene            17041..>17687
                     /locus_tag="VHN55_07675"
     CDS             17041..>17687
                     /locus_tag="VHN55_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013833303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2803841.1"
                     /translation="MRHFAVVGSGPGGFYTAEALNKAYGEQARVDIIDRYPVPYGLVR
                     FGVAPDHQSLKAVAKRYDKTAESAGVDFIGNVCVGRDLSIRELLELYDAVVLAIGAPN
                     DRKLGIPGEDLPGVIGSAAFVGWYNGHPEFADLEPPLGGTHAAVIGNGNVALDCARIL
                     SKTRGELSEGDIVGHALDALDASPISAVTILGRRGPLQISMTPKELGELGHLDAST"
BASE COUNT         3008 a         5869 c         5757 g         3053 t
ORIGIN      
        1 tagcaatggt gttgcctgcg tcatgacctg ccacggggct ccactgagtg atcgtgtagt
       61 tgccagtgtc ggccgtggga taacccggag ccgaggggtc gaggtgatac cacgagctgg
      121 cgaagagata gtgagttccg gtctgagtcg cggtataggt gatctgcgag gtacgaccat
      181 agccgccgtc atcgtcctcc gtgacgtaga cgccgccggc attgaacaac accagatacg
      241 gatccacgat tccgccgaca tcggtcccgc ggtaggaaaa agtgtaggtc tggccggcca
      301 ccatctcgac ctcgatgaaa tcaccctgtt cggtgcccag cgagccgccc aacgcaccgc
      361 ccggatgcga ttcaatgaca ctgccctgtg cgagaatgtc gccgaggcga gcctccaaaa
      421 agccgctgta atccttggcc gtggtgtcca cgaagcggcc gtccgcatcg acttggacga
      481 agtcttccca attcctcaac tgcatttaat cgccccctct tggatggaaa cttttcagcc
      541 ggcgaatcgc ggcgaacgcc ctacagaaca tggtttacaa atggttgcaa atgcttttgt
      601 ttttcggcgg tgaacattgt atcaaagcga cacatgaagg agattgcagg gtggcctcac
      661 tcgatggaac tctagcccct atggcagtca tgctcatggt gacggcggcc tgcggcacgc
      721 cttcagcgcc ggcggatccc gtcagcgcca actcaacaat cgccgccgat ggtggggggg
      781 gaatcgtgtc cgaccaggtg ccgatcaatc agcggtttcg gagcctcgac gaatatctgg
      841 cgttcctcga acgcacccag gcgcccgtcg acggcccctg gtaccggcag atccggccgg
      901 acctgttcga gctcgtgagc ggaaatatgc gtgtggtcgg ctcgctcggt gaaaagcagc
      961 cagagcaaca gaagcatctt ttcacgcgcg aagaactcga gaaaaagtac ggtttcgccg
     1021 aatagctccc atcggacgca gcttcgtgct ttgccgaagc tccattcaca gttagtcgaa
     1081 cctgatggct gaggtcgtcc ccctcgatct gttccggcgc gcccttgccg gcgcgacccg
     1141 ggcgatcgcc cgcgatccgg aggtcgacgt cgtgttcgcg tccgacacgg cgtcgcctgc
     1201 tggccgggcg gcgcgcgtgc cgtcgccggg gccggggctc gagccgaagc tggtcgccga
     1261 agcgcgggga gcggccgact ccgccgcctt gcggcttcgc caccacgaca gccggctgca
     1321 cgcgtcgctt gcgcccgccg accctgaagc gcgggcagtg ttcgacgcgc tcgagacgtc
     1381 gcggatcgag gcgcttggag cgcgcgcgat gggcggagtg cgggccaatc tggcggagct
     1441 cgcggaggca cgggtgcggg gcgacgcgat cgtgcgcgcc agaagcgccg aggaggtgcc
     1501 gcttgcgacc gctgtcgggc tgatcgcccg cgagcgcctg accggggaac cgccgcccaa
     1561 ggccgcccgc tccggcctga agctggtcga gccgtggatc gaggagaagg cttcggccga
     1621 tctcgactcg ctcgccctca ctctcgacga ccaggccgcc ttcgcgaaac tgtcgaggcg
     1681 gttgctcgag gacctcgacc ttgcggccgc ggtcgaggag ggcgaggacc tcgaccagga
     1741 ggccggcgag gacgaaggcg acgaagcggc cggcgacgaa ggcgaggacg acggcgaatc
     1801 ggttccgcag gacggcggtt cggaaatgcg cgccgagcag tccgacgaca gcggcgagga
     1861 cgagcagtcc gccgacgatt atgaggccgg agaggaccag ctcgccgagc gcgaacagac
     1921 aacggacagc ggccagccgg gccaggcacg gcgcaactgg gagctggccc cgccaaccga
     1981 ctacaaggcg ttcacgaccc ggttcgacga gacgatcgag gctggtgagt tgtgcgacga
     2041 ggccgagcta aaccggcttc gcgcctatct cgaccagcag atcggcggcc ttcacagcgt
     2101 cgtcaccaag ctcgccaacc gtcttcagcg gcggctgatg gcgcagcagg cgcggagctg
     2161 ggaattcgac caggaggaag ggcttctcga ctcggcgcgc ctggctcggg tcgtcgtcaa
     2221 tccgatccat tcgttgagct acaaggtcga gcgcgagacc gagttccgcg acacgatcgt
     2281 ctcgatcctg atcgacaata gcggatcgat gcgcgggcgc ccgatcgcga tcgccgcgat
     2341 ctgcgccgac atccttgccc ggacgctcga acgctgcggg gtcgctagcg agatcctcgg
     2401 cttcaccacc cgcgcctgga agggcggcca gagccgggaa gcgtggctcg ccgcgggccg
     2461 gcccggccat cccggccggc tcaacgacct tcgccacatc gtctacaagc gcgccgacga
     2521 gccgtaccgg cacgcgaaac ggcatctcgg gctgatgatg cgtgaggggc tgctcaagga
     2581 aaatatcgac ggcgaggcgc ttctgtgggc gcaccagcgg cttatcgcga ggcccgagga
     2641 acggcggatc ctgatggtga tttcggacgg cgccccggtc gacgattcga ccgcctcggc
     2701 aaacggcggc acctatctcg agcggcacct ccgccaggtc attggctgga tcgagcagcg
     2761 ctcgccggtg gagctggtcg cgatcggaat cggccacgac gttacccgct actacgaccg
     2821 cgcagtcacc atcatggatg ccgaacaact cggcggagcg atgatcgagc agctcgcccg
     2881 gctgttcgaa agcccctgaa cctgagctaa aacattaggc ccggcacgat ctctcgcgcc
     2941 gggcccgccc tcgagtacgc aacaggaggg aatcactagc ggcaaaaagc cgcattactg
     3001 gcagcgggga aaagggggga aaccccgcta catcagtggc ttatgcacga gtcgcgggaa
     3061 atgggcgctg aaccgcgaat gcagccagcg ttcagcattg gagttgtcgt aggtcgggtt
     3121 taggcggctt cgctttgcgc cagctttttc acgatctcgc gcttgagctt gcgggccgcc
     3181 ggtgacagct tgtcgtcgct ggtcttcttc agccaattgt cgaggccgcc gacgtgctcg
     3241 accgagcgca ggccgtgggt cgagacgcgc agcttgacgc tgcgctccag aacgtcggaa
     3301 atcagcgtca cgtcctgcag gttgggcagg aacacccgct tggtcttgtt gttggcgtgg
     3361 gaaacattgt tgcccacctg ccggcccttg ccggtcagct cgcatacgcg cgacatgtgt
     3421 ctaatcctga ttttggccgg gcccagcggg cccaaaatgc ggggcgtccg ttagccgctg
     3481 caccgatgcc cgtcaatgca gccgggcgaa acttcgtccg gcatatctgc gtttgatgtt
     3541 gtcgttaagc cgacacagct gcagaaggga ctgcatgcgc gcaattctct tgatcctgat
     3601 cctggcagtc gtcgtgctgc tgatcgcctt cgccacgggg cttctggaca tcaggcagac
     3661 gcggggggct agggctcccg acatcgacgt caacagctcg ggcgtcaccg ctcgcggcgg
     3721 ccagaccccg acgttcgata tcgagaccgg caccgttgcg gtcggaaccg agtcccgaaa
     3781 cgtaaaggtc ccgacggtcc gcgtcgattc gacgaacgag gtgaaccagc aggcagagaa
     3841 cgtcaccgcc aacgccgaat gaaccgcggc aatgacagtc ggacgccact gcggtagcgc
     3901 tcgtccgtgc cttttcccct gcctttcccg atgcgccggg cgctcgacct cgccgccgaa
     3961 gcggcggctg cggacgaagt cccggtcggt gccgtcgtca cgcgcgggga ggaggtgatt
     4021 gcggaatcga gaaacgcgat gcgcgggtcg ctcgatccga ccgctcatgc cgaggtggtg
     4081 gcaatcaggg ctgctgccga agcgctcggc cagccgcggc tagacgattg cactttgtgg
     4141 gtgaccctgg agccgtgcgc gatgtgcgcg gcggcggcat cggtcgcccg gctcaaggcg
     4201 attcgctacg ccgccgacga cccgaagggc ggcggaatcg cgcatggcgc aaggatcttc
     4261 gctcagccga cctgccatca ccggccggac gtcctcgggg gcatcgggga agccgaatcg
     4321 gcggccctcc tgaagcggtt tttcgaggac cgtcgcggct gatcgtgtga cccgcgcttg
     4381 ctgcgcggcg cgtttgcggg caagaaccgc gcgccgccat gagcgaccag cttctcccat
     4441 ttccgtggct cgacgtcctg atcatcctgg cgttgatcct gctcaacggg gttctcgcca
     4501 tgagcgagct tgccgtcgtc tcgtcgcgcg aggcgcgact gaaggcgctg gcgaggagcg
     4561 gcagcagcgg agcgaaatgc gcgcttgagc tagcctccga tcccggccgg ttcctttcga
     4621 ccgtgcagat cgggattacg ctgatcggga tacttgccgg tgcctattcg ggcaccagcc
     4681 tgggtggacc gattgcgcag cggctgcagc ttgtcgggct cgatcccgaa accgcgcgaa
     4741 tcgtcggctt cagcatcgtt atcgtcatcg tcacctatct ctcgctggtc gccggagaac
     4801 tcgttccaaa acagctggcg ctgcgttcgc cggaaccgat agccgcggtg gttgcgaagc
     4861 cgatgcggtg gctgtcgtgg atcgcggcgc cgatcgtgtg ggtgctcgac cgcaccagcg
     4921 cgctgctgtt ccggctggtc gggctcaaac gcgaatccga aaactcggtc actgcagagg
     4981 agcttcacct cgtcgtcgcc gaagcgcaga ctgccggagt cctggaggag agcgagcggg
     5041 cgatcatctc gggcgttgtc aggctcgccg accggccggt ccgcgaggtg atgacaccga
     5101 ggaccgatgt ggattggatc gatgtctctg cttcgggtga cgatcttcgc tcggccctca
     5161 aggaaacgcc ccacagcagg atcccggttg ccgacggctc ggtcgagaac atcatcgggg
     5221 tcgtccagac ccgcgacctg ctggaggcga tgctcgacgg ccgcgacctc aaccttcacc
     5281 acatggtgaa agcggcgccg gtcattcccg acctgatgga cgcaatggac gcccttgccg
     5341 tgctgcgttc ggcggaagtt ccgctcgcgc tcgttcacga cgaatatggc catttcgacg
     5401 gtatcgtgac gccgggcagc attctcgccg cgctcgccgg agtcttccat cacgacatcg
     5461 aggagggaga ggaaccggac atcgtcgagc gcgaggacgg cagctacctg ctgtccggag
     5521 ccgcgagcgc ggacatcctc accgaccgcc tcggaatcca tctccccgcc gatcgcgact
     5581 tctcgaccgt tgccggtttc gcgctcgagc agctgaagca tcttccggaa accggcgaaa
     5641 cattcagaca cgaccactgg tcgttcgaga tcgtcgacat ggacggacgc aagatcgaca
     5701 agctcctcgc cgtcaggacc aagcggaaga agccgcggca ggaaacggag gccggctaaa
     5761 gcttgccgaa cctctgctcg aacccgtcct cgtcgccgcg cgcgagatag tcggcctgga
     5821 gcgggacctg gtcgcgctgg agccgcccct tgaacggccc caaatgctcg tcgagccggt
     5881 cgagattgcc ttcgctaagc cgggccagct gctcgaaccg ggtgatcccc agctggttga
     5941 gcaacgccgc gaacttgggg ccgacgcctt tcagcctggt caggtcgtcc ggaggcccgg
     6001 aggcgccggg gaggttctcc tgaatcggcg cgctgaagat ctgaccgctg acgtcgccga
     6061 cggcggtcgc ggcctctccg gcgagtccgc gattaacgtg gccggtgttc gcctgcatgt
     6121 gcggacgcac aggcgcgtcg ctctggctca gctggacccg ctggcgcggg cgaaggagga
     6181 gataggctgc gaccagcacg atcgcgaccg cgatcaggat cagcggccaa tattcgctgg
     6241 caaattccat tctagtcacc atttccattg cgcgttgtga cggcggtgaa gctcgaccag
     6301 ataagcgagc aacaggccaa gaagaaagcc cgaggcggac gcgagcgcag cttcggcgag
     6361 aagcggcagc cctgcgcctg tagaccaggt ggcgcggcta acgccgggcg tagcgctcat
     6421 tatccggacc agctccgttc gctggaagtc gtcggccgga ccggagagga tcagtcgccg
     6481 gctcagcggt cctcgacgga gatgcgcctc gatctggctc atctcgaagt cggtgagcgt
     6541 ccgttgcgcg gagcggtcga ccgtcgcggc gaagcggtcg gcggctccga ccggtccgtg
     6601 ccaaagcgcc gagcccgcaa gcgcgaccgc ggcgcccacg aggagcgcga gccgccgctt
     6661 gcgccgaagc cagatggagc cggccaatcc gcctagcaga agcccaagag cgaacagcgg
     6721 ccagaaatag ctccagagcg ggttcacgcg ccttcccgtt cgagttcgcg ccagcctatg
     6781 tcgcggcggt ggaagccgtc ggcgaagtcg atctggtcga ccgctcgata ggcgcgggcc
     6841 cgggcattgg cgaaggtgtt ggcgacggcg gtgacggcaa gcactcggcc gccccgggcg
     6901 accaggccgc cgtcgccgcg ggcggtcccg gcgtggaaga cggtgactcc ctcgacctgc
     6961 tcggcggcct cgagctcacg gatcagcccg cctccgacgg gtgtcccggg atagccgcga
     7021 gcggcgacga ttacggtgac ggcgaagtcg gccgagagct ttggctcctg gatttcgcca
     7081 agccgcccct gcgcgaccga catcagcaac tctgcgaggt cgccctccac gcgcggcatg
     7141 atcgcttcgc attccgggtc gccgaagcgc acattatatt cgatcagctt ggggccgtcc
     7201 cgggtcagca tcagcccggc gaacaggatt ccggagaacg gagtcccggc ggcagccagc
     7261 gcccgcgctg tcggacgcac gatctcgtcc atcgccctgg cctcgagctc gggagtgagc
     7321 accggcgctg ggctgtaggc gcccattccg ccggtattgg gcccggtgtc gccttcgccg
     7381 acgcgcttgt ggtcctgggc gctcgcgaag gggatcgccg tttcgccgtc gacgagcgcg
     7441 aacaggctcg cctcctcgcc ttcgagaaat tcctcgataa cgagcggcga gtcgccgatc
     7501 gcccggattg cctcttccgc ttcctcacga gtcgccgcga cggtgacacc ttttccggcg
     7561 gcgagcccgt ccgccttcac cacgaccggc gtgccgaaat cgtcgagggc ggccgctgca
     7621 gcgccggcgg aatccgtgcg gacgtaccgc gccgtcggaa tcgcgttggc ctcgcacaaa
     7681 tccttggtga agcctttcga gccttcaagc cgagcggcgg cggcattcgg cccgaacacc
     7741 gcgaagcctg cctcgcgcag ggcatcgcca acgccggcaa ccagaggcgc ttcaggccct
     7801 acgacgacca ggtcgatcgc acgcttgccc gcgagctcga cgaccgcctc gacatcgcac
     7861 gggtcgagcg ccgcgcattc ggcccagcgc gctattcccg ggttgccggg cgccgcgatc
     7921 agtgcttcgc agcttggcga ttgcctcagc cgccacgcaa gcgcatcttc acgaccgccc
     7981 gaaccgagta gaagtatatt caatggatct ccccgacgac acacgctccg gcctgttagc
     8041 caacgtcccg cccggcgaca attcgccggc gctgagcgtg ggcgagctcg ccggctcgct
     8101 caagcgcgtg atcgaaggcg aattcgggca cgtgcgggtc cggggagaga tttcgggttt
     8161 caagcgccat agctcaggcc attgctattt gtcgctgaag gacgaggcgg cgtgcatcga
     8221 tgccgtcatc tggcgcggca acgccaacac gctcgcgttc aagcccgaag acggagccga
     8281 agtcatcgcc accggcaaga tgaccaccta tgccggccgc tacaaatatc cgctggtggt
     8341 cgagcgcctc gaacttgccg gcgagggcgc gttgatggcg cttctcgaac ggcgtcggaa
     8401 ggcgctcgcg gccgaggggc tgttcgactc cgagcgcaag cggaccctgc cgttcctgcc
     8461 gcgggtcatt ggcgtagtca cttcgccgac cggcgcggtc atccgcgaca tcctacaccg
     8521 gctggaagac cgctgcccga cccacgtcgt cgtctggccg gtgccggtgc agggggaggg
     8581 cgcatccgcc aagatcgctg ccgcgattcg cgggttcggc gccatcgacg gcgccggcgc
     8641 gcttccgcgt ccggaccttc tgatcgtcgc ccgcggcggc ggctcgatcg aggacttgtg
     8701 ggcgttcaac gaggaggaag tggtccgtgc cgcggccgaa tcgccaatcc ctttgatctc
     8761 cgctgtcggc cacgagaccg acaccaccct catcgaccat gcgtcggatc ggcgagcccc
     8821 gacgcccacc gctgcggccg aaattgccgt tccggtccgc gcggaactgt tcgcgctggt
     8881 cgacgatctc ggcagcaggt cacggcactg cctgtcgcga atggccgagc gcgcccgcga
     8941 gcggctggag ctcaccgcct gccgctggcc gcagccgcag tcgctgttcg ccccggccgc
     9001 gcagcggctc gacgagatcg gcgacaggct tccacgagcg ctcgcctcgc gcgcgggcga
     9061 cgcgcgcgcg gacttgaacg gcgtggcgcc ccgtcttcgc cccgagcttc tgctcgatcg
     9121 ggtggcgcgg tccgccgaca agctcgcgtc gctgtggcgc cttgcggagc ttgcacatcc
     9181 cgagcggccg cttcagcgcg gattcgtccg ggtcaccgac cgtgccggca agactcttgc
     9241 gaaagccgcc gacgccatcg ccgccaaatt gctgacgctc cacttcggcg acggcgacgt
     9301 cccggcggcg gccggcgatt ccgcgcctcc ggttgagcgc aagcgccgct cttcctatgt
     9361 gtcttcgcag cccggattgt tcgaccaggc ggaggaatag agatgctaat gaccggcacc
     9421 ggcacgcccg cgagagtcca ttatatggcg gggacgttcc gggtcctcag caacggcgac
     9481 catgttgtct gcgcggtcac cggactccgt atccccttgc acgagctgaa atattggagc
     9541 gtcgagcggc aggagcctta cgtcgacgcc gaggcgagcc tcaaggccga gcaacgcatc
     9601 cgctaagccc gaaaagggac gtcaaaagca ctgtggcagt cccgacacag tggccacaca
     9661 aaagctgcgc gcaacgacgc agcaacttta cagcccggca ccctagcctc cacaagcaag
     9721 accttgaggg gggaggcttg cgctttccgc tgaggttttt ttgcggcgcc cggggaggcg
     9781 tcggtattcg ggagaatgtg atgagaaagt cgattttgcg agcgtcggcg ggccttcaag
     9841 cccttgcgct cctgggggcg ggaaccgctg ccagctttat cgtggccgct ccggctgcgg
     9901 cgcaggacta cacgtccggc gtgatcaccg gcaccgtccg gactgacgcg ggtgcgccga
     9961 tcgccggtgc gaccgtcacg gctcgctcgg agcagcaggg ttggacccgc tcgacgacaa
    10021 cgtcggctgc cggccagttc agcttcagct cgctcccgcc gggtgactac gacgtcactg
    10081 tccaggctgc gggcgtttcc aacttccgcg ccgataacgt gcaggttatc gccggtgcga
    10141 cgtcggacct cccgatcgtc atgacctcgg caaccgccga gggcgcgacg ggcggcgaag
    10201 tcgtcgtcgt cggccgactg ctccaggcgt tcaccggaac gaccaccggt gtgaacctcg
    10261 acgtcgagga cctggtcaag accgttccgg tcggccagaa cctgacctcg ctggtccttc
    10321 tcgcgccgag cacgaaccgc ggcgacaccg cgttcggcaa cctggcctcg atcggcggtt
    10381 cgtcggtcgc cgagaacgct tattacatca acggcctgaa catcacgaac ttcgacaact
    10441 acctcggctc cgccgaagtg ccgttctatt tctacaagaa cgtcgaagtt aagtcgggcg
    10501 gctacccggc cgagttcggt cgcgccaccg gcggcatcat caacgccgtt tcgaaggccg
    10561 gcaccaacga atataccggt gccgtccacg tcagctgggc gcccgatttc cttcgctcaa
    10621 ccgagcgcga ccaggagacc tgttcatctg acggtacctg cgctccgctg accaaccgcg
    10681 aagacgattg gaccgacacc tattcggttg cggtcgaagg cggcggaccg atcattcgtg
    10741 accgcctgtt cgtctacggc ctcctcgagg tgcagaagca ggattggttc cgcgccgctc
    10801 cggcttccga ccttggctat cactatacca acgacgaccc gttctgggcc gtcaaggtcg
    10861 atgcctatcc gatcgacgac caccacctcg agttcaccat cttcgacacc cgcaacacga
    10921 ctcgtcgtga gaaccaagag tacctcttgg gcgccgacgg cgagtatagc cgcggagcag
    10981 tcgttgggag ccaggattac aactatggcg gcgtcaactt cgtcggcaag tataccggcc
    11041 gcttcaccga ctggctgacc ttgtcggctg cctatggccg catgcgtgac cgcttcgaca
    11101 tccagttcgt cgacgcgggc ggcagcgctc cgtactacgt caacgcgtcg ggcggaacga
    11161 tcttcggtgt cggcccgggc ggtgcttaca acggtcagac gaccagcctg tacgacttcc
    11221 cgtacgaaac gcagcgcaag ttctaccgcg cagatgcgga catcaccttc gacatgttcg
    11281 ggcatcacca cgtccgcctc ggtgtcgacc gtgagaacaa cacgctcaac cacgcgacgg
    11341 tccgtccggg caactcgctg ctctgcggca ccggcttcct gtcggcagcg gcttgcgcca
    11401 acaccggcgc cggcgcagcg atcatcttcc gcaacggcct cgctggccag gacccgcagg
    11461 tcgagatcaa ctatctcgtc agcggcggtg gcttcacggc gcgcaaccag gcggcctata
    11521 tccaggacga atggaacgtc acggatcggc tgaccctgaa cctgggcctg cgccgcgacg
    11581 acttccgtct caacaagcag gacggaaccg tcttcctgga gagcaagggc aactatgcgc
    11641 cgcgtatcgg tgcgacctac gaaatgtggc ctgacaagtc gggcacgctg aaggcgttct
    11701 tcggtcagta cttcctgccg ttcgcgagca acaccgcggc acgtcaggcg gcttcggagc
    11761 tctacttccg cgagcgcttc tacttcaccg gacttgacgc caatggcctt ccgatcctcg
    11821 gagctcaggt caccgactat ccggcctaca acgtgcagtg cccgttcggc ctcacgccag
    11881 tctcgagcgg gcagaactgc tcggtttcgg gtgccggcga gacgccgctc acgacgcagg
    11941 gtacggacgc cggtctcaag gcaactcgtg agagcgaata catcctgggt tacgagcaca
    12001 agctcaacaa cggatggcgc gtcgggctca cgggcgtata ccgtagcctc gacacgagcg
    12061 cggaagacgt cgcgatcgac gccgcggcac ggacctactg tatcgcagag ggctttgccg
    12121 aagcgacctg taacgcgatc tggtcgggtt atcaccagta tgtgatcacc aacccgggta
    12181 cgccgatgac cgtggcgctg aacgccgaga atggtccgtt cgccattccc gagcttcata
    12241 accgcgtcgt cactctcgat ccggcagacc ttggctatcc gaaggcgaag cgcacctaca
    12301 aggcgctcga gttcaccttc aacaagccct ggaacgaggt gtacagcctc aacggcagct
    12361 acacgctgtc gtggagcaag ggtaactccg agggcatggt ccagtcggac ttcggacagg
    12421 acgatgccgg catcacgcag gacttcgacc agcccgggtt caccgagcat tcctacggtt
    12481 acctgccgaa cgatcgccgt caccgcttca agctctgggg ttcctatgca ctgaccccgg
    12541 acctgatcct cggtacgcag atccaggtca tgtcgcctcg tcacctgagc tgccttggct
    12601 actatccggt cgaggactcg cttgagaacg gctacggcgc cgcgtctcac tactgcggtg
    12661 gcgtccccgc tccgcgtggc acgggtctcc gcagcggctg gtaccagcag gtcgacctct
    12721 cgggtcgtta caacctgcac atcggcacgg gtcagatcgt gacgctgcgc gccgacatct
    12781 tcaacgtctt caatgcgcag gcagtgatgc agcgcaacga agttggagaa atcggcttcg
    12841 gcgttgcaaa cccgaactac ggcaagccga gggcttacca gactccgcgg tacgtccgcc
    12901 ttggtctgga catcgccttc ggtggtggta tcgctccgcc gccgccgccg gttgaggtcg
    12961 tggctccgcc gccgcccgtc gtggaggctc cggcaacgca gacctgcggt gatggcacgg
    13021 tgatcctggc gaccgagcag tgccctgctc cgccgccgcc gccgccgccg ccgccggccg
    13081 ctcccgagcg gggctaaccg cggtcagtcc ggtggcttga cgccggattg agcaaacaag
    13141 gaggggccgt tccggggata ccggagcggc cctttctgct tgcggtgagc atgccgaagc
    13201 cagggctgcg gctgtaagtc cgggcgccgg cactcaccgg cggacggcct taggctcaag
    13261 cgataacgcg ggttcgccgg cgcacagcgt tcgattgcgc ggatggcgcg gcgaaggggc
    13321 gggcagctat tccgcggctt cggacaaatc gccgttcgct tcgggcgtca gcaccagctg
    13381 cccgtcgccc tcgtcgacac ggaccgtctg cccgtcacgc acctgcccgg acagcagcgc
    13441 gtcggcgagc gggtcctgca ggtacttctg gaccgcccgc ttcaatgggc gtgcaccgta
    13501 taccggatcg tagccgaccc gcccgagcca ctcgcgcgcc gcgggtgtca actcaatcct
    13561 gatcttgcga tcctcgagca gctgctgaag ccgggcgatc tggatgtcga cgatcggccc
    13621 catgtgggcg gtcccgagcc tgtggaagag gatgatctcg tcgagccgat tgaggaactc
    13681 ggggcggaag tgggctcgga cgacctccat cacctgcggc tcgaccttct cgacagcctc
    13741 atcctcgccg agcccggcga ggaactgcga tcccaggttc gaggtcagga tgatgatcgt
    13801 gttggtgaag tcgacggtgc ggccctggcc gtcggtcagg cggccgtcgt cgagcacttg
    13861 gaggaggacg ttgaagacgt cggcatgggc cttctcgacc tcgtcgaaca gcaccacctg
    13921 atagggccgg cggcgaacgg cctcggtcag aacgccgcct tcctcatagc cgacatagcc
    13981 ggggggcgcg ccgatcagcc gagcgaccgc atgtttctcc atgaattcgc tcatgtcgat
    14041 acgcaccatc gcggacgcat cgtcaaacag gaattcggcc agcgccttgg tgagctcggt
    14101 cttgccgacg ccggtggggc cgaggaacag gaacgagccg agcggccggt tggggtcctg
    14161 caaccccgct cgggcgcgcc ggacggctgc cgacaccgcc ttgaccgcgt cttcctgacc
    14221 gatgacccgg gcgccgatcg cgctctccat ttgcatcagc ttgtcgcgct cgccctccat
    14281 catccgctcg accggaattc cggtccaccg gctaacgact ccggcgatgt cctggtccgt
    14341 gacttcttcg cggagcatcg cgccttccga cgccgcctgg gcatcgccga gctgcttttc
    14401 gagctcgggg attcggccgt actgtagctc gcccgctttc gcgagatcgc cagagcgctg
    14461 cgcctgatcg agctctagcc gggcggcatc gagctgctcc ttgatcttgg cttcacccgc
    14521 gatcttctct ttctcggcct gccagcgctg ggtaagctcg gccgattgct gctcgaggtt
    14581 ggcgagctcg ccttcgagct tgtcgagccg ctccttggac gccttgtcct gctctttctt
    14641 cagcgcctcg cgctcgatct tgagctggat gatccggcga tcgaggttct cgatttcttc
    14701 gggcttggat tcgacctcca tccggatccg gctcgcggcc tcgtccatca ggtcgattgc
    14761 cttgtcggga aggaaacggt cggtgatata gcggttcgac agtgtcgcag ccgcgacgat
    14821 cgccgcatcg gtgatcctaa ccccatgatg cagctcgtat ttctccttga gaccgcgaag
    14881 gatggagatg gtgtcaggaa cggtcggctc gccgacgaag accggctgga agcgccgttc
    14941 cagcgccgcg tccttctcga catgcttgcg atattcgtcg agcgtggtcg cgccgatcac
    15001 gtggagctcg ccgcgcgaaa gcgccggctt gagcaaattt ccggcgtcca tcgcgccttc
    15061 gctcttcccg gctccgacca gcgtgtgcat ctcgtcgatg aagaggatga tattgccttc
    15121 ggactgcttg acctcgtcga tcacgccctt gagccgctcc tcgaactcgc cgcgatattt
    15181 ggccccggcg atcagcgagc ccatgtcgag cgcaagcagc cggcggtcct tgataccgtc
    15241 ggggacgtcg ccgttggcga tccgaaccgc gaggccttcg gcgatcgccg tcttgccgac
    15301 ccccggttcg ccgatcagca cggggttgtt cttggtccgg cgggcaagca cctggacggt
    15361 gcggcggatt tcctcgtcgc ggccaatgac cgggtcgagc tttccgtcgc gggcggcctg
    15421 ggtaaggtcg cgcgtatagc gcttcagcgc gtcgtaccgg tcctcggagc tctgggtgtc
    15481 cgcggttcgc ccgccgcgaa gcttctcgat cgcggagttc aagccctgcg ggcgaacgcc
    15541 ggcattttcc agtgccttgg cgacgtctgt gcctttggcg agtgtcatcg ccagcaatat
    15601 ccgctcgacg gtcacatatt ggtcgccggc cttcttcgcg acctgctccg cctggtcgag
    15661 cacgcggatg gtgtcgccat ccatcgccgg agcggaagtg gcgccgctgc cggtcactgc
    15721 cgggaccttc gcgaccagcg cgtcgacctc gcgcttcgcc gccttggagt cgccgccggc
    15781 ggcctcgata agccccgccg ccattccctg ctcgtcgtcg agcagggcct tgagcaagtg
    15841 cgccggcgca atgcgctggt gatgctcgcg aaccgcgatg gtctgcgctg cctggaggaa
    15901 gccacgggcg cggtcggtca gcttttcaaa gtccattcaa aaacccccta tggtcgggag
    15961 cgatattggt gttgcatctg ggcaacacaa gggatgctcg aatcccctta tttcacaacg
    16021 gcttcaacgg gctccggcgc atgcggttgc tcgcctagcg gatcgcagga agcctcctcg
    16081 ccggccggaa gccagcgcct gaacccccgc gaatcgacgt ggaagcgaag gaacgggtaa
    16141 aagccgagcc cggtcgaata agcttcgccg cggcgctggt ggaccgcgca catcgtccgc
    16201 atcagctgtt cgcgcgtggt ctcgttcagt ggcaccaggt cgagcgcgta gaatcccctg
    16261 tgggcgctcc cgggggcgcc gccggcgcat tcgttcaggc gcgcattgcg ataggcggat
    16321 accgcttcga ctgggccgac cgcggggatc acctcgtcgc ggacgaagcg gagcgtctgg
    16381 acgatgtggg gccactcgct ggtcggcggc acttcgaagg ctgcatcgtt gcacttcctc
    16441 cagtcgctgg cggttcggat gatctgccag gtcgggagca cccagccggc gccgtaatgg
    16501 gtgatgtaat gatggagccc cgccacccgg atcgggttta ccgggctggc gagataccag
    16561 gcccggtagc ccggctcgtc ctggccggcg atcacgtagc gctcggtcgg attgtaggtc
    16621 tgcgccccgg cagccgtgcc ggagagcgtc agaagcagga gcagtgtacg catcgcggcg
    16681 caccctactt gaaatgcgcc tccgcgccag ccacaccgtg cccatgggcc agccgatcga
    16741 cgtcgacctt ccgcacaagc ttggcaagga ggaggcgaag cgccgaatcg gtggcaatat
    16801 ccacaagctt cacgagcaga tcccgggagg cggcaatgtc acgtcgcgct gggaaggcga
    16861 cacgctgaag ctgtcggtgg cggcgatggg cgacaatatc aacgccgacc tcacggtctc
    16921 tgagtccaac gtccactgcc atttcgacct ccccggcctt ctgggaatgt tcgcgcagcc
    16981 gatcgcggcg atgctgaagg ccaagggcgg cgatttgttg ctcgaggaca aacgcgactg
    17041 atgcgccact tcgcggtggt cggatcgggg ccggggggct tctacaccgc ggaagcgctg
    17101 aacaaggcct atggcgagca ggcgcgggtc gacattatcg accgttaccc agtgccctac
    17161 ggcctcgtcc gcttcggggt cgctcccgac catcagtcgc tgaaggcggt ggcgaagcgc
    17221 tacgacaaga ccgccgaaag cgccggagtc gacttcatcg gcaacgtttg cgtcggccgc
    17281 gacctgtcga tccgggaact gctcgagctt tacgatgccg tcgtgctggc gatcggcgcc
    17341 cctaacgacc gcaagctcgg gattccgggc gaggatttgc cgggagtgat tggctcggcc
    17401 gcgttcgtcg gctggtacaa cggccatccc gaattcgccg acctcgagcc gccgctcggc
    17461 ggaacccacg cagccgtgat cggcaacggc aatgtcgcgc tcgattgcgc ccgaatcctg
    17521 tcgaagacgc ggggcgagct gtccgaaggc gacattgtcg gccatgcgct cgacgcgctc
    17581 gatgcttcgc cgatcagcgc cgtcaccatc ctcggccgcc gcgggccgct gcagatctcg
    17641 atgactccga aagaacttgg cgagctcggc catctcgatg cttcgac
//
LOCUS       DATAKH010000184         2999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_28560,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000184 DATAKH010000000
VERSION     DATAKH010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28560"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..348
                     /locus_tag="VHN55_07680"
     CDS             <1..348
                     /locus_tag="VHN55_07680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013832527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2803842.1"
                     /translation="GLKLSGGEKQRVAIARTLLKNPPILILDEATSALDSKTEEAILA
                     TLERLARNRTTITIAHRLSTVVNSDTILVLDEGEVAESGTHEELLDRGGLYADMWYRQ
                     AAERVAEAAEAAE"
     gene            427..2253
                     /gene="recQ"
                     /locus_tag="VHN55_07685"
     CDS             427..2253
                     /gene="recQ"
                     /locus_tag="VHN55_07685"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016746197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEX2803843.1"
                     /translation="MAGHIHEILKSVFGFHTFRGAQEQVVDRVMAGEHTLAVMPTGAG
                     KSLCYQLPALARDGTALVVSPLIALMHDQIRSAEAIGIRAASLTSADGDRDRTVERLR
                     SGELDLLYVAPERATTDSFRRLISNIPLALIAIDEAHCVSEWGHDFRPDYRLLRPLLD
                     AFADVPRLALTATADERTRADILTQLGIPADGLVVAGFDRPNIRYHVEPRQGLGAQLK
                     QLLARQKGPGIVYVPSRDKAERIAESLAASGRPARPYHAGLDPAVRARNQAAFVESEE
                     MVIVATVAFGMGIDKPDVRFVAHAGIPKSIEAYYQETGRAGRDGDPSEAWLFWSAGDF
                     ATARKRIETEIEPGRRQGERERLNALAALVETATCRRAILLRHFGESPPERCGNCDNC
                     LNPPTTVDATDAARKFLSAVFRTEMRFGAGHVIEVLAGNDSEKVRNFGHHRLSVFGIA
                     SHDELALMQPVARALIARDALRADAYGGLSFGPAAKPILKGEAALEIALPPKRARRPR
                     KRFDDGPPDPLFDALREARRSLAAAAGVPAYVVFHDSTLRGIAAARPRSLAELAAVNG
                     VGESKLRRYGESMLATVRAQEERADDPATRREDHGERADPAR"
     gene            2198..2602
                     /locus_tag="VHN55_07690"
     CDS             2198..2602
                     /locus_tag="VHN55_07690"
                     /inference="COORDINATES: protein motif:HMM:TIGR01244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HEX2803844.1"
                     /translation="MIRQLDEKTMVSGQIQPADIAGLKESGVSMIVCNRPDGEDPGQP
                     DAAEIERAAEAAGIEFRHVPIVRGIGPSDVESMQEALEAARGKILAYCRSGNRSALTW
                     AVARREQGASVEELQKAAAGAGIDLSPVAHLL"
     gene            complement(2599..2808)
                     /locus_tag="VHN55_07695"
     CDS             complement(2599..2808)
                     /locus_tag="VHN55_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014078158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HEX2803845.1"
                     /translation="MSSLAELARFPTRVDADLARMRLEAAGIGAVLFDEGMNYIGLGP
                     AMPVRLMVLEEDAEEAARLLAADLR"
     gene            complement(2805..>2999)
                     /locus_tag="VHN55_07700"
     CDS             complement(2805..>2999)
                     /locus_tag="VHN55_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003043070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HEX2803846.1"
                     /translation="HSEDLDDQNRAVLLFTQLGDEEQLGYAKKHRDVIARFGRFPHRN
                     AMLGRAPREDEIAAGDVVPW"
BASE COUNT          482 a         1012 c         1044 g          461 t
ORIGIN      
        1 ggactcaagc tttccggcgg cgagaagcag cgcgttgcga tcgcccggac cctgctcaag
       61 aacccgccta ttctcattct cgacgaagcg acgagtgcgc tcgacagcaa gaccgaggag
      121 gcgattcttg cgaccctcga acggctcgcg cgcaaccgca cgacgatcac catcgcccac
      181 cggctgtcca cggtcgtgaa ctcggacacg atcctggtgc tcgacgaagg cgaagttgcc
      241 gaaagcggga ctcacgaaga gcttctcgac cgcggcgggc tctatgccga catgtggtac
      301 cgccaggccg ccgagcgagt ggccgaggcc gccgaagccg cggaatagtc gcgccgccgg
      361 gggtttacgc gctcgcccag ctccggcagc gtcacacccg ctcggtcaat catcgcggga
      421 gtcggagtgg ccggccacat tcacgaaatc ctcaagtcgg tcttcggctt ccacaccttc
      481 cggggcgcgc aggagcaggt cgtcgatcgg gtgatggccg gcgagcacac gctcgcggtc
      541 atgccgaccg gggccggcaa gtcgctttgc taccagcttc cggcgctggc gcgcgacggc
      601 actgcgctgg tcgtctcgcc gctgatcgcc ttgatgcacg accagatccg atcggccgaa
      661 gcgatcggga tccgcgccgc ttcactgacc tcggcggacg gcgatcggga tcggacggtc
      721 gagcggctgc gttcgggcga gctggacctg ctctatgtcg cgcccgagcg ggcgacgacc
      781 gactcgttcc gacggctcat ctccaacatt cccctggcgc tgatcgcgat cgacgaggcg
      841 cattgcgtca gcgaatgggg tcacgatttc cggcccgatt accgtcttct tcgcccgctt
      901 ctcgacgcgt tcgccgacgt gccgaggctg gcgctgaccg cgaccgcaga cgagcgcacc
      961 cgcgccgaca tcctgaccca gctcggaatt ccggcggacg ggctggtggt ggccgggttc
     1021 gatcggccca acatccgcta tcacgtcgaa ccccgtcagg gcctcggcgc tcagctgaag
     1081 cagctgcttg cgcggcagaa ggggccgggg atcgtctacg tgccgagccg cgacaaggcg
     1141 gagcggatcg cggagtcgct ggcggcgagc gggcggcccg cacggcctta tcatgcgggg
     1201 ctcgacccgg cagtccgggc gcgcaaccag gcggcattcg tcgaatccga agagatggtg
     1261 atcgtcgcga cggtcgcctt cggcatggga atcgacaagc ccgacgtgcg cttcgtcgcc
     1321 cacgcaggca tccccaagtc aatcgaggct tattaccagg aaaccggccg cgccggccgc
     1381 gacggcgacc cgtccgaagc ctggctgttc tggtcggcgg gcgacttcgc gaccgcgcgc
     1441 aagcggatcg agacggagat cgagccgggc cggagacagg gcgagcgcga gcggctgaac
     1501 gcgcttgcgg cgctcgtcga gacggcgacg tgccggcggg cgatcctgct ccgccatttc
     1561 ggcgaatccc ccccggagcg gtgcggcaat tgcgacaatt gccttaaccc gccgacgacg
     1621 gtcgacgcca ccgacgcagc gcgcaagttc ctatccgccg tattccggac cgaaatgcgg
     1681 ttcggagcgg gccatgtgat cgaggtgctg gccggcaacg acagcgagaa ggtgcgcaac
     1741 ttcggtcacc accggctgtc ggtgtttgga atcgcgtcgc atgacgagct tgcgctgatg
     1801 cagccggtgg cccgggcgct gattgcccgc gacgcgcttc gcgccgacgc ttacggcggg
     1861 ctttcgttcg gtccggccgc caagccgatc ctgaagggcg aggcggccct ggagatcgcc
     1921 ttgccgccga aacgagcgcg gcggccccgc aagcgctttg acgacggccc gcccgacccg
     1981 ctgttcgacg ccctgcggga ggcccgccga tcgcttgcgg ctgcggcggg agtgcctgcc
     2041 tatgtcgtgt tccacgattc gacgctgcgc ggcatcgccg ctgcgcggcc gcgctcgctc
     2101 gccgagctgg ccgcggtgaa tggcgtaggc gagagcaagc tgcggcgtta tggggagtcg
     2161 atgctcgcga ccgttcgggc gcaggaagag agagcggatg atccggcaac tcgacgagaa
     2221 gaccatggtg agcgggcaga tccagcccgc tgacatcgcc gggctgaaag agtcgggcgt
     2281 gtcgatgatc gtgtgcaatc gacccgacgg cgaagacccc ggccaacccg acgcggccga
     2341 gatcgagcgc gctgccgaag cggcggggat agagttccgg cacgttccga tcgtccgcgg
     2401 catcggcccg tcggacgtcg aatcgatgca ggaagcgctg gaggcggcga ggggcaagat
     2461 cctcgcttac tgccgctcag gcaaccgctc ggccctgacc tgggcggtcg cccgccgcga
     2521 gcagggcgcc agcgtcgagg agctgcaaaa ggcggctgcg ggcgcgggta tcgacctgtc
     2581 gccggtcgcg cacctgctct agcgaaggtc cgcagcgaga agccgggccg cttcttcggc
     2641 atcctcttcg agaaccatca gcctcaccgg catcgctggc cccaggccga tatagttcat
     2701 gccctcgtcg aacaggaccg cgccgattcc cgcggcttcc agcctcattc gggcaaggtc
     2761 ggcatcgacc cgggtcggga agcgggcgag ctcggccagg ctgctcacca gggcacgacg
     2821 tcgccggccg cgatttcgtc ttcgcgaggc gcgcgcccga gcattgcgtt gcggtggggg
     2881 aagcggccga agcgggcgat tacgtcgcga tgcttcttcg catagccgag ctgctcttcg
     2941 tcgccgagct gggtgaacag gagcaccgcc cggttctggt cgtccaggtc ttcgctgtg
//
LOCUS       DATAKH010000185        11678 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_22544,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000185 DATAKH010000000
VERSION     DATAKH010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11678
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22544"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1132
                     /locus_tag="VHN55_07705"
     CDS             <1..1132
                     /locus_tag="VHN55_07705"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2803847.1"
                     /translation="RVLHVIGSLTLGGIETWLMQMLRHRDDFAVEHEVMVTKDDPGAY
                     EAEARRLGVTIHKLPIGSQKLAWIRQFRHYLMDHGPFDAVHSHIYLTSAAVLAAAKAE
                     GVPIRIAHCHAARSRGREFQTARHRLRRAIAIAWLKRVATRRLGISEAAIEEIAGHGW
                     RTQAGASILLYGFDFSRFRGAGKRAAQLRRDLGLGKAPVVGHVGRLEPVKNHAFLLKA
                     FAALLERMPEARLVLVGDGPIRAEIEQLTKSLGLGERVHFAGASDEVPAYMAMFDLFA
                     LTSFSEGLGIVCLEAQAAGTPAIVSDAVPLEVSIVPGAVQHLALSAGANEWARKMCET
                     LQQPPAPADEWLAQVEGSAFGLQRCIDELDELYRSELQRAGV"
     gene            complement(1164..2078)
                     /locus_tag="VHN55_07710"
     CDS             complement(1164..2078)
                     /locus_tag="VHN55_07710"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX2803848.1"
                     /translation="MTFPNLVIGGAPKCGTSSLFNWLADHPQACGSSIKESFFLMDED
                     NPLRRRDCNFRDHGLDAYAGFFRNCAERHEVVLEATTHYLYQQTALEVLASLPTRPRL
                     LFVLRKPSERLFSSFAYSKNNLGHVRADLSFAEFADRITSGSAEYSPDRAFGPSAYVL
                     ARDFQYSCYVDYLTLWRDRLGKERVRILLFEAMRADPRAAIQDLCRWLGIDPSFYDNY
                     DFTPRNRTVAVRSGRLQRIARAVGRRAPAGFLKTFLKGLYGSLQAKAVEEERSADDCA
                     ALARLDEKFRPFNDRLARDFGLDLRAWD"
     gene            2329..3495
                     /locus_tag="VHN55_07715"
     CDS             2329..3495
                     /locus_tag="VHN55_07715"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2803849.1"
                     /translation="MSLPPVLFVLPQTDAVANGGIASISEIIGRMRLHRPIIVTDRET
                     PRVEQWRREGIETHVVPQTASAGFLSNPIGTIRSYLRYGRVLRRLLDQSGAKIIHANN
                     PLSVQLSAAAAKLTGTKLILNQRASFGAHRQPSRLKYRLIFAAVDHVLFLSEDMARRW
                     REHVPNAGRSYSVTYSAVDPKRFFPTPASSADEPVVLISALIRPLKGQLEFLRHVAPK
                     LAESGVKIWFAGDFQPARDRYMAQCAEAAAPLGDSVQFLGYRADIPELIARASVIAVT
                     SHHEGLVRAMIEAMACGRPVVSFEVCSASEVLEKQSGGAGSVIAQGDYEGMAEAILRY
                     CRDHDLAADAGEKGAATASSLFDPDAVVSRYEGVYQRLALGDRGAGSLAQVEQQ"
     gene            3492..4235
                     /locus_tag="VHN55_07720"
     CDS             3492..4235
                     /locus_tag="VHN55_07720"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HEX2803850.1"
                     /translation="MTEQPVKSAPHKLRKTPDRLPKSVPERALALARMWNDSRRAARH
                     DDSIFIHIPKNGGTSVYTMLHSAGLVKLNSLRAVQLFFRGKGRVTFGHMAVGSLVELG
                     MVPQDYVDRAFKFALSRDPYARAASLYRIYCKMTATWHRQASFHDFLKMLADGYYNRI
                     GPYDSLGMSPCNPQVAWLRDTPPDKIYRVEDLREFADDISERWKIAKPDLVHMNWTSR
                     STELNLSPDEKALIKEVYRDDFETLGYDK"
     gene            4251..5267
                     /locus_tag="VHN55_07725"
     CDS             4251..5267
                     /locus_tag="VHN55_07725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803851.1"
                     /translation="MAIAVTSSEAPDQPDAAGKNAVSDGREIAPLLIHIGFHKTGSTW
                     LQQELLDNPAFGFTTQTGETRQQIIMRVGVPDPLSYDATAVASHYAPAIDEARKSGLT
                     LALSHERLSGHPSSGGRDRCMIADRLKSTFPESRILIVFREQRSLIQSMYSQHISAGG
                     VESLRRYLTTPEPGWLRKPSFAFELYEFDTLIRYYQQLFGTDRVLALPLELLQARPAE
                     FASRISTFCGHPPVEPEDTRSKNVRRPQLMQLVQRPLNMLFFHNDLSPGALLHVTRFH
                     MRYGKYARPLFNLITPKVLDDWILRRQRRIIDSMVGNRYAVSNRRTQEIVGLPLADLG
                     YPVS"
     gene            5310..6038
                     /locus_tag="VHN55_07730"
     CDS             5310..6038
                     /locus_tag="VHN55_07730"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HEX2803852.1"
                     /translation="MIDGTDSAPAARLKGYFPRLREAVSLWSEAGKAARHDDSIFIWI
                     PKNAGTSIHAVLRDYGFVKLKSPRSVRLSFRGRGRVTFGHMAVGSLVEAGLVSPQFVE
                     RSFKFAFTRDPYARAASLYHYLSNTYVIPNWHERPSFRQFLNLLADGFYDRIGLYNTR
                     GLSQCSPQADWLRDTPPDKLYRIEDFGEFLTDIAERWGISASEIPYLNRSGNRAEIEL
                     EREDRALIEKIYAEDFDMLGYSRK"
     gene            6089..7582
                     /locus_tag="VHN55_07735"
     CDS             6089..7582
                     /locus_tag="VHN55_07735"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEX2803853.1"
                     /translation="MDEEHRSLTRPTLHSIAWITATRGMRAPITLIAVAVLARLLTPA
                     DFGIVAIGMIFVTFSDTLIDGSFGMVLIQRRKITPAVIGATLFLSAALALVVSAGVAI
                     LSPFIEREFDFPQLSAVLLLLAAALPITAITAVTSSLLQRALELRILSLIGVGSQLAY
                     VIAAIGFAVAGMGLWSLVWAQMLQWLVDAALQFLTVRKKYRLGFSLAGVRDVLGTGGM
                     FTISKMLKWAANSADKVIIGRFLGASELGFYSRASTLMRSARQLAGAGPMRVLFSSFA
                     KMQHDPPRMRKAYNRALSASLIVSTLVSGFVIVDAELIVRILLGPQWLATIPIIQLLF
                     FAFIPKTAAVVAEAVPLAFGLGGASALREGAQLTLVIIGAAIGAQFGVVGAAAGVCIA
                     FWLFYVISLKLVHTLLQTTWLEMLGVHSAGIAVALPPVLLALGTAWLVPDGGILLQLV
                     PAAVFAIAALVVLLVGPASLVSDDVVRARALLHEKLQPYAARFVGRS"
     gene            complement(7579..8769)
                     /locus_tag="VHN55_07740"
     CDS             complement(7579..8769)
                     /locus_tag="VHN55_07740"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2803854.1"
                     /translation="MRILFAHDHQFRSAPGGAVYTPTSFAASAWDRYLEHFDELRVVS
                     RAGPPVADGANLARSDRDGVSFDFLPSLSSLRQLAAPSAEATARMGSAIDWADAVVAR
                     LPSEIGLMAVREAQRLGKPYAIELVGCPWDALTHHGSPAARLYAPVMVHRTRRAVKSA
                     PMVLYVTAKWLQGRYPTDGVAAIASNVEIVPVTDSARASRERRLKELAAGRPPILGTV
                     ASLRVKSKGIQTAIPALARVRASGLDLTYRVLGPGDTEPWVALTEKNGVSDLVHFDGT
                     RSAGEGVSGWLDEIDIYLQPSFHEGLPRATIEAMSRGAACIGSTCGGIPELLPSNRLH
                     RPGDVAALAKIVRRLASDPSEIAMASRADRDTARSYDPEILRSRRSDFFRRLRDISDA
                     RHNR"
     gene            complement(8793..9356)
                     /locus_tag="VHN55_07745"
     CDS             complement(8793..9356)
                     /locus_tag="VHN55_07745"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019112620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEX2803855.1"
                     /translation="MIKRLFDILVSAFGLAVLALPMLIIAVVIRLSSPGPALHWSQRV
                     GRDNVIFEMPKFRTMRADTPQMATHLMTEPGKWVTPIGRWLRRTSLDELPQLWSVLVG
                     DMSVVGPRPALFNQDDLIEMRTKRGVHRLVPGLTGLAQVSGRDDLPIPVKVEYDAEYC
                     ARTSLLFDLKILGRTVLKFMKAEGISH"
     gene            complement(9353..10288)
                     /locus_tag="VHN55_07750"
     CDS             complement(9353..10288)
                     /locus_tag="VHN55_07750"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX2803856.1"
                     /translation="MRLLITGASGFVGRAIVRNCVANGHDVRALVRRDDHGFNSPVEV
                     VRTGDLTREDVSPDALEGCDVVVNCAARVHVTRETEADPEAAYRAANRDLPVRLLNQA
                     ADCGVSRFVQLSSVAAVTSVTPPGRPVDDSAEPRPRSPYGRSKLEADLRLAEVGRERG
                     IAVVSLRPPTVFGPGVGAYFRMLMRCAKFGLPLPLGSVRNRRSFIFSENLADAVVTAA
                     GASGEGTFIVTDSPPISTGQLYRSLLRLLGRPAFVPPVPAVLVRRASQFVLGDRVESL
                     IGDSAFDGSRFRETFDWSPPVSFERALEITVGGSS"
     gene            complement(10317..>11678)
                     /locus_tag="VHN55_07755"
     CDS             complement(10317..>11678)
                     /locus_tag="VHN55_07755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008755 - O antigen polymerase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen polymerase"
                     /protein_id="HEX2803857.1"
                     /translation="LLLLPILVLSNHRLGILHPLLMAVVVWPLISQLPQVIQDLGGWG
                     GVLVGLPVNVPFYLGLPSHSPTTVWMATAKYNTIEIIALLCTYAGFWLFKVRPKPRLP
                     LVLPDSRVFQGVLLSLIGLSLLVLLAFVYSRGGIIAHVTSLGLGRFRELSGAGPIIVA
                     SRLGTIALYLWIAARPDDAKSPIFLACLAAITVTQFISNGSRSRALEVPMVAGVIWAL
                     RKQRVPWRTALILAPFLFVSLGLLGAVRSSTWTGQDAGEVWSSTGIEESLLHVQQELE
                     GRRAISAQIPIVARGFEVTGGPMLGSTYMAALGAIVPRTIWEDKPRGPGSLYAQMFLG
                     ASSEAFGTPVAPPTEMYWNFGIGGVLLLSLLYGALIRIAYNAFWRRFPSPFAVVFFAL
                     FLTGFKIGTIPLVDFEQSLGLLGVCYIATFLVPRRKYAVAKPRGRFAPGAAAMPAAGA
                     ALQ"
BASE COUNT         2214 a         3725 c         3628 g         2111 t
ORIGIN      
        1 gcgagtcctg cacgtcatcg gctctcttac tctcggcgga atcgagacct ggctgatgca
       61 gatgcttcgc caccgcgatg attttgcggt cgagcacgag gtaatggtta ccaaagacga
      121 ccccggcgct tacgaggcgg aggcacggcg ccttggcgtt acgatccaca agctgcctat
      181 tggttcgcaa aagctggcgt ggatccgcca atttcgacac tacctaatgg accatggtcc
      241 tttcgacgcc gttcactccc acatttacct gaccagcgcc gccgtccttg ccgctgcgaa
      301 ggctgaaggg gttccgataa ggatcgcgca ctgtcatgcc gctcgaagcc ggggacgcga
      361 attccagaca gcgcgccaca ggctccgccg cgcgatagca attgcctggc tgaagcgggt
      421 ggcgacgcgc cgcctcggga tcagcgaagc ggcgatcgag gagatcgccg gtcacggctg
      481 gcgcacgcag gctggcgctt caatcctact ctacggcttc gacttcagcc gcttccgcgg
      541 agcgggcaag agggcggcgc agctccgccg agaccttgga ttgggcaagg ctcccgtcgt
      601 cgggcatgtc ggacgccttg agcccgtcaa gaaccacgca ttcctgctca aggccttcgc
      661 cgccttgctc gagcggatgc cggaagcgcg gcttgtgcta gtcggcgacg gcccgatccg
      721 cgccgagatc gagcagctga ccaagtcgct tggtttgggc gagcgcgtgc acttcgcggg
      781 ggcaagcgac gaggttccag cctacatggc gatgttcgac ctattcgccc tcacctcatt
      841 cagcgaaggg ctgggaatcg tctgcctcga agcgcaggcc gcgggcacgc cggcgatcgt
      901 ttccgacgcg gtgccgctcg aggtgtcgat cgtgcctggg gcagtccagc acctcgcgct
      961 ctccgcgggt gcgaacgaat gggcgcgaaa gatgtgcgag acgctgcagc agccgccggc
     1021 cccggcggac gaatggctgg cccaggtcga gggtagcgcg ttcgggctgc aacgctgcat
     1081 cgacgagctc gacgagctct acaggtcgga gctccagcgg gcgggggtat gaactctccg
     1141 ccctcgttcc tcatcccgta aagtcagtcc cacgcccgca aatcgagtcc gaaatcgcgg
     1201 gcgagcctgt cgttgaaggg ccggaatttc tcgtcgagcc tggccaaggc cgcgcaatcg
     1261 tcggcgctcc tttcctcctc gactgctttt gcctgcaacg acccgtacag ccctttcagg
     1321 aaggttttga gaaagcccgc cggagccctc ctccccaccg cccgcgcaat ccgttgcaag
     1381 cgcccgcttc ggacggccac ggttcggttg cgcggagtga aatcgtaatt gtcgtagaag
     1441 gacgggtcga ttccaagcca gcgacagagg tcctggattg cggctcttgg atctgcgcgc
     1501 atcgcttcga acagcaaaat gcgtacgcgc tccttgccga ggcggtcccg ccataaggtc
     1561 agataatcga catagcagct gtactggaag tcgcgcgcga gcacataggc gctaggtccg
     1621 aacgcgcgat cgggtgagta ttcagccgat ccgctggtga tgcgatcggc gaactccgcg
     1681 aaggacaggt ctgcgcggac gtggccgaga ttgttcttgc tataggcgaa cgacgagaac
     1741 agtcgctccg acggcttcct caacacgaac agcaggcgcg gccgcgtcgg cagggaggct
     1801 agcacttcga gcgccgtttg ctggtacagg taatgggtgg tcgcctcgag gacgacctcg
     1861 tgccgctcgg cgcagttccg gaaaaagccc gcataggcgt cgagcccatg gtcgcgaaaa
     1921 ttgcagtcgc gccggcggag cgggttgtcc tcgtccatca ggaagaacga ttccttgatg
     1981 ctcgacccgc acgcctgcgg atgatcggcc agccagttga aaagggaact cgtgccgcac
     2041 ttcggggcac cgccgatgac caggttcggg aaggtcattg gggcaacgtc acctgcttcg
     2101 ggcacgggcg cgacggaagg tcgccgggct taactccatc gagccgggat aaaggcttgc
     2161 ccttgcaccc gcaatccagc cgcttccgaa cccggtccat cgccttgaca tcggttcggg
     2221 cgcgaaggaa cgctgggcaa tggctttcgc aagcaacact tcggatttgc accggcccgg
     2281 tcgcactgcc gggttgcccg gccttgacga aacgtgggcc tgaacgacgt gagccttccg
     2341 ccagttctgt tcgtccttcc gcaaaccgat gctgtcgcca acggcgggat tgccagcatt
     2401 agtgagatca tcggccgaat gcgcctgcat cggccgatca tcgtcaccga ccgcgaaacc
     2461 ccccgcgtgg agcagtggcg gcgggaaggc atcgaaacgc acgtcgttcc gcagacagcg
     2521 tcggcagggt tcctgagcaa cccgatcggc accattcgca gctatcttcg ctatgggcgg
     2581 gtgcttcggc ggctgcttga ccaatcgggc gccaagatca tccatgccaa caacccgctg
     2641 tccgtccagc tctccgccgc tgccgcgaag ctgaccggta cgaaactgat cctgaatcag
     2701 cgagcctcat tcggcgccca tcgccagccg tcgcgattga aatatcggct gatcttcgcc
     2761 gcagtcgatc acgtgctttt tctgtcggag gacatggcgc gacggtggcg cgaacacgtg
     2821 ccgaacgccg gccgatcata cagcgtgacc tattcggcgg tcgatccgaa aaggtttttc
     2881 ccgaccccgg caagctccgc ggacgaaccc gtagtactca tttcagcact tatccgcccg
     2941 ctaaagggac agctcgagtt ccttcgccac gtggcgccca agctggcaga aagcggcgtc
     3001 aaaatctggt ttgccggcga cttccagccc gctcgcgacc gctacatggc gcaatgcgcg
     3061 gaggcggcgg cccccctcgg cgattccgtc cagttcctcg gctatcgagc cgacattccg
     3121 gagctgatcg caagggcgtc ggtgatcgcc gtgacgtcgc atcacgaagg gcttgtccgc
     3181 gcgatgatcg aggcgatggc ctgcggacgc ccggtcgtga gctttgaagt atgctcagca
     3241 tccgaagtcc tcgaaaagca gtccggcggc gccggatcag tgatcgcgca gggcgattat
     3301 gaaggcatgg ccgaggcaat tctgcgctac tgccgagacc acgacctcgc cgcggatgcg
     3361 ggggagaaag gcgcagcgac cgcgtccagc cttttcgacc cggacgcagt ggtcagccgc
     3421 tatgagggag tctatcaaag gctcgcattg ggggaccgag gcgccggcag cctcgcacag
     3481 gtggagcagc aatgactgaa cagccggtaa agagcgcgcc ccacaaactc aggaagacac
     3541 cggacaggct ccctaagagc gtcccggaac gggcgctcgc cctcgcccgg atgtggaacg
     3601 attcgcggcg cgccgcccgc catgacgatt ccattttcat ccacattccg aagaacggcg
     3661 gaacgtcggt ctatacgatg cttcactccg ccggcctggt gaagctgaac agcctgcgcg
     3721 cggtgcagct gttcttccgg ggcaagggcc gggtcacgtt cggccacatg gcagtcggtt
     3781 cgctggtgga gcttggaatg gttccgcagg actatgtcga ccgcgcgttc aagtttgcgc
     3841 ttagccggga cccatatgcg cgcgccgctt cgctctaccg gatctattgc aagatgaccg
     3901 cgacctggca ccgccaggcc agctttcacg actttctgaa aatgcttgcg gatggctatt
     3961 acaaccgcat cggcccgtac gacagtctcg ggatgtcacc ttgcaatccg caggtcgcat
     4021 ggctccgcga tacgccgccc gacaagatct acagggtcga agatctccgc gaattcgcgg
     4081 acgacatcag cgaacggtgg aaaatcgcga agcccgatct cgtgcacatg aactggacaa
     4141 gccggagcac cgagctgaac ctttccccgg acgagaaagc gttgatcaaa gaagtatatc
     4201 gcgacgattt cgagaccctc ggctatgaca aataggccgg gggtgagacg gtggcgatcg
     4261 cggtgacctc gtccgaggcg ccggaccagc ccgatgcggc tggcaagaat gcggtaagcg
     4321 atggacgcga aattgctccg cttttgattc acatcggctt ccacaagacc ggctcgacgt
     4381 ggcttcaaca ggaactgctc gataatccgg cattcggctt caccacgcaa acgggcgaga
     4441 cgcgccagca gatcatcatg cgcgtcggcg ttcccgatcc actgtcgtac gatgcgacgg
     4501 cggtcgcgtc tcactatgca ccggcgatcg acgaagcccg caaatcgggc ctgaccttgg
     4561 ccctctcgca cgagcgcttg tccggacacc cttcgtccgg cggccgcgac cgctgcatga
     4621 ttgccgaccg attgaagagc acctttccgg aatcgcgaat cctgatcgtg ttcagggaac
     4681 aacggtcgct gatccagtcg atgtacagcc agcacatcag cgcaggagga gtggagtcgc
     4741 ttcgccgata tctcacgacg ccggagccgg gatggctgcg aaaaccgagc ttcgcgttcg
     4801 agctgtacga attcgacacg cttatccgct actatcagca gctgttcggc accgatcgcg
     4861 ttctcgccct tccgctcgaa ctgctgcaag ccaggccagc cgaatttgcg agcaggatca
     4921 gcaccttctg cggtcaccca ccggtcgagc ctgaggatac ccgaagcaag aacgtccggc
     4981 ggccacagct catgcagctc gtccagcggc cgctcaacat gctcttcttc cacaacgacc
     5041 tgagccccgg cgcactgctg cacgtgaccc ggttccacat gcgttacggg aagtacgcgc
     5101 ggcctctgtt caatctgatt acgccaaagg tcctggacga ctggattcta aggcgccagc
     5161 gacggatcat cgattcgatg gtgggaaacc gctatgcggt cagcaaccgg cgaacccagg
     5221 agatcgtcgg gctgccgctt gccgacctcg gctatccggt aagctgatcc gatgaacgac
     5281 ttcacagcaa cctggcgaaa gctcaagcct tgatcgacgg caccgacagc gcccccgccg
     5341 ctcggctcaa gggctatttt ccccggcttc gcgaagccgt gagcctgtgg agcgaagcgg
     5401 gaaaggccgc gcgccacgac gattccatct tcatctggat tccgaaaaac gccggaacgt
     5461 cgattcacgc cgttctgcgc gattacggtt tcgtaaagct aaagagcccg cgctcggtgc
     5521 gcctttcctt ccgcggacgc gggcgggtga ccttcggcca tatggcggtc ggctcgctgg
     5581 tcgaggcagg tctggtttcg ccgcaattcg tggagcggtc attcaagttc gcgttcacgc
     5641 gcgaccctta cgctagagcc gcgtcccttt atcattatct ttccaacact tacgtgatcc
     5701 ccaactggca cgagcggccg agtttccgtc aattccttaa ccttctggcc gacggtttct
     5761 acgaccgtat cgggctctac aatacgcgcg ggctgtcgca gtgcagccct caggccgatt
     5821 ggcttcgcga caccccgccc gataagcttt atcgaatcga ggatttcggc gagttcctca
     5881 cggatatcgc cgaacgttgg ggcatttcgg caagcgagat tccgtacctg aaccggtccg
     5941 gcaaccgcgc cgagatcgag ctcgaacgcg aagacagggc cttgatcgag aagatctacg
     6001 ctgaagactt cgacatgttg ggttactccc gaaaatagtt cgcgcagcgc gtttcgggag
     6061 tcgtcgcttg gagcaggatc cgtcgagagt ggatgaagaa caccgttccc tgacccggcc
     6121 cacgctgcac agcattgcct ggataacggc aacccgcggg atgagggctc cgataacgct
     6181 tatcgcggtc gccgtcctcg cccgactcct caccccggcc gacttcggca tcgtcgcgat
     6241 cggaatgatc ttcgtgacct tctccgatac gctcatcgac ggctccttcg gaatggtcct
     6301 gatccagcgg cgcaaaatca cgccggctgt aatcggcgcg accctgttcc tttcggcagc
     6361 tttggccctc gtcgtttccg ccggagttgc gatcctgtcg ccgttcatcg aacgcgagtt
     6421 cgacttccct cagctctccg cggtcctcct gttgcttgcc gcggcgctgc ccatcaccgc
     6481 gatcacggcg gtgaccagtt cgcttttgca gcgcgcgctg gagcttcgca ttctcagtct
     6541 catcggcgtc ggctcgcagc tggcctacgt aattgcagcg atcggttttg cggtcgcggg
     6601 catgggattg tggtccctgg tctgggcgca gatgttgcaa tggctggtgg acgcagctct
     6661 ccagttcctc acggttcgca agaagtatcg gctcggcttt tcgctcgccg gcgttcgcga
     6721 cgtgctcggc accggcggca tgttcacgat ctcgaagatg ctcaaatggg ccgccaacag
     6781 tgccgacaag gttatcatcg ggcgctttct cggcgcttcg gagcttggct tctacagccg
     6841 tgcctcgacc ttgatgagaa gcgcgcgcca gctcgccggc gccggaccga tgcgggtgct
     6901 gttttccagt ttcgccaaga tgcagcacga tccgccgcgg atgcgcaaag cctacaatcg
     6961 ggccctgtcg gcatccctta tcgtgtcgac gctcgtgtcc gggtttgtga tcgtcgatgc
     7021 ggaattgatc gtcaggatcc tgctcggccc ccagtggctt gccaccatcc cgatcatcca
     7081 gctgctgttc tttgccttca ttccgaaaac cgcggctgta gttgcggagg cggtacccct
     7141 ggcattcggc ctgggcggag caagtgcgct tagggagggc gcgcaactga cgctggtgat
     7201 catcggtgcg gccatcggcg cgcaattcgg agtggtcggc gccgctgccg gggtgtgtat
     7261 agccttctgg ctattttacg tcatcagcct caagctggtt cacactctgc tccagacgac
     7321 ttggctggag atgcttggag tccatagcgc tggcatagcg gtggcactgc cacccgtcct
     7381 tctcgccctt gggaccgcct ggctggttcc ggacggcggc atcctgcttc aactggtgcc
     7441 tgccgctgtc tttgcaatcg cggcacttgt cgtgctgttg gtggggcccg cgtcgctcgt
     7501 gagcgacgat gtcgttcgcg cacgcgcact gcttcacgaa aagctgcagc cctacgcggc
     7561 gaggttcgtc ggccgaagct agcggttgtg gcgcgcgtcg gaaatgtctc gaaggcgacg
     7621 aaagaagtcg ctccggcggc ttcgcaagat ctccggatcg tacgagcggg ccgtgtcgcg
     7681 atccgcacgg ctcgccattg cgatctccga agggtcgcta gccaggcgcc gtacgatctt
     7741 cgctagagcg gccacgtcgc cgggccggtg cagacggttg gaaggaagca gttcgggaat
     7801 tccgccacag gtcgagccga tgcacgcggc gccgcggctc attgcctcga tggtcgcgcg
     7861 aggaagcccc tcgtgaaagc tcggctgcaa atagatgtcg atctcgtcta gccagcccga
     7921 aacgccctcg cctgcgcttc gagtgccgtc gaaatgcacc aggtctgaaa cgccgttttt
     7981 ctcagtgagg gccacccaag gctcggtgtc tccgggaccg agcacccggt aggtcaggtc
     8041 cagccctgaa gccctgaccc gagcgagcgc cggaatggcg gtctgaatgc ccttcgattt
     8101 gacccgcagc gaagccaccg tgccgaggat cggcggacgg cctgcggcca attccttcag
     8161 ccgtcgttcg cggctggcgc gagcggagtc ggtgaccggc acgatttcga cattcgaggc
     8221 aatcgccgcg acgccgtcgg tcgggtaacg gccctgaagc cattttgcag tgacgtagag
     8281 gaccattggc gcggatttca ccgctctgcg ggttcggtga accatgacag gcgcgtacag
     8341 gcgcgccgca ggcgagccgt ggtgggtcag ggcatcccag gggcaaccga ccagttcgat
     8401 ggcatagggc ttccccaacc gctgggcctc ccgcacggcc ataaggccga tttcgctggg
     8461 aagcctggcc acaacggcgt ccgcccagtc gattgcgctg cccatcctgg cggtcgcttc
     8521 ggcggagggc gcggcgagct ggcgaagcga agagaggctg ggaaggaagt cgaacgaaac
     8581 cccgtctcga tccgaccggg cgagattggc tccgtcggca accggcggcc ccgcccggct
     8641 gaccacgcgc agttcgtcga aatgctccag atagcgatcc caggccgaag ccgcgaaaga
     8701 cgtcggcgta tagactgctc cgccgggcgc ggatcgaaat tggtgatcgt gcgcaaacag
     8761 tatccgcatc cgctactgtc ccgctgtccg cttcaatggc tgataccctc ggccttcatg
     8821 aacttcagca ccgttcgccc gaggatcttc aggtcgaaaa gcagcgacgt ccgcgcgcaa
     8881 tattccgcgt catattcgac cttgaccggg atcggcaaat catcccggcc gctgacctgc
     8941 gccagcccgg tgagcccggg aacgaggcga tgaacaccgc gcttcgtccg catctctatg
     9001 agatcgtcct gattgaacag ggccggcctt ggcccgacta cgctcatgtc gccgaccagc
     9061 acgctccata gctggggaag ctcgtcgaga ctggttcgtc ggagccacct gccgatcggg
     9121 gtgacccact tgcccggctc cgtcatcagg tgcgttgcca tctgcggcgt gtctgcccgc
     9181 atcgttcgaa atttgggcat ctcgaaaatc acattgtcgc gccctaccct ttgcgaccag
     9241 tgaagggcgg ggcccggcga cgacaggcgg atcacaaccg cgattatgag catcggcagc
     9301 gcaagaaccg ccaggccgaa tgcgctgaca aggatatcga acaggcgctt gatcatgacg
     9361 agccgccgac tgtgatttca agcgcccgct cgaacgatac cggcgggctc cagtcgaatg
     9421 tttcgcggaa acggctgccg tcgaacgcgg aatcgccgat caggctctcg acccggtctc
     9481 cgaggacgaa ctggctggcg cgccgtacga ggacggctgg aaccggcggg acgaacgccg
     9541 gccggccaag gaggcgaagc agcgagcggt acaactgacc cgtggaaatc ggcggcgaat
     9601 cggtcacgat gaacgtgcct tctccacttg cgccagcagc agtgaccacg gcgtcggcga
     9661 ggttctccga aaagatgaag ctgcgtcggt tccgtaccga ccccaggggc agcggaaggc
     9721 cgaacttcgc gcaccgcatc agcatcctga aataggcccc gacaccgggg ccgaaaacgg
     9781 tcggcgggcg cagcgaaacg acggctattc cacgttcgcg cccaacttcg gccaggcgca
     9841 agtctgcttc cagcttgctt cgtccgtagg ggcttcgcgg ccgcggctcg gccgaatcgt
     9901 ccaccggcct gcccggaggc gtgaccgatg tgacggctgc tacgctgctg agctggacga
     9961 agcgcgaaac cccgcaatcc gcagcttgat tgagcagcct gaccggaagg tcgcggttgg
    10021 cggcgcggta ggctgcttcg gggtcggcct cggtttcgcg agtgacatgg actcgggccg
    10081 cgcaattgac gacgacatcg cacccctcca gcgcgtcggg agacacgtcc tccctcgtca
    10141 aatcccctgt tcgcacgacc tcgacgggcg agttaaatcc gtgatcgtcg cgacggacga
    10201 gcgctcgcac atcgtgtccg ttggcaacgc aatttcggac gatcgcgcgt ccaacgaagc
    10261 cgctcgcgcc agtaatcaac aacctcatgg ttcgtagcga ccctgcgaag actcgctcac
    10321 tgaagagccg cgccggcggc gggcattgcg gccgcgccag gcgcaaagcg ccctctcggt
    10381 ttcgcgacgg cgtatttccg ccgtggtacc aggaaggtcg cgatgtagca tacgcccaac
    10441 aagcccaggc tttgttcgaa gtcgaccagc gggatcgtgc cgattttgaa gccggttagg
    10501 aacaaagcaa aaaatacgac cgcgaagggt gacggaaaac ggcgccagaa cgcgttgtag
    10561 gcgatgcgta tcagcgcccc gtagagaagc gacagaagta gaaccccccc gattccgaag
    10621 ttccagtaca tctcggtcgg cggcgcgacc ggagttccga aggcctcgct cgaagccccg
    10681 aggaacatct gcgcatagag cgagcccggc cccctcggct tgtcctccca aatggtccgc
    10741 ggaacgatcg ctcccagcgc agccatatat gtcgacccga gcatcgggcc cccggtaacc
    10801 tcgaagcccc tagcaacgat cgggatctgt gccgaaatcg ctcgccggcc ctccagctcc
    10861 tgctgcacgt ggagcagcga ctcctcgatt cccgtggacg accagacttc gccggcgtct
    10921 tgcccggtcc aggtcgacga tcgaaccgct cccagcaggc caagggacac aaacaggaat
    10981 ggcgccagga tcagcgccgt cctccatggc acccgctgtt tgcgcaatgc ccagatgacg
    11041 ccggccacca ttggaacctc gagggccctg ctgcgcgagc cgttgcttat gaactgggtg
    11101 acggtgatgg cggccagaca ggcgaggaaa atcggcgact ttgcgtcatc cgggcgagcc
    11161 gcgatccaca gatagagcgc gatcgttccg aggcgggagg ccacgatgat gggcccggca
    11221 cctgaaagct cgcgaaagcg gcccagtccc agcgacgtga cgtgagcgat gattccgccg
    11281 cgtgaataga cgaaagcgag gagcaccagc aggctgaggc cgatcaagga gagaaggacg
    11341 ccctggaaaa cgcggctgtc cgggagcacc agcggaagcc gaggcttcgg gcggaccttg
    11401 aacaaccaga atcctgcgta agtgcacagg agcgcgataa tctcgatcgt gttgtatttg
    11461 gcggtggcca tccacacggt cgtcggcgag tgcgatggca atcctaaata gaacgggaca
    11521 ttgaccggca agccgacgag gacgccgccc cagccaccca aatcctggat gacttgggga
    11581 agctgcgaaa tcagcggcca cacgacgact gccatcaaga ggggatgaag gattcccagg
    11641 cggtggttcg agagcaccag gatcggcaac aatagcag
//
LOCUS       DATAKH010000186        10289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_19026,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000186 DATAKH010000000
VERSION     DATAKH010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 10289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10289
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19026"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1269
                     /gene="mutS"
                     /locus_tag="VHN55_07760"
     CDS             <1..1269
                     /gene="mutS"
                     /locus_tag="VHN55_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003042283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX2803858.1"
                     /translation="AGLESRYRDSTRIPSLKIRHNAVLGYHVEVAARHADKLMAPDSG
                     FTHRQTLAGVVRFNSPELHDEAARVVEAGGHALALEAAHLDELSALAVGASSKVLATA
                     EALARIDVAAANAQRAAEGGWCTPEVTDEPCLEIEAGRHPVVESALAGSGERFVANDL
                     SLGRDDRLWLISGPNMGGKSTFLRQAALIVLLAQAGCFVPATRAKVGLVDRLFSRVGA
                     SDNLARGRSTFMVEMVETAAILAQATPQSLVILDEIGRGTSTYDGLAIAWAVVEAMHD
                     QAKCRTLFATHYHELTRLSGRLDALSLHHVRAREWKGDLVLLHEVADGAADRSYGIAV
                     AKLAGLPPAVVARAKAVLARLEAGRDATGGIAAGLDDLPLFAASAEAEPAADPLADAL
                     AAIEPDTLTPREALDSLYRLKALWAERSTG"
     gene            1266..3965
                     /locus_tag="VHN55_07765"
     CDS             1266..3965
                     /locus_tag="VHN55_07765"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEX2803859.1"
                     /translation="MNAPFDPIEDRRAIVDPRKVGDQLHGASSARAAKILAKALDRGR
                     KEIARRLRARPGRGRAAARSTAYLHSQLVRLAYEYVVGDEPPEMAIVGIGGTGRGEMA
                     PFSDLDLMFLSRAKPSSEIEKTVEALLYLLWDMQLKVGHSLRSIPELLTFAGKDMTVR
                     TAFLESRLLWGSEDIFEEAWRRFRSKIVAGSGAEYVASKLAERDERHIKMGDSRYVVE
                     PNVKDGKGGLRDLQTLYWIGKYIYDVREPAELVAVGLLTADEFTSFERAERFFWAVRC
                     HLHLEAGRPEERLSFQYQKAIAERMRYADRPGKSAVERFMHFYFLNAKTVGDLTGVFL
                     AQLDEKMARTGFRFALPTIRRRPKALAGFVLDRGRLSIPSDDFFSADPVRLIELFALA
                     AREGLEIHPAAMRAAARDARLVKARVRKDPRANALFLEALTNPKSPDMVLRWMNEAGV
                     FGRFIPDFGRVVAQMQFDMYHHYTVDEHAIRAIGLLAAIERGDLRDDHPLSTALFGQI
                     GSRRVLYVAVLLHDIAKGRGGDHSVLGAEVALKLCPRLGLDEAETETVAWLVRYHLLL
                     SSTAFKRDLADPKTIDDFVRQVQSPERLRLLLILTVVDIRAVGPGVWNEWKRLLLRNL
                     FDAAEEKLRLGHKQRGRSEIVVQRQEGLAKALGWKAKIARAYARRLPDSYWLAEPPEV
                     QLSNARQVAQAEAQIGDSVPSVVAEDETERGATRISVFTPDREGLFFRICAGLASAGA
                     SIIDARIHTTRDGMALDNLLVQDGRGRPYSDKRVRNRLVRSVESAIAGDSPPEIAPPK
                     RDGARLEAFHVAPSVAIPERASSRTSVVEVNALDRPGLLARLARAIHDSGFEVHSAHI
                     ATYGERAVDVFYLSTSSGRKLSKDQTDGLRTALLDAAHETDPS"
     gene            complement(3972..5570)
                     /locus_tag="VHN55_07770"
     CDS             complement(3972..5570)
                     /locus_tag="VHN55_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006834044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX2803860.1"
                     /translation="MATATPRGGLFGRVKPLDAILATAEKKGLHRTLGAVQLTLFGVG
                     CIIGTGIFVLTSVGAQKAGPGLMLSFIIAGAVCVVAALCYAEIASMAPVAGSAYTYSY
                     AVQGEFLAWTVGWALLLEYAVGASAVSVGWSNYFTDTVMARSWGIDVPSFLKAGPEAL
                     GGQVGGFINLPAALIALLVTWLLMIGTTESARVNAVLVAIKITALTAFVVLTVPAIQS
                     SNLEPYTPGGMFGGFGSGVGVVGAAATMFFAYVGFDAVSTAAEETKNPQRNVPIGLIG
                     SLLICTVFYILVSWGAVGSMGGQPIMGPDGAPLGTGTPELARACATPEFAQALVCSRE
                     PLAHVLHTLGYGVVGNMIGYAAFLALPSVILILLFGQTRIFFVMARDGLLPEKLAEVH
                     PKWKTPHICTLITGLVVAIGAAFFPVGQLADIANAGTLYAFLMVAVAVWQLRRADPGR
                     HRPFRVPAIWLVAPLTILGCLFLFFNLPKEAMLVLPIWGVIGIVIYFLYSYRASHLGR
                     GLVEVPETVVHEIDPSSPGYDERR"
     gene            complement(5642..6019)
                     /locus_tag="VHN55_07775"
     CDS             complement(5642..6019)
                     /locus_tag="VHN55_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEX2803861.1"
                     /translation="MPIDATQAYDDSNIFAKILRGELPCKKVYEDEWALAFHDINPLA
                     PVHILVIPKGPYVSWDDFSDKASDQEMSGFVRAVGKVARDQQLEVQGYRLLANTGKRA
                     GQEVPHLHVHIFGGQPLGPMLAR"
     gene            6078..6557
                     /locus_tag="VHN55_07780"
     CDS             6078..6557
                     /locus_tag="VHN55_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HEX2803862.1"
                     /translation="MTDETPESLIPYDEIVQEALRDVVGRVLGEVEKSGGLPGEHHFY
                     ITFRTKVPGVSIPKHLAERFPEEMTIVIQHRYWDLKVEDEAFSVGLSFGGVPASLRVP
                     FAAVTDFVDPAVDFSLKFQANGAEPVPDEHDQAENDSPVAEAEDGSNVVTIDFKRKK"
     gene            6661..8052
                     /gene="fumC"
                     /locus_tag="VHN55_07785"
     CDS             6661..8052
                     /gene="fumC"
                     /locus_tag="VHN55_07785"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019832026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEX2803863.1"
                     /translation="MTNTRTETDSFGPIEVPGDAYWGAQTERSIENFPFGRREQMPVE
                     IVHAFGFVKQAAARVNAREGLLDAEIAEAIQQAAAEVARGDLDTQFPLVIWQTGSGTQ
                     SNMNANEVIAGRANEKLTGKRGGKSPVHPNDHVNKSQSSNDSFPTAMHIAAARSLTAK
                     LLPSANEMQAQLAKQAKAWDSIVKIGRTHLQDATPLTLGQEFSGYSAQLGANIERLEQ
                     ALPRLYQLAQGGTAVGTGLNAPKGFGPAFAREVANLTRLPFTSAPNKFAEMAAHDTMV
                     ELSGALNTLAVSLNKIANDIRLMGSGPRCGLGELKLPENEPGSSIMPGKVNPTQCEML
                     TMVAAQVMGNHVAATIGGMQGHLELNVFKPLIGANVIRSINLLATGMQSFTKRCLEGL
                     EPDKERIAELMNRSLMLVTALAPEIGYDKAAEIAKLAHKTGKTLKEAGLELGHIDEET
                     FDRVVKPDAMVGR"
     gene            8086..8451
                     /locus_tag="VHN55_07790"
     CDS             8086..8451
                     /locus_tag="VHN55_07790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803864.1"
                     /translation="MLLSACTSIAPSGAPISGQWGGSHIGLTLDASGGRLEYDCAAGT
                     IGPVIPASDGTFAAEGMHTPGTGGPEIEGQSRPTFPAAYSGRASGDRMTLQGRLSNGV
                     ELGPFELRRGAEPGIFRCL"
     gene            complement(8464..8838)
                     /locus_tag="VHN55_07795"
     CDS             complement(8464..8838)
                     /locus_tag="VHN55_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX2803865.1"
                     /translation="MKDPNNPVCQTIAGLLQRIGDKWSVLVVETLGDGSKRFNELRRE
                     IPSVSQRMLTLTLRNLERDGLVNRTVTPSIPPRVDYELTELGKSLQGPICGLVRWSRD
                     NVGAIHEAREKYDREQAELEAA"
     gene            8973..9509
                     /locus_tag="VHN55_07800"
     CDS             8973..9509
                     /locus_tag="VHN55_07800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX2803866.1"
                     /translation="MTTLHIDSSINGENSASRLITRSIVDRFGSDNIIYRDLAADPLP
                     HLTERGQDAYVLDEFLAADTVVVGAPMYNFTLPTQLKAWIDRILVAGKTFRYTKTGPE
                     GLAGDKRVIVALARGGIYDKGSPAEALEHLESYLRGIFNFIGIEPEFVAADGLNISPK
                     HRDESIAGAIGETVRLAA"
     gene            9603..10079
                     /locus_tag="VHN55_07805"
     CDS             9603..10079
                     /locus_tag="VHN55_07805"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX2803867.1"
                     /translation="MFRKTLISAALLGSLMFATPAPAGPAEDATTAVTTMLDKFNAGD
                     VDSFYAAHEDGAIIIDEFPPYLWGGANSAQNWVGDYMKDATARGVTGGRVDYEKPTQA
                     VSDGKSAYVVLPATYRFEQGGKKMAGKGSMTFVMHKIGGAWKVASWTYAGATPVPE"
     gene            complement(10087..>10289)
                     /locus_tag="VHN55_07810"
     CDS             complement(10087..>10289)
                     /locus_tag="VHN55_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007164015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEX2803868.1"
                     /translation="VNPPQVAIIAVNKIDEKLVPIDGDIEIRKRMNLSLSCDHRVVDG
                     WDAASFLADLKPLIENPLRLLS"
BASE COUNT         1893 a         3329 c         3378 g         1689 t
ORIGIN      
        1 gccggacttg aaagccggta ccgggattcg acgagaattc cgtcgctcaa gatccgccac
       61 aacgcggtcc tcggctatca tgtcgaggtt gccgcccgcc acgccgacaa gctgatggcg
      121 ccggacagcg gctttacgca ccggcagaca cttgccggag tggtccgatt caactcgccc
      181 gagcttcacg atgaggcagc gcgggtggtc gaagccggcg ggcacgcgct tgcgctcgaa
      241 gcggcgcatc tcgacgagct gagcgccctt gccgtcgggg catcgtcgaa ggttctcgcg
      301 accgccgaag cactcgctcg gatcgacgtc gccgccgcga atgcgcagcg ggcggcggaa
      361 ggcgggtggt gcactccgga ggtcaccgac gagccgtgcc tcgaaatcga ggccggccgg
      421 catccggtgg tggaaagcgc gctcgccggc agcggtgaac gcttcgtcgc caacgacctc
      481 agcctcggcc gtgacgaccg cttgtggctg atcagcggtc ccaacatggg cggcaagtcg
      541 actttcctca ggcaggctgc gctgatcgtc ctcctggcgc aggcggggtg cttcgtcccg
      601 gcgactcggg cgaaggtcgg gctggtcgac cggctgttca gccgggtcgg cgcttcggac
      661 aatctggcgc gcggccgctc gacgttcatg gtcgaaatgg tcgagaccgc cgcaatcctc
      721 gcccaggcga ctccgcagag cctggtgatc ctcgacgaga tcgggcgcgg gacctcaacc
      781 tatgacggcc tcgccatcgc ctgggcggtg gtcgaggcga tgcacgacca ggcgaagtgc
      841 cggaccctgt tcgcgaccca ttatcacgag ctgacgaggc tttcgggccg gctcgacgcg
      901 cttagcctcc accatgtccg cgcccgcgaa tggaagggcg acctcgtcct tctccacgaa
      961 gtcgccgacg gcgccgccga ccgaagctac ggaatcgcgg tagccaagct cgctggcctg
     1021 cctcccgcgg ttgtggcccg cgcgaaggcc gtgctggcga ggctcgaggc ggggcgggac
     1081 gcaacgggcg ggatcgctgc cgggctggac gatctgccct tgttcgcggc gagcgccgaa
     1141 gcggagcctg cggccgaccc gctggccgac gcgcttgcag cgatcgagcc ggacacgctc
     1201 accccgcgcg aggcgctcga ctcgctgtac cggctcaagg ccttgtgggc cgagcggagc
     1261 acgggatgaa cgcgccgttc gatccgatcg aggaccgccg cgcgatcgtc gatccgcgca
     1321 aggtcgggga ccagctccac ggtgcaagtt cggccagggc cgcgaagatc ctcgccaaag
     1381 cgctcgaccg cggccgcaag gaaatcgcca ggcggcttcg cgcgcgaccg ggacggggcc
     1441 gggcggcggc gcgctcgacc gcttaccttc attcgcagct ggtccggctc gcctatgaat
     1501 atgtcgtcgg cgacgagccg ccggagatgg cgatcgtcgg cattggcggg accgggcgcg
     1561 gcgagatggc gccgttcagc gacctcgacc tgatgttcct gtcgcgcgct aaaccgtcga
     1621 gcgaaatcga aaagaccgtc gaggcgctgc tgtacctgct gtgggatatg cagctgaagg
     1681 tgggccactc gcttcgctcg atcccggagc tgctgacctt cgccggcaag gacatgacgg
     1741 tccgcacggc cttcctggaa tcgcggctgc tgtggggaag cgaggacatt ttcgaggagg
     1801 cgtggcggcg cttccggtcg aagatcgtcg ccggctcggg cgccgaatat gttgcatcca
     1861 agctcgccga gcgcgacgag cggcacatca agatgggcga cagccgctat gtcgtcgagc
     1921 ccaacgttaa ggacggcaag gggggcctgc gcgacctcca gacgctctac tggatcggca
     1981 agtacatcta cgacgttcgc gagcctgccg agctggtcgc tgtcgggctg ctcaccgccg
     2041 acgagttcac ctcattcgag cgggccgagc ggtttttctg ggcggtccgc tgccacctcc
     2101 acctcgaagc ggggcggccc gaggaacggc tcagtttcca ataccaaaag gccatcgccg
     2161 agcgcatgcg ctacgccgac cggcccggca aatccgccgt cgagcggttc atgcacttct
     2221 atttcctcaa cgcgaagacc gtcggcgacc tgaccggagt cttccttgcc cagctcgacg
     2281 agaagatggc tcgcacgggc ttccgcttcg ccttgccgac gatccggcgg aggccgaagg
     2341 cgctcgcagg cttcgtcctc gaccgcgggc ggctttcgat cccatccgac gactttttct
     2401 ccgccgaccc ggtgcggctg atcgagctgt tcgctctggc cgcccgcgaa ggtctcgaaa
     2461 tccatccggc ggcgatgcgc gcggcggcga gggacgccag gctggtcaag gctcgagtcc
     2521 gaaaagaccc ccgcgcaaac gccttgttcc ttgaagctct caccaatccg aagtcgccgg
     2581 acatggtgct tcgctggatg aacgaagccg gcgtgttcgg ccgcttcatc cccgacttcg
     2641 gccgggtcgt cgcccaaatg cagttcgaca tgtaccacca ttatacggtc gacgagcatg
     2701 cgatccgcgc gatcggcctg ctggcggcga tcgagcgggg cgacctcagg gacgaccacc
     2761 cgctatcgac cgcgttgttc ggacagatcg gctcccggcg ggtgctttac gtcgccgtgc
     2821 ttctgcacga catcgccaag ggccgcggcg gcgaccatag cgtcctcggc gcggaggtcg
     2881 cgctgaaact gtgccctcgg ctcggcctcg acgaagcgga aacggaaacg gtcgcgtggc
     2941 tggtccgcta tcacctgctg ctgtcgtcca ccgcgttcaa gcgcgacctc gccgacccca
     3001 agacgatcga cgatttcgtc cgccaggtgc aaagcccgga gcggctccgg ctgctgctga
     3061 tccttacggt cgtcgacatt cgcgctgtcg gaccgggcgt gtggaacgaa tggaagcgcc
     3121 ttcttcttcg aaacctgttc gatgccgccg aggaaaagct gcggctcggc cacaagcagc
     3181 gcggccgtag cgaaatcgtc gtccagcgtc aggagggact cgccaaggcc ctcggctgga
     3241 aagcgaagat cgcgcgcgct tacgctcgcc ggctgcccga cagctactgg ctggccgagc
     3301 cgccggaagt gcagctgtcg aatgcgcgcc aggtcgcgca ggcagaggcg caaatcggcg
     3361 attccgtccc aagcgtcgtc gccgaggacg aaaccgaacg cggtgcgacc cggatcagcg
     3421 tattcacgcc tgaccgcgaa gggctgttct tccgaatttg cgcggggctg gcgtcggcgg
     3481 gcgcgagcat catcgatgcg cggatccaca cgacgcgtga cggcatggcg ctggacaatt
     3541 tgctggtcca ggacgggcgc ggccgtccct attcggacaa gagggtgcgc aaccggctgg
     3601 tgcgatcggt cgaatccgca atcgccggcg attcgccgcc ggagatcgcg ccgccgaagc
     3661 gggatggcgc acggcttgag gcattccatg tggcgccgtc ggtggccatc ccggagcggg
     3721 cgtcgagccg gacttcggtt gtcgaggtca atgcgctcga ccggcccggg ctcctggccc
     3781 ggcttgcgcg ggccatccat gatagcggct tcgaagttca ttcagcccac atcgccacct
     3841 acggcgagcg cgcggtcgac gtattctacc tcagcacgtc ctcaggccgg aaactgtcga
     3901 aagaccagac ggacggcctg cgcacggcgc ttctcgacgc cgcgcacgaa accgatccat
     3961 cctagaacct cctagcgccg ctcgtcgtaa ccgggactgg acgggtcgat ctcgtgcacg
     4021 accgtctccg gaacctcgac caggccgcgg ccgagatggc tcgcccggta ggagtagagg
     4081 aagtaaatga cgatcccgat gacgccccag atcgggagca ccagcatcgc ttccttcggc
     4141 aggttgaaga acaggaacag gcagccgagg atggtcagtg gcgcgaccag ccagatcgcc
     4201 ggcaccctaa acgggcgatg gcggccggga tcggccctgc gaagctgcca cacggctacg
     4261 gcgaccatca ggaaggcgta gagcgttccg gcattggcga tgtcggccaa ctggccaacc
     4321 gggaagaagg ccgcgccgat cgcaaccacc agcccggtga ttagcgtgca gatgtgcggg
     4381 gttttccact tcgggtgcac ttcggcgagc ttctcgggaa gcagtccgtc gcgagccatg
     4441 acgaagaaga tccgggtctg gccgaacagc aggatcagaa tgaccgaggg aagcgccagg
     4501 aaggccgcat agccgatcat gttgccgaca acgccatatc cgagcgtgtg caggacgtgg
     4561 gccagcggtt cacgcgaaca aaccagagct tgcgcaaatt ccggtgtcgc gcaggcccgg
     4621 gccagctccg gcgtcccggt gccgagcgga gcgccgtccg gtcccatgat aggctggccg
     4681 cccatcgatc cgaccgcgcc ccacgacacc aggatgtaaa agacggtgca gatgagcagg
     4741 cttccgatca gtccgatggg tacgttgcgc tgcgggttct tggtttcctc cgccgcggtc
     4801 gagaccgcgt cgaaaccgac ataggcgaag aacatcgtcg ccgcggcgcc gaccactccg
     4861 acacccgaac cgaagccgcc gaacatcccg ccgggcgtat aaggctctag gttgctgctc
     4921 tggatcgcgg ggacggtcag gacgacgaag gccgtgaggg cagtgatctt gatcgcgacc
     4981 agcaccgcat tgacccgtgc gctttccgtc gttccgatca tcagcagcca cgtcaccagc
     5041 agggcaatga gcgccgccgg caggttgatg aacccgccga cctggccgcc gagcgcttcc
     5101 ggcccggcct tcaagaagga cgggacgtct atcccccaac ttcgagccat gaccgtgtcg
     5161 gtaaaatagt ttgaccagcc gaccgacacc gccgaggccc cgaccgcata ttcgaggagc
     5221 agcgcccagc cgaccgtcca ggcaaggaat tcgccctgga ccgcatagct atacgtgtag
     5281 gccgacccgg caaccggggc catcgaggcg atttcggcgt agcacagggc agcgacgacg
     5341 cagaccgcgc cggcgatgat gaacgaaagc atcaggccgg ggccagcttt ctgggcgccg
     5401 accgaggtca gcacgaaaat gccggttccg atgatgcagc cgacaccgaa caaggtcagc
     5461 tggacagcgc cgagggtgcg gtgaaggccc tttttctcgg ccgtggcgag aatagcgtcg
     5521 agtggcttaa cgcggccgaa gagtcccccg cgcggtgtag ctgtggccat cagtctcccc
     5581 tgaatccaga tttggcgcgg agcctagcgg ctgctgcggc cggcgcaacg gccaaaatcg
     5641 actagcgcgc caacatcggc cccagcggct gccctccgaa gatgtggaca tggaggtgcg
     5701 gcacctcctg gccggcgcgc ttgccggtgt ttgcgagcaa ccgatagccc tggacttcca
     5761 gctgctggtc gcgagcgacc ttgccgaccg cgcggacgaa gccgctcatt tcctggtccg
     5821 aggccttgtc cgaaaaatcg tcccacgaga cgtatggccc cttcggaatg acgaggatgt
     5881 ggaccggtgc gagcggattg atgtcgtgga aggcgagcgc ccattcgtct tcatagacct
     5941 tcttgcatgg cagctcgccg cgaaggatct tcgcgaagat gttgctgtcg tcataagctt
     6001 gcgtggcgtc gattggcact atcagctcca ttcaagtccg cttgaccggg aacgcttcct
     6061 cgttaccacc ggaagcgatg accgacgaga ctcccgaaag cctgattccc tacgacgaga
     6121 tcgtgcagga ggcgctgcgc gacgtcgtgg gcagggttct gggcgaggtc gagaagtcgg
     6181 gcgggcttcc cggcgagcat catttctaca tcaccttccg gaccaaagtg cccggcgttt
     6241 cgatccccaa gcacctggcc gagcggttcc cggaagagat gacgatcgtc atccagcatc
     6301 gctactggga cctcaaggtc gaggacgaag ccttctcggt cggcttgtcg ttcggcggcg
     6361 ttccggccag tctccgagtg ccgttcgcgg cggtaaccga cttcgtcgat cccgcagtcg
     6421 atttcagcct caagttccag gccaatggcg cggagccggt tcccgacgaa catgaccagg
     6481 ctgaaaacga ctcgccggtt gccgaggccg aggacgggtc gaacgtcgtc accatagatt
     6541 tcaaacggaa gaagtagcgc ggaagcgtca tgctggactt gatccggcac ccgccttcta
     6601 cttagcggcg gaaaagaaca ggcggatccc ggctcatggc cgggatgacg gaaggaagcg
     6661 atgaccaaca cccgcaccga aaccgacagc ttcgggccga tcgaagttcc cggcgacgct
     6721 tattggggcg cgcagaccga gcgctcgatc gagaatttcc cgttcggccg gcgtgagcag
     6781 atgccggtcg agatcgtcca cgcgttcggt ttcgtgaaac aggcagcggc tcgggtaaac
     6841 gcgagggaag gcctgctcga cgccgagatc gccgaagcaa tccagcaggc ggcggcggag
     6901 gtcgctcgag gtgacctcga cacccagttc ccgctcgtca tctggcaaac cgggtcgggc
     6961 acccagtcga acatgaacgc gaacgaagtg atcgccgggc gcgccaacga gaaactgacc
     7021 ggaaagcgcg gcggcaagtc gccggtccat cccaacgatc acgtcaacaa aagccagtcg
     7081 tcaaacgaca gctttccgac ggcgatgcac atcgccgcgg cgcggtcgct gacggcgaaa
     7141 ctgcttccct cggcgaacga gatgcaggcg cagctcgcca agcaggcgaa ggcgtgggac
     7201 tcgatcgtaa agatcgggcg aacccacctt caggacgcga ctccgctgac cctggggcag
     7261 gaattttccg gctattcggc gcagctcggg gccaacatcg aacggctcga gcaggcgctt
     7321 ccgcggcttt accagctcgc ccagggcggc accgcggttg gaacgggcct taatgctccg
     7381 aaggggttcg gaccggcctt cgccagggaa gtcgcaaacc tgacgaggct gccgttcact
     7441 tcggccccca acaagttcgc cgaaatggcc gcccacgaca cgatggttga gctgtcgggc
     7501 gcgctcaaca cgctcgcggt atcgctgaac aagatcgcca acgacatccg gctgatgggc
     7561 tcgggcccac ggtgcggact tggcgagctc aagctccccg agaacgagcc gggaagctcg
     7621 atcatgccgg gcaaggtcaa tccgacgcag tgcgagatgc tgacgatggt cgccgcccag
     7681 gtgatgggca accatgtcgc ggcgaccatc ggcggcatgc agggacacct cgagctcaat
     7741 gtgttcaagc cgctgatcgg cgccaacgtg atccgctcga tcaacctgct tgcgacggga
     7801 atgcagagct tcaccaagcg ctgcctcgaa ggtctcgagc cggacaagga gcggatcgcc
     7861 gagcttatga accgctcgct gatgctggtg accgcgcttg cgcccgagat cggctacgac
     7921 aaggcggcgg agatcgccaa gcttgcgcac aagactggta agacgttgaa ggaagccggc
     7981 ctcgagctgg gccatataga cgaagagaca ttcgaccgcg tggtgaagcc ggacgcgatg
     8041 gtcgggcgtt gagcctccat gaggccggcc gccttcctct gtcttgtgtt gctgagcgca
     8101 tgcacgagca tcgcgccgtc cggcgcgccg atctccggcc agtggggcgg cagccacatc
     8161 gggctgaccc tcgacgcatc gggaggccgc ctcgaatatg attgcgcggc agggacgatc
     8221 gggccggtga tccccgcctc ggatggcacc ttcgccgccg agggaatgca tacgcccggg
     8281 accggcgggc cggagatcga aggccagtcg cgcccgacgt tcccggccgc ctacagcgga
     8341 agggccagcg gcgaccggat gaccttgcaa gggcggcttt ccaatggcgt cgagctgggg
     8401 ccgtttgaac tgcggcgcgg agccgagccg ggaatcttcc gctgcctcta gggcagcgcg
     8461 ccgtcacgca gcttcaagct cggcctgctc gcggtcatat ttctcgcgcg cctcgtggat
     8521 cgcgccgaca ttgtccctcg accatcgcac caatccgcag atcgggccct ggagcgactt
     8581 gccgagctcg gtcagctcat aatccacccg cggcgggatg ctgggggtga cggtgcggtt
     8641 gacgaggccg tcgcgctcga ggttgcggag agtcagagtc agcatgcgct gcgacacgct
     8701 cgggatttcg cggcgaagct cgttgaaccg cttcgatccg tcgccgagcg tctcgactac
     8761 cagcacgctc cacttgtcgc cgatccgctg aagcaggccg gcgatcgtct ggcagacggg
     8821 gttgttgggg tccttcatct cactgctcca gtcactggct gttccctggt cacaactttg
     8881 tgcgtcggcc acaggaaggt gcgttcttgc ggaccactcg catgtggtta tttagggtgc
     8941 ctcagtaaca aatccatacc taggaggcaa tagtgaccac ccttcatatc gacagcagca
     9001 tcaatggaga gaacagcgcc agccggctca tcacccggtc gatcgtggac cggttcggca
     9061 gcgacaacat tatctatcgc gaccttgccg ccgacccgct gccgcacctg accgaacgcg
     9121 gccaggacgc gtacgtgctc gacgaattcc ttgccgccga cacggtggtg gtgggggccc
     9181 cgatgtacaa tttcaccctt ccgacccagc tcaaggcgtg gatcgaccgt atcctcgtcg
     9241 ccggaaagac cttccgctac accaagaccg ggcccgaggg gctggcgggc gacaagcgcg
     9301 tgatcgtcgc cctcgcccga ggcgggattt acgacaaggg ctcccctgcc gaagcgctcg
     9361 agcacttgga gagctatttg cgcggaatct tcaatttcat aggcatcgag ccggaattcg
     9421 tcgccgccga cggcctcaac atcagcccca agcatcgcga cgagtcgatt gccggcgcga
     9481 ttggcgagac cgttcggctc gctgcctgat cgttgacccg cggacgaagg aggcgcagcc
     9541 tcttctgtcc gcgcagccat ttgactggcg cctgtaagag ttcttggaaa aagggggcca
     9601 ggatgttcag gaagactttg atttcggcag ccctgcttgg ctcgctgatg tttgcgaccc
     9661 cggcgcctgc cggtcccgcg gaagatgcga cgaccgcggt cacgaccatg ctcgacaagt
     9721 tcaacgcggg cgatgtcgac tccttttacg cggcgcacga ggacggggcg atcatcatcg
     9781 acgagttccc cccatatctg tggggaggag ccaattccgc acagaattgg gtgggcgact
     9841 acatgaaaga tgcaaccgcg cgaggcgtga ccggaggccg ggtcgactac gaaaagccga
     9901 cccaggcggt cagcgacggc aagtccgcct acgttgtgct tcccgctacc taccggttcg
     9961 agcaaggcgg caagaaaatg gccgggaagg gcagcatgac atttgtcatg cacaagatcg
    10021 gcggcgcgtg gaaagtcgcc agctggacct atgcgggagc cacgcccgtc cctgagtgac
    10081 tcggcgctag ctcagcagcc gcagcgggtt ttcgataagc ggcttcaggt cggcgaggaa
    10141 gcttgcagcg tcccagccgt cgacgactcg gtgatcgcag ctcagcgaca ggttcatccg
    10201 cttgcggatc tcgatgtcgc cgtcgatcgg gaccagtttc tcatcgatct tgttgactgc
    10261 gatgatcgcc acctgcggcg ggtttacca
//
LOCUS       DATAKH010000187         6552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_19057,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000187 DATAKH010000000
VERSION     DATAKH010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6552
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19057"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VHN55_07815"
     CDS             <1..345
                     /locus_tag="VHN55_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008996335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEX2803869.1"
                     /translation="IEEEIFYPACEGKVDEDLLKEGYVEHDAAKLLIAEIEAGEPSDE
                     FYDAKMKVLCEEIDHHVKEEEKRMEGLFAQARKAGLDMDSLGQQLAERKAELLKKTES
                     GTLPAPELTTMG"
     gene            complement(377..1726)
                     /locus_tag="VHN55_07820"
     CDS             complement(377..1726)
                     /locus_tag="VHN55_07820"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2803870.1"
                     /translation="MKTGILYTALVALAFQPGIAEAKKKPVAPVAAAPVQLPYRSANL
                     PTSGQVRAFYANWRFAPIWFSGNAVKPAANDLIEILRRAPLDGIPMGPQYAVQAQAAV
                     QQASVVGSPENIAFAEHTLSEALVLYAQMMERPVTGMIYGSNALKPKTSSADTVLRMA
                     AGSRPLESYVRQLANPNTVYTSIRDAAWQQMKASGSLYVDPRVVANLDRARGMPARGR
                     FVLVNPATQMLTMYENGVPVDSMKVVVGSLHKYNLPTPMISSTIYYVVHNPYWNVPHH
                     LVRKMAPNVLSRGMSYLKSNGYEVMTDWTGDAKPVDPTTVDWKAVAAGDVQIRLRQKP
                     RGDNSMGDLKFPFDNPEGIFLHDTPKKEYFQLASRDLSNGCVRLEDAKRFARWLLRRE
                     PVRPAEGAEVFEQLPQGVPVYVTYLTAQPQNGQLTFVKDIYGWDPAVGGSTQVAAGQ"
     gene            complement(1872..2420)
                     /locus_tag="VHN55_07825"
     CDS             complement(1872..2420)
                     /locus_tag="VHN55_07825"
                     /inference="COORDINATES: protein motif:HMM:NF004785.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2803871.1"
                     /translation="MKQLAFALAVTGAFALAVPAHPAQASQSYEARVTASAASRAAHA
                     DMVATFGHDHVKPGKYLWRDVPESAGDERVVISLGEQLAYIYRGNELMAVASTSTGSK
                     GHETPSGVFTVQLKKEMHRSRKYENAPMPFAQFITDYGVALHAGHNPGHPASHGCIRL
                     PAKFAKKLFAVTNVGTPVLIGA"
     gene            complement(2546..3742)
                     /locus_tag="VHN55_07830"
     CDS             complement(2546..3742)
                     /locus_tag="VHN55_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014076740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HEX2803872.1"
                     /translation="MTQFGIDRLLAEPELRKPLDGKRVALVAHPASVTADLTHSLDAL
                     AAAGVNLTAAFGPQHGLRGDKQDNMVESEDFTDRIHNIPVFSLYGEVRRPTSQMLSTF
                     DTVLIDLQDLGCRIYTFITTLLYVLEAAAETGKSVWVLDRPNPAGRPIEGMTLREGWE
                     SFVGAGPIPMRHGLTLGELGKWFVDHFHLDVDYRVIEMEGWRADEAPGFGWPEERVWI
                     NPSPNAPNLNMARCYAGTVMLEGATLSEGRGTTRPLELFGAPDIEPRKVMAEMERLAP
                     EWLAGCRLREINFEPTFHKHVGKLCSGVQIHAEDGFYDHDSFRPWRLQALAFKAIRQL
                     YPDYDLWRDFPYEYTFGKLPIDVINGSPLLREWVDGAGVPADLDALAVPDERAWEDER
                     RRYLLY"
     gene            complement(3753..4289)
                     /locus_tag="VHN55_07835"
     CDS             complement(3753..4289)
                     /locus_tag="VHN55_07835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DOMON-like domain-containing protein"
                     /protein_id="HEX2803873.1"
                     /translation="MQLILFPHPSTPPADPLFKVWATVDHVASLSSVATTNIWFGVGA
                     PAERFVIPEAEEPGRADELWKTTCFEAFLQPAGGHNYREWNFAPSGDWAAYDFSGYRE
                     DMAEAEVAEPYIRAEDNFTWWALGATITAAADQQWQLGLSAVLEEKNGSKSYWALAHP
                     NSDKPDFHATDCFAAKLA"
     gene            4343..5566
                     /gene="tyrS"
                     /locus_tag="VHN55_07840"
     CDS             4343..5566
                     /gene="tyrS"
                     /locus_tag="VHN55_07840"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010238007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEX2803874.1"
                     /translation="MAEFRSDLLKLLNERGYIHQVTDAQALDALAQKGPVTGYIGFDA
                     TAPSLHVGSLVQIMMLRRMQQAGHRPVVLMGGGTTKVGDPSGKDESRKLLTDSDIAAN
                     IAGIRRVFERFLDFGDGPTGAILLDNAEWLDGLEYLPFLREVGRHFTINRMLTFDSVR
                     LRLDREQPLTFLEFNYMILQAYDFLKLSRRVACRLQLGGSDQWGNIVNGIELTRRVDG
                     TEVFGLTTPLITTATGEKMGKTAQGAVWLNADQLSPYDYWQFWRNTDDSDVGRFLRLF
                     TDVPLDKIAHLESLPGAEINEAKIALADAATAMLHGEQAARAAQETARATFEQGGTGE
                     DLPTLSVGDGMNIAHALTAIGFTPSNKEAKRKIAEGAVRLNDDPVSDPGLIVQVSGDP
                     VKLSLGRKRHGLLVR"
     gene            complement(5563..6006)
                     /locus_tag="VHN55_07845"
     CDS             complement(5563..6006)
                     /locus_tag="VHN55_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2803875.1"
                     /translation="MAVLIPILLVFIAGAMVAIQAPTNALLAKAGGSPVLAALISFIV
                     GTIGLFVVWLGSGNRPGTAAFDGLPWYAWIGGLYGAIFVAVAAYAAPKIGVASLITIG
                     IGGQIAMALILDHVGAMGLDREPINFGRVAGAALVIAGVVLVRRS"
     gene            complement(6020..>6552)
                     /locus_tag="VHN55_07850"
     CDS             complement(6020..>6552)
                     /locus_tag="VHN55_07850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX2803876.1"
                     /translation="MKGPEKDAVMAAFASGDLAVLVATTVIEVGVDVPNATLMVVEGA
                     ERFGLAQLHQLRGRVGRGSGKSTCLLIRGTSLTETGRARLALMRETNDGFRIAEEDLR
                     LRGPGEILGTRQSGEEGFRVAKPEDVEDLAPIAQSDAQLLLDRDGGLAAPRGQAARVC
                     LYLFERDQAVGLIRSG"
BASE COUNT         1233 a         2038 c         2102 g         1179 t
ORIGIN      
        1 atcgaggaag aaatctttta ccccgcctgc gagggcaagg tcgacgagga cctgctgaag
       61 gagggctacg tcgagcatga cgccgccaag ctcttgatcg ccgagatcga ggcgggcgag
      121 ccgagcgatg aattctacga cgcgaagatg aaggtgcttt gcgaagagat cgatcaccac
      181 gtgaaggaag aagagaagcg catggagggc ctcttcgccc aggcgaggaa agcaggtctc
      241 gacatggatt cgctcggcca gcaactcgcc gagcgaaagg cggagctgct caagaagacg
      301 gagagcggga cactgccggc gcccgagcta acgacgatgg ggtaaagcgg tttctggcgg
      361 gcggcgggag cgcggcctat tgcccggccg caacctgcgt gctgccgccg accgccggat
      421 cccatccgta gatgtccttg acgaaagtca gctgaccgtt ctgcggctgc gccgtcaggt
      481 aggtgacata gaccggcacg ccctgcggaa gctgttcgaa cacctctgcg ccctcggcgg
      541 gcctgaccgg ctcacggcgg aggagccagc gggcaaagcg cttagcgtcc tcgagccgaa
      601 cgcagccgtt gctgaggtcg cggctcgcca actggaaata ttccttcttc ggcgtgtcgt
      661 ggaggaagat gccctccgga ttgtcgaatg gaaatttcag gtcgcccatc gaattgtcgc
      721 cgcggggctt ttgccgcagg cgaatctgca cgtcgccagc agcgacggcc ttccagtcga
      781 cagtggtggg atcaaccggc ttggcgtcgc cggtccagtc ggtcatcacc tcatagccgt
      841 tcgatttgag ataagacatg cccctgctga gcacgttcgg cgccatcttg cgaaccaggt
      901 ggtgcggcac gttccaatag ggattgtgca ccacgtaata gatcgtgctg gaaatcatcg
      961 gcgtcggcag attgtacttg tgcagcgatc cgacgacgac cttcatcgaa tccaccggca
     1021 cgccattttc gtacatggtc agcatctgcg tggcgggatt gacgaggacg aaccgccccc
     1081 gcgcgggcat tccgcgcgcg cggtcgagat tggcaaccac ccgcggatcg acataaagcg
     1141 atcccgacgc cttcatctgc tgccaagccg catcgcgaat cgaagtgtag acggtattcg
     1201 ggttcgcgag ctgccgaacg taggattcaa ggggccgaga gcctgcagcc atgcgaagca
     1261 cggtgtccgc gctcgaagtc ttcggcttga gagcgttgga gccatagatc attccggtaa
     1321 ccggccgctc catcatctgc gcgtaaagca ccagagcctc agacagcgta tgttccgcaa
     1381 aggcgatgtt ttcgggcgag ccgactaccg aggcctgttg caccgcagcc tgggcctgga
     1441 ccgcatattg aggccccatc gggattccat cgagtggcgc acgccggaga atctcaatca
     1501 agtcgttcgc ggccggcttg accgcgttgc cgctgaacca gatcggggca aaccgccaat
     1561 tggcgtagaa ggcccgcacc tgccccgacg tcggcaggtt cgccgatcga tagggaagct
     1621 ggacgggcgc cgccgcaacc ggtgcgaccg gcttcttctt cgcctcggcg atgccgggct
     1681 ggaaagcgag tgcgacgagc gcggtgtaga ggatccccgt tttcatatcg ttgaattaga
     1741 tgaacggttc atgcttaaca atgcatgagc agcgaggcct tgttcggtaa gtgacgggga
     1801 gtgaccgaaa agactcaccg cgccgacagc aggttccacc ggcgcggtga aatgttttaa
     1861 agaagtctct cttaggcgcc gatcaacacg ggcgttccga cgttcgtaac cgcaaaaagc
     1921 ttcttggcga acttcgccgg caaacggata cagccatgcg acgcggggtg ccccggattg
     1981 tgcccggcat gcagcgcgac accgtaatcg gtgatgaatt gcgcgaaggg catcggcgcg
     2041 ttttcgtatt tgcgcgagcg atgcatctcc ttcttgagct gcaccgtgaa gacgccgctg
     2101 ggagtctcgt gacccttgct tcctgtcgag gtcgaagcca cggccatcag ttcgttaccg
     2161 cggtatatgt aggcgagctg ctcgccgagg ctgataacga cccgctcgtc tccggcgctc
     2221 tcggggacgt cgcgccatag atatttgccg ggctttacgt ggtcgtgacc gaaagtcgcg
     2281 accatgtcag cgtgcgctgc tctcgatgcg gccgaggctg tcacccgtgc ttcgtaactc
     2341 tgcgacgcct gggcgggatg tgcgggtacc gcgagcgcga atgcgcccgt taccgccagc
     2401 gcgaaggcta gctgtttcat tttccatcac ctgaactttt gtgttgactt ttgcggaatc
     2461 aatgcaccgc agccgagtcg ggttcccgat atgcgccgat tatcgaaaac gcagctcgag
     2521 catatcgtcc ggaccaggaa gtaactcagt agagcaaata ccgccgccgt tcgtcttccc
     2581 aagcgcgctc atcgggtacg gccagggcgt cgaggtcggc cggcacgccg gctccgtcga
     2641 cccattcgcg tagcagcggc gagccgttga tcacgtcgat cggaagcttt ccgaacgtat
     2701 attcataagg gaaatctcgc cacaggtcgt agtcgggata gagttggcgg atcgccttga
     2761 acgcgagcgc ctgcagccgc cacggcctga acgagtcgtg atcatagaag ccgtcctcgg
     2821 cgtggatctg gaccccgctg cacaacttgc cgacatgctt gtggaaagtc ggctcgaaat
     2881 tgatctcgcg aagcctgcag cccgccaacc attccggcgc cagccgctcc atctcggcca
     2941 tgaccttgcg cggctcgatg tccggcgccc cgaacagttc cagcggccgg gtcgtgcctc
     3001 tcccctcgct gagtgtcgcg ccctcgagca tcaccgttcc cgcgtagcag cgcgccatgt
     3061 tgaggttggg agcattgggg ctgggattga tccagacccg ctcttcgggc caaccgaagc
     3121 caggcgcttc atccgcccgc cacccttcca tttcgatgac tcggtaatcg acgtcgaggt
     3181 ggaaatggtc gacgaaccat ttgccgagct cgccaagagt caggccgtgg cgcatcggga
     3241 tcgggcctgc tccgacgaag ctttcccatc cttcgcgcaa cgtcatacct tcaatggggc
     3301 gcccggcggg attgggtcgg tcgagcaccc acacgctctt gccggtctcg gcagcagctt
     3361 cgagcacgta gagcagcgtc gtgatgaagg tatagatccg gcagccgagg tcctgcaggt
     3421 cgatcaggac cgtgtcgaag gtggacagca tttggctggt tgggcggcga acctcgccat
     3481 agaggctgaa cacggggatg ttgtggattc ggtcggtgaa atcctccgac tcgaccatat
     3541 tgtcctgctt gtcgccgcga agcccgtgct ggggcccgaa agcagcggtg aggtttacgc
     3601 ccgcagccgc aagagcatcg aggctgtggg tcaggtcagc ggtcaccgat gcgggatggg
     3661 cgacaagcgc cactcgcttt ccgtcgagcg gctttcgaag ctccggctcg gcgagcagcc
     3721 ggtcgattcc gaactgagtc atgagccgct gtctaggcga gcttcgcggc gaagcaatcg
     3781 gtggcgtgga aatcgggctt gtcgctgttc ggatgggcga gagcccaata ggacttgctg
     3841 ccgttctttt cttcgaggac ggcagacagt ccgagttgcc actgctgatc ggcagccgcg
     3901 gtgatggtcg cgcccagcgc ccaccaggtg aaattgtctt ccgcccggat atacggctcc
     3961 gcgacctcag cctcggccat gtcttcgcga taacccgaaa aatcataggc cgcccagtcg
     4021 ccggacgggg cgaaattcca ctcgcgataa ttgtgccctc cggcgggctg gaggaaggct
     4081 tcaaagcatg tggtcttcca caattcgtca gctcggcccg gttcctcggc ttcggggata
     4141 acgaaccgct ccgcgggcgc gccgacgcca aaccagatat tggttgtggc gaccgagctc
     4201 aggctcgcga cgtggtctac ggtcgcccac actttgaaca acgggtccgc cgggggcgtc
     4261 gacggatgcg ggaaaaggat cagctgcacg tttgaatgct atcgcgcttt cgcggtgctg
     4321 acgagttggc taagcgcggc gaatggctga atttcgctcc gatctcctga agctgctcaa
     4381 cgagcgcggc tatatccacc aggtgaccga cgcgcaggcg ctggatgcgc tcgcgcaaaa
     4441 ggggccagtg accggctata tcggcttcga cgccacggct ccgagccttc acgtcggaag
     4501 cctggtgcag atcatgatgc tccggcggat gcagcaggca gggcaccgcc cggtggtgtt
     4561 gatgggcggc gggacgacaa aggtcggcga tccttccggc aaggacgaga gccgaaagct
     4621 actgacggac tcggacatcg ccgcgaacat cgcgggaatc cggcgcgtgt tcgaacgctt
     4681 cctggacttc ggcgacgggc cgaccggggc gatcctgctc gacaacgcag aatggctcga
     4741 cgggctggaa tacctcccct tccttcgcga ggtcggccgt cacttcacga tcaaccggat
     4801 gctgacgttc gacagcgtcc gcctgcggct cgaccgcgag cagccgctga ccttcctcga
     4861 gttcaattat atgatcctcc aggcctacga tttcctcaag ctgtcccgcc gcgtggcgtg
     4921 ccgattgcag ctcggcgggt cggaccagtg gggcaatatc gtcaatggaa tcgagctgac
     4981 ccggcgagtc gacggaaccg aggtattcgg gctgacgact ccgctgatta cgaccgcgac
     5041 cggagagaag atgggcaaga ccgcgcaagg cgccgtctgg ctcaacgccg accagcttag
     5101 cccgtacgat tattggcagt tctggcggaa caccgacgac tcggatgtcg gccgctttct
     5161 gcggctgttt accgacgtcc cgctggacaa gatcgcgcat ctcgagtcgc ttcccggcgc
     5221 cgagatcaac gaggcgaaga tcgcgcttgc cgatgcggcg acggcgatgc ttcacggcga
     5281 gcaggctgcg cgggcggcgc aggagacggc gcgcgcaact ttcgagcagg gcggcacggg
     5341 cgaggacctg ccgaccctgt cggtcggtga cggaatgaac atcgctcacg cgctgaccgc
     5401 gatcggcttc acgccttcga acaaggaagc caagcgcaag attgccgaag gcgcggttcg
     5461 gttgaacgac gacccggtga gcgatccggg gttgatcgtc caagtctcag gtgatccggt
     5521 gaagctcagc ctcggcagga agcgtcacgg cctgttggtt cgctagctcc gccgaaccag
     5581 cacgacccct gcaatcacga gcgcagcgcc ggcgactcgg ccgaaattga tcggctcgcg
     5641 gtcgaggccc atcgcgccga cgtggtcgag gatgagcgcc atcgcgatct ggccgccaat
     5701 cccgatggta atcagcgaag cgaccccgat tttaggtgca gcataggccg cgacagccac
     5761 gaaaatcgcc ccgtacaggc cgccgatcca ggcgtaccac ggcagcccgt cgaaagcggc
     5821 tgtgccaggc cggttaccgc ttcccagcca gacgacgaac aggccgatcg taccgacgat
     5881 gaacgagatg agcgccgcca gcaccgggga gccgccggcc ttggcgagca gcgcgttggt
     5941 cggtgcctga atcgccacca tcgcgccggc gatgaagacg agcaggatcg ggatcaggac
     6001 ggccatgcgt gtctccttgt cagccggatc ggatcagccc gaccgcctgg tcgcgctcga
     6061 aaaggtagag gcagacgcgc gccgcctgcc cgcgcggagc ggcgagcccg ccgtcgcggt
     6121 cgagcagcaa ttgagcatcg ctctgcgcaa tcggcgccag gtcttcgaca tcctccggtt
     6181 ttgcgacgcg gaatccttct tcgcccgact gacgggtgcc gaggatctcg ccggggccgc
     6241 gaagccgtaa atcctcctcg gcgatccgga atccgtcgtt ggtctcgcgc atcagcgcca
     6301 gccgcgccct ccccgtctcg gtcaggctgg tcccgcggat caggaggcag gtgctcttcc
     6361 ccgatccgcg gccgacgcga ccgcgaagct ggtgaagctg ggcgagcccg aaccgctcgg
     6421 cgccttcgac caccatcagg gtcgcgttgg gcacgtcgac ccccacttcg atgacggtgg
     6481 tcgcgaccag caccgcgaga tcgccgctgg caaaggcggc catcaccgcg tccttttccg
     6541 ggcccttcat cc
//
LOCUS       DATAKH010000188         9228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32765,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000188 DATAKH010000000
VERSION     DATAKH010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9228
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32765"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VHN55_07855"
     CDS             complement(<1..241)
                     /locus_tag="VHN55_07855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008602473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HEX2803877.1"
                     /translation="MAQVAEKPSKIMIPPPIGSGERLARIERARVLMRQHGIGAVIIE
                     PGASLDYFTGVQWWRSERMTAAVIPAEGDAIIVTPF"
     gene            369..1670
                     /locus_tag="VHN55_07860"
     CDS             369..1670
                     /locus_tag="VHN55_07860"
                     /inference="COORDINATES: protein motif:HMM:TIGR00710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEX2803878.1"
                     /translation="MSQQPPLTLDEMMLNGSTERPGPRPGTKETVAMLAGLMALNAFA
                     IDAMLPALPDIAGDLGVASDNDRQLVVIAYMLGFGSTQLVWGPLADRFGRKPVLAAGI
                     SLYALFALLCGVAGSFAVLIAARVMQGASAAVTRVLVVAMVRDLFESEEMARVMSLVF
                     MTFMVVPVLAPTVGQAILLVAPWRWIFVVLAAYGLVMLVWSMVRLPETLKEDHRRNLH
                     WRTIAEAAWATVREPQSRGYTLALTLVFGCLTAYIASVQQIVAEAFGAPDAVALVFAA
                     VAAPMALASWTNSRVVGTFGLRRVGHSGAAAFALVAIAHAAIAAGGGESLTVFIVLQA
                     LTMVCFAFTSANLSTLAMEHMGRIAGTASSVQGVVGTIFGALIGFTIGRAFDGTVHPF
                     LWGVAIAATAAFATVLLTEPKRLFAKRRRTTLPIPGPPAEM"
     gene            complement(1679..2761)
                     /gene="recA"
                     /locus_tag="VHN55_07865"
     CDS             complement(1679..2761)
                     /gene="recA"
                     /locus_tag="VHN55_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEX2803879.1"
                     /translation="MAAQLKVIGSGLEVPGMDRQKALEAALAQIDRAFGKGSAMKLGS
                     REKIEIDTISTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLALHAVAEAQKAGGT
                     AAFVDAEHALDPGYAKKLGVDVDELIVSQPDTGEQALEIVDTLVRSNAVDVLVVDSVA
                     ALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSRCLVIFINQVRMKIGVMYGN
                     PETTTGGNALKFYASVRLDIRRTGQIKDRDDIIGNSTRVKVVKNKVAPPFKQVEFDIM
                     YGQGVSKVGEILDLGVKAGLVEKSGAWFSYDSVRIGQGRENAKQYLTENPDVAQRIEN
                     AIRGKTEEVGEALMTGPDNDDDSAAG"
     gene            complement(2875..3231)
                     /locus_tag="VHN55_07870"
     CDS             complement(2875..3231)
                     /locus_tag="VHN55_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2803880.1"
                     /translation="MSASRSILVVEDEPLIAMMLEDFLETLGHKVHASCESVEDAVAA
                     ADKGGFDVAIIDINLNGETAWPVARKLREKEIPFVIATGGHVEPPPPEFKNVPVIEKP
                     YTVDRVSPALEQAIGS"
     gene            complement(3274..5661)
                     /locus_tag="VHN55_07875"
     CDS             complement(3274..5661)
                     /locus_tag="VHN55_07875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2803881.1"
                     /translation="MLQQELPLLDSLPVGGSSRWLVPAIAVASAFTGAGLLWIAGATT
                     AAVLFLVICGIALPAATLLTRKPQIRAPDLEQLVAAPDYSLVGAMLGLTADAAALTDS
                     EGKVLAANYTYRERFDGRPPDKLAADSESGQSVVTARAIAWREGGGCAAGIDTEAGTF
                     ALEVERVGARNDLLLWRFLKPHPSDPVTATAHRMRGKAGDTLAAAGLLAALVDPEGKL
                     IAWNSLFASRALAGQENEGALQLTNLVESTEEGQFRLVSEGEAGRPLRAVHLPIDAPG
                     GEGYSNFYLFDSPDSLPVSSSQHLQAMLEILPIGLALVDRDGRFLTMNDAFRIAASIK
                     SARPVYPGDLVVKEDKAAVADAVRRHARGPAMSGDLAVRLARNPKEPVALTIAGLRGL
                     GDAAVLLLLKDNSEEAKLKRQVAQATKMQAVGQLAGGVAHDFNNILTAIIGHCDLMLM
                     RHTPGDSDYDDIQQIKSNSTRAAGLTRQLLAFSRQQTLRPQVLHLTDVVAEVSHLLKR
                     LLGETVKLVVKHGRNLGPVRADPGQLEQVIVNLAVNARDAMATKGGGTLTIQTYTVHA
                     SQVAELGSDILPIADYSALSVTDTGCGIPPNVLGKIFEPFFTTKEVGKGTGLGLSTVY
                     GIVKQSGGFIFADSKPDEGTRFVIYLPVHRVEADAGKATRAAKPKQVELWGTGTALLV
                     EDEPMVRAVAERALTRHGYKVITATNGEEALAVIERGEEIVLLISDVVMPGMDGPATV
                     REARKSRPELPILFMSGYAEEQLRKSIDLDNVAFLPKPFSVQELAEAARRAIAEK"
     gene            complement(5679..7667)
                     /locus_tag="VHN55_07880"
     CDS             complement(5679..7667)
                     /locus_tag="VHN55_07880"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009823162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13-type metalloendopeptidase"
                     /protein_id="HEX2803882.1"
                     /translation="MPPPPEAAAAPEAAPAAKPTYGTFGFDTAGLDPAVAPGDNFYQY
                     ANGTWAKNTAIPADKSNYGMFTVLDDLSKERTRSIIDEQAKDPNSKIGHAYNSYMDQA
                     AVEAKGLAPLEPWLTEIRSLASKSGLAALYAKGDEIGISSPFRMYVGQDDKNPEQYIL
                     GMIQGGLGMPDRDYYLSNEPKLADTRAKYLQHLTNVLTLAGEQNAAARAKAILDFETE
                     IAKAHWTRTDSRDADKTYNKLTLAELEKTAPGFDFTALVHGIGANVNEVLVAQPSAFT
                     GEAAAIRKAPLSVLKDQLLVRSIDGYAPYLPKAFDDENFAFYGTTLNGTPQQEDRWKR
                     AVNFTVGALGDDVSQLYVEKYFPPETKAAADRLVKNVIAAMGRRIDQLEWMGAATKAK
                     AHAKLAAFTPKIGFPTQWRDMSGLEIRGDDLLGNAMRSNRFDHAYSVGKLGGPIRRWE
                     WGMTPMTINAYANFGLVEIVFPAAILQPPFFDPNADDAVNYGGIGAVIGHELSHHFDD
                     QGAKYDSTGKLIDWWTPGDTKEFTARLDKLEQQFNAYEPLPGMHVNGKLTMGENVADL
                     AGLTVAHDAYLASLGGNAPPVIDGTTGDQRFYFGWAQVWRRNYREANLRQRLLTDPHS
                     PSEQRANIVRNMDPWYSAFDVEPGQSLYLAPADRVRIW"
     gene            complement(7824..8306)
                     /gene="smpB"
                     /locus_tag="VHN55_07885"
     CDS             complement(7824..8306)
                     /gene="smpB"
                     /locus_tag="VHN55_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010337314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEX2803883.1"
                     /translation="MAKPLSPPFDKQKIVAENRRARFDYFVEDKFEAGIALVGTEVKA
                     LRQGEGSIAESYATIAGDEIWLINSHIPEYSHGNRMNHEPRRQRKLLLSKREIGKLHG
                     AVTRQGLTLVPLSIYFNGRGKAKVELALAKGKKAHDKRETVKERDWKREQQRLLRRSA
                     "
     gene            complement(8352..9227)
                     /gene="dapA"
                     /locus_tag="VHN55_07890"
     CDS             complement(8352..9227)
                     /gene="dapA"
                     /locus_tag="VHN55_07890"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_029994215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX2803884.1"
                     /translation="MFFGSIPALVTPFSGKCVDEDSLRKLVDWQVEQGSNALVPCGTT
                     GESPTLSAAEQKRVIELTVEAAAGRVPVIAGCGSNNIAIAIEHLHAAKDAGADAALIV
                     TGYYNKPSQAGLFAAYKALSEASELPIIVYNIPSRAVVEISVDTMAEIAKLPNIAGVK
                     DATGNLGRVTAERLACGRGFIQLSGNDETALAYNATGGVGCISVTANVAPKLCSDFQK
                     ATRDGRWDEALELHERLYPLHTALFTDASPGPVKYALSRVRPGFPADVRLPIVEASDS
                     SKRAVDAALEHAGLA"
BASE COUNT         1533 a         2956 c         2955 g         1784 t
ORIGIN      
        1 aaaagggagt tacgatgatc gcgtcgccct cggccgggat caccgcggca gtcattcgct
       61 cggaacgcca ccactgcacc ccggtaaaat agtcgaggct ggcgccaggc tcgattatca
      121 ccgcgccgat cccgtgctgc cgcatcagga cgcgcgccct ttcgatccga gcgagccgtt
      181 ccccgcttcc gatcggcggc gggatcatga ttttcgatgg cttctccgca acttgggcga
      241 tggtcggaga tggaaatgcg gatgcgacgg cggctgcagt gccggtcgcg ataaatgccc
      301 gccgatcaag ctgcacgtgg aatcgccctc ccctgttgcg agtgcctact cttgcacgac
      361 aggttcgaat gagccagcag ccgccgctca ctttggacga gatgatgctg aacggttcga
      421 ccgagcgacc ggggccgcgc cccggaacca aggaaacggt ggcgatgctc gccgggctga
      481 tggcgctcaa cgcgtttgcg atcgatgcca tgcttcccgc gcttcccgac atcgcaggcg
      541 acctcggagt ggcatcggac aacgaccgcc agctcgtcgt tatcgcctac atgctcggct
      601 tcggctcgac gcagcttgtg tgggggccgc tcgccgaccg cttcgggcgc aagccggtgc
      661 ttgccgcggg catcagcctg tacgctctgt tcgccctgct gtgcggtgtc gcaggcagct
      721 ttgccgtgct gatcgccgcg cgggtgatgc agggtgcatc ggcggcggtc acgcgcgtgc
      781 tggtggtggc gatggtgcgc gacctgttcg aaagcgagga gatggcgcgg gtcatgagcc
      841 tggtgttcat gaccttcatg gtggttccgg tgcttgcccc gactgtcgga caggcgatcc
      901 tcctggtcgc cccgtggcga tggatcttcg tggtcctcgc cgcttacgga ctggtgatgc
      961 tggtctggtc gatggttcgg ctgcccgaga cattgaagga ggatcaccgc aggaacctgc
     1021 actggcggac gatcgccgag gcagcctggg caaccgtccg ggagcctcag tcgcgcggct
     1081 acacgcttgc tctgacgctc gttttcggct gcctcaccgc ttacatcgct tcggtccagc
     1141 agatcgtcgc cgaagcgttc ggtgctcctg atgccgtcgc gctcgtcttc gccgctgtgg
     1201 cggcgccgat ggcgctggcg tcgtggacca acagccgagt cgtcggcacc ttcggccttc
     1261 gccgggtcgg tcacagcgga gccgccgctt tcgcgctggt cgcaattgcc catgcagcga
     1321 ttgcggccgg gggcggcgaa agcctgactg tcttcatcgt actgcaggcg ctgacgatgg
     1381 tctgcttcgc attcacctca gcgaacctca gcacccttgc gatggagcat atgggacgga
     1441 tagcgggaac cgcatcgtcg gttcagggcg tcgtcggcac gatcttcgga gccctgatcg
     1501 gcttcaccat cggacgcgcc ttcgacggca ccgtccaccc gttcctgtgg ggagtcgcaa
     1561 tcgcggcgac agccgcattc gccacggtcc tgctgaccga gcctaagcgc ctgttcgcaa
     1621 agcggcgacg aacgactttg ccgatccccg gaccgccggc ggaaatgtaa gcggtgacct
     1681 atccggcggc ggaatcgtcg tcgttgtcgg ggccggtcat cagcgcctct ccgacttcct
     1741 cggtcttgcc ccggatcgca ttttcgatcc gctgcgcgac gtcgggattt tcggtcagat
     1801 actgcttggc gttctcgcgg ccctggccga tccggacgct atcgtagctg aaccaggcgc
     1861 cggacttctc gaccaggccg gccttgactc cgagatcgag gatctcgccg accttggaca
     1921 cgccctgccc gtacatgatg tcgaattcga cctgcttgaa tggcggcgcc accttgtttt
     1981 tgaccacctt cacccgggtc gaattgccga tgatgtcgtc gcggtccttg atctggccgg
     2041 tgcggcggat gtcgaggcgt acggatgcgt agaatttgag ggcattgccg cccgtcgtcg
     2101 tctcggggtt tccgtacatg accccgatct tcatccgcac ctggttgatg aaaatgacga
     2161 ggcagcgcga gcggctgatc gagcccgtga gcttgcggag cgcctggctc atcagccgcg
     2221 cctgcaggcc gacgtggcta tcgcccatct ctccctcgat ctcggcgcgc ggaaccaggg
     2281 ccgcgaccga atccaccacc agcacatcga ccgcattgga acggaccaga gtgtcgacga
     2341 tctcgagcgc ctgttcgcct gtgtcgggct gcgacacgat cagctcgtcg acgtcgacgc
     2401 caagcttctt cgcgtagccg ggatcgagcg catgctcggc atcgacgaac gccgcggtcc
     2461 caccggcctt ctgcgcttcc gccaccgcgt gaagcgcgag agtcgtcttg cccgagctct
     2521 ccggcccgta gatttcgacg actcggccgc gcggaagtcc gccgaccccg agggcgatgt
     2581 cgaggccaag gctgcccgtc gaaatcgtgt caatctcgat cttctcgcgg ctgcccagct
     2641 tcatcgccga gcccttgccg aacgcgcggt cgatctgtgc gagtgccgct tcgagcgcct
     2701 tctgacgatc cattccggga acttccaatc cgcttccgat gactttcagc tgcgctgcca
     2761 tgctgttcac cccttcgtca acgggcggcc gagctccacc ctgtgaagcg atgtctgtac
     2821 cgcgtttgtt ctatgagaac aagaggggaa cgaaaatgtt gagaacgccg cccttcagga
     2881 gccaatcgcc tgttccagcg ccgggctgac ccggtcgacc gtgtagggct tctcgatcac
     2941 cggaacgttc ttgaactccg gcggcggcgg ctcgacgtgg ccgccggtgg cgatcacgaa
     3001 cgggatttct ttctcgcgaa gcttgcgggc gaccggccag gcggtctcgc cattaaggtt
     3061 gatgtcgatg atggcgacgt caaatccgcc cttgtcggca gcagcgacgg catcctcgac
     3121 gctttcgcag ctggcgtgaa ccttatgtcc gagcgtttcg agaaaatcct cgagcatcat
     3181 cgcgatcagc ggctcatctt cgacgaccag gattgaacgc gacgcggaca tgacgatgcg
     3241 gaaataaagc gacaatcgcc accggcaagt cttttatttc tccgcgatgg cgcgccgtgc
     3301 ggcttccgca agctcctgaa ccgagaaggg ttttggcaga aaagcaacat tgtcgagatc
     3361 gatcgatttg cgcaattgct cctcggcgta gcccgacatg aacaagatcg gcagctcggg
     3421 gcggctcttt cgcgcctcgc gcaccgttgc cggcccgtcc attccgggca ttaccacgtc
     3481 gctgatcaag agcacgattt cctcgccgcg ctcaatcacc gccagcgctt cttcgccgtt
     3541 agtggcggtg atgaccttgt acccgtgccg tgtgagagcc cgctccgcga cggcgcggac
     3601 catcggttcg tcctcgacga gcagggcagt gccggttccc cacagctcaa cctgcttggg
     3661 tttggccgcg cgggtcgcct tgccggcatc ggcttcgacc cggtgcaccg gcaggtagat
     3721 gacgaaacgg gtgccttcgt ccggcttgga atcggcgaag atgaagccgc ccgattgctt
     3781 gacgatgccg tagaccgtcg agaggccgag gccggtgccc ttgccgacct ccttggtggt
     3841 aaagaacggc tcgaaaatct tgccgagcac attgggcggg atcccgcagc cggtgtcggt
     3901 gaccgaaagc gcggaatagt cggcgatcgg aaggatgtcg gagcccagct cggcgacctg
     3961 gctcgcgtgg acggtgtagg tctggatggt gagcgttccg ccgcccttcg tggccatcgc
     4021 atcgcgggcg ttgaccgcca ggttgacgat gacctgctcg agctggccgg ggtcggcgcg
     4081 gacgggcccg aggttgcggc catgcttgac gaccagcttc acggtttcgc cgagcaggcg
     4141 cttcaacagg tgcgagacct ctgcgacgac gtcggtcaag tgcagcacct gcggccgaag
     4201 cgtctgctgg cgcgaaaaag cgagcagctg gcgagtgagg ccggcggcgc gggtcgagtt
     4261 ggacttgatt tgctggatgt cgtcgtaatc gctgtcgccg ggcgtgtgcc gcatcagcat
     4321 caggtcgcaa tggccgatga tcgcggtgag gatattgttg aagtcgtgcg cgacaccgcc
     4381 ggcgagctgg ccgaccgcct gcatcttcgt cgcctgggcg acctggcgct tgagcttggc
     4441 ttcctcgcta ttgtccttga gaagaagcag gactgcggca tcgccgaggc cgcgaagccc
     4501 ggcgatggtc agcgccaccg gttccttcgg gttacgcgcg aggcggaccg cgaggtcgcc
     4561 agacattgct gggccgcggg cgtgacgtcg gacagcgtca gcgacggccg ccttgtcctc
     4621 cttgacgacg aggtcgcccg gatagaccgg ccgggcgctc ttgatgctcg cagcgatccg
     4681 gaaggcgtcg ttcatcgtca ggaagcgccc gtcgcggtcg accagcgcca gcccgatggg
     4741 gaggatctcg agcatcgcct gcaaatgctg cgagctggaa acaggcaggc tgtcgggact
     4801 gtcgaacagg tagaaattgg aatagccctc gccgcccggc gcatcgatcg ggaggtggac
     4861 cgcgcgcaac ggccgccccg cctcgccttc cgaaacgaga cggaactgcc cctcttcggt
     4921 cgactcgacg aggttggtga gttgcagcgc tccctcgttt tcctgccctg ccaaagcgcg
     4981 gctcgcgaac agcgagttcc aggcgatcag cttgccttcc gggtcgacca gtgcggcgag
     5041 gagaccggca gccgccagcg tatcgccggc cttgccgcgc attcgatggg cagtggcggt
     5101 caccgggtcg ctcgggtgag gcttgaggaa tcgccaaagc aggaggtcgt tgcgcgctcc
     5161 gacgcgctcg acctcgagcg cgaaggtgcc cgcttccgtg tcgatcccgg cggcacatcc
     5221 tccgccctcg cgccaggcga tcgcgcgggc agtcacgacc gattggcccg actcggagtc
     5281 ggccgcaagc ttgtcgggcg ggcggccgtc gaaccgctcg cggtaggtat agttggcggc
     5341 tagaaccttg ccctcggaat ccgtgagcgc cgcggcgtca gcggtcagtc ccagcatcgc
     5401 ccccaccagc gaatagtcgg gtgcggcgac tagttgctcg aggtcaggcg cacggatctg
     5461 cggctttcgc gtgagcagcg tcgccgccgg caaggcaatt ccgcaaatga cgaggaacag
     5521 gaccgccgca gtcgtggcac ccgcaatcca caggagtccg gcgccggtga aggccgatgc
     5581 gacggcaatc gcgggcacga gccagcgcga gctgccgccg accggcagcg agtccaggag
     5641 cgggagctcc tgctgcagca tggcctaggc gatgccccct accaaatgcg cacccgatcg
     5701 gcgggagcaa gatagagcga ctgcccgggc tcaacgtcaa acgcggaata ccacgggtcc
     5761 atgttgcgga cgatgtttgc gcgctgctcc gacggcgagt gcggatccgt cagcaaccgc
     5821 tggcgaaggt ttgcctcgcg gtaattgcgc cgccagacct gcgcccatcc aaaatagaag
     5881 cgctgatccc cggtcgtccc gtcgataacc ggcggcgcat tgccgccgag cgacgcaaga
     5941 taggcatcgt gcgcaaccgt aagccccgcg aggtccgcga cgttctcgcc catcgtcagc
     6001 ttcccattca catgcatgcc cggcagcggc tcataggcat tgaactgctg ctccagcttg
     6061 tcgagccgcg ccgtgaactc ctttgtgtcg cccggcgtcc accagtcgat cagctttccc
     6121 gtcgaatcgt acttcgctcc ctgatcgtcg aagtgatggc tgagctcatg accgataacc
     6181 gcgccgatac cgccataatt gaccgcatcg tccgcattgg gatcgaagaa gggcggctgc
     6241 agaatcgcgg cgggaaagac gatctcgacc aggccgaaat tggcataagc gttgatcgtc
     6301 atcggagtca ttccccactc ccagcgccgg atcggacccc cgagctttcc gaccgaatag
     6361 gcgtggtcga agcggttcga ccgcattgcg ttgccaagga ggtcgtcgcc acgaatttca
     6421 aggccgctca tgtcgcgcca ctgggtcgga aaaccgatct tcggcgtgaa ggcggcgagc
     6481 ttggcgtgcg ccttcgcctt cgtggcggcg cccatccatt cgagctggtc gatgcgccgg
     6541 cccatcgccg cgatgacatt cttgaccagc ctgtcggccg cagccttcgt ctcaggtggg
     6601 aaatatttct caacgtagag ttggctgacg tcgtcgccca gggcgccgac cgtgaagttc
     6661 accgcccgct tccaccgatc ctcctgctgg ggagtgccgt tgagcgtcgt gccataaaag
     6721 gcgaaattct catcgtcgaa cgccttcggc aggtagggcg cgtagccgtc gatcgaacga
     6781 acgaggagtt ggtccttcaa caccgaaagc ggggccttgc ggatcgccgc tgcctcgccg
     6841 gtgaaggcgc tcggctgggc gacgagaacc tcgttcacat tggcgccgat gccgtgcacc
     6901 aaagcggtga aatcgaagcc gggagccgtc ttctcaagct cggcgagggt gagcttgttg
     6961 taggtcttgt cggcatcgcg gctatcggtg cgggtccagt gcgccttggc aatctccgtc
     7021 tcgaagtcga gtatcgcctt cgcgcgggca gcggcgttct gctctcctgc cagagtcagc
     7081 acgttggtca ggtgctggag atacttggcc ctcgtgtcgg cgagcttcgg ctcattcgac
     7141 aaataataat cgcggtcggg catccctaag ccgccctgga tcatgccgag gatatattgt
     7201 tctggattct tgtcgtcctg gccgacgtac atccggaacg gcgacgaaat gccgatctcg
     7261 tcgcccttgg catacagcgc cgcaagacct gatttgctgg ccaacgagcg gatctcggta
     7321 agccacggtt cgagcggcgc gaggcccttc gcttcgaccg ccgcctggtc catgtagctg
     7381 ttataggcat gcccgatctt gctgttgggg tctttggcct gctcgtcgat gatcgagcga
     7441 gtccgctcct tggacaggtc gtcgagaacg gtgaacatcc cgtagttgga cttgtcggct
     7501 ggaattgcgg tgttcttggc ccaggtgccg ttggcatatt ggtagaaatt gtcgccaggc
     7561 gcgaccgccg ggtccaatcc ggcggtgtcg aagccaaacg tgccgtaggt cggcttggcc
     7621 gccggcgcgg cttccggagc tgcggcagcc tcaggaggag gcggcatatc gactggtcgg
     7681 gtggcgcagc cggcaaggat cgttcctgct gctaggacaa cgagcagatt acgcatgaat
     7741 attcatctcc ccactacatg cctttcgtat agggggtcgg tgaaaaccgt caaaggcgat
     7801 tggggccgtt cctcaccggt aagtcaggcg cttcgccgaa gcagccgctg ctgctcgcgc
     7861 ttccagtcgc gctccttcac cgtctcgcgc ttgtcgtggg ccttcttgcc cttcgccagg
     7921 gcaagctcga ccttggcttt cccgcgccca ttgaaataga tcgagagcgg caccagcgtc
     7981 agcccctgcc gggtaaccgc gccatgaagc ttgccaatct cgcgcttgct gagcagcagc
     8041 ttgcgctgcc gcctcggctc gtggttcatc cggttgccgt ggctgtattc gggaatgtgg
     8101 ctgttgatca gccagatttc gtcgcccgca atggtcgcgt agctctccgc gatcgagcct
     8161 tcgccttggc ggagcgcctt tacctcggtc ccgaccagtg cgatccccgc ctcgaattta
     8221 tcctcgacga aatagtcgaa gcgggcgcgc cggttctcgg caacgatctt ctgcttgtcg
     8281 aatggagggg aaagcggttt tgccattgct gtcgcgctac gtagtgactt cccgccccgc
     8341 aaggtagccc gctaggccag ccccgcatgt tcgagcgcgg cgtcgacggc gcgctttgac
     8401 gagtccgatg cctcgacgat cggaaggcgc acgtcggccg gaaagccggg ccgcacccgc
     8461 gacagcgcat attttaccgg gccgggcgac gcatcggtga acaaggcggt gtgcagcgga
     8521 tacagccgct cgtgaagctc gagcgcctcg tcccagcggc cgtcgcgggt cgccttttgg
     8581 aaatcggagc agagctttgg cgcgacattg gcggttaccg aaatgcagcc aacgcccccc
     8641 gtcgcattgt aagcgagcgc agtctcgtcg tttccggaca attggatgaa gcccctgccg
     8701 caggccagcc gctcggcggt cactcgcccc aggttccccg tcgcgtcctt gactccggcg
     8761 atgttcggaa gcttcgcgat ctcggccatc gtatcgaccg aaatctcgac cacggcgcga
     8821 gaggggatgt tgtagacgat gatcggcagc tccgacgctt ccgacagggc cttgtaggcg
     8881 gcgaaaaggc cggcctggct cggcttgttg taatagccgg tgacgatcag cgccgcatcg
     8941 gccccggcgt ccttcgccgc atgcagatgc tcgatcgcga tcgctatatt attgcttccg
     9001 catccggcga tgaccggcac ccgcccggcg gccgcttcaa ccgtcagttc gatcacgcgt
     9061 ttttgttccg ccgccgaaag cgtcgggctt tccccggtgg ttccgcacgg gaccagcgcg
     9121 ttcgagccct gctcgacctg ccaatccact aactttcgaa gtgagtcttc atcgacacac
     9181 ttgccggaaa aaggggtgac cagcgccggt atcgaaccga aaaacatg
//
LOCUS       DATAKH010000189         9627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_12999,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000189 DATAKH010000000
VERSION     DATAKH010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9627
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12999"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..1057
                     /locus_tag="VHN55_07895"
     CDS             194..1057
                     /locus_tag="VHN55_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014075972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX2803885.1"
                     /translation="MDARYEILDSLEPGIARVLAHNPSAFTYTGTQTYLVGAEEVAII
                     DPGPDEPEHVDAIVEAIGGRDVIAILCTHTHRDHSPAAAPLAARTRAPIIGCAPLALE
                     TVGPRADAAFDGDYAPHRMLEDGDSIEVDGRPLTAVATPGHTSNHLCFAWEDALFTGD
                     HVMGWSTTVVVPPDGDMAAYMASLEKLRQRGDRIYFPAHGPPVTKPQQYVRSLIGHRM
                     QRERQVLRLVSEKPRDIADIVAKAYPGLDPRLTAAAGGSVYAHLLDLQRRDLVECEGE
                     LWTGIESDSPS"
     gene            1024..1743
                     /locus_tag="VHN55_07900"
     CDS             1024..1743
                     /locus_tag="VHN55_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEX2803886.1"
                     /translation="MDRDRIRLPLLIGAVVIALLLGLAIGGAGLVGSIFGGPDPKAIA
                     TSSLESMRAQNRLVVFVARYVSVTSASQSRLGLSTERTLILPGDVRYELDLSKLTQDD
                     VTWDRDSSTLAVRLPDVEIAGPEVDLANAREYGSGGLLATFTSADERLDQANRAKAVA
                     DLRSQAQSEVPMRLARQAARQAVQRSFAMPLKAAGFEKARVVARFPGEAEAEPSFLDV
                     STSYENAVKEAERRRAAERQK"
     gene            1740..2789
                     /gene="nadA"
                     /locus_tag="VHN55_07905"
     CDS             1740..2789
                     /gene="nadA"
                     /locus_tag="VHN55_07905"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEX2803887.1"
                     /translation="MTVQETSLKGLDLLAEIDRLKRERNAVILAHYYQKPEIQDLADF
                     VGDSLDLSRKAAATDADVIAFCGVRFMAETAKILSPEKTVILPDMDAGCSLEDSCPPD
                     QFKAFREAHPDHIALTYINCSAAVKALSDIIVTSSSAQTILDQIPKEQKIIFGPDRHL
                     GGYLARKSGRDMLLWPGICIVHQAFSETELLTLKAEHPGAPVAAHPECPPHIIEHADH
                     VGSTSSILAFALESPADTILVATEPHIIHQMEKAAPGKTFIGVPGGDGNCNCNMCPYM
                     ALNTLEKLYVSLRDLKPQIDLSAELMDAARRPLERMLEMAGNTVGKGDVGKPIVEDDD
                     GGVAPEDIDPTISGD"
     gene            2835..2911
                     /locus_tag="VHN55_07910"
     tRNA            2835..2911
                     /locus_tag="VHN55_07910"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2869..2871,aa:Arg,seq:tcg)
     gene            2990..3751
                     /locus_tag="VHN55_07915"
     CDS             2990..3751
                     /locus_tag="VHN55_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010187117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX2803888.1"
                     /translation="MDFGSIGVAELAGFIAVGFVAQLIDGALGMAFGVISTTLLVSLG
                     VPPAAASAGVHIAETFTTAASGTSHIMHRNVDWRLFRRLAIPGVIGGFLGAYVLTQIS
                     ASAARPFVLAYLASIGIYLVWRGIHYPPTHKPAKIVEPLGFAGGFLDAAGGGGWGPVV
                     TGNLLVQGAEPRRTIGTVNTVEFIVTITISATFIVTLGWAMFTAATIGLLAGGILAAP
                     FAGLITKKAKPRILLIFVGSVLTLTGAYGIWRALA"
     gene            3856..5952
                     /locus_tag="VHN55_07920"
     CDS             3856..5952
                     /locus_tag="VHN55_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010336731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX2803889.1"
                     /translation="MRKFALAAAAAFIATAAFAQTNDPYLWLEEIEGARPLEQVRTWN
                     AETEAELTKVPGYEERRRRALQILNNPQQIEMPDSVMGDMVANHWVDAQHKRGLWRVS
                     PLAAFVAGKPQWRTLIDVDALGAKEGESWVWHGANCLPPQYQRCLVSLSPGGGDADVI
                     REFDLPTASFVEDGFTIPVGKNSATWVDRDTLLVARVEGEGSATRSGYPRTVRQWKRG
                     TPWESAKLIAEGTEEDIAVSPFAVTDGDTRYVGVDRAVGFYEDKISILAADGRLVELP
                     MPETAEFETILGGQAIVRLIEPLGQFQPGSVVAFDVPPMLAGKTPAPTLVMAPSKSQA
                     IEQVVSSDHVLWIKALDDVSGKLFALARQANGTWARQTIPLPANSTIAIAATADKQDV
                     AFATVDGMLTPTSLVSVTPIGEVTEVDSLPPQFDASKFTVEQRFATSKDGTRVPYFLV
                     RKKGVTAPTGTLIHAYGGFRSAQTPTYLTEQPYRSGPLGLFWVEDGGAYVLANIRGGG
                     EYGPDWHKDALREKRQNSFDDLEAVARDLIASGVSRKDGIAISGRSNGGVLVGAAMTQ
                     HPDLYSAVIAGSPLFDMKRYSHLLAGASWIDEYGDPDKPADWAFMSAYSPYQNIREGV
                     EYPPVFFYLSTKDDRVHPGHARKGAAKLKAFGNTVYYHEYLEGGHSVGADRSEDAVRA
                     ALLWAFLTKEIGSGPR"
     gene            complement(5949..6368)
                     /locus_tag="VHN55_07925"
     CDS             complement(5949..6368)
                     /locus_tag="VHN55_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HEX2803890.1"
                     /translation="MMAMERERTAGLSLGSDPSSVRRRVEALERVMERLVVVPGINRP
                     MGLDVILDFVPIAGPTAAAAIGAYLAWEGRNLGLSKWQMARMGGNVGVDWLLGLIPWI
                     GAIPDFFFRSNTRNLRIIKRHLDRHHPAGATIEGRAR"
     gene            complement(6365..7852)
                     /locus_tag="VHN55_07930"
     CDS             complement(6365..7852)
                     /locus_tag="VHN55_07930"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX2803891.1"
                     /translation="MRMRLLRRSLLVALAAATVTATGGCQSEPEGVVGVVVIDGDPRL
                     VTPGTRPLTSSEAVLIDNVAQGLVSFDARGQIEPGLAETWNVSDDGLSYIFRLANGDW
                     PDGRKITAEQVARMLRKMIAPPDSDRLDDAFGAVEDIVAMTDRVLEIRLKEPRPHLLQ
                     LLAQPEMGLVREEQGTGPFTIDRANSRDGTVRLTREVALPDEEQTEREQLNLSGAKAQ
                     EAIRAFVSGTADLVLGGTFADLPYVPRDTLSRGALQFDPASGLFGLIPARDGGPMANP
                     EVRQLLSAAIDREAFIAALAVPGLVPRATVLEPGLANIPDPVPPDWATTPTVDRQPAL
                     KAAAERLFENEDKTPVIRVALPPGPGSDVLFERLSQDWGGLGIDVKRVGIDETADLRL
                     VDEVAPSAAASWFLRHFRCGAAKICAEQVDEKLDGARNAAILAQRTAFLSEASRQIDS
                     LQLFIPIAAPIRWSLVSQRISGFAGNRFAIHTLTGLERQLNRTGE"
     gene            7957..>9627
                     /locus_tag="VHN55_07935"
     CDS             7957..>9627
                     /locus_tag="VHN55_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX2803892.1"
                     /translation="MADYDGIWSRGGVNVEDLPDPFAPPPPPEPQSAEEQPAPKRRWR
                     KTRIVLWSLLALIVVTLAWLVITAPLSRALEPLPDPAMLFLSEEGKPFARRGAIKEAP
                     VEAIKLDPLTPAAFVAIEDRRFYTHWGIDPRGIGRAFVANIRAGGVRQGGSTISQQLA
                     KTSFLSADRSLKRKAQEVIISFWLEAWLTKEEILSRYLSSVYFGDGVYGLRAAARHYF
                     KRDPEKLTLAQSAMLAGLVQAPSRLAPTRHLKAAQERSRLVLRTMAETGAISERKART
                     TKLARPVSEDRALPSGTYFTDWVAPQAQQAFDSEFGQVRVTTTLDADLQRFAVRAVNR
                     ARTGEAQVALVAMRPDGRVVAMVGGKSYAKSPFNRATQARRQPGSAFKLFVYLAAMRA
                     GWTPDSIIDDSPVTIGDWSPSNSDGAYRGKITLREAFASSSNAAAVRLSQSVGRGNVI
                     RAARDLGITSRLPDKPSLALGTGGVSLLELTSAYAAILSGRYPVRARGLPDEPVLALV
                     LEHADQALGGQRSTRRERSLRLVVDPALSAFPHDQPLATLEGTLGQWSR"
BASE COUNT         1727 a         3177 c         3090 g         1633 t
ORIGIN      
        1 ggggaagccg ccgacaagat cgaggcgaca aagggcattt ccgaagaccg ccgcaacgcc
       61 ctcgtccacc agatgcgctc aaagatcgac gagttgcagg ccaaagaggc gcagtcaaag
      121 tagcgtcatt cgcgccggcg ccgccggcgg ctcggctttg ccagcgcatc tgcgccgtgg
      181 cagagcagcc atcgtggacg cccgttacga aatcctcgac tcgctggagc cgggaattgc
      241 ccgtgttctc gcgcacaatc cgtcggcttt cacctatacc ggcacgcaga cctatctcgt
      301 gggggcagag gaagttgcga tcattgatcc ggggccagac gaacccgaac atgtcgatgc
      361 catcgtcgag gcaatcggcg gccgcgacgt catcgccatc ctgtgcaccc acacccaccg
      421 cgaccacagc ccggcggccg cgccgctcgc cgcccggaca cgcgcgccga tcatcggctg
      481 cgcgcccctc gcgctggaaa cggtcggccc tcgcgcggac gctgctttcg acggtgatta
      541 tgcgccccac cggatgctcg aggacggcga tagcatcgaa gtcgacgggc ggccgctcac
      601 agcagtcgcc acccccggcc acacctccaa ccacctctgt ttcgcgtggg aggacgcctt
      661 atttaccggc gaccacgtca tgggatggtc gaccacggtc gtggtgccgc ccgacggcga
      721 catggccgcg tacatggcca gcctcgagaa gctccgacag cgtggcgacc gaatctactt
      781 cccggctcac ggcccgccgg tcaccaagcc gcagcaatat gtccgctcgc tcatcggcca
      841 tcgcatgcag cgcgagcgcc aggtgctgag actggtgtca gagaagccgc gagacatcgc
      901 ggacatcgtc gccaaagcct atccggggct cgatccgagg ctgacggccg ccgccggcgg
      961 ctcagtatac gcgcaccttc tggacctgca gcgccgcgac ctcgttgaat gcgaaggaga
     1021 gttatggaca gggatcgaat cagactcccc ctcctgatcg gagccgtcgt catcgcgctg
     1081 cttctcggcc tcgcgattgg cggtgcgggg ctggtgggaa gcatcttcgg cggccccgac
     1141 ccgaaagcga tcgcgacgtc cagcttggaa tcgatgcggg cccagaatcg cctcgtggtg
     1201 ttcgtggcgc gctatgtgtc ggtgaccagc gcaagtcagt cgcggctcgg cctgtccacg
     1261 gagcggacgc tgatcctgcc gggcgacgtc cgctacgagc tggacctgtc gaagctgacc
     1321 caggacgacg tgacctggga cagagactcc agcaccctcg ccgtccggct tcccgacgtc
     1381 gaaatcgccg gacctgaagt cgacctcgcc aacgcccgcg aatatggctc cggcgggctc
     1441 cttgcgacct tcacgagcgc cgacgagcgg ctcgaccagg cgaaccgcgc aaaagccgtg
     1501 gcggaccttc gcagccaggc ccaaagcgag gtaccgatgc gccttgcccg gcaggcggcc
     1561 cggcaggcag tccagcgaag tttcgcgatg ccgctcaagg ccgccggctt cgagaaggcg
     1621 agagtcgttg cccgcttccc aggcgaagcc gaggccgagc ctagtttcct ggacgtatcg
     1681 acctcatatg agaatgcagt gaaggaagcg gagcgccgcc gcgcggctga aaggcagaag
     1741 tgacagtcca ggaaaccagt ctcaaagggc tcgatctcct cgccgagatc gaccgcctca
     1801 agcgagagcg caacgcggtc atcctggccc attattacca gaagccggaa atccaggacc
     1861 tcgccgattt cgtcggcgac agtctagatt tgtcgcgcaa ggcggccgcc actgacgccg
     1921 acgtgatcgc cttttgcggc gtccgtttca tggccgaaac ggcgaagatt ctgtcgcccg
     1981 aaaagaccgt gatcctcccc gacatggacg ccggctgcag cctcgaggac agctgcccgc
     2041 ccgaccagtt caaggccttc cgcgaggccc atcccgacca tatcgcgctt acctacatca
     2101 actgctctgc ggccgtgaaa gccttgagcg acatcatcgt caccagctct tcggcgcaaa
     2161 cgatcctcga ccagatcccg aaggagcaga agatcatctt tgggcccgac cgacacctcg
     2221 gcggctatct cgcccgcaag tccggccgcg acatgctgct gtggcccggc atctgcatcg
     2281 tccaccaggc gttcagcgaa accgagctgc tgacgctcaa ggccgagcat cccggagcac
     2341 cggtcgccgc gcacccggaa tgcccgccgc acatcatcga gcatgccgac catgtgggct
     2401 cgaccagctc gatcctggca ttcgcgcttg aatcgccggc cgacacaatc cttgtggcaa
     2461 ccgagccgca catcatccac cagatggaga aagcggcacc cggcaagacc ttcatcgggg
     2521 tgccgggcgg cgacggcaac tgcaactgca acatgtgccc gtacatggcg ctcaacacgc
     2581 tggagaagct gtacgtcagc ttgcgcgacc tcaaaccgca gatcgacctt tcggccgagt
     2641 tgatggatgc agcccggcgg ccgctcgaac ggatgctgga aatggccggc aataccgtcg
     2701 gaaagggcga cgtcggcaag ccgatcgtcg aagacgacga cggcggagtc gcgcccgagg
     2761 acatcgaccc tacgatcagc ggcgattgat cggctctcaa ctttggtcga tagcgcgcac
     2821 cgcaagctga atgtccgctc ctagctcaac tggatagagc gccgggcttc gaacccggag
     2881 gttgggggtt caagtccctc ggagcgggcc accatcgcaa ttctctattc gcttggcatt
     2941 cccatatctc gcgtctacgg gccgccgaca gcgctgacgc tggaggtgta tggatttcgg
     3001 ttccatcggc gttgcagagc tcgccggctt catcgctgtt ggatttgtcg cccagctgat
     3061 cgacggggcg ctcggcatgg ccttcggagt catctcgacg accttgctgg tcagccttgg
     3121 cgttccgccg gcggcagcgt cggcgggcgt gcacatcgct gagaccttta cgacagctgc
     3181 ctccggcacc agtcacataa tgcaccgaaa cgtcgactgg cggctgttca ggcgcctggc
     3241 gatcccagga gtaatcggcg gcttcctggg agcctatgtg ctgacccaga tcagcgccag
     3301 tgcggcccgg ccgttcgtgc tggcctatct ggcgagtatc ggaatctacc tggtttggcg
     3361 cggcatccat tatccgccaa cccacaagcc cgcgaagatc gtcgaaccac tcggttttgc
     3421 cggcggcttt ctggatgcgg ccggaggcgg cggatggggc ccggtcgtca cgggcaacct
     3481 gctcgtgcag ggcgcggagc cgaggcgaac gatcggcacc gtgaacaccg tggagttcat
     3541 cgtcacaatc acgatctcgg cgacttttat cgtgacactg ggctgggcga tgttcaccgc
     3601 ggctaccatc ggactgctcg ccggaggcat attggctgcg ccgttcgccg gtctgatcac
     3661 gaaaaaggcg aaacccagga tccttcttat cttcgtgggt tcggtactga cgctgacagg
     3721 cgcttacggc atctggcggg ccctggcgta agcctggcaa gctgaaatcc agttctgcct
     3781 gatgctggtc gattgggggc gttgacgtcc cggcccttgc ttcgcacgat aagaacgaat
     3841 cccgggagac ataccttgcg taagttcgca cttgccgccg ccgcggcctt catcgccacc
     3901 gccgccttcg cccagacgaa cgatccgtac ctttggctcg aggaaatcga gggagcgagg
     3961 ccgcttgagc aggtgaggac gtggaacgcc gaaaccgagg ccgagctgac caaggtcccc
     4021 ggttacgagg agcgccgtcg gcgcgcgctt cagatcctga acaatcctca acagatcgag
     4081 atgcccgatt cggtgatggg cgacatggtc gccaaccatt gggtcgatgc gcagcacaag
     4141 cgcggcctgt ggcgagtctc gccgctcgcc gcttttgtcg cggggaagcc gcaatggcgc
     4201 acgctgattg acgtcgatgc tctcggtgca aaggagggcg aaagctgggt ttggcatggc
     4261 gccaattgtc tgccgccgca atatcagcgc tgcctcgtct cattgagccc tggcggtggc
     4321 gatgccgacg tgatccgcga gttcgacctg ccgaccgcca gctttgtcga ggacggcttc
     4381 acgatcccgg tcggcaagaa cagcgccaca tgggtcgatc gcgacacgct gctggtcgcc
     4441 cgggtcgaag gcgaggggtc ggcgacgcgc tcgggctatc cgcggacggt ccggcagtgg
     4501 aagcgcggga ccccttggga atcggcaaag ctcatcgccg aaggcaccga ggaggatatt
     4561 gcggtctccc cgttcgcggt gacggacggc gacacccgct acgtcggggt cgatcgcgcc
     4621 gtcggcttct atgaggacaa gatatccatt ctcgctgcgg atggtcgcct ggtcgagttg
     4681 ccgatgcccg agactgccga gttcgagacc attctcggcg ggcaggccat cgtcaggctg
     4741 atcgagccgc ttgggcagtt ccagccgggg agcgtcgtcg cattcgacgt tccgccgatg
     4801 ctcgccggga agacacccgc gccgacgctg gtgatggcgc caagcaagtc gcaggcgatc
     4861 gagcaggtcg tctcctccga ccatgtgctg tggatcaagg cgcttgacga cgtttctggg
     4921 aagttgtttg cgcttgcacg ccaggcgaac gggacctggg ctcggcagac catcccgctg
     4981 ccggcaaata gcacgatcgc gattgccgcg accgcggaca agcaggatgt cgcgttcgcg
     5041 accgtcgatg ggatgctaac cccaacctct ctggtgtcgg tgacccctat cggggaagta
     5101 accgaagttg actcgctccc gcctcagttc gacgcgtcga agttcacggt cgagcagcgg
     5161 tttgctacgt cgaaagacgg cacccgggta ccttacttcc tggtccgcaa gaagggcgtg
     5221 accgcgccga ctgggacgct gatccacgct tacggcggct tccgctcggc gcagacgccg
     5281 acctacctga ccgagcaacc ttaccgatcc gggccgctcg ggctgttctg ggtcgaggat
     5341 ggcggtgcct atgtgctcgc caatatccgc ggcggcggcg agtacggccc cgactggcac
     5401 aaagacgcac ttcgcgaaaa gcgccagaac agcttcgacg acctggaggc ggtcgcacgc
     5461 gacctcatcg ccagcggagt gtcgcgcaag gacggcatcg cgatctcggg cagatccaac
     5521 ggtggagtcc tcgtgggggc ggcgatgacc cagcatcccg acctgtattc ggcggtcatc
     5581 gcgggatcgc ccctgttcga catgaaacgc tattcgcacc tgctcgccgg cgcctcgtgg
     5641 atcgacgaat atggcgaccc cgacaagccc gccgactggg cgttcatgtc cgcatattcc
     5701 ccatatcaga acatccgcga aggcgtcgaa tacccgccgg tgttcttcta tctgtcgacc
     5761 aaggacgatc gcgtgcaccc gggccacgcg cgcaagggcg cggccaagct caaggcattc
     5821 ggaaacacgg tttattacca tgagtatctg gagggcggcc attcggttgg cgcagaccgg
     5881 agcgaggatg cggtccgcgc ggccctgcta tgggcgttcc tgaccaagga aatcgggagc
     5941 ggcccccgct agcgagcgcg tccctcgatc gtggccccgg cagggtgatg gcgatcgagg
     6001 tgtcgcttga tgatccgcag gttgcgcgtg ttcgagcgga agaagaagtc gggaatcgcg
     6061 ccgatccacg gaatgagccc tagcaaccag tcgactccga catttccccc catccgcgcc
     6121 atctgccact tggacagccc gagattgcgg ccctcccagg cgagataggc gccgattgcg
     6181 gccgccgcag tcgggccggc aatgggaacg aagtcgagga tgacgtcgag tcccatcggg
     6241 cgattgattc ccggcaccac gaccagccgc tccataactc gttcgagcgc ttctacccgc
     6301 cggcggacag aggatggatc gcttccaagg gacaggcctg cggttcgctc tctttccatc
     6361 gccatcattc gccggtccga ttcagctgtc gttccagccc cgtcagcgtg tggatcgcga
     6421 agcggttccc tgcaaagccg gagatccgct gcgacacaag cgaccagcgg atcggagctg
     6481 cgatcggaat gaacagctga agcgaatcga tctggcggga ggcttcgctg aggaaggccg
     6541 tgcgctgggc gaggatcgcc gcgttgcgcg ctccgtcgag cttttcgtcc acttgctcgg
     6601 cgcagatctt cgccgcgccg caccgaaagt gacgaaggaa ccagctggct gcagccgagg
     6661 gcgcgacttc gtccacgagc ctgaggtcgg cggtttcatc gatgccgaca cgtttcacgt
     6721 ctatcccgag gcccccccag tcttgcgaaa gccgctcgaa aaggacgtca gagccagggc
     6781 ccgggggaag cgcgacgcga atgaccggcg tcttatcctc gttctcgaac aatcgctccg
     6841 ccgccgcctt caacgccggt tgccgatcca cggtcggcgt ggtcgcccaa tccggcggaa
     6901 ccgggtccgg aatgttggcg agacctggct cgagcacggt cgcccgcggc accagcccgg
     6961 gaacggcgag cgcggcgatg aaggcctctc gatcgatagc ggcgctgagt agttgccgaa
     7021 cttcaggatt ggccatgggc ccgccgtcgc gagccgggat cagcccgaac aggcccgacg
     7081 cagggtcgaa ctgcaatgct ccacgagaga gtgtgtcgcg tggcacatag ggcaggtcgg
     7141 caaaggtccc gccgaggacg aggtcggcgg tgcccgagac gaatgcgcga atggcctcct
     7201 gcgccttcgc tcccgacaaa ttgagttgct cgcgctctgt ctgttcttcg tccggaagcg
     7261 cgacctcgcg agtgaggcgg acggtgccgt cccggctgtt ggctcggtcg atcgtgaaag
     7321 gccccgtgcc ctgctcctcg cgaaccaggc ccatttccgg ctgcgccagc aattgaagca
     7381 ggtgggggcg cggttccttc aggcgaattt cgagcacacg gtcggtcatc gcaacgatgt
     7441 cctcgaccgc gccgaacgcg tcgtccaacc gatcgctatc cggcggcgcg atcatcttgc
     7501 gaagcatccg cgcgacctgc tcggcggtga tcttccggcc atcgggccag tcgccgttcg
     7561 caaggcggaa gatatagctc aagccgtcgt cgctaacgtt ccacgtttcc gcgaggcccg
     7621 gctcaatctg cccgcgggca tcgaagctga cgaggccttg agcgacgttg tcgataagca
     7681 ctgcctcgct ggacgtgagc gggcgggttc cgggggttac gaggcgcgga tcgccgtcga
     7741 ttacgacgac tccgaccacc ccctccggct cgctctggca gccgccggta gcggtcacgg
     7801 tcgccgcggc cagcgcgacg agcagcgatc ggcggagaag gcgcatccgc atggccaaga
     7861 ccaatagccg caatgccggg ttcagcaacc gtctggccat atcgccttca ctgttttact
     7921 gatgtaaggc agttgtttcc gcggagactc cgaaaagtgg ccgattacga cggaatctgg
     7981 agccggggcg gagtgaacgt cgaggatctg cccgatccct tcgctccgcc tccgccacct
     8041 gagccgcaat cggcagaaga gcagccggcg ccgaagcgcc gctggcgcaa gacccggatc
     8101 gtcctttggt cgctgcttgc cctgatcgtc gttacgctcg cctggctggt aatcaccgcg
     8161 ccgctctcgc gcgcgctgga gccgcttccc gacccggcga tgttgttcct gtcggaggag
     8221 ggaaagcctt tcgccaggcg cggcgcaatc aaggaggcgc cggtcgaggc aataaagctc
     8281 gatccgctca cgccggcggc gttcgtcgcg atcgaggatc gccgcttcta cacgcattgg
     8341 gggatcgacc cgcgcggcat cggacgcgcc ttcgtagcca acatccgcgc gggcggagtc
     8401 cgccagggcg ggagcacgat tagccagcag ctggcgaaaa cgagcttcct gtctgcggac
     8461 cgaagcctca agcgcaaggc gcaggaagtc atcatctcct tctggctcga agcgtggctg
     8521 acgaaggagg aaattctctc gcgctatctc tccagcgtct attttgggga cggcgtttat
     8581 gggctgcgcg ccgccgcgcg ccattatttt aagcgcgacc cggaaaagct cactctcgct
     8641 cagtcggcga tgctcgccgg gctggtacag gcgccgtcgc ggctcgctcc gacccgccat
     8701 ttgaaggcgg cgcaggaacg cagccggctg gtgctcagga caatggcgga aactggtgcg
     8761 atcagcgaac gtaaggcacg caccaccaag ctcgcccgtc cagtgtccga ggaccgggct
     8821 ttgccgtccg gcacctattt caccgactgg gtggcgcccc aggcccagca ggcgttcgat
     8881 tccgaattcg gccaggtgcg ggtgacgaca acgctcgatg cggaccttca gcggttcgct
     8941 gtgcgggcgg tgaaccgggc ccgcaccgga gaggcgcagg ttgcgctggt cgcgatgcgc
     9001 ccggacggcc gcgtcgtcgc gatggtgggc ggaaagagct acgcgaagtc gccgttcaac
     9061 cgcgccacgc aggcgcgccg ccagccgggg tccgcgttca agctcttcgt gtatctcgcc
     9121 gcgatgcgcg ccggctggac gccggacagc atcatcgacg attcgccggt tacgatcggg
     9181 gactggagcc cgtcgaacag cgacggcgcc tatcgcggga agatcaccct gcgcgaggca
     9241 ttcgccagct cgagcaatgc ggccgcggtc cgactctccc agagcgtcgg gcggggcaat
     9301 gtgatccgcg ccgcccgcga tctcggaata acgtcgaggc ttccggacaa gccaagcctt
     9361 gcgctcggga cgggcggagt gagcctgctt gagctgacgt cggcctatgc tgcaatcctg
     9421 tccggccgct acccggtacg agcgcgcgga ctccccgacg aaccagtact tgccctcgtt
     9481 ctcgagcatg ccgatcaggc cctcgggggc cagcgcagca cccgcagaga gcgctcgctt
     9541 cggctcgtcg tagatccagc gctctccgcc ttcccccacg atcagccgct tgccaccctc
     9601 gaggggacgc tcggccagtg gtcgcgc
//
LOCUS       DATAKH010000190         1923 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_3752,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000190 DATAKH010000000
VERSION     DATAKH010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3752"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..>1923
                     /locus_tag="VHN55_07940"
     CDS             133..>1923
                     /locus_tag="VHN55_07940"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX2803893.1"
                     /translation="MATGARKQGKDTDARLATLPSAQLPHGMPAEMFTAPGMLAIADL
                     LPILCAFVDRDFRYRFLNKAMAEWFDKPRGEILGKTMREMLGDKAWEHREPLLQATLA
                     GERQLFVADHDHDSRGPVAVQVQYVPWEGADGRVEGIVILVDDVTEQRSAERALRESE
                     ARFRRIADSAPIMMWVTRLDRVRDFVNQAYMEFVGGSREEVQKLDWRTRIHPDDVERI
                     VAESIAGEATCEPFTLEGRYKRADGEWRWLRSVSQPRFGPDGELVGFIGAATDITVAK
                     EAELSLKALVEERTAELAMSEARFRAIFEAVLEVLCLLTPDGTIIEMNSKDAPWRAKN
                     ARDGIGKKIWEAPTLAAYPQHKGLIQGAVRTAAKGKPFTTQATMERPGVPTAYLDVAV
                     QPVRGPDGKVMYLLFEARDITELKAAQEQLRQSQKMEALGQLTGGIAHDFNNLLTVVV
                     GGLDVVSKRLEDAKLKRYATNALTAAERGARLTGQLLAFSRVQRLEVRPVEVGPLIQN
                     MRPLLRNVLGPGITKEFDLESETLAVMADPTQLEVAVLNLAINARDAMPEGGVLKFAS
                     RPVQVEGDAELDDGDYVELCISDTGTGMPPE"
BASE COUNT          356 a          594 c          705 g          268 t
ORIGIN      
        1 ggtcggaccg aagacttccg cgcatgccga cctgccgggg acaggccgga ccggacactt
       61 cagcgcagcc gacgagccgc cgtcattcaa atacgtgact cttcaaccat ttcgcgcaat
      121 cgtgtccggg cgatggctac gggggcgaga aaacagggga aagatacgga cgcccggctg
      181 gcgacgcttc caagcgcgca gcttccgcac ggaatgccgg cggagatgtt caccgctccg
      241 ggcatgcttg cgatcgccga cctgctgccg atcctatgcg cgttcgtcga ccgcgacttc
      301 cgctaccgct tcctcaacaa ggcgatggcc gaatggttcg acaagccgag gggcgaaatc
      361 ctgggcaaga cgatgcgcga gatgcttggc gacaaggcgt gggagcatcg cgagccgctg
      421 ctccaggcga ctctggcggg ggagaggcag ctgttcgtcg ccgaccacga ccatgacagc
      481 cgcgggcctg tcgcggtcca ggtgcaatat gtgccttggg agggcgccga cgggcgggtc
      541 gaagggatcg tcatcctggt cgacgacgtc accgagcagc gaagcgccga gcgggcgctc
      601 cgcgagagcg aggcgcggtt ccggaggatc gccgattcgg cgccgatcat gatgtgggtg
      661 acccggctcg accgggtccg cgacttcgtc aaccaggcct atatggaatt cgtcggcggc
      721 agtcgcgagg aggtgcagaa gctcgactgg cggacccgga tccaccccga cgacgtcgag
      781 cggatcgtcg ccgagagcat cgccggggaa gcgacttgcg agccgttcac gctggagggg
      841 cgttacaagc gcgcggacgg cgagtggcgg tggctgagga gcgtgtcgca gccgcggttc
      901 gggccggacg gggagctggt cggcttcatc ggcgcggcga ctgacatcac cgtcgcgaag
      961 gaggcggaac ttagcctcaa ggcgctggtc gaggagcgga ccgcggagct ggcgatgagc
     1021 gaggcgcggt tccgggcgat cttcgaggcc gtgctggagg tgctctgcct gctgaccccg
     1081 gacggcacga tcatcgagat gaacagcaag gacgcgccgt ggcgggcgaa gaatgcgcgc
     1141 gacgggatcg gcaagaagat ctgggaagcg ccgacgctcg cggcctatcc gcagcacaag
     1201 gggctgatcc agggcgcggt caggacggcg gcgaagggca agccgttcac cacccaggcg
     1261 acgatggagc ggccgggcgt cccgaccgcc tatctcgacg tcgcggttca gccggtgcgc
     1321 gggcccgacg gcaaggtcat gtacctgctg ttcgaagcgc gcgacatcac cgagctcaag
     1381 gcggcgcagg agcagctcag gcaaagccag aagatggagg cgctggggca gctgaccggc
     1441 ggcatagcgc acgacttcaa caatttgctg acggtggtcg tcggcggcct cgacgtcgtc
     1501 tccaagcggc tcgaggacgc caagctcaag cgctacgcga ccaacgcctt gaccgcggcg
     1561 gagcgcggcg cgcggctgac cggccagctg ctcgcgttca gccgggtgca aaggctcgag
     1621 gtgcggccgg tcgaggtcgg gccgctgatc cagaacatgc ggccgctctt aaggaacgtg
     1681 ctcgggcccg ggatcaccaa ggaattcgac ctggaatcgg agactctggc ggtgatggcc
     1741 gacccgaccc agctcgaggt cgcggtgctc aacctggcaa tcaacgcccg cgacgcaatg
     1801 cccgagggcg gagtgctgaa gttcgcaagc cgcccggtgc aagtcgaggg cgacgccgag
     1861 ctcgacgacg gcgattatgt ggaattgtgc atcagcgaca ccggcaccgg aatgccgccc
     1921 gag
//
LOCUS       DATAKH010000191         3074 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_38844,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000191 DATAKH010000000
VERSION     DATAKH010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38844"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..1069)
                     /locus_tag="VHN55_07945"
     CDS             complement(98..1069)
                     /locus_tag="VHN55_07945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX2803894.1"
                     /translation="MLTTLMTAVAVLALLFVMASVKIVHQGYRYTIEHFGRFVRVGQP
                     GFNFVPPFFYRVGRRINMMEQVLDIPGQEIITKDNAMVAVDGVVFFQVLDPAKAAYEV
                     SDLYTAILALSTTNLRTVMGSMDLDETLSKRDEINARLLVVVDEATEAWGVKITRVEL
                     KDIRPPADIVNAMTRQMKAEREKRAVILEAEGLRQSSILRAEGDKQSQILQAEGQRER
                     AFREAEARERSAEAEAKATELVSTAISKGNAQAINYFVAQKYVEALGKFATSPNAKTI
                     LFPMEATQLMGTLGGIGELAREILSEDKPESSPPKPRAQPGVPKIEG"
     gene            1139..1936
                     /locus_tag="VHN55_07950"
     CDS             1139..1936
                     /locus_tag="VHN55_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010545550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX2803895.1"
                     /translation="MNVSLEHVRSVLFLPASNPRAIVHARESASDLVILDLEDAVKSE
                     DKDNARSAAVDAVADDWPMQVAIRVNAIGTDWHSLDVDSVARSNAAFAVLPRASSARL
                     VHEVAEALSKPVLAMVETAAGVLAAAEIAKESAALVAGTNDLSADLRLPAGSGRAPLQ
                     TALQTIVLAARAAGIAVFDGVFNDLEDSEGFAAQCAEGRRFGFDGKSLIHPKQIEPCN
                     RAFSPSVSELERARRLVEAFGGGAQRFEGEMIERMHVDAARRLLDRA"
     gene            1933..2400
                     /locus_tag="VHN55_07955"
     CDS             1933..2400
                     /locus_tag="VHN55_07955"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX2803896.1"
                     /translation="MSRIVDGSLRIVLTGMHAVLRAAWFVRRPKTFGAHALALTPENK
                     IVLVKLRYAPGWRVPGGGRSEDEDPVEAALRELREEIGLVSHGDASLARDFDDLTGFK
                     RDTASLVVVRDVLYRPHRWSWEVERVCEAELDSLPSDMSEITVRWIEGLRALL"
     gene            2451..>3074
                     /locus_tag="VHN55_07960"
     CDS             2451..>3074
                     /locus_tag="VHN55_07960"
                     /inference="COORDINATES: protein motif:HMM:NF016873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEX2803897.1"
                     /translation="MAVSGERWWTVQHGPGPVVATAIHNGHDLGSETASRIAISDSER
                     LREEDPFTGEAVLDVPAHVIVHRSRFEFDLNRPPEGALYLTLEQSWGLEVWKTQPEAD
                     FVQRSLDVHSGYFRMLEQLLDGIARRHERFVLIDVHSYNHRRQGPDSPAAPVEEAPDI
                     NIGTFSMPRDHWAFLIDPLIEALRGFDFNGRRLDVRENVAFEGRGYQT"
BASE COUNT          541 a          963 c          995 g          575 t
ORIGIN      
        1 caggaacact ccgggtgcga tgatttcggc gatgagaagc aggactccgc cgatcatcca
       61 cagccagccg gaatcgatac cttcgaacat cgacatgtca gccctcgatc ttagggacgc
      121 cgggttgggc ccgaggcttg ggtggcgagg attccggctt gtcttcgctc aagatttcgc
      181 gggcgagctc gccgatgccg ccgagggtcc ccatcaactg cgtggcttcc atcgggaaaa
      241 ggatcgtctt cgcgtttggc gacgtcgcaa acttgccgag tgcctcgaca tacttctggg
      301 cgacgaaata gttgatcgcc tgcgcattgc ctttcgaaat cgccgtggag acgagctcgg
      361 tcgccttggc ttcggcctcc gccgaacgct cgcgcgcttc cgcctcgcgg aacgcccttt
      421 cccgctgtcc ctccgcctgg aggatctgcg actgcttgtc gccttctgcg cgaaggatcg
      481 aggattggcg caggccttcc gcctcgagga tgacggcgcg cttctctcgc tccgccttca
      541 tctggcgggt catcgcgttg acgatgtcgg ccggcgggcg gatgtccttg agctcgacgc
      601 gggtgatttt cacgccccaa gcctcggtcg cctcgtcgac gacgacaaga aggcgggcgt
      661 tgatctcgtc gcgcttggac aaagtctcgt cgaggtccat cgagcccatc acggtacgaa
      721 ggttggtcgt cgaaagcgcc aggattgcgg tgtagagatc gctgacctcg taggcggcct
      781 tggccgggtc gaggacctgg aagaagacga ccccgtcgac cgcgaccatc gcattgtcct
      841 tggtgatgat ctcctgcccg gggatgtcga ggacctgctc catcatgttg atgcggcggc
      901 cgactcggta gaagaatggc gggacgaagt tgaagccggg ctggccgacc cgaacgaagc
      961 ggccgaaatg ctcgattgtg tagcgatagc cctgatgtac gatcttgacg ctcgccatca
     1021 cgaacagcag cgcaagcact gcgaccgcgg tcattaaggt agtcagcatc gatagtcccc
     1081 gcttgtgtct cgaagcccat gatgctgctt accggctagg aacggaaggg aaatcgaggt
     1141 gaacgtcagc ctggagcatg tccggtcggt actattcctg ccggcgtcga acccgcgggc
     1201 gatcgtccat gcgcgcgagt cagcgtccga tctcgtcatc ctcgacctcg aagatgcggt
     1261 gaagagcgag gacaaggaca atgcccgatc cgcggctgtc gatgcggtcg cggacgactg
     1321 gccgatgcag gtcgcgatcc gagtgaatgc catcggaacc gactggcact cgctcgacgt
     1381 cgattccgtc gctcgctcga acgcagcgtt cgcggtgctc cctcgggcat cctcggcacg
     1441 gctcgtccac gaagtcgccg aggcgctttc caagccggtg ctggcgatgg tcgagaccgc
     1501 agcgggcgta ctcgcggcag cggaaatcgc caaggaatcc gcagcgctgg ttgccgggac
     1561 caacgatttg tccgccgatc tcagattgcc tgccggaagc ggtcgagcgc cgcttcagac
     1621 tgcgctccag acgatcgttc tcgcggctcg cgccgccggc atcgccgtat tcgacggagt
     1681 gttcaacgac ctcgaggaca gcgagggttt cgctgcccaa tgcgccgaag gccgccgctt
     1741 cggattcgac ggcaagagcc tcattcatcc aaagcagatc gagccgtgca accgcgcttt
     1801 ctcgccgagc gtgtcggagc tcgaacgcgc gcgccggctg gtcgaggcgt tcggaggggg
     1861 cgcacagcgc ttcgaaggcg agatgatcga aaggatgcac gtcgacgccg ctcgccggct
     1921 tctggaccgg gcgtgagccg aatcgtcgat ggttcgctga ggatcgtcct cacgggcatg
     1981 cacgccgtgc ttcgagccgc ctggttcgtg cggcggccga agacattcgg ggcgcacgcg
     2041 ctcgcgctga cgcctgaaaa caagatcgtg ctggtaaagc tccgctacgc accgggatgg
     2101 cgggtgccgg gaggcggcag gagcgaagac gaagaccccg tcgaagcagc gcttcgcgag
     2161 ctgcgcgagg aaatcggcct cgtctctcac ggcgacgcca gccttgcccg cgatttcgac
     2221 gatctgaccg gtttcaagcg cgataccgcc tcgctcgtcg tcgtccgcga tgtcctctac
     2281 cggccgcacc gctggagctg ggaagtcgaa cgggtctgcg aagccgaact cgattcgctg
     2341 cccagcgaca tgtccgaaat cacggtgcgg tggatcgaag ggcttcgcgc cctgctgtag
     2401 gcgaatctgg ccgcggggaa accgaagcgg cggccaagcg ctatttgccc atggctgttt
     2461 caggcgagcg atggtggacc gttcagcatg gaccggggcc ggtcgtcgcg accgcgatcc
     2521 ataatggtca cgaccttggg tccgagactg cttcgaggat tgcgatttcc gattccgagc
     2581 ggcttcggga agaggacccc ttcaccggcg aggccgttct cgacgtgccg gcgcatgtca
     2641 tcgtgcatcg gtcccgtttc gagttcgacc tcaaccgacc gcccgaagga gcgctttacc
     2701 tgaccctgga gcagtcgtgg ggcctggagg tgtggaagac gcagcccgaa gcggacttcg
     2761 tccaacgttc gctcgacgtc cactcaggct acttccggat gctcgagcag cttctcgacg
     2821 gtatcgcccg ccgccatgag cggttcgtcc tgattgacgt ccacagttac aatcaccggc
     2881 gccagggtcc tgattccccc gcagctccgg tagaggaagc gccggacatc aacatcggca
     2941 ccttttcgat gccgcgcgac cattgggcat tcctgatcga cccgctgatc gaagcgcttc
     3001 gcggctttga tttcaacggc cgacggctcg acgtgcgtga aaatgtcgcc ttcgagggca
     3061 gggggtacca gacg
//
LOCUS       DATAKH010000192         2487 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32812,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000192 DATAKH010000000
VERSION     DATAKH010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32812"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VHN55_07965"
     CDS             complement(<1..266)
                     /locus_tag="VHN55_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010402863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HEX2803898.1"
                     /translation="MTIEVGQKIPDVPLAIATGDGPQPTTSGEFFKGKKVALFAVPGA
                     FTPTCSARHLPSYVDKAGELKAKGVDEIACISVNDPFVMAAWGE"
     gene            379..951
                     /locus_tag="VHN55_07970"
     CDS             379..951
                     /locus_tag="VHN55_07970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010217366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEX2803899.1"
                     /translation="MESPPFLSGKLLLAMPGMSDPRFERAVIAICVHDENGAVGIGIG
                     HKRAGLRFRTLLKQLEIDPGEAPDCAVHHGGPVEPGRGFVLHSMDWGGQDTLQVSGPG
                     GKLFSMTGTIDVLRAIAEGRGPTQWIVSLGYAGWEEGQLDSEMTRHGWFAAEGSGDIL
                     FDTPTDERWAAAFKASGVDPRLLSSETGAA"
     gene            948..1481
                     /locus_tag="VHN55_07975"
     CDS             948..1481
                     /locus_tag="VHN55_07975"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020819647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2803900.1"
                     /translation="MSAAQVRDVAAGDAEAIALIYGHHVLHGTASYEVEPPSTEDILA
                     KIVRITGRGWPFLVASAEGKIAGYAYAEQLRDRAAYRFTCENSIYVHPDRLGQGIGKR
                     LLIELCRRAEQHGFRQMIAVIGGGETASVALHQSCGFDVVGRLRSVGWKKGRWLDTVY
                     MQRGLGAGAGEPGGSDI"
     gene            1560..>2487
                     /locus_tag="VHN55_07980"
     CDS             1560..>2487
                     /locus_tag="VHN55_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX2803901.1"
                     /translation="MATQAETRFTDYVVKDISLAGFGRKEIEIAETEMPGLMALRDEY
                     GDSKPLTGARITGSLHMTIQTAVLIETLIALGAEVRWASCNIFSTQDHAAAAIAAGGT
                     PVFAVKGETLEEYWEYVTRIFDWGQDTTANMILDDGGDATMFALWGARVEAGEKLFEP
                     SNEEEEVFVSTLNRFLEDRPGYLTKSVETIKGVSEETTTGVHRLYDLSKQGKLPFPAI
                     NVNDSVTKSKFDNLYGCRESLVDGIRRGTDVMMSGKVAMVAGFGDVGKGSAASLRQAG
                     CRVMVSEVDPICALQAAMEGYEVVTMEDAAPRA"
BASE COUNT          439 a          759 c          858 g          431 t
ORIGIN      
        1 ttctcgcccc aggcggccat gacgaagggg tcgttgaccg agatgcaggc gatttcgtcg
       61 actcccttcg ccttcagctc cccggccttg tcgacgtagg agggaaggtg ccgggcggaa
      121 caggttggag taaaggcacc tggaaccgcg aacagcgcca ccttcttgcc cttgaagaat
      181 tcgccgctgg tggtcggctg cggtccgtct ccggttgcga tggcgagcgg gacgtcgggg
      241 atcttctgtc cgacttcgat ggtcattggg gcttctcctt atgggccgtt gagaaggcga
      301 gataggccgc acggatggcg ctctcaaggg ccgcaatcgg ccttgccgct cttgcctctc
      361 cgtcccatca tggaggccat ggagagtccg cccttcctgt ccggcaagct gctcttggcg
      421 atgcccggca tgtccgatcc tcgattcgag cgggcggtga tcgcaatttg cgtgcacgac
      481 gagaacgggg ccgtcggaat cggaatcggc cataagcgcg ccggccttcg attccgcacc
      541 ctcctcaagc agctggagat cgatcctggc gaagcgcccg actgcgcggt ccaccacggc
      601 ggcccggtcg agccgggccg gggcttcgtc ctccactcga tggactgggg cgggcaggac
      661 acgcttcagg tcagcggacc gggcggaaag ctgttctcca tgaccggcac catcgatgtg
      721 ctgcgagcaa tcgcggaggg acgcggaccg acgcaatgga tcgtgtcgct tggctatgca
      781 ggctgggaag agggccagct ggatagcgag atgacccgcc acggctggtt cgccgcggag
      841 ggcagcggcg acatcctgtt cgacacgccc accgacgagc ggtgggcggc ggcattcaag
      901 gcgtcgggag tcgacccgcg gctgctgtcc agcgagaccg gggccgcttg agcgccgcgc
      961 aggtccgcga cgtggcagcc ggcgacgcgg aagcgatcgc cttgatctac gggcatcatg
     1021 tgcttcacgg gaccgcgtcg tacgaggtcg agccgccctc gaccgaggac atcctcgcaa
     1081 agatcgtccg gatcaccggc cggggctggc cgttcctggt tgccagcgcc gaggggaaaa
     1141 tcgccggcta tgcctatgcg gagcagcttc gggaccgcgc cgcctatcgc ttcacctgcg
     1201 agaacagcat ctacgtgcat cccgaccggc tcgggcaagg gatcggcaag cgattgctga
     1261 tcgagctgtg ccgccgggcc gagcagcacg gtttccggca gatgatcgcc gtcatcggcg
     1321 gcggggagac ggcatcggtg gcgcttcatc aaagctgcgg cttcgatgtt gtcggccggc
     1381 tgcggtcggt gggctggaaa aagggccgct ggctcgacac ggtttatatg cagcgggggc
     1441 ttggagcagg cgccggcgaa ccaggcggca gcgacatata aagaattctt tatatttgcg
     1501 ttgagcagct tcgggggcta gggcgcggcg caaccaacca catatccgga gactgtttcg
     1561 tggcgaccca ggctgagacc cgtttcaccg actatgtcgt gaaggacatt tcgctcgccg
     1621 gtttcggccg caaggaaatc gagatcgccg agacggagat gccgggcctg atggcgctcc
     1681 gcgatgaata tggcgactcg aagccgctga cgggtgcgcg gatcaccggg tcgcttcaca
     1741 tgacgatcca gaccgcggtg ctgatcgaga cgctgattgc gctcggcgcg gaggtgcgtt
     1801 gggccagctg caacatcttt tccacccagg accatgcggc agccgcgatc gcggccggcg
     1861 gaacgccggt gttcgcggtc aagggcgaga cgctcgagga atattgggaa tatgtgaccc
     1921 gcatcttcga ttggggccag gacacaaccg ctaacatgat cctcgacgac ggcggcgatg
     1981 cgacgatgtt cgcgctgtgg ggcgcaaggg tcgaggccgg cgagaagctg ttcgagcctt
     2041 ccaacgagga agaagaggtc ttcgtctcga ccttgaaccg cttcctcgag gaccgtccgg
     2101 gttatctcac gaagagcgtc gagaccatca agggcgtgtc ggaagagacc accacgggcg
     2161 tccaccggct ttacgacctg tccaagcagg gcaagctccc gttcccggcg atcaacgtca
     2221 acgacagcgt caccaagtcg aagttcgaca acctctatgg ctgccgtgaa tcgctggtcg
     2281 acggcatccg ccgcggcacc gacgtgatga tgtccggcaa ggtcgcgatg gtcgcgggct
     2341 tcggcgacgt cggcaagggc tcggccgcct cgctgcgcca ggccggctgc cgcgtcatgg
     2401 tctccgaggt cgatccgatt tgcgcgctgc aggcagcgat ggaaggctat gaagtcgtaa
     2461 ccatggaaga cgccgcgccg cgggccg
//
LOCUS       DATAKH010000193         3643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_19212,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000193 DATAKH010000000
VERSION     DATAKH010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19212"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VHN55_07985"
     CDS             complement(<1..590)
                     /locus_tag="VHN55_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004207289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX2803902.1"
                     /translation="MTGTDKPLDGRLALVTGASRGIGAATAEALAGAGAHVILVARTA
                     KALEQVEERIHEAGGSATIAPLDLTEGEAVGKLAAAIAERWQALDILVLNAAMLGSLT
                     PVEHIDAKEYARVLTLNVAANQALIAAFDRMLRRSERADLVAMTSSVGHEPRAFWGAY
                     GSSKAALENLVLTYGDETAHAGKIRVHVVDPGATRTR"
     gene            complement(631..2079)
                     /gene="purF"
                     /locus_tag="VHN55_07990"
     CDS             complement(631..2079)
                     /gene="purF"
                     /locus_tag="VHN55_07990"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEX2803903.1"
                     /translation="MLTTNPFDDDKLREECGVFGIWGADAAASFVALGLHALQHRGQE
                     AAGITSFDGAHFHSHRAVGQVAGNFDRDDVIARLPGRTSIGHVRYSTTGASALRNVQP
                     LFAELSDCGFAVAHNGNISNAMKLRRTLSLRGSIFQSTSDTEVIIHLVATSHQSTPLD
                     RLVDALKQVEGAYSLLVLTEEGLIACRDPLGIRPLVMGKLGEATIFASESVALDVIGA
                     TFIRDVEPGELIVVNGSGIRSFRPFEKARPRPCIFEHVYFSRPDSVVDGTSVYEVRKN
                     IGAELAREAPVEADIVVPVPDSGVPAALGFSQESAIPFELGIIRSHYVGRTFIQPSQE
                     VRNLGVKLKHNANSALIAGKRIVLIDDSIVRGTTSLKIVQMMRDAGAREVHMRIASPP
                     TKHSCFYGVDTPERAKLLAAQMSVEQMRDYINADSLAFISIDGLYRALGETRNGAEPQ
                     RCDACFTGDYPTSLTDAEEGGSVAGLSLVASR"
     gene            2211..>3643
                     /locus_tag="VHN55_07995"
     CDS             2211..>3643
                     /locus_tag="VHN55_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2803904.1"
                     /translation="MPTYSAPVKDTLYVLDDILQIQRYSNLPGFANATPDLVEAILEE
                     AGRFSAEVLQPLNKVGDEIGCKRNDDGSVTTPPGFKKAYDQFREGGWPTLTAPEEFGG
                     QGLPQVIGTAIGEYILSANHSFEMYQGLTSGAIAALMIKGTEEQKQTYIPKMVAGEWT
                     GTMNLTEPHCGTDLGLLKTRAEPNDDGSYSITGTKIFISSGEHDLADNIIHLVLAKRA
                     GAPDNVKGISLFVVPKFLVKEDGSLSDKNAVSCGALEKKMGIHGNATCVMNYDGARGW
                     LVGEPEKGLQAMFIMMNAARLGVGLQGLAQGEVAYQNAVQYARDRRQGRALNESDRDP
                     DAKADPLFVHPDVRRMLMQMRAWNEGARALVLWGSLQVDLMRRSQDEAERQQAEDLLG
                     LLTPVIKGYCTDKGFEAAVLAQQVFGGHGYIREHGVEQFVRDARIAQIYEGTNGIQAM
                     DLVGRKLPKDGGRAIRAFLALVGGEIA"
BASE COUNT          657 a         1145 c         1220 g          621 t
ORIGIN      
        1 cgggttcggg tcgctccagg gtcgacgaca tggacccgga tcttgccggc atgggcggtc
       61 tcatcgccgt aggtgaggac caaattctcg agcgcggcct tggacgagcc gtaggcgccc
      121 cagaaggcgc gaggctcgtg cccgacagac gaggtcatgg cgaccaggtc ggcccgttcg
      181 cttcgcctca gcattcggtc gaacgcggcg atcagcgcct ggttggcggc aacgttgagg
      241 gtcaggaccc gggcatattc cttggcgtcg atgtgctcaa cgggggtcag cgagccgagc
      301 atcgccgcgt tgaggacgag aatatcgagc gcttgccacc gctcggcgat ggccgccgcg
      361 agcttgccca ccgcctcgcc ctcggtgagg tcgagcggag cgatcgtcgc gcttccgccc
      421 gcttcgtgga ttcgctcctc gacctgctcc agcgccttgg cggtgcgggc aacgaggatc
      481 acatgcgctc ctgcaccggc cagcgcttcc gccgtggcgg cgccgattcc gcggctggcg
      541 ccggtgacca gcgcaagcct gccgtcgagc ggtttatcgg tgcctgtcat ggcggggcgc
      601 gtagcccgtc agagacgaag gggaaagctc ttagcggctc gcgaccagcg acagtccggc
      661 aaccgaaccg ccttcctcgg cgtcggtcag gctggtcggg taatcgccgg tgaagcaagc
      721 gtcgcagcgc tgcggctcgg ctccgttgcg ggtttcgcca agcgcccggt acagcccgtc
      781 gatggaaatg aaagcgaggc tgtcagcgtt gatgtaatcg cgcatttgct cgacgctcat
      841 ctgcgccgcc agcagcttcg ccctttccgg cgtgtcgact ccgtagaagc agctgtgctt
      901 ggtcggcggc gaggcgatgc gcatgtgcac ttccctggcg ccggcgtcac gcatcatctg
      961 cacgatctta aggctcgtcg tcccgcgaac gatcgaatcg tcgataagca cgattcgctt
     1021 gcccgcgatc agcgccgaat tggcattgtg cttgagcttg acgccaaggt tgcgaacctc
     1081 ctggctcggc tggatgaagg tccggccgac atagtgcgag cggatgatcc cgagctcgaa
     1141 gggaatggcc gattcctggc tgaacccgag cgccgcgggc actccgctgt cgggaaccgg
     1201 aaccacgata tccgcttcga ccggcgcttc gcgggcgagc tcggcgccga tgttcttgcg
     1261 cacctcgtag acagaggtcc cgtcgacgac cgaatcgggc cgcgagaaat agacatgctc
     1321 gaagatgcag gggcgcggcc tcgccttctc gaacggacgg aaggagcgga ttccgctgcc
     1381 gttgacgacg atcagctcgc ccggctcgac gtcgcggatg aaggttgcgc cgattacgtc
     1441 gagggcgacg ctctccgacg cgaagatcgt ggcttcgccg agcttgccca tcaccagcgg
     1501 gcggattccg aggggatcgc ggcaggcgat caagccttcc tcggtcagca ccagcagcga
     1561 gtaagcgcct tcgacctgct tgagcgcgtc gacgagacgg tcgagcggag tcgattggtg
     1621 tgatgtggcg acgaggtgga tgatgacttc ggtgtcgctg gtcgactgga agatcgaccc
     1681 gcgcaggctg agcgtgcgcc gaagcttcat cgcgttggag atgtttccgt tatgagcgac
     1741 cgcaaacccg cagtcgctaa gctcggcgaa gaggggctgg acgttgcgga gcgccgatgc
     1801 cccggtggtc gaatagcgca cgtggccaat cgatgtccga cccggaagcc gggcgatgac
     1861 gtcgtcccgg tcgaaattgc cggcaacctg gccgaccgcc cggtgcgaat ggaaatgggc
     1921 gccgtcgaag ctggtgattc cagccgcttc ctggcctcgg tgctggagcg cgtggaggcc
     1981 gagcgcgacg aagctcgccg ccgcgtcagc gccccaaatt ccgaacaccc cgcactcttc
     2041 gcgcagcttg tcgtcgtcga aaggatttgt cgtcagcatg tcccacccgt gctgctggcc
     2101 accccatata gggattgccc ggccctttgt cgcccccggc atgaaccggg cttgaaggaa
     2161 accgcgcact gttccagtct gcactccggt tgcagaagga aacttgacgc atgcccacct
     2221 acagcgcgcc ggtcaaagac acgctctacg tgctcgacga cattctccag atccagcgtt
     2281 attcgaacct gccgggcttc gccaatgcca cgcctgacct ggtggaggcg attctcgagg
     2341 aagcgggcag gttctcggcc gaggtgctgc agccattgaa caaggtcggc gacgagatcg
     2401 gctgcaagcg aaacgacgac ggctcggtga cgactccgcc cggtttcaag aaagcctacg
     2461 accagttccg cgagggcggc tggccgacct tgaccgctcc cgaagagttc ggcggccaag
     2521 ggcttccgca ggtgatcggc accgccatcg gcgaatatat cctgtccgcc aaccacagtt
     2581 tcgagatgta ccaggggctg acgtccggtg cgattgccgc gctgatgatc aagggcaccg
     2641 aagagcagaa gcagacttac atccccaaga tggtggccgg cgaatggacc ggcacgatga
     2701 acctgaccga gccgcattgc ggcaccgatc tcggcctcct gaagacgagg gcggagccca
     2761 acgacgacgg cagctattcg attaccggca ccaagatctt catctcgtcc ggcgagcacg
     2821 acctcgccga caacattatc cacctggtgc tcgccaagcg cgccggcgct ccggacaatg
     2881 tgaaaggtat ctcgctgttc gtcgttccga agttcctggt gaaagaggac gggtcgctta
     2941 gcgacaagaa tgccgtctcg tgcggagcct tggagaagaa gatgggcatc cacggcaatg
     3001 ccacctgcgt gatgaactat gacggcgcca ggggctggct ggtcggcgag ccggaaaagg
     3061 gtctccaggc aatgttcatc atgatgaacg ccgctcgcct cggggtcggc ctgcagggcc
     3121 tcgcccaagg cgaggtcgcc taccagaatg cggtacaata tgcccgcgac cggcggcagg
     3181 gcagggcgct caacgagagc gaccgcgatc ccgacgcgaa ggcggacccg cttttcgtcc
     3241 acccagacgt gcggcgaatg ctgatgcaga tgcgcgcctg gaacgaaggc gcccgggcgc
     3301 tggtgctgtg ggggtcgctc caggtcgatc tgatgcgccg ctcgcaggac gaggcggaac
     3361 gccagcaggc cgaggacctg cttggccttc tgacgccggt catcaagggc tattgcaccg
     3421 acaagggctt cgaggccgcg gtgctggcgc agcaagtgtt cggaggccac ggctatatcc
     3481 gcgagcatgg agtggagcag ttcgttcgcg atgcccggat cgcgcagatc tacgaaggca
     3541 ccaacgggat ccaggcgatg gacctggtcg gccggaagct cccgaaggac ggcggccgag
     3601 ccatccgcgc tttccttgcg ctggtcggcg gcgagatcgc cga
//
LOCUS       DATAKH010000194        12130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_19251,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000194 DATAKH010000000
VERSION     DATAKH010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 12130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12130
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19251"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VHN55_08000"
     CDS             <1..185
                     /locus_tag="VHN55_08000"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010162904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEX2803905.1"
                     /translation="SDDQVAALKAKLKARAARDVTIDASTDPNLLGGLIVRIGSQMID
                     ASLKTKLNRLAQAMKG"
     gene            196..1725
                     /gene="atpA"
                     /locus_tag="VHN55_08005"
     CDS             196..1725
                     /gene="atpA"
                     /locus_tag="VHN55_08005"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX2803906.1"
                     /translation="MDIRAAEISRVIRDQIANFAADEEVAEVGTVLSVGDGIARIYGL
                     DNVQAGEMVEFEDGTKGMALNLEADNVGVVIFGSDEGIREGSSAKRTGTIVDVPIGKG
                     LLGRVVDALGNPIDGKGPIEFTERRRVEVKAPGIIPRKSVHEPVQTGLKALDALVPIG
                     RGQRELIIGDRQTGKTAVAMDAFINQKTINASGDESQKLYCIYVAIGQKRSTVAQIVR
                     QLEENGAMDYTIVVAATASEPAPLQFLAPYAGCAMGEYFRDNGMHAVIVYDDLSKQAV
                     AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDDNGGGSLTALPIIETQAGDV
                     SAYIPTNVISITDGQIFLETDLFYQGIRPAINVGLSVSRVGSAAQTKAMKKVAGSIKL
                     ELAQYREMAAFAQFGSDLDAATQRLLARGARLTELLKQPQFSPMPVEEQVASIYAGTK
                     GFIDKIETSAVTRYEAAMLSYLRSEHPKILKTIRDTKQLDDDTAAKLNDALTEFGKTF
                     A"
     gene            1727..2611
                     /locus_tag="VHN55_08010"
     CDS             1727..2611
                     /locus_tag="VHN55_08010"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEX2803907.1"
                     /translation="MASLKALKLRIGSVKSTQKITKALNMVAASKLRRAQQNATAGRP
                     YSERMRDVVESIASRVTVGPQSPKLLAGTGKDDTHLIVVCTSDRGLAGAFNSNIVRAA
                     RRKAEALIKDGKTVHFFIVGRKGRPVLQRLYPKAIVGQHDTTAMKNPSYEVASAIADD
                     IVDRFESGNFDVAHLAYANFRSTLVQEPTVDQIIPIPSGGGSQEKGAGANSMVEYEPD
                     EEEILSALLPRNIAVQVYRALLENQAGFYGSQMTAMDNATRNAGDMINRLTIQYNRTR
                     QAAITTELVEIISGAEAL"
     gene            2639..4153
                     /gene="atpD"
                     /locus_tag="VHN55_08015"
     CDS             2639..4153
                     /gene="atpD"
                     /locus_tag="VHN55_08015"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010183601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEX2803908.1"
                     /translation="MATAAPAKPRTKKAAPAADKPKAPVQTHNLTGKVAQVIGAVVDV
                     SFEGELPPILGALETDNHGNRLVLEVAQHLGENIVRTIAMDATDGLTRGQDVRSTGSQ
                     IEVPVGPKTLGRIMNVVGEPIDERGPIGSDMTAPIHADAPAFVDQSTEASILVTGIKV
                     IDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLY
                     HEFLDAGVIAKDKDGNPTPEGSKVALVFGQMNEPPGARARVALSGLAQAEYFRDVEGQ
                     DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTLQERITSTNKGSITSV
                     QAIYVPADDLTDPAPATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRVLTPAVVGQ
                     EHYETARAVQETLQRYKSLQDIIAILGMDELSEEDRLVVGRARKIQRFLSQPFHVAEV
                     FTGIPGKFVQVEDTVRSFKAVVNGEYDHLPESAFYMVGGIDEAVAKAEKMASEA"
     gene            4153..4416
                     /locus_tag="VHN55_08020"
     CDS             4153..4416
                     /locus_tag="VHN55_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007164761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HEX2803909.1"
                     /translation="MADLHFELVTPEKLVMSDDVHMVVVPGTEGNSGIMAGHAPFMTV
                     LKDGDDIAVYRTAGGEPERIPVSGGFAEVGANGLIILAEKAGE"
     gene            4522..6045
                     /locus_tag="VHN55_08025"
     CDS             4522..6045
                     /locus_tag="VHN55_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX2803910.1"
                     /translation="MNAFGKRGSLAGGQRPTFGVAKPMKGGPGKASSAPEGGEQFPPI
                     EELEAEADADAPAAPGAPAGAAMDRLTARQNASGEQGSSKSEGFEASVHKIKEQVLPR
                     LLERVDPEAAATLSKDELAEEFRPIIGEVLAELKITLNRREQFALEKVLVDELLGLGP
                     LEELLSDPNVSDIMVNGPEQTFVERKGKLELAQVQFRDEEHLFQIAQRIVNKVGRRVD
                     QTTPLADARLQDGSRVNVIIPPLSLRGTAISIRKFSEKPITIDMMRGFGSMSEKMGTV
                     LKIAGASRMNVVISGGTGSGKTTMLNALSKMIDPGERVITIEDAAELRLQQPHWLPLE
                     TRPANLEGQGAITIRDLVINALRMRPDRIILGEIRGSECFDLLAAMNTGHDGSMATLH
                     SNSPRECLARMENMVMMSDIKIPKEAISRQIADSVDLIVQVKRLRDGSRRTTNITEVI
                     GMEGDVIVTQELFKFEYLDESADGKIIGEYRSMGLRPYTLEKAKQFGFDQPYLEACL"
     gene            complement(6068..6844)
                     /locus_tag="VHN55_08030"
     CDS             complement(6068..6844)
                     /locus_tag="VHN55_08030"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEX2803911.1"
                     /translation="MRKSFIIFVLAGAVAVPGLASAQQAPTASIAEMAATPLVRVNIA
                     ETLRTPPDEATMTVGTQSKAATATAAVAANKTKTEKLLAAIRAAGIRERDIQTQGIQL
                     QPDYRWDREPNGQGRQTLIGYVASNSVQIKTRNIDTLTSLLDALTTAGADSVYGPTFG
                     ISDPEPLRREARVRAMARGKAEATEFARNNGYTSVRLLSVEEGTSYRGTEVMVTAARV
                     ANVSAPPPPPPPAPERDGGVVAPGQLETGVSLNLLYRMEH"
     gene            complement(6944..7327)
                     /gene="crcB"
                     /locus_tag="VHN55_08035"
     CDS             complement(6944..7327)
                     /gene="crcB"
                     /locus_tag="VHN55_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017666878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEX2803912.1"
                     /translation="MLYLIAFIGAGIGGALRHGVNVWAARLLGYGFPFGTLIVNIAGS
                     LAIGLLAGYFGWRTGTSQHLRFFLVTGILGGFTTFSAFSLETALLVERHNYGLAAAYV
                     LASVAVSIAAVFVGLALFRTTGQLP"
     regulatory      complement(7353..7415)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
     gene            complement(7473..7955)
                     /locus_tag="VHN55_08040"
     CDS             complement(7473..7955)
                     /locus_tag="VHN55_08040"
                     /inference="COORDINATES: protein motif:HMM:NF021536.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2267 domain-containing protein"
                     /protein_id="HEX2803913.1"
                     /translation="MSANGVDVFDKTLETTHIWLNEICEDLGPDKQVAWKVLSTVLHK
                     LRDRLTVNLAAHLGAQLPLLVRGVYYDQFEPAKLPTGCNSREEFVAEVAEWLSDTRPV
                     DPDLAVRSVFRVLSNHVSEGQIAKVREALPKSLRQSWMDAERRGAESTLTLDEPVGTA
                     "
     gene            8125..9438
                     /gene="hemN"
                     /locus_tag="VHN55_08045"
     CDS             8125..9438
                     /gene="hemN"
                     /locus_tag="VHN55_08045"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEX2803914.1"
                     /translation="MIAPQTFARYAAMRVPRYTSYPTAPNFWPAIGDSDYRAWLRSVE
                     TGSTVSVYLHIPFCRQMCWYCGCHTSVTHRQSPVSRYVETLLAEIALVESELRPGLRL
                     GHVHWGGGSPTLLEPEDVGKIHSALAPAFVFDPLAENAVEVDPRTLTEELAAAFAEAG
                     VNRASLGVQSFDPVVQAAINRVQSFETTAAAARMLRNSGIAALNFDLIYGLPHESVQS
                     CLDTIEQALTLRPDRVAVFGYAHVPSFKPHQKKIEAAALPDARERQRQALAMAEALTA
                     AGYRQIGLDHFALPGDSLAVAAERRQLRRNFQGYTADPCSTLIGFGASAIGRMPQGFV
                     QNATRIPDYEKRIASGQLAVVRDCRLASDDNERAAIIEQLMCNYRAHIGSVEAPLDQL
                     ERDGLIRRLGDLVEVTEDARPLVRAVAAAFDSYLPTSAATHVAAV"
     gene            complement(9442..11646)
                     /locus_tag="VHN55_08050"
     CDS             complement(9442..11646)
                     /locus_tag="VHN55_08050"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HEX2803915.1"
                     /translation="MFFDVALAEEIWTAKYRFQTSEGQGDDSFAATAERVARAVAEAE
                     SPASRALWEQRFREAIADFRFIPAGRVLAGAGTDRAVTLFNCFVMGTIPDSLDGIFEH
                     LKQAALTMQQGGGVGMDFSTIRPSGTLVRGVAADASGPLSFMDCWDSMCRTVHSAGQR
                     RGAMMGCLRIDHPDIEAFIDAKRDPARFRNFNLSVLVTDAFMTALGSDSEWPLVFNGA
                     TMRTVRARELWDKLMRATYDVAEPGVIFVDRANAQNNLGYCETISASNPCGEQMLPPY
                     GACLLGSINLARLVDRPFEEGARIDEEQLGELTRTAVRMLDNVIDISRYPLPEQEAEA
                     KAKRRIGLGITGLADALLFCGAAYGRSEAVALTRSWLNTIKREAYRASALLAGEKAPF
                     PLYDKVILDQPNLTSLDDETRALIAEHGLRNGCLTSIAPTGTTSLLAGNVSSGIEPVF
                     AYSYTRKIRQPDGTTREEKVEDYAMRLWREVKGDAPPPPELFVSAQTLSPSDHLTMQA
                     TAQALIDSSISKTVNCPEDISFEDFADIYVEGYHLGCKGLTTYRPNAVTGSVLSVGEA
                     KPKPEPETLAPREEQLHGSTYKLKWPESPHAVYVTINDVEHDGQRRPFEMFINSKNME
                     HYAWTLGLTRMVSAVFRRSGDVAFVAEELKAVFDPRGGAWMQGRYVPSLLAAIGDIVE
                     RHLGGLQAPVPAAAFETPRARPMPSCPQCGASALVKVEGCNNCLECGYSKCG"
     gene            complement(11819..11893)
                     /locus_tag="VHN55_08055"
     tRNA            complement(11819..11893)
                     /locus_tag="VHN55_08055"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11859..11861),aa:Val,seq:gac)
     gene            complement(12005..>12130)
                     /locus_tag="VHN55_08060"
     CDS             complement(12005..>12130)
                     /locus_tag="VHN55_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2803916.1"
                     /translation="VALQSGRAAPEAKMLSKPFHLKDLVAEVDRIFQTEDQHGRL"
BASE COUNT         2277 a         4026 c         3804 g         2023 t
ORIGIN      
        1 tgagcgacga ccaggtcgcg gccctgaagg cgaagctgaa ggcccgcgcc gcgcgggacg
       61 tcactatcga cgcgagcact gaccccaatc tcctcggagg gctgatcgtc aggatcggaa
      121 gccagatgat cgacgcttcg ctcaagacaa aactcaacag actcgcccag gcgatgaaag
      181 gctaaaggct aagcaatgga catccgagcc gctgaaattt cccgcgtcat ccgcgatcag
      241 atcgcgaatt tcgctgccga cgaagaggtt gccgaggtcg gcaccgtcct ttccgtcggc
      301 gacggaatcg cgcgcatcta cggcctcgac aacgtccagg ccggcgagat ggtcgagttc
      361 gaggacggga cgaagggcat ggcgctcaac ctcgaggccg acaatgtcgg cgtcgtcatc
      421 ttcggttccg acgagggaat ccgcgaagga tcaagcgcca agcgcaccgg caccatcgtc
      481 gacgttccaa tcggcaaagg ccttctcggc cgcgtcgtcg acgcgctcgg caacccgatc
      541 gacggcaaag ggccgatcga attcaccgag cgccgccggg tcgaggtcaa ggcgccgggg
      601 atcattccgc gcaagtctgt ccatgagccg gtccagaccg gtctcaaggc gctcgacgcg
      661 ctggtcccga tcggccgcgg ccagcgcgag ctgatcatcg gcgaccgcca gaccggcaag
      721 accgccgtgg cgatggacgc tttcatcaac cagaagacca tcaacgccag cggcgacgag
      781 agccagaagc tctactgcat ctatgtcgcg atcgggcaga agcggtcgac cgtcgcccag
      841 atcgtccgcc agctcgaaga gaatggcgcg atggactaca ctatcgtcgt cgccgccacc
      901 gcttcggagc cggcgccgct gcagttcctc gcgccttatg ccggctgcgc gatgggcgaa
      961 tatttccgcg acaacggcat gcacgcggtc atcgtctacg acgatctgtc gaagcaggcc
     1021 gtcgcctacc gccagatgtc gctccttctt cgccgcccgc ccggccgcga agcctatccg
     1081 ggcgacgtct tctaccttca cagccgcctt cttgagcgcg ccgcgaagat gaacgacgac
     1141 aatggcggcg ggtcgttgac cgcgcttccg atcatcgaaa cgcaggccgg cgacgtgtcg
     1201 gcctacattc cgaccaacgt gatttcgatc accgacggcc agatcttcct cgagaccgac
     1261 ctcttctacc agggcatccg cccggcgatt aacgtcggcc tgtcggtcag ccgcgtcggc
     1321 tcggccgcgc agaccaaggc gatgaagaag gtggccgggt cgatcaagct ggagctcgcc
     1381 cagtatcgcg aaatggccgc tttcgcccag ttcggctccg acctcgacgc cgccacccag
     1441 cgtcttctcg cccgcggcgc gcggctgacc gagctgctca agcagccgca gttcagcccg
     1501 atgccggtcg aagagcaggt cgcgtcgatc tacgccggaa ccaagggctt catcgacaag
     1561 atcgagacga gcgccgtcac tcgctacgag gcggcgatgc tgagctattt gcgctcggag
     1621 caccccaaga tcctcaagac catccgcgac accaagcaac tcgacgacga cactgccgct
     1681 aagctcaacg acgccctcac cgaattcggg aagacgttcg cataagatgg cttcgctaaa
     1741 ggccctcaag ctccgcatcg gctcggtgaa gtcgacgcag aagatcacca aggcgctcaa
     1801 catggttgcg gcgtcgaagc ttcgccgcgc ccaacagaac gccaccgcag gccgccccta
     1861 ttcggagcgg atgcgcgacg tagtggagtc gatcgcgagc cgggtcacag tcggtccgca
     1921 gagcccgaag ctgcttgccg gcaccggcaa ggacgacacc cacctgatcg tcgtctgcac
     1981 cagcgaccgc ggcctcgccg gagccttcaa cagcaacatt gttcgcgccg cgcgccgcaa
     2041 ggccgaagcg ctgatcaagg acggcaagac ggtccatttc ttcatcgtcg gccgcaaggg
     2101 ccgaccggtg ctccagcgcc tctatccgaa ggcgattgtc ggccagcacg acaccaccgc
     2161 gatgaagaac ccgagctacg aggtcgcttc ggcaatcgct gacgatatcg tcgatcgctt
     2221 cgaaagcggc aatttcgacg tcgcccacct cgcatatgcg aacttccgct cgaccctggt
     2281 ccaggagcca acggtggacc agatcatccc catcccgagc ggcggcggta gtcaggaaaa
     2341 aggcgcaggc gccaattcga tggtggaata tgagcccgac gaggaagaaa tcctgtccgc
     2401 gctcctgccc cgcaacatcg cagtgcaggt ctaccgcgcg ctgctcgaga accaggccgg
     2461 cttctacggc tcgcagatga ccgcgatgga caatgcgacc cgcaatgccg gcgacatgat
     2521 caaccgcctg acgatccagt acaaccggac ccgccaggcc gcgatcacga ccgagctggt
     2581 cgagatcatt tccggcgccg aagcgcttta agaattcttg caagaggacg actgaccgat
     2641 ggccactgcc gcccccgcaa agccccgcac gaagaaagcc gcgccggcgg ccgacaagcc
     2701 caaggcgccc gtgcagacgc ataacctcac cggcaaggtc gcgcaggtga tcggcgccgt
     2761 cgtcgacgtg tcgttcgaag gcgagcttcc gccgatcctc ggcgcgcttg agaccgacaa
     2821 ccacggcaac cgcctggtcc tggaagtcgc ccagcatctc ggcgagaaca tcgtccggac
     2881 aatcgcgatg gacgcgaccg acggcctcac ccgcggccag gacgtccgct ccaccggttc
     2941 gcagatcgag gttcccgtcg gaccgaagac cctcggccgg atcatgaacg tggtcggcga
     3001 accgatcgac gagcgcggcc ccatcggcag cgacatgacc gcgccgatcc atgccgacgc
     3061 tccggcattc gtcgaccagt cgaccgaagc gtcgatcctg gtcaccggga tcaaggtcat
     3121 cgacctgctc gcgccttatg cgaagggcgg caagatcggc ctgttcggcg gcgccggcgt
     3181 cggcaagacc gtgctgattc aggagctgat caacaacatc gccaagggtc acggcggagt
     3241 ctcggtgttc gccggggtcg gtgagcgcac ccgcgagggc aacgacctct accatgagtt
     3301 cctcgatgcc ggcgtcatcg ccaaggacaa ggacggcaac ccgactccgg aaggctccaa
     3361 ggtcgcgctc gtgttcggcc agatgaacga gccgccggga gcacgtgcac gcgtagccct
     3421 ctccggcctg gcgcaagcgg aatatttccg cgacgtcgaa ggccaggacg ttctgttctt
     3481 cgtcgacaac atcttccgct tcacccaggc gggttccgaa gtgtcggcgc ttctcggccg
     3541 aattccgtcg gcggtgggct atcagccgac cctggccaca gacatgggca ccctgcagga
     3601 gcggatcacg tcgaccaaca agggctcgat tacctcggtc caggcgatct acgtccccgc
     3661 cgacgacttg accgatccgg cgcccgcgac gtcgttcgcc cacctcgacg cgacgacgac
     3721 gcttagccgc gccatttcgg agctcggcat ctacccggcc gtcgatccgc tcgactccac
     3781 cagccgagtc ctcaccccgg cggtcgtcgg gcaggagcat tacgagaccg cgcgtgccgt
     3841 ccaggaaacg cttcagcgct acaagagcct gcaggacatc atcgccatcc tcggcatgga
     3901 cgagctaagc gaggaagacc ggctggtcgt cgggcgcgcc cgcaagatcc agcgcttcct
     3961 gtcgcagcct ttccacgtcg ccgaggtgtt caccggaatc cccggcaagt tcgtccaggt
     4021 cgaagacacc gtccgctcgt tcaaggccgt cgtgaacggc gaatacgacc atcttcccga
     4081 gagcgctttc tacatggtcg gcggaatcga cgaagcggtt gccaaggccg agaagatggc
     4141 gtcggaggcc tgatggcgga ccttcacttc gagctcgtca cgccggaaaa gctggtgatg
     4201 tcggacgacg tccacatggt cgtcgtcccg ggcaccgagg gcaactcggg catcatggcc
     4261 ggccacgcgc cgttcatgac cgtgctgaag gatggtgacg acatcgcggt ctatcgcact
     4321 gccgggggcg agccggagcg aatcccggtc agcggtggct tcgccgaggt cggcgcgaac
     4381 gggctcatca tcctcgcaga aaaggcgggc gagtgatcga gtcccgttgc gggacagttt
     4441 tctaaacgcg gttagctttt cctaaaacat tccgccctat cccggtccgt ggtttttccg
     4501 cggatttgag tcggggtggt aatgaacgca ttcggcaagc gaggcagttt ggccggcggc
     4561 cagcggccga ccttcggtgt cgccaagccg atgaaaggcg gcccgggcaa ggcttcgtcc
     4621 gcgcccgagg gcggcgagca atttccgccc atcgaggagc tcgaggctga ggctgacgcc
     4681 gacgcgcccg ccgcgcccgg cgcgcccgcc ggcgccgcga tggatcgcct gacggctcgc
     4741 cagaatgcga gcggcgaaca gggcagcagc aagtccgaag gcttcgaagc ttcggtccac
     4801 aagatcaagg aacaggtcct cccccgcctc ctggagcggg tcgacccaga ggccgcggcg
     4861 accctcagca aggacgagtt ggccgaggaa ttccggccga tcatcggcga ggtgcttgcc
     4921 gagctgaaga tcacgctcaa ccgccgcgag cagttcgcgc tggaaaaggt gctggtcgac
     4981 gagcttctcg gtctcggacc gctggaagag ctgctgtccg acccgaacgt ctccgacatc
     5041 atggtcaacg gtcccgagca gaccttcgtc gaacgcaagg gcaagctcga gctggcccag
     5101 gtccagttcc gcgacgagga gcatctgttc cagatcgccc agcgcatcgt gaacaaggtc
     5161 ggccgccgcg tcgaccagac gacgccgctg gccgacgccc gccttcagga cggaagccgc
     5221 gtcaacgtta tcatcccgcc gctgtcgctt cgcggcaccg ccatctcgat ccgtaaattt
     5281 tccgagaagc cgatcaccat cgacatgatg cgcggtttcg gctcgatgtc ggagaaaatg
     5341 ggcaccgtgc tcaagatcgc gggcgcgagc cggatgaacg tggtcatctc gggcggcacc
     5401 ggctcgggta agacgacgat gctcaacgcc ttgtcgaaga tgatcgaccc gggcgagcgc
     5461 gtgatcacga tcgaggacgc ggccgagctt cggctccagc agccgcactg gctcccgctc
     5521 gaaacgcggc ccgccaacct cgaaggccag ggcgcgatca ccatccgtga cctggtcatc
     5581 aacgcccttc gtatgcgtcc cgaccgcatc atcctcggcg aaatccgcgg aagcgaatgc
     5641 ttcgacctcc tcgccgcgat gaacaccggt cacgacggct cgatggccac gctccactcc
     5701 aactccccgc gcgaatgcct cgcgcgtatg gagaacatgg tgatgatgag cgacatcaag
     5761 atcccgaagg aggcgatcag ccgccaaatc gcggattcgg tcgacctcat cgtccaggtg
     5821 aagcgcctcc gcgacggctc acgccgcacc accaacatca ccgaggtgat cgggatggag
     5881 ggcgacgtca tcgtcaccca ggagcttttc aagtttgagt atctggacga gagcgccgac
     5941 gggaagatca tcggcgaata tcgctcgatg gggcttcgcc cctacacgct ggagaaagcc
     6001 aagcagttcg gcttcgacca gccctacctg gaggcgtgcc tctagggcag ctggccgcca
     6061 gccgcggcta atgttccatt cggtaaagca ggttcagcga gacccctgtc tcgagctgtc
     6121 ccggtgcgac cactccgccg tcgcgctcgg gtgccggcgg cgggggtggc ggaggcgccg
     6181 acacgttggc tactcgagcg gccgtcacca tcacctccgt cccgcgatag gatgtgcctt
     6241 cctctacgga gagcagccgg acgctggtgt agccgttgtt gcgtgcaaat tcggtcgctt
     6301 ccgccttgcc tcgcgccatg gcgcggacgc gggcctcgcg gcgaagcggc tccggatcgg
     6361 agatcccgaa ggtcggtccg taaacgctat ccgcgccggc cgtcgtcaat gcgtcgagca
     6421 gcgaagtcaa agtgtcgatg ttgcgcgtct tgatttgcac cgaattgctg gcgacgtaac
     6481 cgatcagggt ctgccggccc tgcccgttcg gctccctgtc ccagcggtag tcgggctgca
     6541 gttggattcc ctgggtctgg atgtcgcgct cgcggatgcc cgccgcgcgg atggcggcaa
     6601 gaagcttctc ggtcttcgtc ttgttggccg cgaccgccgc ggtcgctgtc gccgccttgg
     6661 actgcgtccc gaccgtcatc gtcgcttcgt ctggaggagt cctcagggtc tcggcgatgt
     6721 ttacccgaac caagggcgta gcggccattt ccgcgatact cgccgtcggc gcctgttgcg
     6781 cagaagccag ccccggaacg gctaccgcgc ccgccaaaac gaagataatg aaagacttgc
     6841 gcatcgctca ccccttgatc gtaccgactt gaccaaaagt cgaacggtgg aaagccgctg
     6901 ctgaactgcg aatgaagccc accggcaggg cgggagggtt acgctagggc agctggccag
     6961 tcgtcctgaa cagagccagt ccgacgaaca ccgctgcgat gctgaccgcc accgatgcca
     7021 gcacataggc tgcggcgagc ccgtagttgt gccgttcgac gagaagcgcg gtctcgaggc
     7081 tgaaggccga aaaagtcgtg aaacctccaa ggataccggt gacgaggaag aagcgcaggt
     7141 gctggctcgt cccggttcgc cagccgaaat atccggctag caggccgatc gccagcgacc
     7201 cggcgatgtt gacgatcaaa gtgccgaagg ggaagccgta gccgagcagg cgcgccgccc
     7261 agacattgac tccatggcgc agggcgccgc cgatcccggc tccgatgaag gcgatcaggt
     7321 aaagcacggc ccctcctact gctgcattgc tgcgccaggc aggagccatc agccggtaag
     7381 gcggttacaa gggagacccc attccctgaa tgctgcttag cagcagccgc ttcggctgct
     7441 caagcgactc atgcacgagt tccgaagccg aatcaggcgg tgccgaccgg ctcgtcgagc
     7501 gtcagcgtgc tctccgcacc gcgccgctcg gcatccatcc aactttggcg aaggcttttc
     7561 gggagtgctt cgcgcacctt cgcaatctgg ccctccgaca catggttcga gagaacccgg
     7621 aacaccgagc gaacggcaag gtccggatcg acgggccggg tgtcgctcag ccattcggcg
     7681 acctccgcga cgaattcctc gcggctgttg catcccgtcg gaagcttcgc cggctcgaac
     7741 tggtcgtaat agacgccgcg gacgagcagc ggcagctgcg cgccaaggtg agcggcgaga
     7801 ttcaccgtca gccggtcccg aagcttgtga aggactgttg aaaggacttt ccacgccacc
     7861 tgcttgtccg ggccgaggtc ctcgcagatc tcgttcagcc agatgtgggt cgtttccagg
     7921 gtcttgtcga acacgtcgac gccgttggcg ctcatttccc cgtctcctcc tcgcagtgga
     7981 tccccctcac acagcaacgg aacggccccg cgaaagttgc tcgtctcgcc gtttggcagg
     8041 cgcttccaag cccctgcatg gaggctgcac caagcagtga ttcaaatcaa cgagagaccc
     8101 ggcgacaccg tctagcgtcg cggcatgatc gctccccaga cctttgctcg ctatgcggca
     8161 atgcgcgtcc cgcgctacac cagctatccg accgccccaa atttctggcc ggcaatcggg
     8221 gattccgact atcgggcctg gcttcgctcc gtggaaaccg gatccacggt ctcggtctat
     8281 ctgcacatcc ccttctgccg gcagatgtgc tggtattgcg gctgccacac cagcgttacg
     8341 catcgccagt cgccggtcag ccgttacgtc gagacgctgc tcgccgaaat cgcattggtc
     8401 gaatcggagc tccggcccgg cctcaggctc ggccacgtcc actggggcgg cggctcgccg
     8461 acgctcctcg agccggaaga cgtcggcaag atccactcgg cgctggcgcc ggccttcgtc
     8521 ttcgacccgc tcgccgaaaa tgcagtggag gtcgacccgc gaacgctgac tgaggagctt
     8581 gcggcggcat tcgcggaagc aggcgtcaac cgagccagcc tcggcgtcca gagcttcgat
     8641 cctgtcgtcc aggcggcaat caatcgggtc cagagtttcg agacgacggc cgcagcggcg
     8701 cgaatgctga ggaacagcgg gatcgcggca ctcaatttcg acttgattta cgggcttccg
     8761 cacgagtcgg tccagtcgtg cctcgacacg atcgagcagg ctctgacgct ccgtcccgac
     8821 cgggttgccg tgttcggcta tgcccacgtt ccctcgttca agccgcacca gaaaaagatt
     8881 gaagcagcgg cacttccgga tgcccgcgag cgtcagcgac aggcgctcgc gatggccgag
     8941 gcactgaccg cagccggtta ccgtcagatc ggcctcgatc atttcgcgct tccgggagac
     9001 agcctggccg tggcggcgga gcgacggcaa ttgcgccgca atttccaggg atacacggcc
     9061 gatccctgct cgacgctgat cggcttcggc gcctcggcga tcggccggat gccgcagggg
     9121 ttcgtccaga atgccacgcg tatccccgat tacgagaagc ggatcgcgag cgggcaactc
     9181 gccgtcgttc gcgactgccg cctcgccagc gacgacaatg agcgcgccgc gatcatcgaa
     9241 cagctgatgt gcaactaccg tgcgcacatc ggctcggtgg aagcgccgct ggaccagctc
     9301 gagcgcgacg gcctgatccg gcgcttgggc gatttggtcg aagtgaccga agacgcccgc
     9361 cccctggttc gcgcggtcgc ggccgcattc gatagctacc ttccaacctc cgccgcgacc
     9421 cacgttgccg cggtgtaggc ctcacccgca tttcgaatag ccgcactcca ggcaattgtt
     9481 gcatccctcg accttgacca gcgccgaagc tccgcattga ggacaggacg gcatcggcct
     9541 ggcacgcggc gtctcgaatg cagcggctgg caccggtgct tggagcccgc cgaggtggcg
     9601 ctcgacgatg tcgccgatgg ccgcgaggag cgaggggaca tagcggccct gcatccaggc
     9661 gccgccgcgc gggtcgaaca ccgccttcag ttcctcggcg acgaatgcga cgtcaccgct
     9721 ccgccggaac accgccgaca ccatccgcgt gaggccgagg gtccaggcat aatgctccat
     9781 gttcttggag ttgatgaaca tctcgaacgg gcggcgctgc ccgtcatgct cgacgtcgtt
     9841 gatggtgacg tagaccgcgt gcgggctctc cggccatttg agcttgtagg tcgagccgtg
     9901 aagctgctcc tcgcgcggag cgagcgtctc cggttcgggt ttcggtttgg cctccccgac
     9961 gctgaggaca gagcccgtaa ccgcattggg ccgataggtc gtcaagccct tgcagccgag
    10021 atggtagccc tcgacgtaga tatcggcgaa atcctcaaag ctgatgtcct cggggcagtt
    10081 tacggtcttc gagatcgagc tgtcgatcag agcctgcgcg gtcgcctgca tggtcagatg
    10141 atccgaaggg gaaagtgtct gcgcggaaac gaacaattcg ggcggcggag gcgcatcccc
    10201 cttgacctcg cgccatagcc gcatcgcata atcttcgacc ttctcttcgc gggtggtgcc
    10261 gtccggctgg cggatcttgc gcgtgtagga ataggcgaac acgggttcga tgccggacga
    10321 aacattgccg gcgagaagcg acgtggtgcc ggtcggggcg atcgaggtca gacagccgtt
    10381 gcggaggcca tgctctgcga tcagggcgcg ggtctcgtcg tcgagcgagg tcaggttcgg
    10441 ttgatcgagg atgactttgt cgtagagcgg gaacggcgct ttctcgccgg ccagcagcgc
    10501 cgacgcgcga taagcttcgc gcttgatcgt gttcagccac gagcgagtga gcgcaacggc
    10561 ttcgctgcga ccgtaagcgg cgccgcagaa cagcagggca tcggcgaggc cggtaatacc
    10621 gagcccgatc cgacgcttcg ccttcgcctc cgcctcctgc tccggcagcg ggtagcgcga
    10681 gatgtcgatg acattgtcga gcatccgcac cgcggtccgg gtcagctcgc cgagctgctc
    10741 ttcgtcgatg cgcgcgcctt cctcgaacgg ccggtccaca agccttgcga gattgatcga
    10801 gccgagcagg caggcgccgt atggaggcag catctgttcc ccgcacggat tgcttgcgga
    10861 aatggtctcg caatagccga gattgttctg cgcgtttgcc cggtccacga agatcacgcc
    10921 cggctcggcg acatcgtagg tcgcgcgcat cagcttgtcc cacagctcgc gggcgcggac
    10981 ggtgcgcatg gtggcgccgt tgaagaccag cggccattcg ctgtcgcttc cgagggccgt
    11041 catgaaggca tcggtcacca gcaccgacag gttgaagttg cggaatcggg ccggatcgcg
    11101 cttggcatcg atgaacgcct cgatgtcggg gtgatcgatc cgcaggcatc ccatcatcgc
    11161 cccgcgccgc tggccggcgg aatggaccgt ccggcacatc gaatcccagc aatccatgaa
    11221 gctcagcgga cccgacgcgt cggcggcaac tccgcggacc agggtcccgc tcgggcggat
    11281 ggtagagaaa tccattccca ccccgccgcc ctgctgcatc gtcagggcgg cctgctttag
    11341 atgctcgaag atgccgtcga ggctgtcggg gatggtcccc atgacgaagc aattgaacaa
    11401 ggtgaccgcg cggtcggtac cggcaccggc gagcactctt cccgccggaa tgaagcggaa
    11461 gtcggcgatg gcctcgcgaa accgctgctc ccaaagcgcc cggctggcgg gcgattccgc
    11521 ctcggctacc gctcgcgcca cccgctcggc ggtcgctgca aagctgtcgt caccttgccc
    11581 ttcggacgtt tggaatcggt atttcgcggt ccagatttct tccgccaacg ccacgtcgaa
    11641 aaacattcca ccctcccaca tattgtgggt atgggtttaa ccgaacacaa catgttccga
    11701 attgatccag cgcattgcag tcgcgaaaaa agcttgaagc cgctactgcg gagccgcgat
    11761 tgtcgggaaa ctcagccgcg aaacggctga ggccaaaggg ctattccgaa ggaaaaaatg
    11821 gtgggcgtgg caaggattga acttgcgacc cctgcgatgt caacacagtg ctctaccact
    11881 gagctacacg cccactcggg ggtggcattt aggggtggct tgccgagggc gcaagcgccg
    11941 aaacgcggcc gttcgcgagc ctagaggcgg ccgagcacgg ccttagagac ggccgagcac
    12001 ggccttagag acggccgtgc tggtcctcgg tctggaagat ccggtcgacc tcggccacca
    12061 ggtccttcag gtggaacggc ttcgacagca ttttcgcttc cggcgccgcg cggccgctct
    12121 gcagggcgac
//
LOCUS       DATAKH010000195        20261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_22831,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000195 DATAKH010000000
VERSION     DATAKH010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 20261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20261
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22831"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VHN55_08065"
     CDS             complement(<1..214)
                     /locus_tag="VHN55_08065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803917.1"
                     /translation="MLIAAVLILVGAAAAVWALAHYQPVARFLGVVPAAEAPALPAQQ
                     LRPQTDAEPQSAATLNPAIAEQIGALQ"
     gene            complement(256..930)
                     /locus_tag="VHN55_08070"
     CDS             complement(256..930)
                     /locus_tag="VHN55_08070"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEX2803918.1"
                     /translation="MRPLVIVRPEPGASATARAAEANGLTPVLVPLFKVEPAEWQAPD
                     PSEYDALLLTSANALRHAGIGLDGFRELPAYCIGEATAAAAREAGLTVTAAGTAGIDE
                     LLQRVPQGSRLLHLSGTHWREPANQTHSIRHLPVYDSAELPRPDRLALIEGAVVAVHS
                     PRAASTLARHADDLRLDRRQTAIAAISAETAAAAGPGWETVETAPEPSDSALLAIAAR
                     LCHNRG"
     gene            complement(927..1847)
                     /gene="hemC"
                     /locus_tag="VHN55_08075"
     CDS             complement(927..1847)
                     /gene="hemC"
                     /locus_tag="VHN55_08075"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEX2803919.1"
                     /translation="MPRNPRLGTRGSPLAMIQARKIASALEVAERWPAGHVEIVAIKT
                     SGDRITDRPLADVGGKGLWTKELDAALLAGEVDFCVHSMKDVEVVRPAEIRLAAIRPR
                     VYFEDKLIGAASLDELKQGAVVGTSSPRRAAQVLAARPDLKVVPLRGNVETRLKKLEA
                     GEVDATILSAAGLHRLGMDHIGTPIPLDIMLPAPGQGALAIECRTDDRDCMQLLKLLD
                     NSASRSAVMAERAFARALGGSCHSPVAALATCDLSQVQLRAEILSADGKDRVRDEASF
                     AAGKEEAAAKLATDMLERAPESIRRLFAAA"
     gene            1890..2921
                     /gene="tsaD"
                     /locus_tag="VHN55_08080"
     CDS             1890..2921
                     /gene="tsaD"
                     /locus_tag="VHN55_08080"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007713124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEX2803920.1"
                     /translation="MAIILGLESSCDDTAAALVTTDRRILAQAVVSQNDAHRPFGGVV
                     PEIAARAHVQILPDLVRKVFNDAKVSLDDVDAIAATAGPGLIGGVMVALMTAKGLALS
                     SGKPLVAVNHLEGHALSPRLVDPDLDFPYLLLLVSGGHCQILEVLGVGAYRRLATTID
                     DAAGEAFDKAAKLLGLPYPGGPAIEQLAKAGNPAAVPLPRPLVGSGEPHFSFAGLKSA
                     VQRAVGSGNHEPADIAASFQQAIVDCLVDRTRLALASSDSRALVVAGGVAANQAIRSA
                     LQQLAAASGRSFSVPPAWLCTDNAAMIAWAGGERYCAGMIDDLSAPARARWPLDPDAE
                     KVRGAGVKA"
     gene            2918..3904
                     /locus_tag="VHN55_08085"
     CDS             2918..3904
                     /locus_tag="VHN55_08085"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEX2803921.1"
                     /translation="MNMQKIAVIGGGAWGTALAQVAARAGRDVLLWAMEEEVVEAVNR
                     AHENPLFLSGIPLDPAIRATGELDDLGGCDAWLVVTPAQHMRAVLDKAPRCHVPRVLC
                     SKGIEESSGGMLHEVAADVCPGAPIAVLSGPTFAHEVATGLPTAVTLAAEDAGVAERL
                     RAALAQPTFRIYVSDDVAGAEVGGAVKNVLAIACGVVEGRGLGQNARAALIARGFAEM
                     TRFGVALGARRDTLAGLSGLGDLVLTCSSTSSRNYSLGVGIGGGKAATELMADRRTVA
                     EGAFTAPVLARLARDRGIDMPIVAAVDALLDGASVDSVLEELLSRPPRAEGV"
     gene            complement(3901..4068)
                     /locus_tag="VHN55_08090"
     CDS             complement(3901..4068)
                     /locus_tag="VHN55_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HEX2803922.1"
                     /translation="MKRPKHLDPPEYLSKSPPVPDPEPVTKTEPPAGEEAKPDPTRYG
                     DWEKKGIAIDF"
     gene            4097..5356
                     /locus_tag="VHN55_08095"
     CDS             4097..5356
                     /locus_tag="VHN55_08095"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006952333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEX2803923.1"
                     /translation="MPRAEGVPARRAALQMLDAVLRQGRTLDSAAGGSRGLSDRDQGL
                     AIAIAGEVLRRLPDLDALIDSATRQRLPDDSKARMVLRIALAQKIGLDTPDHALVATA
                     LPLVDGGPRRLVHGVLGTLLRRGVPPIEAPRLPADVEQRWSEAWGDEVVEAARRQIAH
                     RPPLDLTFKSERAAQAFAAETGGATLAPRNVRIQEAGSVTDIPGFGSGDWWVQDLAAS
                     LPARLLPNKAKEVIDLCAALDGKAMQIAAAGQRVTAVDASQQRLERLAENLKRTGLVA
                     DLVAADALGWEPNRLVHSILLDAPCSATGTFRRHPEVLYRARPRIIAESAELQSRLLE
                     RAASWLDPGGALVYSVCSLEPQEGEEMVAVFLREHRHFRVAPPEPGELPQFVTPAAEG
                     WVRILPGLLEKEGGLDGFFIARLVRSA"
     gene            5375..6037
                     /gene="rpe"
                     /locus_tag="VHN55_08100"
     CDS             5375..6037
                     /gene="rpe"
                     /locus_tag="VHN55_08100"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX2803924.1"
                     /translation="MARPLIAPSILSADFARLGEEVRAVDEAGADWIHIDVMDGHFVP
                     NLTIGPGVVKALRPHTDKPFDVHLMISPADLFLDAFAEAGADIITVHPEAGPHLHRTV
                     QRIKALGKKAGVSLNPATPAKALDYVLEDIDLVLVMSVNPGFGGQKFISSQLRKIEAI
                     AKRVAKEKLAVLIEVDGGIDPETAPQAVNAGASVLVAGSATFRGGPDSYAANIRALRG
                     EG"
     gene            6034..7683
                     /locus_tag="VHN55_08105"
     CDS             6034..7683
                     /locus_tag="VHN55_08105"
                     /inference="COORDINATES: protein motif:HMM:NF019552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEX2803925.1"
                     /translation="MSADTAQSAVVRKLAKGSLLSRLTGSRRQPLRLVAVPRDHVQGD
                     RGRGDSLLAGKLICGGETLDLADLDFAAIGAEGPLAEQLQGFSWLRDLAAAASRERGS
                     RLAEAIVGRWLLTHGTRVDAAWRADLWGERILFWTAYAPYILSSSDAGYRSALLNTLV
                     RGARHAEANADRAPAGIRQVTAWAGVVAAALLVQGGVARIARAESGLGRALASAQFDD
                     GGLVSRTPYEQVRLVDHLGLLRSAYFAAKHTPPDRLEAAAAAALSALHGVILGDGGLS
                     SWQGGNSGDPARLTAIIEGCGIRARALRQPRGWGFHRLSALGTVVVIDAAPPPPPKAA
                     PSGCASTLAFELSDGAQRLVVNCGGPGAFPDKMPDGLATALQSTAAHSTLTLADTNST
                     AILADGSLGKGVTDVIIERTEDNDSSRLDASHDGYSRSFGLIHRRVLVLGNDGKELRG
                     TDELTPKGRRRSKDGTPFAIRFHLAHGLEPTITADGMGAILRSPGAPPWNFRSRGAAI
                     GVEESLMVDRRGIPHRTMQLVINGEASATGAEVHWQFRRSS"
     gene            7697..9289
                     /gene="purH"
                     /locus_tag="VHN55_08110"
     CDS             7697..9289
                     /gene="purH"
                     /locus_tag="VHN55_08110"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007686983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEX2803926.1"
                     /translation="MTDLVPIRRALISVSDKAGLDGLAKALAGRRVELVSTGGTAAKL
                     RESGADPRDISDLTGFPEMMDGRVKTLHPKVHGGLLAVRDNAEHVTAMDEHEIAAIDL
                     VVVNLYPFEATVARGAGRDDIIENIDIGGPSMVRSAAKNHAFVTIVTDPADYDELLAE
                     LERNDGATSLDFRKRMAAKAYALTAAYDSMISQWFAYGDQGQRWPESWTFSSKLKMEL
                     RYGENPHQKAALYIPAGPHARGIAQAEQLQGKELSYNNLNDANAALELVSEFRCAEPT
                     VVIVKHANPCGVATRGSLIDAWGEALACDSVSAFGGIVATNRPLDSATAHAITQIFTE
                     VVVAPDADDDAKAIFAKKKNLRLLLTGELPDPARPGQALAIIAGGLLVQDRDNGTINR
                     DQLKCVTKREPTSQELADCLFAWTVAKHVKSNAIVYAKDGVTAGIGAGQMNRRDSARI
                     AAIRAREAAEAAGWPEPRTVGSAVASDAFFPFADGLLSAAEAGATAVIQPGGSIRDEE
                     VIAAADKAGLAMLFTGMRHFRH"
     gene            complement(9296..10849)
                     /locus_tag="VHN55_08115"
     CDS             complement(9296..10849)
                     /locus_tag="VHN55_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013848229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX2803927.1"
                     /translation="MSDPGPQPGAASADLAALARGGRINFFGFVLRLAARLPFLFIAG
                     RLYGPELVGRFAYAIIVIELAAQLATIGLKRGLAQQLAKTDQPHVCVVFDGLLAAFVT
                     SAVASAILMVFPLAMFPNGDIHGADWLLPLVIFGIAGADVALAALAYRHDIASTVRVR
                     AVVEPVTISVAAGLLYFIVPQDGLIVAYVISVAAGLLVAMWRLARNYGVPHGWKPHPA
                     TVWGMARQNLPLAGADAIEWGSRRLDIAILGLFVAPYWVGIYYMAQNVASLPAKLKTS
                     FDPILAPVITQKLSEGNLPAVAKQVRQVGYWVISAQAGIALALAIPGEAVMGLIGPQF
                     VAGTAALAFLLFAEVVAATAAVSEAALVYVARLRNLLISLLMIACQAVLTVAIILGVA
                     RLPLPVDRVEAFQSAGAAVALMLALALASVLKANLLGRLLHSPVQGWRWSLLWAAAAG
                     IVVGSFATFLPEWTELIFGIPAILVAFGAVLWVKGFGPEDRELFRMKKADIENLQVPA
                     PGTTEDPIR"
     gene            complement(10846..13650)
                     /gene="polA"
                     /locus_tag="VHN55_08120"
     CDS             complement(10846..13650)
                     /gene="polA"
                     /locus_tag="VHN55_08120"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEX2803928.1"
                     /translation="MADGNHLYLVDGSSYIFRAYHRLPPLTNRHGQPAGAVYGYTTML
                     WKLADGLNKADGPTHMAVILDASEQTFRNDMYDQYKAHRPPPPEDLVPQFPLIRTATR
                     AFSIPCIEEAGLEADDIIACYVTAAKQAGWKVTIVSSDKDLMQLVEDGKVDMLDTMND
                     RRIDRAYVENKFGVGPETLGDVLALMGDKVDNIPGVPGIGPKTASQLILEYGSLEAVL
                     ASAESITKPKLKQSLIEHADNARLSRKLVELVCDAALPQPLEDLALTGIPPEPLKEFL
                     EEQGFKSLLNRLVGGGGPTSGRSSSGGGLNLAAASIESAPAGTSEPEAIAVDRSTYET
                     VTDEAALDRWIAEASALGVVAIDTETDCIDCIIARLAGISLATAPNRACYIPVGHSGA
                     DLYSDAPEQLPMAVVIEKLKPLLEDPAVLKIGHNFKYDWVMFDKAGIDVAPVDDTMIM
                     SFDLDAGLHGHGMDELAKLHFDHECIPFKSVCGTGAKQITFDKVPLPQATQYAAEDAD
                     ITFRLWQRLKPRIASENVTRVYERVDRPLVPVISRMERRGVKVDRDYLAKLSREFAEE
                     IVRLEERIYEAACGPFTIGSPQQLGEVLYGRLGLKGGRKGKSGKYSTDVTELERLAGE
                     GVECARLVLEWRQLSKLKSTYTDALQAQINPETGRVHTSFSLAGAQTGRLASNDPNLQ
                     NIPIRTEIGRKIRDAFVAEPGNVLMSADYSQIELRLAAHMADVPQLKAAFRDGADIHN
                     MTAEELFGSADRDNRNKAKTVNFAILYGISSWGLAGRLGIPKDEGKAIIDRYFERFPG
                     IRTYIEQTLQFAREHGFTRTLFGRKTHFPNIRAGNPSHRGGAERAAVNAPIQGTSADL
                     IKRAMARMDDALAEAGLEGVKMLLQVHDELVFEVPEGREEEAAEVVRSVMSSAGSPGL
                     ELDVPLDVQVGWGEHWGAAH"
     gene            13768..14178
                     /locus_tag="VHN55_08125"
     CDS             13768..14178
                     /locus_tag="VHN55_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803929.1"
                     /translation="MTAHYKEILAARADIVASPAPRACEDHSFEIPTGIYVAMALCFA
                     GAIAVLAFAFRSEMAVSYGIVFAFLAAFFAIPAIFVRSARGSKPLDWSVFREKGIMTA
                     TGRTGGGEAAMLVLLLPFLILCWAIAVATIAALV"
     gene            14301..14741
                     /locus_tag="VHN55_08130"
     CDS             14301..14741
                     /locus_tag="VHN55_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HEX2803930.1"
                     /translation="MVSRKLMRILAPMAFLAMSQGAAAATLVVTKSISCTCCEGWVDH
                     MRKAGFDVEVHSVADVSPTAKRLGVPDKLRSCHTAKIGDYVIEGHVPAADVKRLLAQK
                     PKAAGLAVPGMVVGSPGMETGARAEPYKTLLFTKDGKTKVFASH"
     gene            complement(14746..16326)
                     /gene="nadB"
                     /locus_tag="VHN55_08135"
     CDS             complement(14746..16326)
                     /gene="nadB"
                     /locus_tag="VHN55_08135"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEX2803931.1"
                     /translation="MSRDFDVLIVGSGAAGLTAALNLAPEKKVAVIAKGAVGEGATNW
                     AQGGIAAVLEEGDTFEAHVNDTMIAGAGLNDRKVVEYVVGEAPAAIARLAELGVPFAT
                     EGGALHLTREGGHSHRRIVHVADATGRAVQQALEGAAAKQPNITLLPDMVAIDFVTGR
                     HAVDFSTSGSIHGLYAYNRKTQRVETLTGRATILASGGAGRAYLFSTAPRGATGDGIA
                     MAWRAGCRVSNMEFMQFHPTCLYNLEVKNFLITEAVRGEGGLLVNPRTRRRFMLDYDE
                     RAELAPRDIVARAIDNEIKRDGLDFVWLDISHRESEFVKSHFPTIHEKLLTLGIDMTS
                     EPIPVVPAQHYTCGGVLVDRRGRTDAPGLYAAGEVTQSGLHGANRLASNSLLECVVFG
                     EAAAKDILASWDSLGDVPKIRAWDESRVTDSDEEVVIHQIWGEIRRFMWNYVGIVRTT
                     KRLERAKRRIDLIRQEVTDYYKNFRVTPDLIELRNLVEVADLIIRSALSRQESRGLHY
                     TLDYPEPQPAATDTVLVP"
     gene            complement(16323..17246)
                     /locus_tag="VHN55_08140"
     CDS             complement(16323..17246)
                     /locus_tag="VHN55_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2803932.1"
                     /translation="MSSAEPAIRIDSLSKVYEGGKLALDGVSFDVPRGEIFGLLGPNG
                     AGKSTLINILAGLVTKSGGTAEIWGFDIDRHPRNAKRAIGVVPQEIIFDPFFTPRETL
                     EIQAGLYGVPRSQRRSDELLAAMHLTDKANAYARTLSGGMKRRLLVAKAMVHSPPILV
                     LDEPTAGVDVELRRQLWDYVGSLNRQGITVVLTTHYLEEAEKLCDRIAIINHGKMIAN
                     EPTRELVAKAQEKAVVVTIDRDLDRVPANDAFDNIALVDERTLEITYRKDRVNAGQIL
                     AALTDGGLGIVDVSTRDPDLEDVFLSLVAEQ"
     gene            17348..17875
                     /locus_tag="VHN55_08145"
     CDS             17348..17875
                     /locus_tag="VHN55_08145"
                     /inference="COORDINATES: protein motif:HMM:NF025710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4402 domain-containing protein"
                     /protein_id="HEX2803933.1"
                     /translation="MPVRMVRLLLSFSLALALMVSAPAPVRAATPATDATATAIVLRP
                     LTLLKLRNLDFGGLLSSATAGTAILDPSTGAVTTTGGVVAASGPTMSARFMGAGTRKT
                     PVIVRIPKNPVTLTRVGGTETMTVSNWTMDGSTTRIIQENETFEFRVGGRLNVAANQM
                     QGTYVGTFDVTAQYP"
     gene            17934..18134
                     /locus_tag="VHN55_08150"
     CDS             17934..18134
                     /locus_tag="VHN55_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006954275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEX2803934.1"
                     /translation="MTTLPPPEVYKVSTTKVACDGSGAVSPELGHPRIYLRIDPAIGF
                     VECGYCDRRFILEGGVADTGPK"
     gene            18131..19540
                     /gene="tldD"
                     /locus_tag="VHN55_08155"
     CDS             18131..19540
                     /gene="tldD"
                     /locus_tag="VHN55_08155"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEX2803935.1"
                     /translation="MNPRQLLYRSLDPDDARRLAARHLSSCDDGELFLEHSVSEAFGF
                     DDGRLKTASYDSASGFGLRGVTGETTAFAHANEISADAIARAAATLTLLDPAKGAAAP
                     PPARTNQAMYSPDNPLTEVPFADKVALCQQIDAAARARDPRVAQVSVGLTASWRVIEV
                     IRADGFVASDVRPLVRLGVQIVAADGGRRETGHFGLGGRHLYERLFDPATWNRAIDEA
                     LAQALTNLQSVAAPAGEMPVVLGPGWCGVLLHEAVGHGLEGDFNRKGTSAFSGRIGQR
                     VAAPGVTVVDDGAIEQRRGSLTIDDEGTPTRRNVLIEDGILKGYLQDRLNARLMGMEP
                     TGSGRRESFAHAPMPRMTNTFMLAGNDNPGELVERVKDGVYAKSFGGGQVDITSGKFV
                     FSCTEAYRIRGGKLAEPVKGATLIGDGPSVLTRIKGIGNDFALDEGVGVCGKGGQSVP
                     AGVGQPSLLIDGLTVGGTG"
     gene            19540..20076
                     /locus_tag="VHN55_08160"
     CDS             19540..20076
                     /locus_tag="VHN55_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019054511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HEX2803936.1"
                     /translation="MTDWRGRVLDFWFGLEKQQWWRGPPELDEQVRDRFLDLWKEKRQ
                     LPADSFLADAPTAIAAVILFDQFPRNIFRGHAEQFATDPLALAIAKGAIERDLDEQMD
                     EEQRSFLYMPFQHSEDLDDQNRAVLLFTQLGDEEQLDYAKKHRDVIARFGRFPHRNAM
                     LGRAPREDEVAAGDVVPW"
     gene            20073..>20261
                     /locus_tag="VHN55_08165"
     CDS             20073..>20261
                     /locus_tag="VHN55_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014078158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HEX2803937.1"
                     /translation="MSGLAELARFPTRVDADLARLRLEAAGIGAVLFDEGMNYIGLGP
                     AMPVRLMVLEEDVEEAARL"
BASE COUNT         3355 a         6794 c         6670 g         3442 t
ORIGIN      
        1 cctgcagcgc accgatttgc tcggcgatcg cgggattgag cgttgccgcg ctttgcggtt
       61 cggcgtctgt ttgggggcgg agctgttgcg ctggcagcgc cggcgcctcc gcggccggaa
      121 caacgcccag aaagcgcgca accggctgat agtgggcgag cgcccatacc gccgcagcgg
      181 cgccgacgag gatcagcacg gccgcgatca gcaaccgcgc tccccagccc atctcgcctt
      241 tcccggcccg ctccatcagc cgcggttgtg gcataggcga gcggcgatgg cgagaagcgc
      301 cgaatcgctg ggctcggggg ccgtttcgac cgtttcccac cccggacctg ccgccgccgc
      361 tgtctcggcg ctgattgcag cgatcgcggt ctgtcgccga tccaggcgca agtcgtcggc
      421 atggcgtgcc agggtcgagg cggcgcgcgg cgagtgaacc gcgactaccg cgccttcgat
      481 cagcgcaagc cgatccgggc gaggcagctc ggccgaatcg taaacaggca gatggcggat
      541 cgaatgggtt tgattcgccg gctcccgcca atgcgttccc gaaaggtgaa gcagccggga
      601 tccttgcgga actcgctgca gcagctcgtc gataccggcg gttccggccg cggtgacggt
      661 aagtcccgct tcccttgccg ccgccgccgt cgcctcgccg atgcaataag cgggcagctc
      721 tcgaaagcca tcgagcccga ttcccgcatg gcgaagcgcg tttgcgctcg tgaggagcag
      781 ggcgtcatat tcactcggat ccggcgcctg ccattccgcc ggctcgacct tgaaaagggg
      841 cacgagcaca ggcgtcaggc cattcgcctc ggctgccctt gcggttgcgc tcgcccctgg
      901 ttcggggcgg acaatgacga gcggcctcat gcggctgcga acaacctccg gatcgactcg
      961 ggcgcgcgct cgagcatgtc ggtcgcgagc ttcgcggcgg cttcctcctt gcccgcggca
     1021 aaactggctt cgtcgcgaac gcggtccttg ccgtcggcgg agaggatctc ggcgcggagc
     1081 tgcacctggc tgaggtcgca ggtcgcgagc gccgccaccg gcgagtgaca ggagccgccg
     1141 agcgcccgtg caaacgcccg ctcggccatg accgcggagc ggctcgccga attatcgagc
     1201 agcttgagca gctgcatgca gtcgcggtcg tcggtgcggc attcgatcgc aagcgcgccc
     1261 tgtcccggcg ctggaagcat gatgtccagc ggaatgggcg ttccgatatg gtccatccca
     1321 agccggtgaa gaccggccgc ggacagtatc gtcgcgtcga cctcgccggc ctcaagcttc
     1381 ttgagccgag tttcgacatt gccgcgcaac ggcaccacct tcaggtcggg ccgcgccgcg
     1441 agcacctggg cggcccggcg cggagacgat gtgccgacga ccgcgccctg cttgagctcg
     1501 tcgagcgagg ctgctccgat cagcttgtcc tcgaaataga cccgcggccg gatcgccgcg
     1561 aggcggatct cggccggccg aaccacctcg acgtccttca tcgagtggac gcagaaatcg
     1621 acctcccccg ccagcaaggc cgcatccagc tccttcgtcc acaacccctt gccgccgacg
     1681 tccgcgagcg gccggtcggt aatccggtcg ccgctggttt taattgcgac gatctcgacg
     1741 tgccccgccg gccagcgctc ggcgacctcg agcgcggatg caatcttgcg cgcctggatc
     1801 atcgccagcg gcgatccacg ggttccaagt ctcgggtttc ggggcatcgc cttccactag
     1861 tccaacggtt cgggcaaagg aaccaacgca tggcgatcat cctcggcctc gaatccagct
     1921 gcgacgacac cgctgcggcg ctggtcacga ccgaccggcg aatcctggcg caggcggtcg
     1981 tttcgcagaa cgacgcgcac cggccgttcg gcggagtggt tcccgagatc gccgcgcgcg
     2041 cccacgtgca gattcttccc gatctcgtcc gcaaggtatt caacgacgcg aaggtctcgc
     2101 tcgacgacgt agacgccatc gccgccaccg ccgggccggg gctgatcggc ggggtcatgg
     2161 tcgcgctgat gacggccaag ggcctcgctc tgtcgtccgg caagccgctg gtcgcggtca
     2221 atcatctcga gggacacgct ttgtcgccgc gcctcgtcga ccccgatctc gactttcctt
     2281 acctgctgct tctggtttcc ggcggccatt gccagatcct cgaagtgctt ggagtcggcg
     2341 cgtaccggcg gctcgcgacc acgatcgacg atgccgcggg cgaggcgttc gacaaggcag
     2401 ccaagctgct tggcctgccc tatcccggtg gcccggcaat cgagcagctg gcgaaggcgg
     2461 gcaacccggc ggcggtgccg ttgccgaggc cgctggtggg atcgggggag ccgcattttt
     2521 cgttcgcggg cctgaagagc gcggtccagc gcgcggtcgg gtcgggcaac cacgagcccg
     2581 ccgacattgc cgcgagcttc cagcaggcga tcgtcgactg cctggtcgac cgcacccggc
     2641 tcgcgctcgc gagcagcgac tcacgtgcgc tggtcgtggc ggggggagtc gccgccaacc
     2701 aggcgattcg ctccgcgctc cagcaactcg cggcggcgag cggccgctcg ttcagcgtcc
     2761 cgccggcgtg gctgtgcacc gacaatgcgg cgatgatcgc ctgggcgggc ggcgagcgct
     2821 attgcgccgg aatgatcgac gatctctcgg cccccgcgcg agctcgctgg ccgctcgatc
     2881 ccgatgcgga aaaggtccgc ggcgcgggcg tgaaggcatg aacatgcaga agatcgcggt
     2941 tattggcggc ggcgcctggg gcactgcact cgcccaggtc gcggccaggg ccgggcgcga
     3001 cgtcctgttg tgggcgatgg aggaggaggt cgtcgaggct gtcaaccgcg cccacgagaa
     3061 cccgctgttc ctgtccggaa tcccgctcga cccggcgatt cgggcgacag gcgagctcga
     3121 tgacctcggc ggttgcgacg cctggctcgt cgttaccccg gcccaacaca tgcgcgccgt
     3181 gctcgacaag gcgccgcgct gccatgttcc gcgggtactc tgctcgaagg gcattgagga
     3241 aagcagcggc ggaatgcttc acgaggtcgc ggcggatgtc tgccccggtg ccccgatcgc
     3301 ggtcctctcc ggcccgactt tcgcccacga ggtcgcaacg ggcctcccga ctgcggtgac
     3361 cctcgcggcc gaagacgccg gagtggcgga gcggcttcgc gccgcgctcg cccagccgac
     3421 cttccggatc tacgtcagcg acgatgttgc cggcgccgag gtcggcggag cggtcaagaa
     3481 cgtcctcgcc atcgcctgcg gggtcgtcga gggccgcggg cttggccaga acgcccgggc
     3541 ggcgctgatc gcccgcggct tcgccgagat gacgcgcttc ggagtcgctc tcggcgcgcg
     3601 ccgcgacacg ctcgccggcc tttccggcct tggcgaccta gtcctcacct gctcgtcgac
     3661 aagctcgcgc aattattccc tcggagtcgg catcggcgga gggaaagcgg caaccgagct
     3721 aatggccgat cgccgaaccg ttgccgaagg cgccttcaca gcccccgtgc ttgcgcgcct
     3781 cgctcgagat cgcggcatcg acatgccgat cgtcgcggcg gtcgatgcgc tgctcgacgg
     3841 cgctagcgtc gattcggtgc tcgaggagct gctgtcgcgc ccgcctcgcg ccgaaggcgt
     3901 ctagaaatcg atcgcgatgc ccttcttctc ccagtcgccg taccgggtcg ggtcaggctt
     3961 cgcttcctcg ccggcgggag gctcggtctt cgtcaccggc tccgggtccg gaaccggcgg
     4021 cgacttcgac agatattccg gcgggtcgag atgcttcggt cgcttcacgg acggaagatg
     4081 agccttggct gagcgaatgc caagggccga aggcgtgccg gcgaggcgcg ccgctctgca
     4141 gatgctcgac gcggtgctgc ggcaagggcg aacgctcgac tccgcggcgg gcggatcgcg
     4201 cggcctttcc gaccgcgacc agggcctcgc aatcgcgata gccggcgaag tgctccgccg
     4261 ccttccagat ctcgacgcgc tgatcgacag cgcaacaagg caacgccttc ccgatgattc
     4321 caaagcgcgc atggtgcttc ggatcgcgct cgcgcagaag atcggcctcg atacgcccga
     4381 tcatgcgctg gtcgccaccg cgcttccgct ggtcgacggg gggccacggc ggctcgttca
     4441 tggcgttctc gggaccttgc tccgccgcgg ggtcccgccg atcgaagcgc cgcgcctccc
     4501 agccgatgtc gagcagcgct ggagcgaagc ctggggcgat gaggtcgtcg aagccgcgcg
     4561 gcggcagata gcgcatcgtc ctccgctcga cctgacgttc aagtcggagc gggcggcgca
     4621 ggcgttcgca gccgaaaccg gcggagcgac acttgctccc cggaatgtgc gtatccagga
     4681 agcgggatcg gtgaccgata ttcccggctt cgggtccggc gactggtggg tccaggacct
     4741 cgctgcgtcg cttccggcgc ggctgcttcc gaataaggcg aaagaggtga tcgacctttg
     4801 cgccgctctg gacggcaagg cgatgcagat tgccgccgct ggccagcggg tcacggcggt
     4861 tgacgcttcg cagcagcgac tggaacggct ggcggaaaac ctcaagcgca cgggcctggt
     4921 ggccgatctc gtcgccgccg acgcgctcgg gtgggagccg aatcgtctag tccactcgat
     4981 cctgctcgat gcgccctgct cggccaccgg cacgttccgc cgtcacccgg aggtcctcta
     5041 ccgcgcccgg ccgcgcataa tcgccgaatc cgccgagctt cagtccaggc ttctcgaacg
     5101 ggctgcgtcg tggctcgatc cggggggagc gctggtctac tccgtctgct cgctcgagcc
     5161 gcaggagggc gaagagatgg ttgccgtgtt cctgcgcgag catcggcatt tccgagtcgc
     5221 tccgcctgag ccaggcgaac ttccgcagtt cgtcacaccg gcggcggagg gctgggtgcg
     5281 aatcctcccc ggcctgctgg aaaaagaggg cgggctcgac ggcttcttca tcgcgcgcct
     5341 tgtccgttcc gcttaatccg ttctaatcgg gccaatggct cgcccgctga tcgccccttc
     5401 catcctttcc gccgatttcg cccggcttgg cgaagaggtg cgagcggtcg acgaggccgg
     5461 cgccgactgg atccacatcg acgtgatgga cgggcatttc gtgcccaacc tgacgatcgg
     5521 gccgggggtg gtgaaggcgc ttcggccgca caccgacaag ccgttcgatg tccatctgat
     5581 gatttcgccg gccgatctgt tcctcgacgc tttcgcggaa gccggagcgg acatcatcac
     5641 cgtccatccc gaagccggcc cgcaccttca ccgcaccgtc cagcggatca aggcgctcgg
     5701 caagaaggcg ggcgtgtcgc tcaacccggc aacgccggcc aaggcgctcg actatgtcct
     5761 cgaagacata gacctggtgc tggtgatgag cgtcaatccc ggattcggcg ggcagaaatt
     5821 catctcaagc cagctgcgca agatcgaggc gatcgcaaag cgagtcgcta aggaaaagct
     5881 cgctgtcctc atcgaggttg acggcggcat cgaccccgaa accgcgcccc aggccgtgaa
     5941 cgctggcgcc agcgtcctcg tcgccggctc ggcgaccttc cgcggcggtc cggacagcta
     6001 cgcggcaaac atccgagcgc ttcggggaga gggatgagcg ccgacacggc tcaaagcgcc
     6061 gttgtcagaa agcttgccaa gggttcgttg ctgtcccgcc tgacgggatc gcggcggcag
     6121 cctctgcggc tggtcgcagt cccgcgcgac catgtccagg gcgaccgcgg gcgcggcgac
     6181 tcgctgctcg ccggaaagct catctgcggt ggcgagacgc tcgaccttgc agacctcgat
     6241 tttgccgcca tcggcgccga aggtcccttg gccgagcagc tccagggctt ctcctggctc
     6301 cgcgaccttg ccgccgccgc atcccgcgaa cgcggctcgc gccttgccga agccatcgtc
     6361 ggccgctggc ttctcactca tggcacccgg gtcgacgccg cctggcgggc ggacttgtgg
     6421 ggcgagcgaa tcctgttctg gactgcttac gcgccgtaca tcctgtcgag cagcgacgcc
     6481 ggctaccgct ccgcattgct gaacaccctt gtccgcggcg cccgccatgc cgaagccaat
     6541 gccgaccgcg ctccggccgg catcaggcag gtcactgcat gggccggagt cgtcgccgcg
     6601 gcattgctcg tccagggcgg agtcgcgcgg atagcacgcg ccgagtccgg cctcggcagg
     6661 gcgctcgctt ccgcccagtt cgatgacggc ggcttggtca gccgaacgcc gtacgagcag
     6721 gtccgcctgg tcgaccatct cggccttctg cgttcagcct atttcgccgc caagcacacg
     6781 ccgcccgacc ggctcgaggc cgcagccgcc gcagcgctgt cggcgctcca tggagtcatc
     6841 ctcggcgacg gcgggctgtc gagctggcag ggcggtaact ccggcgatcc ggcacgactg
     6901 accgcgatca tcgaaggctg cgggatccgc gctcgggctc ttcgccagcc gcgtggctgg
     6961 ggctttcacc ggctgtccgc gctggggaca gtcgtcgtga ttgacgcagc ccccccaccc
     7021 cctccgaaag cggcgccgtc aggctgcgcg tcgactttgg ctttcgagct ttccgacggc
     7081 gcgcagaggc tggtcgtcaa ttgcggcggt cccggggcat ttcccgacaa gatgcccgac
     7141 gggcttgcga ccgcgctgca atcgaccgcg gcgcacagca ccctcactct cgccgatacc
     7201 aattcgactg caatcctcgc cgacggatcg ctcggtaaag gcgtcaccga cgtcatcata
     7261 gagcggaccg aggataatga ttcgagccgt ctcgacgcca gtcacgacgg ctattcgcgc
     7321 tccttcggac tcattcaccg ccgggtgctc gtcctcggca acgacggcaa ggaattgcgc
     7381 ggcaccgacg agctgacgcc gaaaggcagg cgccgctcga aggacgggac tccgttcgcg
     7441 atccgtttcc acctcgccca cgggctcgag ccgacgatca cagccgacgg aatgggcgcg
     7501 atccttcgct cgcccggagc gccgccgtgg aacttccgtt ctcgcggagc tgcgatcggg
     7561 gtcgaggaaa gcctgatggt cgaccgccgc ggaatcccgc acaggacgat gcagcttgtg
     7621 atcaacggcg aagcctcggc aacgggcgcc gaagttcact ggcagttccg ccgatcgagc
     7681 tgacaaagga gtgacaatga ccgacctcgt gcccattcga agggcgctga tttccgtttc
     7741 cgacaaggcc gggctggatg ggcttgcaaa ggcgctcgcg ggccgcaggg tggagctggt
     7801 ctcgacggga gggacggcgg cgaagctccg cgaaagtggt gccgatccac gtgatatcag
     7861 cgaccttacg ggcttcccgg aaatgatgga cgggcgggtc aagactcttc acccgaaggt
     7921 tcacggaggc ctgctcgccg tccgcgacaa cgctgagcac gtcacggcga tggacgagca
     7981 cgaaattgcg gcgatcgacc ttgtcgtggt caatctctac ccgttcgagg cgacggtcgc
     8041 tcgcggcgcc gggcgcgacg acatcatcga gaatatcgac atcggcgggc cttcgatggt
     8101 gcgctcggcg gcaaaaaacc acgccttcgt gacgatcgtg accgacccgg cggattacga
     8161 cgagctcctc gccgagctgg agcgcaacga cggcgcgacc tcgctcgact tccgcaagcg
     8221 gatggcggcc aaggcctatg cgctcaccgc cgcttacgat tcgatgatct cgcaatggtt
     8281 cgcttatggt gaccagggcc agcgctggcc cgaaagctgg accttctcgt ccaaactcaa
     8341 aatggagctg cgctacggcg agaacccgca tcagaaggcg gcgctctata tccccgccgg
     8401 tccgcacgcc cgcggtatcg cccaggccga gcagctccag ggcaaggagc tcagctacaa
     8461 caacctcaac gacgccaatg cggcgctcga gctggtttcg gaattccgct gcgccgagcc
     8521 gacggtggtc atcgtcaagc acgccaaccc ttgcggagtc gccacacgcg gatcgctgat
     8581 cgacgcctgg ggcgaagcgc tcgcctgcga cagcgtttcg gccttcggag ggatcgtcgc
     8641 gaccaaccgg ccgctcgact cggcgactgc gcacgccatc acgcagatct ttaccgaggt
     8701 cgtcgtggct cccgatgcgg acgatgacgc aaaggcgatc ttcgcaaaga agaagaacct
     8761 gcgcttgctc ctaacgggcg agcttcccga cccggcgcga cccggtcagg ccctggcgat
     8821 catcgccggg ggactgctgg tgcaggaccg cgacaacggc acgatcaatc gcgaccagct
     8881 caaatgcgtg acgaagcgcg aaccgacgag ccaggagctc gccgactgcc tgtttgcctg
     8941 gacggtcgcc aagcacgtca agtcgaatgc gatcgtctac gccaaggacg gcgtcaccgc
     9001 cggcatcggc gcagggcaga tgaaccggcg cgacagcgca cggatcgccg caatccgggc
     9061 gcgcgaagcg gcggaagctg ccgggtggcc ggagccgcga accgtcggat ccgcggtcgc
     9121 ttctgatgct ttcttcccgt tcgccgacgg gctgctttca gccgccgagg cgggcgcgac
     9181 ggccgtgatc cagccgggag gctcgatccg cgacgaagag gtcatcgccg ccgccgacaa
     9241 agcggggctc gcgatgctgt tcacggggat gcggcatttc cggcactagc cgaattcagc
     9301 ggattgggtc ttcggtcgtt ccgggcgcag gcacctgcag gttttcgata tcagccttct
     9361 tcatccggaa cagctcgcgg tcctcgggtc caaatccttt cacccagaga acggcgccga
     9421 acgcgacgag gatcgccggt attccgaaaa tcagctcggt ccattcgggc aggaaggtgg
     9481 cgaaggagcc gacaacgatg ccggccgccg ccgcccacaa aagtgaccac cgccagccct
     9541 ggaccggaga atggagcagt cggcctagga ggttggcctt caggaccgag gcgagcgcca
     9601 acgccagcat taacgccacc gccgcgccgg cgctctggaa agcctcgacc cggtcaaccg
     9661 gcaacggcag tctcgccacg ccaagaatga tcgcaaccgt gagcaccgcc tgacaagcga
     9721 tcatcagcaa cgaaatcagc agattgcgaa gccttgcaac gtagacgagc gccgcctccg
     9781 acaccgccgc cgtcgcggcg acaacttcgg cgaacagcag gaaggcaagg gcggcggtgc
     9841 cggcaacgaa ttgtggcccg atcagcccca taaccgcctc gcccggaata gcgagcgcaa
     9901 gcgcgatccc ggcctgcgcg gagatcaccc aatagccgac ctgacgcacc tgcttcgcga
     9961 cggcgggaag gttgccctca gacagcttct gcgtgatcac tggtgcaagg attgggtcaa
    10021 agctggtctt tagcttggcc ggaagcgaag cgacgttctg ggccatataa taaatgccga
    10081 cccaataagg cgcgacgaac agtccgagga ttgcgatgtc gaggcgccgt gacccccatt
    10141 cgattgcgtc ggctccggca agcggcaagt tttgccgggc cattccccag acggtggcgg
    10201 ggtgcggctt ccacccgtgc gggacgccgt agttgcgagc cagcctccac atggcgacga
    10261 gcagaccggc ggcgaccgag atgacatagg cgacgatcag cccgtcctgc gggacaatga
    10321 agtaaagcag acccgcggcg acgctgatcg tgaccggctc taccactgct cgaacgcgga
    10381 ctgtggaagc gatgtcgtgg cgatacgcta gcgccgcgag cgcgacgtcg gcgccggcaa
    10441 tcccgaagat caccagcggc agcagccagt cggcgccgtg gatgtcgcca ttcgggaaca
    10501 tcgccaatgg gaacaccatc aggatagcgc ttgccaccgc cgacgtgacg aaggcggcta
    10561 gaagtccgtc gaagacgacg cagacgtgcg gctggtcggt cttggcgagc tgctgcgcca
    10621 agccgcgctt gaggccgatc gtggccagct gcgccgcaag ctctatgacg atgatcgcat
    10681 acgcgaaccg gccgaccagc tccggcccgt acaaacgacc ggcgatgaac aggaacggca
    10741 gccgcgccgc gagccgaagc acaaagccga agaaattgat ccgtccgccg cgggcgagcg
    10801 cggccagatc ggcacttgcg gcgcccggtt gcggtccagg gtcgctcaat gcgcggcgcc
    10861 ccaatgctcg ccccagccga cctggacgtc gagtggcacg tcgagctcga gcccggggga
    10921 gccggctgag gacatcaccg accggaccac ttcggcggct tcttcctcgc ggccttccgg
    10981 aacttcgaag accagttcgt cgtggacctg gaggagcatc ttcacgcctt cgaggcccgc
    11041 ctcggcgagc gcatcgtcca tccgcgccat cgcccgcttg atgaggtcgg cgctggtgcc
    11101 ctggatcggc gcgttgaccg ccgcccgctc ggcaccgccg cgatgggatg ggttgccggc
    11161 gcggatgttg gggaagtggg tcttccgacc gaacagggtg cgggtgaagc catgctcgcg
    11221 ggcgaattgc agcgtctgct cgatgtaggt tcggattccg gggaagcgct cgaaatagcg
    11281 gtcgatgatc gccttgcctt cgtccttcgg gatcccgagc cgtccagcga ggccccatga
    11341 cgagattccg tagaggatcg cgaaattgac cgtcttggcc ttgttgcggt tgtcgcggtc
    11401 agccgatccg aacagctctt cggcagtcat gttgtggatg tcggcgccgt cgcggaacgc
    11461 cgccttgagc tgcgggacgt cggccatgtg cgcggccagc ctcagttcga tctggctata
    11521 gtcggcgctc atcagcacat tgccgggctc ggcgacgaaa gcgtcgcgga tcttgcggcc
    11581 gatctcggtc cggatcggga tgttctgcaa attggggtca ttcgacgcca gccgtcccgt
    11641 ctgcgctccg gcaagcgaga agctggtgtg gacccgcccc gtctcggggt tgatttgcgc
    11701 ctgcagtgcg tccgtgtagg tcgacttgag cttcgacagc tgccgccact cgagcaccag
    11761 ccgcgcgcat tcgacgcctt cgccggcgag ccgttcgagc tcggtcacgt cggtcgaata
    11821 tttgccgctc ttgcccttgc gcccgccctt gagacctagc cgcccgtaga gcacctcgcc
    11881 gagctgctgc ggcgacccga tcgtgaacgg accgcaggca gcttcgtaaa tccgctcctc
    11941 cagcctgacg atttcctcgg cgaactcgcg gctgagcttg gcgagatagt cgcggtctac
    12001 ctttaccccg cggcgctcca tccggctgat caccggcacc agcggacggt cgacccgctc
    12061 atagactcgg gtgacgttct cgcttgcgat ccgaggcttc agccgctgcc acagccgaaa
    12121 cgtgatgtcg gcatcctcgg ccgcatattg ggtcgcctgc ggcagcggca ccttgtcgaa
    12181 ggtgatctgc ttggcgcccg tcccgcagac gcttttgaac gggatgcact catggtcgaa
    12241 atggagcttc gcaagctcgt ccattccgtg gccgtgaagc ccggcatcga ggtcgaagct
    12301 catgatcatc gtgtcgtcca cgggagcgac gtcgatcccg gccttgtcga acatcaccca
    12361 gtcatatttg aaattatggc cgatcttgag gaccgcgggg tcctccagca gcggcttaag
    12421 cttctcgatc acgacggcca ttggcagctg ttcgggggcg tccgaataga ggtcggcgcc
    12481 actgtgcccg accgggatgt agcaggcgcg gttgggcgcg gtggcgaggc tgatgcccgc
    12541 cagcctggcg ataatgcagt cgatgcagtc cgtctcggtg tcgattgcga cgacgccaag
    12601 cgccgaggct tcggcaatcc agcggtcgag cgccgcctcg tcggtgacgg tctcgtacgt
    12661 cgaccggtcg accgcgattg cctcgggctc gctggtgccg gcaggtgccg attcgatcga
    12721 cgctgctgcg aggttgagcc cgccgccgct gctgctccgc cccgaggtcg ggccgccgcc
    12781 gccgacaagt cggttgagga gcgacttgaa tccttgctcc tcgaggaact ccttgagcgg
    12841 ctcgggcggg attcccgtta gcgcaaggtc ctcgagcggc tgcggaagcg ccgcgtcgca
    12901 taccagctcg acgagcttgc gcgacagccg cgcattgtcg gcatgttcga tcagcgactg
    12961 cttaagcttg ggcttggtga tgctctcggc gctcgcgaga accgcttcca gcgaaccata
    13021 ttcgaggatc agctgtgaag cagtctttgg cccgatcccc ggcacgcccg ggatattgtc
    13081 gaccttgtcg cccatcagcg cgagcacgtc gccgagcgtt tccggaccaa caccaaactt
    13141 gttctcgaca taagcgcggt cgatccgccg gtcgttcatc gtgtcgagca tgtcgacctt
    13201 gccgtcctcg accagctgca tcagatcctt gtcggagcta actatggtaa ccttccaccc
    13261 cgcctgcttg gccgcggtga cgtagcaggc aatgatgtcg tcggcctcca gccccgcttc
    13321 ctcgatgcag gggatcgaaa aggcgcgggt ggcggtccgg atcagcggga attgcgggac
    13381 caggtcctcg ggcggcggcg gccggtgcgc cttgtactgg tcgtacatat cgttccggaa
    13441 cgtctgttcc gacgcgtcga ggatgacagc catgtgggtc ggcccgtcgg ccttgtttag
    13501 cccgtcggcg agcttccaca gcatggtcgt ataaccgtag accgcccccg ccggctggcc
    13561 gtgccggttg gtgagcggcg gcaggcggtg ataggcgcgg aagatgtagc tcgacccgtc
    13621 gacgagatag agatgattgc cgtctgccat tgaggcgcgg gtttagcagc ctccttacgg
    13681 gaatctactg agggccgctt ttgatctgaa tcaacgctgt gcggcggcgc cgccaatacc
    13741 cacggtgtca cgaaaggagt ttcgtgaatg accgctcatt acaaggaaat cctcgccgcc
    13801 cgcgccgaca tcgtcgcttc ccccgccccg cgggcgtgcg aggatcacag tttcgagatc
    13861 cccaccggca tctatgttgc gatggcgctt tgttttgcag gcgcaattgc agtcctggcc
    13921 ttcgcattcc gcagcgaaat ggccgtttcc tacgggatcg tgttcgcctt ccttgccgca
    13981 ttcttcgcga ttccggcaat cttcgtccgg tccgcacgcg gatcgaagcc gcttgattgg
    14041 tcggtgttcc gggagaaggg aatcatgacc gcgaccggcc gtaccggcgg cggcgaagca
    14101 gcaatgctcg tgctcttgct ccccttccta atcctttgct gggcaatcgc agtcgcaacc
    14161 atcgccgcgc tcgtctgagc ggtcagcgcg gcgacacgcg ggctcgggca tgtggagtgc
    14221 ccgggcctgc gaccatttct tcagcaggcc gacagcaagc catgctagga gagtgccgga
    14281 gtattttggg agcgaagccg atggtaagcc gaaagctgat gagaatcctc gcgccgatgg
    14341 cgtttctcgc catgtcgcag ggcgcggccg cggcgaccct ggtggtgacg aagagcattt
    14401 cgtgcacctg ctgcgagggc tgggtcgacc atatgcgcaa ggccgggttc gacgtcgaag
    14461 tccactcggt cgcagatgtg agccccacgg cgaagcgcct cggggtgccc gacaagctac
    14521 gctcatgcca tactgccaag attggcgatt acgtgatcga aggccacgta ccggctgcgg
    14581 acgttaagcg gttgctggcg caaaagccca aggctgccgg cctcgccgtc ccgggaatgg
    14641 ttgttggctc acccggcatg gaaacgggcg ccagggccga gccttacaag accctgctct
    14701 tcaccaagga cggcaagacc aaggtcttcg cttcccactg aacgcctagg gcaccagcac
    14761 cgtgtcagtc gccgccggct gcggctcggg atagtcgagc gtgtagtgaa ggccgcggct
    14821 ttcttgccgc gatagcgccg agcggatgat caggtcggcg acctcgacga ggttgcgaag
    14881 ctcgatgagg tcgggcgtta cccggaaatt cttgtaatag tcggtgacct cctggcggat
    14941 gaggtctatg cggcgcttgg cccgctcgag ccgcttggtg gttcggacga tcccgacgta
    15001 attccacatg aagcggcgga tctcgcccca gatctggtgg atcaccactt cttcgtcgct
    15061 gtcggttacg cggctttcgt cccaggcacg gatcttcggc acgtcgccca gcgagtccca
    15121 gctggcgagg atgtccttcg ccgcggcctc tccgaaaacg acgcattcca gaaggctgtt
    15181 ggaggccagc cggttggcgc cgtgaaggcc cgactgggtc acttccccgg cggcatagag
    15241 ccccggcgca tcggtacgcc cgcgcctgtc aacgagcact ccgccgcacg tgtaatgctg
    15301 cgcgggaacc accgggatcg gctcgctcgt catgtcgatc ccaagcgtga gcaacttctc
    15361 gtggatggtc gggaaatggc ttttcacgaa ctcggactcg cgatggctga tatcgagcca
    15421 gacgaagtcg aggccgtcgc gcttgatctc attgtcgatc gcccgggcga cgatatcgcg
    15481 gggggcgagc tcggcccgtt cgtcataatc gagcatgaat cggcggcggg tcctgggatt
    15541 gaccaacagc ccgccctcgc cccgcaccgc ctcggtgatc aggaaattct tgacctcgag
    15601 attgtacaga caggtcggat gaaactgcat gaattccatg ttcgaaacgc ggcagccggc
    15661 gcgccacgcc atcgcaatcc cgtcgcccgt ggcgccgcgc ggagcggtcg agaaaagata
    15721 ggcgcggcca gcgccgccgc tggcgaggat cgtagctcgc ccggtcaacg tctcgacccg
    15781 ctgcgtcttg cggttgtagg cgtaaaggcc gtggatactt ccgctcgtag aaaaatcgac
    15841 ggcgtggcgg ccggtcacga aatcgatcgc taccatgtcg ggcagcagag tgatgttcgg
    15901 ctgctttgcc gcggcccctt ccagcgcctg ctggacagct cgcccggttg cgtcggcgac
    15961 gtggacgatc cgccggtggc tgtgcccgcc ttcgcgggtc aggtggagcg cgccgccctc
    16021 ggtcgcaaac gggactccca gctcggcgag ccgggcgatg gccgctggcg cctccccgac
    16081 gacatattcg acgaccttgc gatcgttcag tccggcgccc gcgatcatcg tgtcgttgac
    16141 gtgcgcttcg aacgtgtcgc cttcctccag cacggcggcg attccgccct gcgcccaatt
    16201 cgttgctccc tcgccgaccg cgcccttggc gatcaccgcg accttctttt ccggcgcgag
    16261 gttgagcgcc gctgtcaggc cggcggcacc ggatcccacg atcaggacgt cgaagtccct
    16321 gctcattgct cggcgaccag gctcaggaac acgtcttcga ggtcggggtc gcgggtggaa
    16381 acgtcgacga tcccgagccc gccgtcggtg agggcggcga ggatctggcc ggcattcacc
    16441 ctgtccttgc gataggtgat ctccagggtc cgctcgtcga ccagcgcgat attgtcgaag
    16501 gcgtcattcg cgggaacgcg gtcgaggtcg cggtcgatag tgacgaccac cgccttctcc
    16561 tgcgccttgg cgacgagctc gcgggtcggc tcgttggcga tcatcttgcc atggttgatg
    16621 atcgcgatcc ggtcgcacag cttctcggct tcctcgagat agtgggtggt caagaccacc
    16681 gtgatgccct gcctgttgag cgatccgaca tagtcccaaa gctgccggcg aagctcgacg
    16741 tcgactcccg cggtcggttc gtcgagcacc aggatcggcg gcgagtggac cattgccttg
    16801 gcgaccagaa gccgccgttt catgcctccg gacaaggtgc gcgcataagc gttcgccttg
    16861 tcggtgaggt gcatcgcggc gagcagctcg tcgctccggc gctgagagcg cggaactccg
    16921 taaaggccgg cctggatttc aagggtctcc cggggcgtga agaaggggtc gaagataatt
    16981 tcctgcggga ccaccccaat cgcccgtttg gcattgcgcg gatgccggtc gatgtcgaag
    17041 ccccagattt ccgccgttcc gcccgacttc gttaccagcc cggcaaggat gttgatcagg
    17101 gtagacttgc cggcgccgtt cgggcccagc aggccgaaaa tctcaccgcg cgggacgtcg
    17161 aagctgaccc cgtcgagcgc cagcttgccg ccctcataga ctttcgagag cgagtcgatt
    17221 cggattgcgg gctcggcgct gctcatcgcg agccgcatag ccgccagtcc ccgcctacgg
    17281 aagcgcgccg gaagtaaagc cagccttaac cgtaacggga agggcggcct tgacactcgc
    17341 gaagtaaatg ccggtccgta tggtccgctt gctgctttcc ttctcgctcg cgctggcgct
    17401 gatggtgtcg gcgccggcgc ccgtgcgcgc ggcaacgccc gccaccgatg cgacggcgac
    17461 cgcgatcgtg ctccgcccgc tgaccttgct gaagctccgg aatctcgatt tcggcgggct
    17521 cctctcctcg gcgactgcgg ggacggccat cctcgacccc tcgaccggcg ccgtgaccac
    17581 gaccgggggc gtcgttgccg cttcgggacc gaccatgtcc gcgcgattta tgggcgcggg
    17641 aacccgaaag acccctgtca tcgtccggat cccgaagaat ccggtcacac tgacgcgggt
    17701 gggcggcaca gagacaatga ccgtttcgaa ctggacgatg gacggatcga cgacccggat
    17761 catccaggaa aacgagacct tcgaattccg agtcggcggc cgtctcaacg tcgccgccaa
    17821 tcagatgcaa ggaacctacg tcgggacttt cgacgtgacc gcccaatatc cgtgagccag
    17881 gtgatcgccg ccgcttgtcg cggcactgtc accaccctaa gtggcgaagc aggatgacca
    17941 cgctaccgcc gcccgaagtg tacaaggtgt cgaccacgaa ggtcgcttgc gacggctcgg
    18001 gcgcggtctc gcccgagctg gggcatccgc ggatctatct tcgcatcgac cccgcgatcg
    18061 gctttgtcga atgcggctat tgcgaccgcc gcttcattct cgagggggga gttgcggaca
    18121 ccggcccgaa gtgaacccgc gccagctcct ctaccgaagt ctcgaccccg atgacgcccg
    18181 caggctcgct gcccggcacc tgtcgtcttg cgacgacggc gagctgttcc tcgaacatag
    18241 cgtcagcgag gcgttcgggt tcgacgacgg caggttgaag accgcaagct acgacagcgc
    18301 ctcgggcttc gggcttcgcg gggtaaccgg cgagacgacc gccttcgccc acgccaacga
    18361 gatcagcgcc gacgcgatcg cccgcgccgc cgccacgctg acgctgctcg atcccgcgaa
    18421 gggcgccgcc gcgccgccgc cggcgcggac caaccaggcg atgtattcgc ccgacaaccc
    18481 cctcaccgaa gtcccgttcg ccgacaaggt ggcgctgtgc cagcagattg acgccgcggc
    18541 ccgcgctcgc gacccgcgag tcgcccaggt cagcgtcggc ctgaccgcca gctggcgggt
    18601 gatcgaggtg attcgcgccg atggtttcgt cgcttccgac gtccgcccgc tggttcggct
    18661 cggggttcag atcgtcgccg ccgacggcgg ccgccgggaa accggccact tcgggcttgg
    18721 cggccggcat ctttacgaac gcctgttcga cccggcgacg tggaaccgag ccatcgacga
    18781 ggctctcgcc caggcgctaa ccaacctgca gtcggtcgcc gcccccgccg gagaaatgcc
    18841 agtcgtgctc ggcccgggct ggtgcggagt gcttctccac gaagcggtcg gccacgggct
    18901 cgagggcgac ttcaaccgca agggcacctc ggcattcagt ggccggattg ggcagcgcgt
    18961 cgctgcacct ggcgtgacgg tagtcgacga cggcgccatc gagcagagac gcggctcgct
    19021 gaccatcgac gacgaaggca cgccgacccg ccgcaacgtc ctgatcgagg acgggatcct
    19081 caagggctat ttgcaggacc ggctgaatgc tcggctgatg ggaatggagc cgaccggcag
    19141 cggccgccgc gaaagcttcg cccacgcgcc gatgccgagg atgaccaata cgttcatgct
    19201 tgccggcaat gacaatcccg gcgagctcgt cgaacgggtc aaggacggcg tttatgcgaa
    19261 gagcttcggc ggcggccagg tcgacatcac cagcggcaag ttcgtctttt cctgcacaga
    19321 ggcgtaccga atccgcggcg gcaagctcgc cgagccggtg aagggcgcga ccctaatcgg
    19381 cgacggcccg agcgtactca cccggatcaa ggggatcggc aacgacttcg cactcgacga
    19441 aggcgtgggc gtctgcggca agggcggcca gtcggtcccg gccggggtcg ggcagccgtc
    19501 gctgctcatc gacggcctca cagtcggtgg gaccggctga tgaccgactg gcgcggccgg
    19561 gttctggatt tctggttcgg cctcgaaaag cagcaatggt ggcgcggacc gcccgagctc
    19621 gatgaacagg ttcgggatcg attcctcgac ctgtggaagg agaagcgcca gcttcccgcc
    19681 gactcctttc tcgccgatgc cccgacagcg atcgccgcag tcatcctgtt tgaccagttt
    19741 ccccgaaaca tattccgcgg ccacgcggag caattcgcga ccgaccccct tgcgctggcc
    19801 atcgccaagg gcgcgatcga gcgcgacctc gacgagcaga tggacgagga gcagcgaagc
    19861 ttcctctaca tgcccttcca gcacagcgaa gacctggacg accagaaccg ggcggtgctc
    19921 ctgttcaccc agctcggcga cgaagagcag ctcgactatg cgaagaagca tcgcgacgtc
    19981 atcgcccgct tcggccgttt cccccaccgc aacgcaatgc tcggacgggc gcctcgcgaa
    20041 gacgaagttg cggccggcga cgtcgtcccc tggtgagcgg cctcgccgag ctcgcccgct
    20101 tcccgacccg ggttgacgcc gatcttgccc ggctgaggct ggaagccgcg ggaatcggcg
    20161 ccgtcctgtt tgacgagggc atgaattata tcggcctggg gccggcgatg ccggtgcggt
    20221 tgatggttct cgaagaggat gtcgaagaag ccgcccggct t
//
LOCUS       DATAKH010000196         2370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_22833,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000196 DATAKH010000000
VERSION     DATAKH010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22833"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VHN55_08170"
     CDS             complement(<1..797)
                     /locus_tag="VHN55_08170"
                     /inference="COORDINATES: protein motif:HMM:NF023204.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RcnB family protein"
                     /protein_id="HEX2803938.1"
                     /translation="MRKFLLSLVLATTAAAPALAAPPKDKDDKRSVKVEERSEAPKPQ
                     ARSRARPERSQAREERTQRTEPRAERALTERVRPSDSSRDRSRFEQRREASGDRDTQA
                     RERANANRRGRPTLNQGRQSTDSVANWRERERSGSSERWRDRRSADIRRQTPPAEARP
                     DRPAPLPQTAQHRERRPEWRSSWRNDHRYDWRNHRRHNRSLFRLGIYFDPFGWNYRRY
                     NIGWRLWPSYYSSNYWLNDPYTYRLPYAPWPYKWVRYYDDALLVDTTT"
     gene            933..1712
                     /locus_tag="VHN55_08175"
     CDS             933..1712
                     /locus_tag="VHN55_08175"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2803939.1"
                     /translation="MTFLATALGGIGFAEKGSGGVPVLFLHGVGSDKSVWSQQLAHFG
                     ASRRAVAIDYPGYGESDPASEGTTRDDYAAAILTAMDSLGIDSAHVCGLSLGGVVAIA
                     MHALAADRCESLILADTFASHPDGRGIYDRSVAASGDLRAMAEARVDVLLAQPVDPKV
                     RTEVVETMARIDAQAYRIGADAVWLADQRDRAAAIDVPALVICGAEDKVTPPELSREL
                     VELIPGARYEEIGRAGHLTNLEQPDQFNRIVEEFLAQVESG"
     gene            complement(1737..>2370)
                     /locus_tag="VHN55_08180"
     CDS             complement(1737..>2370)
                     /locus_tag="VHN55_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803940.1"
                     /translation="IFRPVSLFYVVISMTRGIQYGVLVGATPLVAINFAGWAQEHVSA
                     ISGTGQLIGGIIGMTVGGMLGDRLGAKRATILIYSCWLALNVTMIAAQPLWANSQFMT
                     AFIITWLALDVLVSVATIPIAMRLCNRTVAATQFTLYMALHNFGITVGAWLLGLADTL
                     GGIAPLFGLLAMANIVAIAIMVWVRFPTRQIDEATADQLPQGDGLVPAVD"
BASE COUNT          383 a          780 c          804 g          403 t
ORIGIN      
        1 gtggtcgtgt cgaccagcag cgcgtcgtcg tagtagcgga cccatttgta cggccacggc
       61 gcgtagggaa gccggtacgt gtacgggtcg ttgagccagt agttggagct gtaatagctc
      121 ggccacaggc gccagccgat attgtagcgg cggtagttcc agccgaacgg gtcgaaatag
      181 attcccaggc ggaacagcga ccggttatgc cggcggtggt tgcgccagtc gtagcggtgg
      241 tcgttgcgcc agctcgagcg ccattccggg cggcgctcgc gatgctgcgc ggtctgcggc
      301 agcggcgctg gccggtcggg acgggcctcc gctggcgggg tctggcgccg gatgtcggcc
      361 gatcggcggt cacgccagcg ctcgctcgag ccggagcgct cgcgctcgcg ccagttggcg
      421 acgctgtccg tcgactgccg cccctgattc aaggtgggcc gtccacgcct gttggcgttg
      481 gcgcgctccc gggcctgggt gtcgcggtcg cccgacgctt ctcgacgctg ctcgaaccgt
      541 gagcggtcgc ggctggagtc gctcggccga acgcgctcgg tcagcgctcg ctccgcccgc
      601 ggttcggtgc gctgcgtccg ttcctcacga gcctgggacc gctcggggcg ggcccggctc
      661 cgggcctgcg gcttgggagc ttcggagcgc tcctccacct tgacggatcg cttgtcgtcc
      721 ttgtctttcg gcggagccgc cagcgccgga gctgcagcgg tcgtggcaag gacaagggag
      781 agaaggaatt tacgcatcgt acacctcgga aacatggcga gtcattgaag cccatttgac
      841 actctccaga tgagccgttg cttaaccgtt atgttccccg ccgttcagcc gaagcgcttg
      901 caaagacgaa gctccgcgga catcccggcc gggtgacttt tctggcaaca gcgctgggcg
      961 gtatcggctt cgccgagaaa ggcagcggcg gggtccctgt cctgttcctg cacggcgttg
     1021 ggtccgacaa gtcggtatgg tctcagcagc tcgcccactt cggcgccagc cgccgggcgg
     1081 tcgccatcga ctatcccggc tatggcgaaa gcgatcccgc ttccgaggga acgacacgcg
     1141 acgattatgc ggccgcgatc ctcacggcga tggactcgct cgggatcgac agcgcgcacg
     1201 tctgcggcct gtcgcttggc ggggttgtcg caatcgcaat gcacgcactg gcggcagatc
     1261 gctgcgaatc gctgatcctg gccgacacgt tcgcgtccca ccccgatggc cgcggcatct
     1321 acgaccgctc ggtcgcggca agcggcgatc ttcgggcgat ggccgaagcg cgggtcgacg
     1381 tcctcctcgc ccaaccggtc gacccgaagg tccgaaccga ggtggtcgag acgatggcgc
     1441 ggatcgacgc gcaagcctat cgcatcggcg ccgatgctgt gtggctcgcc gaccagcgcg
     1501 accgggcggc tgcgatcgac gttccggcgc tggtcatctg cggggccgag gacaaggtca
     1561 ctccgccgga gctttcccgc gagctcgtcg agctgatccc cggcgcgcgc tatgaagaga
     1621 ttgggcgcgc cggacacctc accaatctcg agcagccgga ccagttcaac cgcatcgtcg
     1681 aggaattcct ggcgcaggtg gaaagcggct gatcgggcag cgccatccgc cgcgcgtcaa
     1741 tcgaccgccg gcaccagccc gtcgccctgc ggcaattgat ccgccgtcgc ttcgtcgatc
     1801 tgccgcgtcg ggaagcgcac ccagaccatg atcgcgatcg cgacgatatt ggccattgca
     1861 agcaggccga acagcggcgc gatcccgccg agggtatcgg caagcccgag cagccatgcg
     1921 cccacagtga tcccgaaatt gtggagcgcc atgtagagcg tgaactgggt cgctgccacc
     1981 gtccggttgc acagccgcat cgcgatcggg atggtggcga cggagacaag cacgtcgaga
     2041 gccagccagg tgatgatgaa cgccgtcatg aactgactgt tcgcccacag cggctgggcc
     2101 gcgatcatgg tcacgttgag cgccagccag caactgtaga tgaggatcgt cgcccgcttc
     2161 gcgccgagcc tgtcgccaag cattccgccg acggtcattc cgatgatccc gccgatcagc
     2221 tggccggtcc cgctgattgc cgagacgtgc tcctgcgccc agcccgcgaa attgatggcg
     2281 accagaggag tggcgccgac aagcacgcca tattggattc ccctggtcat cgaaatcacg
     2341 acgtagaaca ggcttaccgg gcggaagatc
//
LOCUS       DATAKH010000197         6912 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_5448,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000197 DATAKH010000000
VERSION     DATAKH010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6912
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5448"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VHN55_08185"
     CDS             complement(<1..283)
                     /locus_tag="VHN55_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019832184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX2803941.1"
                     /translation="MKKIEAVIKPFKLDDVKDALHEVGVSGITVTEVKGFGRQKGHTE
                     LYRGAEYVIDFLPKVKVEIVLPDELVEAAVEAIRKAAQTGRIGDGKIFVI"
     gene            418..1182
                     /locus_tag="VHN55_08190"
     CDS             418..1182
                     /locus_tag="VHN55_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008602984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HEX2803942.1"
                     /translation="MPNAILLAAGLGSRLLPLTADRPKCLIEVGGRTILEHQVDALRA
                     AGVAGITIVGGYRFDRLTEFVEDRWQDAERPELLFNPFFAISSSIGSVWAARHVLDRP
                     FCLLNGDTVYDPALVADGLERLEPGLNLFVEPLGSPAPDDMLVRIDNERIVAVGKELS
                     PLLAHHRSLGFVAWSGEGSEVYRKALESVIGEVEGPQAFHHAVVNRVAHDRPVHAVSF
                     QHGAWTEIDRPEDIVAWGGSLTKSAAAQLPRAAGDD"
     gene            complement(1156..2307)
                     /locus_tag="VHN55_08195"
     CDS             complement(1156..2307)
                     /locus_tag="VHN55_08195"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2803943.1"
                     /translation="MAAKSRQGRVMIFVHDLRASGVVRNTLAIARRVSEDHEVMLVAR
                     YGNGLLAEDAETGIHSVRTLFPAGRSGPLWSAALRLRSLVREWQPDVLLSTGNRGHWV
                     ARLALVGRKLPLRLFRISNSVEAGRKDFGLRRIASQLLSRGADTLFLVGEATGGSRAF
                     AEAIADGRAKSVPSGVDRERARKLAAAAAPADWPGDDLPAVLSIGRLAPQKDFPTLIR
                     AAAIAARQRPLRLVIVGKGDRTVIAGLRQLATAEGLDLRLPGESDNVFAWLGRSAVFV
                     LPSRWEGSSLALLEALAVDVPVVATREAGDSVQVLDDGRYGLLVDAGEAEAMADAILR
                     QLSPEQVRPGERAAHYDIEVTLERYAVGVDEAVARAAALRASVVAGSAG"
     gene            complement(2331..3161)
                     /gene="map"
                     /locus_tag="VHN55_08200"
     CDS             complement(2331..3161)
                     /gene="map"
                     /locus_tag="VHN55_08200"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006953022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEX2803944.1"
                     /translation="MTQYITVAADDRVEARNGVIKLHGPEGFEGMRRAGRLAAEILDA
                     LATHVVPGVTTGELDSIVYRMTTEGGGVPATLGYRGFTKSCCTSINHVVCHGIPGDRV
                     LKDGDVVNIDVTPIVDGWHGDTSRMFLVGDVPIKAKRLVDITYECLMLGLEQAKPGNR
                     MGDIANAIQSHAERHRYSVVRDFCGHGVGRLFHDSPEVIHAGRPGSGPELKPGMFFTV
                     EPMINIGRADVKLLEDGWTAVTRDRSLSAQFEHSIGITETGCEIFTKSPTGRDRPPYA
                     "
     gene            3226..3849
                     /locus_tag="VHN55_08205"
     CDS             3226..3849
                     /locus_tag="VHN55_08205"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEX2803945.1"
                     /translation="MHTLLLMALQLSSLGANPPIIIPPKAAEVAGPIGELLLAPVFRD
                     PFACTEHPFGQLPMAGDALGTDCEIVSGLDGERGFVRPFRTNGATNSDWYGWHAEVLS
                     PTDGTVAGIFEKENENIPGEMGKPPASMIQIMRDDGVLVTLAHITQARIKIGDRVTAG
                     QSIALVGNNGMARAPHIHIGAYRKATAEPLQIRWDLRAMAALQTDQR"
     gene            3863..4621
                     /locus_tag="VHN55_08210"
     CDS             3863..4621
                     /locus_tag="VHN55_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HEX2803946.1"
                     /translation="MPDTSRIWTAALVVIGDEILSGRTEDKNIAQVAQWLNGQGIRLS
                     EVRVVPDQESAIVTAVNAVRPDHDYVFTTGGIGPTHDDITVDSIAAAFGVPVVIHPEA
                     RRVLEDYYRDRPPGLTESRLRMARVPDGAELIPNPTSGAPGVRIGNVYILAGVPYIAK
                     AMLEALDGKLEGGRPMVSVTVRANAAESDVAELLKQVQDEHPGVSIGSYPFYREGGYG
                     ADFVVRSDDEALANRCANELRKRLKEADVKVVAE"
     gene            complement(4687..4760)
                     /locus_tag="VHN55_08215"
     tRNA            complement(4687..4760)
                     /locus_tag="VHN55_08215"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4726..4728),aa:Gly,seq:ccc)
     gene            4874..5320
                     /locus_tag="VHN55_08220"
     CDS             4874..5320
                     /locus_tag="VHN55_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008601161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX2803947.1"
                     /translation="MEELLFEINETARSLRRAFDQRAATLGVTRPQWRVLARLKREPG
                     LRQVELAERLDMEPITLCRIVDRLEEAGLVERKPDPSDRRAWLLELTEKAAPLVSQLR
                     SLAHDFAAEAMDGIEEPDLRKLQERLAAIRANIARSGKQGDRAVRA"
     gene            5317..6408
                     /locus_tag="VHN55_08225"
     CDS             5317..6408
                     /locus_tag="VHN55_08225"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX2803948.1"
                     /translation="MNEMKQETAERAADPAEVPEAAAEIAESARKREKANKSRMRIFA
                     MLIVPVLLVLGGAYLWITSGGSESTDNAQVKTDIVSVTAQVTGPVIAVAVKNGDHVNR
                     GDVLFRIDPAPFNVALEQAQAQLAAARLQTSQLRTQAAGTGADITGARANLQIMRNAL
                     DRQQQLLKKGFTTRADYEDALNEVRKAETELADAQARAANAHAAIAPGEQPSIAQAQA
                     AVDKAKLDLERTVVRAPMAGEIANADRLQVGTQIVSGVGALSVVHSDGAWVEANFKEK
                     QLAEMRPGQNATIEIDAFGGTKFEGHVESIGAGTGSEFSLLPAQNANGNWVKVSQRVP
                     VRIAFDGHPSKPMISGLSAYVTVDLDNGQ"
     gene            6488..>6912
                     /locus_tag="VHN55_08230"
     CDS             6488..>6912
                     /locus_tag="VHN55_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014076689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2803949.1"
                     /translation="MMAVLLQVLDTTIANVALPHMQASLGATPETINWVLTSYIVASA
                     IALPISGWLADRIGRRRLLLMSIVGFTTASVLCATATSLTEMVAFRAIQGVSGAFIVP
                     LAQATLFDINPREKHGQAMALFGGGVMIGPILGPVLGGWL"
BASE COUNT         1223 a         2224 c         2283 g         1182 t
ORIGIN      
        1 ggatcacgaa gatcttgccg tcgccgatgc ggccggtctg ggcggccttg cggatcgcct
       61 cgacggcagc ctcgaccagc tcgtccggga ggacgatctc gaccttcacc ttgggcagga
      121 agtcgatcac atattcggca ccgcgataca gctcggtatg gcctttctgc cggccgaagc
      181 ccttcacttc cgtcaccgtg atgccggaca ccccgacctc gtgaagcgcg tccttcacgt
      241 cgtcgagctt gaatggtttg atgacggctt cgatcttttt caattcggcg atcccggcgg
      301 ttggcggacc agaatgttca ataggagtgg gggcaggggt atcgcaagca gtgcggcgcc
      361 gccactcgac tgccgcagca ttgccacagt ttcgagcgaa gggcggtcgc catgacaatg
      421 cccaatgcca tcctgctcgc cgccgggctc ggctcgcggc tgcttccgct caccgcggat
      481 cggcccaagt gcctgatcga ggtcggcggg cgaacgatcc tggagcacca ggtcgacgcc
      541 ctgcgcgcgg ccggggttgc gggcatcacc atcgtcggcg gctatcgctt cgaccggctg
      601 accgagttcg tcgaggaccg ctggcaggat gccgagcggc cggagctgct gttcaatccc
      661 ttcttcgcga tctcgagcag catcggcagc gtgtgggccg cccggcatgt gctcgaccgt
      721 ccgttctgcc tgctcaacgg cgatacggtc tacgatccgg cgctggtggc cgacggcctg
      781 gagcgcctcg agcccggcct gaacctgttc gtggaaccgc tcggctcgcc cgcgcccgac
      841 gacatgctcg tccgaatcga taatgagcgg attgtcgccg tcggcaaaga gcttagcccg
      901 ctcctcgcgc atcatcggtc gctgggcttc gtcgcctggt ccggcgaggg atcggaagtt
      961 tatcgcaagg cgctcgaatc ggtgatcggg gaggtcgagg ggccgcaggc gttccaccat
     1021 gccgtggtca atcgggtcgc ccatgaccgc ccggtgcatg ccgtcagctt ccagcatggt
     1081 gcctggacag agatcgaccg gcccgaggac attgtcgcct ggggcggatc gctgacgaaa
     1141 tcggcggcgg cgcagctacc ccgcgctgcc ggcgacgact gaggcgcgaa gggccgcggc
     1201 ccgggcgaca gcttcgtcga cgccaaccgc atagcgctcc agcgtcacct caatgtcata
     1261 gtgcgccgcg cgttcgcccg gccgcacctg ctccggcgac agctggcgaa gaatcgcatc
     1321 cgccatcgcc tcggcttctc cggcgtcgac cagcaatccg taccggccat cgtccagcac
     1381 ctgcacggaa tcgcccgctt cgcgcgtagc gacgaccggc acatcgacgg ccagcgcttc
     1441 gagcagggca agcgacgagc cctcccagcg cgagggaagg acgaaaactg ccgagcgtcc
     1501 cagccaggcg aacacattgt cgctttcgcc cgggaggcgg aggtcgaggc cttcggcggt
     1561 ggcgagctga cgcaggccgg ctatgacggt tcgatcgccc ttgccgacaa tgacaagccg
     1621 aagcggccgt tgccgcgcag cgattgccgc ggcgcggata agggtcggaa agtccttctg
     1681 cggagcgagg cggcctatcg aaaggactgc cggaaggtca tctcccggcc agtccgccgg
     1741 agctgccgcc gcggcgagct tgcgcgcccg ctcgcgatcg actccgctgg gaacggactt
     1801 cgcccgtccg tccgcgattg cctcggcgaa tgcgcgcgac ccgccagtcg cttctccgac
     1861 caggaacagg gtatcggcgc ctcgtgagag aagttgagag gcgattctgc gcaggccgaa
     1921 gtccttcctg cccgcctcga cgctgttgct gatccggaac agccgaagcg gcagctttcg
     1981 gccgaccagc gcgagccgcg ccacccaatg gccgcgattg ccggtggaga gcagaacgtc
     2041 cggctgccat tcccgtacca gcgacctgag ccggagcgcg gcggaccaaa gcggtcccga
     2101 ccggcctgcg gggaagaggg tgcgcacgga gtggatgcca gtctcggcgt cttccgcaag
     2161 aagaccgttg ccgtatcgtg cgacgagcat cacttcgtga tcctcggaaa cgcgccgcgc
     2221 gatcgcaagc gtgttgcgaa ccacgccgct cgcccgcagg tcgtggacga agatcatcac
     2281 tcggccctgg cgcgacttgg cggccattgt gcgggacccc cgacgccggt tcaggcgtaa
     2341 ggcggcctgt ctcgcccggt cgggcttttg gtgaaaatct cgcagccggt ttcggtgatt
     2401 ccgatcgaat gctcgaactg cgccgaaagc gaccggtcgc gtgtgaccgc ggtccagccg
     2461 tcctcgagca gcttcacgtc cgcgcggccg atgttgatca tcggctcgac ggtgaagaac
     2521 attcccggct tgagctcggg gccgctgccg ggcctgccgg cgtggatcac ttccgggctg
     2581 tcgtggaaca gccgcccgac gccgtgcccg cagaagtccc ggacgacgct gtagcggtgc
     2641 cgttcggcgt ggctctgtat ggcattggcg atgtcgccca tccggttgcc gggcttcgcc
     2701 tgctcgagtc cgagcatcag gcattcgtag gtgatgtcga ctagccgttt cgccttgatc
     2761 ggcacgtcgc cgaccaggaa catccggcta gtatcgccgt gccagccgtc gacaatgggc
     2821 gtgacgtcga tattgacgac gtcgccgtcc ttgaggaccc ggtcgcctgg aattccgtga
     2881 caaacgacgt ggttgatcga ggtgcagcaa ctcttggtga agccgcggta gccgagcgtg
     2941 gccggaactc cgcctccctc tgtggtcatc cggtagacga tcgagtccag ctcacccgtg
     3001 gtgactcccg ggacgacatg ggtagcaagc gcgtcgagga tctcggccgc gagccggccg
     3061 gcgcggcgca tgccctcgaa tccctccggg ccatggagct tgatgacgcc gttgcgggcc
     3121 tcgacgcgat cgtcggcggc gacggtgata tattgagtca tggcgcctag ataggcattc
     3181 ggagccgata agtcaccgga ggcgagaggt gttccaggag cggctatgca tacactgctg
     3241 ttgatggcgt tgcagctttc atcgctcggc gccaaccccc cgatcattat cccgcctaag
     3301 gcggccgaag tggcggggcc gatcggcgag ctgttgctcg ctcccgtgtt tcgagatccc
     3361 tttgcctgca ccgagcaccc ctttgggcag ctccctatgg ccggcgatgc gctcggaacg
     3421 gactgcgaaa tcgtctccgg ccttgatggc gagaggggat ttgtgcggcc cttcaggaca
     3481 aacggcgcca ccaactccga ttggtacggc tggcatgccg aagtcctttc accgacagac
     3541 ggaacggtcg cagggatttt cgagaaggaa aacgagaaca taccaggcga aatgggcaag
     3601 ccacccgcga gcatgattca aatcatgcgc gacgacggag tgttggtgac tctcgcccat
     3661 attacgcagg ccaggatcaa gattggcgac cgcgtgacgg ccggccagtc gattgcgctc
     3721 gtcggtaaca acggcatggc aagggccccg cacatccaca tcggtgccta tcgcaaggcg
     3781 actgccgaac cattgcagat tcggtgggac cttcgagcga tggctgccct ccagaccgac
     3841 cagcgatagg agctgccgcg acttgcccga tacatccagg atatggactg ccgcgctcgt
     3901 cgttatcggc gacgaaattc tttccggccg caccgaggac aagaacattg cccaggtcgc
     3961 gcaatggctc aacgggcagg gcattcgcct ttcggaagtg cgcgtggtcc ccgaccagga
     4021 gagcgcgatc gtcaccgccg tgaacgcggt tcggccagat cacgactatg tcttcaccac
     4081 cggcgggatc ggcccgactc acgacgacat cacggtggat tcgatcgcag ccgccttcgg
     4141 ggtgccggtc gtaatccacc ctgaagctcg tcgagtgctg gaggactatt accgcgatcg
     4201 gccgcccggc ctcaccgaat cgcggctgag gatggcgcgg gtccccgacg gagcggagtt
     4261 gatccccaat cccacgtcag gtgctccggg ggttcgaatc ggcaatgtct atattctcgc
     4321 tggtgtgccc tacatcgcca aggcgatgct ggaggcgctc gacgggaagc tcgaaggcgg
     4381 ccgcccgatg gtgtcggtga cggtgcgcgc gaatgccgcc gaaagcgatg tcgccgagct
     4441 gctcaagcag gttcaggacg agcatccggg ggtctcgatc ggaagctatc cattctatcg
     4501 cgaaggcgga tacggcgccg acttcgtagt gcggtcggac gatgaggcgc tggcgaaccg
     4561 ctgcgcgaac gagcttcgga agcggctgaa ggaagccgat gtcaaggtgg tggcagaata
     4621 gctgtcgccc cgccgctttg cggcgtgcgc tccaatttcg aacctgcccc cggcaggtcg
     4681 caaaattgga gcgggtagcg ggaatcgaac ccgcgcgttc agcttgggaa gctgacaggc
     4741 taccactaca tcatacccgc gtggcgacgg cgaattaggt gctcgccagt taagcgtcaa
     4801 cgcgagtcct cgccggccag gagctctcac ctgctcgttg atttagtaag cgtgcttatt
     4861 atatgggcgc gcaatggaag agctgctatt cgaaatcaac gaaaccgcgc gctcgcttcg
     4921 ccgggctttc gaccagcgcg ccgcgaccct cggcgtaacc cggccgcagt ggcgggttct
     4981 cgcccggctc aagcgagagc cggggttgcg gcaggtcgag ttggccgagc ggctggacat
     5041 ggagccgatc accctgtgcc ggatcgtcga ccggctcgag gaggctggct tggtcgagcg
     5101 caagccggac ccttccgacc gccgggcctg gctgcttgag ctgaccgaga aggcggcacc
     5161 actggtcagc cagctgcgtt cgctcgcgca cgatttcgcc gccgaggcga tggacgggat
     5221 cgaggagccg gacctgagaa aattgcaaga acgccttgcc gcgatccggg ccaacattgc
     5281 ccgttccggc aagcagggcg acagggcggt gcgcgcatga acgagatgaa gcaagagacc
     5341 gccgagcgcg ccgccgaccc cgccgaagtc cccgaggccg cagcggagat cgcagagagc
     5401 gcgcgcaaac gcgagaaggc gaataagtcg cggatgcgca tctttgcgat gctcatcgtg
     5461 ccagtgctgc ttgttctcgg cggcgcatat ttgtggatta ccagcggagg ttcggaatcc
     5521 accgacaatg cccaggtcaa gaccgacatc gtttccgtga ccgcgcaggt gaccgggccg
     5581 gtgatcgcgg tcgctgtgaa gaacggcgac cacgttaatc gcggtgacgt gctgttccgg
     5641 atcgacccgg cgccgttcaa cgtggcgctc gagcaggcgc aggcacagct tgcggctgcg
     5701 aggctccaga cgagccagct acgaactcaa gctgccggca cgggcgccga catcaccggc
     5761 gctcgtgcca acctgcagat catgcgcaat gcgctcgacc gccagcagca gttgctcaag
     5821 aaggggttca cgacccgcgc cgactatgag gacgcgctca acgaggttcg aaaggcggaa
     5881 accgagcttg ccgacgcgca ggcccgcgcc gccaatgccc atgccgcgat tgcccccggg
     5941 gagcagccgt ccatagccca ggcgcaggct gcggtggaca aggccaagct agatctcgag
     6001 cggaccgtcg ttcgcgctcc gatggcaggc gaaatcgcaa atgccgaccg gctgcaggtc
     6061 ggaacccaga tcgtgtcggg cgtcggcgcc ttgtcagtcg tccacagcga cggtgcctgg
     6121 gtcgaggcga acttcaagga gaagcagctc gccgaaatgc gtcccggcca gaacgcgaca
     6181 atcgagatcg acgcgtttgg cgggacgaaa ttcgaaggcc atgtcgagag catcggcgct
     6241 ggcacaggca gcgagttttc gttgcttccc gctcagaacg ccaacggcaa ttgggtgaaa
     6301 gtcagccagc gcgtcccggt tcggatcgcg ttcgacggac atccgtcgaa gccgatgatc
     6361 tccggccttt cggcatacgt cacggtcgat ctcgacaacg gccaataggc gcgggcttgt
     6421 ggcgacggcg ctaaccgcca ctcatcccct gccgaagggg cagcgggtca tcgtcaccat
     6481 cggcgtgatg atggccgtgc ttctgcaggt cctggacact acgatcgcca atgtcgcgct
     6541 cccgcacatg caggcgagcc tcggtgccac tcccgagact atcaactggg tactgacgag
     6601 ctacatcgtc gcgtcggcga tcgcacttcc gatcagcggc tggcttgccg accggatcgg
     6661 gcgaaggcgg ctgctgctga tgtcgatcgt cggcttcacc actgcatcgg tgctgtgcgc
     6721 gacggcgaca tcgttgaccg aaatggtggc gttccgagcc atccagggcg tcagcggcgc
     6781 cttcatcgtt ccgcttgcac aggcgaccct gttcgacatc aacccgcgcg agaagcacgg
     6841 ccaggcgatg gcgctgttcg gtggcggggt catgatcgga ccgatccttg gccccgtgct
     6901 cggcggctgg ct
//
LOCUS       DATAKH010000198         2793 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26138,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000198 DATAKH010000000
VERSION     DATAKH010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2793
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26138"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..683
                     /locus_tag="VHN55_08235"
     CDS             <1..683
                     /locus_tag="VHN55_08235"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX2803950.1"
                     /translation="LATQAQAQALTAQKRAADAESAAQSAQLRALRYQVNPHFLFNTL
                     NSLSSLVMTGRNDRAEAMLLALSTFFRSSLSLDPAADISLAQEIDLQRLYLEIEKTRF
                     PDRLQVDIDVPEELQSARLPALILQPVVENAIKYGVSKTRHKILLQITGETLPDGRIA
                     ITVTNRLLNGGKIQLPAATHEGTGLGLANVSERLETRFGRKADCSYGPVPDGGYKVTL
                     TMPVQRDG"
     gene            676..1425
                     /locus_tag="VHN55_08240"
     CDS             676..1425
                     /locus_tag="VHN55_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEX2803951.1"
                     /translation="MAELAPLRVVIADDEPLAAERLEMLLGRISGATLVGTAGDGESA
                     VNLAQELSPDVLLLDIAMPDLDGIQVARALAIQRPRPAVVFVTAFDQFAVAAFEVAAV
                     DYLMKPVDPKRLHQALERARDYIDNRREPAAKEAETSEWIDEFWASDLSGLVRIAARD
                     IDRVSAERDYMRLHVGRRSWLIHHSMTALEEGLDPELFVRLHRSAIVRKDFITGFTRN
                     PSGRWIARLGDGSEQPVGRLYSDRVRAIARR"
     gene            complement(1422..2711)
                     /locus_tag="VHN55_08245"
     CDS             complement(1422..2711)
                     /locus_tag="VHN55_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEX2803952.1"
                     /translation="MSKQPKAAATAARAMRGSRAYIVLLALVLGLAAGAAMAPVGEEV
                     RGPALQASGLVGGLWLDALKMVVIPLIVALLIIGIAKGAQAVRAGRVAARSVAWFAGV
                     YAISATTGILLIALMLSLWALPESAASALSAGLAAIDPAAVESSVPESADFFRSIIPP
                     NVIAAAAEGNVMQLVVFSVLFAVAVSVIEAERRRTVVALFEGVADALLVVIGWVLWIA
                     PVGVFALSFTLGATAGGAAFAAVLPYIVLVAVLGLVVGALGYVIATLAGGIRLGAFAK
                     AMVGAQTIALTTQSSLASLPAMLASAQILGVRQQVADVTLPLAVALFRATGPAMNVGV
                     AYYVAHWLGLEPSFAQLATATVVAAVVSFGSVSLPGQISFLTSISPIALAMGVPIAPL
                     AILVAVENIPDIFRTVGNVTLDVAVTTAVDRSTAKDA"
     gene            complement(2708..>2793)
                     /locus_tag="VHN55_08250"
     CDS             complement(2708..>2793)
                     /locus_tag="VHN55_08250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004209888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX2803953.1"
                     /translation="DDHALGVFDPAIRGKTDRFVFRFRKPA"
BASE COUNT          556 a          942 c          865 g          430 t
ORIGIN      
        1 atctcgccac gcaggcgcag gcgcaggcgc tgacagcgca aaagcgcgcc gcggatgcgg
       61 aatcggcggc acagtcggcg cagctgagag cgcttcgcta ccaggtcaat ccgcacttcc
      121 tgttcaacac gctcaattcc ctttcgtcgc tggtaatgac cgggcgcaac gaccgcgccg
      181 aggcgatgct cctcgcgctc tccactttct tccgaagcag cctgtcgctc gatcccgccg
      241 ccgacatcag cctggcgcag gagatcgatt tgcagcggct ttatctcgaa atcgagaaga
      301 cccgctttcc cgaccgcctc caggtcgaca tcgacgtgcc ggaggaactc caatcggcgc
      361 gtctgccggc gttgatcctc caaccggttg tggagaatgc gatcaagtac ggcgtctcga
      421 aaacacgcca caagatcctg cttcagatca cgggcgaaac gctgcccgac ggacgcatcg
      481 caatcaccgt caccaaccga ttgctgaacg gcggcaagat ccaattgccc gccgcaacgc
      541 acgaagggac cggcctcggg ctcgcaaacg tcagcgagcg gctcgagacg cgcttcggcc
      601 gaaaagctga ctgcagctac gggcccgtgc cggatggcgg ctacaaggtg accttgacga
      661 tgccggtgca gcgcgatggc tgagctcgct ccgctgcggg tcgttatcgc cgacgacgaa
      721 ccgctcgcgg cagagcgatt ggaaatgctg ctcggccgga taagcggtgc aaccctcgtc
      781 ggcacggccg gcgacggcga gtcggccgtg aacctggcgc aggagctttc gccggacgtt
      841 ctcctgctcg acatcgcaat gccggacctc gatggaatcc aggtcgctcg cgccttggcc
      901 atccagaggc cgcgccccgc ggtcgtgttc gtcaccgcat tcgaccaatt cgcggtggct
      961 gctttcgagg ttgctgcggt cgattatttg atgaagccgg tagaccccaa gcggctccat
     1021 caagcgctcg aacgggcccg cgactacatc gacaatcgcc gcgagcctgc tgccaaggaa
     1081 gccgagactt ccgagtggat cgacgaattc tgggcctccg acctcagcgg cctggtccga
     1141 atcgccgctc gcgacatcga ccgcgtctcc gccgagcgcg actatatgcg gttgcatgtc
     1201 ggccgccgaa gctggctcat ccaccattcg atgaccgctc tcgaggaggg gctcgacccg
     1261 gaactgttcg tccggctcca ccgatcggcg attgtccgca aggacttcat caccggcttc
     1321 acccgcaacc cctccggtcg ctggatcgcg cggctcggcg acggcagcga gcagccggtc
     1381 ggccgactct attcggaccg ggtaagggcg atcgccaggc gctaggcgtc ctttgcggtg
     1441 gaccgatcca ccgcggtcgt gacagccacg tccagcgtca cgttgccgac cgtccggaag
     1501 atgtccggta tgttctcgac agcgacaagg atcgcgagcg gtgcgattgg cacgcccatg
     1561 gccagggcga tggggctgat cgaggtgagg aagctgattt gccctggcag gctgaccgaa
     1621 ccaaagctca caaccgccgc cacaaccgtt gccgtagcga gctgggcgaa gctgggctcc
     1681 aggcccagcc aatgtgcgac ataatatgcg acgccgacgt tcatggctgg cccggtcgcc
     1741 cggaacagcg ccaccgcaag cggaagcgtg acgtcggcga cttgctgcct gaccccgaga
     1801 atctgcgccg acgcaagcat cgccggcagc gaggccaggg aagattgtgt ggtaagagcg
     1861 attgtctgtg ccccgaccat cgccttcgcg aaggcgccaa gacgaatccc tccggcaaga
     1921 gtggcgataa catatcccaa agcgccgacc acgagcccga gcacagcaac cagcacgata
     1981 taggggagca cagccgcgaa cgccgctccg cctgcagtcg cgccaagagt gaaggacagc
     2041 gcgaacacgc caactggcgc aatccacaac acccatccga taacgacaag gagcgcatcc
     2101 gcgacacctt cgaacagggc gacgaccgtc cgccgacgct cagcctcgat gacgcttacg
     2161 gcaaccgcga acagcacgga gaagaccacg agctgcatca cgttgccctc tgctgccgca
     2221 gcgatcacgt tcggcggaat gatcgagcgg aagaaatctg cagattcggg aaccgagctt
     2281 tcaacagcgg ccggatcgat tgccgccagg cccgcactca atgcactggc ggctgactcg
     2341 ggcagcgccc aaaggctgag catcagcgcg atcaggagga tgccggtcgt cgccgagatt
     2401 gcgtaaacgc ctgcgaacca agcgacggat cgggctgcta ctcggccagc gcgtaccgct
     2461 tgcgcgcctt tggcgatgcc gatgatcaga agagccacga tgagcgggat cacgaccatc
     2521 ttgagcgcgt cgagccaaag gccgcccacc aggccacttg cctgtagcgc cgggccgcgt
     2581 acctcctcgc cgactggagc catggcggcc cccgctgcaa gcccgagaac caaggccaac
     2641 aggacaatat acgcccgtga gccgcgcatc gcccgcgccg ccgttgcggc ggccttcggc
     2701 tgcttgctca agcgggtttc cggaaacgga agacgaagcg gtcggtcttg ccgcggatcg
     2761 ccggatcaaa cacgcctagc gcgtggtcgt cgg
//
LOCUS       DATAKH010000199        15478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_32952,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000199 DATAKH010000000
VERSION     DATAKH010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 15478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15478
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32952"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1427
                     /locus_tag="VHN55_08255"
     CDS             <1..1427
                     /locus_tag="VHN55_08255"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX2803954.1"
                     /translation="SYTVSLLQPKVIRDMDLERHGLKVVLRKRDNFLPGDGDYLLSGR
                     GGLTRKEIKRLNHADAEGYDRYIAELEVVVRLLKKWLLRAPPNAGRTVSAIPKLLSLG
                     RDMAGLSLAETRTVHDFAVRSAGDILDRHFEGDLAKALFGFDGVVGNFASPYDSGTAY
                     VLLHHLFGEAAGVEGAWGHAIGGMGSITQAMARACREKGVDIVLNSPVEEIIVERGRA
                     AGVVAGSKAIRAGIVVAGVNPKLLFDRLVPDGAVDTDVAGRMHGWRCESATFRMNVAL
                     SELPKFTVLPKKGDHLTAGIIMAPSLGFMDVAYVDARANGWSKQPVIEMLIPSTLDTG
                     LAPKGRHVASLFCQHVRYDLGPGRSWDKEREQAADTIIATVDAHAPGFAKSVIGRQIH
                     SPLDLERRFGLIGGDIFHGKMGLDQLFSARPMIGAADYRMPVAGLYLCGSGAHPGGGV
                     TGAPGHNAAQAILADRRPWSRRRH"
     gene            1424..2623
                     /locus_tag="VHN55_08260"
     CDS             1424..2623
                     /locus_tag="VHN55_08260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX2803955.1"
                     /translation="MTAPLAGIRVLDLSRVLAGPWCTQLLADLGADVIKVERPGAGDD
                     TRHWGPPWHVRDGEKVAAYFLSANRGKRSAAIDFATDEGAELVRRLAGNADVVVENFK
                     AGGLRKFTLDAASLHEVNPRLVIASITGFGQDGPYADRAGYDYIIQAMGGLMSITGKP
                     DGEPGGEPMRVGVAVADLFTGMYTAVAILSALYRREKSGAGAHIDMALFDTQLAMLAN
                     QASNALVSGKDPPRQGNTHPNIVPYQPFEAADQRIIVAIGNDRQFARLADLCGHPEWA
                     GDERFATNGARVANRQQMVEAIEGCIRSRPAAEWLEKLEEAGIPAGPINSVGQALSDI
                     QAQHRAMVRMLAGTPVVGSPVRIDGNRADSDLPPPKLGEHSESVLEELGIAPEEIGRL
                     RRAGVVG"
     gene            complement(2627..3310)
                     /locus_tag="VHN55_08265"
     CDS             complement(2627..3310)
                     /locus_tag="VHN55_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803956.1"
                     /translation="MKTTQLWKIGAVAVALATSSASVATVLVVRAAGPSAKVYPPGKA
                     LPESAKIQLQPGDSVMLLNTSGSRTLRGPGTFAVAASGEGLAAAANRRGRVSAMRSSD
                     VPLNPSPWNLDVTQSGKLCVANPTKLTLWRPHKADAIKLTIKGGGGEQTLEWPAGTDT
                     IAWPASLPITSGAEYQLSQPENGDSARVMFVTLASPPSDTIGAAQSLIANGCDNQLDV
                     LVESAPTAD"
     gene            complement(3535..5430)
                     /locus_tag="VHN55_08270"
     CDS             complement(3535..5430)
                     /locus_tag="VHN55_08270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803957.1"
                     /translation="MTAQLAISGRLKPLRRRFKLPARVPPFKTNTYRVFTVIWVAALL
                     LAIFGPAMALYDRYTSPGDNSQLMLGSRAGFVVAPKDATKIRFTVGPDARAAGIRKGD
                     DIIAIYGLPMPAEMPVTERALADHADDPAYIAMGNLLFGTEALPFPLTVRSADGRIHD
                     VTVTTGEEHISGASSELGVSPKLLSFIDVVHVIFYPFLIWAAWILHRRNSRDAVSSIL
                     SLAILLMIGAEHPASNFLASIGVPRVAHVAIYDLGNVLLVAGILLFPHGNLSPRLVAL
                     VASAPLLMFLSGQAYQSFFLMLLLMAVLIQIRAMRTAESSDLKQQIRWALFGFSGYAV
                     FKAISYASDLFKYSTGSFAAQLGFELTAGLTFGLSMLVLQLGLLVALIRYRLYDAEAI
                     ISRTATAAILTFAIGGTFAAVMEGIITGAQFVYPDSEVSQTIAAMGGAVMAAVVIEPI
                     HRKTREWSERRFHKALLEIREELPELMRDTRGSATLDEFLEDVLARLVAGVLSVRGAV
                     VLDGQVRQTVNVAEADVLRWHTEHKPEEDQHVLDCMPEDHLFPLRLEVETSAGAFGWL
                     LIGPRPDGSIPGKDEQQALKKIAQTLGRSVRIVLSREEARQELMRMLEAHSERIDRIE
                     RQLKLQS"
     gene            complement(5449..6240)
                     /locus_tag="VHN55_08275"
     CDS             complement(5449..6240)
                     /locus_tag="VHN55_08275"
                     /inference="COORDINATES: protein motif:HMM:NF012730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HEX2803958.1"
                     /translation="MSLRSLRLRAYRQLEPTAWPRKGLSPTNWLLAVLIIIAVVNAVI
                     ETEPTISGGREMLFDNLEVTIASIFLVEYLGRIWTVVENPRFAGYRFPRLRYAMSPIA
                     IIDLAAILPAFFAFGGASSLILRFFRVFRMIRLAKLGRASRAWQTIREAIYERRYEFG
                     MVLGLVAVAVLISASMLYMAEADVQPEKFGSIPRALWWAIVTLTTIGYGDAYPVTTLG
                     KAMAAIIAITGVMLIALPTGIFAASFTEGIQRHRQRVDGDEAADA"
     gene            complement(6344..7072)
                     /locus_tag="VHN55_08280"
     CDS             complement(6344..7072)
                     /locus_tag="VHN55_08280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803959.1"
                     /translation="MTEVSDKVEKALARFDRVTRALDERDGAPRAAARRERQRLNSDL
                     KRRAARVGVWLLAISVATIVVGIITPIGMFGFLAAVTLAVGAAIALAFTPARPTAKAP
                     TADLPNGQMVQRFDSYLYRTRGALPAPARAQIDAISARLPSLKQSLDRVDTLDPKAQD
                     ARRLMSLHLPRLVDRYLNVPQEFRSETDSEGLTVDQRLVEGLAAARTAIEEISGDLAR
                     DDLAAMEAQGRFLKSRYGQQTIDS"
     gene            complement(7069..8265)
                     /locus_tag="VHN55_08285"
     CDS             complement(7069..8265)
                     /locus_tag="VHN55_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HEX2803960.1"
                     /translation="MAEDATKTATKLKLDAPEALQPIAPAEAAGLVPLKKDETSELDK
                     RVAQFVEELAKLDSNSPEFGKKVDQLTAMGRKEIAEAAGASNRFLDRPVKAIDKDSGI
                     GADLTELRRTVEALDPKGATKTRKFLGIIPFGNRVDRYFDKYRSSQTHISKILNSLGN
                     GKDELLMDNAAIDTERANLWKTMHKLEQMIHISKSLDKQLEDKANDLDATDPAKAKAI
                     RESALFYTRQRTTDLLTQMAVTVQGYLALDLVKKNNVELVKGVDRASTTTVAALRTAV
                     TVAQALTNQKLVLEQIGALNTTTAGMIDTTGEMLKSQTGAIHEQAASSMIPLETLQRA
                     FQNIYDTMDQIDRFKLEALENMKQTVTTLSSEVEKSKGYIARAQGVEKGRLEGSSSPL
                     TPIEAK"
     gene            8493..9719
                     /locus_tag="VHN55_08290"
     CDS             8493..9719
                     /locus_tag="VHN55_08290"
                     /inference="COORDINATES: protein motif:HMM:NF024792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tad domain-containing protein"
                     /protein_id="HEX2803961.1"
                     /translation="MIKYLKKLWKDRRGNAIVIVGAALPIVVGAAGLGTDTVQWVLWK
                     RELQRAADTAALAGVYAELQTASVPSAVSAHLADNNHTGVALLSGYPAITYPADTGNF
                     TDAVRVELRIQKRLGFSSLFLANAPVITAAATAALIDDGNFCVVALNNSSASSITIGG
                     STNISMGCGAISNSTSTDSSVGINGGAYNFVADPVAGAGGMPATINGATNIQPHHVPM
                     QDPFADKFSTDITGMTCNKMVNAGATSLTPGCYKSFQFTGNKTYTLAAGVYYLDSTDF
                     DVQGTVTITGTGVTIILTGDDPGDVKTNGNSGIQLVAPTSGAYADMLLIGMGDGSNTI
                     NGNAGSFYDGGMYFPNGTVDFTGSSGTMTQCAMVVANFVNFSGNSNLQNSLTHPDGTP
                     CQADSQVEAKAVRLIA"
     gene            9716..10183
                     /locus_tag="VHN55_08295"
     CDS             9716..10183
                     /locus_tag="VHN55_08295"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX2803962.1"
                     /translation="MTCRPSSIWRDERGNSFIEMALAAPLLTALLIGTVDISRAVSAK
                     VQLEQVSQSTVERVQSQGTFKTDEIEDLEEYAEGLAGDGSEATVTAWLECNHDGTKLD
                     YDSASCGAGVPYARYVQATVASTYSPMFGTKYFPGANADGTVSVRGSATVRTQ"
     gene            10183..10593
                     /locus_tag="VHN55_08300"
     CDS             10183..10593
                     /locus_tag="VHN55_08300"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE family protein"
                     /protein_id="HEX2803963.1"
                     /translation="MTWTRIFRDRKGSAAIEFAIAVPVLVSFIVGIIQTSVYLQANAG
                     VQHALGEGARVATIYDPTTGSRPPDEVISETIVNSKFGIRGGDWHEPVIDSTNEASDG
                     YIDITVQYDVPTDFFFFPGPAITLQRTKRVFTQA"
     gene            complement(10584..11348)
                     /locus_tag="VHN55_08305"
     CDS             complement(10584..11348)
                     /locus_tag="VHN55_08305"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX2803964.1"
                     /translation="MTEHIRIERSGEVLAITLSRPERRNAITVAMYSALADAIEGAAD
                     DGSVRLITIRGEGADFTAGNDLYDFLQALPRESEDIPVWRLLRALARNQVPILAAVQG
                     NAVGIGTTMLLHCDLVIAASSARFSLPFVELGLVPEAASSLLLPRLAGRRRAARYLLL
                     GEPFGAQEALEAGLASHVVEDDDLAGALADIVAGLLAKPREALRLTQKLLRQGSTDEI
                     LERMQLENGHFSERLQSAEVREAIASFFERKGAGQA"
     gene            11432..12082
                     /gene="fsa"
                     /locus_tag="VHN55_08310"
     CDS             11432..12082
                     /gene="fsa"
                     /locus_tag="VHN55_08310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007682661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEX2803965.1"
                     /translation="MKFFADTAEISEIRELAATGLLDGVTTNPSLVQKSGRDFMEVLG
                     EIVAVCSGPVSAEVVSLDYDGMIREAEKLRKVADNIAIKVPLTEDGLKACRRLTEDGT
                     MVNVTLCFSAAQALLAAKAGATFISPFVGRHDDVGFSGMELISDIRLIYDNYDFETQI
                     LVASVRNPMHVVEAAKIGADVMTAPPKIIHQLFKHPLTDAGIAAFLHDWQATGQQI"
     gene            12133..12699
                     /locus_tag="VHN55_08315"
     CDS             12133..12699
                     /locus_tag="VHN55_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HEX2803966.1"
                     /translation="MAQVISFEETAVARLRERLGAAEEANQDLIAFARGQSDAVLSIN
                     AAVLAAIEAPSIHSLFDVITGQWPAILGIDFVAVAMIVGDRGFRADCNSLERVEAALV
                     ERMVQGLPKVEVRSVPSGHPLFGAPANRKVRAEALIRIDGPPPFPRGLLVLGQTGELA
                     ADSSHGSSLLLFLGQVVAATVRRCVATA"
     gene            12787..13113
                     /locus_tag="VHN55_08320"
     CDS             12787..13113
                     /locus_tag="VHN55_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HEX2803967.1"
                     /translation="MSQFDDRERAYEAKFAHDEEMNFRIIARRNRLVGEWAARKMGLS
                     EEETASYAKDVVRADFEEAGDDDVVRKLLGDLTSAGIEVDEAQIREALGHKMIEARRQ
                     VIQEQS"
     gene            13117..13362
                     /locus_tag="VHN55_08325"
     CDS             13117..13362
                     /locus_tag="VHN55_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEX2803968.1"
                     /translation="MAMTASEIENLIKSGIPDAEVTIMDLAGDGDHYSARIVSRSFAG
                     LTRVQQHQRVYAAMGGRVGGQLHALQLQTAAPEGDEQ"
     gene            13359..13676
                     /gene="grxD"
                     /locus_tag="VHN55_08330"
     CDS             13359..13676
                     /gene="grxD"
                     /locus_tag="VHN55_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008065664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEX2803969.1"
                     /translation="MTSARDRIDEIVRSNEIVLFMKGTELFPQCGFSSRAVSILEHLG
                     VPFKTVDVLQDPDIRTGIKEFSDWPTIPQLYVKGQFVGGSDIMMEMFESGELQQLVSA
                     PAS"
     gene            13924..15159
                     /locus_tag="VHN55_08335"
     CDS             13924..15159
                     /locus_tag="VHN55_08335"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2803970.1"
                     /translation="MSDASSRLFCDVTQSWSDVGGGVGTYLRRKRDYLLSRTGHRHLL
                     IVPGAEDSVIEKGRAITVTVASPPVPTSPKYRLLLRNSAVRSALEQFRPDVIECQDAY
                     NLPWAVLGYRRRHPHTATVAGYFTDFPTAYVHRPLSRFVGKAIAGQVRSLAYRYCGFL
                     YRRFDAVYALSENGGASKLRELGVSEVELVPLGVELDEFSPRNRDPALRRSLGIADDI
                     PFLIYVGRLDQERRVQVVLDAFDKLPRSLGARLALVGDGPVRGAILESGDHRVVAPGY
                     LKDRSELAKWLASADIYVSAMADETFGVSVIEAQASGLPVVGVAAGAMLDRVDDETGR
                     LGDPEDSDAMAANIVDVWRSDRAAMGEAARAHVEESRFSWDRSFQILFGEVYPSAIRA
                     RRSALSDLGTAAVARSTAS"
     gene            15224..>15478
                     /locus_tag="VHN55_08340"
     CDS             15224..>15478
                     /locus_tag="VHN55_08340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803971.1"
                     /translation="MTRLALFSIAALLATAAAAQEPPVPPAADPAHFDLANEKEKEKV
                     VDCAGEKFVFAWGAGAHPTKVTLCGEKGATTDQLVRMIGEA"
BASE COUNT         2822 a         4867 c         4950 g         2839 t
ORIGIN      
        1 cgagctacac ggtcagcctg ctgcagccca aagtcatccg cgacatggac ttggagcggc
       61 acgggctaaa ggtcgttctc aggaagcgcg acaatttcct gcccggcgac ggtgactatc
      121 tgctcagcgg tcgcggcggc cttacgcgca aggagatcaa gcggctcaat catgccgacg
      181 ccgagggcta cgaccgctac atcgccgagc tggaagtggt cgtccggctg ctcaagaaat
      241 ggctgctccg ggcgcctcca aacgccggtc ggacggtcag cgccataccc aagcttctca
      301 gcctggggag ggacatggcc gggctgtcgc tcgccgaaac gcgcacggtg cacgatttcg
      361 cggtccgaag cgccggcgac atcctcgacc gccatttcga gggcgacctc gccaaagccc
      421 tgttcgggtt cgacggagtc gtcgggaatt tcgcgtctcc gtacgattca ggtacagcct
      481 atgtcctcct ccatcaccta tttggtgagg cagcaggagt agagggcgcc tggggccatg
      541 cgatcggcgg aatgggctcg ataacgcagg cgatggctcg ggcgtgtcgc gagaagggag
      601 tcgacatcgt cctcaactcg ccggtcgagg agatcatcgt cgagcgcggc cgggcggcgg
      661 gcgtcgtcgc cggaagcaag gcgattcggg cgggaatcgt cgttgctgga gtgaatccga
      721 agctgctgtt cgaccggctt gttcccgacg gcgcggtcga cacggacgtc gccggccgga
      781 tgcacggctg gagatgcgaa agcgcgacct tccggatgaa cgtcgcgctg tcggagcttc
      841 ccaagtttac tgtccttccg aagaagggcg atcacctgac cgccgggatc atcatggcgc
      901 cgagcctcgg ctttatggac gtagcgtacg tagacgcgcg cgcgaacggc tggtccaaac
      961 agccggtgat cgagatgctg atcccgtcca cgctcgacac aggtcttgcg cccaagggca
     1021 ggcatgtcgc ctcgctcttc tgtcagcatg tccgttatga cctcggaccg gggcgaagct
     1081 gggacaagga acgggagcag gcggccgaca cgatcattgc cacggtcgat gcccatgcgc
     1141 cgggcttcgc caagtccgtg atcggccgcc agatccactc gccgctcgac ctcgagcgcc
     1201 gcttcgggtt gatcggcggt gatatcttcc atggcaagat ggggctggac cagctgttca
     1261 gcgccaggcc gatgatcggc gccgccgatt accggatgcc ggtggcaggc ctctatcttt
     1321 gcgggtcggg cgcgcatccc ggcggcggag tgacgggagc tcctggccat aacgccgccc
     1381 aggcgatcct cgccgaccgc aggccatggt cgaggcgaag gcattgaccg cgccgctcgc
     1441 cggaatccgg gtcctcgacc tcagccgggt gctggcgggg ccctggtgca cgcaattgct
     1501 cgccgacctc ggcgccgacg tgatcaaggt agagcggcca ggcgccggtg acgacacccg
     1561 ccactggggc ccgccctggc acgttcgcga cggcgagaag gtggccgctt atttcctttc
     1621 ggccaaccgg ggtaagcgct cggcggcgat cgatttcgcc accgacgagg gtgccgagct
     1681 ggtccgccgc cttgccggca atgccgatgt cgtggtcgaa aatttcaagg ccggcgggct
     1741 gcgcaagttc acgctcgacg cggcctcgct ccacgaggtc aatccgcgac tggtgatcgc
     1801 ctcgatcacc ggcttcggcc aggacgggcc ctacgccgac cgcgccggat acgattacat
     1861 catccaggcg atgggcgggc tgatgagcat taccggcaag cccgacggcg agccgggcgg
     1921 cgagccgatg cgggtcgggg tcgccgtcgc cgacttgttc accggaatgt acaccgcggt
     1981 cgctatcctc tccgccctct accgccgcga gaaatcgggc gcgggcgccc acatcgacat
     2041 ggcgctgttc gatacgcaat tggcaatgct cgccaaccag gcgtcgaatg cgcttgtgtc
     2101 gggcaaggac ccgcctcggc agggcaacac gcatcccaat atcgtcccct atcagccgtt
     2161 cgaagcggcc gaccagcgca tcatcgtcgc aatcggcaac gaccggcagt ttgcccgcct
     2221 cgcagacttg tgcggccatc cggagtgggc cggggacgag cggttcgcga ccaacggcgc
     2281 gagagtcgcc aaccgtcagc agatggtcga ggcgatagaa ggctgcatcc gctccaggcc
     2341 tgccgcggaa tggctcgaga agctcgagga agcaggaatt cccgccggtc cgatcaacag
     2401 cgtcggccag gccctgtccg atatccaggc gcagcaccgg gcgatggtcc ggatgctcgc
     2461 cggaacgccg gtagtgggct cgccggtcag gatcgacggg aaccgcgccg attcagacct
     2521 gccgccgcca aagctgggcg agcacagcga gagcgtgctc gaggaactcg gaatcgctcc
     2581 cgaggaaatc ggtcgcctga ggcgggcggg agtcgtcggc tagccgtcag tcggcggttg
     2641 gcgccgactc gacgagcacg tccagctggt tgtcgcaacc gttcgcaatc agcgattggg
     2701 ctgccccaat cgtatcgctg ggcggactgg ccagggtgac gaacatcacg cgagcgctgt
     2761 ctccgttctc gggctggctc agctgatatt cggctccgct cgtaatcggc agcgatgcgg
     2821 gccaagcgat cgtgtcggtg ccggcgggcc actcgagcgt ctgctcgccg ccgccgccct
     2881 tgatggtcag cttgattgcg tcagccttat ggggtcgcca gagcgtcaat ttggtcggat
     2941 tcgctacgca cagcttgcca ctttgcgtca catcgagatt ccacgggctc gggtttagcg
     3001 gaacgtcgct gctccgcatg gcgctgacgc gtccacggcg attggcggca gcggcgagac
     3061 cttcgcccga agccgcgacc gcgaaggtgc ccggaccgcg aagcgtgcgc gagccgctgg
     3121 tattcaggag catgacgctg tcgcccggct gaagctggat cttcgcactc tcggggagcg
     3181 ccttgcccgg cgggtagacc ttggcagacg gccctgccgc acgaacaacc agtaccgttg
     3241 ccaccgaagc cgacgaggtg gcgagagcga ctgcgaccgc cccaatcttc cacagctgag
     3301 tagtcttcat tccccggttc ctcctcaacg tttcagatgc ggtgcgcttc caccgctaac
     3361 actttctgtc ttttccaagc atcacgcgga agcgagtgga ttcttcacgg ggcgcttcga
     3421 tcatactccg gcactacgac atcgaaagcg actcaccgaa tggcgctaaa gtattggcgc
     3481 cggcgggaca ggtcaacgaa atggataatt gctcgcagtg agcgagtagt gaattcagga
     3541 ttgcagtttc agctggcgtt cgatgcgatc gattcgctcg ctgtgcgctt cgagcattcg
     3601 catcaattcc tgccgtgcct cttcgcggct aaggacgatt cttaccgagc ggccgagcgt
     3661 ctgggcgatc ttcttgagcg cctgttgctc gtccttgcca ggaatgctgc cgtccgggcg
     3721 cggaccgatg agaagccagc cgaacgcccc ggcgcttgtc tcgacctcca ggcggagcgg
     3781 gaagaggtgg tcttcgggca tgcagtcgag gacgtgctgg tcctcctccg gcttgtgctc
     3841 ggtgtgccag cgaaggacat cggcttcggc gacattcacc gtttgccgca cctggccgtc
     3901 cagtacgaca gcgccgcgaa ccgagagcac ccccgccaca agccgggcca agacatcttc
     3961 caggaattcg tccagcgttg ccgaacctcg tgtgtcgcgc atcagctcgg gcagttcctc
     4021 gcgaatctcg agaagcgcct tgtggaagcg gcgttcgctc cattcgcggg tcttgcggtg
     4081 tatcggttcg atgacgaccg cggccatcac ggctccgccc atcgcagcga tcgtctggct
     4141 gacctcgctg tccggataga cgaactgggc accggtgatg atgccctcca tcaccgcagc
     4201 gaaggttccg ccgatcgcga acgtcaggat tgctgccgtc gcggtccggc tgatgatcgc
     4261 ctcggcgtcg tagaggcggt agcggatcag cgcgaccaga agccccagct ggagcacgag
     4321 catggacagg ccgaaggtca gccccgcagt gagctcgaac cccaattggg cggcgaaact
     4381 gccggtcgaa tatttgaaca ggtcggacgc gtaggaaatc gccttgaaaa ccgcataacc
     4441 gctgaatccg aagagggccc agcggatctg ctgcttgagg tcgctggact cggcggttct
     4501 catggccctg atctggatga gcacggccat gaggaggagc atgaggaaga acgactggta
     4561 ggcctgtcct gaaaggaaca tcagcagcgg cgccgaggca accagtgcga ccagcctcgg
     4621 cgatagattg ccgtgcggga acagcaggat tcccgcgacc aggagcacgt tgccgaggtc
     4681 gtagatggcg acatgcgcta cgcgcggcac gccgatgctg gcgaggaagt tcgatgccgg
     4741 atgctcggcc ccgatcatca gcaggatggc gagcgaaaga atggagctca ccgcgtcccg
     4801 cgaattgcgc cggtggagga tccacgccgc ccagatcagg aacgggtaaa agatgacgtg
     4861 aacaacatcg atgaaggaga ggagcttcgg agacacgccc agctcgctcg atgccccgct
     4921 gatatgctct tcacccgtcg tgacggtgac gtcgtggatt cgtccgtcgg cggagcggac
     4981 cgtcagcggg aaaggtagag cctcggtgcc gaagagcagg tttcccatcg cgatgtaggc
     5041 gggatcgtcg gcatggtcgg caagcgcccg ttccgtcacc ggcatctccg ccggcatcgg
     5101 cagtccatag attgcgataa tgtcgtcgcc cttgcggatt cccgctgccc tggcgtccgg
     5161 accgacggta aagcggatct tcgttgcgtc tttcggtgca acgacgaacc cggcgcgact
     5221 tcccagcatg agctgcgaat tgtcgcccgg cgaagtgtag cggtcgtaca gtgccatagc
     5281 cggcccgaag atcgctagca ggagagcggc aacccagatg acggtgaaaa ctcgataggt
     5341 gttcgtcttg aagggcggca cgcgagcggg aagcttgaac cgccggcgga gcggcttgag
     5401 ccttccgctg atggccagtt gcgccgtcac gcccgcctcg tcagggcttc aggcatcggc
     5461 cgcttcgtcg ccgtcgacgc gctggcggtg gcgctggatt ccctcggtga atgacgccgc
     5521 gaatatgccg gtcgggagcg cgatgagcat tactccggtg atggcgatga tcgcggccat
     5581 ggcttttccg agcgtggtga ccggataggc gtccccatag ccgatcgtgg tgagcgtcac
     5641 gatggcccac cacagcgctc gcggaatgct tccgaacttc tccggctgta cgtcagcctc
     5701 ggccatgtag agcatcgagg cggagatcag caccgcgacc gcgacgaggc caagcaccat
     5761 gccgaactcg tagcgccgct cgtatatcgc ttcccggatc gtctgccagg cacgagatgc
     5821 gcgcccaagt tttgcaagac ggatcatccg gaagacccgg aaaaatcgga ggatcaggct
     5881 cgatgcgccc ccgaaagcga aaaatgctgg gagaatcgcc gcgaggtcga tgatcgcaat
     5941 cggactcatc gcatagcgca agcgcgggaa acgatagccg gcaaaacgcg gattttcgac
     6001 cacggtccag atgcggccaa gatattccac caggaagatg ctggcgatcg tgacctcgag
     6061 attgtcaaac agcatctccc ggccaccaga gatcgtcggt tcggtttcga tgaccgcatt
     6121 gacgacagcg atgatgatca ggacggcgag aagccagttg gtcggggaaa gcccctttcg
     6181 cggccaggcg gtcggctcca gttgccgata ggcgcgcaat cgaagcgaac gcaacgacat
     6241 gcttctctca ccccctatag cccgttcccg gacaagggac tgcccctgcc ggccactggc
     6301 tgcaagcttt tcctgaattt acgcagcgcg ttgccgcgcc tgctcagctg tcgatcgtct
     6361 gctggccgta gcgggatttg aggaagcggc cctgtgcctc catggcagcg agatcgtcgc
     6421 gcgcgagatc gccggaaatc tcctcgatcg cggtgcgcgc ggcggcgagc ccctcaacga
     6481 gcctctggtc gactgtcagg ccttcgctgt cggtctcgct cctgaattcc tggggaacgt
     6541 tgagatagcg gtcgacgagt ctggggaggt gaagcgacat tagcctgcgc gcatcctgcg
     6601 cctttggatc gagagtatcg accctgtcga gcgactgctt aagcgaggga aggcgggcgc
     6661 tgatggcatc gatttgggca cgcgcaggtg cgggcagggc gcccctcgtc cgatagaggt
     6721 aggaatcgaa gcgctgcacc atctgcccgt tcgggaggtc cgccgtcggc gcctttgccg
     6781 tgggccgggc cggcgtgaaa gcgagagcaa ttgctgcacc gaccgcgagc gttacggcgg
     6841 caaggaatcc gaacatcccg atcggcgtga tgattccgac gacgatcgtc gccaccgaaa
     6901 tcgccagcag ccaaacgccg actcgcgcgg ccctgcgctt gaggtcggaa ttgagccgct
     6961 ggcgctcgcg cctagccgcg gctcttggcg ctccgtcgcg ctcgtcgagt gctctcgtga
     7021 cccggtcgaa gcgcgctagc gccttttcga ctttatcgga aacttcggtc acttagcctc
     7081 gatcggtgtc agcggagacg agctgccttc cagccgcccc ttctcgacgc cctgggcgcg
     7141 ggcgatatag cctttcgact tttcgacctc gctcgaaagc gtcgtcacgg tctgcttcat
     7201 gttctcgagc gcctccagct tgaagcggtc gatctggtcc atcgtgtcgt agatgttctg
     7261 gaacgcgcgc tggagcgtct caagcggaat catcgatgac gccgcctgct catggatcgc
     7321 tccggtctgg ctcttcagca tctcgccggt ggtgtcgatc attcccgcgg tggttgtgtt
     7381 gagggcaccg atctgctcga gaactagctt ctgattggtc agcgcctggg caacggtaac
     7441 cgcggtccgg agtgccgcca cggtcgtcgt cgaggcgcga tccacgcctt tgaccagctc
     7501 tacattgttc ttcttgacga ggtcgagcgc gagatagccc tgcaccgtca ctgccatctg
     7561 ggtcagcagg tccgtggtcc gctggcgagt gtagaacagc gcgctctccc ggatcgcctt
     7621 ggcctttgcg ggatcggtgg cgtcgaggtc gttggccttg tcctcgagct gcttgtccag
     7681 gctcttggag atgtggatca tctgctcgag cttgtgcatc gtcttccaca agttggcgcg
     7741 ctcggtgtcg atcgccgcat tgtccatcag cagctcgtcc ttgccgttgc cgaggctgtt
     7801 gaggatcttg gagatgtggg tctgcgagct tcgatacttg tcgaaatagc ggtcgacacg
     7861 gttgccgaac gggatgatgc cgaggaactt gcgggtcttc gtcgcgccct tcggatcaag
     7921 cgcttccacc gtccggcgaa gttcggtcag gtctgctccg atccccgaat ccttgtcgat
     7981 cgccttaaca ggacggtcga gaaagcggtt cgaagcgcct gcggcctcgg caatttcctt
     8041 gcggcccatc gcagtcagct gatcgacctt cttgccaaat tcggggctgt tggaatcgag
     8101 cttcgcaagc tcctcgacga attgcgccac gcgcttgtcg agctcgctcg tttcgtcctt
     8161 cttcagcggg accagccccg ccgcttccgc aggagcgatc ggctgaagcg cctcgggcgc
     8221 atccagcttg agcttggtcg ctgtcttggt ggcgtcctcg gccataatcg tctgcccttc
     8281 tttctgcctg caagcttcac gtcgacattc gacgccagac cgcaagcatg caagcgggtt
     8341 caactgtatt ataggtgtaa gacgccgtag tgcaagcgag ggcgagcctt cacgcgcaac
     8401 acctcgttaa ccaaaaaatg caacggtttg ctcacctcga cgcgggatag accgtaccca
     8461 aagcgtatac atcggcgcgg gggcaggtgc acatgatcaa atacctgaag aagctgtgga
     8521 aggaccgccg cggcaacgcc atcgtaatcg taggcgcagc cctcccgatc gtcgtcggcg
     8581 cggcaggact tggaaccgat acggtgcaat gggtcctgtg gaagcgcgag cttcagcgcg
     8641 ccgcggacac ggcggctctc gcgggcgtct atgccgaact gcagaccgcc tcggtgccga
     8701 gcgcggtcag tgcgcatctc gccgacaaca accacacggg agtcgccctc ttgagcggct
     8761 atcccgcaat cacctatcct gcagacacgg gcaatttcac ggacgccgta agggtcgagc
     8821 tccggattca gaagagactt ggattttcct cgcttttcct tgcgaacgcg ccagtcatca
     8881 ccgcagcggc caccgccgca ttgatcgacg acggcaattt ctgcgtcgtc gctctcaaca
     8941 attcgagcgc ctcttcgatc acgatcggcg gcagcaccaa catcagtatg ggctgcgggg
     9001 ccatttccaa ctccacgtcg acggattcct ccgttggaat taacggcggc gcctacaatt
     9061 tcgtggccga tccggtggcc ggggccggcg gcatgccggc cacgatcaac ggcgcgacga
     9121 acatccagcc gcatcacgtg ccgatgcagg accccttcgc ggacaaattt tcgaccgaca
     9181 tcaccggaat gacctgcaac aagatggtca acgccggcgc gaccagcctc acgcctggct
     9241 gctacaagtc gttccagttc accggcaata aaacctacac cctggctgct ggggtctatt
     9301 acctcgacag cacggacttc gacgtccagg gcactgtgac aattacgggt acgggcgtca
     9361 ccatcatcct taccggcgat gacccgggcg acgtcaagac gaacggcaat tccgggatcc
     9421 agctcgttgc cccgaccagc ggcgcctatg cggacatgct gttgattggg atgggcgacg
     9481 ggtcgaacac gatcaacgga aacgccggct cgttctacga cggtggaatg tatttcccaa
     9541 acgggacggt cgacttcacc ggcagcagcg gaacaatgac gcagtgcgcg atggtcgttg
     9601 ccaatttcgt taatttcagc ggcaactcca atctgcagaa cagcctcacc caccccgatg
     9661 gcactccgtg ccaggccgac tcgcaggtcg aggcgaaggc agtgaggctg atcgcatgac
     9721 gtgccggcct tcttccatct ggcgcgacga gcgcggcaat tccttcatcg agatggcgct
     9781 tgccgcccct ctcctgactg cgctcctaat cggaaccgtc gacatcagcc gcgcggtatc
     9841 cgcgaaggtg cagctggagc aggtatcgca aagcacggtc gaaagagtgc agtcgcaggg
     9901 gaccttcaag accgacgaga tcgaagatct cgaggagtat gccgagggcc tggccggtga
     9961 cgggtcggag gccaccgtca ccgcttggct cgagtgcaac catgacggaa ccaagctcga
    10021 ttatgacagt gcaagttgtg gggccggtgt cccttatgcc cgctatgtgc aagccaccgt
    10081 cgcgagcacc tattcgccga tgttcggcac caaatatttc ccgggcgcga acgccgatgg
    10141 gaccgttagc gtcaggggca gtgcaacggt gcggacgcaa tgatgacctg gacccgcatt
    10201 ttccgtgatc gaaagggctc cgcagcgatc gaattcgcga ttgcagttcc ggtgctcgtg
    10261 tccttcattg tcggcatcat ccagacgtct gtttaccttc aggcgaatgc cggcgtacag
    10321 cacgcgctgg gcgaaggcgc tcgggtagcg accatttacg acccgacaac gggaagccgc
    10381 ccacccgacg aggttatcag cgagacgatc gtaaactcca agttcgggat ccgcggcggc
    10441 gattggcatg agccggtaat tgacagcacc aacgaagctt cggacggtta catcgacatc
    10501 accgtgcaat atgatgtgcc gacggatttc ttcttcttcc caggaccggc gatcacgctc
    10561 cagcggacga agcgcgtttt cactcaggcc tgaccggcgc ctttgcgctc aaagaaggag
    10621 gcgatcgcct ccctgacctc ggccgactgg agccgttcgg agaaatggcc gttctcgagc
    10681 tgcatccgct cgagaatttc gtccgtggat ccctgccgaa gcagcttctg ggtcaggcgt
    10741 agcgcctctc ggggcttggc gagcaggccg gcgacgatgt ccgcaagagc gccggcaagg
    10801 tcatcgtcct cgaccacgtg gctcgccagc cccgcctcga gtgcttcctg cgctccgaac
    10861 ggctcgccca gcaataggta gcgtgccgct cgcctgcgcc ccgccaggcg cggcaggagc
    10921 agcgagcttg cggcctccgg aaccagcccg agttcgacga acggcagaga gaatcgcgcg
    10981 ctgctggctg cgatgaccaa atcgcagtgg agcagcatag tcgtcccgat tccgacggca
    11041 ttgccttgca cggcggcgag gatcggcacc tggttgcggg caagcgcccg aagcagccgc
    11101 cacaccggga tatcctcaga ctccctcgga agcgcctgaa ggaaatcgta gaggtcgttg
    11161 ccggcggtga agtccgcacc ttcgccgcgg atggtgatca ggcgaaccga gccgtcgtcg
    11221 gccgcgccct cgatcgcgtc cgccagtgcc gaatacatgg cgacggtgat cgcgttgcgg
    11281 cgctcgggac gcgaaagcgt gatcgcgagc acctcgccgc tccgctcgat ccttatgtgc
    11341 tcggtcatca tttcgccccc gaatcggcca actcgccgga tgactgtttg tgtcgcagcg
    11401 gctatccctc ggcaatgatc cggggagagc catgaagttt tttgccgaca ccgccgaaat
    11461 ttccgaaatc cgcgagctcg ccgccaccgg ccttctcgat ggggtgacga ccaatccgtc
    11521 tctcgtccag aaatccggcc gcgacttcat ggaggtgctt ggcgaaatcg tcgccgtctg
    11581 cagcgggccg gtttcggcgg aggtcgtttc tctcgactat gacgggatga tccgcgaggc
    11641 ggagaagctg cgcaaggtcg cggacaatat cgccataaag gtgccgctca cggaggacgg
    11701 tctgaaggcc tgccgaaggc tcaccgagga tgggacgatg gtcaacgtca ccttgtgctt
    11761 ctcggccgcg caggcgcttc ttgcggccaa ggccggagcg acctttatct ccccgttcgt
    11821 tgggcgacac gacgatgtcg gtttcagcgg catggaactg atctccgata tccggctcat
    11881 ctacgataat tacgatttcg agacccagat cctggtcgcg tccgttcgca acccgatgca
    11941 tgtcgtcgaa gccgccaaga tcggcgccga cgtgatgact gcgccgccca agatcatcca
    12001 tcagctgttc aagcaccccc tgacggatgc cggcatcgct gctttccttc acgactggca
    12061 ggcgaccggc cagcagatct gaagctgccc gcagccaccg gaaattaacg gctttgcgct
    12121 aggcgccgag ctgtggcgca ggtgatttca ttcgaggaaa cggcagttgc ccggcttcgc
    12181 gagcggctgg gcgccgccga agaggccaac caggacctga tcgccttcgc gcgcgggcag
    12241 tcggacgcgg tgctttcaat caatgccgcg gtcctcgccg caatcgaggc gccgtcgatc
    12301 cactcgctgt tcgacgtgat cactgggcag tggccggcga tcctcggaat cgacttcgtc
    12361 gcagtcgcaa tgattgtcgg cgaccgggga tttcgcgccg actgcaattc gctcgagcgg
    12421 gtcgaagccg ccctcgtcga gcgaatggtc caaggcctgc cgaaggtcga ggtccgcagc
    12481 gtcccgagcg ggcacccgct tttcggcgcg ccggcgaacc gaaaggtgcg cgcggaggcg
    12541 ttgatccgga tcgacgggcc gcccccgttc ccgcgcggcc tgctcgtgct cggccaaacg
    12601 ggcgagcttg cagccgacag cagccacggc tcgagcctcc tgctgttcct cggccaggtc
    12661 gtcgccgcga cagtccgccg ctgtgtcgcg accgcctgag ccagcttagc cgccatcgcc
    12721 caaacgccgc tggacgtagt ttgcccgcgc ccttatctcg caggccaaac agcggaaggc
    12781 atgtgaatga gccagttcga cgatcgcgag cgcgcctacg aggccaagtt cgcccacgat
    12841 gaagagatga atttccggat catcgcacgg cgcaaccggc tcgtcggtga gtgggcagcg
    12901 cgcaagatgg gcctgtcgga ggaagagact gcgtcctacg cgaaggacgt tgtccgcgcc
    12961 gatttcgagg aggccgggga tgacgatgtc gtgcggaagc tgctgggtga ccttacctcg
    13021 gctggaatcg aagtggatga ggcgcagatt cgggaggcgc tcggccacaa gatgatcgag
    13081 gcccgccgcc aggtgattca ggagcaatcc tgaccgatgg cgatgaccgc gagcgaaatc
    13141 gagaatctca tcaagtcagg tattcccgac gccgaagtca cgattatgga cctggccggc
    13201 gacggcgatc attattcagc gcgaatcgtc agccgcagct ttgcagggct cacgcgcgtt
    13261 caacagcacc agcgggttta tgccgcgatg ggcggccgcg tcggcggaca attgcacgcc
    13321 ctgcagcttc aaaccgcggc gccggaggga gatgagcagt gaccagcgca agagaccgga
    13381 tcgacgagat cgttcgcagc aacgagatcg tcttgttcat gaaggggacc gagctgtttc
    13441 cgcagtgcgg tttctcgagc cgcgcggtgt cgatcctcga gcatctgggg gttccgttca
    13501 agacggtcga cgtcctccag gatcccgaca tccgcacagg catcaaggag tttagcgact
    13561 ggccgacgat tccccagctc tacgtaaaag gccagttcgt cggcgggtcc gacatcatga
    13621 tggaaatgtt cgagagcggc gagctgcagc agcttgtgag cgctccagcg agctgatcgc
    13681 caaaatatga aggggcggcg gcgcgggacc agagatccgc gccgccgccc ctttggtggt
    13741 ctgtggaacc aagtggacgc tactttctaa gcaacgggcg tgccaaatga ttgaaaccgc
    13801 agttttccgg gaattattga taatggattt cgtagccgcc gcgggtgagt gtaaatcttt
    13861 ccgacgcttt ttgcctgaaa tcgtcgcttg gcactttgtc cctcggagcg ggttggagcg
    13921 ctcatgagcg acgcgtcttc acgccttttc tgcgatgtga cgcaaagctg gtccgatgtc
    13981 ggtggcggcg tcggcaccta tttgcgccgc aagcgcgatt acctcctttc gcgcactggg
    14041 caccggcacc tgctcatcgt ccccggggct gaggatagcg tcatcgagaa aggcagggcg
    14101 attaccgtga ccgtggcatc gccgccggtg ccgaccagcc ccaagtaccg cctgctgctg
    14161 cgcaattccg cggttcgctc ggccctcgag cagttcaggc ccgacgtgat cgagtgccag
    14221 gacgcctaca atcttccctg ggcggtcctg ggatatcgca ggcggcaccc gcacactgcc
    14281 acggtcgccg gctacttcac cgactttccg accgcctacg tacaccgccc cctcagccgc
    14341 ttcgtcggca aggcgatcgc cggccaggtc cgctcgctcg cctatcgcta ttgcgggttc
    14401 ctctatcgcc gcttcgacgc ggtctatgcg cttagtgaga acgggggggc atcgaagctc
    14461 cgcgaactcg gagtgtcgga ggtagagcta gttccgctcg gagttgagct cgacgaattc
    14521 agtccgcgca atcgcgaccc ggcgctcagg cgatcgctgg gaatcgcgga cgatattccg
    14581 ttcctgatct acgtcggccg gctcgaccag gaacggaggg tccaggtcgt cctcgacgcg
    14641 ttcgacaagc ttccgcgatc gctcggagcc cgactcgcgc tggtcggcga cggaccggtc
    14701 cgcggcgcaa tcctggaatc cggcgatcac cgagtcgtcg cgcccggcta cctgaaggat
    14761 cgttccgagc tcgcgaaatg gcttgcgagc gcggatatct acgtgtctgc gatggccgac
    14821 gagacattcg gagtgtcggt gatcgaggcg caggcttcgg gacttccggt ggtcggtgtt
    14881 gctgcaggcg caatgctcga ccgggtcgac gacgagacgg ggcgtctcgg cgatccggaa
    14941 gattccgacg cgatggccgc caatatcgtc gacgtctggc gttccgaccg ggcagcaatg
    15001 ggcgaggccg cgcgggcgca tgtggaggag agccggttca gctgggaccg gtcgttccag
    15061 atactgttcg gggaggtcta cccaagcgcc attcgcgcgc gccgctctgc gcttagcgat
    15121 ctcggaacgg cggccgttgc ccgaagcacc gcctcctgac gcgcgttcat cgctggtgca
    15181 gcctgacgcg ccgacagatg tgcatcgcaa tgaggatcaa gccatgaccc gccttgcact
    15241 gttttcgatt gccgctctgc ttgccaccgc cgccgcggcg caggagccgc cggtgcctcc
    15301 cgccgcggac cccgcccatt ttgacctcgc caacgaaaag gagaaggaga aggtcgtcga
    15361 ctgcgccggc gagaagttcg tcttcgcctg gggcgcgggc gcacatccga ccaaggtgac
    15421 cttgtgcggc gaaaaaggcg ccaccaccga ccagcttgtg cggatgatcg gggaagcc
//
LOCUS       DATAKH010000200         4708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_28733,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000200 DATAKH010000000
VERSION     DATAKH010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4708
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28733"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1157)
                     /locus_tag="VHN55_08345"
     CDS             complement(<1..1157)
                     /locus_tag="VHN55_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX2803972.1"
                     /translation="MTKIAEEAEPAARPAGHVPQQASVAGLTLLALGVVFGDIGTSPL
                     YAMRETFAGAHPLPITRVQVYGVISLIFWSMMLVVGIKYITILTRADNKGEGGSLALL
                     ALISRKANIRRSTGIVLLGVFACALFYGDSMITPAISVLSAVEGLTVVQSSLQPAVIP
                     IAIAILVGLFMLQRTGTARVGALFGPVVTTYFATIAVLGATSIARHPEILWALNPYYA
                     INFFIIDKWLGFLALGSVVLAVTGTEALYTDMGHFGRRPIRNGWWMFVMPALMMNYMG
                     QGALLIADPSAVSSPFFLLAPEWFRFPLVLIATMATIIASQAVISGAFSVTQQAMQLG
                     FIPRLKITHTSARAAGQIYIPSVNTALMVMVILLVLVFQNSSNLAAAYGVAV"
     gene            1314..2429
                     /gene="ald"
                     /locus_tag="VHN55_08350"
     CDS             1314..2429
                     /gene="ald"
                     /locus_tag="VHN55_08350"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010185973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEX2803973.1"
                     /translation="MRIGVPREIKNNEFRVGLTPGSVADIVAAGHELFVETNAGDGID
                     CPDSAFKNAGATILGSEAEVFAASDMIVKVKEPQPEEIALLEPRHILFTYLHLAADRP
                     QTLGLMESGATCIAYETVTANNGSLPLLKPMSEVAGRMSVQVGAHYLEKEQGGRGVLL
                     GGVPGVGPAKVAILGGGVAGVNAAQMAVGMRADVTIYDINMERLAELDMFFSSKIKTA
                     YASRATIARAVEKSELVIGAVLVPGAAAPKLVTRDMLSTMKRGSVLVDIAIDQGGCFE
                     TSHATTHADPVYEVDGIIHYCVANMPGAVARTSAFALNNVTLPFVLKIAKLGAEEAMR
                     RDPHLANGLNVSGGKIRHQAVAEALDLPYEPALGLEH"
     gene            complement(2426..3082)
                     /locus_tag="VHN55_08355"
     CDS             complement(2426..3082)
                     /locus_tag="VHN55_08355"
                     /inference="COORDINATES: protein motif:HMM:NF024820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2803974.1"
                     /translation="MAGAKPAAAEGEKLSGWIMLAMVTAAAAAMLRLLGLRGSMLQLG
                     TAALFFGCAGYALQGRPGLPGSERAAGREDPPVPLANVRHAFFGNFSSTEHWLLMSES
                     LASRGKTEQAVGVLRAAVGEHPRDAQLWLGLGNALVDHAGVLTPASDLAYRRAAELAP
                     GHPAPLFFMGLALARSGDGDGAVALWKELLASAPADAPWRPMVEDAVAALQPKAPPKP
                     "
     gene            complement(3040..3450)
                     /locus_tag="VHN55_08360"
     CDS             complement(3040..3450)
                     /locus_tag="VHN55_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HEX2803975.1"
                     /translation="MKRLAICVALAIAAPALADSSLPPAHWADRQLPDARQEARARAL
                     MEEIRCLVCQGQSIADSDAELAGDMRDLVRRRIAAGEDPSEVRSWLIQRYGAWITYRP
                     PAEPITWPLWLAPIALLVGGAWLARSRLRRRAKN"
     gene            complement(3447..3971)
                     /locus_tag="VHN55_08365"
     CDS             complement(3447..3971)
                     /locus_tag="VHN55_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HEX2803976.1"
                     /translation="MRWLRFVPVAVIVMLVAVLVWRLASPPDAEIQSQMVGKPIPEFA
                     AAAAVAGTPTLSSADLADGNPRLVNIFASWCVPCIAEAPVLTELKRRGVTIVGIAVRD
                     RPEDVAEFLAEHGNPFERIGSDPQSSLQLAFGSAGVPESFVVDGRGVIRMQHIGPIEP
                     DEIPAIVAAVESAK"
     gene            complement(3968..>4708)
                     /locus_tag="VHN55_08370"
     CDS             complement(3968..>4708)
                     /locus_tag="VHN55_08370"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HEX2803977.1"
                     /translation="DSVAGPLALLLAVLVGVGPLLRWRRDSGERLKRLAIPGLAGVTA
                     AVIAFIVIPGGGLLSKVGVGVAAMLAIAAFLPLAGRKLRRTPLSTWGMVVAHFGVAVG
                     IAGMAVSTMATTEVLTAARPGDRIAVGPWMIEFQAVTPAAGSNWTAIEAELRASRGSG
                     VSVLKPQARFYSNPPTETTEAAIDTVLSGQLYTVLGKPAEDGRWQLRLWWKPLVTLIW
                     LGGALIALGGALALGGRAWRGWRKEREA"
BASE COUNT          907 a         1588 c         1507 g          706 t
ORIGIN      
        1 accgccactc cgtaggccgc cgccaggttg ctcgagttct ggaagacaag gaccagcagg
       61 atgaccatga ccatcagcgc ggtgttcacc gacggaatgt aaatctgccc tgctgcccgg
      121 gcgctggtgt gagtgatctt cagccgcgga atgaacccga gctgcattgc ctgttgggtg
      181 acggagaaag cacccgagat gaccgcctgg ctggcgataa tcgtcgccat agtcgctatc
      241 agcacaagcg ggaaccggaa ccactctggc gcaagcagga agaacgggct gctgaccgct
      301 gacgggtcgg cgattagcag tgccccctgc cccatatagt tcatcatcag cgccggcatg
      361 acgaacatcc accagccgtt acggatcggc cgccggccga aatggcccat gtcggtgtac
      421 agggcctctg tcccggtgac cgcgaggacg acggagccga gcgcaaggaa acccagccac
      481 ttgtcgatta tgaagaaatt gatcgcgtaa tagggattga gcgcccacag gatttccgga
      541 tgccgggcga tgctcgtggc accgagcacg gcaatggtcg cgaaataggt ggtgacgacc
      601 gggccgaaca acgccccgac cctggccgtg cccgtcctct gcagcatgaa cagcccgaca
      661 aggatcgcga tagcgatcgg aatcacggca ggctgcaggc ttgactgaac caccgtcagt
      721 ccttcaaccg cggaaaggac ggaaatcgcc ggggtaatca tcgaatcccc gtagaacaga
      781 gcacaagcga acacgccgag aaggactatc cctgtcgacc gtcggatatt cgccttccgc
      841 gagatgagcg ccagtaaggc caggctgcca ccctcgccct tgttatcggc gcgggtgagg
      901 attgttatgt atttgatgcc gaccaccagc atcatcgacc agaaaatcag cgaaatgacg
      961 ccatagacct ggaccctggt aatcggcagc ggatgcgcgc ccgcgaacgt ctctcgcatc
     1021 gcgtaaagcg gactagtgcc gatgtcgccg aacacgactc cgagcgcgag caatgtgagc
     1081 ccggcgacgc tggcttgctg cggcacgtgg cccgcgggac gagccgcggg ctcagcttct
     1141 tctgcgattt tcgtcatcgg cggagtttga caacctcgga gattttcgcc tcgtacgccg
     1201 cgtccggtct ggccgccgcc tagcactcgc gcactggagc cgcaatcgct gcttacaact
     1261 ggtcaaagcc cgtctatagg cgccgcccaa gcgatagtta gagcgaggga atgatgcgga
     1321 ttggggtacc cagagagatc aagaacaacg agttccgggt cggtctgacc cccggatcgg
     1381 tcgccgacat cgtcgccgcc ggacacgagc tgttcgtcga aacgaacgcc ggcgatggaa
     1441 tcgactgccc cgattccgcg ttcaagaatg ccggcgcgac catccttgga agcgaggcgg
     1501 aagtgttcgc cgcgagcgac atgatcgtga aggtcaagga gccgcagccc gaggagatcg
     1561 ccctgctcga gcccaggcac atcctgttca cctatttgca tctcgccgca gatcgtccgc
     1621 agacgctcgg gctcatggaa tccggcgcca catgcatcgc ctacgaaaca gtgactgcga
     1681 acaacgggtc gctcccgctc ctcaaaccga tgagcgaggt cgcgggccgg atgtcggtcc
     1741 aggtcggcgc ccactatctc gaaaaggaac agggcggccg cggcgtgctt ctcggcggag
     1801 tccccggcgt cggtccggca aaggtcgcga ttctcggcgg cggggtcgcg ggagtgaacg
     1861 cggcgcaaat ggcggtcggg atgcgggccg acgtgaccat ctacgacatc aacatggagc
     1921 ggctggccga actcgacatg ttcttctcga gcaagatcaa gaccgcctac gcctcgcgag
     1981 cgacgatcgc gcgcgctgtc gaaaagtcgg agctggtcat cggtgccgtg ctggtgcccg
     2041 gggcagccgc tcccaagctg gttacccgcg acatgctgag cacgatgaag cgcggatcgg
     2101 tcctcgtcga catcgcgatc gaccagggcg gctgcttcga gaccagccac gcgacgactc
     2161 acgccgaccc ggtctacgaa gtcgacggga tcatccacta ttgcgtcgcc aacatgccgg
     2221 gggcggtggc gcggacctct gccttcgctc tcaacaacgt cacccttcca ttcgtcctca
     2281 agatcgcgaa gctcggggcg gaagaggcga tgcgacgcga cccgcatctt gcaaacggcc
     2341 tcaacgtctc aggcggcaag atccgccacc aggccgtcgc ggaagcgctc gaccttccgt
     2401 acgaacccgc tctcggactg gaacactaag gctttggcgg cgccttcggc tgaagcgcgg
     2461 cgaccgcgtc ttcgaccatc ggccgccacg gcgcgtcggc cggtgccgac gcgagcagct
     2521 ccttccacag ggcgaccgcg ccgtcgccgt cgcccgaacg cgccagcgcc aatcccatga
     2581 aaaacagggg agccggatgt ccgggcgcga gctcggcggc gcggcgatag gcgagatcgc
     2641 tggcgggggt cagcacgcct gcgtgatcga ccagcgcatt gccgagcccg agccaaagct
     2701 gcgcatcgcg cggatgctcg ccgactgccg cccgaaggac cccgaccgcc tgctcggtct
     2761 ttccccggct cgcgagcgac tccgacatca gcagccaatg ctcggtgctg gagaagttgc
     2821 cgaagaaagc gtgccggacg ttcgccagtg ggaccggcgg atcctcccgg cctgcagcgc
     2881 gctcggaccc tgggagtccg ggccgtccct ggagcgcgta gccggcacac ccgaagaaca
     2941 gcgccgcagt gccgagctgc aacatcgatc cccggagccc gagcagccgg agcatcgccg
     3001 ccgctgcggc agtgaccatg gcgagcatga tccagccgct caatttttcg ccctccgccg
     3061 cagccggctt cgcgccagcc acgcccctcc gaccagcagc gcaattggag ccagccacaa
     3121 cggccaggta atcggctcgg ccggcgggcg ataggtaatc cacgcgccat agcgctggat
     3181 cagccaggag cggacttccg aggggtcttc gccggctgcg atcctgcggc gcacgagatc
     3241 gcgcatgtcg cctgcaagct ccgcgtcgga gtcggcgatc gactggccct ggcaaaccag
     3301 gcaacggatc tcctccatca gcgcccgggc gcgcgcctcc tggcgggcgt cgggaagctg
     3361 ccggtcggcc caatgagcgg gcggcagcga cgaatcggca agcgccggag cggcaatcgc
     3421 cagtgcgacg caaatggcga ggcgcttcat ttcgcgctct cgaccgcggc gacaatcgcc
     3481 ggaatttcat ccggctcgat cggaccgata tgctgcatcc gaatcactcc gcggccgtcg
     3541 acgacgaagc tttcgggcac gcccgcggat ccgaacgcga gctgcaagct gctctgaggg
     3601 tcggatccga tacgctcgaa cggattaccg tgctcggcga ggaattcggc gacatcctcg
     3661 ggccggtcgc gcacggcgat cccgacgatc gtgactccgc gtcgcttcag ctcggtcagg
     3721 acgggtgcct cggcgatgca gggcacgcac cagctggcga agatattcac caaccgcgga
     3781 ttcccgtcgg caaggtcggc ggaagacagc gtaggagtgc cggcgaccgc ggccgccgca
     3841 gcgaactcgg ggattggctt gcccaccatc tgcgactgga tctcggcgtc gggcgggctg
     3901 gcgaggcgcc agaccagcac agccaccagc atcacgatca ctgccaccgg gacgaagcga
     3961 agccacctca tgcctctcgc tccttgcgcc agccccgcca cgcgcgccct ccaagcgcaa
     4021 gggcgccgcc aagggcgatc agcgcgcctc cgagccagat caacgtcacc agcggtttcc
     4081 accacagacg aagttgccag cggccgtctt cggcgggctt gccgagaact gtgtagagct
     4141 ggcccgaaag cacagtgtcg atcgccgctt cggtagtttc ggtcggggga tttgagtaga
     4201 agcgcgcttg cggcttgagc acactgacgc ccgatccgcg cgaggcacga agttccgcct
     4261 cgatcgcggt ccagttcgac cccgccgccg gagtgacggc ctggaactcg atcatccacg
     4321 gcccgaccgc gatccggtcg ccggggcgag ccgcggtcag gacctccgtc gtcgccatcg
     4381 tgctcaccgc catccctgcg attccgaccg cgactccgaa atgggcgacg accatgcccc
     4441 aggtcgacag cggagtgcgc cggagctttc ggccggcaag cggcaggaag gccgcgattg
     4501 cgagcatcgc ggcgactcca acgccgacct tcgagagcag gccgccgccg gggatgacga
     4561 tgaaagcaat gactgccgca gtcacgccgg cgagccccgg aattgccagc cgcttcagcc
     4621 tttcgcccga atcccgccgc cagcgcagga gcggtcccac tccgaccaga accgcgagaa
     4681 gaagtgcgag aggccccgcc accgaatc
//
LOCUS       DATAKH010000201         5389 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_19418,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000201 DATAKH010000000
VERSION     DATAKH010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5389
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19418"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VHN55_08375"
     CDS             <1..288
                     /locus_tag="VHN55_08375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010187105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX2803978.1"
                     /translation="AGIEMDVAAHRVRRDGEPLALGPTEYRLLRHFLQNPEKVYSRQQ
                     LLEEVWPHNEDIELRTVDVHIRRLRQALESGGGKDVIRTIRSEGYSLDVNA"
     gene            complement(294..367)
                     /locus_tag="VHN55_08380"
     tRNA            complement(294..367)
                     /locus_tag="VHN55_08380"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(333..335),aa:Gln,seq:ctg)
     gene            637..1635
                     /locus_tag="VHN55_08385"
     CDS             637..1635
                     /locus_tag="VHN55_08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX2803979.1"
                     /translation="MPPERRLPRLHSHRHTYGALDLGTNSCRLLVARPSDGGFTVIDA
                     FSRIVRLGDGLSRTGKLSDEAMDRAVGALSICADKLRRRHVSLSRSVATEACRRAANG
                     RKFVERVREQTGIALEIIDPAEEARLAMLGCHKLLEPGEGPALIFDIGGGSTELVLID
                     QLSGVPSIRSWWSAPWGVASLTDSEGREAIEGEDRVKAYKRMRERVRRSFDQFEAMLP
                     RDREGIRLLGTSGTVTTLASVHLALPSYDRRAVDGLHVPTDAVHAISTMIAEMDFEER
                     AALPCIGPDRADLVVAGCAILQAILEIWPATKLGIADRGIREGILRSMMARDGFTL"
     gene            1632..2300
                     /locus_tag="VHN55_08390"
     CDS             1632..2300
                     /locus_tag="VHN55_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEX2803980.1"
                     /translation="MSRGRGPRQRVRTARGRTASSTRWLERQLNDPYVRRAKAENYRS
                     RAAYKLLELDERFSLLKGVTAIVDLGIAPGGWSQVVRRRSPKARIVGIDLLPTDPIDE
                     VAILQMDFMDEAAPDRLKAELGGPADLVLSDMAANTVGHPQTDHLRTMGLVEAALEFA
                     KEVLRPGGAFVAKVLAGGADSNLVAELKRHFETVKHAKPPASRKDSSEWYVVAQGFKD
                     VPHN"
     gene            2357..2830
                     /locus_tag="VHN55_08395"
     CDS             2357..2830
                     /locus_tag="VHN55_08395"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEX2803981.1"
                     /translation="MLATVYALLISAALAILTIFIHYEVLTTSWPIRSGAAVTLRAHM
                     ARLLTGIFIAHLIEIAIYAAAYYLMHDHLGLGTINGATGEGLSDYFYYSITSYTTLGF
                     GDLYPSGPIRIVTGIESLNGLVLIGWSTSYTYLAMQRFSRAGRRSAALDHPHELS"
     gene            complement(2834..3553)
                     /locus_tag="VHN55_08400"
     CDS             complement(2834..3553)
                     /locus_tag="VHN55_08400"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX2803982.1"
                     /translation="MNSSPTPPAGRLGAAIIGGAIGAVLMTAILLFAAPQLLGSRLVR
                     SGLMADPQILVDASEALRDKQYEPVLAEHRAEIETPFATSWKGASKPDVTLVEFFDYA
                     CPYCKASNPDIERLLREDKGLRVVYRELPILGEDSVAAARLSLTASKAGRFAQFHDAL
                     WEAGRPGPQTLAVASEAAGLTGPPSASPDIEAELKKNFQLAGALGATGTPLFVIGDRV
                     LNSAVGYDELKKAIEQARSDR"
     gene            complement(3550..4902)
                     /locus_tag="VHN55_08405"
     CDS             complement(3550..4902)
                     /locus_tag="VHN55_08405"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX2803983.1"
                     /translation="MALVLAVSVTTPVAAADSEPSSLRDAETELLFREMGAPLFRAAD
                     LSPDSVRIVLLNDPEINAFVASGQTVYIQSGLLLAADNVNQLQGVVAHELGHVAGGHS
                     IRLQQGIGTATGITVATMILGAIAVAAGAGDAGMGIMMAGQRAALGKLLAFTRAQESS
                     ADAAGAAYLSRAGISGKGMLAFFGKLQNQEYRLAIYETESYDRTHPLSTERIQALETK
                     LKADAAWNRPVDPKLEEQFQRVKAKLYGFVNAKQAVIKYPESDTSVPGHYARAYAYHV
                     SGYPQKAVAEADALLAIDPHDPFFLELKGQILLESGRAADAIAPLREATERSGDSPLI
                     ASMLGHALIATEKRENFIEAKQVLKSAVNRDNENPFAWYQLGVIYNQEGDAARAALAT
                     AERNNLEGKPKLALASAEAAMKGIAAGTPDYLRAQDIAMVSRAELAKTDKRYREKTDK
                     "
     gene            complement(5011..>5389)
                     /locus_tag="VHN55_08410"
     CDS             complement(5011..>5389)
                     /locus_tag="VHN55_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803984.1"
                     /translation="DAKPAETPEVEPDSSPMVERPTDEEPPIADTQAAAEPEPKPKAR
                     RSRKKKAESPDAPEPAPPEAPPAETADDAQPADKPKRRTRKAKPKTEPDKPSKASASV
                     ADNDPNGEESGKPRSGWWQRTFG"
BASE COUNT          882 a         1775 c         1743 g          989 t
ORIGIN      
        1 gccggaatcg agatggacgt cgccgcccac cgggtccgcc gcgatggcga gccgctggcg
       61 ctcgggccaa ccgaatacag gctccttcgc cacttcctcc agaatccgga gaaggtctat
      121 tcgcgccagc agctgctcga ggaggtgtgg ccgcacaatg aggacattga gctgcggacc
      181 gtcgacgtcc acatccgccg ccttcgccag gcgctcgagt ccggcggcgg caaggacgtg
      241 atcaggacaa tcaggtcgga aggctattcg ctggacgtga acgcctgagc ggctggatgc
      301 cccgcgtgga ttcgaaccac gattgacgga ttcagagtcc gtagtcttac cattagacga
      361 cggggcaatc gccggcgaca gcgagcgcgc gagataggga gtagccctag cgggtgtcaa
      421 ccggcgtcgg gcggcccgat cgtgcccgcc gcaacgccga aagataggcc gaaaaccccg
      481 caatcttgcc ctcttaccct attcgggcct acattcgggg caagtcagcc gtcggtatca
      541 cccggcggtg gaaggataag aacgggcgtt tgcttgatgg cgcaggatgt cgccagcgcg
      601 ccgggaccgc agatgcggga ggaaccggcc ttgtcgatgc cgccggaacg gcggctcccc
      661 cgtttacatt ctcatcgcca cacctatggc gcgctcgacc tcggcaccaa cagctgcagg
      721 ctgctggtcg ctcggccgag cgatggcggc ttcaccgtga tcgacgcctt ttcccgaatc
      781 gttcgccttg gcgacggctt gtcgcgcact ggcaagctgt ccgacgaggc gatggaccgc
      841 gccgtcggcg cactgtccat ctgcgctgac aagctcaggc gccgccatgt ctcgctgtcg
      901 cggtcggtag cgacggaggc atgccggcga gccgccaatg gccgcaagtt cgtcgagcgg
      961 gttcgagagc aaaccggtat cgcgctggag atcatcgatc ccgccgagga ggcccggctg
     1021 gccatgctcg gctgccacaa attgctcgag cccggcgaag gcccggccct cattttcgac
     1081 atcggcggcg ggtcgaccga gctggtcctg atcgaccagc taagcggcgt tccgtcgatt
     1141 cggagctggt ggagcgcccc gtggggggtg gcttcgctga ccgacagcga gggccgcgag
     1201 gcgatcgagg gcgaagacag ggtcaaggcg tacaagcgca tgcgcgagcg ggtccggcgg
     1261 tcgttcgacc agttcgaggc gatgcttccc cgggaccgcg agggaatccg cctgctgggc
     1321 accagcggca ccgtcactac tctcgcaagc gtccatctcg ctttgccaag ctacgaccgc
     1381 cgagccgtcg acggactcca tgtcccgacc gatgccgtgc acgccatcag caccatgatc
     1441 gccgagatgg acttcgaaga gcgggcggcg ctgccctgca tcggtccgga ccgagcggat
     1501 ctcgtggtcg ccggctgcgc gatccttcag gcaatcctcg aaatctggcc ggcgacgaag
     1561 ctcgggatcg ccgaccgcgg aatccgcgaa ggaatcctgc gttcgatgat ggcaagagac
     1621 gggttcacct tgtgagccgt ggccgcgggc cgcgccagcg agtccggacc gcccgcggac
     1681 gtaccgcctc ctccacccgc tggctggagc ggcaactcaa cgacccgtat gtgcggcggg
     1741 ccaaggcgga gaattaccga agccgagcgg cctacaagct gctcgagctc gacgagcgct
     1801 tctcgctgct gaaaggcgtc accgcaattg tcgatctcgg catcgcgccg ggcggatgga
     1861 gccaggtcgt ccgccgccgc tcgccgaagg cgaggatcgt cggaattgac ctgttgccga
     1921 ccgatcccat cgacgaggtc gcgattcttc agatggactt tatggatgag gccgcgcccg
     1981 accggctgaa ggcggagctc ggaggccccg cggaccttgt cctctctgac atggcggcca
     2041 ataccgtcgg ccacccgcag accgaccatt tgcggacgat gggcctggtc gaagccgcgc
     2101 tcgaatttgc caaagaggtg ctgcggcccg gcggggcgtt cgtcgccaag gtgctggcgg
     2161 gcggcgccga ttccaatctg gtcgccgaac tcaagcgcca cttcgaaacg gtcaagcacg
     2221 caaaaccgcc cgccagccgc aaggattcgt cggaatggta tgtcgtcgcg cagggcttca
     2281 aggacgttcc gcacaactga gttcgcaaac cgccgatccc ggaatacaat gagccggaaa
     2341 tcgagggggg aggccgatgc tcgcgaccgt ttacgcgctt ctgatttccg ctgcgctcgc
     2401 catcctgacg attttcatcc actacgaggt gctgacgacg agctggccta tccgttcggg
     2461 cgcggccgtg accttgcgcg ctcacatggc ccggcttctc accggaattt tcattgctca
     2521 cctgatcgag atcgccattt acgcggccgc ctattacctg atgcacgacc atctcggcct
     2581 cggcacgatc aacggggcga ccggcgaagg gctcagcgat tatttctatt attcgatcac
     2641 cagctacacg actctcggct tcggcgacct ctacccgagc ggcccgatcc ggatcgtcac
     2701 cggaatcgaa tcgctcaacg gcctggtgct gatcggctgg tcgacgtcct acacctatct
     2761 cgcgatgcag cgcttttcgc gcgccggccg gcggtcggcc gcactcgatc acccgcacga
     2821 gctttcgtga gggtcagcgg tcgcttcgcg cctgctcgat ggccttcttg agttcgtcgt
     2881 agccgaccgc gctgttcagc acccggtcgc cgataacgaa cagcggagtg ccggtcgcgc
     2941 ccagcgctcc cgccagctgg aagttctttt tcagctcggc ctcgatgtcg gggctcgcgg
     3001 acggcgggcc cgtcaatccc gccgcctcgc ttgcaacggc gagcgtttgc gggcccggcc
     3061 gccccgcttc ccacaaagcg tcatggaatt gcgcgaagcg tcccgccttg gaggcggtga
     3121 gcgaaagccg cgccgccgcg acgctatcct cgccgaggat cggaagctcg cgatagacga
     3181 cccggagccc cttgtcctcc cgaagcagcc gctcgatgtc ggggttgctc gccttgcaat
     3241 aagggcaggc gtaatcgaag aattcgacaa gcgtgacgtc gggcttgctc gctcccttcc
     3301 aggacgtggc gaacggggtt tcgatctcgg cgcggtgctc cgcaagcacg ggctcgtatt
     3361 gcttgtcgcg aagcgcctcg cttgcatcga ccaggatttg cggatccgcc atcaatccgg
     3421 agcggacgag gcggcttccg agcagctgcg gtgcggcaaa aagaaggatc gcggtcatca
     3481 ggacggcgcc aatcgcgccc ccgatgatcg ccgccccgag acgccccgcg ggcggtgttg
     3541 gtgaactgtt cacttgtcgg ttttttcccg gtagcgcttg tctgtcttgg cgagttccgc
     3601 gcgcgagacc atggcgatgt cctgggcgcg aagatagtcc ggagtgcctg cggcaatgcc
     3661 cttcatcgcg gcttcggcgc ttgccagcgc cagcttgggc ttgccttcga ggttgttccg
     3721 ctcggcggtc gcaagcgcgg cccgggcagc gtcgccttcc tggttgtaga tcactcccag
     3781 ctggtaccag gcgaacgggt tttcattgtc ccggttgacc gcggacttga gcacctgctt
     3841 ggcctcgatg aaattctcgc gcttctcggt cgcgatcagc gcgtgaccga gcatggaagc
     3901 gataagcggt gagtcgcccg agcgctccgt cgcttcgcgg aggggagcga tggcgtcggc
     3961 agcacggccg gactcgagca ggatctgacc cttgagctcg aggaagaacg ggtcgtgcgg
     4021 gtcgattgcg agaagggcat cggcctccgc cacagccttc tgcggatagc cgctcacgtg
     4081 ataggcataa gcccgcgcat aatggcccgg tacgctcgtg tcgctttccg gatatttgat
     4141 cacggcctgc ttcgcgttga cgaacccgta aagcttcgcc ttcacgcgct ggaactgctc
     4201 ttccagcttc gggtctaccg gcctgttcca ggccgcatcc gcctttagct tcgtctcaag
     4261 cgcctggatt cgctccgtcg agagggggtg cgttctgtcg tagctttccg tttcgtagat
     4321 cgccaggcga tattcctggt tctggagctt gccgaagaat gcgagcatgc ccttcccgct
     4381 gattcccgct ctcgacagat aggccgcacc ggcggcgtcg gcgctgcttt cctgcgcgcg
     4441 tgtaaaagcg agtagcttgc ccagcgcggc ccgttgcccc gccatcatga tccccattcc
     4501 agcgtcgccg gcgccggctg cgactgcgat cgccccgagg atcatcgtcg caacggtaat
     4561 cccggtcgct gttcctatgc cttgctgaag gcgaatcgaa tggcccccag cgacatggcc
     4621 gagttcatgg gcgacgacgc cctggagctg gttcacattg tccgcggcaa gaagcagccc
     4681 ggactggata taaaccgtct ggccgctggc aacgaaggcg ttgatttcgg gatcgttgag
     4741 aaggacgatt cggacgctgt ccggactgag gtcggcggcc ctgaacagcg gcgcccccat
     4801 ctcccgaaaa agcagctccg tctcggcatc gcggagcgac gacggctcgg aatcggcggc
     4861 ggcgaccggc gttgtcaccg acaccgccag gaccagcgcc atcatcacca ggcgcatcag
     4921 ccgggacaga gcggaaatca tcatccgttc ctcacactac cgccctgaac cctgcatgaa
     4981 accagggcct ttcgctacct ctccgcaagc ctagccgaaa gtgcgctgcc accagccgct
     5041 tcgaggcttg ccggattcct ctccgttggg atcgttgtcc gcgaccgagg cggaggcctt
     5101 cgaaggcttg tccggctcag tcttcggctt tgccttgcgg gtccgccgct tcggcttgtc
     5161 ggccggctga gcgtcgtcgg ccgtctcggc cggaggcgcc tccggcggag ccggctcggg
     5221 cgcatcgggg ctttcagcct tcttcttgcg gcttcgcctt gccttgggct tcggctcggg
     5281 ctcggcagcg gcttgagtgt ccgcgatcgg cggctcctcg tcggtcgggc gctcgaccat
     5341 cggggagctg tcgggctcga cctcgggagt ttcggcgggc ttggcgtcc
//
LOCUS       DATAKH010000202        17409 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26160,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000202 DATAKH010000000
VERSION     DATAKH010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 17409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17409
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26160"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1644
                     /gene="sdhA"
                     /locus_tag="VHN55_08415"
     CDS             <1..1644
                     /gene="sdhA"
                     /locus_tag="VHN55_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007685819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEX2803985.1"
                     /translation="QGGIAAALGNMGPDHWTWHMYDTVKGSDWLGDQDAIEYLTREAP
                     QAVIELEHMGLPFSRTPEGKIYQRAFGGMTQNMGEGPAAQRTAAAADRTGHAMLHTLY
                     QQSLKYDADFFIEYFAIDLIMESGACRGVIALNLEDGSIHRYRAQAVVLATGGYGRTY
                     FSATGAHTQTGDGNAMVLRAGLPLQDMEFVQFHPTGVYGVGVLITEGVRGEGGYLTNS
                     EGERFMERYAPSAKDLASRDVVSRSMVMEIREGRGVGEHKDHLFLHLDHLDPKIIAER
                     LPGIAESAMTFAGVDVTRQPIPVVPTVHYNMGGIPTNYHGEVVTIRDGDPDSVVPGLF
                     AVGEAACVSVHGANRLGSNSLIDLVVFGRAAGMRLGEVVKAGALQEPLPKDSSDFALQ
                     RLDHFRHAEGTNPTAKLREEMQRTMQADASVFRTERTLAEGVTKIDAVYDRMKSIGVT
                     DRSLIWNSDLVETLELDNLIAQAVVTMHCAANRKESRGAHMHEDYPKRDDANWMKHTV
                     AWFDGWGGKGGQVKIDYRPVHDYTLTDDIDYIKPKARVY"
     gene            complement(1678..2610)
                     /locus_tag="VHN55_08420"
     CDS             complement(1678..2610)
                     /locus_tag="VHN55_08420"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014074868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEX2803986.1"
                     /translation="MKRFTHDEPLPDELRGSVVALGNFDGFHLGHQAVVSRAVALGFH
                     ERRPVIVATFDPHPVRYFKPDVPPFRLTSLNQRERLFAHAGADSMLVFKFDQALASMD
                     ADEFVADVLARRIGAAAVVTGDDFSFGKGRTGDVDLLRKLGKAHGVTAEAVAQVMIGG
                     ERVSSGRVREALAAGDPATATHLLTRPFAVEAVVEQGDGRGHELGFPTANVSLGRYQR
                     PAYGIYAVRVRLDDDSEHSGVASFGVRPTFEEGEEFLETYIFDWDGDLYGRTIETSLV
                     AWIRPEEKFDSAEALITRMRADEAEARRVLGVAG"
     gene            2871..3239
                     /gene="rpsM"
                     /locus_tag="VHN55_08425"
     CDS             2871..3239
                     /gene="rpsM"
                     /locus_tag="VHN55_08425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEX2803987.1"
                     /translation="MARIAGVNIPSNKRVEIALTYIHGIGRTTAKTIVEKLGIAPERR
                     VQDLSDQEVLHIREAIDSGQTVEGDLRRETAMNIKRLMDLASYRGLRHRRGLPVRGQR
                     THTNARTRKGKARPIAGKKK"
     gene            3346..3735
                     /gene="rpsK"
                     /locus_tag="VHN55_08430"
     CDS             3346..3735
                     /gene="rpsK"
                     /locus_tag="VHN55_08430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEX2803988.1"
                     /translation="MAQAPQRLRRRERKNITAGVAHVNASFNNTMITITDAQGNAIAW
                     SSAGMMGFKGSRKSTPYAAQVAAEDAGKKAADHGVRTLEVEVKGPGSGRESALRALQA
                     VGFTITSIRDVTPIPHNGVRPSKRRRV"
     gene            3827..4897
                     /locus_tag="VHN55_08435"
     CDS             3827..4897
                     /locus_tag="VHN55_08435"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEX2803989.1"
                     /translation="MAVNVKNWQELKKPNALEKKPGSGDSKSRAVFVAEPLERGFGMT
                     LGNSLRRVLLSSLQGAAVTSIKIEGALHEFSSLPGVREDVTDIVLNVKQIALKMEGEG
                     PKRLQLSATGPAEVTAGMIATTGDMEVTNPDVVICHLDDGATLNMELTADIGKGYVPA
                     AANRPADAPIGLIPVDALFSPVRQVAYKVENTRVGQELDYDKLTLTIETDGTVTPEDA
                     LAYGARILQDQLQLFVHFDESAMRAAAPSQMIGAPAMAAETPADTNQLNRYLLKKVDE
                     LELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLASMGLRLGMD
                     IPGWPPENIEEMAKKLEQEMLG"
     gene            5403..6230
                     /locus_tag="VHN55_08440"
     CDS             5403..6230
                     /locus_tag="VHN55_08440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018075808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX2803990.1"
                     /translation="MDIAAARTFLEIVKTGSFVRAAANLNITQTAVSARVRVLERELD
                     RQLFVRNKAGARLTPAGDQFLRHATTLVGVWERARHEVAMPPGRSEVVTIGGEHSLWD
                     PLLLDWLVWMRSECPDVAIRAQIDVSDRLIDHVQEGVLDLAVVYAPPQRTGIVPELLQ
                     DETLVAVATAESSQDEVYVDWGSEFRASHHSAFPDAATPALTVDHGPLALQYILAVGG
                     SGYFRAEAARPYLESGQLKLLAGKPRFSYSVYAVYSAKADERLMERVRSGLRAVSRT"
     gene            6323..6730
                     /locus_tag="VHN55_08445"
     CDS             6323..6730
                     /locus_tag="VHN55_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803991.1"
                     /translation="MDSCPANPVSEFESDGAPTNRPLAKTRSIGPFQDIPGWIWKIFL
                     SAWGTLFLIFALFFTTDRGVTFAITIALLFAMMAFGLPSAMAAQGRCPGYKCRGMIAT
                     RSGALTQRAAATQILLIPVSAVLGLIAFVLLAT"
     gene            7075..7494
                     /gene="rplQ"
                     /locus_tag="VHN55_08450"
     CDS             7075..7494
                     /gene="rplQ"
                     /locus_tag="VHN55_08450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEX2803992.1"
                     /translation="MRHRVGGRKLQRTSSHRAAMFRNMAAALIKHEQITTTTAKAKEL
                     RPYVEKLVTLAKKGGLSNRRIAHSRIMDETQERKLFDVIGPRYADRAGGYTRVIKAGI
                     RASDAAAIAIIEFVDRDVSAKGQDSGPVMAEDEFEAA"
     gene            7619..8200
                     /locus_tag="VHN55_08455"
     CDS             7619..8200
                     /locus_tag="VHN55_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803993.1"
                     /translation="MKAVSKIAIGAVGLAAFAGASAPAAAQYYPGYGYGYGQYGYSPN
                     VIGQVLQSILNPYGQFGYGGYGRIHPQTAVNQCTAAVQQRLAYQNRGYGGYGYGGYGT
                     YGGYGGYNNARILGITRVEQRSPTTLRVRGYASSGMSYGSPYGGYGGYSGAYGGYGGT
                     YGGYGQQVVADLTFKCDVDYRGYVRDVDIDRRR"
     gene            8424..10466
                     /locus_tag="VHN55_08460"
     CDS             8424..10466
                     /locus_tag="VHN55_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010164551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX2803994.1"
                     /translation="MAYPETRRIDLVEDHFGVKVADPYRWLENDVRSDSEVRAWVDAQ
                     NRATDAYLATLPGRDALKARLTQLYDYERFWVPVKKGGRYFYTRNSGLQNQSVLFVRD
                     TLEGEGRVLIDPNTWSADGATALAEWKPNDQGTKLLYAVQDGGTDWRTLKVRDVTTGE
                     DLPDTIKWAKFTDLTWAKDGSGFYYSRYPEPAAGTAYQTSSRDQTIHFHKLGTAQSED
                     RLVFAMPDHPELYHGTGITEDGKWLVVSSSESGNEYQVALIDLSRPGSKPRVIVPEFK
                     DIYGFVGSKGSTLYFITNKDAPKLRIVAFDLAQAQLAAKTVVPEAEATLDTAKLAGGR
                     LIVTYLADAKSEVRVHELDGSLVRTIDLPGIGTAGAFTGEADDPETFYAFMSFNRPTT
                     IYRYNVATGESSAWATPRVAFNPEDYSVEQRFYASKDGTRVPMFIVRKKIVTGPAPTL
                     LYAYGGFNIAMTPSFSSSRLAWLEKGGVYVLANIRGGSEYGKAWHDAGRLANKQNVFD
                     DFIAAGEYLKANGITSPKGLAIEGGSNGGLLVGAVVNQRPDLFDAAHPAVGVMDMLRF
                     DRFTEGHSWVDDYGYPDKEADFKTLLAYSPYHNIKPGVHYPPLLATTADTDDRVVPGH
                     SFKYIAALQAADPNGAPHLIRIETRAGHGSGKPTAKIIEEAADVYAFLAHFTGLGE"
     gene            complement(10476..11300)
                     /locus_tag="VHN55_08465"
     CDS             complement(10476..11300)
                     /locus_tag="VHN55_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX2803995.1"
                     /translation="MAASPSRSPGVSLLLLLVCTVVAALLGGFAARLLPIESSAKGEA
                     APTLVAPPSDISLSPLVSRTAPAVVTIAVLQPSPADQNPLLQDPFFRRYFGVPDAALR
                     PAVSAGSGVIIDGKRGFVVTNFHVVRNARAVEVGLKDGRQLPAKPVALAPQLDIAVLQ
                     IDARDLPQLPLGDSSKLEVGDYVVAIGNPFGLGQTVTSGIVSATARPLVANDQRRFIQ
                     TDAPINPGNSGGPLIDLQGNVVGINSALFSPDGGAGNVGIGFAIPSNVVKGVLAEI"
     gene            11389..11736
                     /locus_tag="VHN55_08470"
     CDS             11389..11736
                     /locus_tag="VHN55_08470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2803996.1"
                     /translation="MRTSAKCWSLILVALSAMPLGGCVAGLALGAANMAASAAHRPGA
                     SNEHLKPAARAACSERAAAHGPVNIIDVEQRSVDRIVVWGTVETARGKLSFECGFRTA
                     IAYFKLREIKRRQ"
     gene            complement(11767..12306)
                     /locus_tag="VHN55_08475"
     CDS             complement(11767..12306)
                     /locus_tag="VHN55_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEX2803997.1"
                     /translation="MSDLLPIFTIGHSTRSIAEFVEILRSGPADMVVDVRTVPKSRRN
                     PQYNEDALGDELADWQIGYTRIAGLGGLRGRAREVPPEVNGYWENQSFHNYADYALSA
                     VFSAALEKLLDLSAERRTAIMCAEAVWWRCHRRIIADYLLARGRSVLHLMGSGRVEPA
                     RFTPGAEVQDGRIVYPPAE"
     gene            12378..13652
                     /locus_tag="VHN55_08480"
     CDS             12378..13652
                     /locus_tag="VHN55_08480"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEX2803998.1"
                     /translation="MDSTRRQMLQGMLAAAAINWPAASRAASPVPIPVSAPGEFEPQD
                     YIWLAWVERGFFGSAPFSSVALEVMKVITPHVRVRLLHSGQLPRPTGRWEPPLLSRQE
                     SEARVRSILASAGVDLSRVELIYNERVYASIQDPGPFFLRTSTGGLALADYHFKHPDP
                     RAEAIDRTIAAELGLPTIRSELVSEGGGRQSNGRGTLLLVRAVEQARNPRWPIADIER
                     EHLRMHGAGKVVWLEQGPADEEWGKLADGRWGIGTGGHVDVFARFADSSTVLLAQVSP
                     AQRRKYPILAQTHARMERNHELLRAATDQDGKPFRILRVPVPDPLTATVRYDDLSPEE
                     RSWFEGSRPGETIEYYLPAGYLNFIIANGVVVTARLHEPGRPERLRETDRQARAALQR
                     AFPGRKIAQVGVTPLLHDGAGLHCHSRNQPAI"
     gene            complement(13681..14943)
                     /locus_tag="VHN55_08485"
     CDS             complement(13681..14943)
                     /locus_tag="VHN55_08485"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX2803999.1"
                     /translation="MIRVTAALLAGATLAAFAPPLVSLDAPSPITSVSAEQLDRLPAG
                     QRVEDLLKSCPASTVPTLTRPSPSTITLRGLPPQPGLSCIQPEDIQMVEVLKNHNDIR
                     AIYGARPLVWDPLLASQARSNVHTLAGIGRLVHSPRAGREWSRENLLQALPGTPVGQM
                     VKVWIDERRFFKPGLFPDISLTGDWYVAGHFTQMIWPTTTAVGCGVQRGIGNYDWMIC
                     QYSPPGNQDGKPVGYPSMPQPRHAAGSPPGPQMRGVAGQDLQMVLEADTGAKVIGGEW
                     VGPTSTRTPQPRGVAGQDGIAPATSTTTTAPPPPPTARDEAPEGKEEKHPLVNYYSGA
                     FARYVAAVNCGDQAAADAEMARMRYALEELRKRLRAARRAGPYSGVNPADVQAQINNL
                     EQMLRSAEALRPTGACPPMPQPRGIVAQ"
     gene            15144..16703
                     /gene="guaA"
                     /locus_tag="VHN55_08490"
     CDS             15144..16703
                     /gene="guaA"
                     /locus_tag="VHN55_08490"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEX2804000.1"
                     /translation="MTVQPTDSILIIDFGSQVTQLIARRVREAGVYCEIAPFNAAEDA
                     FERMRPKGVIFSGGPSSVMEAESPRAPQVIFDSGLPLLAICYGQQTLHQQLGGKVVSS
                     DQREFGRAFIEVVAPSALFDGLWSVGEKHQVWMSHGDRVESLAPGFEVVAKSEGAPFA
                     IATDEDSKRYSLMFHPEVVHTPDGGKLLANFARHICGCAGDWTMAGFRDAKIAEIRDQ
                     VGDGKVICGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLMRAGEAEQVVSLFRGSYN
                     IPLVHVDASKDFLGGLQGVTDPEKKRKFIGAEFINVFEAEAKTIGGADFLAQGTLYPD
                     VIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRELGRELGLPDAFV
                     ERHPFPGPGLAIRIPGEVTAEKCDILRKADTIYLEEIRAAGLYDAIWQAFAVLLPVQT
                     VGVMGDYRTYDFVCALRAVTSVDGMTADVYPFEAAFLSRVATRIVNEVQGINRVVYDY
                     TSKPPGTIEWE"
     gene            complement(16716..17171)
                     /locus_tag="VHN55_08495"
     CDS             complement(16716..17171)
                     /locus_tag="VHN55_08495"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEX2804001.1"
                     /translation="MIQANVFDVLPHLAALVIAYVLALPIGWNREREERSAGLRTFPL
                     VAVATCGFIEAAEHLLVGHPEATARVVEGVITGMGFIGGGAILRMKDSVRGTATAASL
                     WVTGAIGMAVGLGSYDVAILLTLSTIATLWALSGFKRKIVHEKGNSETA"
BASE COUNT         3192 a         5547 c         5718 g         2952 t
ORIGIN      
        1 cagggcggga ttgccgcggc gctcggcaac atggggccgg accactggac ctggcacatg
       61 tacgacaccg tcaagggttc cgactggctc ggcgaccagg acgcgatcga atatctgacc
      121 cgcgaagcgc cgcaggcggt catcgagctc gagcatatgg ggctcccttt cagccgcacg
      181 ccggagggca agatctacca gcgcgcgttc ggcgggatga cccagaatat gggcgaaggt
      241 ccggccgccc agcgcaccgc cgccgccgcc gaccgaaccg gccatgcgat gcttcacacg
      301 ctctaccagc agagcctgaa atacgatgcc gacttcttca tcgaatattt cgcgatcgac
      361 ctgatcatgg agagcggggc ctgccgcggg gtcatcgccc tcaatctcga ggacggttcg
      421 atccaccgct accgagcgca ggccgttgtc cttgcgaccg ggggctacgg gcgcacctat
      481 ttctctgcga cgggcgccca cacgcagaca ggggacggca atgcgatggt gcttcgcgcc
      541 gggcttccgc tccaggacat ggagttcgtc cagttccacc caaccggggt ctatggagtc
      601 ggagtgctga tcaccgaggg agtccgcggg gaaggcggct acctgaccaa cagcgaaggc
      661 gagcgcttca tggagcgcta tgcgcccagt gccaaggacc tggccagccg cgacgtcgtg
      721 tcacgatcga tggtgatgga gatccgcgaa ggccgcgggg tcggcgagca caaggaccat
      781 ctgttcctcc acctcgacca tctcgacccc aagatcattg ccgagcggct tccagggatt
      841 gccgaatcgg cgatgacgtt cgccggcgtc gacgtgaccc gccagccgat ccccgtggtc
      901 ccgacggtcc actacaatat gggcggaatc ccgaccaatt atcacggcga ggtcgtcacc
      961 atccgcgacg gcgacccgga ttcggtcgtg cccgggctgt tcgcggtggg cgaggcggcg
     1021 tgcgtgtccg tccacggcgc caatcgcctc ggttccaaca gcctgatcga cttggtggtt
     1081 ttcggtcggg cggcaggaat gcggctcggc gaggtcgtca aggcgggcgc attgcaggag
     1141 ccgctgccca aggactcatc cgatttcgcg cttcagcgtc tcgaccattt ccgccatgcg
     1201 gagggcacca acccgaccgc caagcttcgc gaggaaatgc agcggacgat gcaggctgac
     1261 gcgtcggtct tccggaccga gcgcacgcta gccgagggcg tcaccaagat cgatgccgtc
     1321 tatgaccgaa tgaaaagcat cggcgtcacc gaccgcagcc tgatctggaa cagcgacctc
     1381 gtggagaccc tcgagctcga caacctaatc gcccaggcgg tggtcacgat gcattgcgcc
     1441 gcaaatcgca aggaaagccg cggcgcccac atgcacgagg actatcccaa gcgcgacgac
     1501 gccaactgga tgaagcacac ggtggcttgg ttcgacggct ggggaggcaa gggcggccag
     1561 gtgaaaatcg attaccgccc cgtgcacgat tacacgctca ctgacgatat cgactacatc
     1621 aagcccaaag cgcgggtcta ttgaaggcct ttcgcggttg gctttcttac cgggccccta
     1681 cccggcgacg cccagcaccc gccgcgcctc tgcctcgtcg gcgcgcattc gcgtaatcag
     1741 cgcttcggcg ctgtcgaact tctcctccgg gcgaatccac gcgacgaggc tggtctcgat
     1801 cgtgcgcccg taaagatcgc cgtcccagtc gaagatgtag gtctccagga attcctcccc
     1861 ttcttcgaag gtcggccgaa cgccgaagct cgcgaccccg ctgtgctcgc tgtcatcgtc
     1921 gagccggact cggaccgcat agatcccgta ggccgggcgc tggtagcgcc cgagcgagac
     1981 gttggcggtc gggaagccga gctcgtggcc gcggccgtcg ccctgctcga ccacggcttc
     2041 gaccgcgaat ggtcgggtta gcaggtgcgt cgccgtcgcg ggatcgcctg ccgccagtgc
     2101 ctcgcggacc cggcccgagg acacccgctc gccgccgatc atcacctgcg ccacagcttc
     2161 ggcggtcacc ccatgcgcct tgccgagctt cctgagcagg tcgacgtcgc cggttcgccc
     2221 cttgccgaag ctgaaatcgt cgccggtcac caccgcggcc gccccgatcc gccgcgcgag
     2281 gacgtcggca acgaattcgt ccgcgtccat cgacgcgagc gcctggtcga acttgaagac
     2341 gagcatcgag tcggcgccgg cgtgcgcgaa cagccgctcg cgctggttaa ggctggtcag
     2401 ccggaatggc ggcacgtcgg gcttgaaata gcggacggga tgagggtcga aggtggcgac
     2461 gatcaccggc cggcgctcgt gaaacccaag cgcgacggct cggctgacca ccgcctggtg
     2521 gccgaggtga aagccgtcga aattgccgag cgcgacgacg cttccgcgaa gctcgtcggg
     2581 cagcggctcg tcgtgagtga agcgcttcat cggacgcgcg ctgtatcggg gtggagcggg
     2641 cggggcaatc gtgccgctct ccagcttgac tcggggtcgc cccaatccta catgcagacc
     2701 atcccgatca accggttttc cggcggcgca ttcgtgcgcg cgtcggtttt tcgtttgcag
     2761 cgggtcgaat agcgacgaga tgggtgtcga attcgcgccg ggttttccac gtgtccgtgg
     2821 aacttccgtt cgcaatcctc gactcccgtg gagctgaaaa aggaagatgc atggctcgta
     2881 ttgccggggt taacatccca tcgaacaagc gtgtggaaat cgcgctcacc tacatccacg
     2941 gaatcggccg gaccacggcc aagaccatcg tcgagaagct cggcatagcc cccgagcggc
     3001 gggtccagga cctttccgac caggaagtcc tccacatccg cgaggcgatc gacagcggcc
     3061 agacggtcga gggcgacctt cgccgcgaga cggcgatgaa catcaagcgg ctgatggacc
     3121 tcgcgtccta tcgcggcctc cgccaccgcc ggggcctccc cgtgcgcggc cagcggacgc
     3181 acaccaacgc ccgcacccgc aagggcaagg cgcggccgat cgccggtaag aaaaagtaag
     3241 cgagtgaccg tccggggggc ggtcgcgaga cacttttccg ccgaaaggcg ggtgaagctg
     3301 ccgcgacgcc ctgaaaaagg ctccaggatt taggaacgag attcaatggc tcaagcccca
     3361 cagcgcctcc gcagaaggga gcgcaagaac atcaccgccg gcgtcgccca cgtaaacgcc
     3421 agcttcaaca acaccatgat caccatcacc gatgcccagg gcaacgcaat cgcgtggagc
     3481 tcggccggga tgatgggctt caagggcagc cgcaagagca ccccttacgc ggcccaggtc
     3541 gccgccgagg acgccggcaa gaaggccgcc gaccacgggg tgcgcaccct cgaggtcgag
     3601 gtcaagggcc ccggatcggg ccgcgaaagt gcgcttcggg cgctccaggc ggtcggcttt
     3661 acgatcacct cgatccgcga cgtcaccccg atcccgcaca acggggtccg gccgagcaag
     3721 cgccgccggg tctaacaggg tcgctccgcc gacgggaaac ggaacccggc ggcgatacag
     3781 gttttgaaaa ggcgggggac gccccgccaa gaggcaggga caacatatgg ccgtcaacgt
     3841 aaagaactgg caggaactga agaagccgaa cgcgctcgag aagaagccgg gcagcggcga
     3901 cagcaagagc cgcgcggtgt tcgtcgccga gccgctcgag cgcggcttcg ggatgactct
     3961 cggcaactcg cttcggcggg tgctcctgtc ctcgctccag ggtgcggccg tcacctcgat
     4021 caagatcgag ggcgcgcttc acgagttcag ctcgctcccc ggagtgcgcg aggacgtcac
     4081 cgacatcgtc ctcaacgtca agcagatcgc gctgaagatg gaaggcgaag gccccaagag
     4141 gctgcagctg tccgccaccg gcccggcgga agtgaccgca gggatgatcg ccaccaccgg
     4201 cgacatggaa gttacgaacc cggacgtcgt catctgccat ctcgacgacg gcgctacgct
     4261 caacatggag ctgaccgcgg acatcggcaa aggctatgtc ccggccgcgg ccaaccggcc
     4321 ggccgatgca ccgatcgggc tgatcccggt cgacgcattg ttctcgccgg ttcgccaggt
     4381 cgcctacaag gtcgagaaca cccgcgtcgg gcaggagctc gattacgaca agctcaccct
     4441 gaccatcgag accgacggaa cggtcacgcc tgaggacgcg ctcgcctatg gcgcgcgaat
     4501 ccttcaggac cagctgcagc tgttcgtcca cttcgacgag agcgcgatgc gcgctgcggc
     4561 gccttcgcag atgatcggtg ccccggcgat ggccgccgag accccggccg acaccaacca
     4621 gctcaaccgc tacctgctta agaaggtcga cgagctggag ctgtcggtgc gcagcgccaa
     4681 ttgcctgaag aacgacaaca tcatctacat cggcgacctg gtgcagaaaa ccgaggcgga
     4741 gatgctccgc accccgaact tcggacgcaa gtccctgaac gagatcaagg aagtgctggc
     4801 ctcgatgggg cttcggctcg ggatggacat tcccggatgg ccgcccgaga acatcgagga
     4861 gatggccaag aagctcgagc aggaaatgct gggctaacca gcggcttaca tcgcgaataa
     4921 cagaagggcc gtcccattgg ggcggccctt ttcgtttgcc gccgccgcgg ctggcggcgg
     4981 cgcgcaacta ctagggcagg acgcgccagt cgcgacggtc actctttcgg gaaactccgt
     5041 cgggggacgg accatttttc gagcgtcggc gccgctccga gccgagcgtc gtaaattgcc
     5101 agtcctcgcc gccaaagtgc gctctgggcg gggcggctcc gaggaagaaa tcgagtaaga
     5161 tttgcaccgt tcgcttcgtt gcgctcatta accaggcgat tatcaggccc aactgcccaa
     5221 ccgggggcgg gtcgctcgcg tcatatattc gcgagttgcg gtagttcgtg cttcgggtcc
     5281 acttcatgga tttgtctcct ttggcgggag ctgaatcgct ccgttcgcaa acggagtgtc
     5341 cgctctttcc aagcagcaag caaacgaata gaattgcgct ttgacatgca aggattgaat
     5401 ggatggatat cgccgcggct cgcactttcc tggagatcgt caagaccgga agcttcgttc
     5461 gcgcggcagc caacctgaac atcacgcaaa ccgctgtaag tgcgcgggtg cgagtgttgg
     5521 aacgggagct cgaccggcag ctgttcgtcc gtaacaaggc gggagcgcgg ctgactcccg
     5581 caggcgacca gttccttcgc cacgcgacga cgctggtggg cgtgtgggag cgcgcccggc
     5641 atgaggtggc tatgccgccg ggccgcagcg aggtggtgac catcggcggg gagcacagcc
     5701 tgtgggaccc gctactgctc gactggctcg tgtggatgcg aagcgagtgc ccggacgtcg
     5761 ccatccgggc gcagatcgac gtctccgaca ggctgatcga tcacgtccag gaaggggtgc
     5821 tcgaccttgc cgttgtttac gctccgccgc agcggacagg gatcgttccc gaactgctac
     5881 aggacgagac tcttgtggcg gtggcgaccg ctgagtcgtc gcaagacgag gtgtatgtcg
     5941 attggggatc cgaatttcgt gcaagccacc atagcgcttt ccccgatgcc gcaaccccag
     6001 cactgacagt cgaccacggg ccgctcgcgc tgcagtacat cctggcggtt ggcggaagcg
     6061 ggtatttccg ggcggaggcg gcgcggccat atcttgaaag cgggcagctt aagctgctcg
     6121 ctggcaaacc gcgattctcc tactcggtct atgcggtcta ttcggccaag gccgacgagc
     6181 ggttgatgga gcgcgtccgg agcggcctcc gtgcggtttc tcgtacatga acaagtttgc
     6241 tattatgtag cgatattatg cgtttgcctt atatggccgc ggacgcgcat atctcggtcg
     6301 aaccacgacc gggatacctt caatggactc ttgccccgcc aatcctgtct ctgaatttga
     6361 gagcgatggc gcgccaacca acaggccgct ggccaagacg cggtcgatcg gtcctttcca
     6421 ggacattccc ggctggatct ggaaaatctt cctgtctgcg tggggaacgc tattcctgat
     6481 ctttgctctg ttcttcacca ccgaccgcgg tgtgacgttc gccattacaa tcgctctttt
     6541 gttcgcaatg atggcgttcg ggctgccgtc ggcgatggcg gcgcagggtc gatgccctgg
     6601 ctacaaatgc cggggcatga tcgcgacgcg ttcgggcgct ctcacccagc gtgccgcggc
     6661 cacgcagata cttctgatcc cggtctcggc agtgcttggc ctcatcgctt tcgtcctgct
     6721 cgcgacgtaa atcgagcgaa gggaatgccg ccggcaaagc tcacgaattc gccccctttt
     6781 ccttgcccgc gcatttccgg attgaaccca aggagattcg cacatgggcg aacgtgagct
     6841 caaccagccg cacgaaggcg acaagcgcta tcagtgaagg ggactaggca gccgctgcaa
     6901 tcgttcgctg taaggtgaag ccttgacttc gcgggcggca tcgggttgag ggacgcggca
     6961 gtggcggggc tggattgcct cgccatttcc atgcagcggg ttggttggcg gtcccgacaa
     7021 aatcgcctgg ccggagctac ctcatacggg ctccagacga acggagaatg agacatgcgc
     7081 catcgagtcg gcggacggaa acttcagcga acctcgagcc accgggcggc gatgttccgc
     7141 aacatggcgg ccgcgctgat caagcacgag cagatcacca ccaccactgc caaggcaaag
     7201 gagcttcgcc cctacgtcga gaagctggtg acgctggcca agaagggcgg gctttcgaac
     7261 cgccggatcg ctcactcgcg gatcatggac gagacccagg agcgcaagct gttcgacgtc
     7321 atcggcccgc gctacgccga ccgcgccggc ggctacaccc gagtgatcaa ggccggcatc
     7381 cgagcgtccg atgcagcggc gatcgcgatc atcgagttcg tcgaccgcga cgtttcggcc
     7441 aagggccagg attcgggacc ggtgatggcc gaggacgaat tcgaggcggc gtaagcttct
     7501 taaatagctg aacaatcgcc gaccggctcg ttcagccgga ttccatctgt tgcgcggtac
     7561 cttcggcacg atcggttcgt tgtgcatttc gaatcgacgt tatcgaagga gcaaggccat
     7621 gaaggctgtt tcgaagattg ccattggcgc ggtcggcttg gccgcgttcg caggcgcatc
     7681 ggccccggcc gccgcgcaat attaccccgg atacggctac ggctatggcc agtacggata
     7741 ttcgccgaat gtcatcggcc aggtgctgca gtcgatcctc aacccctacg ggcagttcgg
     7801 ctatggcggc tatggccgga tacatccgca gaccgcggtc aaccagtgca ccgcggcggt
     7861 gcagcagcgg ctcgcttacc agaaccgcgg ctacggcggt tacggttatg gcggctacgg
     7921 cacctacggt ggctatggcg gctacaacaa cgcccggatc ctcggcatca ctcgggtcga
     7981 gcagcgctcg ccgacgaccc ttcgggtccg cggctatgcg tcgagcggga tgagctacgg
     8041 ctcgccctac ggcggatacg gcggctatag tggcgcctat ggcgggtacg gcggaaccta
     8101 tggcggttac ggccagcagg tcgtcgccga cctgacgttc aagtgcgacg tcgactatcg
     8161 cggctatgtc cgcgacgtgg atatcgaccg ccgccgctaa ccggcgtcgg acggacgaga
     8221 tgagaggcgc cggggttcgc tccggcgcct tttcttttgc gtcggcctgc tgctagtcag
     8281 cgcgcgaaga tgatgagggg acggggacct tgcgcacttt tccgctgctt gccgctttgg
     8341 ctgtgaccgc ctgcaccaca acgaccaacg ctccgctggt cgaggctgcg gaggcgcctg
     8401 tccaagccgc cgacctgccg gcaatcgcct atcccgagac caggcgcatc gacctcgtcg
     8461 aggaccattt cggcgtgaag gtggcggatc cctatcgctg gctggagaac gacgtccgaa
     8521 gcgattccga ggtgcgcgcc tgggtcgatg cccagaaccg cgcgaccgac gcctatctcg
     8581 cgactcttcc tggccgcgac gcgctgaagg cgcggcttac gcagctctac gattacgagc
     8641 gattctgggt accggtgaag aaaggcggcc ggtatttcta cacgcgcaac agcggccttc
     8701 agaaccagtc ggtcctcttt gtccgcgata ccctcgaggg cgaagggcgc gtcctgatcg
     8761 accccaacac atggtcggcc gacggcgcca ccgcgctcgc cgaatggaag ccgaacgacc
     8821 aaggcaccaa gctcctctac gctgtccagg acggcggcac cgactggcgg acgctcaagg
     8881 tgcgggacgt gacgaccggc gaggacctgc ccgacacgat caaatgggcg aagttcaccg
     8941 acctcacctg ggcgaaggac ggttccggct tttactattc gcgttacccc gagcccgcgg
     9001 cggggacggc ctatcagacg tcgagccgcg accagactat ccatttccac aagctcggaa
     9061 ccgcacagtc ggaggacagg ctggtgttcg ccatgcccga ccatcccgag ctttatcacg
     9121 gcaccgggat taccgaggac gggaaatggc tggtcgtttc ctcgtccgag agcgggaacg
     9181 agtaccaggt tgcgctgatc gacctcagcc ggccgggctc gaagccgcgt gtcatcgtgc
     9241 ctgagttcaa ggacatctac ggcttcgtcg gaagcaaggg ctcgaccctc tacttcatca
     9301 ccaacaagga tgcgccgaag ctgaggatcg tcgcgttcga tctcgcccag gcacagctgg
     9361 cggccaagac cgtggtcccc gaagcggagg ccacgctgga caccgcgaag ctggcgggcg
     9421 gaaggctgat cgtcacctat ctcgccgacg ccaagagcga ggtccgggtg cacgagctgg
     9481 acgggtcgct tgtgcggacc atcgacctcc ccgggatcgg caccgcgggc gcgttcaccg
     9541 gcgaggccga cgatcccgag accttttacg ccttcatgag cttcaaccgg ccgacgacca
     9601 tctaccgcta caacgtggcg accggcgagt cctcggcctg ggcaactccg agggtcgcgt
     9661 tcaaccccga ggattattcg gtcgagcagc gattctacgc gtcaaaggac ggcacccggg
     9721 tgccgatgtt catcgtcagg aagaagatcg tgaccggccc ggcgccaacg cttctctacg
     9781 cctatggcgg gttcaacatc gcaatgactc cgagcttctc gtcgagccgg ctggcctggc
     9841 tcgagaaggg cggcgtctat gtgctcgcca acatccgcgg cggaagcgaa tacggcaagg
     9901 catggcacga cgccgggcgg ctcgccaaca agcagaacgt gttcgacgat ttcatcgccg
     9961 ccggcgaata tctgaaagcg aacggcatca catcgcccaa gggcctggcg atcgaggggg
    10021 gatccaacgg cgggctgctg gtcggcgcgg tcgtcaacca gcgccccgac ctgttcgacg
    10081 ccgcacatcc ggccgtgggc gtgatggaca tgctccgctt cgaccgcttc accgagggcc
    10141 attcgtgggt cgacgattac ggctatcccg acaaggaggc cgatttcaaa acgctgctgg
    10201 cctattcgcc gtaccacaac atcaagcccg gcgttcacta cccaccgctg cttgcgacga
    10261 cggccgacac cgacgaccgc gtcgtcccgg gccacagctt caaatatatc gccgcgcttc
    10321 aggccgcgga cccgaacggc gcgccgcacc tgatccggat cgagacccgc gccggccacg
    10381 gatcgggcaa gccgacggcc aagatcatcg aggaagcggc cgacgtctac gcctttctgg
    10441 cgcacttcac cgggcttgga gaataaggcc gccggtcaaa tttcggcgag cacgcctttg
    10501 acgacattgc ttgggattgc gaatccgatg ccgacgttgc ctgcgccgcc gtctgggctg
    10561 aacaaggccg agttgattcc gacgacattg ccttgaaggt cgatcagcgg gccgcccgaa
    10621 ttgcccgggt tgatcggagc gtcggtctgg atgaaccgcc gctggtcatt ggccacgagc
    10681 ggacgggcgg tggcgctgac gattcccgac gtcacggtct ggccgagtcc gaaggggttg
    10741 ccgatcgcga cgacataatc gccaacttcg agtttcgagc tgtcgccgag cgggagctga
    10801 ggaaggtccc gcgcatcgat ctgtaacacg gcgatgtcga gctgcggcgc aagcgccacc
    10861 ggcttggccg ggagctgccg gccgtccttt agcccgacct cgactgcgcg cgcattgcgg
    10921 acgacgtgga agttggtgac gacgaagccg cgcttgccgt cgatgatgac cccggacccc
    10981 gcggatacgg ccggccgaag ggccgcgtcg ggaactccga aatagcggcg gaagaaagga
    11041 tcctggagca gcgggttctg gtccgccggc gagggttgca gaacggcgat tgtaaccacc
    11101 gccggcgccg tcctgctgac caggggcgac agggaaatgt cggagggagg agcgaccagg
    11161 gtgggggccg cttcgccttt cgctgagctt tcgatgggga gcagccgtgc ggcgaatccg
    11221 ccgagcaggg ctgctacgac ggtgcacacg agaagcagga gcaacgaaac gccgggcgag
    11281 cgcgaggggg aagcggccat gcgtcctcaa aacgcacagc gggtgcggcg ttccatgccc
    11341 gctggaaaat ggcgtgtgag aagagttgcg caatgctagg gcagggcgat gcgaacatcg
    11401 gcaaaatgct ggtcgctgat ccttgtggcg ctgtccgcga tgccgctcgg cggatgcgtt
    11461 gcggggctgg ctttgggggc ggccaacatg gcagcctcgg cggcgcatcg gccgggcgca
    11521 agcaacgagc atctcaagcc cgccgcgagg gccgcctgca gcgagcgtgc ggccgctcac
    11581 ggcccagtca acatcatcga cgtcgagcag cgctcggtcg accgtatcgt cgtctggggc
    11641 acggtcgaga cggcgcgggg caagctttcg ttcgagtgcg ggttcaggac cgcgatcgcc
    11701 tatttcaagc ttcgcgagat caagcggcgg cagtagcgct gcgttcgctc cgcgcgtgac
    11761 cttttatcac tcggcagggg ggtagacgat ccttccgtcc tgaacctcgg cgccgggcgt
    11821 gaatcgtgcc ggctcgaccc ggccgctgcc catcaggtga aggacactgc gcccgcgggc
    11881 gaggaggtaa tcggcgatga tccggcgatg gcagcgccac cacaccgctt cggcgcacat
    11941 gattgccgtc cgccgctccg ccgacaggtc cagcaatttt tcgagcgccg cggagaagac
    12001 cgccgacagc gcgtaatcgg cgtaattgtg aaagctctgg ttttcccaat agccgttcac
    12061 ctcgggcgga acctcgcgag cccggccgcg aagcccgccg aggccggcaa tccgggtata
    12121 gccaatctgc caatcggcca gctcgtcgcc gagcgcgtcc tcattgtact gcgggttgcg
    12181 gcgcgacttg gggaccgtgc gcacgtcgac gaccatgtcc gccgggccgc ttcgcagtat
    12241 ctcgacgaac tcggcgatcg accgcgtcga atggccgatg gtgaagatcg gaagcaggtc
    12301 gctcatggtc gaatgaacgc gagagtggca gaatcggtca agtcgccgct acgatgccgg
    12361 gggcaggggg tcgaagagtg gattcgacgc gacggcaaat gctgcagggg atgctcgccg
    12421 cggcggcgat caattggccg gcggcttcac gggcggcttc cccggttccg ataccggtaa
    12481 gcgcgccggg cgagttcgag ccgcaggact atatctggct ggcttgggtg gagcgcggct
    12541 tcttcgggtc tgccccattc agctcggtcg cgctcgaggt gatgaaagtg attacgccgc
    12601 acgtgcgggt ccggctgctc cactccgggc aattgccgcg tccgaccggg cgctgggaac
    12661 cgccgctgct cagcaggcag gagtcggaag ctcgagtgcg ttcgatcctg gcgtcggccg
    12721 gcgtcgatct gagccgggtg gagctgatct ataatgagcg cgtctacgcg tcgatccagg
    12781 atcccggccc gttctttctt cgcacttcga ccggcgggct ggcgcttgcc gactatcatt
    12841 tcaaacatcc cgatccccgc gctgaggcga tcgatcgcac catcgcggcg gagctggggc
    12901 tcccgaccat tcgctccgaa ttggtcagcg aaggcggcgg gcgccagtcg aacggccgcg
    12961 gcacgctgct cctggttcgc gcggtggagc aggctcgcaa tccccgctgg ccgatcgctg
    13021 acatcgagag agagcatctg cggatgcacg gcgccggcaa ggtcgtgtgg ctggagcagg
    13081 ggccggccga tgaggagtgg ggaaagcttg ccgacggccg ctgggggatc ggcaccggcg
    13141 gccatgtcga cgtgttcgca cgcttcgccg attcctcgac agttctgctg gcgcaggtca
    13201 gcccagcgca gcggcggaaa tatccgatcc tggcgcaaac ccatgctcgg atggagcgca
    13261 accatgagct gcttcgagcc gcgaccgacc aggacggcaa gcccttccgg atcctgcgcg
    13321 tgccggtccc cgacccgttg actgcgacgg tgcgatacga cgatctttca ccagaggagc
    13381 ggtcctggtt cgagggatcg cggccgggcg agacgatcga atattacctt cccgccggct
    13441 acctcaattt catcatcgcc aacggcgtgg tggtgactgc caggctccac gagccaggac
    13501 ggccggagcg gcttcgggag acggaccggc aggcgagggc cgcgctgcag cgcgcattcc
    13561 ccggccgcaa gatcgcgcag gtcggagtga ctccgctgct ccatgacggc gcggggcttc
    13621 attgccactc acgcaaccag cccgcgatct aatgctcggc gctatccaac atcggggttc
    13681 ctattgggcg acgataccgc gcggttgcgg catcggcgga caggcgcccg tcggccggag
    13741 tgcctcggca gatcgcagca tctgctcgag attgttaatt tgggcctgaa cgtctgcagg
    13801 gttgaccccc gaatagggcc cggcccggcg cgccgctctc aaccgtttgc ggagctcctc
    13861 gagcgcgtag cgcatcctcg ccatctcggc gtccgcggct gcctggtcac cgcaattgac
    13921 cgccgcaacg taacgggcaa atgcgccgga ataatagttg acgagcggat gcttctcttc
    13981 cttcccttcc ggcgcttcgt cgcgggcggt aggaggtgga ggcggagccg tcgtggtcgt
    14041 cgaagtggct ggcgcgatcc catcctgccc ggcaactccg cgcggctgcg gagtcctggt
    14101 gctggttggt ccaacccatt cccccccgat cactttcgcg ccggtgtcgg cttctaggac
    14161 catttgcaga tcctggccgg caactccgcg catctgcggc cctggcgggc tgccggcagc
    14221 gtgacgcggc tgcggcatcg agggatagcc gacgggtttg ccgtcctggt ttcccggcgg
    14281 cgaatattgg cagatcatcc agtcgtagtt tccaattccg cgctggaccc cgcagcccac
    14341 ggcggtcgta gtcggccaga tcatctgcgt gaaatggccg gccacatacc agtccccggt
    14401 aaggctgatg tcggggaaca ggcccggctt gaaaaagcgg cgctcatcga tccagacttt
    14461 gaccatttgc ccgaccggcg ttccgggaag cgcctgaagc aagttctcgc gagaccattc
    14521 gcggccggct cgcggcgaat gaaccagccg accaatgccg gcgagcgtgt gcacgttgga
    14581 tcgcgcctgt gacgcgagca acgggtccca gacgagaggc cgggccccgt agatcgcgcg
    14641 gatgtcatta tggtttttca ggacttcgac catctggatg tcttcgggct gaatgcagct
    14701 cagtcccggc tggggcggca agccgcgcag tgtaatggtc gatggacttg gtcgggtcag
    14761 cgtaggcact gtagaggcgg ggcaggactt gagcaggtct tcgacccgtt ggcccgcggg
    14821 caaacggtca agctgctcgg cagagacgct ggttatcggg ctcggcgcgt cgagcgatac
    14881 gagcggagga gcaaaagcgg cgagcgtcgc gccggcaagc aaagcggcag ttacacggat
    14941 catttcccct ctccccgcga acgaacaggc tatcgatacc acagagccga gcaatgggca
    15001 gcccaccttg ctttatggca ccggcgtctt cgcggagact ccgcacattc gccgagagtt
    15061 gagtgtcagc gtctcaccgg cggaatacac ccggaagcgg accgcggctt tacagctcaa
    15121 ggcgcacttc ctatccgccc gccatgacgg tccagcccac cgactccatc ctgatcatcg
    15181 acttcggaag ccaggtcacc cagctgatcg cgcggcgcgt gcgcgaggcg ggggtctatt
    15241 gcgagatcgc cccgttcaat gccgcggagg acgcgttcga gcggatgcgg ccgaaaggcg
    15301 tgatcttctc gggcggcccg tcctcggtga tggaggcgga aagcccgcgg gcgccgcagg
    15361 tcatcttcga cagtggcctg ccgctgctcg ccatctgcta cggccagcag acgttgcacc
    15421 agcagcttgg cggcaaggtc gtcagctccg accagcgcga gttcggacgg gcattcatcg
    15481 aggtggtcgc gccctccgcg ctgttcgacg ggctgtggag cgtcggcgag aagcaccagg
    15541 tttggatgag ccacggcgac cgggtagaga gcctggcgcc ggggttcgag gtcgtcgcca
    15601 aatcggaagg cgccccgttc gccattgcca ccgacgaaga ttcgaagcgc tacagcctga
    15661 tgtttcaccc ggaggtggtg cacactccgg acgggggtaa gctgctcgcc aatttcgccc
    15721 gccacatctg cggctgcgca ggcgactgga ccatggcggg gttcagggat gccaagatcg
    15781 ccgagattcg cgaccaggtg ggcgacggca aggtcatctg cgggctttcc ggcggcgtcg
    15841 acagcgcggt ggcggcggtg ctgatccacg aggcgatcgg tgagcagctg acttgcgtgt
    15901 tcgtcgacca cggactgatg cgcgccggcg aggcggagca ggtcgtgtcg ctgttccgcg
    15961 gcagctacaa catcccgctg gtgcacgtcg acgcgagcaa ggatttcctc ggcgggctgc
    16021 agggagtcac cgaccccgag aagaagcgca agttcatcgg cgccgagttc atcaacgtat
    16081 tcgaggccga ggcgaaaacg atcggcgggg cggatttcct cgctcaggga acgctctacc
    16141 ccgacgtgat cgagagcgtc agcttcaccg gcgggccgag cgtaacgatt aaaagccatc
    16201 acaatgtcgg cgggctgccg gagcggatga acatgaagct ggtcgagccg cttcgcgaat
    16261 tgttcaagga cgaggttcgc gagcttgggc gcgagcttgg gctccccgat gcgttcgtcg
    16321 agcgtcaccc tttcccaggg ccggggctgg cgatccgaat cccgggcgag gtgaccgcgg
    16381 agaagtgcga catccttcgc aaggccgaca ccatttacct ggaggaaatc cgcgccgccg
    16441 ggctttacga cgcgatctgg caggcgttcg cggttctcct cccggtgcag acggtgggcg
    16501 tgatgggcga ttaccggacc tacgatttcg tctgcgcgct gcgggcggtg accagcgtcg
    16561 atgggatgac cgcggacgtc tatccgttcg aagccgcttt ccttagccgc gtcgcaactc
    16621 gcatcgtcaa cgaggtgcag ggcatcaacc gcgtggtcta cgactatacg tcgaaaccgc
    16681 cgggaacgat cgagtgggag tgagctgtcg gcttgctagg ccgtttcgga attccctttt
    16741 tcgtgaacga tcttcctttt gaaacctgac agcgcccaca gggtcgcgat ggtggagagt
    16801 gtcagcaaga tcgcgacgtc gtagctgccc agacccactg ccattccgat cgcgccagtc
    16861 acccacaagc tcgcggcggt cgctgtgccc cgcacagaat ccttcatacg caaaatggcg
    16921 ccgccgccga tgaaacccat gccggtgatg acgccttcga cgacccgcgc agtggcctcg
    16981 gggtgtccga cgagcaaatg ttcggcggcc tcgatgaagc cgcaggttgc gaccgcgacc
    17041 aagggaaagg tgcggagacc ggcgctgcgc tcctcacgct ctcggttcca gccgatgggc
    17101 aaggcgagca cataagcgat aaccagcgca gccaggtgcg gcaggacatc gaaaacgttg
    17161 gcttggatca attgcagcgc tcgactcctc aatagtccat cgaattggga agcgaagcgc
    17221 ggcaaccggg gcggggttcc cgaggcgaga gtttttcgcg gttaaccgct aattttgcgt
    17281 ttaccatcgg attgacgaac gcggcggctt cggctgtttt cctgatcgat gaagaccaca
    17341 tccaaattcg tcgccgcggc tctcgcagcc gggctgcttg caagttgctc cacggctccg
    17401 aaccgggtc
//
LOCUS       DATAKH010000203         7783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_19558,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000203 DATAKH010000000
VERSION     DATAKH010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7783
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19558"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..1491
                     /gene="gatB"
                     /locus_tag="VHN55_08500"
     CDS             25..1491
                     /gene="gatB"
                     /locus_tag="VHN55_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEX2804002.1"
                     /translation="MTEFRIKGDTGEWEVVVGLEVHAQITATASKLFSGAATAFGAEP
                     NTQVSLVDAAMPGMLPVPNKECIRQAVRTGMALEAKINKFSRFDRKNYFYADLPQGYQ
                     ISQLYHPLVGEGEVEILLDEQDESSAKSIGIERIHVEQDAGKLMHDQHATMSYVDLNR
                     CGVALMEIVSRPDMRSPAEAGAYLRKLRAILRFVGSCDGNMEEGSMRADVNVSVRKPG
                     GELGTRTETKNVNSVRFVMAVVEHEAKRQIELIETGGAVVQETRLYDPDKGVTRSLRS
                     KEDAHDYRYFPDPDLLPLELDDAFLEECRASLPELPDAKRKRYEALGITPYNASVLTA
                     DVDIARWFDALLETGVEPKAAANWTASEYFGALNRLEKSISESPVTPESAGELLKLVA
                     DGTLSGTLAKQVFEIMLETGKGAGEIVEERGLKQTSDTGEIDRIVDEVLAANADKVEQ
                     YKAGKEQLFGFFVGQVMKAMAGKANPKIVNERLRAKLD"
     gene            1580..2356
                     /locus_tag="VHN55_08505"
     CDS             1580..2356
                     /locus_tag="VHN55_08505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804003.1"
                     /translation="MRKSGIAIAIASSIALSACVQTRQFADLQFTPPQGDYKLLVLRP
                     DVSVGSVTTGGMTEPRADWTEAARTNIIAALKAQQGERGGKLLIAERRGDVPGVDADT
                     VAEIERLNFVVDQSIVLHKYLGVALPTKRRRGLEYTLGEDAVAFGRKTGFDYMLFLHA
                     EDERASTGRVAMQVLGIAGCFIGFCAPSGGQSQLAYASLVDLRTGEVVWFNVLQTGSQ
                     LPGVTFGDIRTPQGAALMVERLLGRMKPGLEIRRQQKAKS"
     gene            2356..3585
                     /locus_tag="VHN55_08510"
     CDS             2356..3585
                     /locus_tag="VHN55_08510"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEX2804004.1"
                     /translation="MCIRCEISRRSVLAGGGALAAATMTGVAQARIKPSDMIPLIGPG
                     YRPTEADEQGLWQQMDRVEEEIAGSNLVIEDEGVRSYVRDLIGKVGGPAAKDMRIYVV
                     RIPEFNAMMFPSGFSVVFSGLLLRMRNEAQLAGVLAHESGHFLRRHMIRQWRDMRRKT
                     DILSIASMAAGVGGAGAGVYMGDYVQLAQLGAILTLFRYSRELEAEADAMGAKLIAEA
                     GYDPVEMSNTWAQLIGEMDASARYRRKHRDRGYGLFDTHPAAESRMADLKVSAAELRV
                     PGRTYETGRARYLRAIAPIRQMLLDDQVKLNDPGASQYVIETLAADGWNGLLRFYEGE
                     VWRLRNRDSLGDARRAEQSYAIAVAYPDAPPEAWRWHGLSLIKQGRKGEGRAALSRYL
                     SMKPDAPDAPFIRQMIG"
     gene            3596..4219
                     /locus_tag="VHN55_08515"
     CDS             3596..4219
                     /locus_tag="VHN55_08515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804005.1"
                     /translation="MNRKIVLLAASLSLALPGCTGMGEGGFSNYYSLVRAREVKVGDG
                     SMTVTPTREWNRQRHVLFDDVKWVEDWTLNGPLLDDLTFVSGLPHGKYLVETNSRDAQ
                     QVPRFHSDMTAPEIQALLESAYRVRGGAVDFRTLSLKPRQFLGHPGFELDYEHLDSDE
                     LWRKGRAVGAVIGGRLYLIMLDAARSHYFPDELDDFEAIVASARLRR"
     gene            complement(4220..4438)
                     /locus_tag="VHN55_08520"
     CDS             complement(4220..4438)
                     /locus_tag="VHN55_08520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804006.1"
                     /translation="MAAFGWARREPIQQQPPETPVPQPPPETPQPTQPGHAEPPPQEA
                     PPPQPDIDVPDPGQPATSPGPAPGQPTG"
     gene            4530..4615
                     /locus_tag="VHN55_08525"
     tRNA            4530..4615
                     /locus_tag="VHN55_08525"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4564..4566,aa:Leu,seq:tag)
     gene            4706..6316
                     /gene="tig"
                     /locus_tag="VHN55_08530"
     CDS             4706..6316
                     /gene="tig"
                     /locus_tag="VHN55_08530"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020819205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEX2804007.1"
                     /translation="MKTVETENEGLKRAFMLTIPAKDISARVDQEVKRMAPQVRMPGF
                     RPGKVPPNLIKKMHGENLERDALSSAVQDGVQKLLEQNKLRPAMQPEVELDEKYAPGK
                     DAEVRVRLEALPEIPKPDISGIKLERLTIEPDEKAVDEQIERLLKTNKGWKDAPKGHK
                     AENGDLVVMDFEGKVGGTPFEGGKGDDMSLELGSGRLIPGFEEQLVGAKAGDKREVTV
                     TFPKDYPAANLKGKEAVFDVTVKQVKLATEAKADDEFAKSLGLDSLDKLREILRDQQG
                     QELNALTRTHMKRRLLDQLAERADFEVPQSMVDAEFENIMQQLRHEASHEPDPKAALA
                     EIEGESDDYRKIAERRVRLGLLLSEIGGANGVEITEPEMNRLIAQAAAQYQPKDRERF
                     IQYVQQEPGAAAQLRAPLYEDKVVDFLFSKAEITDRTATREEVEADLESEEGHVHGPG
                     CGHDVGEAKPKKGAKGKAKAAEAKQPMKTKAEAAPKKAKLTPEKTDKPKPAKPVKSEP
                     SNEAAAEKAAKKDPAKKTPAKKPAKSGK"
     gene            6340..7284
                     /locus_tag="VHN55_08535"
     CDS             6340..7284
                     /locus_tag="VHN55_08535"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2804008.1"
                     /translation="MARSAEPRIAVLLPCFNEEATIGSTVQGFRAALPQATVFVYDNN
                     SADRTRKVAAEAGAVVRSERQQGKGHVVRRMFADIDADVYVMADGDLTYDPEAAPKMV
                     ELLLAEQLDMVVGTRRHQEKDAYRGGHVIGNRVFTGLLARLFGRSFNDIFSGYRVFSR
                     RFVKSFPVLSSGFEIETEMSVHALELTMPVGEVETRYLARPEGSESKLSTFGDGWRIL
                     KTIGTLYRMERPTLFYGAIGGLLLAAALVLSIPLVITYIHTGLVPRLPTAILVTGMTI
                     VAVLCFFAGLILDTVTRGRREMRRLAYLSLDAPPAADA"
     gene            7348..>7783
                     /locus_tag="VHN55_08540"
     CDS             7348..>7783
                     /locus_tag="VHN55_08540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEX2804009.1"
                     /translation="MDHQDIISQLVPIVIEQSNRGERSFDIYSRLLRERIVFITGAVE
                     DHMASLVTAQLLFLESENPKKDIFMYINSPGGVVTAGMAIHDTMQYIRPKIGTVCIGQ
                     AASMGSFLLAAGEPGMRVALSNSRIMIHQPSGGAQGMAADIEI"
BASE COUNT         1514 a         2367 c         2650 g         1252 t
ORIGIN      
        1 tgagggcgag tcctggaaaa cggcatgact gaattccgca tcaaaggcga cactggcgag
       61 tgggaggtcg tggtcggcct ggaggtccat gcgcagatca ccgcgacagc ttcgaagctg
      121 ttttcgggcg ctgcgaccgc cttcggggcg gagccgaaca cgcaggtgag cctggtcgat
      181 gcggcgatgc cggggatgct tccggtgccg aacaaggaat gcatccgcca ggcggtgcga
      241 acggggatgg cgctcgaggc gaagatcaac aaattctcgc gtttcgaccg caagaattat
      301 ttctacgccg accttccgca gggctaccag atcagccagc tctaccatcc gctggtgggc
      361 gagggcgaag tcgagatcct gctggacgag caggacgaga gctcggccaa aagcatcggg
      421 atcgagcgga tccacgtcga gcaggacgcg ggcaagctga tgcacgacca gcatgcgacg
      481 atgagctacg tcgatctcaa ccgctgcggc gttgcgctga tggaaatcgt gtcgcggccc
      541 gacatgcgtt ctccagccga agcaggggct tatttgcgaa agctgagagc gatcctgcgc
      601 ttcgttggct cgtgcgacgg caatatggaa gagggctcga tgcgcgccga cgtcaatgtc
      661 agcgttcgga agcccggagg cgagctgggt acccggaccg agaccaagaa cgtcaactcc
      721 gtgcgcttcg tgatggcggt cgtcgagcat gaggcgaagc gccagatcga actcatcgag
      781 accggcggcg cggtcgtcca ggaaacgcgc ctctacgacc ccgacaaggg cgtcacccgg
      841 tcgctgcggt cgaaggaaga tgcgcacgac taccgctact tccctgatcc cgatttgctt
      901 ccgctcgaac tggacgacgc cttcctggaa gagtgtcggg cgagcctgcc agagctgccg
      961 gacgccaagc gcaagcgcta cgaggcgctc gggatcacgc cgtacaacgc gagtgtgctg
     1021 accgccgacg tcgacatcgc ccgctggttc gacgcgcttc tggagaccgg ggtggagccc
     1081 aaggcggcgg cgaattggac cgcctcggaa tatttcggtg ccctcaaccg gctcgaaaag
     1141 tcgatttcgg agagtcctgt cacgcccgag tcagccggcg agcttctcaa gctggtcgcc
     1201 gatggcaccc tgtctgggac gctcgccaag caggtcttcg agatcatgct ggagaccggc
     1261 aagggcgctg gcgagatcgt cgaggagcgc gggctcaagc agaccagcga taccggcgag
     1321 atcgatcgca tcgtcgacga ggtgctcgcc gccaatgccg acaaggtcga gcagtacaag
     1381 gctggcaagg agcagctgtt cggcttcttc gtcgggcagg tgatgaaggc gatggccggc
     1441 aaggccaacc cgaagatcgt caacgagcgg cttcgggcga agctggactg aacgcgtagg
     1501 ccactcaaaa gcttgcattt ttcggcgaat cgcgttcagt agcgctattg ccgcagtagc
     1561 ggctgcgcgg agtccgtaaa tgcgcaagtc ggggattgct attgccatag cgtcgagtat
     1621 cgccctttcg gcgtgcgtcc agacccgcca gttcgccgac cttcaattca ctccgccgca
     1681 aggggactac aagctgctcg tgcttcggcc cgacgtcagc gtcggatcgg tgacaaccgg
     1741 cgggatgacc gagccgcggg cggactggac ggaggcggcc cgaaccaaca tcatcgccgc
     1801 actgaaggcg cagcagggtg agcgcggcgg caagctcctg attgcggagc gccgcggcga
     1861 cgtccccggc gtggatgccg acaccgtcgc tgagatcgag cggctcaact ttgtggtcga
     1921 tcagtcgatc gtgcttcaca aatatcttgg agtcgccttg ccgacgaagc ggcggcgcgg
     1981 cctcgaatat acgcttgggg aagacgcggt cgctttcggc aggaagaccg gcttcgacta
     2041 catgctcttc cttcacgccg aggacgaacg ggcgtcgacc gggcgtgtcg cgatgcaggt
     2101 tctcgggatc gcgggctgct tcatcggctt ctgcgcgcca agcggcggac agagtcagct
     2161 ggcctatgcg tcgctggtcg accttcgcac cggcgaagtg gtttggttca acgtgctcca
     2221 gacgggaagc cagctgcccg gagtcacgtt cggtgacatc cgaacgcctc agggcgcggc
     2281 gcttatggtt gaacggctct tggggcggat gaaaccgggg cttgagatcc gccggcagca
     2341 gaaggcgaaa agctgatgtg tatccgctgc gagataagcc gccgatcggt gctcgccggc
     2401 ggaggcgcgc tcgccgccgc cacgatgacc ggggtcgcgc aggcccggat caagccttcc
     2461 gacatgatcc cgctgatcgg tcccggttac aggccgaccg aggcggacga gcagggcctg
     2521 tggcagcaga tggaccgggt cgaggaggaa atcgccgggt ccaatctcgt gatcgaggat
     2581 gaaggcgttc ggagttacgt ccgcgacctt atcggcaagg tcggcgggcc ggccgcgaag
     2641 gacatgcgca tctatgtggt gcgaatcccc gagttcaacg cgatgatgtt cccgagcggc
     2701 ttctcggtgg tcttctcggg cctattgctg aggatgcgca acgaggcaca gctcgccggc
     2761 gtgctggcgc acgaatcggg gcatttcctt cgacggcaca tgatccgcca gtggcgcgac
     2821 atgcggcgca agaccgacat cctgtcgatc gcctcgatgg cggccggagt ggggggcgca
     2881 ggggctggag tctatatggg cgattacgtc cagctggcgc agctcggagc gatcctgacc
     2941 ctgttccgct acagtcgcga gttagaggcc gaagccgatg caatgggtgc aaagctgatc
     3001 gccgaggccg gctacgatcc cgtggaaatg tcgaacacat gggcgcaact gatcggcgaa
     3061 atggatgcca gtgcaaggta ccgccgcaag catcgcgacc gcggctacgg cctgttcgac
     3121 actcatcccg cggcagagag ccggatggcc gacctgaagg tcagcgccgc cgagctgagg
     3181 gtgcccgggc gcacctacga gacggggcgg gcccgttacc tgcgggctat cgctccgatc
     3241 cggcagatgc tgctcgacga ccaggtcaag ctcaacgacc cgggcgcgag ccaatatgtg
     3301 atcgagactc tcgccgccga cggctggaac gggctgctgc gattttacga gggtgaggtc
     3361 tggcggcttc gcaatcgcga cagccttggg gacgccaggc gcgccgagca aagctatgcg
     3421 attgcggtcg cctatcccga cgcgccgccg gaagcgtggc gctggcacgg gctgtcgctg
     3481 atcaagcagg gacgcaaggg cgaggggcgg gctgcgctgt cccgctattt gtcgatgaag
     3541 ccggacgcgc cggacgcgcc cttcatccgg cagatgatcg gctgaggagg tggcgatgaa
     3601 ccgcaagatc gtcctgctcg ccgcctcttt gtcgctggcg ctgccgggat gcactggcat
     3661 gggcgaaggg ggcttcagca attattacag ccttgtccgc gcgcgcgagg tgaaggtcgg
     3721 cgacgggtcg atgacggtca cgcccacgcg cgagtggaac cggcagcggc atgtcctttt
     3781 cgacgacgtt aagtgggtcg aggactggac cctcaacggg ccgctgctcg acgatttgac
     3841 cttcgtcagc ggacttcccc acggaaagta cctggttgag accaactcgc gcgatgccca
     3901 gcaggtgccg aggttccact cggacatgac ggctccggaa atccaggcgc ttctcgaaag
     3961 cgcctaccgg gtgcgcggcg gggcggtcga tttccggacc ctgtcgctga aaccccggca
     4021 gttcctgggc catcccggtt tcgagctaga ctatgagcat ctagattccg acgagctgtg
     4081 gcgtaagggt cgcgcggtgg gagcggtgat cggcggtcgg ctctacctga tcatgctcga
     4141 cgcggctcgg tcgcattact ttcccgacga gctggacgat ttcgaggcta tcgtcgcctc
     4201 ggcccggctg cggcgatgat cagccggtcg gttgtcccgg agcgggcccc ggcgaagtgg
     4261 ccggctgccc cggatcgggc acgtcgatat cgggctgcgg cggcggcgct tcctggggag
     4321 gcggctcggc atggcccggc tgggtcggct gcggagtctc cggcggcggt tgcggaacgg
     4381 gcgtttcggg cggttgctgt tggatcggct ctctccttgc ccatccaaac gccgccacct
     4441 ggcggcaagt tgcagggggc aaagagattg agcctgcttg ccccatcggc cagccttgct
     4501 ataggcccgc cacctttcga agagcgtccg cgcgcgtggc ggaattggta gacgcgctgg
     4561 atttaggttc cagtgtccac aagacgtggg ggttcgagtc cctccgcgcg caccattttc
     4621 gcgcacaggc aagccggggg cttgccgagc acgaaaaatc gcccgccggc ggaagaattg
     4681 agttcaagga attgagacag tgacaatcaa gaccgtcgag accgagaacg aaggcctgaa
     4741 gcgcgccttc atgctgacca tcccggcaaa ggacatcagc gcgcgagtcg accaggaagt
     4801 gaagcgcatg gcgccgcagg tgcggatgcc cggcttccgt cccggcaagg tgccgccgaa
     4861 ccttatcaag aagatgcacg gcgagaacct ggaacgcgac gcgcttagca gcgcagtcca
     4921 ggacggagtc cagaagctcc tcgagcagaa caagctacgc ccggcgatgc agcccgaggt
     4981 cgagctcgac gaaaaatatg ctcccggcaa ggatgccgag gtccgggtcc ggctggaggc
     5041 gcttcccgaa atcccgaagc ctgacatcag cgggatcaag ctcgagcggc tgaccatcga
     5101 gccggacgag aaagccgtcg atgagcagat cgagcggctg ctaaagacga acaagggctg
     5161 gaaggacgcg ccgaaggggc acaaggccga gaacggcgac ctcgtcgtca tggatttcga
     5221 aggcaaggtg ggcggcacgc cgtttgaggg cggcaagggc gatgacatgt cgctcgagct
     5281 cggctcgggc cggctcattc ccggattcga ggaacagctc gtcggcgcca aggccggcga
     5341 caagcgcgaa gtgacggtca ccttcccgaa ggattatccg gcggccaacc tgaagggtaa
     5401 ggaggcggtc ttcgacgtca ccgtcaagca agtgaagctc gcgaccgaag ccaaggcgga
     5461 tgacgagttc gccaagtcgc tcggcctcga cagcctcgac aagcttcgcg aaatcttgcg
     5521 cgaccagcag ggccaggagc tcaatgcgct gacccgcacg cacatgaagc ggcggctgct
     5581 cgaccagctc gccgagcgcg ccgatttcga agtcccgcaa tcgatggtcg acgccgagtt
     5641 cgagaacatc atgcagcagc ttcgccacga ggcgagccac gagcccgatc ccaaggcagc
     5701 tctcgccgag atcgagggcg aatccgacga ttaccgcaag atcgcggagc ggcgcgtgcg
     5761 cctcggcctg ttgttgtcgg aaatcggcgg cgcgaacggc gtcgagatca ccgagcccga
     5821 gatgaaccgg ctcattgccc aggcggccgc tcaataccag ccgaaggacc gtgagcgatt
     5881 catccagtac gtgcagcagg agccgggcgc ggccgcgcag ctcagggcgc cgctatatga
     5941 ggacaaggtc gtcgatttcc tcttctcgaa ggcagagatc accgaccgca ccgcgacccg
     6001 cgaggaagtt gaagccgacc tcgagagcga ggaagggcat gtgcacggcc ccggctgcgg
     6061 ccacgacgtc ggcgaggcga agcccaaaaa gggcgctaag ggcaaggcaa aggcggccga
     6121 ggcgaagcag ccgatgaaaa ccaaggcgga agccgctccg aagaaggcga agctgacgcc
     6181 cgaaaagacg gacaagccga agcccgccaa gccggtaaag agcgaaccgt cgaacgaggc
     6241 tgcggccgag aaggcggcga agaaggaccc ggcaaagaag actccggcta agaagcctgc
     6301 caaaagcggc aagtaagcga cgacggcgcc ggggggacga tggccaggtc cgctgaaccg
     6361 cgaattgcag tgctgctgcc gtgcttcaac gaggaagcga caatcggctc caccgtccaa
     6421 ggctttcgcg cggcgctgcc gcaagcgacc gtcttcgtct acgataacaa cagcgccgac
     6481 cgaacgcgca aggttgcggc cgaagcgggg gcggtcgtcc gttcggagcg gcaacagggc
     6541 aagggccatg tcgtccggcg gatgttcgcc gacatcgacg ccgacgttta cgtgatggcg
     6601 gacggcgatc tgacctacga ccccgaagcc gcgccgaaga tggtcgagct tctgctggcc
     6661 gagcagctcg acatggtcgt cggcacccgg cggcaccagg aaaaagacgc ctatcgaggc
     6721 gggcacgtaa tcggaaaccg tgtcttcacc ggccttctcg cccgcctgtt cgggcgcagc
     6781 ttcaacgaca tcttctcggg ctaccgcgtg ttttcgcggc ggttcgtgaa gagctttccg
     6841 gtgctttcga gcggcttcga gatcgagacc gagatgagcg tccacgcgct cgagctgacg
     6901 atgccggtcg gggaggtgga gacgcgctac ctggcgaggc cggaagggtc ggaatcgaag
     6961 ctttcgacct tcggcgacgg gtggcggata ctgaagacga tcgggacctt gtaccggatg
     7021 gagcggccga cattgttcta cggagcgatc gggggcctgc tgctcgcggc ggcgctggtc
     7081 ctgtcgatcc cgctggtcat cacctacatc cacacgggac tggtgccgcg gctgccgaca
     7141 gcgatcctgg taacgggaat gacgatcgtc gctgtgcttt gcttcttcgc cgggctgatc
     7201 ctcgacacgg tgacccgcgg ccggcgggag atgcgacggc tggcgtatct gtcgctggac
     7261 gcgcctcccg cggcagacgc ttgaaccttt cccgcttccg cccgatgtag gctgaggctc
     7321 acaatcacgt taggaccgac acccaccatg gatcatcagg acatcatctc gcagctcgtt
     7381 ccgatcgtca tcgaacaatc gaaccgcggc gagcgcagct tcgacatcta ttcgcggctg
     7441 cttcgcgaga ggatcgtctt catcaccggc gccgtcgagg accacatggc cagcctcgtc
     7501 accgcgcagc tgctcttcct cgagtcggag aacccgaaga aggacatctt catgtacatc
     7561 aactcgcccg gcggtgtggt gaccgccgga atggcgatcc acgacacgat gcaatacatc
     7621 cggcccaaga tcgggaccgt gtgcatcggc caggccgcat caatgggaag cttcctcctc
     7681 gcggcgggcg agccggggat gcgggtagcg ttgtccaaca gccggatcat gatccaccag
     7741 ccgtccggcg gagcccaggg aatggccgcg gacatcgaga tcc
//
LOCUS       DATAKH010000204         7869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_23105,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000204 DATAKH010000000
VERSION     DATAKH010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7869
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23105"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="VHN55_08545"
     CDS             complement(<1..372)
                     /locus_tag="VHN55_08545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804010.1"
                     /translation="MSVVESPARGPQDHHRRWTRLAVAVLLAGAAFPAHADTVETDSD
                     SDQPAQEAQRPDEVLVIGERLFGDIVPDSELDEDAIESYGVSTVDELLAEVQGELGDD
                     EEPLILVNGERMDSLEDIGGFP"
     gene            complement(487..1218)
                     /locus_tag="VHN55_08550"
     CDS             complement(487..1218)
                     /locus_tag="VHN55_08550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804011.1"
                     /translation="MKRAIIAAVALVSTSLTSTITSPAWASDGDDDVILTPVNLDGDY
                     DAQAICDEALRPNPNSGFLTEPTNVSDTGWVNDGDPVRDQNVGDPVPTGTPTASFVII
                     EGGYHRHGGSPNVWGRGNATLTYPNSTQEYTTVQNLVRTVTVDCHVWKVVPGNGNIIE
                     PPGLQTTGNTATDHDSTAGENGFDTNNGPVTLTGQEVDALICISPGKKGGAWTGKNGF
                     AAASCAAASQSAGEEFLPSGNIPQI"
     gene            complement(1474..2097)
                     /locus_tag="VHN55_08555"
     CDS             complement(1474..2097)
                     /locus_tag="VHN55_08555"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX2804012.1"
                     /translation="MTRIILADDHPMIQAAVEAMLRGSDYQLVAKAGTGAEALEAIAE
                     HDPELVVLDIQMPEGSGLDVLRHIRSSDENRPVVLLTASIDEAGFAEALKLKVDGVLL
                     KTSDPALLIDCLDSVRAGDEWIDPHLNAEATRASSARDRSLLSPRETELVKLVRQGMR
                     NRDIAEKLGITEGTVKVYLHSVFEKTGVANRTELAIRAAEWVGNSAS"
     gene            complement(2094..3755)
                     /locus_tag="VHN55_08560"
     CDS             complement(2094..3755)
                     /locus_tag="VHN55_08560"
                     /inference="COORDINATES: protein motif:HMM:NF019350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX2804013.1"
                     /translation="MLLYRWLQLGGGMFDDVLKHRSGRVIALARMVLAAIFLAAIWID
                     PNQPAQAATATYGMLGAYVAAAAAICVVTWNNWWLDAKLAAPAHIVDIAMFTLLVLTT
                     DGYTSPFFVFFVFMILSAAIRWGWRETAQTAVAVILLYFIAGFAGANSTAPNFDLQRF
                     IIRSGNLVILSALLIWFGINHGFSALTPPKDGLLDSLSPEESPLESAVEGAARLTGAS
                     RAVLIWKGAARRQHRVVRFVDGEISTTLLVSSAVKIPTRSFLFDARRNRALCRGPHRR
                     MEFSRSSALLAPEIAADFEIDEGLAVAIRTDAGGGLLLLGGIKALCTDYIEFGDSLGA
                     ALSAHIQSHALLAAVEEGAGARARLSLARDLHDSIVQFLAGATFRIEAIKRSLTSGEQ
                     PERELQDLKELMLQEQQELRTAIGALRTNSLDLPELAADIRDLCSHLGRQWDIACRFS
                     AEVPNVTASTRLHLDTHQLIREAVANAVRHAGAKSVDVRLTADDNDLRLDINNDGSGS
                     GRLEKGKPWSLHERVDEANGTLMLASHETGTSVSITLPLSSEIRP"
     gene            complement(3799..4359)
                     /locus_tag="VHN55_08565"
     CDS             complement(3799..4359)
                     /locus_tag="VHN55_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003040668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2804014.1"
                     /translation="MFARTQRLLLRPGFPEDAPALAAAIADQGIVRNLATAPWPYALR
                     DAEAFLAAPRHPVLPSFVIAERTAGAPRLVGACGLGSRPSGAVELGYWIARPHWGRGI
                     ATEAGLALVEIARALRLPALEASHFVDNPASAQVLVKLGFQPTGITAPRHCCARGEEV
                     LSRLYRLRLDDCESKATAKSEQVLAA"
     gene            complement(4531..4797)
                     /gene="rpmA"
                     /locus_tag="VHN55_08570"
     CDS             complement(4531..4797)
                     /gene="rpmA"
                     /locus_tag="VHN55_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEX2804015.1"
                     /translation="MAHKKAGGSSRNGRDSESKRLGVKLFGSQKARAGNIIVRQRGTK
                     WHPGDNVGIGKDHTLFALTDGTVAFRDGKLGRKYVHVMPAAEAK"
     gene            complement(4804..5370)
                     /gene="rplU"
                     /locus_tag="VHN55_08575"
     CDS             complement(4804..5370)
                     /gene="rplU"
                     /locus_tag="VHN55_08575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006833594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEX2804016.1"
                     /translation="MFAVVRTGGKQYRVAPGDKIVVEKMDGDAGDTVTLGDVLLAGDG
                     ADLKKTDGLKVSAEIIAQAKGDKVTVFKKRRRHNYRRKQGHRQLHTILRIVAIGDHKA
                     PSKPAAEKKAAPKAEKAPAKAEAAQTAAAAESVEAKPAAKPKADKKAAAPAKSEKKAA
                     PAKAKSESTKNAAPAKGAAKKSASKPKK"
     gene            complement(5467..5814)
                     /gene="hspQ"
                     /locus_tag="VHN55_08580"
     CDS             complement(5467..5814)
                     /gene="hspQ"
                     /locus_tag="VHN55_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HEX2804017.1"
                     /translation="MSAAGAYSIPQARFGIGDVVRHRLLDFRGVVFDVDPEFANSEEW
                     YEAIPEPMRPSKDQPFYHLLAENTEASYVAYVSQQNLVHDESDEPVDHPAIVTMFDSF
                     DGERYRLRPEHRH"
     gene            5947..6036
                     /locus_tag="VHN55_08585"
     tRNA            5947..6036
                     /locus_tag="VHN55_08585"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5981..5983,aa:Ser,seq:cga)
     gene            complement(6046..6309)
                     /locus_tag="VHN55_08590"
     CDS             complement(6046..6309)
                     /locus_tag="VHN55_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011906744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5985 family protein"
                     /protein_id="HEX2804018.1"
                     /translation="MTLYDFLSGAVAFGFLTVGLFFLRFWARVHDPLFIWFAIAFSLL
                     GLGQTVLALAGVPLEERSSVYLIRLAAFSLIIFAIFRKNRAGA"
     gene            complement(6314..6589)
                     /locus_tag="VHN55_08595"
     CDS             complement(6314..6589)
                     /locus_tag="VHN55_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011906743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5985 family protein"
                     /protein_id="HEX2804019.1"
                     /translation="MAELFPTVVYTLCFLTSSACAWLLARSFARSGARLLLWSCLCFV
                     LLAANNLILIIDMLVLPDLNLRLARLLFALAAVSVLLFGFVWDLEKE"
     gene            complement(6592..6957)
                     /locus_tag="VHN55_08600"
     CDS             complement(6592..6957)
                     /locus_tag="VHN55_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804020.1"
                     /translation="MTPNDDLSGFIAASFPSVWTLETLLLLKGDRRSWTRPELIGALR
                     ASDLVIDQALDSLVAGGLASLTDDGAAYTPVSASVASLVDQTEKIYRLKPDAVRRMIV
                     TSTASGITAFADAFRLRKD"
     gene            7147..>7869
                     /locus_tag="VHN55_08605"
     CDS             7147..>7869
                     /locus_tag="VHN55_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011906740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX2804021.1"
                     /translation="MNVQSPLEYLDRRQLVSALRALRRGDFSVRLPEEVDGPDGEIAR
                     LFNEVVSLNRDMTTEFERLSQVVGKEGKITQRGRVKNARGGWETAVRSVNELIEDMVQ
                     PTAEVARVIGAVAKGDLSQSMTVEIEGRALRGEFLRIGKVVNTMVEQLASFASEVTRV
                     AREVGTEGKLGGQAKVKGVAGTWKDLTDNVNAMATNLTSQVRNIAEVTTAVASGDLSK
                     KITVEVKGEILELKNTINTMVDQ"
BASE COUNT         1449 a         2427 c         2524 g         1469 t
ORIGIN      
        1 cgggaagccg ccgatatcct cgagcgagtc catccgctct ccgttgacca ggatcagcgg
       61 ctcttcgtcg tcgccgagtt cgccctgaac ttcggccagc agttcatcga cggtgctgac
      121 tccgtagctc tcgatcgcat cttcatcgag ttcgctgtcg ggaacgatgt cgccgaacag
      181 ccgctcgcca atgaccagca cctcgtcggg cctctgcgct tcctgagccg gctggtccga
      241 atcggagtcg gtctcgactg tgtcggcatg tgccggaaag gcggcgcccg ccaggagcac
      301 ggcgacagcg agtcgggtcc agcggcggtg atggtcttgc ggcccccggg ccggcgactc
      361 gacaacggac acggatacgc cccccttaaa acggccaggc tagacaattg ttgttaaagg
      421 aaagcccccg gccttggcgc gatgcctcgg ccaggggcca tccagcggtt gtggccgcca
      481 gctaggttag atctgcggaa tgttaccact cggcaggaac tcttcgcccg ccgactggct
      541 cgcagccgcg cacgacgccg ccgcgaagcc gttcttgccg gtccacgctc cgcctttctt
      601 gccggggctg atgcagatca gcgcatcgac ttcctggcca gtcagggtga ccgggccatt
      661 attggtgtcg aaaccgttct cgccggcagt cgaatcatga tccgtcgccg tgttaccggt
      721 cgtctgaagt cccggcggct cgataatgtt gccgttgccg gggactactt tccaaacgtg
      781 gcaatccaca gtcaccgttc ggaccaagtt ttggaccgtc gtatattcct gcgtgctgtt
      841 cggataggtg agcgtcgcgt tgccacgtcc ccaaacgttc gggcttccgc catggcgatg
      901 atagccgcct tcgatgatga cgaagctggc ggtcggtgtg ccggtcggaa ccggatcgcc
      961 gacattctgg tcgcggacgg gatcgccgtc gttgacccag ccggtgtcgc tgacattggt
     1021 cggctcggtc agaaatccgg agttcggatt cggccgaagc gcttcgtcgc agatcgcctg
     1081 cgcgtcgtaa tcgccgtcca gattaaccgg cgtcagaatg acgtcgtcgt caccatcgct
     1141 ggcccatgcg gggcttgtaa tggttgacgt gagcgacgtg cttaccagcg cgaccgccgc
     1201 gattattgct ctcttcattt gaaaattccc tcgtttcccg gttgagtcac tgaccgccgg
     1261 gatcatgcgc gactcgatcc tcgctgcggt aaaaacgcgt taagcctcag cgagtaagcg
     1321 cgtaacttac caaaggttaa ccgctgttaa gaatttgggc gtgtctcgct ttgatacagc
     1381 tcaaaaacgc ccgaaatgcg ctaattatcg cgcagacttc gaaacgcagg caatgaataa
     1441 gagggcattt tcccccgtcg agtcgccaac cgctcaggaa gccgaatttc cgacccactc
     1501 ggcggcgcgg attgccagct cggtgcggtt ggcgactccc gtcttctcga agacactgtg
     1561 gagatagact ttcaccgtcc cttcggtgat cccgagcttt tcggcgatgt cgcggttgcg
     1621 catcccctgc ctgaccagct tcaccagctc cgtctccctc ggcgagagca gcgaccggtc
     1681 gcgggcgctg ctggcgcgcg tcgcttccgc attgaggtgg gggtcgatcc attcgtcccc
     1741 cgcgcgcacg gaatcgaggc agtcgatcag aagagcggga tccgacgtct tgaggaggac
     1801 accgtcgacc ttcagcttca gtgcctccgc aaagcccgct tcgtcgatcg atgcggtgag
     1861 gaggacgact ggccggtttt catcgctcga tcggatgtgg cgaagcacgt cgagcccgct
     1921 tccctccggc atctggatgt cgaggacgac cagttccgga tcatgctcgg cgattgcctc
     1981 gagagcttcg gcacccgtcc cggccttggc gacaagctgg tagtcgctgc ctcgaagcat
     2041 cgcctcgact gcagcctgga tcatcgggtg atcgtcggcg agaatgatac gagtcacggg
     2101 cggatctccg aactaagtgg cagggtgatc gatacgcttg ttccggtctc gtggctcgcc
     2161 agcatcaacg tgccgttcgc ctcgtcaact cgctcatgga gcgaccaggg cttgcctttt
     2221 tccagccggc cgcttccgct gccgtcattg ttgatgtcca gccgcaagtc gttgtcgtcc
     2281 gcagtcaatc gaacgtccac ggacttggcg ccggcgtggc ggacggcgtt ggcaacagcc
     2341 tcgcgaatca gctggtgagt gtcgaggtga agccgcgtcg atgcagtcac gttcggcacc
     2401 tccgccgaaa agcggcaggc gatgtcccat tgccttccga ggtgagagca gaggtcgcgg
     2461 atgtccgcgg ccagctccgg caggtctagg ctgttggttc gaagcgcgcc gatcgccgtg
     2521 cgaagttcct gctgctcctg gagcatcagt tccttgaggt cctgaagctc gcgttccggc
     2581 tgttcgccgg acgtcagtga tcgcttgatt gcctcgatcc tgaatgtggc tccggcaagg
     2641 aattgtacga tactgtcgtg aaggtcgcgg gcgagggaca gccgggcgcg ggcgccggct
     2701 ccttcctcga ctgcagccag cagggcatgg ctctgaatgt gagcggacag cgcggctccg
     2761 agcgaatccc cgaactcgat gtaatccgtg cacaaagcct tgattccgcc gagcaggagg
     2821 agtccgcctc ccgcgtcggt ccgaattgcc acggcgaggc cctcgtcgat ttcgaagtcg
     2881 gcggcgattt caggagccag gagggcggac gatcgcgaga attccattcg gcgatgcggt
     2941 cctcggcaaa gcgcccggtt tcgccgggca tcgaagagga acgaccgggt cggaatcttg
     3001 acagcggaac tcaccaagag cgtggtgctg atctcaccgt caacgaaccg caccacccta
     3061 tgctgtcgcc gtgccgcgcc cttccaaatg aggacggcgc gcgacgcacc ggtgaggcga
     3121 gcggctccct cgactgcaga ttccagtggc gactcttccg gcgacaggct gtcgagcagc
     3181 ccgtccttcg gcggcgtcag ggccgaaaag ccgtggttga ttccaaacca gatcagcagc
     3241 gccgagagga taaccaggtt accgcttcgg atgatgaatc gctgcaggtc gaaattcggc
     3301 gccgtcgaat tcgcgccggc gaacccggcg atgaaataga ggagaatgac tgcgaccgcg
     3361 gtttgcgcgg tttcccgcca gccccaccga atggcggccg acaagatcat gaaaacgaag
     3421 aagacgaaga acgggctcgt gtagccgtcg gtagtgagca cgagcagtgt gaacatcgca
     3481 atgtcgacga tgtgtgcggg ggcggccagt tttgcgtcca gccaccagtt gttccacgta
     3541 accacgcaga ttgccgccgc cgccgcgaca taggcgccaa gcattccgta ggttgccgtt
     3601 gccgcttggg caggttggtt cggatcgatc cagatcgccg ccaagaagat ggccgcgagc
     3661 accattcggg cgagggcaat gacgcggcct gagcgatgct tgagtacgtc gtcgaacatg
     3721 ccgcccccga gctggagcca gcgatatagc agcaccgcgc gccgcacgga aagagaacta
     3781 ttaaccttcg attccgctct aggcggcgag cacttgctcg gacttggccg tcgccttgga
     3841 ctcacaatcg tccagacgca gccggtaaag ccgcgacaac acttcttcgc cccgagcgca
     3901 gcagtgcctc ggagccgtga tccctgtcgg ctggaatcca agtttgacga ggacctgcgc
     3961 agaagcggga ttatcgacga aatgcgaggc ttcgagcgca gggagccgca gcgcgcgtgc
     4021 gatttcgacg agcgccaggc cggcctcggt cgcgataccg cgtccccaat gcggccgagc
     4081 gatccagtag ccgagctcga ccgcccccga tgggcgcgag ccgagcccgc aggcgccgac
     4141 cagccgcgga gcgcctgcgg ttcgctcggc gatgacgaag gacggcagga cgggatgccg
     4201 gggagccgcc aggaacgcct cggcatcgcg cagggcatag ggccagggcg cagtggcgag
     4261 attgcggacg ataccctggt cggcaatcgc cgcggcaagc gccggcgcat cttccggaaa
     4321 accgggccga agcagcaatc tttgtgttcg cgcgaacatc gccttctcct cgccggccgc
     4381 cctagcggcg gcaggtgaca gtttcgggag aaggcaaaga aaaagggggc tccccttttg
     4441 cggggggacc cccttctccc atttggcttt gatctggcta gatctcgtcc gggccgcccc
     4501 cttgtgggaa cggtcccgtt ctgaccgttc ctatttcgct tccgctgccg gcatgacgtg
     4561 cacgtatttg cggccgagct ttccatctcg gaacgcgacg gtgccgtcgg taagcgcgaa
     4621 caaggtgtga tccttgccga tgccgacgtt gtcgcccggg tgccacttgg tgccgcgctg
     4681 gcgcacgatt atgttgccgg cgcgagcctt ctggctgccg aacaacttca cgccgaggcg
     4741 cttgctctca ctgtcgcggc cgttgcggga cgagccgcct gctttcttat gtgccattgt
     4801 cggttacttc ttcggcttgg atgctgattt cttggccgcg cccttagcag gtgcagcatt
     4861 ttttgtcgat tcgctcttgg ccttggccgg cgcggctttc ttttccgact ttgccggagc
     4921 ggcagccttc ttgtccgcct tcggcttggc cgccggcttc gcttcgacgc tttcggcagc
     4981 cgccgcggtt tgcgctgctt cggccttggc cggagccttt tcggccttcg gagcggcttt
     5041 cttttccgcc gccggcttcg acggagcctt gtgatcgccg atcgcgacga tccgcaggat
     5101 cgtgtgcagc tggcgatggc cctgcttgcg gcggtaattg tggcgccggc gcttcttgaa
     5161 cacggtcacc ttgtcgccct tggcctgggc gatgatctcg gcggagacct tgagtccgtc
     5221 ggtcttcttc aggtccgccc cgtcgccggc aagaagcaca tcgccgaggg tgacggtgtc
     5281 accggcgtct ccgtccatct tctcgacgac gatcttgtct ccgggggcga ctcggtattg
     5341 cttgccgccc gtgcgcacga ctgcgaacat tggctctctt cttcaaaatc ggtgacgcgc
     5401 gcaacgggcg caaggcccct ggcgcgcgaa agcgagccgc ctatggcagc ggctcccgcc
     5461 tgtcaactaa tggcggtgct cgggccggag ccggtatcgc tcgccgtcga agctgtcgaa
     5521 catggtaacg attgccgggt ggtccacggg ctcgtcgctt tcgtcgtgaa ccaggttctg
     5581 ctggctgaca taagcgacgt aactcgcctc cgtgttttcc gcgaggaggt ggtagaaggg
     5641 ctggtccttc gatggccgca tcggttccgg aatcgcttcg taccattctt cgctgttggc
     5701 gaattccgga tcgacgtcga aaacgacgcc tcggaagtcg agaaggcgat ggcgcacgac
     5761 gtcgccgatc ccgaagcggg cctggggaat tgaataggcg ccagcggcac tcatatcggt
     5821 caaacgttcg atcggtgaca tggctgcaat ctagggaatc gcgcaggcta ggcaaggtcg
     5881 gggtccattg ctacatggcc gcccgcgacc gctgccgggc atccggcacg aaccttcacg
     5941 aaatgcggag aggtggctga gtggtcgaaa gcaccgcact cgaaatgcgg cgtgcgggca
     6001 accgtaccgt gggttcgaat cccaccctct ccgccattca gaccctcacg ccccggcgcg
     6061 gttcttccgg aaaatcgcga agatgatcag ggagaatgcg gcgagccgga tcagatagac
     6121 cgagcttcgc tcctcgagcg gaacgccggc cagggccagc accgtttgcc ccagtccgag
     6181 cagggaaaag gcgatcgcga accagatgaa gagcgggtcg tgaacgcgcg cccagaagcg
     6241 caggaagaac agcccgacgg taagaaagcc gaacgccacg gcgccggaga ggaagtcata
     6301 gagcgtcatt ccgtcactcc ttctccagat cccagacaaa tccgaacaac aggacgctga
     6361 cggccgccag tgcaaagagc agtcgcgcga ggcgaaggtt gagatccggg agcacgagca
     6421 tgtcgataat gaggatgagg ttgttcgctg cgagcaagac aaagcagaga cagctccaca
     6481 gcagcagccg cgcgccgctt cgggcaaagc ttcgcgccaa cagccaggcg cacgcgctgc
     6541 tcgtcaggaa gcagagcgtg tagacgacag tcgggaacaa ctcggccata ctcagtcctt
     6601 ccgcagccgg aatgcatcgg cgaaagcagt gattccgctg gccgtcgacg tgacgatcat
     6661 ccgccgaacg gcatcgggct tgagccggta aatcttctcg gtttggtcaa ccagcgaagc
     6721 gacggatgcg gataccggcg tgtacgcggc gccatcgtcg gtaaggcttg cgagtccccc
     6781 ggcgacgagc gagtcgaggg cctggtcgat tacgaggtcg ctggctcgaa gggctccgat
     6841 caactcgggc cgagtccatg aacgccgatc gcccttcagc agaagaagcg tctccagtgt
     6901 ccagacggac gggaagctgg cggcgataaa gccggaaagg tcatcgttgg gggtcactgc
     6961 gaaaggggaa aacctcaaaa aatcttcgcg cgtcctaccg agccgggcta tcgagaatca
     7021 acccgtgggc gtgccggcgc ttaatttttc atcaagcgta aagcatttcc tctggtaatg
     7081 acgattgaac agcagccggg gggctgcgcc aaccaggtgg ggggagaagc gacgacggag
     7141 agctgagtga acgtccagtc ccccctcgaa tatctcgacc gcaggcagct tgtatccgcg
     7201 ctgcgggcgc tcaggcgcgg cgacttcagc gtccgccttc cggaggaagt tgacgggccc
     7261 gatggcgaga ttgcccggct cttcaacgaa gtcgtctccc tcaaccgcga catgacgacg
     7321 gagttcgagc gcctgtcgca ggtggtcggc aaggaaggaa aaatcaccca gcgcggacgc
     7381 gtcaagaacg cccgcggcgg ctgggagacg gcggttcgct cggtcaacga gctcatcgag
     7441 gacatggttc agccgacggc ggaggtcgcc cgggtcatcg gcgcggtggc gaaaggcgac
     7501 ctttcccagt cgatgaccgt cgagatcgag ggtcgggcgc ttcgcggcga attccttcgc
     7561 atcggcaagg tcgtcaacac gatggtcgag cagctggcgt ccttcgcgtc ggaggtgact
     7621 cgagtggcgc gcgaggtggg aaccgagggc aagctcggcg gccaggccaa ggtgaaggga
     7681 gtcgccggaa cctggaagga cctcaccgac aacgtcaacg ccatggcgac caacctgaca
     7741 tcgcaggtgc gcaacatcgc cgaggtgacg acggcggtcg cttccggcga cttgtcgaag
     7801 aaaatcaccg tcgaggtgaa gggcgagatc ctggagctga agaacaccat caacacgatg
     7861 gtcgaccag
//
LOCUS       DATAKH010000205         5559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_28945,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000205 DATAKH010000000
VERSION     DATAKH010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5559
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28945"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1701)
                     /gene="phaC"
                     /locus_tag="VHN55_08610"
     CDS             complement(<1..1701)
                     /gene="phaC"
                     /locus_tag="VHN55_08610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HEX2804022.1"
                     /translation="MADETDTGPMPSLEDWQHWTWVMGRAQQMLMEAWAESLKTSQPW
                     PTSPPAWGAFPPAFFGGAPASAADPVSMMSAGAEAWSKGLEAWGQMMGLDSTPAEKKD
                     RRFAAPEWHDNPLFDQIRQTYLALSDKLLGTVDRIEGLDEDSRSRLRFATRNFVDAMS
                     PSNFALTNPQVLKKTIETRGENLLKGLANMLKDIAAGQLTQTKPGVFEVGRNLATTPG
                     KVIKETPLYQLIHYTPTTPEVLETPVVIFPPWINRFYILDLSPEKSFVKWCVDNGISL
                     FMVSWKSADESIADATLDDYVLRGQLDAIDTIRDLLDVKSVHAIGYCVAGTTLAAALG
                     YLHAKKDEKKVASATFLTAQVDFTLAGDLKLFTGPETMALLEKLTAEKGYLDGRYMAA
                     TFNLLRGRDLIWSYVVNNYLLGEEPPPFDLLYWNSDTTNLAATWHRAYLSDLYEANKL
                     AAKGGIEVAGTPIDIDRVKTPTYIQAGREDHISPPESVWKIMDHFAGPKRFVLAGSGH
                     IAGVVNPPAARKYCYWSNDEPAETLEAFIDGAAEHKGSWWPDWLDWLKAQAPKRVKAE
                     G"
     gene            1724..2344
                     /locus_tag="VHN55_08615"
     CDS             1724..2344
                     /locus_tag="VHN55_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HEX2804023.1"
                     /translation="MTATTHLPAALVLLDYFGIAVFAVTGALVAAEKKQTLVTFIFFA
                     VATGVGGGTLRDLLIGAPVFWVHTNGTLLICIAAALLVWAASRRRLAGAAILWFDAAG
                     LAAYAAYGGAKALLYGVAPVPAFAMGVLTACAGGIVRDVLAGEPSILMRPELYVTAAA
                     LAAGLVVALTLAGFYVWAAVAVAAIAGFALRGIAIVRGWSLPTYRG"
     gene            2354..2836
                     /locus_tag="VHN55_08620"
     CDS             2354..2836
                     /locus_tag="VHN55_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007711152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2721 domain-containing protein"
                     /protein_id="HEX2804024.1"
                     /translation="MIPIPPPETRVTEIADIIQSVLAPVFLLAGIGGFLNVLTGRLAR
                     MVDRARNIEPKLLKSRASEHDRLLRELRLIDRRMALVGRAIWLTVLAALLICFVVILL
                     FAGTLVSGHFGRAIAVLFMLCMLFLGSGFAFFLVETRIGARAVRIRNALLEHEAEERD
                     "
     gene            2900..3898
                     /gene="glpX"
                     /locus_tag="VHN55_08625"
     CDS             2900..3898
                     /gene="glpX"
                     /locus_tag="VHN55_08625"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HEX2804025.1"
                     /translation="MNRESVQGSSVLDRVLVLEMVRVTEAAAIAASKWIGRGDNDSAD
                     AAAVEAMRKELNELPMDGTVVIGEGERDEAPMLYIGEKVGSAQDGGPKIDIALDPLEG
                     TTITANAGPNALAVLAIAESGCLLYAPDTYMEKLAVGPGYPKGIIDLQKPVADNIRAI
                     AKEKGVQPNEIIACVLDRPRHAEIIAQLRELGCGITLIPDGDVAGVIATTDPDTSIDV
                     YIGTGGAPEGVLAAAALRCVGGQMQGRLVFRNDDEVTRARRCGIDDLDRVYHLEDMAK
                     GDCIFAATGVTDGSLLQGVHRRKACVTTQSLVMRASSGTIRRVSAEHYKFGSQRSL"
     gene            3931..4437
                     /locus_tag="VHN55_08630"
     CDS             3931..4437
                     /locus_tag="VHN55_08630"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEX2804026.1"
                     /translation="MGDALDHGYDGSGQLPLLAVEPAYKNVLRSRFLVQWVALSAVAV
                     VVDQTLLSEGSFHGLPSTLVPLLGIISLVVVPQRIYGHLGYRIAERLLQVVRGWMFHT
                     DTLVPFVRVQHIDVTQGPLEKLFGVATLVVHTAGTHNSVVTVPGLAPQRAAEIRDIIR
                     EHVRTDLE"
     gene            4434..>5559
                     /locus_tag="VHN55_08635"
     CDS             4434..>5559
                     /locus_tag="VHN55_08635"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEX2804027.1"
                     /translation="MTDDIAVGEPERLHPLFLLTGLGGAVRGVFGAYAVIGYLAVTGR
                     LGTALFAAAAFLAFGAAGVLLYWRRFEYRVGASEIRIDSGIISRTHRSIPFDRVQDVD
                     ITQGPVARVLGIAQVRFETGASAGKEEGVLQAIRLERAHQLRELVRARRAPVVEARST
                     AADAPPAVYAMDISRLFLSGAFNFSLAVFAALLGLTQTVGDFIGFDPLSRSFWRSVDS
                     FSGTIAQLVLANRLFTAVAGVVTLVVVGIATGVIRTVLRDYGFRLDRTETGLRRRRGL
                     LSLTDVTLPVARAQAAIVGTGPVRDNFGWRDLKLQSLARDQGGSGDHVLAPLAHDEEV
                     AAILSALGWRTLPARIAWNRVSPAYVWTLALALAPLLLIAI"
BASE COUNT          874 a         1837 c         1784 g         1064 t
ORIGIN      
        1 gccttccgcc ttcacgcgct ttggcgcctg cgccttcagc caatcgagcc agtccggcca
       61 ccagctgccc ttgtgctcgg cggctccgtc aatgaaggcc tccagcgtct ccgccggctc
      121 gtcattgctc cagtagcaat atttccgcgc cgccggcggg ttcaccacgc ccgcgatatg
      181 gcccgagccg gcaaggacga agcgtttggg cccggcgaaa tggtccatga tcttccacac
      241 gctctcgggc ggggagatat ggtcctcgcg cccggcctgg atgtaggtgg gggtcttaac
      301 ccggtcgatg tcgatcggcg ttccggcgac ctcgatcccg cccttcgcgg ccagcttgtt
      361 cgcctcgtaa aggtcgctca ggtacgcgcg gtgccaagtg gccgccaggt tcgtcgtgtc
      421 cgagttccag tagagcaggt cgaacggcgg cggctcctcg cccagcaggt aattgttgac
      481 gacatagctc cagatcaggt cgcggccgcg cagcaggttg aaggtggcgg ccatgtagcg
      541 gccgtcgaga tagcctttct ccgcggtcag cttctcgagc agcgccatcg tctcggggcc
      601 ggtgaagagc tttaggtcgc cggcgagggt gaaatccacc tgggcggtca ggaaggtcgc
      661 cgacgcaacc ttcttctcat ccttcttggc atggagatag ccgagcgccg cagcgagcgt
      721 cgtgccggcg acgcaatagc cgattgcatg gaccgactta acgtcgagca agtcgcggat
      781 cgtgtcgatc gcgtccagct gcccccggag cacgtagtcg tcgagagtcg cgtcggcgat
      841 gctctcgtcg gcggatttcc agctgaccat gaacagcgaa attccgttgt cgacgcacca
      901 tttgacgaag ctcttctcgg gggaaaggtc gagaatgtaa aagcggttga tccacggggg
      961 gaagatcacc accggcgttt ccagcacctc cggcgtcgtc ggcgtataat ggatcagctg
     1021 gtatagcggc gtttccttga tcacctttcc cggagtcgtg gcgaggttgc ggccgacttc
     1081 gaacacgccg ggcttggtct gcgtcagctg gcccgcggcg atgtccttga gcatgttggc
     1141 aaggcccttg agcaggttct cgcccctggt ctcgatcgtc ttcttcagga cctgcgggtt
     1201 ggtcagcgcg aaattggacg ggctcatcgc gtcaacgaag ttacgggtcg cgaaccggag
     1261 cctggagcgg ctgtcctcgt ctagcccctc gatccggtcg accgtcccga gcaacttgtc
     1321 cgaaagcgcg agataggttt ggcggatctg gtcgaacagc gggttgtcgt gccattcggg
     1381 agccgcgaag cgacggtcct ttttctccgc gggcgtgctg tcgaggccca tcatctggcc
     1441 ccacgcctcg agtcccttcg accacgcctc ggcgcccgcg ctcatcatgc tcaccggatc
     1501 ggcagcggac gccggagcgc caccgaagaa ggccggcgga aaggcccccc aggctggcgg
     1561 gcttgtcggc cagggctgcg atgtcttgag gctttccgcc cacgcctcca tgagcatctg
     1621 ctgggcgcgg cccatgaccc acgtccagtg ttgccagtcc tcgagactgg gcatcggccc
     1681 ggtatcggtt tcgtccgcca tctggcccat gtaatgacgg ctgatgaccg cgactaccca
     1741 cctcccggca gcgctcgtgc tgctcgacta tttcggaata gcggtcttcg ccgtcaccgg
     1801 ggcgcttgtc gccgctgaaa agaagcagac gctcgttacc ttcatcttct tcgcggttgc
     1861 cacgggagtc ggtggcggga ctttgcgcga cctcttgatc ggcgcacccg tattctgggt
     1921 ccataccaac gggacactgc tcatctgcat cgctgccgca ttattggttt gggcggccag
     1981 ccgccgacgg ttggcgggcg ccgcaatcct gtggttcgac gctgcagggc tggccgctta
     2041 tgcggcctat ggcggcgcca aggcgctgct ttacggggta gcgccggtcc cggctttcgc
     2101 gatgggcgtg ctcaccgcct gcgccggcgg catcgtccgc gatgtgctgg ccggggaacc
     2161 ttcgatcctg atgcggccgg agctctacgt gaccgccgcc gcgctcgctg caggcctggt
     2221 ggtcgccctg acacttgccg gattctatgt ctgggccgct gttgccgtcg ccgcgatcgc
     2281 cgggttcgcg cttcgcggaa tcgccatcgt ccgcggctgg tcgctgccca cctatcgcgg
     2341 ctagggtgca gcgatgatcc caattccgcc gcccgaaact cgagtgacag agatcgccga
     2401 catcatccag tcggtcctcg cgccagtttt cctgctcgcc ggcatcggag gtttcctcaa
     2461 cgtcctgact ggacggcttg cgcggatggt ggaccgcgcc cgcaacatcg aacctaagct
     2521 tcttaagagc cgcgcttccg agcacgaccg gctgcttcgg gagttgcgac taatcgatcg
     2581 gcggatggcg ctggtcggcc gtgcgatctg gctgaccgtc ctcgccgccc ttctcatctg
     2641 ctttgtcgtc atattgctgt tcgccggcac gctcgtcagc ggccacttcg gccgggccat
     2701 cgcggtcctg ttcatgctgt gcatgctctt cctcggcagc ggcttcgctt tctttcttgt
     2761 cgagactcga atcggcgccc gggccgtgcg catccgcaac gcgctgctgg agcacgaggc
     2821 cgaggagcgc gactgactct cgacagtgcg gcgggccgct cctatcgcgc tgcaatccaa
     2881 ccgggagttt ctaaaagcaa tgaaccgcga atccgtccaa ggctcgtccg tcctcgaccg
     2941 agtgctcgtc ctcgaaatgg tgagagtgac cgaggcagcg gcgattgcag cgtcgaaatg
     3001 gatcggccgc ggcgacaatg actcggccga cgcagccgcc gtcgaggcga tgcgcaaaga
     3061 gctcaacgag ctgccgatgg acggcaccgt cgtcatcggc gagggcgagc gcgacgaagc
     3121 gccgatgctc tatatcgggg agaaggtcgg ctccgcccag gacggagggc cgaagatcga
     3181 catcgcgctc gaccccctcg aaggaacgac gatcaccgcc aacgccgggc ccaacgcact
     3241 ggcggtcctc gccatcgccg agagcggctg cctgctctac gctcccgaca cctacatgga
     3301 gaagctggcc gtcggcccgg gctatcctaa gggaatcatc gaccttcaaa agcctgttgc
     3361 cgacaacatc cgggcgatcg cgaaggaaaa aggggtccaa cccaacgaga tcatcgcctg
     3421 cgtcctcgat cggcctcggc acgccgagat aattgcgcaa ctccgagagc tcggctgcgg
     3481 gatcacgctc attcccgacg gcgacgtcgc cggagtgatc gcgacgaccg accccgacac
     3541 cagcatcgac gtctatatcg gaaccggagg cgcgcctgag ggcgtgctcg cggccgcggc
     3601 gcttcgctgc gtcggcggcc agatgcaggg ccggctggtg ttccgcaacg acgacgaggt
     3661 cacccgggcg cgccgctgcg ggatcgacga cctcgaccgg gtctaccatc tcgaggacat
     3721 ggccaagggc gactgcatct tcgcggctac cggagtgacc gacggctcgc tgctccaggg
     3781 cgtgcatcgc cgcaaggcgt gcgttaccac ccagagcctg gtgatgcggg ctagctcggg
     3841 aacgatccgc cgcgtttccg ccgaacatta caaattcgga agccagcgca gcctctagac
     3901 ccgacgcccg ctttctctaa agtcgaaggc gtgggggacg cgcttgatca cggctacgat
     3961 ggctcggggc agctgccgct gctagcggtc gagcctgcct acaagaatgt gcttcggtcg
     4021 cggttcctgg tccagtgggt cgcgctttcg gcggtcgcag tggtcgtcga ccagacgctc
     4081 ctgtccgagg ggagctttca cggactgccg agcacgctcg ttccgctgct cggcattatc
     4141 tccctggtcg tggtcccgca gcgcatctac ggccatctcg gctatcggat agccgaacga
     4201 ctcctccagg tcgtccgcgg gtggatgttt cacaccgaca cgcttgtccc gttcgttcgg
     4261 gtgcagcata tcgacgttac ccaagggccg ctcgagaagc tgttcggagt ggcgactttg
     4321 gtcgtccaca ccgccggaac ccacaacagc gtggtcacgg ttccggggct ggcgccccaa
     4381 cgcgcagccg agatccgcga catcatccgc gagcacgtgc gcacggatct ggaatgaccg
     4441 acgacatcgc cgtaggtgag cccgagcgcc ttcacccgct gttccttctg acgggacttg
     4501 gaggcgcagt ccgcggcgtt ttcggcgcct atgcggtcat cggctacctg gccgtaaccg
     4561 gccgcctcgg caccgccttg ttcgcggctg cagccttcct cgccttcggc gccgctggcg
     4621 ttctgctcta ctggcgccgc ttcgaatatc gcgtcggagc cagtgagatc cggatcgaca
     4681 gcgggattat cagccgaacg catcggtcga taccgttcga ccgggtccag gacgtcgata
     4741 tcacccaggg accggtcgcc cgggtgctcg gtatagcaca ggtcagattc gagaccggag
     4801 cgtccgcggg taaggaggag ggagtgctcc aggcaatccg gctggagcgc gcccaccagc
     4861 tccgcgagct ggtacgcgct cgtcgtgcac ctgttgtcga ggcccgctcc accgcagctg
     4921 acgcgccgcc ggccgtatat gccatggaca tatcccggct gttcctcagc ggtgctttca
     4981 acttctcact agcggtgttc gccgcgttgt tgggactgac ccagactgtc ggcgatttca
     5041 tcggcttcga tccgctcagc cggtccttct ggcggtccgt ggacagcttc agcggtacaa
     5101 tcgcacagct cgtcctcgcg aaccggctgt tcaccgctgt cgcaggcgtt gtgacattgg
     5161 tcgtcgtcgg gatcgcgacc ggcgtgattc ggaccgtcct tcgagactat ggattccggc
     5221 tcgatcgcac ggaaaccggc ctaaggcgcc gccgcggcct gctcagcctg acggatgtca
     5281 cactgccggt cgcgcgggcg caggcggcga tcgtcggaac agggccggtc cgcgacaatt
     5341 tcggctggcg cgatctaaag ctccagagcc tcgcccgcga ccagggtggg agcggcgacc
     5401 atgtcctcgc tccgctcgcg catgacgagg aagttgcggc catcctgtca gcgctcggat
     5461 ggcggacgct tccggcgcgc attgcctgga acagggtgtc gcccgcttat gtctggacgt
     5521 tggcgcttgc gctggctccg ctgctcctga tcgcgattg
//
LOCUS       DATAKH010000206         2285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26298,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000206 DATAKH010000000
VERSION     DATAKH010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26298"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VHN55_08640"
     CDS             complement(<1..222)
                     /locus_tag="VHN55_08640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX2804028.1"
                     /translation="MAEAKVLAASEPRAAWTLAAQLGEGPVWVERDRAFWFVDIKGKA
                     IHRYDPADGSRRSWGAPEQVGFVLPAERGG"
     gene            351..746
                     /locus_tag="VHN55_08645"
     CDS             351..746
                     /locus_tag="VHN55_08645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804029.1"
                     /translation="MKPALPTLACAICALALAACNSEQPRQPAANDAAADAEANPNAN
                     VDLSKVELPPPVVRSLAFRCTDGNELFVEVLEGEKAVLVRDKAGEPPAKLTREGGSGA
                     FTGDDRTLSGIGDVATYSSPDRPNQRCGQ"
     gene            941..1156
                     /locus_tag="VHN55_08650"
     CDS             941..1156
                     /locus_tag="VHN55_08650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008832912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX2804030.1"
                     /translation="MPTGTVKFFNESKGFGFIQPEDGGPDSFVHISDVERSGMSTLRE
                     GQRVSYDVEDDQRGKKKACNLRDAGGE"
     gene            complement(1322..>2285)
                     /locus_tag="VHN55_08655"
     CDS             complement(1322..>2285)
                     /locus_tag="VHN55_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEX2804031.1"
                     /translation="MGLIKEGDKFAILSDILGDEDHLGDMDFKVAGITEEIMKTALAQ
                     AKDGRAHILGEMAKALPDVRTELSEHAPRIETMQIPKDKIREVIGTGGKVIREIVAET
                     GAKVDIDDEGVIKISSSDLSQIEAARQWIHGIVAEPEPGTIYTGKVASIVDFGAFVTF
                     MPGKDGLVHVSEIKNERVENVRDVLEEGQEVKVKLLEVDQRGKVRLSMRLVDQETGEE
                     LPDTRPPREPREGGDRGPRGDRGDRGRGRGPRREGGGGDRGGRGGDRDRGPRGEGRGD
                     RGPRRDREDRGGDDRHSQPSRGEGENGDGEPKFAPAFLTGDDND"
BASE COUNT          365 a          803 c          727 g          390 t
ORIGIN      
        1 accgccgcgt tctgccggaa gcacgaagcc gacctgttcc ggagcgcccc agctgcgcct
       61 ggagccgtca gccgggtcgt agcggtggat tgccttgccc ttgatgtcga cgaaccagaa
      121 ggcgcggtcg cgttcgaccc acaccggccc ttcgccaagc tgggcggcga gggtccacgc
      181 cgccctcggc tcgctcgccg ccaagacctt cgcttcagcc accgcccagg tccaccagcc
      241 gcctcctcgc ttcccgatct atatcgcctg ggacgccgcg agccagcccg gggttgcccc
      301 gaaccgcccg gcacccctat cgtccggtag cacaacagga ggagaagctc gtgaaacccg
      361 cacttccgac ccttgcctgc gcgatctgcg cgcttgcgct cgccgcctgc aacagcgagc
      421 agccgcgcca gccagcggcg aatgacgcgg ccgccgacgc ggaggcgaac cccaacgcca
      481 acgtcgacct aagcaaggtc gagctgccgc cgcccgtcgt ccgcagcctc gccttccgct
      541 gcaccgacgg aaacgagctt ttcgtcgagg tcctggaagg cgaaaaggcg gtgctggtca
      601 gggacaaggc gggcgagccg ccggccaagc tgacccgcga aggcggctcc ggagccttca
      661 ccggcgacga ccgcacgctg agcggaatcg gcgacgtcgc cacttattcc agcccggacc
      721 ggccgaacca gcgctgcggc cagtgaccgg ctgaccgcct tcgggcgcgg cgacaagcga
      781 acagccatta gtgccggcgc ccggtttgag ctatgggtgc cgtcgctacc ggtcgcaaac
      841 ggacgggact ggcgctttgc ggctcctttt tccttctctg tcgttggcca tggcaccgaa
      901 ggtccggaac agtccgggcc aaacatggga aagacgaaaa atgcccacag ggacagtcaa
      961 gttcttcaat gagtccaagg gattcggttt catccagccc gaggacggag gcccggattc
     1021 gttcgtccac atctccgacg tcgagcgttc ggggatgagc acgcttcgcg aaggccagcg
     1081 agtctcctac gacgtcgagg acgaccagcg cggcaagaaa aaggcctgca acctgcgcga
     1141 cgccggcggc gaatagccgc aaggcggcga gcagccgcaa aaagggaggc gtcctgaaga
     1201 gggcgcctcc tttttatggc tggctgggat accggtttgc ccggaagaaa aaaggccccg
     1261 cattgctgcg gggccttctg tttttgtgag gactggaccc cgaccttcgc cgggcaacaa
     1321 gtcagtcgtt gtcatccccc gtcaaaaacg ccggggcaaa cttgggctcg ccatcgccat
     1381 tctcgccttc cccccgggaa ggctgcgagt gacgatcgtc tccgccgcga tcttcgcggt
     1441 cgcgcctggg accacggtcg cctcggccct caccacgagg cccgcgatca cggtcgccgc
     1501 cgcgtccgcc acggtctccg ccgccgcctt cgcgcctcgg accgcgtcca cggccgcgat
     1561 ctccgcggtc gcctctcggg ccgcggtcac cgccttcgcg cggctccctc ggaggccgcg
     1621 tgtcgggcag ctcttcgccg gtctcctggt cgacgaggcg catggagaga cgcaccttgc
     1681 cgcgctggtc gacctcgagg agcttgacct tcacttcctg gccttcctcg aggacgtcgc
     1741 ggacgttctc gacccgctcg ttcttgatct cggacacgtg caccaggccg tccttgcccg
     1801 gcatgaaggt cacgaacgcg ccgaaatcga cgatgctggc gaccttgccg gtatagatcg
     1861 tgccgggctc cggctcggcg acgatgccgt ggatccactg gcgcgcggcc tcgatctggc
     1921 tgaggtcgga cgagctgatc ttgatcacgc cctcgtcgtc gatgtcgacc ttggcgccgg
     1981 tctcggcgac gatttcgcgg atgaccttgc cgccggtgcc gatgacttcg cggatcttgt
     2041 ccttggggat ctgcatcgtc tcgatccgcg gcgcatgctc ggagagctcg gtgcggacgt
     2101 cggggagcgc cttggccatt tcgccgagga tgtgcgcacg gccgtccttc gcctgggcga
     2161 gggcggtctt catgatctcc tcggtgattc cggcgacctt gaagtccatg tcgccgagat
     2221 gatcctcgtc gccgaggatg tccgacagga tggcgaactt gtcgccttcc ttgatcagcc
     2281 ccatc
//
LOCUS       DATAKH010000207         4646 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_29037,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000207 DATAKH010000000
VERSION     DATAKH010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4646
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29037"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VHN55_08660"
     CDS             complement(<1..687)
                     /locus_tag="VHN55_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX2804032.1"
                     /translation="MSDALVILGAAGVVIPAFARFRISPVIGFILVGLAVGPAGLGSL
                     AGDYAWLSYITISNREAVEPFAELGIILLLFSIGLELSFRRLWGMRRLVFGVGAAELL
                     VSAALIAVTLHLMGQAWAGAIGLGLALALSSTSLVIPLTGTRGPVGRSALAMLLFEDV
                     ALVPIVFALGAMAPYASSSGVTPLLTTMLLGAGAAVGLLIGGRLLLPRLFAQAARTKS
                     PELFLAASLLV"
     gene            787..1998
                     /locus_tag="VHN55_08665"
     CDS             787..1998
                     /locus_tag="VHN55_08665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2804033.1"
                     /translation="MTDGLDLIVVGGGPAGMMAGLLFARSGCRVEVLEKHADFFRDFR
                     GDTVHPSTMEILDQLGMLERFLKRPHNKVSRAELRIAGREWTIGDLSHLDTAAPFIAM
                     MPQWDFLDFLRDEASAFPGFSLRMDSPVEEFVEEEGRVVGVRIKGGSQLRSNLTIAAD
                     GRSSIVRKMLPVEDLGAPMDVFWFRVAKAPVEQGALRGNVERGRLLVMIDRGDYWQCA
                     FLIPKGAAAAYQERGIDTIREEVAAAAPPDLDLRELDEITDLHLLSVKLDRLTCWHRA
                     GLLAIGDAAHAMSPIGGIGINLAIQDAVAAANALARPLARGENVDRRLHEVQDRRLFP
                     TRVIQAAQKLAQDNIIGRLLRPGEPLRKAPLPIRLLDRFPILRRIPGRFVGLGVRRER
                     VSSPAQPPPGP"
     gene            complement(1977..3587)
                     /locus_tag="VHN55_08670"
     CDS             complement(1977..3587)
                     /locus_tag="VHN55_08670"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007684574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX2804034.1"
                     /translation="MVSQKTKARLEIRQAEVSDADAISDLVHRSYTDLPGYTPAEIRA
                     QINNFGEGCFVAILDDKVVGYCASLRIDEEIALHPHSWREITGAGVGSRHDPLGDWLY
                     GYEMCVDPKVRGTRLGRRLYEERRSLAERLGLSGIAFAGRMPNLSKHRRKVAGPSDYL
                     EQVEQGKIHDPVLRFQLANGFTPVGILEEYLPSDAKSLGHAVLMIWRNPYVESDKPKS
                     FRLPRGVESVRVATCQLQARAVKNFKEFIGYIDYFTDIAADYRSDFILFPELFTLQLL
                     SFEDKVLSPMEAIEKLSTYTPEIRKALSAMALKYNINIIGGSHPTRADDGDIQNVAFI
                     CLRDGSIHEQEKMHPTPNERYWWNIKGGDSIDAIQTDCGPIGVLICYDSEFPELARRL
                     ADQGARILFVPFCTDNRQGYMRVRYCSHARAIENQCFVVLSGNVGNLPKVHNMDIQYA
                     QSCILTPCDFPFARDGIAAEASENVETMTISDVNLADLNWARAEGTVQTLADRRFDLY
                     DIKWAKPKGQTAPQPAPPTSAPHGPGGG"
     gene            complement(3601..>4646)
                     /locus_tag="VHN55_08675"
     CDS             complement(3601..>4646)
                     /locus_tag="VHN55_08675"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEX2804035.1"
                     /translation="AAEAIKKHGVGVKCATITPDEARVEEFGLKKMWRSPNGTIRNIL
                     GGVVFREPIVMSNVPRLIPGWTDPIVVGRHAFGDQYKATDFKVPGPGKLTMKWAGENG
                     DELEFEVFDFPAAGVAMGMYNLDESIRDFAHACFNYGLNRGWPVYLSTKNTILKAYDG
                     RFKDIFQEIYDSDYKAKFEKAGIEYQHRLIDDMVASALKWSGKFIWACKNYDGDVQSD
                     QVAQGFGSLGLMTSVLMSPDGKTVEAEAAHGTVTRHYRMHQQGKATSTNPIASIFAWA
                     EGLKYRGQFDETPDVVRFAETLERVCVETVESGQMTKDLAILVGPEQPWMTTEQFFEA
                     IRVNLEKAMAAWA"
BASE COUNT          835 a         1444 c         1489 g          878 t
ORIGIN      
        1 gacaagcagc gaggcggcaa gaaacagttc ggggctcttg gttcgtgccg cctgcgcgaa
       61 caggcgcgga agaaggagcc gcccgccaat caacagcccg actgctgcgc cggcgccaag
      121 gagcatggtc gtgagcagcg gagtcacgcc cgagctcgac gcataaggcg ccatcgcccc
      181 gagcgcgaac acgatcggga caagcgcaac gtcctcgaag aggagcatcg caagcgccga
      241 gcggccgacg gggccgcgcg tgccggtgag cgggatgaca agcgaagtcg atgagagggc
      301 gagagcaagg ccgagaccga tcgcgcccgc ccacgcttga cccatcaggt gcagagtcac
      361 cgcaatcagc gcagcggaga cgagcagctc tgccgcgccg acgccgaata ccaaccgccg
      421 catcccccac aggcgccgga acgaaagctc cagcccgatt gaaaacagca ggaggatgat
      481 cccgagctcg gcgaagggtt cgaccgcttc acggttcgaa atcgtgatgt agctaagcca
      541 ggcataatcg ccggccagcg atccgagccc cgccggtccg accgccaggc cgacaaggat
      601 gaagccgatc acggggctga tccggaaacg cgcgaacgcg gggatgacca caccggcggc
      661 gccgaggatc acgagtgcgt cgctcattcc cgacgtgctg aattctccgg cgccgtgcat
      721 ggtgcccgtt taagcagcag cgttaccgct tgtcactgca agcgggccac gcttagctcc
      781 gcgtcaatga ctgatggact cgatctgatc gtcgtcggtg gcggccctgc cgggatgatg
      841 gcgggtcttc tgttcgcgcg ctcgggttgc cgggtggaag tgctggaaaa gcacgcggac
      901 ttcttccgcg atttccgcgg cgacacggtt catccttcga cgatggagat cctcgaccag
      961 ctcggcatgc tcgagcggtt cctgaagcgg cctcacaaca aggtctcgcg cgccgagctt
     1021 cggatcgccg ggcgggaatg gacgatcggc gacctttcgc atctcgacac tgcggcgccg
     1081 tttatcgcga tgatgccgca atgggatttc ctcgatttcc tacgcgacga agcaagcgcg
     1141 tttccgggct tttccctgcg gatggactcg cctgtcgaag aattcgtcga ggaagagggc
     1201 agggtcgttg gagtaagaat caagggcggt agccagcttc gctcaaacct caccattgcc
     1261 gccgatggcc ggtcctcaat cgtgcggaag atgctgccgg tggaagacct tggtgcgccg
     1321 atggacgttt tctggttccg ggtagcgaag gccccggtgg agcagggggc gcttcgtggc
     1381 aacgtcgagc gcggacggtt gctggtcatg atcgaccgcg gcgattattg gcagtgcgcc
     1441 ttcctgatcc ccaagggcgc ggcggccgcg tatcaagagc gcgggatcga taccattcgc
     1501 gaagaggtcg ccgctgcggc cccacccgac ctcgaccttc gcgaactcga cgaaatcacc
     1561 gaccttcacc tgctgtcggt caagctcgac cggctgacct gctggcatcg cgccggcctg
     1621 cttgcaatcg gcgatgcggc gcatgcgatg tcgccgatcg gcgggatcgg aatcaacctt
     1681 gctatccagg atgccgtcgc ggcggcgaac gcgctcgcgc gtcctcttgc gcgcggcgag
     1741 aacgtcgacc ggcgactcca cgaggtgcag gatcgtcgcc tgtttccgac gcgggtcatt
     1801 caggcagcgc agaagttggc gcaggacaat atcatcggcc gtttgctcag gcccggcgag
     1861 ccattgcgaa aggcaccgct gcccatccgg ctgctcgacc gtttcccgat cctgcgacga
     1921 atccccggca ggttcgtcgg actgggagtg cggcgcgagc gcgtatctag cccggctcag
     1981 ccgccccccg gcccgtgagg cgctgaggtc ggcggggccg gctgcggcgc cgtctggccc
     2041 ttgggcttgg cccatttgat gtcgtagagg tcgaaacgcc ggtcggcgag cgtctggacg
     2101 gtgccctcgg cccgcgccca gttgaggtcg gcaaggttga cgtcgctgat cgtcatcgtc
     2161 tcgacattct cgctcgcctc ggccgcgatc ccgtccctag cgaaggggaa gtcgcacggc
     2221 gtcaggatgc agctttgcgc gtactggatg tccatgttgt ggaccttggg cagattgccg
     2281 acattgcccg agaggacgac gaagcactgg ttctctatcg cccgcgcgtg gctgcaatag
     2341 cgcacgcgca tatatccctg gcggttgtcc gtgcagaagg gaacgaagag gatccgggcg
     2401 ccctggtcag ccagtcgccg ggcaagctcg ggaaactcgc tgtcgtagca gatgagcacg
     2461 ccgatcggcc cgcaatcggt ctggattgca tcgatgctgt cgccgccctt gatgttccac
     2521 cagtaacgct cgttgggggt ggggtgcatc ttctcctgct cgtggatcga tccgtcgcga
     2581 agacagatga aggccacgtt ctggatgtcg ccgtcgtcgg cacgggtcgg atgcgacccg
     2641 ccgattatgt ttatgttgta tttgagagcc atcgcactga gcgccttacg gatctccggc
     2701 gtataggtgg acagcttttc gatcgcctcc atcggcgaca ggaccttgtc ctcgaaggac
     2761 agcagctgga gcgtgaagag ttccgggaaa agaatgaagt cggaacgata atctgcagcg
     2821 atatccgtga aatagtcgat gtagccgata aattctttga agtttttgac ggccctcgcc
     2881 tgcaactggc atgtcgccac ccggacgctt tcgacgccgc gcggaaggcg gaaggacttg
     2941 ggcttgtcgc tttccacata gggattgcgc cagatcatca gcacggcgtg gcccaacgac
     3001 ttcgcatcgg acggtaggta ttcctcgagg atgccgaccg gagtgaatcc attggcaagc
     3061 tggaagcgaa gcacggggtc gtggatcttc ccttgttcga cctgttccag atagtcgctg
     3121 gggccggcta ccttgcgccg gtgcttggaa aggttgggca tccgcccggc aaaggcgatc
     3181 ccgctcagcc cgagccgctc ggcgagcgac cgccgctcct catagaggcg tcgcccgagg
     3241 cgcgtgccgc ggaccttggg gtcgacgcac atttcatatc cgtaaagcca gtcaccgagc
     3301 gggtcgtggc gcgagccgac gccggcgccg gtaatttccc gccagctatg cgggtggagc
     3361 gcgatttctt cgtcgattcg taatgacgcg caatagccga ccactttgtc gtcgaggatg
     3421 gcaacgaagc agccctcgcc aaaattgttg atctgcgcgc gaatttcggc cggcgtatag
     3481 ccggggaggt cggtgtagct gcgatggacg aggtccgaga tcgcgtccgc gtcgctgacc
     3541 tccgcttgcc gaatttccag ccgtgccttg gttttctgac taaccatgtt cctcccgggc
     3601 tcaggcccag gcggccatcg ccttctccag gttgacgcgg atcgcctcga agaattgctc
     3661 ggtcgtcatc cacggctgct cggggccgac aaggatcgcc agatccttcg tcatctgccc
     3721 gctttccacc gtctcgacgc acacgcgctc gagtgtttcc gcaaaccgca ccacgtccgg
     3781 cgtctcgtcg aactggccgc ggtacttgag cccttcggcc caggcgaaga tcgacgcgat
     3841 agggttggtc gacgtcgctt tgccctgctg gtgcatacga taatggcgcg tgacggttcc
     3901 gtgggcggct tcagcttcca cggtcttgcc gtcgggcgac atcagcaccg acgtcatcag
     3961 gccgagcgaa ccgaagccct gcgccacctg gtccgactgg acgtcaccat cgtaattctt
     4021 gcacgcccag atgaacttgc cgctccactt gagtgcggag gcaaccatgt cgtcgatcag
     4081 acgatgctgg tattcgatgc cagctttctc gaacttcgct ttgtaatcgc tgtcgtaaat
     4141 ttcctggaag atgtccttga accgcccgtc ataggccttg aggatcgtgt tcttggtcga
     4201 caggtaaacc ggccatccgc ggttgaggcc gtagttgaag caggcatggg caaagtcgcg
     4261 gatcgactcg tcgaggttgt acatgcccat cgcgacaccg gcggcgggga agtcgaacac
     4321 ctcgaactcg agctcgtcgc cattctcccc ggcccatttc atcgtcagct tgccgggccc
     4381 ggggaccttg aagtcggtcg ccttgtattg gtcgccgaaa gcgtgacggc cgacgacaat
     4441 cggatcggtc cagccgggga tcagcctcgg cacgttcgac atgacgatcg gctcgcggaa
     4501 gacgacccct ccgagaatgt tgcggatggt gccgttgggc gagcgccaca tcttcttaag
     4561 gccgaactct tcgacccgcg cttcatccgg ggtgatcgta gcgcatttca cgccaacgcc
     4621 gtgcttcttg atcgcctcgg ccgcct
//
LOCUS       DATAKH010000208         5543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_13494,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000208 DATAKH010000000
VERSION     DATAKH010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5543
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13494"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VHN55_08680"
     CDS             <1..213
                     /locus_tag="VHN55_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804036.1"
                     /translation="STANRLASKDPDELIDDTRNFIRKSPGVALAGAAIVGFALARLV
                     KSGLASDDNDEDGDEDRRSSSSRRRS"
     gene            213..560
                     /locus_tag="VHN55_08685"
     CDS             213..560
                     /locus_tag="VHN55_08685"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEX2804037.1"
                     /translation="MLKPAEDPARPGGDRSFGELASQLVDDAKSYARAEVDLAKAIAA
                     EKSKSVAVAAVLFGAATLVAIGAVCALSVAIVVSLAYYMTPLLAGLVTFLIVGAFAGA
                     IGWVGWVKLRDAL"
     gene            557..925
                     /locus_tag="VHN55_08690"
     CDS             557..925
                     /locus_tag="VHN55_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804038.1"
                     /translation="MTEESLRIVNARRRAEQARARLAATFDDILAYGRQLQDKLAPSH
                     IARDAWDAAKSKGADIAEDAVDAVRKRPVAASGAVAALALFIAREPLIDLAGKMMNGK
                     PKKKVKKPAKAKEPVEKIDE"
     gene            918..1337
                     /locus_tag="VHN55_08695"
     CDS             918..1337
                     /locus_tag="VHN55_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804039.1"
                     /translation="MSESDRNRASNAGESDSSLRQRAIDAYDSVLDSASDAGRRTGDT
                     IGEAPLVALGAGVAVGALLAALIPTSRRERDLLRPYGDRVTGAARDAAEAARRTGSDK
                     LRELGLTPEVLADKASEAAKASAQAAVGKFRDEAGKR"
     gene            1377..1616
                     /locus_tag="VHN55_08700"
     CDS             1377..1616
                     /locus_tag="VHN55_08700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4170 domain-containing protein"
                     /protein_id="HEX2804040.1"
                     /translation="MSKLHLVFGGRVEDPRGVDFDLETIDLVGLYNNYADAEEAWRGK
                     AQRTVDDAEMKYVIVHLHRLLEPDSDGISRPKAKA"
     gene            complement(1613..2239)
                     /locus_tag="VHN55_08705"
     CDS             complement(1613..2239)
                     /locus_tag="VHN55_08705"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEX2804041.1"
                     /translation="MATPRTATAWIAIVTALFWLAASIAGFSDTAALALGFIPDRWSG
                     AVLLGTAVPAFLTPLTATLVHAGLLHLGLNLLIFVWCGTLVERVIGPKALMLIYGVSA
                     YVAAIAQWAVDPHSQVPMVGASGAISGVIGAFALSFGQQKQLVRSRSLNRTLNALWLL
                     AAWVVLQLMTGILAGFHGVLVATPAHVGGFVSGLLLQRPLLMWRYRNA"
     gene            complement(2256..2735)
                     /gene="greA"
                     /locus_tag="VHN55_08710"
     CDS             complement(2256..2735)
                     /gene="greA"
                     /locus_tag="VHN55_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEX2804042.1"
                     /translation="MATAEKVPMLAEGHRKLSEQVRHLKNVERPAVVEAIEAARAHGD
                     LSENAEYHAAKERQGQIEATIADIDDQLARAIVIDPSTLSGNKVVFGATVTLIDEDKK
                     KVKYQLVGQSEADAKDGKISFNSPLGRALIGREVGDEVEVSTPSGDRYYEIKKVEFV"
     gene            complement(2824..>5543)
                     /gene="carB"
                     /locus_tag="VHN55_08715"
     CDS             complement(2824..>5543)
                     /gene="carB"
                     /locus_tag="VHN55_08715"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEX2804043.1"
                     /translation="PISEILIEKSIAGWKEFELEVMRDTSDNCVIICSIENVDPMGVH
                     TGDSITVAPALTLTDKEYQIMRSASIAVLREIGVETGGSNVQFAVDPKTGRMVVIEMN
                     PRVSRSSALASKATGFPIAKVAAKLAVGYSLDEISNDITGGATPASFEPTIDYVVTKI
                     PRFAFEKFKGADAVLSTSMKSVGEVMAIGRSFPESLQKALRGLETGLTGLDRVRELEN
                     ADEGRIESALARPTPDRLLVAAEALRQGFTVERINAIAGFDPWFLRQLAAIVLAEMEV
                     RTSGLPADAAGMRRLKALGFSDARLAQLSIRSTGAAADPGASGLVHDVLKHMTGGVTE
                     AEVLDHRLRLGVRPVFKRIDSCAAEFDATTPYLYSTYEAPLFGEPVDEAEVSDRKKVV
                     ILGGGPNRIGQGIEFDYCCCHAAFALRDAGFETIMVNCNPETVSTDPETSDRLYFEPL
                     TAEDVLEIVRREAEKGELLGVIVQLGGQTPLKLAQDLQKAGVPILGTSPDSIDLAEDR
                     ERFAKLVGKLGLKQPANGIARSRDEALTVAERIGYPVLLRPSYVLGGRGMEVVDGPEQ
                     LDHYIATAVAVSGSSPVLIDRYLRDAVEVDVDAIADGSDVVVAGVMQHIEEAGVHSGD
                     SACAIPPHSLSAQVVAEIERQTTALAVALKVRGLMNVQFAVKDEQVYLIEVNPRASRT
                     VPFVAKAIGRPVAKIAARVMAGEPLGSFDPIDRHLSHIAIKEPVFPFARFPGCDPVLG
                     PEMRSTGEVMGLDTDFDAAFSKALLGAGIHLPQSGTVFVSVKDGDKPHIVPAVEAMLE
                     LGFKVVATGGTAEYLASRGLAVETVNKVAQGRPHIVDRITDGDVQLVFNTTEGWQSLK
                     DSHSIRATALQRKVPYFTTAAASLAVARSLGALRGRALEVRSLQSYYSD"
BASE COUNT          991 a         1911 c         1716 g          925 t
ORIGIN      
        1 agcaccgcga acaggcttgc ctcgaaggac cccgacgagc tgatcgacga cacacgcaac
       61 ttcatccgca agagccccgg cgtggcgctg gcaggcgcgg cgattgtcgg cttcgctctt
      121 gcccggctgg tgaaatccgg cctcgcaagc gacgacaacg acgaagacgg tgacgaggat
      181 cgtcggtcga gctcatcgcg cagacggagc tgatgctgaa gccggcggaa gacccagcgc
      241 gcccgggcgg tgaccgttcg ttcggcgagc ttgcaagcca gctcgtcgac gacgccaagt
      301 cctatgcccg ggccgaagtg gacctcgcca aggcgatcgc cgcggaaaag tcgaagtccg
      361 tggctgtcgc ggcggtcctg ttcggggctg cgacactcgt tgcaatcggt gcggtttgcg
      421 cccttagcgt cgcgattgtc gtctccttgg cctattacat gacccccctg cttgcgggcc
      481 tggtcacatt cctgatcgtt ggagcgttcg ccggcgctat cggatgggtc ggctgggtga
      541 agctgaggga tgcgctgtga ccgaggaatc gctgagaatt gtcaacgctc gccgacgcgc
      601 cgagcaggcc cgcgccaggc tcgccgcgac cttcgacgat atcctcgctt acggccggca
      661 gctccaggac aagctggcgc cgagccatat cgcccgagac gcctgggacg cggcaaagtc
      721 gaagggcgcc gacatcgccg aagatgcggt cgacgcggtg cgcaaacgtc ccgtcgctgc
      781 gagcggggca gttgccgccc ttgccttgtt catcgcccgc gagccgctga ttgatctcgc
      841 cggcaagatg atgaacggca aaccgaagaa gaaagtcaaa aagcctgcaa aggccaagga
      901 accagtggag aagatcgatg agtgagagtg atcgcaatcg ggcaagcaac gcaggcgagt
      961 cggactccag cctcaggcag cgcgcaatcg acgcttacga cagtgtcctc gacagcgctt
     1021 ctgacgcagg acgtcgcacc ggcgacacga tcggcgaagc gccacttgtc gctctcggcg
     1081 cgggcgtggc cgtcggcgcg cttttggcgg ctctgatccc gaccagccgc cgcgagcgcg
     1141 acctccttcg cccttacgga gatagggtca ccggcgccgc ccgcgacgcc gccgaggcgg
     1201 cccgccgcac cggctccgac aagcttcgcg agctcggcct cacgcccgaa gtcctggccg
     1261 acaaggcgag cgaggcggca aaggcgtcag cccaggctgc tgttggcaag tttcgcgacg
     1321 aagccggcaa gcgctgagcg gttgcaagcg ccggatttct tgctagcccc cgccccatga
     1381 gcaaactcca cctcgtgttc ggcggccggg tcgaggatcc gcgcggagtc gacttcgatc
     1441 tggaaacgat cgacctcgtc ggtctctaca acaattacgc cgacgccgaa gaggcgtggc
     1501 gaggcaaggc gcagcgcacg gtcgatgatg ccgaaatgaa atatgtgatc gtccacctcc
     1561 accggctgct cgagccggac tcggacggga tttcgaggcc gaaggcgaaa gcctaagcgt
     1621 tcctgtagcg ccacatcagc agcggccgct ggagcagcag tcccgagacg aacccgccga
     1681 catgcgcggg cgtcgccacc agcactccgt gaaagccagc tagaatcccc gtcatcagct
     1741 ggagcacgac ccaggccgca agaagccaca gcgcgttgag agtccggttc agcgaccggg
     1801 atcgaacgag ctgcttctgc tggccgaagc tgagagcgaa agctccgatg actccgctga
     1861 tcgccccgct ggcgccgacc atcggcactt gtgaatgcgg atcgacggcc cattgcgcga
     1921 tcgccgcgac ataggccgac acgccataga tcagcatgag tgccttgggc ccgatcaccc
     1981 gctcgaccag agttccgcac cagacgaaaa tcagcaggtt cagtcccagg tgaagcagtc
     2041 ccgcgtggac cagcgtcgcc gtcagcggag tgagaaacgc cggaaccgcg gtgccgagca
     2101 atacggcccc gctccagcgg tccggaatga accccagcgc gagcgctgcg gtgtcgctga
     2161 atccggcaat agaggcggcc agccagaaca gcgcggtgac gatcgcaatc cacgcggtcg
     2221 cggtgcgcgg agtcgccatt accggctccg ggccctcaaa cgaactcgac tttcttgatc
     2281 tcgtaataac ggtcgccgga tggcgtcgac acctcgacct cgtcgccgac ctcgcggccg
     2341 atcagcgccc gcccgagcgg cgagttgaag ctgattttac cgtccttggc gtccgcttcg
     2401 gactggccga caagctggta cttcaccttc ttcttgtctt cgtcgatcaa ggtcacggtc
     2461 gctccgaaca cgaccttgtt gcccgacagc gtcgacggat cgatgacgat cgcccgggcg
     2521 agctggtcgt cgatatccgc gatcgtcgcc tcgatctggc cctgccgctc cttggcggca
     2581 tgatattcgg cgttttcgga caaatcgccg tgggcgcgcg cggcttcgat cgcctcaacc
     2641 accgccggcc gctcgacgtt cttgaggtgc cgcacctgct ctgacagctt gcgatgccct
     2701 tctgcaagca tcggcacttt ttcggcggtc gccatgtcgt cggccctttc ttcaaaaccg
     2761 ccccgccggc gccgtcacgg caccgctgca tggggcggat tgtcggatga aaatcagttc
     2821 acttcagtcg gaataatagg attgcagcga gcgcacttca agcgcccgcc cgcgaagcgc
     2881 cccaagcgag cgagcgaccg caaggctcgc cgcagcggtg gtgaaatagg gcaccttgcg
     2941 ctggagcgcg gtcgcccgga tcgagtggct gtccttcagc gactgccacc cttcggtggt
     3001 gttgaagacc aattgaacgt cgccgtcggt gatcctgtcg acgatatgcg gacgcccctg
     3061 ggcgaccttg ttcaccgtct cgaccgcaag ccccctggac gccagatatt cggccgtgcc
     3121 ccccgtcgct accaccttga acccaagctc gagcatcgcc tcgaccgccg ggacgatgtg
     3181 gggcttgtcg ccgtccttga ccgacacgaa taccgttccc gactgcggca ggtggatacc
     3241 cgcccccaga agcgccttgc tgaacgccgc gtcgaagtcg gtgtcgagcc ccatcacctc
     3301 gcccgtgctt cgcatttcgg gtccaagtac cgggtcgcat ccggggaagc gggcgaacgg
     3361 gaacaccggt tccttgattg cgatatgcga caagtggcgg tcgatgggat cgaaactgcc
     3421 caagggttcg cccgccatca cccgggccgc gatcttcgcc accggccgac cgatcgcctt
     3481 ggcgacgaat ggcaccgtcc ggctagcccg cggattgacc tcgatgaggt agacctgctc
     3541 gtccttcacc gcgaactgga cgttcatcag cccgcggacc ttaagcgcca ccgctaaagc
     3601 cgtcgtctgc cgctcgattt ccgcaacgac ttgggcgctc aggctgtggg gcgggatcgc
     3661 gcaggcgctg tcgcccgaat gcacccccgc ctcctcgata tgctgcatca cccccgcgac
     3721 gacgacatca ctgccgtcgg cgatcgcatc gacgtccact tccaccgcgt cgcgaagata
     3781 gcggtcgatc agcaccggcg agcttccgga aaccgcgacc gcggtcgcga tataatggtc
     3841 gagctgctcg ggcccgtcga ccacctccat cccccgcccg ccgagcacgt aggacggccg
     3901 caggagcacc ggataaccga tccgctccgc caccgtcagc gcctcgtcac ggctgcgcgc
     3961 gatcccgttc gccggctgct tgaggccgag cttgccgacc agcttcgcaa agcgctcccg
     4021 gtcctcggca aggtcgatgc tgtcggggct ggtgccaagg atcggcaccc cggctttctg
     4081 caggtcctgg gcaagcttga gcggggtctg cccgccgagc tggacgatca cgcccagcaa
     4141 ttcccctttc tccgcttccc gcctgacgat ttcgaggacg tcctcggccg tcagcggctc
     4201 gaaataaagg cggtccgacg tctcggggtc ggtggaaacc gtctccgggt tgcaattgac
     4261 catgatcgtc tcgaacccgg cgtcgcgaag cgcgaaggcg gcgtggcagc agcaatagtc
     4321 gaactcgata ccctgcccga tccggttcgg cccgccgccg aggatgacga ccttcttccg
     4381 gtccgaaacc tccgcctcgt cgacgggctc gccgaacaaa ggcgcctcat aggtcgaata
     4441 gagatagggc gtggtcgcat cgaactcggc ggcgcagctg tcgatccgct tgaacaccgg
     4501 ccggacgccc agccgaagcc ggtggtccag cacttccgct tcggtgaccc ccccggtcat
     4561 gtgcttgagc acgtcgtgca ccagccccga tgcgcccgga tcggccgccg caccggtcga
     4621 gcggatcgag agttgcgcca gccgggcatc ggaaaaaccg agcgccttca accgccgcat
     4681 tcccgccgcg tccgccggaa gcccgctggt gcgaacctcc atctccgcca gaacgatggc
     4741 cgccaactgc ctcaaaaacc acgggtcgaa gccggcgatg gcgttgatcc gctccaccgt
     4801 gaaaccctgc cggagcgctt ccgctgctac cagcagccgg tccggggtcg gccgcgccaa
     4861 agcgctctcg atccgcccct cgtcggcatt ttccagctca cggacccggt cgagcccggt
     4921 cagcccagtc tccagcccgc gaagcgcttt ctgcaggctc tccgggaacg agcgcccgat
     4981 cgccatcact tcgccgaccg acttcatcga cgtcgagaga accgcgtccg cgcccttgaa
     5041 cttctcgaac gcgaagcgcg ggatcttggt caccacataa tcgatcgtcg gctcgaagct
     5101 cgcgggcgtc gcaccgccag tgatgtcgtt ggaaatctcg tcgagcgagt agccgaccgc
     5161 cagcttcgct gcgaccttgg caatcgggaa gcccgtcgcc ttcgacgcta gggccgagct
     5221 ccgcgacacg cgcgggttca tttcgatcac caccatccgc ccggtcttcg gatcgaccgc
     5281 gaactggacg ttcgaaccgc cggtctccac gccgatctcg cgcagcaccg cgatgctcgc
     5341 gctgcgcatg atctggtatt ccttgtcggt cagcgtcagc gccggggcga cagtgatcga
     5401 atcgccggtg tggacgccca tcgggtcgac gttctcgatc gagcagatga tcacgcagtt
     5461 gtcggacgtg tcccgcatga cctcgagctc gaactccttc cagcccgcga tcgacttctc
     5521 gatgaggatc tcggagatgg ggc
//
LOCUS       DATAKH010000209         5312 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_29226,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000209 DATAKH010000000
VERSION     DATAKH010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 5312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5312
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29226"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VHN55_08720"
     CDS             complement(<1..327)
                     /locus_tag="VHN55_08720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEX2804044.1"
                     /translation="MKRRVAILGATGSIGQSTLDLIERDPARFEVVALTARNNVDTLA
                     DAARRTGAKLAVIADPDRFHDLRDRLGGSGCRAAAGPEGIIEAATSDVDLVMAAIVGC
                     AGLVPTM"
     gene            complement(324..956)
                     /locus_tag="VHN55_08725"
     CDS             complement(324..956)
                     /locus_tag="VHN55_08725"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEX2804045.1"
                     /translation="MSELLLRTGTGVLMMVVALVATVMGGYAFAVLSAAVATAVFYEW
                     TRIAKGWGADWYVGGFLYALAAAVSLLWIRDRAEDGVSLILWVFIVVWSTDIGAYFTG
                     RAIGGPKLAPAISPGKTWAGFYGGVAVATLLGGAWALFVGLHAVLLLLAPLFAVAAQG
                     GDLFESWMKRQAGIKDSGRWLPGHGGVFDRVDGLLPVAILTALAVVAGAA"
     gene            complement(953..1690)
                     /gene="uppS"
                     /locus_tag="VHN55_08730"
     CDS             complement(953..1690)
                     /gene="uppS"
                     /locus_tag="VHN55_08730"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HEX2804046.1"
                     /translation="MTVSTAAAADGAAAVVPRHVAIIMDGNGRWAKQRGLPRVAGHKA
                     GAEAVRRTLQAAADAGVEVLTLYAFSSENWRRSDDEIADLTGLMRYYVEKELQRLIDE
                     RVKLKLIGNYRAFGTDTARLLENAVEKTAANDRLTLVVALNYGSRAEIAKAASALASK
                     AVAGGVAPEAIGPEDLASELSTAGLPDPDLLIRTSGEIRLSNFLLWQAAYSELLFTQI
                     LWPDFDETAFNDALEQFSIRQRRFGGR"
     gene            complement(1687..2247)
                     /gene="frr"
                     /locus_tag="VHN55_08735"
     CDS             complement(1687..2247)
                     /gene="frr"
                     /locus_tag="VHN55_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEX2804047.1"
                     /translation="MTTSIDKSDLQRRMHGAVEALKHDLSGLRTGRASTALLDTIHVE
                     VYGANMPLNQVATVSVPEPRLLTVQVWDRSNVQPVEKAIRSANLGLNPVTDGQLIRLP
                     IPDLTEERRKELAKLVGQYAEKAKIAVRNVRRDGMDHLKNDEKKHDISEDERKRLEQE
                     VQKLTDGTIEEIDQLAESKEKEILGK"
     gene            complement(2251..2973)
                     /gene="pyrH"
                     /locus_tag="VHN55_08740"
     CDS             complement(2251..2973)
                     /gene="pyrH"
                     /locus_tag="VHN55_08740"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEX2804048.1"
                     /translation="MTRPRFNRILLKLSGEALMGEGQFGIDPEVVNGLAAEIAAAKAQ
                     GHELCLVVGGGNIFRGMAAAAEGFDRTSADYMGMLATVMNALALQNALENQGTDTRVL
                     SAIPMAAVCEPYIRRRAMRHMEKGRIVLFAAGTGNPYFTTDTAAALRAAEMGCDALFK
                     GTSVDGVYDADPKKVTGAKRYDRLSFHKVLSDDLKVMDAAAVALCRDNNIPIVVFNIR
                     QPGNLAEVLSGRGTATIVQNEE"
     gene            complement(3065..4009)
                     /gene="tsf"
                     /locus_tag="VHN55_08745"
     CDS             complement(3065..4009)
                     /gene="tsf"
                     /locus_tag="VHN55_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEX2804049.1"
                     /translation="MAEITAASVKELRERTGAGMMDCKKALAENNGDMEASVDWLRAK
                     GLSAAAKKAGRTAAEGLVGVAVEGNRGAIVEVNSETDFVAKNEKFQDFVGNVAKLALE
                     TGGNVENLLAATYPGGGTVEEALTNNIATIGENQSLRRSTVLAVNEGAIVSYVHNAVA
                     PGLGKIGVLVALESGAGADSLQSIGKQIAMHIAAANPLALTGDDLDADLIERERGIAL
                     EKAKESGKPQNIAEKMVEGSIAKFRKENALLSQLFVMDNKTPVSDVLASAGKEAGSDI
                     QLSAFVRFQLGEGIEKKQDDFAAEVAAAAGTSKAEPVA"
     gene            complement(4057..4812)
                     /gene="rpsB"
                     /locus_tag="VHN55_08750"
     CDS             complement(4057..4812)
                     /gene="rpsB"
                     /locus_tag="VHN55_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEX2804050.1"
                     /translation="MAATVVTMQQLLEAGVHFGHQTHRWNPRMKPYIFGDRNGVHIID
                     LSQTVPLFARALEFVQQTTARGGKVLFVGTKRQAQDAIAESAQASGQHFVNHRWLGGM
                     LTNWKTISNSIKRFKTLEEQLSGDTTGLTKKEVLQLTRERDKLEKSLGGIRDMGGLPD
                     VMFVIDTNKEELAVKEANTLGIPVVAILDSNSDPTGIAFPVPGNDDASRAIRLYCDSI
                     ASAATAGRAGEAQSKGVDIGEMAEPPAEAALEA"
     gene            complement(5142..>5312)
                     /locus_tag="VHN55_08755"
     CDS             complement(5142..>5312)
                     /locus_tag="VHN55_08755"
                     /inference="COORDINATES: protein motif:HMM:NF019621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol O-phosphatidyltransferase"
                     /protein_id="HEX2804051.1"
                     /translation="GLLGAALVTNPWITLLAIALIYLAVLPFSIASYAAVKRRRAGEA
                     ASPRRAPKARQQ"
BASE COUNT          905 a         1718 c         1664 g         1025 t
ORIGIN      
        1 catcgtcgga accagccccg cgcaaccgac gatggcggcc atcaccaggt cgacgtccga
       61 agtcgcggcc tctatgatcc cctcgggccc ggcggcggcc cggcatccgc ttcccccgag
      121 ccggtcgcgc aagtcatgga aacggtcagg gtcggcaatc accgccagtt tcgcgccggt
      181 tcggcgggcc gcgtcggcaa gcgtatcgac gttgttccgg gcagtgagcg cgacgacctc
      241 gaaacgcgct gggtctctct cgataaggtc gagtgtcgac tggccgatcg agccggttgc
      301 tccgaggatc gcgacccgcc gtttcatgcc gcgcctgcga cgactgccag agcggtcaag
      361 atcgcgacgg gaagcagccc gtcgacccgg tcgaaaacac cgccatggcc aggaagccag
      421 cggcccgaat cctttatgcc cgcttgtcgc ttcatccagc tttcaaacag gtcgccgccc
      481 tgggccgcga ccgcaaacag cggtgcaaga agtagcagca ccgcgtgcag cccgacgaag
      541 agcgcccatg ctccgccgag gagcgtggcc actgcgacac cgccgtagaa gccggcccat
      601 gtcttgccgg gactgatcgc cggtgcgagt ttcggtccac cgatcgcacg gccggtgaaa
      661 taagcgccga tgtcggtgga ccatacgacg atgaaaaccc acaggatgag gctgactccg
      721 tcctccgccc tgtcgcggat ccacagcagc gagacggcgg cggcaagcgc gtagaggaag
      781 ccgccgacgt accagtccgc gccccaaccc ttcgcaatcc ttgtccattc gtagaagacc
      841 gccgtcgcaa ccgccgccga aagaacggcg aaggcgtagc cgcccatgac cgtagcgacg
      901 agcgcgacga ccatcatcag cacgccagtg cccgtgcgaa ggaggagctc gctcaacggc
      961 cgccgaaccg gcgctggcga attgagaatt gctcgagcgc atcattgaag gccgtctcat
     1021 cgaagtcggg ccacaggatt tgagtgaaca gcagctccga ataggcggct tgccacagca
     1081 ggaagttgga aaggcgtatt tcgcccgagg tgcggatcag caggtcgggg tcgggaagac
     1141 cggcggtcga cagctctgag gcgaggtctt cgggaccgat agcctccggc gcgacgccgc
     1201 cagcgacggc cttgctggca agcgcggaag cggccttcgc gatttcggca cgggagccat
     1261 agttgagggc aaccacgagg gtcagccggt cgttcgcagc ggtcttctcg acagcatttt
     1321 ccagaagcct ggcggtgtcc gttccgaagg cgcgataatt gccgatcagc ttgagcttca
     1381 cccgctcgtc gatcaggcgc tggagctcct tttcgacata gtagcgcatc aggcccgtga
     1441 ggtcggctat ctcgtcgtcc gatcgccgcc agttttccga ggagaaggcg tagagcgtga
     1501 gcacttccac gcctgcgtcc gcagccgcct gcagggtacg gcgaaccgct tccgcaccgg
     1561 ccttgtgacc ggcaacgcgc ggaaggcccc gctgctttgc ccagcggccg ttgccatcca
     1621 tgataattgc cacgtggcgg ggaacaaccg ccgctgcccc gtccgctgca gcggccgtgg
     1681 agacggtcac ttgccgagga tttccttttc cttcgactcc gccagctgat cgatctcctc
     1741 gatcgtgccg tcggtcagct tctggacttc ctgctcgagc cgtttgcgct cgtcctcgct
     1801 gatgtcgtgc ttcttctcgt cattcttgag atggtccatg ccgtctctgc ggacattgcg
     1861 aacggcgatt ttggccttct cggcatattg gccgacgagc ttggcgagct ccttgcgccg
     1921 ctcttcggtg aggtctggga tcggaagccg gatgagttgt ccgtctgtaa cgggattgag
     1981 tccgagatta gcggagcgaa tcgccttctc gaccggctgg acgttggagc ggtcccacac
     2041 ctgaaccgtc agcagccgcg gctccggcac ggacacggtc gccacctggt tcagcggcat
     2101 gttggcgccg taaacctcga cgtggatcgt atcgagcaat gccgtcgatg cgcggcctgt
     2161 gcggaggccc gaaaggtcgt gcttcaacgc ctcgaccgcg ccatgcatcc ggcgctgaag
     2221 gtccgatttg tcgatgctcg tagtcatgct ctactcctcg ttctgcacga tcgtcgccgt
     2281 gccgcgcccg gaaagcactt cggcgaggtt gccgggctgg cggatattga agacgacaat
     2341 cgggatatta ttgtcgcggc acagggccac ggcggccgcg tccatcacct tgagatcgtc
     2401 gcttagaacc ttgtggaagc tcagcctgtc gtagcgcttg gcgcctgtga ccttcttggg
     2461 atctgcgtca tagacgccgt cgacgctggt gcccttgaac aaggcgtcgc agcccatttc
     2521 ggcagcccgg agcgcagctg cggtgtcggt cgtgaaatag ggattgccgg ttccggcggc
     2581 gaagaggacg atccgccctt tctccatgtg ccgcattgcc cgcctgcgga tgtagggctc
     2641 gcagaccgca gccatcggga tcgccgacag gacacgggtg tctgtgccct ggttctcgag
     2701 cgcattctgg agagcgagcg cgttcatcac cgtcgcaagc atgcccatgt agtcggcgct
     2761 cgttcggtcg aagccctcgg cggctgcggc catgccgcga aagatgttgc cgccgccgac
     2821 aaccaggcag agttcatgcc cttgcgcctt ggcggccgcg atttcggcgg caaggccgtt
     2881 gacgacctcc ggatcgatac cgaactgccc ctcccccatc agcgcctcac ccgaaagctt
     2941 cagcaggatt cggttgaagc gcgggcgggt catcgggcgg aaaatccttg tagatggaag
     3001 aagggcggcc aagcctttat ggcccagccg ccccaattcc aacagctttg cgcagacaag
     3061 gacctcaagc gaccggttcg gccttgctcg ttccggccgc cgcggccacc tcggcggcga
     3121 agtcgtcctg cttcttctcg atgccctcgc caagctggaa gcgaacgaaa gcgctcagct
     3181 gaatgtcgct tccggcttcc ttgccggccg acgcaaggac gtccgagacc ggtgtcttgt
     3241 tgtccatcac gaacagctgc gacaggagcg cattctcctt gcggaacttg gcgatgctgc
     3301 cctcgaccat cttctcggcg atgttctggg gctttccgct ttctttcgcc ttttcaagcg
     3361 cgattccgcg ctcgcgctcg atcaggtccg cgtcgaggtc gtcgccggtc agagcaagcg
     3421 ggttcgcggc cgcgatgtgc atcgcgatct gcttgccgat cgactggagc gagtccgcgc
     3481 ccgcgccgct ctccagggcg accaggacac cgatcttgcc gaggcccggc gcgacagcat
     3541 tgtggacgta ggagacgatc gccccctcgt tgaccgcaag caccgtgctt cggcgaagcg
     3601 actggttctc gccgatggtg gcgatgttgt tggtcagggc ctcctcgacg gtgccgccgc
     3661 ccggataggt cgcggcaagc aggttctcga cattgccgcc ggtttccagc gcgagtttcg
     3721 cgacatttcc gacgaagtcc tggaacttct cgttcttggc aacgaaatcc gtctccgagt
     3781 tgacctcgac gatggcgccg cgattacctt cgacggcgac cccgacaagc ccttcggcgg
     3841 cagttcgacc ggctttcttg gcggcagccg aaaggccctt ggcgcggagc cagtcgaccg
     3901 aggcttccat gtcgccgttg ttctcggcca gcgccttctt gcagtccatc atgccggcgc
     3961 cggtgcgctc gcggagctcc ttgacggatg cggcggtgat ctcagccatt ctgaatttcc
     4021 tttcactccc ctcccgcgca cgggagggta aaatacttac gcttccagcg cggcttcggc
     4081 cgggggctcg gccatttcac cgatgtccac gcccttcgac tgcgcctctc cggcgcggcc
     4141 ggcagtggct gccgaagcga tcgaatcgca atagagccgg attgcgcggc ttgcgtcgtc
     4201 attgcccgga accgggaagg caattcccgt cggatcgctg ttcgaatcga ggatcgcgac
     4261 gaccgggatg ccgagcgtgt tcgcttcctt gaccgcaagc tcttccttgt tggtgtcgat
     4321 cacgaacatg acgtcgggaa ggccgcccat gtcgcggatt ccccccagcg acttttcgag
     4381 cttgtcacgc tcgcgggtca gctggagtac ctccttcttg gtcagtccgg tggtgtcgcc
     4441 tgacagctgc tcctcaagcg tcttgaagcg cttgatggag ttcgagatcg tcttccagtt
     4501 ggtcagcatt ccgccgagcc agcggtgatt gacgaaatgc tggcccgatg cctgcgcgct
     4561 ctcggcgata gcgtcctgcg cctggcgctt agtgccgacg aacaggacct tgccgccgcg
     4621 tgcggttgtc tgttggacga attcgagagc gcgcgcgaac aacggcacgg tctgcgacag
     4681 gtcgatgatg tggactccgt tgcggtcgcc gaagatgtac ggcttcatcc gcgggttcca
     4741 gcgatgggtc tggtggccga aatgcactcc ggcctcgagc aattgctgca tcgtgacgac
     4801 agtagccgcc atggtctttc tccttccggt tctgcctcgg cgaagccagt caccagccaa
     4861 tcggccggca ccggtatgtc agctccgcct gtgggatgcg gcgcgcccta gccgaacagc
     4921 gccgtcgatt caacaccttg cagataagta cgacgctccg cttgacaaag gggaacaaag
     4981 caggaacatt gcttcgtccc aacggcgccg acgtgcggac cggcgccact ttcgaacagg
     5041 gatgactacg atgcttggac cgctttttaa cctgcttttc ctcgcctgct tctggatcgc
     5101 cgggagcctt gcgcttcagc aaatctacga caaccgaagc gctattgttg acgcgctttc
     5161 ggggcgcggc ggggtgaagc ggcttccccg gcccgccggc gcttgacggc cgcatagctt
     5221 gcaatgctga acggaagcac tgcgagatag atcaaagcga tcgcgagaag ggttatccac
     5281 gggttggtga cgagcgccgc accgagaagt cc
//
LOCUS       DATAKH010000210         9796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_29255,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000210 DATAKH010000000
VERSION     DATAKH010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9796
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29255"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..488)
                     /gene="fdxA"
                     /locus_tag="VHN55_08760"
     CDS             complement(150..488)
                     /gene="fdxA"
                     /locus_tag="VHN55_08760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HEX2804052.1"
                     /translation="MTYVVTDACIKCKYMDCVEVCPVDCFYEGEVMLVINPNECIDCG
                     VCEPECPVEAIKPDTESGLEKWLELNTTMSADWPNITRKKDSPADADEHKGEEGKYDK
                     YFTPDPGEGD"
     gene            complement(517..789)
                     /locus_tag="VHN55_08765"
     CDS             complement(517..789)
                     /locus_tag="VHN55_08765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEX2804053.1"
                     /translation="MRIDRFLYCIRLAKSRTLAQAIVESGHVRIDGKRVEKPSDAVRA
                     GSVVALPLHGRTRILKVLCLPARRGPAPEARACYEELGVDEGSGAT"
     gene            857..1111
                     /locus_tag="VHN55_08770"
     CDS             857..1111
                     /locus_tag="VHN55_08770"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEX2804054.1"
                     /translation="MDAPIGWALEDGGKALLRSFEFRDFSEAFAFLTRVALHAEKADH
                     HPEFTSVWNRVDFRLTSHDSGGITDRDRKLAESITSLAGR"
     gene            complement(1130..1468)
                     /locus_tag="VHN55_08775"
     CDS             complement(1130..1468)
                     /locus_tag="VHN55_08775"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2804055.1"
                     /translation="MNALTFPKREPKRSRVFLTGQVDAGSGPIDVRIRDISTTGALLE
                     SDFAPKGGDTLELACGSTSLQARVAWADRGWFGVEFFTPLLVGDLVDAAGTKLQVSAP
                     RSYHSGEPLD"
     gene            1584..2099
                     /locus_tag="VHN55_08780"
     CDS             1584..2099
                     /locus_tag="VHN55_08780"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX2804056.1"
                     /translation="MAADAPQREYRSGSDQRTLRDALGSFATGVTVVTCVDEQERPFG
                     LTVNSFTSVSLNPPLLLVCIAKRARCAPALASAPFFAVNVLQTGQQPASIRFSARDED
                     RFGATPWSTGETGAPLLMESLGVFECERHAVHDGGDHDILIGRVIRASFDPQMDPLLY
                     FRGRYRRLHFD"
     gene            complement(2096..3052)
                     /locus_tag="VHN55_08785"
     CDS             complement(2096..3052)
                     /locus_tag="VHN55_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HEX2804057.1"
                     /translation="MPSGLVALLDDVATIAKLAASSLDDVSAAAGKATTKATGVVIDD
                     TAVTPRYVIGLAPERELPIIGKIAWGSVKNKLLLLLPAALILTAFAPFLITPLLMVGG
                     SYLAFEATEKILEKLLHEHAHEEKLLDALPDPVELEKLQVAGAIRTDLILSAEIMAIA
                     LANLEGLSLTATGFALGGVALAITAGVYGVVALIVKLDDIGLHLAERSNRAAQAVGNG
                     LVHIVPKMLSALSVIGTAAMLWVGGGILVHGLEVLHIAAVIPETIHHVAEAAAHVAGI
                     IPGVIAWLVGALGSAVVAFIVGGAITFVVRQLTTHPEKLVVD"
     gene            3107..4366
                     /gene="serS"
                     /locus_tag="VHN55_08790"
     CDS             3107..4366
                     /gene="serS"
                     /locus_tag="VHN55_08790"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEX2804058.1"
                     /translation="MLGIDFIKANPEAVEAAIDAKGVSLDVGEIVTLDGEVRALKTEI
                     DRLRAERNAVSGRFKDASPEEKAELGRKAKEAGARASELEKSLGDKQEALRALLLLVP
                     NIPFEGAPVGPDESFNTVIRTVGEPPEFGFDLLDHVALIEKNDWADLSRITQVSGSRT
                     YCLKGRLALLETKLMGWALGEIADAGFTPITVPAIARPEAFFNQGQFPGHMEETYHIP
                     ADDLWLAGTAEVALTSLHSGEIIEADKLPILYAGYSPCFRREAGSAGKDVRGLLRVHQ
                     FVKVEQYVICEADEAVSADWHAKLLGLAEQLLADLEIPYQVIETSTGDMGLGKYRMND
                     IESWVPSLGKYRETHSCSTLHDWQARRANIRYRGNDGKVRFAHTLNNTALASPRILVP
                     LLENHQTEDGRVRLPKALQELMGGEFL"
     gene            4386..5048
                     /locus_tag="VHN55_08795"
     CDS             4386..5048
                     /locus_tag="VHN55_08795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804059.1"
                     /translation="MLVGHYSASFAARAANRSIKLWVVVGAAQLLDILWSIFVIAGLE
                     RVEPAAGVTEGLAFVHYPWSHSLAAAAAWSLVGFVAGKLLKAGTKGSFLVAAVVLSHW
                     FFDALVHHADLPLWPGGGPLVGLALWNYPLAELALELVLFLAAGALLAPLWRSNGLPA
                     WRIPAFLAFGVLFMAATRLAPPPQEVDQAVVGATGLAAYLLFVALAWAVERPLPARAK
                     AE"
     gene            5045..5752
                     /locus_tag="VHN55_08800"
     CDS             5045..5752
                     /locus_tag="VHN55_08800"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2804060.1"
                     /translation="MSDSGAPGMLSRVKEVGALASRFWRGFGHKGPRGPENGPPALVI
                     PGFIANDRTTMELRRALAEAGFRVHPWRHGINWGARPDTLDRLRRAAELCGHDEPILL
                     VGWSLGGLYARELARAQPERVRAVVTLGTPVWGDRRRYTNVWRLYEWVARHPVDDPPI
                     AESEDKPPVPTLAIWSRRDGIVGVPSARGTEATRDREAEVNSTHMGFAVSKRGTRAAV
                     AEIVKFLREIEAPESHD"
     gene            5811..6509
                     /locus_tag="VHN55_08805"
     CDS             5811..6509
                     /locus_tag="VHN55_08805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="recA-like protein"
                     /protein_id="HEX2804061.1"
                     /translation="MAEGLSLVAGGAVSARVEHSRLPSGLGERWSTPAPSSPTFSELF
                     AASPRDSGWAGFLLPQLDRSKPVLWVQERMAALESGRIYPPGLGGIDIIHVEARDARA
                     ALWAMEEGVRCSALSAVIGELWGDPAALDFTATRRLAVASERTGVWCWLVRLAGHANL
                     SGARMRWRIGSAPSLANPLDSRAPGSPAWDAELFRARGIPPGRWTVAHDSDRFHLVAG
                     AGDRALGEVERLRA"
     gene            6433..7911
                     /locus_tag="VHN55_08810"
     CDS             6433..7911
                     /locus_tag="VHN55_08810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017664060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6504 family protein"
                     /protein_id="HEX2804062.1"
                     /translation="MTRTASIWLPALAIERWAKSSGFAPDVPVVLTVEGTHGPVIHAV
                     TEAAAACGARAGARLTDARALDPSLIAIPADPTGDEALLQRLAKWAQRWSPLVEVDGE
                     DALRLDVSGVAHLFGGETALAEDVRVRFAALGLTARIAIAPTSAAAWAFSRFGGNELQ
                     PLHVSALRLAPDTIRTLERLGLKTIGALTALPRLALARRFRGAEDVLDALDRALGRKP
                     EPLTALIEDPPPRASLRLEEPATHVEAATQALKRLIPKLVTELEERHLGVRKLSFHGF
                     RVDGSVAAASVATAIPSREPKHLERLLADKAAALDPGFGFDAFALAADWSESLDAAQE
                     SLIEEPGGTRNLARLVDRLTVKLGRRAVRRPKPFESHLPERASSWRAALEKAEPIELP
                     PTPPRPQRLLDRPEAIAVVYATPEGVPRRFVWRRSVHDIARVEGPERIAPEWWRERST
                     ARLRDYYRVEDEAGRRYWIFREGLIGDGRGGAPNWFIHGLFG"
     gene            7911..>9796
                     /locus_tag="VHN55_08815"
     CDS             7911..>9796
                     /locus_tag="VHN55_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEX2804063.1"
                     /translation="MPEREGFARKKLVRDGPKPRIAPAPYVELGVTTPFSFLRGASDS
                     IELALRALELGMDSIGIADRNTLAGVVRMHSACTGAGLKPLIGCRLDLGDAPSLLAYP
                     IDRDGYGRLSRLLSLGKMRAAKGECELTLDDVATHSDGIAFIAWPEGDLDAFELELQR
                     LRDVIPSLHHVAAAYLYRGGDVARIERLDRIARANGFTILATNDVHYHAPEKRPLQDV
                     MTCIREKTTIEKAGFLLNPNAERHLKSPEEMGRLFARWPHAIEATREFADSLNFGLDE
                     LRYEYPKETVPEGKSPQDYLEQLTWDGAKEKWPEGLPEKVEKQLRHELALIEKLDFAR
                     YFLTVHDIVAFARGLDPPILCQGRGSAANSAVCYCLGITAVDPSTSDLLFERFISEER
                     REPPDIDVDFEHERREEVIQHIYEKYGRDRAGIAATVIHYRPKSAIREVGKVMGLSED
                     VCGALASTIWGHMEGEMAEARAADAGLDLSDPHLKRTIKLAGQMIGMPRHLSQHVGGF
                     TLTERPLTETVPVGNGAMEDRTFIEWDKDDIDELGILKIDVLALGMLTCIRKCFDLVR
                     EHHGEDWELATVPAEEPAVYDMLCRGDSLGVFQVESRAQMNMLPRLKPRCFYDLVIEV
                     AIVRP"
BASE COUNT         1648 a         3094 c         3340 g         1714 t
ORIGIN      
        1 ctgaacatga aggggagtgt tgcgaccatc aggagcgcta cgccagcata gcccgcaccc
       61 gcgcgtctta cgaagccgtt cattcggcca ctttgtgcca tattgccgag tgtccgcaat
      121 gggtcgaaaa cggacgctag cgaataccgt cagtcgccct cgcccgggtc cggggtgaaa
      181 tatttgtcgt acttgccctc ttcgcccttg tgttcgtcgg cgtcggcggg gctgtccttc
      241 ttgcgggtga tgttgggcca gtcggccgac atggtcgtgt tgagctcgag ccacttttcc
      301 agacctgatt cggtatcggg cttgatcgcc tcgaccgggc attccggctc gcagactccg
      361 cagtcgatgc actcgttggg attgatgacc agcatcactt cgccctcgta gaagcagtcg
      421 acggggcaga cctcgacgca atccatatat ttgcatttga tgcaggcgtc ggtgacgacg
      481 taggtcatat cggcatttgc tccctttggc cgttcgctaa gttgcgccgc ttccctcgtc
      541 aacgcccagt tcctcgtaac acgctcgagc ctccggcgcg gggccgcggc gggcgggcag
      601 gcacagcacc ttcaggattc gcgttcggcc gtgcagcgga agggcgacga cgcttccggc
      661 gcggaccgcg tcgcttggct tttccacgcg cttgccgtcg atccgaacgt gaccagactc
      721 gacaatcgcc tgggccaggg ttcggctctt cgccagccgg atgcagtaaa ggaaacggtc
      781 gatccgcaac gctggtcgtg gctccttcgc ggcggcgcta tgctatgcga aggcggcttt
      841 ggacaggaga aagacgatgg acgcgccgat cggttgggct ctcgaggacg gcggcaaggc
      901 attgctccgt agcttcgagt tcagggattt cagcgaagcg ttcgccttcc tgacccgcgt
      961 cgccttgcac gcggagaagg ccgaccatca cccggagttc acgagcgttt ggaatcgcgt
     1021 cgacttccgc ctcaccagcc acgattccgg cggaatcacc gatcgcgacc gaaagctcgc
     1081 cgaatcgatc acgtcattgg ccgggcgctg acgccccgaa ggcgaagggt cagtccagcg
     1141 gttcgccgga gtgatagctg cggggtgccg agacctgcag tttcgtgccc gcagcgtcga
     1201 cgagatcgcc gacaaggagc ggcgtgaaga actcgactcc gaaccagccg cggtcggccc
     1261 aggcgacgcg agcttgcagg ctagtagagc cgcaggccag ttccagtgta tcgccgccct
     1321 tgggcgcgaa atcggattcg aggagcgcgc ccgtggtcga gatgtcgcgg attcgcacat
     1381 cgatcggtcc cgagccggcg tccacttggc cggtgaggaa aacgcgcgag cgtttcggtt
     1441 cgcgcttcgg aaaggtcagt gcgttcatcg cggaactccc ggttcgcacc actttggccg
     1501 cagttgagct aacaaacccc taacgaaagt tgcatcgcct cttcgagtgg aggtttcggc
     1561 tggccccgct ataggcttca cgaatggccg ccgacgctcc ccagcgcgaa tatcgaagcg
     1621 gatcggacca gcgaacgctt cgcgacgcgc tgggaagctt cgcgaccgga gtgacggtcg
     1681 tgacttgcgt cgacgagcag gagcgcccgt tcggcctcac cgtcaacagc ttcacatccg
     1741 tgtcgctaaa tccgccgctg ctgctggtgt gcatcgccaa gagggcgcgc tgcgcgccgg
     1801 cgctggcgag cgcgccattc ttcgccgtca atgttttgca gaccggccag cagcccgcct
     1861 cgatccgctt ttcggcgcgc gatgaagacc gtttcggcgc gaccccctgg tcgacgggcg
     1921 aaacgggggc gccgctgctg atggaatcgc tcggcgtttt cgaatgcgaa cgccacgcgg
     1981 tccatgacgg cggcgaccac gacatcctga tcggccgggt catccgggcg agcttcgatc
     2041 ctcagatgga tccgctgctc tatttccgcg gccgctaccg ccggcttcac ttcgactagt
     2101 cgacgaccag cttttccgga tgggtagtca gctggcgcac gacgaaggtg atcgctccgc
     2161 ctacgatgaa agcgacaacc gccgatccca gcgctccgac tagccaggca atgaccccgg
     2221 ggataattcc ggcgacgtgg gccgcggctt cggcgacgtg atggatggtt tccggaatga
     2281 cggcggcgat gtggagcact tcgagcccgt ggacgaggat tccgccgccg acccacagca
     2341 ttgccgcggt gccgatcacc gacaatgcgc tgagcatctt gggaacgatg tggaccaggc
     2401 cgttgccgac cgcctgggcg gcgcgattgc tccgctcggc caaatgaagc ccgatgtcgt
     2461 cgagcttcac gattagcgcc acgacgccat agacaccggc ggtgatcgca agcgcgacac
     2521 cgcctagagc gaatccggtg gcggtgaggc tgaggccttc gaggttggct agcgcgatcg
     2581 ccatgatttc cgccgacagg atgaggtcgg tgcggatggc gccggcgacc tggagcttct
     2641 cgagctcgac gggatcggga agcgcgtcga gaagcttctc ctcatgggca tgctcatgga
     2701 gcagcttttc gagaattttc tcggtggctt cgaaggcgag gtagctgccg ccgaccatca
     2761 atagcggggt gatcaggaac ggagcgaaag cggtcaggat cagcgcggct ggaagaagca
     2821 ggagcagctt gttcttgacc gagccccagg cgatcttgcc gatgatcgga agctcgcgct
     2881 cgggagcaag gccgatgacg tagcgcggcg tgacggcggt gtcgtcgatc acgacgcccg
     2941 ttgctttcgt cgtcgctttg ccggcggccg ccgagacatc gtcgagcgac gacgccgcga
     3001 gcttggcgat agtggcgacg tcgtcgagca gagcaaccag tccggatggc atggccccgc
     3061 ttaggcgaac ttgcggatgg agcgcaattc gcgcacttgg ctgtccatgc tgggcatcga
     3121 tttcatcaag gccaaccccg aggcggtcga agccgcgatc gacgcaaagg gcgtgtccct
     3181 cgatgtcggc gaaatcgtga cgctcgacgg cgaggttcgc gcgctcaaga ccgagatcga
     3241 ccggcttcgc gccgagcgca acgcggtcag cggccgtttc aaggacgcga gccccgaaga
     3301 gaaagccgag ctggggcgca aagccaagga ggcgggcgcg cgcgcttccg agctggaaaa
     3361 gagcctcggc gacaaacagg aggcgctccg agcgctgctt ctgctggtcc ccaacatccc
     3421 cttcgaaggc gctccggtcg gcccggacga aagtttcaac accgtcatcc ggacggtcgg
     3481 cgagccgcca gagttcggct tcgatctact cgaccatgtc gcccttatcg agaagaacga
     3541 ctgggccgac ctgtcgcgga tcacgcaggt gtcgggatcg cggacctatt gcctaaaggg
     3601 ccggctggcg ctgctggaaa cgaagctgat gggctgggcg ctgggcgaga tcgccgacgc
     3661 cggattcacg cccatcaccg tgccggcgat cgcccggccc gaagcctttt tcaatcaggg
     3721 ccagttcccc ggccacatgg aggaaaccta ccatatccct gcggacgatc tttggctggc
     3781 gggcaccgcg gaggtggcgc tgacctcgct ccattcgggc gagatcatag aggccgacaa
     3841 gctgccgatc ctctacgcag gctattcacc ctgcttccgc cgcgaagcgg gaagcgcggg
     3901 caaggacgtg cgcggcctgc ttcgggtcca tcagttcgtg aaggtcgaac agtacgtgat
     3961 ctgcgaggcg gacgaggcgg tttcggccga ttggcacgcg aagctgctcg gccttgcgga
     4021 acagctgctt gcggacctcg aaatccccta ccaggtgatc gagacgtcga ccggcgacat
     4081 gggtctgggc aagtaccgga tgaacgacat cgagagctgg gtcccgagcc ttggcaagta
     4141 tcgcgagacc cacagctgtt cgacgcttca cgactggcag gcgcggcggg cgaacatccg
     4201 ctaccgcgga aacgacggca aggtgcggtt cgcgcacacg ctcaacaata cggcgctggc
     4261 ttccccaaga atcctcgtcc cgctgctgga gaaccaccag acggaggacg ggcgggtgcg
     4321 gcttcccaag gcgctacagg agctgatggg gggcgagttc ctctgagcgc ggtcggagca
     4381 gcgcggtgct ggtagggcat tattcggcct ccttcgctgc cagggccgcc aaccgaagca
     4441 tcaagctgtg ggtggtcgtc ggggcagcgc agcttctcga catcctgtgg tcgatcttcg
     4501 tgatcgcggg attggagcgt gtggagccgg cggccggagt caccgagggg ctcgctttcg
     4561 ttcactaccc gtggtcgcac agccttgcgg cggcggccgc ctggtcgctg gtagggttcg
     4621 tcgcgggcaa gctgctgaag gccgggacga aagggtcgtt tctcgtagca gcggtggtgc
     4681 tgtcgcactg gtttttcgac gcgctggtgc accatgccga cctgcctttg tggccgggcg
     4741 ggggcccgct ggtcggcctg gcgctgtgga actacccgct ggccgagcta gcgctcgagc
     4801 ttgtcctgtt tctagcggcc ggcgcgctgc tggcgccgct gtggcgctct aacgggctgc
     4861 cggcgtggag gatcccggca ttcctggctt tcggcgtcct gtttatggca gcgacacgcc
     4921 tggccccgcc tccgcaagag gtggaccagg cggttgtcgg cgcgaccggg ctggccgctt
     4981 atctgttgtt cgtggcgctt gcatgggcgg tcgagcgccc tctgccggcc cgagcgaagg
     5041 cggaatgagc gatagcggcg caccgggcat gctgtcgcga gtcaaggagg tcggtgcgct
     5101 cgccagccgt ttctggcgcg gtttcgggca caaggggccg cggggcccgg aaaatgggcc
     5161 gccagcgctc gtcattcctg gcttcatcgc gaacgatcgc acgacgatgg agcttcggcg
     5221 ggcgctcgcg gaagcgggat tccgggttca cccgtggcgg catggcataa actggggcgc
     5281 gcggcctgac actctcgacc gtttgaggcg cgccgccgag ctgtgcggcc acgacgagcc
     5341 gattcttctc gtcgggtgga gccttggcgg cctttacgcg cgggaactgg cgcgggcgca
     5401 gccggagcgg gtgcgggccg ttgtgaccct cggcactccg gtttggggcg accgacgccg
     5461 ctacacaaac gtctggaggc tctacgaatg ggtcgcgcgc catccggtcg acgacccgcc
     5521 gatcgccgag agcgaggaca agccaccggt accgaccctc gccatctggt cgcggcgcga
     5581 cggcattgtc ggcgttccgt cggcaagggg aaccgaggcg actcgcgacc gggaggcgga
     5641 agtcaactcg acgcacatgg gctttgcggt gtcgaagagg ggtacgcggg cggctgtcgc
     5701 tgaaatcgtg aagtttctca gggaaattga agcgcccgag tcgcacgatt gactctttcc
     5761 agcgactcgc tggataagaa caaacaaaga acaaaagcgt tgtgagtcgt gtggctgaag
     5821 gattgtccct ggtcgccggc ggagctgtct ccgccagggt cgaacattct cgtctcccca
     5881 gcgggttggg cgagcgctgg agcacgcccg cgccgtccag ccccaccttt tccgagctgt
     5941 tcgctgcttc cccgcgagac agcgggtggg ccggcttcct attgccgcag cttgatcgat
     6001 cgaagccggt gttgtgggtg caggagcgga tggcggccct ggaaagcggg cgaatctatc
     6061 cgcccggcct tggcggcatc gacatcatcc atgtcgaggc gcgcgatgcc cgtgccgcgc
     6121 tgtgggcgat ggaggagggg gtaagatgct ccgctctctc ggccgtgatc ggcgaattgt
     6181 ggggagaccc ggcagcgctc gacttcaccg ccacccggcg gcttgcggtc gcgtcggagc
     6241 ggactggcgt ttggtgctgg ttggtgaggc tggccggaca tgcgaatttg agcggtgcgc
     6301 ggatgcgctg gcggatcgga agcgcgccgt cgctggcgaa tccgctcgac tctcgggcgc
     6361 cggggtcgcc cgcctgggac gccgagctgt tccgggcgcg agggattccg ccgggccgtt
     6421 ggaccgtcgc gcatgactcg gaccgcttcc atctggttgc cggcgctggc gatcgagcgc
     6481 tgggcgaagt cgagcggctt cgcgcctgac gtccccgtcg tccttaccgt cgagggcacg
     6541 catggccccg tcatccacgc cgtcaccgag gccgccgcgg catgcggggc gagagccgga
     6601 gcgcggctga ccgacgcgcg ggcgctggac ccaagcctga tcgcgatccc tgccgatccc
     6661 accggtgacg aagcgctttt gcagcggctg gcgaaatggg cgcagcgctg gtcaccgttg
     6721 gtcgaggtgg acggcgagga tgcattgcgt ctcgatgtca gcggagtggc gcatctgttt
     6781 ggcggggaga cggcgctggc cgaggacgtg cgggtgcggt ttgcggcgct ggggctgacg
     6841 gcccggatcg cgattgcgcc gacgtccgca gctgcctggg ccttcagccg cttcggcgga
     6901 aatgagcttc agccgctgca tgtgtccgcg ctgcggctgg caccggacac aattcgaacg
     6961 ctcgaacggc tcgggctgaa gacgatcggc gctctcacgg ccctgccccg gctggcgctg
     7021 gcgcggcggt ttcgcggcgc cgaagacgtc ctcgatgcgc tcgaccgcgc gctcgggcga
     7081 aagccggagc cgctgaccgc gcttatcgaa gacccgcccc cgcgggcgag ccttcgcctc
     7141 gaagaaccgg cgacccatgt cgaagcagcg acacaggcgc tcaagcggct cattcccaag
     7201 ctcgtcactg agttggagga gcgacacctc ggcgttcgca agctgtcatt ccacggtttc
     7261 cgggttgatg gcagcgtcgc ggcagcctcg gtcgcgacgg caatccccag tcgcgagccg
     7321 aagcatcttg aacggttgct cgccgacaag gccgcggcgc tcgatccggg tttcggcttc
     7381 gatgcgttcg cattggctgc cgactggagc gaaagcctcg atgccgcgca ggagagcctg
     7441 atcgaagaac cgggcgggac tcgcaatctc gcccggctgg ttgaccggct gacggtcaag
     7501 ctcggtcgtc gtgcggtccg ccgcccgaag ccattcgaaa gccaccttcc cgagcgcgcg
     7561 agtagctggc gagcggctct cgaaaaagca gagccaatcg agctcccgcc gacgccgccg
     7621 cggccccaac gcctgctcga ccggcccgaa gcgatcgccg tcgtctatgc gacccccgaa
     7681 ggggtgccgc gccgcttcgt ctggcggcgc tcggtgcacg acatcgcccg cgtggagggg
     7741 ccggagcgga tcgcgcccga atggtggcgc gagcgatcga ccgccaggct tcgcgattat
     7801 tatcgggtcg aggacgaggc cggccgccgc tactggatct tccgcgaagg actgatcggc
     7861 gacggccgcg gcggagcccc gaactggttc atccacgggc tgttcggctg atgcccgaga
     7921 gagaaggctt cgcccgcaaa aagctggtcc gcgacggccc gaagccccgg atcgcgcccg
     7981 cgccctatgt cgagcttgga gtcaccacgc ctttttcgtt cctgcgcgga gcgtcggatt
     8041 cgatcgagct ggcgcttcgg gcgctcgagc tggggatgga ttcgatcggg atcgctgatc
     8101 gcaacacgct cgccggcgtg gtgcgcatgc acagcgcctg tacaggcgct gggctcaagc
     8161 cgctaatcgg ctgcaggctg gatctcggcg atgcgccgag cctgctcgct tacccgatcg
     8221 accgggacgg ctatgggcgg ctgtcgcgac tgctgagcct cggcaagatg cgcgccgcca
     8281 agggcgagtg cgagctgacg ctggacgacg tcgccaccca ttccgacggc attgccttca
     8341 tcgcctggcc ggaaggcgac ctcgatgcgt tcgagcttga attgcagcgg ctccgtgacg
     8401 tcattccttc gcttcaccat gtcgctgcgg cctatcttta tcgcggcggc gacgtcgctc
     8461 ggatcgagcg gctcgaccgc atcgcccggg cgaatggctt caccatcctg gcgaccaacg
     8521 atgtccatta tcacgcgccg gagaaacgcc cgctgcaaga cgtgatgacc tgcatccgcg
     8581 agaagactac gattgaaaaa gcgggattcc ttctaaaccc gaatgccgag cggcatttga
     8641 aatcgcccga ggaaatgggg cggctgttcg cccgctggcc gcacgcgatt gaagcgaccc
     8701 gcgagttcgc cgactcgctg aacttcggcc tcgacgagct gcgttacgaa tatccgaaag
     8761 agacggtgcc ggaaggcaaa tccccgcagg actatcttga gcagctgact tgggatgggg
     8821 caaaggagaa gtggcccgaa gggcttccgg aaaaggtcga aaagcagctt cgccacgaac
     8881 tggcgcttat cgagaagctc gacttcgcgc gctacttcct gaccgtccac gacatcgtcg
     8941 cctttgcgcg gggactcgac ccgccgatcc tgtgccaggg ccgcggctcg gccgcgaaca
     9001 gcgcggtctg ttattgcctc gggatcaccg cggtcgaccc gtcgaccagc gacctcctct
     9061 tcgagcgatt catttccgag gagcgccgcg agccgcccga tatcgatgtc gatttcgagc
     9121 atgagcggcg cgaggaggtg atccagcaca tctacgagaa atacggccgc gaccgcgccg
     9181 ggattgccgc gaccgtgatc cattaccggc ccaagtcggc gatccgcgag gtcggcaagg
     9241 tgatggggct ttccgaagat gtgtgcggag cgctcgcatc gaccatctgg ggccatatgg
     9301 aaggcgagat ggccgaagcg cgcgcggccg acgccgggct cgacctgtcc gatccgcatt
     9361 tgaagcgaac gatcaagctg gccgggcaga tgatcggaat gccgcgccac ctgtcgcagc
     9421 atgtcggcgg cttcaccctt accgagcggc cgctgaccga gacggttccg gtcggcaacg
     9481 gagcgatgga ggaccgaacc ttcatcgaat gggacaagga cgacatcgac gagctcggca
     9541 tcctcaagat cgacgtgctc gcattgggca tgctgacctg catccgcaaa tgcttcgacc
     9601 tggttcggga acatcatggc gaggactggg agctggcgac cgtcccggcc gaggagccgg
     9661 cggtctacga catgctgtgc cgcggcgatt cgctgggcgt gttccaggtc gaaagccggg
     9721 ctcagatgaa catgctcccg cgcctcaagc cgcgctgctt ctacgacctc gtcatcgagg
     9781 tcgcgatcgt ccgccc
//
LOCUS       DATAKH010000211         2067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_33277,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000211 DATAKH010000000
VERSION     DATAKH010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33277"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..587
                     /locus_tag="VHN55_08820"
     CDS             153..587
                     /locus_tag="VHN55_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019052559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804064.1"
                     /translation="MARFLAGALASFLMITGAFLMWQGRAEDAPALPPPPDKPAVPSM
                     IAKKPDAPPAATPKSREEKRFNRADRDNDGKIVLEELLQPRRKSYAKLDKDGDGKLSF
                     TEWAHTTIDKFNGADSNRNGQLTRAEYATTAPKPRKKPKCAC"
     gene            complement(588..1832)
                     /locus_tag="VHN55_08825"
     CDS             complement(588..1832)
                     /locus_tag="VHN55_08825"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2804065.1"
                     /translation="MPALAQEQPIEPIELPPSIEQGVDLIYIDPEIKPEIDRRNELLQ
                     SFGFQDWAGAPIDLFVPVNDTYTELRRGLMKYKQRWGALPQVQIPTGAAMKAGAKDER
                     VTLLRQRLGLSAGDSFDSALEKQVRAYQSAHGLTSDGIVGNGTIASLNRGADHYERLI
                     ILNMERARRLPTSSDKGRYILVDAGAARLYMYEDGKAVDSMNVIVGDKERQTPMMAAE
                     LRFVQLNPYWNVPPDLAANLVAKRVLEQGLTYLTERDYEVLSDWTDEATLVDPATVDW
                     RGVADGRVDIRLRRGPGPWNSMGEVKFMIPNDFGIYLHDVPDPEEPMFASNDRWISNG
                     CIRLQDAKRLQKWVFGTAPKPSGAADERVDVPDPVPVYITYFTAAPTADGVAFRPDRY
                     DRDEKLLARVKLDARPVDVAAN"
BASE COUNT          376 a          647 c          681 g          363 t
ORIGIN      
        1 agcgcgcgac ctcgagagcg acgaggccga aggcgccgcc gcgcgcgcgg cggcaatgct
       61 ctcgcaccgc tggagcgggc ggatcggttg acaggggcgc gtccggaatg gactgtgttt
      121 gggccgaatc tcctaatgta agaggagtgt tcgtggcgcg tttcctggcc ggggctttgg
      181 cctctttcct gatgatcacc ggcgcgttcc tgatgtggca aggccgcgcg gaggatgctc
      241 cggcgctgcc gccgccgccg gacaagcccg cagtcccgtc gatgatcgcg aagaagccgg
      301 acgctccgcc ggcggcgacc ccgaaaagcc gcgaggaaaa aaggttcaac cgggccgacc
      361 gcgacaacga cgggaagatc gtactcgaag agctgctgca gccgcgacga aagtcttatg
      421 cgaagctgga taaggacggc gacggcaagc tgtcgttcac cgaatgggcg cacaccacga
      481 tcgacaaatt caatggcgcc gactccaacc gcaacggcca gctcacccgc gccgaatatg
      541 caaccaccgc gcccaagccg cgcaagaagc cgaagtgcgc gtgctgatca gttggcagcg
      601 acgtctaccg gccgtgcgtc gagcttgacc cgggcaagga gcttttcgtc gcggtcgtag
      661 cggtcgggcc ggaaggcgac tccgtccgcg gtcggcgcgg cggtgaaata ggtgatgtag
      721 accgggacag gatcgggaac gtcgacgcgc tcgtccgccg ccccgctcgg cttcggcgcg
      781 gtgccgaaaa cccacttctg aagccgcttc gcgtcctgga gacggatgca gccattgctg
      841 atccagcggt cgttgcttgc gaacatcggc tcttcgggat cgggcacgtc gtgcaggtaa
      901 atcccgaagt cgttggggat catgaacttg acctcgccca tcgaattcca cgggcccggc
      961 ccgcgacgca gccggatgtc gactcgcccg tcggccacgc cccgccagtc gacggtggcc
     1021 ggatcgacca gggtcgcctc atcggtccag tcagacagca cctcgtaatc gcgctcggtc
     1081 aggtaggtga ggccctgttc gagaacccgc ttggcaacaa ggtttgccgc aagatcaggc
     1141 ggcacgttcc aatagggatt gagctgaacg aagcgaagct cggccgccat catcggagtc
     1201 tggcgctcct tgtcgccgac gatgacgttc atgctgtcga cggccttgcc gtcctcatac
     1261 atgtagagcc tggccgcgcc ggcatcgacg aggatgtagc ggcccttgtc cgatgacgtc
     1321 ggaagccgcc gggcgcgctc catgttgagg atgatcaggc gctcataatg gtccgcgccc
     1381 ctgttcagcg acgcgatggt gccgttgccg acgatcccgt ccgacgtaag cccgtgcgcg
     1441 gactggtagg cgcggacctg cttttcgagg gctgaatcga agctgtcgcc ggccgacagg
     1501 ccgagccgct ggcgaagcag cgttacccgt tcatcctttg ctccggcttt catggcagca
     1561 cccgtgggga tctgaacctg tgggagagcg ccccagcgct gcttgtactt catcagcccg
     1621 cggcgaagct cggtgtaggt gtcgttgacg ggcacgaaca ggtcgatcgg agcgccggcc
     1681 caatcctgga agccgaagct ttgcagcagc tcgttgcggc gatcgatctc cggcttgatc
     1741 tcgggatcga tgtaaatgag gtcgacgcct tgctcgatgc tcggcggaag ctcgatcggc
     1801 tcgatcggtt gctcttgcgc aagcgcgggc atggaaacgg ctgcggccaa ggccgcgcat
     1861 agtacaaatc ccaccttcat ggcggcgagc ttaccagccc cacctgaacg gttccagaat
     1921 cgctcgccgc gaatttcggg tgccttgtcg ccggagttct tgttttgttc tagtcgccgc
     1981 gtaagagtag cggaatggtc accgagtcga ttcgagggcg cggagcgacg cgaaactcaa
     2041 ccccgatgcg cttcaatctc aaggagc
//
LOCUS       DATAKH010000212         6961 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_13549,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000212 DATAKH010000000
VERSION     DATAKH010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6961
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13549"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="VHN55_08830"
     CDS             <1..385
                     /locus_tag="VHN55_08830"
                     /EC_number="2.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEX2804066.1"
                     /translation="IFTASGGARMQEAVLSLMQLPRTTVAIRELKEAGLPYIVVLTDP
                     TTGGVTASYAMLGDIQIAEPGALIGFAGQRVIEQTIREKLPEGFQRAEYLLEHGMIDM
                     VVPRHELKDKLSSIIGYLTPEKKAA"
     gene            388..1698
                     /locus_tag="VHN55_08835"
     CDS             388..1698
                     /locus_tag="VHN55_08835"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014848694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="folylpolyglutamate synthase/dihydrofolate
                     synthase family protein"
                     /protein_id="HEX2804067.1"
                     /translation="MADFARSDSAAVQAQLDRLAKLSPGGDRLGLDRITRLLDRLGRP
                     QDRLPPVFHVAGTNGKGSTCAFLRAILEASDFAVHTFTSPHLVRFNERIRVAGKLIED
                     DELAARLEEVLDSSDGIEPSFFEATTAVAFLAFAGTAADACVVEVGLGGRLDATNVIE
                     KPLVCGIAGLGVDHRQWLGRRISDIAAEKAAIAKPGVPLVTQRYPPAAAQQVQQRAEK
                     VGAVWIGRGALWDARVIRGNIRLHDRSGALKLPMPRLPGRHQAENAALAVEMLRSQDR
                     LEIPEQAYGRGLLEAKWPARLQKLGSGPLTKRLAQGSELWLDGGHNAAAARLLADHAR
                     RGFSDDLPLAIIFGSISTKDPRAMLKPFRGLAAEVHCIPVADHDHHSPEDLAALARGL
                     GFKSSANSTLAEAIGRVNAPARVLMFGSLYAAGEALRANGEIPD"
     gene            complement(1695..3068)
                     /locus_tag="VHN55_08840"
     CDS             complement(1695..3068)
                     /locus_tag="VHN55_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX2804068.1"
                     /translation="MATAAVTAERTGFFGTIAPYFRPMPFVAFLLGISSGFPLTLLLA
                     TMTYWLSKVGIEKSTIGFAIGLTTPYTLKFLWAPLVDKMPLPVLTRMFGQRRAWLFFI
                     QALLFAALWQLGASDPASGLALFAVWAIVVAFLSATQDIVIDAYRIEILTDEELPYGT
                     AMNQFGYRTGNLIAGAGTIYLASTEGAGLGWAVAYGLTGLAVLPAAIAALFAGPGRYV
                     ERHIRKAGQSFGAWVRETVWNPFKEFLTRHGAFLILAFVLVYKIGDAMGQVMLGPMIN
                     ELGFSDTEYIAVNKFVGFWALIVGSALGAPFIKWLGMGRALFVSGLLMMFSNLLFAAL
                     AATGRSDVMLALAVGTENLTSGIGLTVFVTYLSGLSSLAYTATQFALLSSFAAVGRTW
                     MSTPAGFIAEGFGWVGFWLFTVAAAVPGMILLWIMWSKGFVVETVRQPGTEDDEEITP
                     SGKLKSA"
     gene            3182..4321
                     /locus_tag="VHN55_08845"
     CDS             3182..4321
                     /locus_tag="VHN55_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008602253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX2804069.1"
                     /translation="MDAPISVLRPSAGQRALADALARGEAALGSGILELESSAYTDEA
                     RFETEQRKIFAKLPLVIGPSALLPHGNLAFTHDGFGVPLLVTRDSGGEVHVMANVCRH
                     RGTRLVESAEVVSAKGIACPYHAWTYGPDGALKGVPRADCFPGLDKSEKSLVRFAAAE
                     AGGLIWFARDEQADFGPAQALAPDFDAFGMAGLHLYERRTHAVAANWKQIVDAFLESY
                     HVQRLHAGTIANFFADGITAADRIGPHQRAVVGRADYLANVDRDDWAQLRRAVTFTYM
                     MFPASVLVVSPDYINLLVIMPQSVGTSLVEDFMLIPEPPTTPEADAHWRKSWELLDGG
                     TFAGEDFRAAALCQQGLSSGFLDKVTLGTLESGIADFHARVEAML"
     gene            complement(4318..4806)
                     /locus_tag="VHN55_08850"
     CDS             complement(4318..4806)
                     /locus_tag="VHN55_08850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019514862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2804070.1"
                     /translation="MALGAFGWQSFYYPAGGLMLFGKRKRIVKRILIVEDEPLTAFDN
                     EVTLADLGYEVVATLDRFSQAIELLDREQVDLVLSDVRLTGKHSGFDLARASKERGIP
                     VLFSTGHKVPEEAKALAVGCLSKPYTERQLKNALEEVDKLLAGEAVKSAKGFELYPRV
                     ES"
     gene            4843..5580
                     /locus_tag="VHN55_08855"
     CDS             4843..5580
                     /locus_tag="VHN55_08855"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEX2804071.1"
                     /translation="MSAGRDDGPQRIAKLLARAGVASRREIERMIAEGRIAVEGEVLT
                     TPATLLTSLSGVTVDGKPVRAAQSTRLFRFYKPQGTITAERDPKGRPTIYDRLPKGLP
                     RLMPVGRLDFMTEGLLLLTNDGELKRKLELPSSAVVRHYRARAFGQVSQVELEKLAEG
                     VTIEGMHYGSINANLERRTGRNCWIELSLTEGKNREVRRVLEHLGLKVSRLIRTAYGP
                     FDVGGLEPGAVDEISRTVLTEFQSALK"
     gene            5577..6113
                     /gene="rsmD"
                     /locus_tag="VHN55_08860"
     CDS             5577..6113
                     /gene="rsmD"
                     /locus_tag="VHN55_08860"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008065433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEX2804072.1"
                     /translation="MRIIAGEWRGRKLIAPEGTATRPTGDRVRETLFSMLASRIGQFD
                     QLRVADLYAGTGALGLEALSRGAAFACFVEQDARAIAAIRANIAALGASERTRIIRGT
                     AESLPSEQPFDLIFADPPYAAGSGSRALAQIIGAAWAAPGSWVAIETRRGERIEPAAC
                     AVEAERDVGRARITLFRV"
     gene            complement(6094..6345)
                     /locus_tag="VHN55_08865"
     CDS             complement(6094..6345)
                     /locus_tag="VHN55_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804073.1"
                     /translation="MSAADALVGLIESPLVADIIAAGAAAALASFTHHRLSRRRETGT
                     KQALKDAAGAAATAMAARLSEELEEILEAGKASAKPGKA"
     gene            6583..>6961
                     /locus_tag="VHN55_08870"
     CDS             6583..>6961
                     /locus_tag="VHN55_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008996335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEX2804074.1"
                     /translation="MAETKQDAVALLKQDHDEVEKLFESYNSATGSKRKQELARKICR
                     ELTIHAQIEEEIFYPACKGKVDEDLLKEGYVEHDAAKLLIAEIEAGEPSDEFYDAKMK
                     VLCEEIDHHVKEEEKRMEGLFAQA"
BASE COUNT         1278 a         2267 c         2231 g         1185 t
ORIGIN      
        1 aatcttcaca gcctcgggcg gagcgcggat gcaggaagcg gtgctgtcgc tgatgcagct
       61 gccgcgaact acagtggcaa ttcgcgagct caaggaagcg gggcttccct atatcgtcgt
      121 cctcaccgac ccgacgactg ggggtgtgac ggcctcttac gcgatgctgg gcgacatcca
      181 gattgccgag cccggcgcac tgatcggctt tgccgggcag cgagtgatcg agcagacaat
      241 ccgcgagaag ctgcccgagg gattccagcg ggcggaatat ctgctcgagc acgggatgat
      301 cgacatggtc gtcccgcgcc acgagctgaa ggacaagctt tccagcatca tcggctatct
      361 gacgccggag aagaaggcgg cctgagcatg gccgatttcg cgcggtcgga cagtgccgcg
      421 gtccaggccc agctcgaccg tctcgccaag ctttcgcccg gcggcgaccg cctcggcctt
      481 gaccggatca cgcgcttgct ggaccggctt gggcggccgc aggaccgact tcctccggtt
      541 tttcacgttg ccggtacgaa tgggaaaggc tccacctgcg cgttcctgcg cgccatcctc
      601 gaagcctccg atttcgcggt ccacactttc accagtcctc acctggtccg gttcaacgag
      661 aggatccggg tcgccggcaa gctcatcgaa gacgatgagc tcgcggcacg tctcgaggag
      721 gtgctcgact ccagcgatgg catcgagccg agctttttcg aagcgacgac ggccgtcgcg
      781 ttcctcgcct ttgccggtac ggctgccgat gcctgtgtgg tcgaagtggg cctcggcggg
      841 cggctcgacg caacgaatgt gatcgagaaa cctctggtgt gcggaatcgc gggccttgga
      901 gtcgaccatc gccagtggct tggacgccga atcagcgaca tcgccgccga aaaggcggct
      961 attgccaagc ctggtgtccc cttggtcacc cagcgctacc cgcccgccgc cgcgcaacag
     1021 gtgcagcaac gggccgagaa ggtcggcgcc gtctggatcg ggcgcggagc gctgtgggat
     1081 gcacgcgtga tccggggcaa tatccggctc cacgaccggt cgggagcact caagcttccg
     1141 atgccgcggc tgccgggacg gcaccaggcg gagaatgccg cactggcggt ggaaatgctc
     1201 cggagccagg accggctcga aattcccgaa caagcctatg ggcgcggcct gctagaagcg
     1261 aaatggccgg ctcggctgca aaagctggga tcgggcccgc tgacgaagcg gcttgcgcaa
     1321 ggcagcgagc tctggcttga cggaggccac aatgcggcgg cagcacgact gctcgccgat
     1381 catgcccgcc gcggcttctc cgacgacttg ccgctcgcca tcatcttcgg gagcatttcg
     1441 accaaggatc cgcgggcgat gctgaaaccg ttccgcgggc ttgcggccga ggtgcattgc
     1501 attcccgtcg cggatcacga ccatcactcg cccgaggatc tcgccgctct cgctcgcggt
     1561 ctcgggttca aatcgagcgc caactcgacg cttgccgagg cgatcggccg agtgaacgcg
     1621 ccggcgcggg tgctcatgtt cggctcgctc tatgccgccg gcgaggcgct acgggcgaac
     1681 ggcgagattc ccgattaggc cgacttgagc tttcccgacg gagtaatctc ctcgtcgtcc
     1741 tcggtgccgg gctggcggac cgtctcgacg acgaagccct tgctccacat gatccataac
     1801 aggatcatcc cgggcacggc ggcggccaca gtgaacagcc agaagccgac ccagccgaat
     1861 ccttccgcga tgaatccagc gggcgtcgac atccaggtcc gcccgactgc cgcgaacgac
     1921 gaaagcagcg cgaactgggt ggccgtgtag gcaaggctcg acaagccgga caaatacgtg
     1981 acgaagaccg tcagcccgat accgctggtc aggttttccg tgcctacggc aagcgcgagc
     2041 atcacgtccg accggccggt cgctgcgaga gccgcgaaca gcaggttgga gaacatcatc
     2101 aggagtcccg agacaaacag cgcccggccc attccgagcc acttgatgaa cggcgcgccc
     2161 aaggccgagc cgacgatcag ggcccagaac ccaacgaact tgttcacggc gatatattcg
     2221 gtgtccgaaa agccgagctc gttgatcatc ggcccgagca tcacctgccc catcgcgtcg
     2281 ccgatcttgt agaccaggac gaaggcgagg atcaggaagg cgccatggcg ggtcaggaac
     2341 tccttgaacg ggttccacac tgtctcgcgc acccacgcgc cgaagctctg tcctgccttg
     2401 cggatgtgcc gctcgacgta gcgcccgggc ccggcgaaca gcgccgcgat cgccgccgga
     2461 agaacggcta gcccagtcag gccataggcc accgcccaac caaggccggc accctcggtc
     2521 gacgcaagat agatcgtccc ggcgccggcg atcaggtttc cggtccggta gccgaactgg
     2581 ttcatggccg ttccgtacgg cagttcctca tcggtcagga tctcgatgcg gtaggcgtcg
     2641 atgacgatgt cctgggtcgc cgaaaggaag gcgacgacga tcgcccacac ggcgaacaga
     2701 gcgagcccgc tcgccgggtc gcttgcgcca agttgccaca aggccgcgaa cagcagcgcc
     2761 tggatgaaga aaagccaggc ccgccgctgc ccgaacattc gagtcaggac cggcagcggc
     2821 atcttgtcga ccagcggcgc ccacaggaat ttcagcgtgt agggagtcgt caggccgatc
     2881 gcgaaaccga tcgtcgattt ttcgatcccg accttcgaaa gccagtaggt catcgttgcc
     2941 agcagcagcg tgagcggaaa tccgctcgat atgccgagca ggaacgcaac gaacggcatc
     3001 ggccggaaat aaggtgcaat cgtcccgaaa aagcccgtcc gttcagccgt tactgctgct
     3061 gtcgccatgc cccgtcctct tcgcttgtcc ttgcggcgat gattaacagc cccggcgcgc
     3121 ctgaacaggg ggtgagtgac tgctcttgca tggcagcatg gttgggcgca ccaaagcgcc
     3181 aatggacgca ccgatctccg tccttcggcc aagtgccggc cagcgcgcgc ttgccgatgc
     3241 gctggcgcgc ggcgaggcgg cgctcggaag cggaatcctg gagctggagt ccagcgccta
     3301 tactgacgag gcgcggttcg aaaccgagca gcggaagata ttcgcgaagc ttccgctggt
     3361 catcggtccc tcggcgcttc tcccgcacgg caaccttgcc ttcacccacg acggctttgg
     3421 cgttccgctg ctcgttaccc gcgattccgg cggcgaagtc cacgtgatgg ccaacgtctg
     3481 ccgccaccgc ggaacccggc tggtcgaaag cgccgaagtc gtctcggcaa aggggatcgc
     3541 ctgcccctat cacgcctgga cctacggccc cgacggtgcg ctcaaaggtg tcccgcgggc
     3601 cgactgcttc cccgggctcg acaagtcgga gaagtcgctg gtgcgctttg cggcggccga
     3661 agccggcggg ctgatctggt tcgcccgcga cgagcaggcc gatttcggcc cggcccaggc
     3721 gctcgcgccg gatttcgacg cgttcggaat ggccggcctc cacctgtacg agcgccggac
     3781 tcatgccgtc gccgccaact ggaagcagat cgtcgatgcg ttcctggaaa gctaccatgt
     3841 gcagaggctg cacgcaggca cgatcgccaa tttcttcgcc gacgggatta ccgccgccga
     3901 ccgtatcggc ccgcaccagc gcgccgtcgt gggccgtgcg gactatctcg cgaacgtcga
     3961 tcgcgacgac tgggcccagc ttcggcgggc agtcaccttc acctatatga tgttcccggc
     4021 atcggtgctg gtggtgagcc cggactacat caacctgctg gtgatcatgc cgcagtcggt
     4081 cggcacatcg ctggtcgagg atttcatgct gattcccgag cctcccacga cgccggaagc
     4141 cgatgcccat tggcgcaaga gctgggagct gctggacggc ggcaccttcg ccggcgaaga
     4201 cttccgggcc gcagcgctgt gccagcaagg gctgagctca gggtttctcg acaaagtcac
     4261 gctggggacg ctcgaaagcg gaatcgcgga tttccacgcg cgcgtcgagg cgatgcttta
     4321 actctccacc cgcgggtaca gctcgaaccc cttcgcagat ttgacggcct cgccggcaag
     4381 cagcttgtcg acctcttcca gggcattctt gagctgcctt tcggtgtacg gcttgctcag
     4441 gcaaccgact gcaagcgcct tcgcttcctc cggcaccttg tgaccggttg aaaagagcac
     4501 cggaatgccg cgctcctttg aagctcgggc aagatcgaag ccgctgtgct ttccggtaag
     4561 cctgacatcg ctgaggacaa gatcgacctg ctcccggtcg agcagctcaa tcgcctggct
     4621 gaaccggtcg agcgtcgcga cgacttcgta cccgaggtcg gcgagcgtca cttcgttgtc
     4681 gaacgcagta agcggctcat cctcgacgat gaggatgcgc ttgacgatgc gcttgcgctt
     4741 gccgaacagc atcagacccc cagcaggata atagaagctt tgccatccga acgcaccaag
     4801 cgccatccag tgccgcgccg acgccgctcc gaaaggccgc gcgtgagcgc cggccgcgac
     4861 gacggcccgc agcggatcgc gaagctgctc gctcgcgctg gggtcgcttc ccgccgcgag
     4921 atcgagcgga tgatcgccga ggggcgcatt gcggttgaag gcgaagtgct gacaacgccc
     4981 gcgacccttc tcaccagcct cagcggagtg acggtggacg gcaagccggt tcgggcggcg
     5041 caatcgactc ggctgttccg gttctacaag ccgcaaggca cgattaccgc cgagcgcgat
     5101 cccaagggcc ggccgaccat ctatgaccgc cttccgaaag gccttccgcg actgatgccg
     5161 gtcgggcggc tggacttcat gaccgaaggc ctgctgctgc tgaccaacga cggcgagctg
     5221 aagcgaaagc tcgagctgcc gagcagcgca gtggttcgcc actatcgcgc ccgcgccttc
     5281 ggccaggtca gccaggtgga gctcgaaaag cttgccgaag gcgtgacgat cgaagggatg
     5341 cattacggat cgatcaacgc caatctcgag cggcggaccg gccgcaactg ctggatcgag
     5401 ctcagcctca ccgaaggcaa gaaccgcgaa gtgcggcggg ttttggagca cctcgggctg
     5461 aaggtctcac gactcatccg cacggcctat ggcccgttcg acgtaggcgg gctggagccg
     5521 ggggcggtgg atgagatttc gcgaaccgtc ctcactgagt tccagtcagc cctcaagtga
     5581 ggattatcgc gggcgaatgg cgcgggcgga agctcatcgc gcccgaggga acggcaactc
     5641 gcccgacggg cgaccgagtt cgagaaacgc tcttttccat gctcgccagc cggatagggc
     5701 agttcgacca gcttcgcgtt gccgacctct acgcggggac cggcgcactc gggctggaag
     5761 ccctgtcgcg cggagccgct ttcgcctgct tcgtagagca ggacgctcgt gcgatcgccg
     5821 ccatccgggc gaatatcgcg gcgcttggcg cttccgagcg gaccaggatt atccggggta
     5881 ccgcggagtc ccttccgtcc gagcagccgt tcgacctgat tttcgccgat ccgccctatg
     5941 cggcgggttc gggctcgcgt gccctcgcac aaatcatcgg cgcagcttgg gccgcaccgg
     6001 gaagctgggt tgccattgag accaggcgcg gcgagcggat cgagccggcg gcttgcgctg
     6061 tggaggcgga acgcgacgtc ggccgcgctc ggatcacgct tttccgggtt tagcgctcgc
     6121 cttgcccgct tcgaggattt cttcgagctc ttccgacagc ctcgccgcca tcgccgtcgc
     6181 tgctgcgccg gcggcatcct tgagcgcctg cttcgttccg gtttcgcggc ggcggctgag
     6241 ccggtgatga gtgaaggacg cgagagcagc ggccgcaccc gccgcgatta tgtccgcgac
     6301 cagggggctc tcgatcagcc ccacgagcgc atctgccgcg ctcattggcg gttccgattt
     6361 cgcggacgcg gatttgggtc ttttgccacc gcgatttcgc gttgacgctg ccgccggctt
     6421 tcgcgccttc gacgcctttg cccgcggctt ggccggcgct ttcggcttag tcgtcgtctt
     6481 tttcgccatc accgtccttt cgctgctgcc tcgcaaacgc tgctgcgcag gaacatgtcc
     6541 aaagcgcaaa cagttttggc ttgagaaaaa ggagtaacgt tgatggccga aaccaaacag
     6601 gatgcagtcg cgcttctcaa gcaggaccat gacgaagtcg aaaaactctt cgaatcctac
     6661 aacagcgcga ctgggtcgaa gcgaaagcaa gagctggcgc ggaaaatctg ccgcgagctc
     6721 accattcacg cccaaatcga ggaagagatt ttctaccccg cctgtaaggg caaggtcgac
     6781 gaggatctgc tgaaggaagg ctacgtcgag catgacgccg ccaagctact gatcgccgag
     6841 atcgaggctg gcgagccgag cgacgagttc tacgatgcga aaatgaaggt gctctgcgaa
     6901 gagatcgatc accacgtgaa ggaagaagag aagcgcatgg agggcctctt cgcccaggcg
     6961 a
//
LOCUS       DATAKH010000213         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_29348,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000213 DATAKH010000000
VERSION     DATAKH010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29348"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /locus_tag="VHN55_08875"
     CDS             <1..685
                     /locus_tag="VHN55_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019516982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbamoyl phosphate synthase small subunit"
                     /protein_id="HEX2804075.1"
                     /translation="DWPGLEGMDLAKDVSRLQIERWTGGRWQWGEGYEMGGDDESRPH
                     VVAVDYGNKRNIFRNLVEAGARVTVVPASATFEEIMAHEPDGFFLSNGPGDPAATGEY
                     AVPVIRQMLESGKPLFGICLGHQMLALAVGGKTSKMFQGHRGANHPVKRLADGRVEIT
                     SMNHGFAVEREGLPENVRETHVSLFDDSNCGIELTDKPAFSVQYHPEASPGPQDSFYL
                     FEKFVGMMR"
     gene            686..>1882
                     /gene="carB"
                     /locus_tag="VHN55_08880"
     CDS             686..>1882
                     /gene="carB"
                     /locus_tag="VHN55_08880"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007683288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEX2804076.1"
                     /translation="MPKRTDISSILIIGAGPIVIGQAAEFDYSGSQAVKALKAEGYRV
                     IVVNSNPATIMTDPELADATYIEPITPGFVASIIEKERPDAVLPTMGGQTALNTALAL
                     AKNGTLEKFGVELIGANAAAIEKAEDRLKFREAMDKIGLESPRSAIAHSLEEAVAALE
                     TVGLPAIIRPSFTLGGTGGGIAYNREEFERIVSGGLEASPTTEVLIEESVLGWKEYEM
                     EVVRDRNDNAIIICSIENIDPMGVHTGDSITVAPALTLTDKEYQRMRSASIAVLREIG
                     VETGCSNVQFAVDPKSGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     ISNDITGGATPASFEPTIDYVVTKIPRFAFEKFKGAEALLSTSMKSVGEVMAIGRSFA
                     ESLQKAL"
BASE COUNT          369 a          562 c          651 g          300 t
ORIGIN      
        1 ggactggccg gggctcgaag gcatggatct ggccaaggac gtcagccgac tgcagatcga
       61 gcgctggact ggtggccgat ggcagtgggg cgaggggtac gagatgggcg gtgacgatga
      121 gtcacgcccg cacgtcgtcg ccgtcgacta tggcaacaag cgcaacatct tccgcaacct
      181 cgtcgaagcc ggcgcgcggg tgacggtggt gccggcgagc gcgacgttcg aagagatcat
      241 ggcgcacgag ccggacggct tcttcctgtc gaacgggccg ggcgatccgg cggcgacggg
      301 cgaatatgcg gtgccggtga tcaggcagat gctggaaagc ggcaagcctt tgttcgggat
      361 ctgcctcggc caccagatgc tcgcgctcgc ggtcggcggg aagaccagca agatgttcca
      421 gggccaccgc ggcgccaacc acccggtcaa gcgcctcgcc gacggccggg tcgagatcac
      481 cagcatgaac cacggcttcg cggtcgagcg cgaggggctg ccggagaatg tccgcgagac
      541 ccacgtgagc ctgttcgacg acagcaattg cgggatcgaa ctgaccgaca agccggcgtt
      601 cagcgttcaa taccaccccg aggccagccc gggaccgcag gacagcttct acctgttcga
      661 gaagttcgtg gggatgatgc ggtagatgcc caagcgcacc gacatttcct ccatcctgat
      721 catcggcgcg gggccgatcg tcatcggcca ggctgcggag ttcgattatt cggggtcgca
      781 ggccgtcaag gcgctgaagg ccgagggcta tcgagtcatc gtcgtcaatt ccaacccggc
      841 gacgatcatg accgacccgg agcttgccga cgcgacctat atcgagccga tcacgcccgg
      901 cttcgtcgcc agcatcatcg agaaggagcg gccggatgcg gtgcttccga cgatgggcgg
      961 gcagacggcg cttaacaccg cgctggcgct ggcgaaaaac gggacgctgg agaagttcgg
     1021 ggtcgagctg atcggcgcca atgcggcggc gatcgagaaa gccgaggacc ggctgaagtt
     1081 ccgcgaggcg atggacaaga tcgggcttga atcgccccgc tcggcgatcg ctcattcgct
     1141 tgaagaggcg gtcgcagcgc tggaaactgt gggcttgccc gcgatcatcc gaccgagctt
     1201 cacgctcggc gggacgggcg gcgggatcgc ctacaaccgc gaggagttcg agcggatcgt
     1261 ctcgggcggg ctggaagcat cgcccaccac cgaagtgctg atcgaggaat cggtgctcgg
     1321 ctggaaggaa tatgagatgg aggtcgtccg cgacaggaac gacaacgcca tcatcatctg
     1381 ctcgatcgag aatatcgacc cgatgggcgt gcacaccggg gacagcatca ccgtcgcacc
     1441 cgcgctgacg ctgaccgaca aggaatatca gcggatgcgc tcggcgagca tcgccgtgtt
     1501 gcgcgaaatc ggtgtcgaaa caggctgttc gaacgtgcag ttcgcagtcg atccgaagtc
     1561 aggccggctg atcgtgatcg agatgaaccc gcgcgtgtcg cggtcttctg cgctagcgtc
     1621 gaaggcgacg ggcttcccga tcgccaaggt cgccgccaag ctggcggttg gctacacgct
     1681 cgacgagatt tccaacgata tcactggcgg cgcgacgccc gcgagcttcg agccgaccat
     1741 cgattatgtg gtgaccaaga tcccgcgctt cgccttcgag aagttcaagg gcgcggaggc
     1801 gctcctatcg acctcgatga agtcggtcgg cgaggtgatg gcgatcgggc gcagttttgc
     1861 ggaaagcctg caaaaagcgc tg
//
LOCUS       DATAKH010000214        12256 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_33341,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000214 DATAKH010000000
VERSION     DATAKH010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 12256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12256
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33341"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VHN55_08885"
     CDS             complement(<1..574)
                     /locus_tag="VHN55_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEX2804077.1"
                     /translation="MNELVVRIAARGDGVTASGRHVPFAVPGDAVLDDGALAFGAHHQ
                     QPPCRHFPECGGCQLQHADDEAYSGYLVSRVETALAQHGLGTEIRRPHLLPPCSRRRA
                     TVKVLKLGQGAVVGFNAEKSHRIVDMHECHILRPELFALVQPLRQLFAALLKPKRGAE
                     AQLTLVDGGVDVLLRNVAADGLAAIEALTEL"
     gene            complement(571..1929)
                     /locus_tag="VHN55_08890"
     CDS             complement(571..1929)
                     /locus_tag="VHN55_08890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEX2804078.1"
                     /translation="MTERPILTAEAMRAAEQGAIDSGTPVETLMERAGAALAEATNRY
                     AGPLPVLVLCGPGNNGGDGYVAARHLAAQGIPVRVASLADPKSDAAKWARSGFDGEVE
                     PLTEKTEQAAVVIDCLFGTGLNKGVEDSAVKQLFRLSEAASVAVACDLPTGIGSDSGE
                     LLSAVPEFDLTVTFGALKPAHRLMPAMMRCGRLVLGDIGIEADTQWHEIGAPKLLPLD
                     SAGHKYDRGLVHALAGKMPGAIALAATAAARSGAGYVRVSTSRAIDGLPSAVVQTDTA
                     NLDDEQIGCILIGPGMGDIPQLLTLALTSRAPKVIDADAIGQLGEPERLRGQEAILTP
                     HSGEFGQLFGEVPGTKAEQALEASRRSGAVLVYKGPDTLVAAPDGRLGFAPPAPAWLA
                     SAGTGDVLAGMIAALVARRMPAFDAACAAVWLHGRAAEIAGPHMIADDLAAAIPAALD
                     LL"
     gene            complement(1939..2748)
                     /locus_tag="VHN55_08895"
     CDS             complement(1939..2748)
                     /locus_tag="VHN55_08895"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017664662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEX2804079.1"
                     /translation="MSGLSETAYAKINLALHVREKLPDGYHRIETVFAFCEHGDELAG
                     ETAPSLSLSISGEFRHGLSTHDNLVVRAANALRNSCGVDRAASLELVKNVPIASGLGG
                     GSADAGAALRLLNRLWDLRLPLERLEEVGRVLGADVPACTRSETARGEGKGDSLDTVE
                     LGLAGTPVLLVNPRIESPTADAYARWDGLDRGPLGDWREGRNDLEAAAVSAIPQIGTV
                     LAWLSAQHGAECVRMSGSGATCFALFDGDAARDQAAMAVPREWWHLATRLR"
     gene            complement(2745..4340)
                     /locus_tag="VHN55_08900"
     CDS             complement(2745..4340)
                     /locus_tag="VHN55_08900"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2804080.1"
                     /translation="MARVPEAPESPATAYVTARAASISGNHGQAAQIYARLAARSSDN
                     ALGERAISEAIRAGDTALALRLIGRAGEASSIDSKLLVIADALKHGRTEQALKFVARS
                     ETGADLSFWDPLVRAWDAAERRNPSGALAILAQVPRNSALFPFVDEESAFILLKAGKA
                     AEAEPYARRAIGSAGAREYRLRLALAAGFAAARDRQRALAMLEGIPGDTTAIRRALDS
                     GGMKSIAIDSAARAFSDQLVALALQLRQSGRDPDSALNTARIAAFAAPDSSSAAILLG
                     TMLAEQGRLANALAVLESVAANDPLKPEALDAQVRALVDNDRKQEALAIAKAAADRSG
                     SGDDFARLGDVYGELDRHVEAAEAYRQAVTRLRVVENARIWPLLLLQASELESAGRWP
                     EAKAALGSAIALAPDEPLILNFLGYSKLERGEDLDAAEALIRKASELAPDNASITDSL
                     GWALYKRGRFDQAIDVLQKAAVGDPAQAEIQEHLGDALYAAGRKFEARFAWQAALATA
                     DEKDTARIRSKIESGLTTATAAR"
     gene            complement(4387..6036)
                     /locus_tag="VHN55_08905"
     CDS             complement(4387..6036)
                     /locus_tag="VHN55_08905"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006967778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEX2804081.1"
                     /translation="MSERESMQYDVVIVGAGPAGLAAAIRLKQLASEAGRELGVCVLE
                     KGSEVGAHILSGAVIDPKALNELIPDWKEKGAPLTVPVTENHHWILGKGGKWEFPHFL
                     LPPFMNNKGTYTLSLGNLCRWLAGQAEELGVEIFPGFAAAEVLFNEDGSVKGVATGDM
                     GVSRDGSHRPDYQPGIELHARYTFLAEGVRGHLTKELTRLFDLRKESGPQVYGLGVKE
                     LWDVPPDKHKPGRVIHTQGWPLEDAWGGGFLYHQDNGQVALGFVVALDYENPYLSPFE
                     EFQRWKTHPAIRAEIEGGRRVSYGARAINEGGWQSVPELVFPGGALIGCSAGFVNVPR
                     IKGTHTAMKSAMLAAEAAFEAVSAGRSSDTLDSYPKALRSSWIAKELKLVRNSQPAVS
                     RWGGLLGTLYSGLDMWLGALGLSLPWTLRHRHADNETLKRKDEVRPIDYPKPDGVISF
                     DRLSSVFLSNTNHEEDQPVHLTLKDADIPVAVNLAEYAGPEQRYCPAGVYEFVEDGGQ
                     PRLQINAQNCVHCKTCDIKDPKQNINWVVPEGGGGPNYPNM"
     gene            6131..6835
                     /locus_tag="VHN55_08910"
     CDS             6131..6835
                     /locus_tag="VHN55_08910"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX2804082.1"
                     /translation="MGGPGIATDDREAASALRWWLEMGVDAAIQETPRNWLDQAPAPA
                     HAAAEPSPSPVPVPETLEAFRDWLATSPDAPLSTPRSKAIFPSGAEGAEVMLLAEPPT
                     RDELACGKPIGGEAAELMERMLAAIGLEGQAYSANLACFHSPGARLSQQQLDQCAAAA
                     RQHIALARPRRVLLLGDAPSRAVLGKPLVEARGHVHKIEGVRTIATFHPRQLLKRPSD
                     KALAWKDLLLLMEESP"
     gene            6832..8553
                     /locus_tag="VHN55_08915"
     CDS             6832..8553
                     /locus_tag="VHN55_08915"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX2804083.1"
                     /translation="MIAEVLLSAGLAAAAQPASPDPLAPLPKAAQPVVPAPQQQGVQP
                     IPTPAVVIPRDWRGVFAAIRAGNWAGAQAGIAALPPDELTPVALAELYTAKGSPTVDL
                     PRLQWLIAQAPDLPDADQLARLAVTRGATSPPPIIPQRRVVGLGSAPARYRGKPVRGE
                     PVADALRTQLDAFIQNNDAASAEAAFLAQAPYLSGDARGEAAQRVAWTYYTTGRDFDA
                     RRVADYWRTGASGEWRSQAAWVSGLASWRLSDCNSAARAFREVAASATQRELAAAGYY
                     WAARSEQACRRPQAVQGLLQAAAASPESFYGLIARETLGTETRIPASPPVATASVEAL
                     PNVRRAVRLVAIGEISLAEEMLRHQAKIGSPADHPALLEIAKRMSLAGAQYWLATNGQ
                     SGVRVDMASRYPRPAWNPVRGWRVDPGLAYAHIIQESNFRSSAVSPVGAVGLMQVRPG
                     SASDEAAAAGLPYSYSALFDPTYNLEFGQSFIERMRRSPNTGGQLPKVIASYNAGPVP
                     VGRWASIPDKGDPLLWIESLPYWETRYYVPAVMRNMWVYQGLDRQEQVSLKALAQHRW
                     PGFPSSR"
     gene            8609..9352
                     /locus_tag="VHN55_08920"
     CDS             8609..9352
                     /locus_tag="VHN55_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804084.1"
                     /translation="MATIDSSDLAKLRDSRFPELPLDCGNSVRPGIVDTAEWRDWSDV
                     ETTADQLRIEDYLDLFDLSDSDILHIGIGNSGLAQRFADKAKSIFGTSVVESEVEQAN
                     SLDLPNYRAVIHNKHSGGDERIPAAFDFIIDNNPTTFCCCLEHLARMLELYANRLSPS
                     GQVVTDRVGLGWTTDAPGSNRRWAFSFDDLAAAAALAGLTAARAGPTIYTLSVGRPRR
                     PGIIARWSYEIRTNVRRIARRLKRAAGLK"
     gene            9349..10323
                     /locus_tag="VHN55_08925"
     CDS             9349..10323
                     /locus_tag="VHN55_08925"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HEX2804085.1"
                     /translation="MIATPMPSFSIVIPTFQRRDAVCEAVRALGKLHYDGQVEVIVVV
                     DGSTDRTEAALQAIDCPFPKTILSQDNKGAAAARNRGAAEATGEIILFLDDDMLCESD
                     TLEQHARMYKDGADAVIGDFPIDPGSPQGFLTDWIAEKAHWDREGTALTPFEIFTGHL
                     SVRRAVFEDLGGFDESFTAGGHYGNEDIDFGARLLERYQVRHNPQAITRQRSTVSPRQ
                     FMRRARSLARNDLRFAAKHPKLARELFARRGAGRTSRRLRLLSRIPLMPATLGAVSLF
                     AAEIGLKTRFRSSRKLSYLIHGAWLAAYWSEVRAGGRPDSDASGAADL"
     gene            10453..11409
                     /locus_tag="VHN55_08930"
     CDS             10453..11409
                     /locus_tag="VHN55_08930"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX2804086.1"
                     /translation="MAKELRSRVPRRPRPAILMYHRIADDSFDPWGTVASPGNFADQL
                     SWLSGNRTLLPLPRFAELHRSGSLPADSLAITFDDGYRCSAEVAAPLLEQFRIPATMF
                     LPVEWIEKSATYWWDELEEIVLGHDGDSLHVGGREIALGQRQSGDRRWTFGSGPRTPR
                     QSAFDRICRDLSTSSPKDVESAMGELRRQAGTRTPSAPAKRPMTPEQVRAVASVLIGF
                     GSHALRHPWLPSLAPDEQALEIGSSVDRCEALSGARPVAFAYPFGATDENSRRLVEEA
                     GFNCACSTEDGGVAPSSSVFSLPRVHVGNWTAAGLKRALASL"
     gene            11406..>12256
                     /locus_tag="VHN55_08935"
     CDS             11406..>12256
                     /locus_tag="VHN55_08935"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX2804087.1"
                     /translation="MKRKATRIWYKLWSRAAPREKTSAAGLVVSPFVTTAPMRALLDW
                     RPDWKTEAVGRILGHRAGTFVDIGANVGQSLSDFVLAPVRSTYVGFEPNLICYQHLAK
                     LVADNALHQCHVVPAGLGDRNGIVELYRYGGDVDAGTTTVRELRPRLEVVADSGCVFR
                     LDDIGDRIPEPEISLIKIDVEGSEIEVLRGMRSTIERTRPWILCEVLHRDLFAEPEPY
                     RQRCAELIRLVVGMGYVVLHVVQDDQGASIKGLETVDAFPDSVWHEEDSLFACDYLFV
                     PEGDSGAA"
BASE COUNT         2053 a         4128 c         3961 g         2114 t
ORIGIN      
        1 caagctccgt cagcgcctcg atagcggcca ggccatcggc agcgacattc cgcagaagca
       61 catccacgcc cccgtcaacc agcgtcagtt gcgcctccgc gccccgcttc ggcttgagca
      121 aggcggcaaa cagctggcgg agcggctgca ccagcgcaaa gagctcgggc cgaaggatat
      181 ggcattcgtg catgtcgacg atccggtgcg acttctcggc gttgaagccg acgaccgcgc
      241 cctgccccaa cttcagcacc ttcaccgtcg cgcggcgcct cgaacacggc ggcaacaggt
      301 ggggccggcg aatttcggtc cccagcccgt gctgcgcgag cgctgtctcg acccgcgaca
      361 cgaggtagcc gctataggct tcatcgtcgg catgctggag ctggcacccg ccgcactcgg
      421 ggaagtgccg gcacggcggc tgctggtgat gtgcaccgaa tgcgagcgct ccatcgtcga
      481 gaacggcatc gccgggcacc gcgaacggca catgccggcc gctggcggtg actccgtctc
      541 cgcgcgcggc aatccggacg accagttcgt tcacagaagg tcgagagcgg cgggaatggc
      601 ggcggcaaga tcgtcagcga tcatgtgcgg gcctgcaatc tcggcggctc gcccgtgaag
      661 ccacaccgcc gcgcatgcag cgtcgaaggc gggcatacgc ctggcgacca gtgccgcgat
      721 catgccggca agaacatccc cggtgccggc gctcgccagc cacgcgggcg ccggtggagc
      781 gaagccaagg cgcccgtcgg gcgcggcaac caaggtgtcc ggccctttat agaccaggac
      841 cgcacctgat cgccgggagg cttccagggc ctgttccgcc ttcgtgcccg gaacctcgcc
      901 gaacagttgc ccgaactcgc cggagtgggg agtcaggatc gcttcctgcc cgcgcagccg
      961 ctccggctcc cccagctggc cgatcgcatc ggcgtcgatc acctttggcg cgcgcgacgt
     1021 cagcgccaga gtcagaagct gcgggatgtc gcccattccg ggaccgatga ggatgcaacc
     1081 gatctgctcg tcgtcgagat tagccgtgtc cgtctggacg accgctgacg gcaggccgtc
     1141 gatggcgcgc gaagtgctca cccggacgta gcctgcgccg gagcgcgctg cagcagttgc
     1201 ggcaagcgcg atggctcccg gcatcttgcc ggcaagcgcg tgaacgaggc cgcggtcgta
     1261 tttgtggccc gccgaatcga gcggaagaag tttcggggcg ccgatttcgt gccattgcgt
     1321 gtccgcctcg attccgatgt cgccgaggac caggcggccg catctcatca tcgcaggcat
     1381 caaccggtgc gcgggcttga gcgctccgaa cgtgacggtc aggtcgaatt cggggaccgc
     1441 actcaaaagc tcaccggagt cgcttccgat tccggttggg aggtcgcacg caacggccac
     1501 ggatgcggcc tccgacagcc tgaaaagctg tttgaccgca gaatcctcca cgcctttgtt
     1561 aaggcctgtt ccgaacaggc aatcgatcac taccgccgcc tgctccgtct tctccgtcag
     1621 cggctcgacc tcgccgtcga agccggaccg cgcccatttc gccgcatcgc ttttcgggtc
     1681 cgcaagagat gcgacccgga cgggaatacc ctgagcggcc aggtgtcggg ctgcgacata
     1741 gccgtcgccg ccattgttgc cggggccgca aaggacgaga accggcagcg gtcccgcata
     1801 gcgattcgtc gcctccgcaa gcgcagcgcc ggcccgctcc atcaaggttt ccaccggtgt
     1861 gccgctgtcg atcgcgccct gctcagcggc gcgcatcgct tcggcagtca ggatgggtcg
     1921 ctcggtcatc ggcgcgactt agcgcaggcg agtcgccaaa tgccaccatt cgcgagggac
     1981 agccattgcc gcctggtcgc gagcggcgtc gccgtcgaac aaagcgaagc atgtagcccc
     2041 gctgccggac atccgcacgc actccgctcc gtgctgcgcc gacagccatg cgaggacggt
     2101 gccgatctgc ggaatcgccg agaccgccgc agcctcgaga tcgttgcggc cttcgcgcca
     2161 gtcgccgagc ggcccgcgat ccaggccatc ccagcgggcg taggcatccg cggtcggaga
     2221 ctcgatcctg ggattgacga gcaggaccgg cgttccggcg agacccagct ccaccgtatc
     2281 gagagagtcg cccttgccct cgccacgggc tgtttcggag cgagtgcagg ccggaacgtc
     2341 ggctccgagc acgcgtccca cctcctcgag ccgctcgagc ggaagccgca ggtcccatag
     2401 ccggttgagg agccgaagcg cggccccagc atcggcagac ccgccgccca atcccgaagc
     2461 gatcggtacg tttttcacca gctcgaggct tgctgcccga tcgacaccac aggagttccg
     2521 aagagcgttc gcggcccgaa cgaccagatt gtcgtgggtc gacagcccgt gtcggaactc
     2581 tccggaaatg gagagcgaga gcgaaggcgc ggtttcgccc gccagttcgt cgccatgctc
     2641 gcagaaggcg aagaccgttt cgatgcgatg atagccgtcc ggaagtttct cgcggacgtg
     2701 caaggctagg ttgatcttgg cgtaagcggt ttcgctcaaa ccgctcaacg cgccgcggtc
     2761 gccgtggtga ggccggattc gatcttgctt cggattcgcg cggtatcttt ctcgtccgcc
     2821 gtcgcaaggg ccgcctgcca ggcgaatctc gcctcgaact tgcggccagc ggcgtagagc
     2881 gcgtcgccga gatgctcctg tatctccgcc tgcgcggggt cgccgaccgc cgccttttga
     2941 agcacgtcga tcgcctggtc gaagcgcccg cgcttgtaga gcgcccagcc gagcgagtcg
     3001 gtaatcgaag cattgtccgg cgcaagctcg ctcgccttgc ggattaacgc ctcggcggcg
     3061 tcgagatcct ctccgcgttc cagctttgaa taaccgagga aattcaggat cagaggctcg
     3121 tcgggcgcga gcgcgatcgc agagccgagc gctgccttcg cctccggcca gcgaccggcg
     3181 gattcaagct cgctcgcctg cagcagcagc agcggccaga ttcgcgcgtt ttcaacaacg
     3241 cggaggcggg tgaccgcctg ccggtacgcc tcggctgcct cgacgtgccg gtcgagctcc
     3301 ccataaacgt cgccgagacg ggcgaagtcg tcccccgatc cgctcctgtc cgccgccgcc
     3361 ttggcaatag cgagcgcctc ttgcttgcgg tcgttgtcga ccagagcccg gacttgtgcg
     3421 tccagcgctt ccggcttcag cgggtcgttc gcggctacgg attcgagcac agccaaggcg
     3481 ttagccagcc tgccctgctc ggcgagcatg gttccgagca agattgccgc cgagctgctg
     3541 tccggagcag cgaaggccgc gatccgggcc gtgttcagcg cggagtccgg gtcccggccc
     3601 gactggcgca gctgcagggc gagcgcgacc agttggtccg aaaatgcgcg agcggcgctg
     3661 tcgatcgcga tagacttcat tccgccggaa tcgagggccc tcctgatggc ggttgtgtcg
     3721 ccgggaatgc cttcgagcat cgccagcgcc cgttgccggt cgcgagcagc cgcaaaaccc
     3781 gccgcaaggg ccagtcgcaa ccgatattcg cgggcgccgg cgcttccgat cgcgcgacgg
     3841 gcataaggct cggcctcggc ggccttgccg gccttcagca ggatgaacgc gctctcctcg
     3901 tccacgaagg gaaacagcgc gctgttgcgc ggcacctgtg caaggatcgc gagagcgccc
     3961 gaagggtttc gacgttcggc cgcgtcccac gccctgacga gcgggtccca gaagctgagg
     4021 tccgctcccg tttcagacct ggcgacgaac ttgagcgcct gttcggtccg gccgtgtttc
     4081 agcgcgtcgg caatgaccaa gagcttcgaa tcgatcgagg acgcttcgcc tgcccgcccg
     4141 atcagccgca gagcgagcgc ggtgtctcct gccctgatcg cctccgaaat cgcacgctcc
     4201 ccgagagcgt tgtcgctcga ccttgccgcc aggcgagcgt agatttgcgc ggcctgccca
     4261 tgattgccgc tgatcgaggc cgctcttgcc gtcacatagg cggtcgccgg gctttcaggc
     4321 gcttccggaa ctcgagccat agccggagcg gcggcgctga ccaggagcgc aagtccgagc
     4381 gagagcttac atgttcgggt aatttggacc tccgccgccc tcgggaacga cccaattgat
     4441 gttctgcttc gggtccttga tgtcgcaggt tttgcagtgg acgcaatttt gagcattgat
     4501 ctgcagtctc ggctgtccgc cgtcctccac gaattcgtaa acgccggccg ggcaataacg
     4561 ctgctcgggg ccggcatatt cggccaggtt cacggcaacg ggtatatcgg cgtcctttag
     4621 cgtcaggtga accggttggt cctcctcgtg gttggtgttc gacaggaaca ccgacgacag
     4681 ccggtcgaag ctgatcacac cgtccggctt cggataatcg atcggccgca cctcgtcctt
     4741 gcgcttcaag gtctcgttgt cggcgtgccg gtgccgcagc gtccagggca gcgacaggcc
     4801 aagagcgcca agccacatgt cgagccccga ataaagcgtg cccagcaggc ctccccagcg
     4861 ggacaccgcc ggctgcgagt tgcggacaag cttcagttct tttgcgatcc agctcgaacg
     4921 gagagccttc ggataggaat ccagggtatc gctgctgcgg ccggcggaga cggcttcgaa
     4981 cgcggcctcc gcggccagca tcgccgattt catcgccgtg tgagtcccct tgatccgcgg
     5041 cacgttcacg aaccccgccg aacagccgat cagcgccccg cccgggaaaa ccagctccgg
     5101 caccgactgc cagccaccct cgttgatcgc ccgggcaccg taggagaccc ggcgtccgcc
     5161 ctcgatttcg gcgcggatcg ccggatgggt cttccagcgc tggaattctt cgaatgggga
     5221 aagatacggg ttctcgtaat cgagcgcgac gacgaagccg agcgcgacct gcccgttgtc
     5281 ctggtggtaa aggaagccgc cgccccacgc gtcctccagc ggccaaccct gagtatggat
     5341 cactcttccc ggcttatgtt tgtcgggagg aacgtcccac aactccttga ctcccaagcc
     5401 gtaaacctgc ggcccactct ccttgcgcag atcgaagagg cgggtcagct cctttgtgag
     5461 gtgcccgcgc acgccctcag cgaggaaggt gtagcgggcg tgcagctcga tcccaggctg
     5521 gtagtcggga cgatggctgc catcacggga cacccccatg tcgccggtcg cgacgccttt
     5581 caccgagccg tcttcgttga acagcacttc ggcagcggcg aagccgggga agatctcgac
     5641 accgagctct tccgcctgcc ccgctagcca gcggcaaagg ttgccgaggc tgagcgtgta
     5701 ggtgccctta ttgttcatga acggcggcag caggaaatgc gggaattccc atttgccgcc
     5761 cttgccgagg atccagtgat ggttctcggt gaccggcacg gtcagcggcg cgcccttttc
     5821 cttccagtcc gggatcagct cgttcagcgc tttcgggtcg atgaccgcgc ccgagaggat
     5881 gtgggcgccg acctcgctcc ccttttcgag gacgcagacg ccgagctcac gcccggcttc
     5941 gctggcgagc tgcttgagcc ggatcgccgc tgcaagcccg gccggcccgg cgccgacgat
     6001 cacgacatcg tactgcatcg actcgcgttc gctcacatcg tctccttctg gcgcgcacca
     6061 agggcagttc ggctctctat ggcgcagccg gtttcttgac gccaccggca atgctgggga
     6121 caagcggcac atgggtgggc caggcatcgc gacggacgac cgcgaagccg ccagtgcgtt
     6181 gcgctggtgg ctggagatgg gagtcgatgc tgcaatccag gaaactcccc gcaactggct
     6241 cgaccaggca ccggcgcctg cccatgccgc cgccgagccc tctccgtctc cggtgcccgt
     6301 tccggaaacg ctcgaggcgt tccgcgactg gctggcaacg agcccggacg caccgctctc
     6361 cactccgcgg tcgaaggcga tcttcccctc cggcgcggaa ggcgcggaag tgatgctcct
     6421 cgcagagccg cccactcgcg acgagctcgc ctgcgggaag ccgatcggcg gtgaggcggc
     6481 cgagctgatg gagcggatgc ttgcggcgat cgggcttgag ggccaggcct acagcgccaa
     6541 tctcgcctgc ttccattcgc ccggcgcaag gctctcgcag cagcagctcg accagtgcgc
     6601 ggccgctgca cgccagcaca ttgccctcgc ccgccccagg cgggtgctcc tgctcggcga
     6661 cgcgccgtcg cgggcggtcc tcggcaagcc tctcgtcgag gcccgcggcc atgttcacaa
     6721 gatcgagggt gtacgaacga tagctacctt ccacccgcga cagttgctca aacggccgtc
     6781 cgacaaggcg ctcgcgtgga aggatctgct gctgctaatg gaagaatcac cgtgatcgcc
     6841 gaggtcctgc tgtccgcggg cctggcagcg gctgcccaac ctgcctcgcc ggaccctctg
     6901 gcgcctttgc ccaaagctgc gcagccggtc gtcccggcac cgcaacagca gggggtccag
     6961 ccgattccaa cgcccgcagt ggtcataccg cgcgactggc gcggcgtgtt tgcggcgatc
     7021 agggctggaa actgggccgg cgcccaggcc ggcatcgccg cgcttccgcc cgatgagctg
     7081 acgcccgttg cattggcgga gctctacaca gccaagggat cgcccacggt cgatctccct
     7141 cgcctgcagt ggctcatcgc gcaagcgccc gacctgccgg atgcggacca gcttgcgcgg
     7201 ctagccgtca cccgcggtgc gacatcgccg ccgcctatca ttccgcagag gcgcgtggtc
     7261 gggcttggat ccgctcccgc acgctatcgc ggcaagcccg ttcgcggaga gccggttgcc
     7321 gatgcgcttc gcacgcagct cgatgcgttc atacaaaaca acgacgcggc cagcgccgag
     7381 gcggctttcc tagcgcaggc gccctatctc tcgggggatg cccgtggtga agcggctcag
     7441 cgcgtggcct ggacctatta taccaccggc cgcgacttcg atgcccggcg agtcgccgac
     7501 tattggcgaa cgggggcaag cggcgaatgg cgctctcagg cggcctgggt gtcgggcctg
     7561 gcgtcatggc gtctgtccga ctgcaactcg gccgcacgcg ccttccgcga agtcgcagcg
     7621 agcgctaccc agcgtgagct ggccgccgcg ggctattatt gggcggcgag gtccgaacag
     7681 gcttgccgca ggccgcaggc ggtccagggc cttttgcagg ccgcagcggc atcgcccgaa
     7741 agcttctatg gcctaatcgc ccgcgagact ctgggcaccg aaacgagaat cccggcctct
     7801 cctccagtcg cgacagcttc ggtcgaggcg cttcccaacg ttcgccgcgc cgtccgcctc
     7861 gtggcgatcg gcgaaatttc gcttgccgag gagatgctcc gccaccaggc gaagatcggt
     7921 tcgcccgccg atcaccccgc gctcctcgaa atcgcgaaga ggatgagcct tgccggcgct
     7981 caatactggc ttgcaacgaa cggccagtcc ggcgtccggg tggacatggc aagccgttat
     8041 ccaaggccag cctggaatcc ggtgcgcggg tggcgcgtcg atccgggact tgcctatgcc
     8101 catatcatcc aggaatcgaa ctttcggtcg agcgcggtga gccccgtcgg cgccgtcggg
     8161 ctgatgcagg tgcggcctgg aagcgcgtcc gacgaagccg ccgcagccgg cctgccctat
     8221 tcctactcgg cgctgttcga tccgacctac aatctggaat tcggccagag cttcatcgaa
     8281 cgaatgcgaa ggtcgcccaa cacgggcgga caacttccga aggtgattgc gtcgtacaac
     8341 gcgggccctg tccccgtcgg ccgctgggcg tccattcccg acaagggcga tccgctgctt
     8401 tggatcgaga gcctgcccta ttgggaaacc cgctattacg tccctgcggt catgcggaac
     8461 atgtgggtct atcagggcct ggacagacaa gagcaggtat cgttgaaagc gcttgcgcag
     8521 caccgctggc cgggctttcc gagttcacgc tagcagccca acggccgcgt ctctggctat
     8581 cgcgggacgc tttgggcagt ttggcgccgt ggcaaccatt gattcgagcg atcttgcgaa
     8641 gctgcgcgac agccgtttcc ccgagcttcc gctcgattgc gggaacagcg ttcggccggg
     8701 gatcgtcgac actgccgaat ggcgcgactg gagcgacgtc gaaaccaccg ctgaccagtt
     8761 gcggatcgaa gattatctcg atctgttcga tctctccgac agcgacattc tccacatcgg
     8821 gatcggcaat tcgggcctcg cgcagcgctt tgcggacaag gccaaatcga tcttcggcac
     8881 cagcgtcgtc gagtccgagg tggaacaggc caattcgctc gacctgccga attaccgcgc
     8941 ggtcatccac aacaagcata gcggcggcga cgagcggata ccggccgctt tcgacttcat
     9001 catcgacaat aacccgacca cattctgctg ctgcctggag catctggcga ggatgctgga
     9061 gctgtacgcg aaccgtctct cgccctccgg ccaggtggtg accgaccgcg tcggactcgg
     9121 ctggaccacg gacgcgccgg gaagcaacag gcgctgggcg ttcagtttcg acgatctcgc
     9181 ggccgcagca gctcttgccg ggctgactgc tgcccgagcg ggcccgacca tctacacgct
     9241 ttcagtcggc cgtccgcggc gccccggcat cattgcgcga tggagttacg agatccgcac
     9301 gaacgtgcgg agaattgcgc ggcgcctgaa gcgagcagct gggctgaaat gatcgcgacc
     9361 cctatgccgt cgttctcgat cgtgattccg actttccagc gtcgcgacgc ggtctgtgaa
     9421 gcggtcaggg ccttgggaaa actccattat gacgggcagg tggaggtaat cgtcgtagtt
     9481 gacggatcca ccgaccgcac cgaagccgct ctgcaggcaa tcgactgccc gttccccaag
     9541 accatcctat cgcaggacaa caagggcgcc gccgcggccc gcaatcgcgg tgccgccgaa
     9601 gcgacaggcg agatcatcct tttcctcgat gacgacatgc tgtgcgagtc cgacacgctc
     9661 gaacagcacg cccgtatgta caaggacgga gcggatgcgg tcatcggcga cttcccgatc
     9721 gatccgggct caccgcaagg attcctgacc gactggatcg ctgagaaggc gcattgggac
     9781 cgcgagggta cagcgttgac tccattcgag attttcaccg ggcacttatc cgtccgccgg
     9841 gcggtcttcg aagacttggg aggatttgac gagagcttca ctgccggagg ccattacggc
     9901 aacgaggaca tcgacttcgg ggcgcggctc ctcgaacgct atcaggtgcg ccacaacccg
     9961 caggcgatca cccgccagcg aagcacggtc agcccgcgcc agttcatgcg ccgcgcccgg
    10021 agccttgccc gcaacgacct gcgcttcgcg gccaagcatc ctaagctcgc gagggagcta
    10081 tttgcccgaa ggggtgcggg ccggacgtcc cggcggcttc gactactcag ccgcattccg
    10141 ctgatgccag ccacccttgg cgccgtttca ctgttcgccg ccgagatcgg cctgaagacc
    10201 cgattccggt cgagccggaa gctgtcgtac ctgatccacg gcgcctggct cgctgcatat
    10261 tggtcggagg tacgggcggg cgggagaccg gattcggacg cgagcggcgc cgcggaccta
    10321 tagccttgcg gcaggggccc cgttatcctc gcctgtcaac aatgtgccgg cggggagctg
    10381 caccttcgga aagtgctggt tgtgattagt ctgagcagga tcagccgcag cctccatcgc
    10441 cgcgggcaaa aggtggcaaa agagcttcgc agccgggttc cgcgccgccc gcgaccggca
    10501 atcctgatgt accaccgcat cgcggacgac agcttcgatc cctggggcac ggtcgcgagc
    10561 ccgggcaatt tcgccgacca attgtcctgg ctatctggca accggaccct tctgccgctc
    10621 ccgcgtttcg cggaactgca ccgaagcggg tcgctaccgg cggactccct cgcgatcacg
    10681 ttcgacgacg gttatcgctg cagtgccgaa gttgccgcgc cactgctgga gcagttccga
    10741 attcccgcga ccatgttcct gccggtcgag tggatcgaaa agagcgcgac ttactggtgg
    10801 gacgagctgg aggagatcgt ccttggccac gacggcgatt cgctccacgt cggcgggcgc
    10861 gaaattgcgc ttggacaaag gcagagcggc gatcgccggt ggacgttcgg ctccggcccc
    10921 cggacgccgc ggcagtccgc tttcgaccgg atatgccgcg atctttcgac cagcagcccc
    10981 aaggacgtag agtctgcgat gggcgagttg cgccgccagg ccggcacgcg aacgccatct
    11041 gctccggcga agcgcccgat gactccggag caggtgcggg cagtggccag cgttctgatc
    11101 ggcttcggat cgcacgcgct ccggcatccc tggcttccaa gcctcgcccc cgacgagcag
    11161 gcgctcgaga tcggctcgag cgtcgatcgc tgcgaggcac tctccggtgc tcgcccggtg
    11221 gcctttgcct atcccttcgg ggccacggac gagaattccc ggcggctggt cgaggaagcg
    11281 gggttcaatt gcgcctgctc gaccgaggac ggaggggtcg ctccgtccag ttccgtcttc
    11341 tccctgccgc gggtccatgt cggcaattgg actgcagccg gcctcaagcg ggcgctggct
    11401 tcgctgtgaa gaggaaggcg acccgaatct ggtataaatt gtggtcgcgc gcagcgcctc
    11461 gggaaaagac gagcgcggcg ggactggtgg tcagcccgtt cgtgacgacg gcgccgatgc
    11521 gtgccttgct ggactggcgc cccgactgga agaccgaagc agtgggcagg attctcggcc
    11581 accgcgccgg aacgttcgtc gatattggcg ccaacgtcgg ccagtcgctg tccgacttcg
    11641 ttctcgcgcc ggtccggtcg acctatgtcg gattcgagcc gaacctgatt tgctaccagc
    11701 acctggcaaa gctcgtggcg gacaatgctc tgcaccagtg ccacgtcgtt cccgccggcc
    11761 tcggcgaccg caatgggatt gtcgaactgt atcgctacgg cggcgacgtc gatgccggga
    11821 cgacgactgt gcgcgaattg cgtccacggc ttgaggtcgt tgccgacagc ggctgcgtct
    11881 tccggctgga cgatatcggc gaccggatac ccgagcctga gatttcgttg atcaagatcg
    11941 acgttgaagg gagcgagatc gaggtgctcc gcggaatgcg gtcgaccatc gagagaacac
    12001 ggccctggat cctctgcgag gtgctccacc gcgatctctt cgctgagccg gagccctacc
    12061 gccagcgatg tgccgagcta attcggttgg tcgtgggcat gggctacgtt gtgctccacg
    12121 tcgtccagga cgatcagggg gcgtccatca agggactcga gactgtcgac gctttccccg
    12181 attccgtgtg gcacgaagag gatagcctgt tcgcctgtga ttatctgttc gttccggagg
    12241 gggactcggg cgctgc
//
LOCUS       DATAKH010000215         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_13579,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000215 DATAKH010000000
VERSION     DATAKH010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13579"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..415)
                     /locus_tag="VHN55_08940"
     CDS             complement(158..415)
                     /locus_tag="VHN55_08940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804088.1"
                     /translation="MDADQQQARLEEAFERIEETILPCIAMMLETLVDASTNAADADP
                     KALVAELQILAAELEELTLAVERSSPVHVEPGEYKTKIAAA"
     gene            492..635
                     /locus_tag="VHN55_08945"
     CDS             492..635
                     /locus_tag="VHN55_08945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804089.1"
                     /translation="MALAVISAFFLGFAGVRIVTGRSDRAKGALMIAAAAVIFANVLI
                     WSL"
     gene            complement(610..1290)
                     /locus_tag="VHN55_08950"
     CDS             complement(610..1290)
                     /locus_tag="VHN55_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2804090.1"
                     /translation="MPEVIFPGPEGRLEGRFHPGPRPRAPVAMILHSHPQAGGTMNNK
                     IVQLLYQTFVRRGFATLRFNFRGVGKSQGTFDNGIGELSDAASALDWVQQIHPEAETT
                     WVAGVSFGAWIGMQLLMRRPEIRGFISIAPPANMYDFSFLAPCPSSGIIIQGGDDEVV
                     TPGAVQKLVDKLRTQKHITITHDVIPGANHFFANELDLLMKSVDDYLDMRLATDPKRP
                     AITTKSGR"
     gene            1401..>2311
                     /locus_tag="VHN55_08955"
     CDS             1401..>2311
                     /locus_tag="VHN55_08955"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX2804091.1"
                     /translation="MTKRIYLDHAATTPVIAPAREAFARGLAEWANPNSPHWEGRRSR
                     ALLEGAREELRGALGWRHDVVFTSGASESVEIAARCALVPGRAHGATEHAIVGHAMGQ
                     DSVVIPVDSNGLIDEAALDEVLDSGPALVAIQQVNNETGVIQPLDRLATKIREAGSLL
                     LADCAQGASKLPLPDADLIAICAHKLGGPPGIGALLVRDPATLRPCGGGQEKGYRRGT
                     QDVPGAMAFAAALSASPYDMDRLSGLRKRLEDGVRASGGEIIAEDAPRAPTIGAVSLP
                     GATSAALLAQFDLAGMAVSAGSACSSG"
BASE COUNT          387 a          711 c          782 g          431 t
ORIGIN      
        1 tcgcctggat cgaacatggg ctgacggtcg agccgggcgg agctgccgcg cttgctgcgc
       61 tgatcgccgg caaggtggaa ccggtcgagg ggacggtggc ggttctttcg ggaggaaaca
      121 tagacccggc actttatgcc cggatcgtga gcgccgctta ggcagccgca atcttggtct
      181 tgtactcccc gggctcgacg tgaacggggc tcgaccgctc caccgccagg gtcagctcct
      241 cgagctcggc tgcgagaatc tgcagctcgg cgacgagcgc cttgggatcg gcatcggcgg
      301 cgttagtgga ggcgtccacc agcgtttcca gcatcatcgc gatgcacgga aggatcgttt
      361 cctcgatccg ctcgaacgct tcttcgagcc gagcctgctg ttgatcggcg tccacgttcg
      421 caacaatgaa cgggatcggt taagtcttgg tgaaaggaag ccctgttttg gaaacacttg
      481 catcggccgc gatggctctc gccgtcattt cggccttctt cctcggtttc gccggtgtcc
      541 ggatcgtcac cggccgctcc gaccgtgcga agggcgcgtt gatgattgca gcggccgcgg
      601 tgatcttcgc taacgtcctg atttggtcgt tatagccggc cgcttgggat cggtggcgag
      661 gcgcatgtcg agatagtcgt cgacgctctt catcagcagg tcgagctcgt tggcgaagaa
      721 atggttcgca ccggggatta cgtcgtgggt gatggtgatg tgcttctggg tgcgaagctt
      781 gtcgaccagc ttttgcactg cacccggtgt gacgacctcg tcgtccccgc cctggataat
      841 gatcccggac gaagggcagg gcgcaaggaa actgaaatcg tacatgttcg ccggcggtgc
      901 gatcgagatg aagccgcgga tttcaggcct gcgcatcaac agctgcatcc cgatccatgc
      961 gccgaagctt acgccagcaa cccaggtcgt ctcggcttcc gggtggatct gctggaccca
     1021 gtcgagcgcg cttgcagcgt ccgaaagttc gccgattccg ttgtcgaaag tgccctggct
     1081 cttgccgact ccgcggaagt tgaacctcag ggtcgcaaag ccgcgtcgga cgaacgtctg
     1141 gtaaaggagc tggacgatct tgttgttcat cgtcccgccg gcctgcgggt gcgagtggag
     1201 gatcatcgcg accggcgcac gggggcgggg ccctgggtgg aaacggcctt cgagacggcc
     1261 ctcgggacca ggaaagatga cttcgggcat aggtgtgcgg ctgctcgcgt gaggatgact
     1321 gtgcgccgac gggtgcgccg cggcggcggc tcctatatag ggtcgcgact ccaactggca
     1381 atcggcagat atccgccaaa atgactaagc gaatttacct cgaccatgcc gcgaccacgc
     1441 ctgtcatcgc cccggcccgc gaagctttcg cccgcggcct cgctgaatgg gcgaacccga
     1501 acagtccgca ttgggaaggg cgccgttcgc gagcgctcct cgaaggcgcg cgggaagagc
     1561 tgaggggcgc gcttggctgg cgtcatgacg tcgtgttcac ctctggagcg agcgagagcg
     1621 tcgagatcgc ggcgcggtgc gcgctcgtgc caggacgtgc gcacggcgcc accgagcacg
     1681 cgatcgtcgg ccatgcgatg ggccaggatt cggtcgttat tcccgtcgac agcaacggtt
     1741 tgattgacga agccgcgctc gacgaagtgc tcgattccgg acccgccctc gtagcgatcc
     1801 agcaggtgaa caacgaaact ggggtaatcc agcccctcga ccggctggcg acaaagatcc
     1861 gcgaggcagg aagcctgctt ctcgccgact gcgcccaggg cgcgtcgaaa ctgcctctgc
     1921 ccgacgccga cctgatcgcc atctgcgcgc acaagctcgg cggtccgccg ggaatcggtg
     1981 cgctcctcgt tcgcgatccc gccacgctta ggccctgcgg gggcgggcag gagaagggct
     2041 atcggcgggg aacgcaagac gtccccggcg caatggcctt cgccgccgcg ctttcagcga
     2101 gcccttacga catggatcgg ttgtctgggc ttcgcaaacg gctcgaggat ggggtccgtg
     2161 cctcgggcgg cgagatcatc gccgaggacg cgccgagagc gccgacaatc ggtgctgtct
     2221 cgcttcctgg cgcgaccagc gcagccttgc tggcccagtt cgacctcgcc ggaatggcgg
     2281 tttcggcggg aagcgcctgc tcttcgggga a
//
LOCUS       DATAKH010000216        15422 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_33350,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000216 DATAKH010000000
VERSION     DATAKH010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 15422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15422
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33350"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2278
                     /locus_tag="VHN55_08960"
     CDS             <1..2278
                     /locus_tag="VHN55_08960"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804092.1"
                     /translation="IYAQQGNDVINGSQGNDFIDGGSGGSDRLILNTGDTGLFTAATE
                     ARTYTIGANSITDSSGTINTSFTGIERILFLTVGNGDFDDVIDVSGYYSGHDLGMTIQ
                     FGNGDNIVTGSGGNDRVTTGYGSNIIDGGAGYDYSQVLLDATADVTVTISNVGGTLVT
                     DANGAVNQLTNIEEVWVFGIGSGAVTLDASGYEAIPDLFLVLVGHDGTDIMIGSAGND
                     FFANITGQVSGNDVYTGNGGADIYDYTWAADSMNGDTITDFDIDDVIDLRFNNLNPGG
                     SPVLANHFIGAAAFSGTAGEYRYQIDGTVTVVQVDSDGDTIVDQVLTISNGGFELAET
                     APGSNLLTLAAVINPMEGVVADGYVEGATLFIDTNGNHRLDDGEAWTVTGAGGSFSLN
                     VNQAGTIVAIGGVNADTGLANGMTLLAPSDSSVVNPLTTLVQVVVEASAGATSAADAT
                     IQVLAALGLDSGLDLLNVDLLAQGSDPAALEAQKAAAMIANLISAAEGAAGADANTES
                     TLVGALAGLVAEGGATIDLTDSVTILPLLTEALPGGTDLAAIADEVAVESQAIAAATS
                     IGEISEAQLDAALIDYSLDNVIVGDAGANRLHGLGGNDTLSGLGGDDILDGGAGVDFL
                     WGGSGNDIFVAENSSSKVSTKAGPMSVDVIFDFAAGDRIDLRDIDANTMLAGPQAFGV
                     VGARANKAAGDLSYKVYESMTGAEKALGFDIDGVTGASPYSGPVTIVYGNVDGGAADF
                     AVVLVGVNGVSQSDFLFA"
     gene            complement(2287..2359)
                     /locus_tag="VHN55_08965"
     tRNA            complement(2287..2359)
                     /locus_tag="VHN55_08965"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2324..2326),aa:Thr,seq:cgt)
     gene            2529..3782
                     /locus_tag="VHN55_08970"
     CDS             2529..3782
                     /locus_tag="VHN55_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804093.1"
                     /translation="MESYREFPSEFEAPSEAADPQETSIAAIGTDERRMHVRAYNYWV
                     SLLGGRDFPSIEDLEPADLADFAANSVLLDFTSGRENPSTPYVGAAIREECGLSQDVV
                     TTADVPSRSLLSRLTDHYLQIIANRAPVGFEAEFENQRDETICYRGILMPFSSDGDTI
                     DFIYGVMNWKKLGQAVAPIAAPTDPFADARADAEPAEAVEAPAIGPEITDTDPETDID
                     IELDEDSGLADRLWAARESAEAVTAAEGRSREALYRALSRAYDFALACRQEPDEYAEL
                     LEESGVKAQARAPMTPVVKLVFGINCEKARLTEYAAALSYADRQGIGAGGFLGFIEAQ
                     AGGLKALVAAERQARRPDPKPDTKSARARERLRAASPLAPEAIASDQEFALVLTRRTN
                     TGQHEAIALVDDSSLVERAIRRVGG"
     gene            3876..8495
                     /locus_tag="VHN55_08975"
     CDS             3876..8495
                     /locus_tag="VHN55_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010214972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HEX2804094.1"
                     /translation="MTAHPRLPKTLVDSIRDALTSNALPGETQGFDRDQQRKAADFIA
                     SAAAVRAPKSTEIRIESTGGEAGRRRMRLVTINEDMPFLVDSVAGAIAARDLAIYRLL
                     HPIVKVTRDADGRIEKIGEGDPESIIYIELDRADARGRQDLVRHLKRVLSDVRAAVTD
                     WRAMLAEMKSDADSLVKRDRDGAELLRFLADNNFTLLGHAHVGPDGMLHEALGILRNE
                     TALWEQSAAEAAVNHLREEDRTVLILKADRISPVHRRVPLDVVMVRLPDGTLSVHTGL
                     WTSEALRTSAQHVPVLRNLLAKLDKELGFSPSSHAGKALAHVVSTLPHDLLISFDEQE
                     VRTAALTAMSLADRPRPKLLLLPGALRRHLFAFVWLPRDELSTARRKAIGMMLEAEIE
                     SPITSWSVELGEGELALIRFTFQVDPSAELPDTDALDSALVEMVRGWSPAVESELIAA
                     AGAPRATRLALTYIPAFPDGYRARTSPEEAAADIVRLASLASADERGVRLCRSSRGDH
                     ELELKTYRRGDLIPLSEAVPVLENFGFRVLEEIPTSLAGGTIGYIHDFRLELPGVSDV
                     RPILERARIIEEAISCVLCGAAEDDEFNQLVLFAGVDPRAVVWIRAWFRYLRQTGSAF
                     GLLTIADALRRAPKATQALVSLFQAMHDPAESNKDSAVDRRRAEFDDALAGVRSIDDD
                     RILRRMRSLVEAIVRTNAFSPAASEALAFKIDSHLVPGLPAPVPWREIWVYSPRVEGI
                     HLRGGPVARGGLRWSDRRDDFRTEILGLMKAQMVKNSVIVPTGAKGGFYAKMLPPPEQ
                     RDNWLAEGTASYSIFIRALLSITDNIVNDAVVHPDDVVIRDGDDPYFVVAADKGTATF
                     SDLANSIALERGFWLGDAFASGGSNGYDHKAMGITARGAWISVQRHFLEMGTDVQTDP
                     ITVTGVGDMSGDVFGNGMLLSQAIRLIAAFDHRHIFIDPNPNPETSWSERKRLFELPR
                     STWDNYDRSKLSPGGGIFPRTQKSIPLSKQARAALGIDSATVDPATLMNAILKAPVDL
                     LWFGGIGTYVKASTQLDAEVGDPGNDSLRADASELRCRVIGEGANLAVTQPARIEFAA
                     AGGRINTDFIDNSAGVDCSDKEVNIKIPLNREMRDGKLTLTKRNSLLAKMTEDVADMV
                     LEDNRLQTLALSIAESGGARALPGHVRTIELLESSGRLDRKVEGLATTDELLRRGQDN
                     RGLTRPELAVVLSMSKIALQAAAEPLRLSGEELLEPDLFAAFPKAMRAGHAESIRAHR
                     LRDEIIATRVANRIVNRLGPVVALDMTEEEGASLGQVVIAFLVAERLLDLDKLWERME
                     HADLPENVRIELFGIAARSVHSHLSDILRVSGREMSVSALCKLLEPGVRKIAAAATKL
                     IRSEVRNEAAARRDHLIDLGASEEIVRGLVRLYELDGVFGIAALAARKSQDELALTSA
                     YTQLGEALGLDWAQQQLARFTPRDQWERLLTAGLARDFEQLRIDFLSRVRGKDPVAGV
                     EQWVAHHKPRIEQFRELVSRARHEGAVSAPMLAQIASQARILLAR"
     gene            complement(8484..8726)
                     /locus_tag="VHN55_08980"
     CDS             complement(8484..8726)
                     /locus_tag="VHN55_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEX2804095.1"
                     /translation="MAATPPLGPPMKRSVTIAGHETSIALEPLFWRALEAAAAEEKLP
                     LNALIARIDAKRLEQSPPANLASAIRQWLYARASAR"
     gene            complement(8726..9448)
                     /gene="phbB"
                     /locus_tag="VHN55_08985"
     CDS             complement(8726..9448)
                     /gene="phbB"
                     /locus_tag="VHN55_08985"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HEX2804096.1"
                     /translation="MARVAIVTGGTRGIGEAISIALKDMGVTVAANYMGNDERAQAFT
                     DRTGIKSYKWDVADFESCQAGVRQVESELGPVDVLVNNAGITRDATMRKMDHKKWQEV
                     IDTNLGGCFNMAKAVFDGMTGRGYGRIVNIGSINGQAGQYGQVNYAAAKSGIHGFTKA
                     LAQEGARFGVTVNAIAPGYIDTDMVAAVPDDVLQKIVSRIPVGRLGRADEIARGVAFL
                     CDENAGFVTGSTLSINGGQHMY"
     gene            complement(9478..10494)
                     /gene="hemH"
                     /locus_tag="VHN55_08990"
     CDS             complement(9478..10494)
                     /gene="hemH"
                     /locus_tag="VHN55_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEX2804097.1"
                     /translation="MTGASPPADHPKVEYGRVGVLLINLGTPDAPEPGAVRRYLAQFL
                     TDPRVIEIPQWLWRPILHGVVLRTRPSKSAHAYRQVWSAEGSPLAAITRRQAKALQKR
                     VGDEVIVEHAMRYGNPGIEAAIQRLVSTGCDRILAAPLYPQYCAATTASAQDALFAAL
                     ASLRFQPALRTLPPYYDDPLHIDALAKSIDSQLGDLDFEPQRLLLSFHGMPQRTLELG
                     DPYHCHCQKTARLLGERFRVPTDIAFQSRFGRAKWLEPATDTVLAAYPAKGITQIAIA
                     APGFSADCVETLEELGIRGRDSFLAAGGRRFARLDCLNDSPEGMTMLEALVRRELAGW
                     LPNE"
     gene            complement(10491..12146)
                     /locus_tag="VHN55_08995"
     CDS             complement(10491..12146)
                     /locus_tag="VHN55_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010185008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX2804098.1"
                     /translation="MASDLDRKFDETLAAITGPGGRIIIDRDKQGRAIVGNFPATLPL
                     LFRTFCALNAQTEALVSGEERLTFADLDRWSDSLARAIAWRGVAKGDRVAIAMRNCPS
                     WVVTYMAVLKAGAVATLLNGWWQSHELRHAIEMTRPTLIIADLPRAARIEAVNRDVPV
                     IVVESEQVLETALKPLLEGDEAELPEIVAEDDATILFTSGSTGEAKGALSTHRAVTTG
                     VYAYATGLMTLLSIMENERRPPKNPPRTLITVPLFHVTGEVPVLLNSFVIGRGMVMMP
                     KWDAGEALRLIEKEKVTYFVGVPTMSLELMTHPDRDKNDLSSLTDIAAGGAPRPVSHV
                     ERLQKAFGWAQPALGYGLTETNAVGCSNFWTNYAEKPGSTGRAQKPLVDIAILGEDGR
                     HLAAGERGEIGIRSAANFKCYWEDPESTGAAFTGDGFVRTGDIGYLDEDGYLFIVDRK
                     KDIIIRGGENISAAEVEAACYACPDVAEAAVFGAPDERLGEVPVAVIYARGELDENRL
                     RKFLEANIAAFKVPARFIFSEQPLPRLGTGKIDRVALKALYAR"
     gene            12219..13100
                     /gene="lgt"
                     /locus_tag="VHN55_09000"
     CDS             12219..13100
                     /gene="lgt"
                     /locus_tag="VHN55_09000"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009820541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEX2804099.1"
                     /translation="MPTAESTTNAIAWTDLHLSPVALDLGFFELRWYSLAYLAGIFVG
                     YWYMLRLLRQPGAPMARRHADDLVFYAALGVILGGRLGYVLFYNLPYYAQHPVEALKL
                     WDGGMSFHGGLVGTVLAIFYLAWKQKLPALRIHDYVACVAPIGLFFGRLANFVNHELW
                     GAPTDVPWAIRFPETIAGQLVLGPPRHPSQLYEAVLEGALLFAILMWMFWKTEARYQP
                     GKLVGAFGFFYGLFRFLVEFVREPDPQLIPFTEATGLHMGQWLSLPLIIGGAWLMWTA
                     KGRRVRVDPTLGSASVS"
     gene            13166..14074
                     /locus_tag="VHN55_09005"
     CDS             13166..14074
                     /locus_tag="VHN55_09005"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX2804100.1"
                     /translation="MDACNAYYYATRDPLGERGDFTTAPEISQMFGELAGACLADCWA
                     RAGKPTNAAYAELGPGRGTLAADALRVMRSAGLQPPVHFVETSPVLREAQEKSVPGAS
                     WHEAISELPDAPLLVVANEFLDALPVRQFIGEVERKVLVAAGGLAFDRDGEIRETSPV
                     RDAVVAELASRLVTNGGVALIIDYGHANTAPGDTLQAVRGHAFAPVLASPGEQDLTAH
                     VDFEAVANAAREAGAAATAHATQGQWLKRLGIEARSKSLAQAHPERADEIAFARDRLS
                     DPAAMGDLFKVIAIHSPQWPAPAGFE"
     gene            14071..14835
                     /gene="pgeF"
                     /locus_tag="VHN55_09010"
     CDS             14071..14835
                     /gene="pgeF"
                     /locus_tag="VHN55_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEX2804101.1"
                     /translation="MSVEVIRSEPLRGVPHGFLGRRGGVSTGVVAGLNVGTGSKDDPG
                     AIAENRRLAVDAVLPGAQLATVHQIHSAEARYVAEPWPHQERPQADAMVTDQPGLLLG
                     ILTADCAPVLLADREAGIVGAAHAGWRGALEGVTDSTIAAMEEIGAVRGRIIAAIGPC
                     IAMPSYEVDEAFRDRFLDADPANDRFFVRAASNALHFDLPAYVRDRLSAAGIAEAEMI
                     HLDTYSDPGRFFSYRRATHRGEPDYGRQISLIGLPA"
     gene            14940..15095
                     /locus_tag="VHN55_09015"
     CDS             14940..15095
                     /locus_tag="VHN55_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003052809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX2804102.1"
                     /translation="MNRNGKLLRDNAGATSIEYAAVASLISVVAISAFASVGNSVLAL
                     FATVPSF"
     gene            15166..>15422
                     /locus_tag="VHN55_09020"
     CDS             15166..>15422
                     /locus_tag="VHN55_09020"
                     /EC_number="4.4.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123058.1"
                     /note="catalyzes the formation of methanethiol and
                     2-ocobutanoate from L-methionine; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine gamma-lyase"
                     /protein_id="HEX2804103.1"
                     /translation="MDENEAKPGGPSQKRPPRASPTHIGNHRLNPSTLMMGYGFDPEL
                     SEGSLKPPIFLTSTFVFENAAAGKRFFEGVTGKRPGGAEGL"
BASE COUNT         2690 a         5140 c         4915 g         2677 t
ORIGIN      
        1 aatctacgca caacaaggca acgacgtcat caacggcagc cagggcaatg atttcatcga
       61 cggcggcagc gggggaagcg accggctcat cttgaacacg ggcgatacag gcctgttcac
      121 cgctgcgact gaagcccgca cctacaccat cggcgccaat tccatcaccg actcttcggg
      181 cacgatcaac accagcttca ccggcatcga acgcattctc ttcttgactg tcgggaatgg
      241 cgacttcgac gacgtgatcg acgtcagcgg ctattattca ggccatgacc tcgggatgac
      301 catccagttc ggcaacggcg acaatattgt gacgggcagc ggcggcaacg accgcgtgac
      361 caccggttac ggaagcaaca tcatcgatgg cggagcggga tacgattatt cccaggtcct
      421 gctcgatgcg acggctgatg tcacagtgac gatcagcaat gtcggcggga cgctggtcac
      481 cgacgcgaac ggcgcggtca accagctcac caacattgag gaagtctggg ttttcggcat
      541 tggcagcggc gcggtcaccc tcgacgcgtc gggctacgag gcgatccccg accttttcct
      601 cgtccttgtc ggccatgacg ggacggacat catgatcggc tcggcaggca atgacttttt
      661 cgccaacatc accgggcagg tgtccgggaa cgatgtctac accggtaacg gcggggccga
      721 catctacgat tacacctggg ccgccgacag catgaatgga gacacgatca ccgacttcga
      781 catcgacgac gtgattgacc tgcggttcaa caatcttaac ccgggcggca gcccggttct
      841 ggccaaccac ttcatcggcg cagcggcgtt cagcggcacc gccggcgaat atcgttatca
      901 gatcgacggt accgttacgg tcgtccaggt cgacagcgac ggggatacga tcgtcgacca
      961 ggtgctgacc atttcgaacg gcggcttcga gctcgccgaa accgcgcccg gttccaacct
     1021 cctgaccctg gcggccgtga tcaacccgat ggagggcgtg gtcgccgacg gctatgtcga
     1081 aggcgcgacc ctgttcatcg acaccaacgg caaccatcgg ctcgacgacg gcgaagcctg
     1141 gaccgtcacc ggcgctggcg gcagcttctc gcttaacgtc aaccaggcgg gcacgatcgt
     1201 cgcaatcggc ggcgtcaacg ccgacactgg cctggccaat gggatgaccc tgctggcgcc
     1261 gtcggactcc agcgtcgtca acccgctgac gaccctcgtt caagtggtgg tcgaggcgag
     1321 cgcaggagcg acctccgccg cagatgcgac catccaggtg ctcgccgcgc ttggtctcga
     1381 ttccggcctc gacctgctca atgtcgacct gctcgcccag ggcagcgacc cggcggcgct
     1441 cgaagcccaa aaggcggcgg cgatgattgc caacctcatt tccgcagcag agggcgcggc
     1501 cggcgccgac gccaacaccg aatcgacgct ggttggcgcg cttgccggcc tggtcgccga
     1561 gggtggcgcg acgatcgacc tgaccgactc ggtgacgatc ctgccgcttc tgaccgaagc
     1621 gctgcccggc ggcaccgatc ttgcggcaat cgccgacgag gtcgcggtcg aaagccaggc
     1681 gattgcggcg gcgacgtcga tcggcgagat cagcgaggcc cagctcgacg ccgcgttgat
     1741 cgattattcg ctcgacaatg tcatcgtcgg cgatgccggc gccaaccgcc ttcacggtct
     1801 gggcggcaac gacacgcttt cgggactcgg cggcgacgac attctggacg gcggagcggg
     1861 agtcgatttc ctctggggcg gtagcggcaa cgacattttc gtggccgaga attcatcttc
     1921 caaggtctcg accaaggcag gcccgatgtc ggtggacgta attttcgact tcgccgccgg
     1981 agacaggatc gatctccgcg atatcgatgc caatacaatg ctcgccggcc ctcaggcgtt
     2041 cggcgtcgtg ggcgcccgag ccaacaaggc agctggcgac ctgtcgtaca aggtctacga
     2101 aagcatgacc ggcgcggaga aagcactcgg cttcgacatc gacggggtga ccggcgcaag
     2161 cccatattca ggcccggtca cgatcgtcta cggcaacgtt gatggcggtg cggcagactt
     2221 cgcggtcgtc ctcgtaggtg tcaacggcgt gtcgcagtcg gacttcctgt tcgcctgacc
     2281 gcgcggtgcc gcttgaggga ctcgaaccca cgaccccatc attacgaatg atgtgctcta
     2341 ccagctgagc taaagcggca tttcgcgaaa tcagcgggag taaacccgcg cggcggcgcc
     2401 gcccctaaca gtcgccactg ccgtgggcaa gcgcaagtct ttccctccaa ttcaacggtt
     2461 acagttaacg gtttcgcaac ggctctaggc catccctgtc tcacagatgg agcagtgggg
     2521 gctcttcaat ggagagttat cgcgagtttc ctagcgagtt cgaggcgcct tccgaagccg
     2581 ccgacccgca ggaaacgagt atcgcggcga tcggaaccga cgagcggcgg atgcatgtcc
     2641 gcgcctacaa ttactgggtt tccctgctcg gcggccgcga ttttccgtcg atcgaggatc
     2701 tcgagcctgc cgacctcgcc gacttcgctg cgaacagcgt gcttctcgac ttcacgagcg
     2761 gccgcgaaaa cccgtcgacg ccctacgtcg gagcggcaat tcgtgaggaa tgcggacttt
     2821 cgcaggatgt cgtcacgacc gccgacgttc cgagccgctc gctcctgtcg cggctgaccg
     2881 accattatct tcagatcatc gccaaccggg cgccggtcgg cttcgaggcg gaattcgaaa
     2941 accagcgcga cgagacgatt tgctatcgcg gcatcctgat gcccttctcg tcggacggag
     3001 acacgatcga cttcatttac ggggtgatga actggaagaa gcttggccag gcggtggcgc
     3061 cgattgccgc gccgaccgat ccatttgccg atgcccgtgc ggatgcggag ccggccgaag
     3121 ccgtcgaagc gcctgcgatt gggcccgaaa tcaccgatac ggaccccgaa accgacatcg
     3181 acatcgagct cgacgaggat tcggggcttg ccgaccgcct ctgggcggcc cgggaaagcg
     3241 ccgaggcggt caccgctgcc gaggggcgaa gccgggaggc gctctatcgc gccctttcgc
     3301 gagcctacga cttcgccttg gcctgcaggc aggagccgga cgaatatgcc gagctgctcg
     3361 aggagtcggg ggtaaaggca caggcgcggg cgccgatgac gccggtcgtg aagctcgtgt
     3421 tcgggatcaa ttgcgagaaa gctcgtctca ccgaatatgc cgccgccttg tcctatgccg
     3481 acaggcaggg gatcggcgcc ggcgggttcc tcggcttcat cgaggcgcag gcaggcgggc
     3541 tcaaggcgct agtcgcagcg gagcgccagg cacgaaggcc ggatcccaag cccgatacca
     3601 agagcgcaag ggcgcgggag cgcctccggg ccgcgtcacc gctcgctccc gaggcaatcg
     3661 caagcgacca ggaattcgca ctcgtgctga cccgccgcac gaacaccggc caacacgagg
     3721 cgattgccct cgtcgacgat tcgtcgctcg tcgagcgcgc gatccgccga gtcggcggct
     3781 aggctcaaaa aactctccgc ttcgtccctt gtcgccactg cagcgtgacg gctataggcc
     3841 gccgccaaga cgccagtgtc ggagcaattg cctaaatgac ggcccacccg cgcctgccga
     3901 aaacgctggt tgattccatt cgcgatgcgc tgacgagcaa tgcgcttccg ggcgaaacgc
     3961 agggattcga ccgcgatcaa caacgcaagg cggcggactt catcgcctcc gcggcggcgg
     4021 tccgcgcgcc gaaatcgacc gaaatcagga tcgaatcgac cggcggcgag gccggacggc
     4081 ggcgaatgcg actggtcacg atcaacgaag acatgccctt cctcgtcgac agcgttgccg
     4141 gagcgattgc cgctcgagac ctggcgatct accggctgct tcacccgatc gtgaaagtca
     4201 ctcgcgacgc ggacggccgg atcgagaaga tcggcgaggg cgatccggag tcgatcatct
     4261 acatcgagct cgatcgcgcc gacgcccggg gccgacagga cctggttcgc cacctgaagc
     4321 gcgttctttc cgacgtccgc gcggcggtga ccgactggcg ggcgatgctc gccgagatga
     4381 agtccgacgc cgacagcctc gtgaagcgcg acagggacgg cgcggagctg cttcgattcc
     4441 tagccgacaa caatttcacg ctgctgggtc atgcccatgt cggtccggac gggatgctcc
     4501 acgaggcgct cgggatcctg cgcaacgaga ctgccctgtg ggagcaaagc gcagccgaag
     4561 ccgcggtgaa tcatctccgc gaggaagacc gcaccgtcct catcctgaag gccgaccgca
     4621 tttccccggt gcatcggcgt gtgccgctgg acgtggtgat ggtccggctt ccggatggga
     4681 ccctgtcggt ccacaccggc ctgtggacga gcgaggcgct gcggacgtcg gcgcagcatg
     4741 tgccggtcct tcgcaaccta ttggcaaagc tcgacaagga actcggcttc tcgccgtcga
     4801 gccatgccgg aaaggcgctc gcccacgtcg tttcgacgct tccgcacgac ctgttgatct
     4861 ctttcgacga acaagaggtt cgaacggcgg cgctgacggc gatgagcctt gctgacaggc
     4921 cccggccgaa gctcctgctg cttcccggcg cccttcggcg gcaccttttc gccttcgtct
     4981 ggctgccccg cgacgagctg agcacggcgc ggcgcaaggc gatcgggatg atgctcgagg
     5041 cggagatcga atcgccgatc accagctggt cggtcgagct cggcgagggc gagctcgcgc
     5101 tgatccgttt caccttccag gtcgacccgt cggccgagct tcccgacacc gacgccctcg
     5161 actccgcgct cgtcgagatg gtccggggct ggagccctgc ggtcgagtcg gagctgattg
     5221 cggcggccgg tgcgcctcgg gcgactcgcc tcgcgctcac ctacatcccc gcgtttcccg
     5281 acggctatcg cgcccggacg agccccgaag aggccgccgc tgacatcgtt cggctggcga
     5341 gccttgcaag cgctgacgag cgcggcgttc gcctctgccg ttcgtcgcgg ggggaccatg
     5401 agctcgagct caagacctac cggcgcggcg acctgatacc gctgtcggaa gctgtcccgg
     5461 tgctggagaa tttcggcttt cgcgtacttg aggaaatccc gacctctctg gccggcggca
     5521 cgataggcta cattcacgac ttccgcctcg agcttccggg cgtcagcgat gtgcggccga
     5581 tcctcgagcg cgccaggatt atcgaggagg cgatttcgtg cgtcctgtgc ggcgcagccg
     5641 aagacgacga gttcaaccag ctggtcctgt tcgcgggagt cgatcccagg gcggtcgtgt
     5701 ggatccgcgc ctggttccgt taccttcgcc aaaccggaag cgccttcggc ctcctgacca
     5761 tcgccgatgc gcttcgccgg gcgccaaagg cgacccaagc cctggtgtct ctgttccagg
     5821 cgatgcacga cccggccgaa tcgaacaagg attcggccgt cgaccgccgc cgtgccgaat
     5881 tcgacgacgc cctggccggt gtccgctcga tcgacgacga ccggatcctc aggcggatgc
     5941 gctcgctggt cgaggcgatc gttcgcacca acgccttctc tccggcggcc agcgaggcac
     6001 tggccttcaa gatcgattct cacctggtcc cgggccttcc cgcgccggtt ccgtggcggg
     6061 aaatctgggt ctattcgccg cgcgttgaag gcatccacct gcgcggcggc ccggtcgccc
     6121 gcggcggact gcgctggtcg gaccggcgcg acgacttccg aacggaaatt ctgggcctga
     6181 tgaaggcgca aatggtcaag aattcggtca ttgtgccgac cggcgcgaag ggcggctttt
     6241 acgcgaaaat gctcccgccg ccggagcagc gcgacaattg gctcgccgag ggaacggcca
     6301 gctacagcat ctttattcgg gcgctgctgt cgatcaccga caatatcgtc aatgacgcgg
     6361 tcgtccatcc cgacgacgtt gttatccgcg acggcgacga cccctatttc gtcgtcgctg
     6421 ccgacaaggg caccgcgaca ttttccgatc tggctaattc gattgcgctc gagcgcggat
     6481 tctggctcgg cgatgccttc gccagcggcg gctccaacgg ctacgatcac aaggcgatgg
     6541 ggatcaccgc gcggggcgcg tggatctccg tgcagcggca cttcctggag atgggcacag
     6601 acgtccagac cgatcccatt accgtcaccg gcgtcggcga catgtcgggc gacgtgttcg
     6661 gcaacggcat gcttctcagc caagcgatta ggttgatcgc ggcgttcgat cacaggcata
     6721 tcttcatcga cccgaaccct aacccggaga cgagttggag cgagcgcaag cggctattcg
     6781 agctgccgcg gtcgacctgg gacaattacg atcggtcgaa gctctcgccc ggcggcggaa
     6841 tcttcccccg cacccagaag tcgatcccgc tgtcgaagca ggcgcgggct gcgctcggaa
     6901 tcgattccgc caccgtcgac cccgccacct tgatgaacgc gatcctcaag gcgcccgtcg
     6961 atctgctctg gttcggagga atcggcactt acgtgaaggc ctcgacccag ctcgatgccg
     7021 aggtcggcga tcccggcaac gactcactcc gcgccgacgc tagcgagctt cgctgccggg
     7081 tgatcgggga aggcgccaac cttgcggtta cgcagccggc gcggattgaa ttcgcggcgg
     7141 ccggcggccg aatcaatacc gacttcatcg acaacagcgc cggcgtcgat tgctcggaca
     7201 aggaagtgaa catcaagatc ccgctcaatc gcgagatgcg ggacggcaag ctgacgctga
     7261 cgaaacgcaa ctcccttctc gcgaagatga ccgaggacgt tgccgacatg gtgctcgagg
     7321 acaatcgcct ccagacgctg gcgctgtcga tcgccgaaag cgggggcgct cgggcgcttc
     7381 ccggccacgt ccgtaccatc gaactgctcg aatcctccgg ccggctcgat cgcaaggtcg
     7441 agggacttgc aaccaccgac gagctcctcc gccgcgggca ggacaaccgc ggcctcaccc
     7501 gccccgaact ggcggtcgtc ctgtcgatgt cgaaaatcgc gctccaggcc gccgccgagc
     7561 cgctgcggct atcgggcgag gagctgctcg aaccggacct cttcgcggcc ttcccgaagg
     7621 cgatgcgggc gggccatgca gagtcgatcc gagcgcaccg gctccgcgac gagatcattg
     7681 ccacccgggt cgccaaccgg atcgtcaatc gcctgggccc ggtcgtggcg ctcgacatga
     7741 ccgaggagga aggcgcgtcg ctcggacagg tggtgatcgc cttcctggtc gccgagcgcc
     7801 tcctcgacct cgacaagctg tgggagcgga tggaacatgc cgaccttccg gagaatgtcc
     7861 ggatcgagtt gttcgggatt gccgctcgga gcgtgcattc gcacctgtcc gacatcctgc
     7921 gggtcagcgg ccgcgagatg agcgtcagcg cgctctgcaa gctgctcgag cctggagttc
     7981 gcaagatcgc ggccgcggcg acgaagctga tccgctcgga agtgcggaac gaggccgccg
     8041 cccggcgcga ccacctgatc gaccttggcg ccagcgagga aatcgttcgt gggcttgtcc
     8101 ggctctacga gctcgacggc gtgttcggga tcgccgcgct cgctgcgcgc aaaagccagg
     8161 acgagctggc gctgaccagc gcctatacgc aactcggcga ggcgctcggc ctcgactggg
     8221 cgcagcagca gctcgcccgc ttcactcccc gcgatcaatg ggaacggttg ctaaccgccg
     8281 gcctcgcccg cgacttcgag cagcttcgga tcgatttcct gtcgcgggtg cggggcaaag
     8341 acccggtcgc cggagtcgag cagtgggtgg cccaccacaa gccccggatc gagcaattcc
     8401 gcgagctggt cagccgcgca cgccacgagg gcgcggtcag tgctccgatg ctcgcccaga
     8461 tcgcgagcca ggcgcgaatc cttctagcgc gctgaggccc tggcgtagag ccactgacgg
     8521 atcgcagaag cgagattggc cggcggcgac tgctccagcc gcttcgcgtc gattcgagcg
     8581 atcagcgcgt tgagcggcag cttctcctcc gcagccgcag cttccaaggc tctccagaac
     8641 agcggctcga gcgcaatcga cgtttcgtgg ccggcaatgg tcaccgaccg cttcatcggc
     8701 ggcccgagag gtggcgtggc cgccatcagt acatgtgctg gccgccgttg atcgacagcg
     8761 tcgaaccggt gacgaagccg gcattctcgt cgcacaggaa ggctactccg cgagcgatct
     8821 cgtcggctcg gccgagccgt ccgaccggga ttcgggaaac gatcttctgg agcacgtcgt
     8881 cgggaacggc cgccaccatg tcggtgtcga tatagcccgg agcgatggca ttgaccgtca
     8941 ccccgaaccg ggcgccttcc tgcgccagcg ccttggtgaa gccatggatc cccgacttgg
     9001 cggcggcata gtttacctgc ccatactggc ccgcctggcc gttgatcgag ccgatgttga
     9061 cgatccggcc gtaaccgcgg ccagtcatgc cgtcgaacac cgccttggcc atgttgaagc
     9121 aaccccccaa gttggtgtcg atcacttcct gccacttctt gtggtccatc ttgcgcatgg
     9181 tcgcgtcgcg ggtgatcccg gcattgttga ccaggacgtc gactggcccg agctcggatt
     9241 cgacctggcg cacgcccgcc tggcacgatt cgaaatccgc gacgtcccac ttgtacgact
     9301 tgattccggt gcggtccgta aacgcctggg cgcgctcgtc attgcccatg taattggcgg
     9361 caacagtcac acccatgtcc ttgagcgcga tgctgattgc ctcgccgata ccgcgcgttc
     9421 cgccagtgac gatcgcgacc cgagccattt gcttcctcct gttgtttttt caagcgctta
     9481 ttcgtttggc agccaccctg caagctcacg ccggaccagc gcctccagca tggtcatgcc
     9541 ctcgggcgaa tcgttaaggc agtcgaggcg ggcgaaccgc cggcctccgg cggcgaggaa
     9601 gctatcgcgg ccgcgaattc cgagttcttc gagcgtctcg acgcaatccg cagagaagcc
     9661 gggggccgcg atggcgattt gcgtgattcc tttggccggg taggcggcga gcacagtgtc
     9721 ggttgccggc tcgagccact tggcgcggcc gaacctggat tggaacgcga tgtcggtcgg
     9781 gactcgaaac ctttcgccga gcagcctcgc cgtcttttgg cagtggcagt ggtaggggtc
     9841 cccaagctca agcgtccgtt gcggcatgcc gtggaagctc aacagcaggc gctgcggctc
     9901 gaaatccaga tcgccaagct ggctgtcgat gcttttcgcc agcgcgtcga tatgtagcgg
     9961 gtcgtcgtaa taaggcggga gcgttcgaag cgcgggctga aaccgaagcg acgcgagggc
    10021 ggcgaacagc gcgtcctggg cgctcgccgt cgtcgccgcg caatattgcg ggtaaagcgg
    10081 cgccgcgagg atccggtcgc agcccgtgct gaccagccgc tggatggcgg cttcgatccc
    10141 gggattgccg tagcgcatcg catgttcgac gatgacttcg tcgccgacac gcttctggag
    10201 cgccttcgcc tggcggcggg tgattgccgc cagcggcgac ccctccgcgc tccacacctg
    10261 cctgtacgca tgcgccgact tgctcgggcg agtgcgaagc accacgccgt gaaggatcgg
    10321 ccgccatagc cattgcggaa tctcgatcac ccgcgggtcg gtcaggaact gggcgaggta
    10381 ccgccgaacc gcccccggct ccggcgcgtc gggagtgccg aggttgatca gtagcacccc
    10441 gacgcggccg tactcgacct tggggtgatc ggccggtggc gaagcgccgg tcaacgcgcg
    10501 tacagcgcct tcagcgcgac gcggtcgatt ttccccgtcc cgagtctcgg caacggctgc
    10561 tccgaaaaga tgaatcgtgc aggcactttg aaggcggcga tgttcgcttc gaggaatttg
    10621 cgcagcctgt tctcgtccag ctcgccgcgg gcatagatca ccgcaaccgg cacctcgccg
    10681 agccgctcgt ctggcgcgcc gaagaccgcg gcctcggcga catccggaca ggcgtagcag
    10741 gccgcctcga cctccgccgc cgagatgttc tcgccgccgc ggataatgat gtccttcttg
    10801 cggtcgacga tgaacagata gccgtcctcg tcgagatagc cgatgtcccc ggttcgaacg
    10861 aagccgtcgc cggtgaaggc ggcgccggtg gattccggat cctcccaata gcatttgaaa
    10921 ttggcagccg agcgaatccc gatctcgccg cgctcgccgg cagccaggtg ccggccgtcc
    10981 tcgccgagaa tggcgatgtc caccagcggc ttctgcgcac gcccggtcga tcccggcttt
    11041 tcggcatagt tcgtccagaa attgctgcag ccaacggcat tcgtttcggt gagtccgtag
    11101 ccgagcgccg gctgcgccca gccgaacgcc ttttgcaacc gctcgacgtg gctgaccggc
    11161 cggggcgcac cgcctgcggc gatgtcggtc agcgacgaaa gatcgttctt gtcccggtcg
    11221 gggtgagtca tcagctcgag gctcatcgtc gggacgccga cgaaataggt gaccttctcc
    11281 ttttcgatca gccgaagcgc ctcgcccgcg tcccatttgg gcatcatcac cattccccgg
    11341 ccgatgacga agctgttgag aagcacggga acctcgccgg tgacgtggaa gagcggaacc
    11401 gtgatcaggg tgcgcggcgg attcttcggc gggcgcctct cgttctccat gatcgagagc
    11461 aaggtcatca gtcccgtggc ataggcataa acgcctgtcg tcaccgcccg gtgcgtggac
    11521 agggcgccct ttgcctcccc ggtcgacccc gacgtgaata ggatcgtcgc atcgtcctcg
    11581 gctacgatct ccggaagttc ggcctcatcg ccctcgagca gcggcttgag cgcggtttcc
    11641 agcacctgct cggattcgac gacaatcacc ggcacatccc ggttgacggc ttcgatccgc
    11701 gccgccctgg gcaagtcggc gatgatcagc gttggccgcg tcatttcgat cgcatgccga
    11761 agctcgtggc tttgccacca gccgttgaga agggtcgcaa cggcgcccgc cttcagcacg
    11821 gccatgtagg tcacgaccca cgaagggcag ttccgcatcg cgatcgccac tcgatcgccc
    11881 ttggcgaccc cgcgccaggc gatcgccctg gcaagcgaat ccgaccagcg gtcgagatcg
    11941 gcgaaggtca gcctttcctc gcccgaaaca agtgcctcgg tctgcgcatt gagtgcgcaa
    12001 aaggtgcgga acaggagagg cagggtcgcc gggaaattgc cgacgatcgc ccgcccctgc
    12061 ttatcgcggt ctatgatgat ccggccgccg gggccggtga tcgcggccag cgtctcgtcg
    12121 aacttccgat cgagatcgct tgccatggaa tcgttgctcc cgtccgtttg cctttgacgt
    12181 taggcacctt atgaggccgg gaccgaaaag gaagagtctt gccgaccgca gaatcgacga
    12241 cgaacgcaat cgcctggacc gacctgcacc tgtcgccggt cgcgctcgac ctcgggtttt
    12301 tcgagctccg ctggtacagc ctcgcctacc tggccggaat cttcgtcggc tattggtaca
    12361 tgctcaggct gctcaggcag cccggcgcac cgatggctcg ccgccacgcc gacgacctcg
    12421 tcttctatgc cgcgctcgga gtgatcctcg gcggccgcct cggctacgtg cttttctaca
    12481 atttgcccta ttacgcccaa cacccggtgg aagcgctcaa gctttgggac ggcggaatgt
    12541 cgttccacgg cggcctggtc ggcaccgtgc tcgccatttt ctacctggcc tggaagcaga
    12601 aactgccggc gctgaggatc cacgattatg tcgcctgtgt cgctccgatc gggctgtttt
    12661 tcggccgcct ggcgaatttc gtgaaccacg aattgtgggg agccccgacg gacgtgccct
    12721 gggcaatccg attcccagag acgatcgcgg gccaattggt gctggggccg ccgcgacacc
    12781 ccagccagct atacgaggca gtccttgagg gcgcactgct gttcgcgatc ctgatgtgga
    12841 tgttctggaa aaccgaagcc aggtaccagc ccggcaagct cgtcggagcg ttcggtttct
    12901 tttacggcct gttccgtttc ctcgtcgaat tcgtgcgcga gcccgacccg cagcttatcc
    12961 ccttcacgga ggctaccggg ctccacatgg gccagtggct gtcgctcccg ctgatcatcg
    13021 gcggcgcgtg gctgatgtgg accgccaagg gccggcgggt ccgggtcgac ccaacgctcg
    13081 ggtccgccag cgtctcatga ccccgctgga gcgcgcgctc cgggaccgaa tccgctccga
    13141 cggtcccctt tcggtcgaag cctatatgga cgcgtgcaac gcttattatt acgcgacccg
    13201 cgacccactc ggtgagcgcg gcgatttcac caccgcgccg gagatcagcc agatgttcgg
    13261 cgagcttgcc ggagcgtgcc tcgccgactg ctgggcgcgg gccggaaagc cgacgaacgc
    13321 cgcttatgcc gagcttggtc ccggccgcgg aacgctcgcc gcggacgcgc tgcgggtaat
    13381 gcgctcggcc ggtctgcagc cgccggtcca tttcgtcgag accagcccgg tgcttcgcga
    13441 ggcgcaggaa aaatccgtgc ccggggcgag ctggcacgag gcgatttccg agcttccgga
    13501 cgcccctctt ctcgtcgtcg ccaacgaatt cctcgacgct ctcccggttc gccagttcat
    13561 cggcgaagtc gagcgcaagg tgttggtcgc cgcaggggga ttggcgttcg accgcgacgg
    13621 tgagatcagg gaaacttcgc ccgtccggga tgccgtcgtt gccgaactgg caagccgcct
    13681 ggtcaccaat ggcggagtgg cgctgatcat cgattatggt cacgcaaaca cggcgcccgg
    13741 ggacactctg caggccgtgc gaggccacgc cttcgctccg gtgctcgcca gccccggcga
    13801 acaggacctg accgcccatg tcgatttcga ggccgtcgct aacgccgcgc gcgaagccgg
    13861 agcggcggca actgcgcacg caacgcaggg acaatggctg aaacgactcg gaatcgaagc
    13921 gcgatcgaag tcactcgcgc aggcccaccc cgagcgggcc gacgaaatcg cgttcgctcg
    13981 ggatcgcctc tccgatccgg ccgcgatggg cgacctgttc aaggtgattg caatccattc
    14041 gccgcaatgg ccggcgccgg cgggctttga atgagcgtcg aagtcattcg ctccgagcct
    14101 ctcaggggcg tgcctcacgg cttcctcggc cgccgcggcg gagtttcgac cggagtcgtc
    14161 gcggggctca acgtcggtac cggcagcaag gatgatcccg gagcgatcgc cgagaaccgc
    14221 cggcttgcag tcgatgccgt gctcccgggc gcccagcttg ccaccgtcca ccaaattcat
    14281 tctgccgaag cgcgctacgt cgccgaacca tggccgcacc aggagcggcc ccaggcagac
    14341 gcaatggtca ccgaccagcc cgggttgctc cttgggatcc tgaccgccga ctgcgcacct
    14401 gtcctgctcg ccgaccgcga ggcgggaatc gtcggtgccg cccacgccgg ctggcgcggc
    14461 gcgctcgagg gcgtcacgga ctcgacgatt gccgcgatgg aagagatcgg cgcggtacgg
    14521 ggccgcatca tcgctgcaat cggcccgtgc atcgcgatgc cgagctatga agtggacgag
    14581 gcgttccggg accgtttcct cgatgccgac cccgccaacg atcgcttctt cgtcagggcc
    14641 gcgtcgaacg cgcttcactt cgacttgcca gcctatgtcc gcgaccgcct ttccgccgcc
    14701 ggcatagccg aggccgagat gatccacctc gacacctatt cggaccccgg ccgcttcttc
    14761 agctaccgcc gcgcaaccca tcgcggcgag cccgattacg gtcggcaaat ctcgttgatc
    14821 ggactgccgg cgtagccgct tcgggcactg tgccagaccg gaacagccga aactgcggcg
    14881 tggaggagcc atccgagcgg gcgtagtggc cgcggcaaga catggtttgg ggaacgatca
    14941 tgaaccgcaa cggaaagctt cttcgcgaca atgccggcgc gaccagcatc gaatatgccg
    15001 cagtcgcgtc gctgatttcg gttgtcgcaa tcagcgcatt cgcgagcgta ggaaacagcg
    15061 tcctcgccct cttcgcaacg gttccgagct tctaaaggac cacattcgcg ggcttccaaa
    15121 agtgacggct ggatgactcg gcccgtcatc ggctaggagc cggcgatgga cgaaaacgaa
    15181 gcgaagcccg gcggcccctc ccagaagcgg ccgccgcggg cgtccccgac gcatatcggg
    15241 aatcaccggc tcaacccctc gaccctgatg atgggctacg gcttcgatcc ggagctcagc
    15301 gaaggctcgc tcaagccgcc gatcttcctc acctcgacct tcgtgttcga gaatgcagcg
    15361 gccggaaagc gcttcttcga gggcgtcacc ggcaagcgtc ccggcggcgc cgaggggctc
    15421 at
//
LOCUS       DATAKH010000217         2123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_13623,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000217 DATAKH010000000
VERSION     DATAKH010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13623"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1166
                     /gene="lpdA"
                     /locus_tag="VHN55_09025"
     CDS             <1..1166
                     /gene="lpdA"
                     /locus_tag="VHN55_09025"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX2804104.1"
                     /translation="VVKRSRDVAGELNRGGTGLMKKNKIAVHMGEGQLTGKGKVTVAA
                     DGKTTELQCKHLIVATGARARELPFAKSDGKRIWTYRHAMTPPEMPSELLVIGSGAIG
                     IEFASFYSDLGAKVTVVEMLDRVVPVEDSEISDFLAKQLKKQGMTIHTGAGVESLKSD
                     AKGVTATIKTADGKSSEHKFSHAIVAVGIVPNTEDIGLDQLGVKMTKGHIDTDDHCRT
                     STAGIWAIGDVTAPPWLAHKASHEGVTAAEAIAKELGKDAHPHATDPKNIPGCTYCRP
                     QVASVGLTEAAAKEKGYEVKVGKFPFIGNGKAIALGETDGFVKTVFDAKTGELLGAHM
                     IGAEVTELIQGYTIGKTAELVEQDFINSVFPHPTLSEMMHESVLAAFGRVIHI"
     gene            1186..>2123
                     /locus_tag="VHN55_09030"
     CDS             1186..>2123
                     /locus_tag="VHN55_09030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010336035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2804105.1"
                     /translation="MKSILSAAAAAISLSTAATAATLVTAERMLDVKSGRYIDRPAIL
                     IGDDGRIQMIGNLAAMQVPAGTEHIDLPGDTLLPGLIDMHVHLNSLPEIGGYQGLKFT
                     DSFWAAIGPVNAGETIGAGFTTVRNVGSGGFQDIGLRQAIDGGWIAGPRIVAAAYALG
                     ATGGHCDDTNGLPPSLEKVTPGIVTSPEQAREKVRWVHKHGAEVIKICATGGVFSLGD
                     SVGAQQLSLAEMTAIVEEAHMLGLRVAAHAHGDEGIRDAILAGVDTIEHASLASDASI
                     QLAKKHGTWFDMDIYNDDYILATGTANGTEQQSLDK"
BASE COUNT          446 a          688 c          661 g          328 t
ORIGIN      
        1 aggtggtcaa gcgcagccgc gacgtcgccg gcgagctcaa ccgcggcggc accgggctga
       61 tgaagaagaa caagatcgct gttcacatgg gcgaggggca gctcaccggc aaaggcaaag
      121 tcaccgtcgc ggccgacggc aagacgaccg agctccagtg caagcacctt atcgtcgcca
      181 cgggcgcccg ggcgcgtgag ctgccgtttg ccaagtccga cggcaagcgc atctggacct
      241 accgccacgc gatgactccg ccggagatgc cgagcgagct tctcgtcatc ggatccggcg
      301 cgatcgggat cgagttcgct agcttctact cagaccttgg cgcgaaggtg acggtcgttg
      361 agatgctcga ccgagtcgtt ccggtcgaag attcggaaat cagcgacttc ctcgccaagc
      421 agctcaagaa gcaggggatg acgatccaca ccggcgccgg ggtcgagagc ctcaagtcgg
      481 acgccaaggg cgtcacagcg acaatcaaga ccgccgacgg caaatcgtcg gagcacaagt
      541 tcagccacgc cattgttgcc gtgggcatcg ttccaaacac cgaggatatt ggcctcgacc
      601 agctcggcgt gaaaatgacc aagggccata tcgacaccga cgaccattgc cgcaccagca
      661 ctgccgggat ctgggcgatc ggcgacgtta ccgctccgcc ctggctggcg cacaaggcaa
      721 gccacgaagg cgtcaccgct gccgaggcca tcgccaagga gctcggcaag gacgctcacc
      781 cgcacgcgac cgacccgaag aacatccccg gctgcaccta ttgccggccg caggtggcct
      841 ccgtcggcct caccgaagcc gctgccaagg aaaagggcta cgaggtgaag gtcggcaagt
      901 tccccttcat cggcaacggc aaggcgatcg cactcggcga aaccgacggc ttcgtgaaga
      961 ccgtgttcga tgccaaaacc ggcgaactgc tcggagcgca catgatcggc gccgaggtca
     1021 ccgagctgat tcagggctat acgatcggca agaccgccga gttggtcgaa caggacttca
     1081 taaatagcgt cttcccgcac cccactttga gtgagatgat gcacgaaagc gttcttgccg
     1141 cgttcgggcg tgtgattcac atctgacggg gagggggcta cccgaatgaa gagcatcctg
     1201 tcggctgccg ccgcggccat ttcgctcagc acggccgcaa cggccgcgac gctcgtcacc
     1261 gccgagagga tgctcgacgt gaagtccggc cgctatatcg accgccccgc gatcctgatc
     1321 ggcgacgacg ggcggatcca gatgatcggg aatctcgcag ccatgcaggt acccgccggg
     1381 accgagcata tcgaccttcc aggcgacacc ctgcttcccg gtcttatcga catgcacgtt
     1441 cacttgaatt ccctgcctga aatcggcggc taccagggcc tcaaattcac cgacagcttt
     1501 tgggctgcga tcgggccggt caacgccggc gagacgatcg gagccggctt caccactgtc
     1561 cgcaacgtcg gttccggcgg ctttcaggac atcgggctac gccaggcgat tgacggcggc
     1621 tggatcgccg gtccgcgaat tgtcgccgca gcttatgcgc tcggcgctac gggcggtcat
     1681 tgcgacgaca ccaacggcct tccgccgtca cttgaaaagg tgaccccggg gatcgtcacc
     1741 agccccgagc aggcccggga aaaagtgcgc tgggtccaca agcatggcgc cgaggtgatc
     1801 aagatctgcg cgaccggcgg ggttttctcc ttgggcgaca gcgttggagc gcagcagctc
     1861 agcctcgccg agatgacggc gatcgtggag gaagcacaca tgctgggcct tagggtcgcc
     1921 gctcatgccc acggcgacga aggaatccgc gatgccatcc tggccggggt cgacacgatc
     1981 gaacatgcga gcctcgcgag cgatgccagc atccagctcg cgaaaaagca cggcacctgg
     2041 ttcgacatgg atatctataa cgacgactat atcctcgcga ccggcactgc caacggcacc
     2101 gagcagcaga gcctcgacaa gga
//
LOCUS       DATAKH010000218         7028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_29580,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000218 DATAKH010000000
VERSION     DATAKH010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7028
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29580"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..904
                     /locus_tag="VHN55_09035"
     CDS             23..904
                     /locus_tag="VHN55_09035"
                     /inference="COORDINATES: protein motif:HMM:NF042482.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6625 family protein"
                     /protein_id="HEX2804106.1"
                     /translation="MNHSIAILIPYFGNWPRWMNFFIESCRANPTIDWIFFTDSAPPE
                     NRARNVRYVQASFAEYKDELAQKLGTKIAADAPYKLCDVRPALPYAHADLVEGYDFVG
                     FGDIDVIYGDIRAFYDSETLDRYDLLSSHRDRVSGHLCLFRNAPEMVTAFQRVSGWKD
                     AFGNRDYVNFDERAFYNYLRGKRGRWLKARPVEQRCLFREAYSTPGVTDRMRWYWKDG
                     TLTNEFYPLHPFMYLHFMSWHSNRWYVSQPGAAPGTPAPWSLHQDLVRMDWKDARKQG
                     FMISPRGIEPIAPPLYP"
     gene            complement(901..1698)
                     /locus_tag="VHN55_09040"
     CDS             complement(901..1698)
                     /locus_tag="VHN55_09040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804107.1"
                     /translation="MVAGGGFGVRADCVTLWVGDALGPVERACLRSILRHGHSVALYC
                     YRKPAGIPAGVEVRDASAILPQDRIPPEWWGRADLYSDWFRYVLLQRGLGTWVDSDIY
                     LVAPLDMEKPYLFGVEDAPMLNNAVLRTPPDSPLLPRLLEPFVRRTTPRWMPLRKYLP
                     MRAREILTGRVDLAKIPWGTTSPRALTALTLEYGLHDLAEPQERFYPMPWQQARWILD
                     PAVSIDDVTTADTVAVHLWNRCIADFKNEPAPPGSFLHRLQLEGAQP"
     gene            1766..3649
                     /locus_tag="VHN55_09045"
     CDS             1766..3649
                     /locus_tag="VHN55_09045"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2804108.1"
                     /translation="MSVLLYYAAMTAAAAQELELGLWTGLKQVYAQMTRQRRRQFAAV
                     LALMLAGGLAELATIGSVVPFLGLLSQPGATMALPWPVPMLGALGERIGVGAVTAAAL
                     VFAGFAVIAGLVRLLLTRATQDFIYRLGQELMLEAQRRILLQPYPFYMERNTSTLISS
                     IEKVEIFVLALLLPLMQMLTAAVLAAFIVAALLVVDQVTAIVAAAVFSGVYLLVSALT
                     RKRLAANSAVLKTAYNERLKIAQESLGGIRDVILENSQSMHLALFDRVNGRLARARAT
                     TAFISTAPRYIIETAGIVAIAAMALLISARDGGVGLALPILGAIALGAQRLLPLLQQI
                     YAGWSNSAGYLSLIGQVVEFLRLPVPPRAGSDRANPLPFNDRITLEGVSFGYVSRPKS
                     PALESVTFDIRRGEMIALTGETGCGKSTLADLLMGLLQPSEGRICVDSAEITPANARR
                     WQQNVAHVPQSIFLADTTIGRNIALSHADEALDLPRIVEAARMARVHDFIETLPQGYD
                     TLVGERGVRLSGGQRQRLGLARAIYKQAPLLVLDEATSALDEATEAAVIDGLEKLRSD
                     GCTIVVIAHRLSTISRCDRVAKLHKGRLVEVGSVTEIAVPVPNGRRRRPGRERSGRAP
                     VRR"
     gene            complement(3646..4704)
                     /locus_tag="VHN55_09050"
     CDS             complement(3646..4704)
                     /locus_tag="VHN55_09050"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HEX2804109.1"
                     /translation="MSPRDAPSLSVVMPVHNALPYLDEAVESIRAQTRSDFEFVIYDD
                     QSTDGSAERLEEWARRDSRIKLFRGKRNLGPAHSSNEVVRLASGSLIARMDADDISLP
                     ERLERESKVLEDHPDVGLVGSLCNLIDPQGRTLRGPELWRLTRKSWLSPFPHGSMMFR
                     RELFDAIGGYRAECEYWEDLDFVIRASEQTAILVLPMALYHHRQSYSSTRLASEQRRV
                     EDALDLRYRSMSRVSQRSNYSELEQCGPAEEGRRVHPRIFVSLGSLQLWSGRRPRVLR
                     RFLTRARLGFDVDTFVSAAWVLWASLSPSTLRASINLVSKIRSNSASNSLDLEKPVEW
                     RPQDKGRDGENAAEKQPA"
     gene            4834..5883
                     /locus_tag="VHN55_09055"
     CDS             4834..5883
                     /locus_tag="VHN55_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007165673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEX2804110.1"
                     /translation="MARKYLQQKRVLVTGGAGFLGSHLCDRLIEAGHEVLCLDNFYTG
                     SRRNVAHLLDNPAFEVLRHDITFPLYVEVDQIYNLACPASPIHYQHDPIQTTKTSVAG
                     AINMLGLAKRLRIPILQASTSEVYGDPAVHPQSEDYWGHVNPIGPRSCYDEGKRCAET
                     LFFDYHRQLGLKIKVARIFNTYGPRMHPNDGRVVSNFIVHALEGQAITLYGDGSQTRS
                     FCYVDDTVEGLIRLMNSPDDVTGPINIGNPHEISVRELAEIIVDKTAASGELISCDIP
                     ADDPQQRQPDIARARDLLGWEPTVSLDEGLDRTIDYFRELIGPNEERQADSARLDKSM
                     GRSQPEKAMKRSSSF"
     gene            5951..6889
                     /locus_tag="VHN55_09060"
     CDS             5951..6889
                     /locus_tag="VHN55_09060"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX2804111.1"
                     /translation="MANARVLITGGAGNIGGSLARHLESTGKYEVLVVDNLQTGSLEK
                     LPATSSTFHFVRADVNHYEEVAPIFSSYRPDYVFHYAAVVGVARTLSNPMEVLKDIDG
                     IRNVLTLSKGTGVKRVFYSSSSEVYGEPVELPQREETTPLNSRLPYAVVKNLGEIYFR
                     TFHREYALPVTIFRFFNTYGPLQSEDFVISKFVARAIRGDDLTIYGDGKQTRTFCYVD
                     DSIEFQVKCLENDLFVNETVNVGSDQEIEIVELAELVKKLINPKLKTIQLPALPEGDM
                     TRRRPDNSRMVQTLGRALLPLSDGIMRTAEFLRSRT"
BASE COUNT         1332 a         2325 c         2100 g         1271 t
ORIGIN      
        1 ctgcgcttga gttgctcggc cgatgaatca cagcatcgcg atcctgattc cctatttcgg
       61 caattggcct cggtggatga atttcttcat cgagagctgc cgagccaacc cgacgatcga
      121 ctggatcttc ttcaccgact cggcgccgcc ggagaatcgc gcccgcaacg tccgctatgt
      181 ccaggcgtcc ttcgcggaat ataaagacga gctggcgcaa aagctcggca cgaaaattgc
      241 cgcggacgct ccgtacaagc tgtgcgacgt ccggcctgcg ctgccctacg cccacgccga
      301 tctcgtcgag ggctatgatt tcgtcggctt cggcgacatc gatgtcatct acggcgacat
      361 ccgcgccttc tatgattccg aaaccctcga ccgctacgac ctgctgtcgt cgcaccgcga
      421 tcgcgtgtcc ggccatctgt gcctgtttcg aaacgccccg gagatggtca ccgctttcca
      481 gcgggtgagc ggctggaaag acgcattcgg gaaccgcgac tatgtcaatt tcgacgaacg
      541 cgccttctac aactacctgc gcggaaagcg cgggcgctgg ctcaaggcac gccctgtaga
      601 gcagcgatgc ctgttccggg aggcgtacag cacccccggg gtcaccgatc gcatgcgctg
      661 gtactggaag gacggcactc tcaccaacga gttctacccg ttgcacccgt tcatgtacct
      721 gcacttcatg agctggcaca gcaatcgctg gtatgtgagc cagcccggcg ccgcgccagg
      781 cacgccggcc ccgtggagcc ttcaccagga ccttgtacgg atggactgga aagatgcccg
      841 caagcagggc ttcatgatca gcccacgcgg gatcgagccg atcgccccgc cgctctaccc
      901 ctagggctga gcgccttcca gctggagccg gtgcaggaac gacccgggcg gggccggctc
      961 gttcttgaag tcggcgatgc agcgattcca caggtgaacg gcgaccgtgt cggcggttgt
     1021 cacgtcgtcg attgaaacgg cgggatcgag gatccatcgc gcctgctgcc aaggcatcgg
     1081 ataaaagcgc tcctgcggct ccgccaggtc gtggagcccg tactcgagcg tgagcgccgt
     1141 caaagcccgg gggctcgtgg ttccccacgg tattttcgcc aggtcgacgc gccccgttag
     1201 aatctcgcgg gcccgcatcg gaagatattt gcgcaatggc atccacctgg gcgtggttcg
     1261 ccgaacgaac ggctccagca atcgtggaag cagcgggctg tccggcggtg tcctgaggac
     1321 cgcgttattc agcatcggcg catcttccac cccgaacagg tacggctttt ccatatcgag
     1381 aggcgcgacg agatagatgt cgctgtccac ccaggtgccg agcccgcgct gcaggagcac
     1441 gtagcgaaac cagtccgaat acaggtccgc ccgaccccac cattccggcg ggatcctgtc
     1501 ttgcgggagg atcgccgagg cgtcccgaac ctccacccca gccggaatgc ccgcgggctt
     1561 gcgataacaa tagagcgcga ccgaatgccc gtggcgaagg atcgagcgga ggcaggcgcg
     1621 ctcgaccggg ccgagtgcat cgccgaccca caaagtcacg cagtcagccc gcaccccgaa
     1681 tccccctcca gccaccatgt tccgcccgac tgcaatatcg tcccgccgat gccggcgcta
     1741 aattgcgaag tggggtttgt cgacggtgtc ggtcctgctc tactacgcgg cgatgacggc
     1801 agctgctgcg caagagctgg aacttggcct gtggacgggc ctgaagcaag tttatgcgca
     1861 gatgacccga cagcgccgcc ggcaatttgc cgcggtcctg gcgctgatgc tcgccggcgg
     1921 ccttgccgaa ttggcgacca tcgggtcggt ggtgcctttc cttggcctgt tgtcgcagcc
     1981 gggcgcgacg atggctcttc cctggccggt accaatgctc ggcgcgctcg gcgagcggat
     2041 cggcgtcggg gcggtgaccg cggcggcgct cgtcttcgcg ggctttgccg tcattgcggg
     2101 gctcgtcagg cttctcctga cccgggcgac gcaggacttc atctaccgcc ttgggcaaga
     2161 gctgatgctc gaagcacagc ggcgaatcct gctccagccc taccccttct acatggagcg
     2221 caataccagc accctgatct cgagcatcga gaaagtcgaa atcttcgttc tagcgctcct
     2281 gcttccgctg atgcagatgc tcaccgccgc cgtcctcgcc gcgttcatcg tcgcagcctt
     2341 gctggtcgtc gaccaggtta cggcaatcgt ggcggctgcc gtattttcag gcgtttacct
     2401 gctcgtctcg gccctcacca gaaaacggct tgcagccaat tcggcggtgc tcaaaaccgc
     2461 ctacaacgag cggctgaaga ttgcccagga aagcctcggc ggcattcgcg acgtcattct
     2521 cgagaactcg caatccatgc atctcgctct gttcgacagg gtgaacggac ggctcgcgcg
     2581 ggcgagggca accaccgcgt tcatatcgac cgctccgcgc tacatcatcg aaaccgccgg
     2641 aatcgtggcg atcgctgcaa tggcgctgct catctcggcc cgcgacggcg gcgtcggtct
     2701 tgccttgccg atcctcggag cgatcgcctt gggcgctcag cggctgcttc cgctgctcca
     2761 gcagatttac gccggttggt ccaactccgc cggctatctt tcgctgatcg ggcaggttgt
     2821 cgagttcctt cgcctgcccg ttccgccccg ggcagggagc gaccgcgcaa atccgctccc
     2881 gttcaacgat cggattaccc ttgaaggcgt cagtttcggc tacgtgagcc gcccaaagtc
     2941 gcctgcgctc gaaagcgtta cgttcgacat ccgccgaggc gagatgatcg cgctcaccgg
     3001 cgagaccggc tgcgggaaat cgaccctggc cgatctgctg atggggctct tgcagccgag
     3061 tgaaggccgg atttgcgtcg acagcgccga gatcacacca gcgaacgccc gccgctggca
     3121 gcagaacgtc gcccacgtgc cgcaatccat cttccttgcc gacaccacca tcggccgcaa
     3181 catcgctctt tcccacgccg acgaagcgct cgatttgccg cgtatcgtcg aagcggcgcg
     3241 aatggccagg gttcacgatt tcatcgagac cctgccgcag gggtacgaca ctctcgtcgg
     3301 agagcgcgga gtgcgccttt ccggaggcca gcgccagcgg ctgggcctcg cccgcgccat
     3361 ctacaagcag gcaccgctcc tggtgctcga cgaagcaacc agcgcgctgg atgaagcgac
     3421 cgaggcagcg gtgatcgatg gcctggaaaa gcttcggagc gacggctgca caatcgtcgt
     3481 catcgctcac aggctctcaa cgatctcgcg ctgcgatcga gtcgccaagc tccacaaggg
     3541 gcgattggtc gaggttggca gcgttacgga gattgccgtc ccggttccaa acggtcggcg
     3601 gcggcgccca ggccgggaac ggtccggccg ggctccggtt cgacgctaag cgggttgctt
     3661 ctcggcagcg ttctcgccgt ccctgccctt gtcctgcggc cgccattcca ccggcttttc
     3721 gaggtccagg ctattcgaag cggaattgct tcgaattttc gacacgaggt tgatcgacgc
     3781 gcgcaacgtt gacgggctta gggatgccca caacacccag gcggccgaaa cgaacgtgtc
     3841 gacatcgaag cccagcctgg cgcgggtcag gaagcgccgg agtactcgag gccgccgtcc
     3901 ggaccacaac tgcagcgagc caagcgaaac gaagatccgc ggatgcaccc gccgtccctc
     3961 ctccgccgga ccgcattgct ccagctcgct gtaattgctg cgctggctga cccgggacat
     4021 cgaacggtat ctgagatcga gcgcatcctc gacgcgccgc tgctccgatg cgagcctcgt
     4081 gctcgagtag gactggcggt ggtggtacaa ggccatcggg agcacgagta tcgcggtctg
     4141 ttcggacgcg cggatcacga agtccaggtc ctcccaatat tcgcactcgg cgcgatagcc
     4201 tccgatcgcg tcgaacagtt cccggcggaa catcatggac ccgtggggaa acggagacag
     4261 ccacgacttg cgcgtaagcc gccagagttc ggggccacgg agcgttctcc cctgcgggtc
     4321 gatcaggttg cagagagagc ccacgagccc gacgtcaggg tgatcttcaa gaaccttcga
     4381 ttcgcgctcc agccgctccg gaagcgagat gtcgtcggca tccattcgag cgatcagcga
     4441 tcccgacgcc agacggacga cttcgttcga gctgtgcgcc gggccgaggt tccgcttccc
     4501 gcggaaaagc ttgatccggg aatcgcgccg cgcccactct tcaagccgct cggccgatcc
     4561 gtcggtcgac tgatcgtcgt agattacgaa ctcgaaatcg gaccgggtct gcgcgcgaat
     4621 gctctccacc gcctcatcca gatagggaag agcgttgtgg acgggcatga cgacgctgag
     4681 agacggggcg tcccgaggac tcatgaaatg ctctgacaca tggctggtta cgcagccatg
     4741 gcgagtggag gagcgccctg ccccaagtca actaaaaagc gggaggcgca tcgcccgctt
     4801 tccttcacat gcgggataat ctaccgcgac cgcatggctc gtaagtacct gcagcagaag
     4861 cgcgtgctcg tgaccggcgg ggccggtttc ctcgggtcgc acctgtgcga tcggctcatc
     4921 gaggcgggcc acgaagttct ctgcctggac aatttctata ccggcagccg gcgaaacgtc
     4981 gcccatctcc tcgacaatcc cgctttcgag gttcttcgcc acgacatcac tttcccgctc
     5041 tacgtcgagg tcgaccagat ctataacctc gcctgcccgg cttcgccgat tcactaccag
     5101 cacgatccga tccagacgac gaaaaccagc gtcgctgggg cgatcaacat gctcggcctt
     5161 gcaaagcggc tgcgcatccc gatcctccag gcctccacca gcgaggttta cggcgatccg
     5221 gcggtccacc cgcaatcgga agactattgg gggcatgtga acccgatcgg cccaaggagc
     5281 tgctacgacg agggcaagcg ctgcgccgag actttgttct tcgattatca ccgtcagttg
     5341 gggctgaaga tcaaggtcgc gcgaatcttc aacacttatg ggccccgaat gcatcccaac
     5401 gacggccggg tggtgtccaa cttcatcgtc cacgcgctcg agggacaggc gatcacgctc
     5461 tatggcgacg gcagccagac ccgcagcttc tgctacgtcg acgacaccgt cgaagggttg
     5521 atccgcctga tgaactcgcc cgatgacgtg accggaccga tcaatatcgg caatccgcac
     5581 gaaatctccg ttcgcgagct cgccgagatc atcgtcgaca aaacggccgc gagcggcgaa
     5641 cttatctcct gcgatattcc agccgacgac ccgcaacagc gccagcccga catcgcccgc
     5701 gctcgcgacc tgctcggttg ggaaccgact gtttcgctcg acgaggggct ggatcggact
     5761 atcgactatt tccgtgagct catcgggccc aacgaggaac ggcaggccga ctccgctcgc
     5821 cttgacaagt caatgggccg aagccaaccc gagaaggcaa tgaagcgctc ctcctccttc
     5881 tgaagcagca gcctcgaagc actcgacgcc gacctcgccc tcctccctct cagcccttca
     5941 ggattgcgcc atggccaacg cacgagttct gattaccgga ggcgccggga acatcggcgg
     6001 aagccttgcg cgccatctag agtccactgg aaaatacgaa gtcctggtcg tcgataacct
     6061 gcaaacaggg tcgctcgaga aactgcctgc cacctcctct acctttcact tcgtaagggc
     6121 ggacgtgaac cattacgagg aagtggcgcc gatcttctcc tcctatcgtc ccgactatgt
     6181 cttccattac gccgccgtcg tcggcgtcgc gcggaccctg agcaacccga tggaggtgct
     6241 caaggacatc gacgggattc gaaacgtgct gacgctaagc aaaggcactg gcgtaaagcg
     6301 cgtcttctat tcgtcctcgt cggaggttta cggagagccg gtcgagcttc cgcaacggga
     6361 agagaccacg ccgctcaatt ctcgcctgcc ctatgccgtc gtaaagaatc tcggcgaaat
     6421 atacttccgc accttccacc gcgaatatgc gcttcccgtc accatcttcc ggttcttcaa
     6481 cacttacggt ccgctccaga gcgaagattt cgtgatctcc aagttcgtcg cgcgcgcgat
     6541 caggggtgac gacctgacca tttatggcga cgggaagcag acgaggacct tctgctacgt
     6601 cgacgacagt atcgaattcc aggtgaagtg cctggaaaac gacctgttcg tgaatgagac
     6661 ggtgaatgtc gggtccgacc aggaaatcga gatcgtggag ctcgcggagc tcgtcaagaa
     6721 gctgatcaac cccaagctca agaccatcca gctgccggcg cttcccgaag gcgacatgac
     6781 ccgccgccgc cccgacaact cgcggatggt gcagacgctc gggcgcgcgc tcctgccgct
     6841 gtcggacgga atcatgcgaa cggcggaatt cctgcggtcg cggacctgag cacgccagcg
     6901 cccaggccta gcttgacatg gcggcgggtc cagtgaaccc atcggccgtg gcaacggcca
     6961 gcagcaatcc agaactagag cgccaggaaa agccccgcgc aaggccgcga gtcctgcacg
     7021 tcatcggt
//
LOCUS       DATAKH010000219        11279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_5850,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000219 DATAKH010000000
VERSION     DATAKH010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11279
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5850"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..638
                     /locus_tag="VHN55_09065"
     CDS             <1..638
                     /locus_tag="VHN55_09065"
                     /inference="COORDINATES: protein motif:HMM:NF012571.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phenylalanine 4-monooxygenase"
                     /protein_id="HEX2804112.1"
                     /translation="TRIVSPFLDGIDLLRLSHPGIPELGELNAILEPRTGWRTVAVPG
                     LVPDDIFFAMLSERIFPVGNFIRRREQLDYLEAPDCFHDLFGHIPMLAHHDFAEMTRH
                     IGELGVAAIGAGKSEPAARLYWHSVEFGLARERGELKILGAGLASSFGEAHFSLENKD
                     VERMPFSVERALHTPYKHDSFQPRYLVSRSLDSTVRDVLALTPKRLLALGG"
     gene            complement(694..1239)
                     /locus_tag="VHN55_09070"
     CDS             complement(694..1239)
                     /locus_tag="VHN55_09070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804113.1"
                     /translation="MSRGNIWRLVGWGLAVAVILTPLVAMQLNAPGVNWTIGDFIFAG
                     VLIGGVGGLFELAVRSSASWAYRGGVALALAAAFLTIWINGAVGIIGDEGGGANLVFH
                     VVVLLAITGAIVAGGKARLMSRAMMVPAVAQLLIAIYVAATGIGANDPPGQPGLSFLI
                     GGFGVIWLGSALLFRHAAAQQ"
     gene            1350..2408
                     /locus_tag="VHN55_09075"
     CDS             1350..2408
                     /locus_tag="VHN55_09075"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX2804114.1"
                     /translation="MTRATFRFDRFQLDLGDRQVSDGDSPLELNSRYFDALALLVGNQ
                     GRLVSKDRFMEEVWRGVPVTDEALTQCIRTLRRQLGDDAARPRFIETVPKHGYRFIAP
                     VEVEGEHIAETASSSRSWHRYALLGLAGVVGGGLAGFIGGLFYGFAGASQPLQPGMGA
                     VSVLLVLLALTIIVALIGAAGVAFGIAGAAFASGRIGPWSIAGGALGGLIVGAVVKLL
                     GLDAFTLLFGRAPGEITGAFEGFVLGAAVGLGTWLATRRSMLRYGTIAAAALGGLAGM
                     AIPLLGGRLMGGSLALLADHFPGSRLRLDRIGALFGETGFGAVTQTVTATLEAALFSG
                     FVVAAMLLAKRQLEQGRD"
     gene            2449..3138
                     /locus_tag="VHN55_09080"
     CDS             2449..3138
                     /locus_tag="VHN55_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804115.1"
                     /translation="MAYRAGNTRDRWKASVGAVAVTAILGAGILSGLNVDTVSSVVDR
                     LRTFDIAIPEPAPPEQPPPKPQPKQAKEEEAAPAAPKPSPIVAPEPKVEVPTRQDVAA
                     AERAGTGTSSSAGQGGAGTGTGSGGAGTGRGGGGAGNTPALLVRNLTRSDYRSLTGGR
                     MPAGAAGVAIRVNAGGRVDSCSVEHSSGDSTIDAGLCPLIRSRLRFQPARDAQGRPIP
                     FYTHYRATWRR"
     gene            complement(3139..4488)
                     /locus_tag="VHN55_09085"
     CDS             complement(3139..4488)
                     /locus_tag="VHN55_09085"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2804116.1"
                     /translation="MRKLRTGLVPVRASSLMLGVAASLVAAPIVLPAPVHAADWSVPR
                     GQEVDDFYKVRSGRPLWFQAGQPTAAAHALLSLLTTARADGLDPGRYKVDEIREALKR
                     ASNGDQRAVRKADMLLSSRFAAYARDLKAFPTAGLAYADPALRLGPPSPLRLLQMAEK
                     APSLTQFVADMGWMNPAYASLRRAFISGSFENDRQRELLRINLERARVLPASDRYIIV
                     NVASQRLYMYEGTRLADTMKVVVGQDRAERKTPMMAGYLRYASLNPYWNVPPDLVWDD
                     VGKYVEEFGLGYLKSRGHQVLSDWGDNPSVVDPSTVDWDAVRAGTVQIRVRQLPGPQN
                     FLGKVKYAFTNPFGVYLHDTPKKELLKEQTRLFSGGCIRLEDADRLGRWLFGKTLVAQ
                     SDEPDIEVALDKPVPVFVTYMTAEPSGTSITYFDDVYGWDAERLAELGFGGKHVAAR"
     gene            complement(4507..5052)
                     /locus_tag="VHN55_09090"
     CDS             complement(4507..5052)
                     /locus_tag="VHN55_09090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804117.1"
                     /translation="MRKSILAAVLAGTATLGACASNPRVAQDAAIGGLGGAAVGAVVP
                     GVSVAEGAVAGAVIGGLAGAIWADQNNDGYVDGYVYNGQYYAGTPAGYDNTLGRVATG
                     AGIGAGVGAVAGAVIPGLGVIEGAVIGAAVGGLAGAVWSDSNNDGRVDGYIYNGQYYP
                     GQPPASTAPTYPAPVRAGERG"
     gene            5236..5595
                     /gene="arsC"
                     /locus_tag="VHN55_09095"
     CDS             5236..5595
                     /gene="arsC"
                     /locus_tag="VHN55_09095"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013832239.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEX2804118.1"
                     /translation="MNRSAKATIFHNPMCGTSRKTLDILREAGRDVWIREYLKDPPTR
                     DELKAMYDRAGITPRQGLRAKEPLAAELGLTAPDVDEDTILDAMIEHPILIERPLVET
                     DKGVRLCRPQDTVREIL"
     gene            5606..6370
                     /gene="aat"
                     /locus_tag="VHN55_09100"
     CDS             5606..6370
                     /gene="aat"
                     /locus_tag="VHN55_09100"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEX2804119.1"
                     /translation="MTALDPRLLLQGYAIGIFPMADSRDAEDVFWVEPRERAIIPTGG
                     FHLSRSLARVLRSGRFTVSLDQDFAQVIAACADRDETWINPGIERAMLALHRLGHAHS
                     IEVWDGDGSSSDLVGGVYGVKLGRAFFGESMFSRRTDTSKVALSWLAARLKAGGYSFL
                     DCQFMTGHLASLGAVAVSRETYSEMLAAALGGGADGWTALGDGAAGSAAGASEGCPDS
                     RGGEFWALDRLLEAAGAEGGGGPAGKVIAQLLGQTS"
     gene            complement(6406..6783)
                     /locus_tag="VHN55_09105"
                     /pseudo
     CDS             complement(6406..6783)
                     /locus_tag="VHN55_09105"
                     /inference="COORDINATES: protein motif:HMM:NF021444.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2155 domain-containing protein"
     gene            complement(6789..7172)
                     /locus_tag="VHN55_09110"
     CDS             complement(6789..7172)
                     /locus_tag="VHN55_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007688672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010257 - NADH dehydrogenase complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase subunit NDUFA12"
                     /protein_id="HEX2804120.1"
                     /translation="MGFWSRTFTWWSGDTWGTKLFTWRFGDEVGRDDRGNVYYQSKKD
                     PSRRWVVYPADNDGSRVPPGWALWLRGTIDGLPEDSLPPAREWQKTPVPNATGTMAAF
                     RPDGALGSNKVRPASTGDYQPWKPE"
     gene            complement(7212..7640)
                     /locus_tag="VHN55_09115"
     CDS             complement(7212..7640)
                     /locus_tag="VHN55_09115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017669577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEX2804121.1"
                     /translation="MACSPNVAPAEPLGEEAQTGLRQVPLTITSANGAHRFTVDVAAT
                     PAEQQRGLMYVKSLAPDRGMIFPYATPQQVAFWMHNTLIPLDIIYIRADGTIARITTA
                     RPLDDTPLPSGEPVLNVLEIAGGRAAELGIRPGDKVNWSR"
     gene            complement(7673..8335)
                     /locus_tag="VHN55_09120"
     CDS             complement(7673..8335)
                     /locus_tag="VHN55_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HEX2804122.1"
                     /translation="MARISQPQPEHVSTESVAPDSAKVEPVAVPSDSEPAAVPADADA
                     AVVSADDDGAVVSARVKWFDATRGFGFLVSDDVDGDILIHFSVLKEHGRRSLPEGALV
                     ECVPTRLERGLQAKRVISIDTSESIVPTRQAVPAASRADRGVLVDSAGDFETVEVKWF
                     NRAKGYGFLNRPGIDGEDIFVHMETVRSCGAGELQQGQIVEARVAEGRKGLTAVEVRQ
                     IS"
     gene            complement(8392..8940)
                     /locus_tag="VHN55_09125"
     CDS             complement(8392..8940)
                     /locus_tag="VHN55_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HEX2804123.1"
                     /translation="MARRTDRRPRPPLDQDKLSELALSYVGRFATTRAKLASYLARKL
                     RERGWEAERPADIDTIVERLVDLGYVDDAAYALSKSRALTGSGYGARRVRQSLRAAGI
                     GEEDGMEAAAAADSEAVESALRFARRRRIGPYGNGGGDRSDRERVLAAMIRAGHSFAL
                     AKAILSIEPGSNIDVEFLKEKG"
     gene            9031..10791
                     /locus_tag="VHN55_09130"
     CDS             9031..10791
                     /locus_tag="VHN55_09130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
                     /protein_id="HEX2804124.1"
                     /translation="MPDSNSTDRAGLAPEGATPTVDDLPRRIADFDTLAEALDYAALG
                     RKGMNFHDARGTLVRAYPYSELREDAIANARRFVGLGIKPGERIAITAETGPEFAAAF
                     FGAVYAGAWPVPLPLPTSFGGRQGYVDQLKVQLQSCDPSLFIVPSALAEISAEAAGHV
                     PVRAWESLPELEESDADLPAADPDAIAYLQYSSGSTRFPHGVAITHRALLDNLRAHGI
                     GLDMQPTDRCVSWLPWYHDMGLVGCMLSLVANQLSVDYLKTEDFARRPLAWLDLITRN
                     PGISVSYSPTFGYDICARRMSSQTRAEDRFDLSRWRIAGNGADMIRPDVMQAFVDAFA
                     SAGFDASAFCPSYGLAEATLAVSLMPPGEGIRIELVEENELSGGESAEEGRPRRYRAV
                     VNCGKPVQGMEVEVRGPDGEVLPDRGIGRIFVRGGAVMVGYFRDQESTDACLSSDGWL
                     DTGDMGYMSRGYIFIVGRAKDMIIINGRNYWPQDIEWAVEQLPGFKSGDIAAFAITGP
                     SGEETPAVLVHCRVSDPHERGRLRDDIRERVHAITGISAIVELVPPRTLPRTSSGKLS
                     RTKARSLYLSGEIQPYDIAA"
     gene            10825..>11279
                     /locus_tag="VHN55_09135"
     CDS             10825..>11279
                     /locus_tag="VHN55_09135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804125.1"
                     /translation="MNSLDQTATGIDETTITLGLQLAVTAGFAVAMVVLHTLGLVAIS
                     RLLRLKEERLLKHEFNLGAVGLLASFGFLVLLLHMLEIAVFGIFYMLVSSMDLEEALF
                     YSASAYATLGWTADYFPDSWRLIGAVEALIGFILIGWSTAFMVTTMRKLS"
BASE COUNT         1762 a         4003 c         3585 g         1929 t
ORIGIN      
        1 gcacccgaat cgtctcgccc ttcctcgacg ggatcgacct gctccgcctc tcgcaccccg
       61 gaatccccga gcttggcgag ctcaacgcga tcctcgagcc gcgaaccggc tggcgcaccg
      121 tcgccgttcc cggcctcgtc cccgacgaca tcttcttcgc tatgctgtcc gagcgcatct
      181 tccccgtcgg caatttcatc cgccgccgcg agcagctcga ctatctcgag gcgcccgact
      241 gcttccacga cctgttcggc cacatcccga tgctcgccca ccacgacttc gcggagatga
      301 cccggcacat cggcgagctc ggcgtcgccg cgatcggcgc cggcaaaagc gagcccgccg
      361 cccgcctcta ctggcacagc gtcgaattcg gcctcgcgcg cgagcgcggc gagctcaaga
      421 tcctcggcgc cggcctcgcc tccagcttcg gcgaagccca cttcagcctc gaaaacaaag
      481 acgtcgagcg catgcccttc tccgtcgagc gggcgctgca cacgccctac aagcacgact
      541 ccttccagcc gcgctacctt gtctcgcgga gcctcgattc aaccgtccgc gacgtcctcg
      601 ccctcacccc gaagcgcctg ctcgccctcg gcggctgagc ggcgcgaagc tcgtccgctc
      661 gctgctcgag cctgtgaagg agaagccggg cgctcattgc tgggcggcgg cgtggcggaa
      721 cagcagcgcc gatcccagcc aaatcacccc gaacccgccg atcaggaacg aaagtcccgg
      781 ctgccccggc gggtcgttcg cgccgattcc ggtcgcggcg acatagatgg cgatcagtag
      841 ctgtgcgacc gcaggcacca tcatcgcccg gctcatcaac cgcgccttgc cgccggcgac
      901 gattgcgccg gtaatcgcca gcaggacgac cacgtggaag acgaggttgg cgccgccgcc
      961 ttcgtcgccg atgatgccga ccgcgccgtt gatccagatc gtcaggaaag cagccgcgag
     1021 cgcaagcgcc acgccgccgc gataggccca gctggccgac gacctgacgg caagctcgaa
     1081 cagcccgccg accccgccga tcagaacgcc cgcgaagatg aagtcgccga tcgtccagtt
     1141 cacgcccggc gcgttaagct gcatcgccac cagcggggtc aggatgactg cgacggccag
     1201 cccccatccc accaatctcc aaatatttcc cctgctcatc gtccccgctc cgttcgtcat
     1261 tgccttgcct ttcatacctg tttgcggctt caaccatggc ccggtcttcg ctgagcggca
     1321 tgagcaatag atgaggtctt gctgaaatcg tgactcgcgc cactttccgc ttcgaccgct
     1381 tccagctcga cctcggcgac cgccaggtca gcgacggcga ttcgccgctc gagctcaaca
     1441 gccgttattt cgacgcgctc gccctgctcg tcggcaacca gggccggctg gtgtccaagg
     1501 accgcttcat ggaggaggtg tggcgaggcg tccccgtcac cgacgaggcg ctgacccagt
     1561 gcatccgcac gctccgccgc cagctcggcg acgatgccgc ccgcccgcgc ttcatcgaga
     1621 ccgtgcccaa gcacggctac cgcttcatcg cgcccgtcga ggtggaaggc gaacatattg
     1681 ccgaaacggc gtcgtcgagc cgctcctggc accgctatgc cctgctcggc ctcgccgggg
     1741 tcgtcggcgg cgggctcgcc ggcttcatcg gcggactctt ctacggcttc gccggagcgt
     1801 cccagcccct tcagccgggg atgggggcgg tgtcggtgct cctcgtcctt ctcgctttga
     1861 ccatcatcgt cgcgctgatc ggtgccgcgg gggtcgcatt cggaattgcc ggggccgcct
     1921 ttgcatcagg ccggatcggc ccctggagca tcgccggcgg cgcgcttggc ggcctgatcg
     1981 tcggcgcagt cgtcaagctt ctcggcctcg acgccttcac cctgctgttc ggccgcgcgc
     2041 ccggcgaaat caccggcgcc ttcgagggct tcgtcctcgg cgccgcggtc ggccttggga
     2101 catggcttgc gacccggcgc tcgatgcttc ggtacggcac catcgccgcg gctgctctgg
     2161 gaggtcttgc cggaatggcg atcccgctgc tcggcgggcg gctgatgggc ggaagcctcg
     2221 cactcctcgc cgaccatttc cccggctccc gccttcgcct cgaccgaatc ggcgctttgt
     2281 tcggcgaaac cggattcggc gcggtcaccc agacggtcac cgccacgctc gaagctgcgc
     2341 tgttttccgg cttcgtcgtc gctgcgatgc tgcttgccaa gcgccagctc gagcaggggc
     2401 gcgactgaag caaactttcc gccgtttgga cgttggctag gcgcagccat ggcttacagg
     2461 gccggaaaca cgcgcgatcg ctggaaagcg agtgtcgggg cggtcgcagt caccgccatc
     2521 ctcggcgctg gaatacttag cggcctcaac gtcgacacag tcagcagcgt cgtcgatcgt
     2581 cttcgcacct tcgacatcgc gatccccgag cccgctcccc ccgaacagcc accgcccaag
     2641 ccgcagccga agcaggcgaa ggaggaggaa gcggcacccg cggcgccgaa gccctcgccc
     2701 atcgtcgctc cggagcccaa ggtggaggtc ccgaccaggc aggacgtggc ggccgccgag
     2761 cgggctggca cgggcacgtc ctcctccgcc ggccagggcg gcgccgggac gggaaccgga
     2821 tcgggcggag ctggaaccgg tcgcgggggc ggcggggccg gcaacacgcc cgcgctgctg
     2881 gtccgcaacc tcacccgctc cgactaccga agcctcaccg gcggtcggat gccggccggg
     2941 gctgcagggg ttgccatccg ggtaaacgcc ggcggccgag tcgattcctg cagcgtcgag
     3001 cattcgagcg gcgattcgac aatcgatgcc gggctgtgcc cgctcatccg ctcgcggcta
     3061 cgcttccagc ctgcgcgcga tgcgcagggc cggccgatcc ccttctacac ccattatcgc
     3121 gcgacctggc ggcgctgatc agcgcgccgc gacgtgcttc ccgccgaagc ccagctcggc
     3181 cagtcgctcg gcatcccagc cgtagacgtc gtcgaaataa gtgatcgacg tcccgctggg
     3241 ctccgccgtc atgtaggtaa cgaacaccgg taccggcttg tcgagcgcga cctcgatgtc
     3301 aggctcgtcc gactgcgcca cgagcgtctt tccgaatagc catcggccca gccggtcggc
     3361 gtcctcgagg cggatgcagc cgccgctgaa cagccgcgtc tgctccttca gcagctcctt
     3421 cttcggcgtg tcgtggagat aaactccgaa cgggttggtg aaggcatatt tcaccttgcc
     3481 gaggaaattc tgcggccccg gaagctggcg gacccggatc tggaccgttc cggcgcggac
     3541 ggcgtcccag tcgaccgtgc tcgggtcgac gaccgagggg ttgtcgcccc agtcggacag
     3601 gacctggtgg ccgcgggact tgagatagcc gagcccaaat tcctcgacat atttgccgac
     3661 atcgtcccag accaggtcgg gcgggacgtt ccaatagggg tttaacgagg cgtagcgcag
     3721 gtagccggcc atcatcggcg ttttccgctc ggcccggtcc tgcccgacga cgaccttcat
     3781 cgtatcggcg agccgggttc cctcgtacat gtagagccgc tgcgaagcga cattgacgat
     3841 gatgtagcga tccgaagccg gcagcaccct ggcgcgttcg agattgatcc tgagcagctc
     3901 gcgctggcgg tcgttttcga aacttccgga gatgaacgcc cgccgaagcg acgcataggc
     3961 cgggttcatc cagcccatgt cggcgacgaa ctgggtcagc gacggcgcct tctccgccat
     4021 ctgcagcagc cggagcggcg acggcgggcc gagccgaagc gccgggtcag cataggccag
     4081 cccggccgtc ggaaatgcct tcaggtcgcg ggcgtaggcg gcgaaccggc tgctcagcag
     4141 catatccgcc ttgcggacgg cgcgctggtc gccgttcgac gctcgcttga gcgcctcgcg
     4201 aatttcgtcg accttgtagc gcccggggtc gagcccgtcg gcgcgcgcgg tcgtcagcag
     4261 cgacagcagc gcgtgggcgg ccgccgtcgg ctggccggcc tggaaccaca aggggcgccc
     4321 cgagcgaacc ttgtagaagt cgtcgacctc ctgtccgcgg gggacggacc aatccgctgc
     4381 gtgaacgggt gcgggcaaga cgatcggcgc cgccacaagc gaggcggcga cgccgagcat
     4441 cagtgaagaa gcgcgcaccg gcacgaggcc ggtgcgcaat ttacgcatac tgatcacgtc
     4501 agtggcttat ccgcgctcac ctgcacgaac cggggccgga taggtcggcg ccgtgctcgc
     4561 gggcggctgg cccggataat attggccgtt gtagatatag ccgtcgaccc ggccgtcgtt
     4621 gttgctgtcg gaccagaccg cgccggcgag accgccgacc gcagcgccga tcaccgcgcc
     4681 ttcgatgact ccgaggcccg gaatgaccgc tccggcaacc gcgccgacac cggcaccgat
     4741 tcccgcgccg gtcgcaacgc ggccgagcgt gttgtcgtat ccggcgggcg tcccggcata
     4801 atattgtccg ttatagacat agccgtcgac atagccgtcg ttgttctggt cggcccagat
     4861 ggcgccggcg agaccgccga tcaccgcacc ggcaacagcg ccttcggcaa cgctcacgcc
     4921 cggcacgacc gcgccgacgg cagcgccgcc gagtccgccg atcgcggcat cctgggcaac
     4981 gcgcggatta gaggcgcacg caccaagggt tgccgttccg gccagcactg cggccaaaat
     5041 ggattttcgc atcgtctatc tcccgtgtag ttgatcaacc ggaccatgcc ccgggacccg
     5101 agttcccccg gcgacggtgc atgtcacatg gccgtaacga cgcctgcggc ataacgttcc
     5161 ggcatcgcta caatgcttga ccgggcctgc ggttgcaggc acgcactcgg gtatcgagta
     5221 ccggatgtca cagacatgaa ccgttccgct aaagcaacga tttttcacaa cccgatgtgc
     5281 ggcacgtcca ggaagaccct cgacatcctt cgcgaggccg gccgcgacgt gtggatccgc
     5341 gaatatctca aggatccgcc cacccgcgac gagctgaagg cgatgtatga ccgggcgggg
     5401 atcactccgc gccaggggct ccgggcaaaa gagccgctcg ccgccgagct cggcctcacc
     5461 gcgccggacg tcgacgaaga caccatattg gatgcgatga tcgagcaccc gatcctgatc
     5521 gagcgcccgc tggtcgagac cgacaagggc gtccggctgt gccggccgca ggacaccgtc
     5581 cgcgaaatcc tctagttccg cgcgggtgac cgcgctcgat ccccggctcc ttctccaggg
     5641 ctatgccatc ggaatcttcc cgatggccga cagccgcgat gccgaggatg tcttctgggt
     5701 cgagccgcgc gagcgggcga tcattccaac cggcggcttc catctgtcgc gctccctcgc
     5761 ccgggtcctt cgctcgggcc gcttcacggt ctcgctcgac caggatttcg cccaggttat
     5821 cgctgcctgc gccgaccgcg acgaaacctg gatcaacccg ggcatcgagc gggcgatgct
     5881 tgcgctccat cgcctcggcc acgcccattc gatcgaggtg tgggacggcg acggctcctc
     5941 cagcgatctc gtcggcggag tttatggagt gaagcttggc cgcgccttct tcggagagag
     6001 catgttcagc cgcaggaccg acacgtcgaa ggtcgccctc tcctggctcg cggcgcggct
     6061 caaggctggc ggctacagct ttctcgactg ccagttcatg accggccacc tcgcctcgct
     6121 cggggcggtg gcggtgtcgc gcgaaaccta ttcggaaatg ttggctgcag cgctcggcgg
     6181 cggggccgac ggttggactg cgcttggcga cggtgccgct ggttcggccg cgggcgcttc
     6241 ggagggctgc ccggactcgc gaggcggcga attctgggcg ctcgaccggc tacttgaagc
     6301 ggccggcgcg gagggcggcg gtggccccgc cgggaaggtc atcgcgcagc tcttgggcca
     6361 gacgtcgtag accgggtgct cgacgacgtt cagcgacggc gattccttgt aaatccagcc
     6421 ggagaaggcc cgccgccact gctcgtcgct gcccagcacg tcgagttgga ggaaggcgcc
     6481 ggtcagcttt tcgctctccc atggcgccgt cgtctcgcag gcgcgcagcc ggacgatcgc
     6541 gtccttcatc ctgatcgcct ggcccggctt catcgtcagg ttgcggacga tcccgttgcg
     6601 cttgttgagc aggccgatca ccgcgaccct ttccgccatt ggcgtgaccc cggcctcggt
     6661 gccttgaagc acctggccgg ccttcgtggt cgggccggcc tcctgcccgg caggcttctg
     6721 gtcgggcccg cacgccgcca gggcgatcgc aagcgcgact gtataggccg cctgtgggcg
     6781 cattccgcct attccggttt ccagggctgg tagtcgccgg tcgaggcggg ccggactttg
     6841 ttggagccga gcgcgccgtc ggggcggaaa gccgccatcg tcccggtcgc gttcggaacg
     6901 ggcgtcttct gccactcgcg tgccggcgga agcgagtctt cgggaaggcc gtcgatcgtg
     6961 cccctcagcc acagcgccca gccgggcggc acccggctcc cgtcattgtc ggcgggatag
     7021 acgacccagc gtctcgatgg gtccttcttg gactggtaat agacattgcc gcgatcgtcg
     7081 cggccgactt catcgccgaa gcgccaggtg aacagcttcg tcccccacgt gtccccggac
     7141 caccaggtaa aggttctcga ccaaaatccc atggcgcagg cctctgcccg gtcgcaatcc
     7201 gcagcgcaag ctcagcgaga ccaattcacc ttgtcacccg ggcggatccc cagctccgcc
     7261 gcccgcccgc cggcgatctc aaggacattc aggaccggct cgcccgaggg aagcggggtg
     7321 tcgtcgagcg gcctcgccgt ggtgatccgg gcgatcgttc cgtcggcgcg gatgtagatg
     7381 atgtcgagcg gtatcagcgt gttgtgcatc cagaaagcga cctgctgcgg tgtcgcatag
     7441 gggaagatca ttccacggtc gggcgcgagc gacttcacgt acatcagccc ccgctgctgc
     7501 tccgccggag tggccgccac gtcgaccgtg aagcgatgag cgccgtttgc cgaggtgatc
     7561 gtcagcggca cctggcgaag tcccgtctgc gcctcctcgc ctaacggctc cgccggcgcg
     7621 acgttggggc tgcaggccac cagcgtcgcg gcaaccgcaa tcgccacggg cttcacgaaa
     7681 tctgccggac ttcgaccgcg gttaggcctt tgcggccttc ggcgacccgc gcctcgacaa
     7741 tctgcccctg ctgaagctcg cctgcaccgc aactacgcac tgtttccatg tggacgaaaa
     7801 tatcctcgcc gtcgattccc ggccggttga ggaagccata gcccttggcg cggttgaacc
     7861 atttcacctc gacagtctcg aagtcaccgg ccgagtcgac aagcacgccg cgatccgcgc
     7921 ggctcgcggc aggaacggcc tggcgcgttg gaacgatgga ttcgctggtg tcgatcgaaa
     7981 tcacgcgctt cgcctggagc cctcgttcga ggcgggtcgg gacgcactcc acaagtgccc
     8041 cttccggaag gcttcgccga ccgtgctcct tgaggacgct gaagtggatc aggatgtcgc
     8101 cgtcgacgtc gtcgctgacc aggaagccga atccgcgggt cgcatcgaac cacttcactc
     8161 gcgccgaaac gacggcgcca tcgtcgtccg ccgaaacgac ggctgcgtcg gcgtccgccg
     8221 gaacggccgc gggttcgctg tccgacggaa cggctacggg ctcgactttc gccgagtcgg
     8281 gtgcgaccga ttcggtgctg acgtgctccg gctgtggttg gcttatccga gccacgcaaa
     8341 cccttacgaa ctaactaaag ttatgtcggc aatccgactc tacagcccca cctaaccctt
     8401 ttctttaagg aattcgacat cgatgttgct tcctggctcg atcgacagga tcgctttcgc
     8461 cagcgcgaag ctgtggccgg cgcggatcat cgccgccagc acgcgctccc ggtccgaccg
     8521 gtcgcctccg ccgttgccgt acgggccgat ccgccgtcgc cgggcgaagc gaagcgcgga
     8581 ctcgaccgct tcggaatcgg ctgccgcggc ggcttccatg ccgtcttcct caccgattcc
     8641 cgccgcccga agcgactggc ggacccgccg ggcgccatag ccgctcccgg tcagagcccg
     8701 cgattttgac agcgcgtagg cggcgtcgtc gacatagccg aggtcaacga gccgctcgac
     8761 gatcgtgtcg atatccgccg gccgctcggc ttcccagccg cgttcccgga gcttgcgcgc
     8821 caggtaggat gcaagcttgg cccgggtcgt cgcgaagcgg ccgacatagg aaagcgcaag
     8881 ctcgctcagc ttgtcctggt cgagcggcgg tcgcggtcgt ctgtcggtcc ggcgagccat
     8941 tgcgcccttt ttgtgccacc tttccgaacc atcaggaagg gccggcgagg ggtgagcgcc
     9001 ggcttggctc aactgttcgt aggaaatcgc gtgccggact ccaattcgac cgatcgtgcc
     9061 ggcttggccc cggagggcgc aacgccgacc gtcgacgatc ttccgcggcg catcgccgac
     9121 ttcgacaccc tcgccgaagc gctcgattac gcggctctcg ggcgcaaggg catgaatttc
     9181 cacgacgctc gcggcacttt ggtccgcgcc tacccttatt ccgagcttcg cgaggatgcc
     9241 atcgccaacg cgcgccgctt cgtcgggctc ggaatcaagc cgggcgaaag gatcgcgatc
     9301 accgccgaaa ccgggcccga gttcgccgcc gccttcttcg gagcggtcta tgccggagcc
     9361 tggcctgtcc cgcttccgct tccgaccagc ttcggcgggc gccagggtta tgtggaccag
     9421 ctcaaggtcc agcttcagag ctgcgacccg tcgctgttca tcgtcccgtc cgcgcttgcg
     9481 gagatttcgg ccgaggccgc cggccatgtc cccgttcgcg cctgggaaag cctgccggag
     9541 ctcgaggaga gcgacgccga cctgcctgcg gcggaccctg acgcgatcgc ctatcttcaa
     9601 tattcgagcg gctcgacccg cttcccccac ggcgttgcga tcacccaccg cgcgcttctc
     9661 gacaacctgc gtgcgcacgg catcggcctc gacatgcagc cgaccgaccg ctgcgtctcc
     9721 tggctgccat ggtaccacga catgggcctc gtgggctgca tgctgagcct tgtcgcgaac
     9781 cagctgtcgg tggattacct gaagaccgag gatttcgccc gaaggccgct cgcctggctc
     9841 gacctgatca cccgcaatcc gggaatctcc gtctcttatt cgccgacctt cggctacgac
     9901 atctgcgccc gccggatgag ctcgcagacc cgcgccgagg accgtttcga cctgtctcgc
     9961 tggcggatcg cgggcaacgg cgccgacatg atccgcccag acgtgatgca ggccttcgtc
    10021 gacgccttcg caagcgcggg cttcgacgct tccgctttct gccccagtta cggcctcgcc
    10081 gaggcgacgc tcgccgtctc actgatgccg ccgggcgagg gaatccgtat cgagctggtg
    10141 gaggaaaacg agctgtcggg cggcgagtcc gccgaagaag gccgcccgcg ccgctaccgc
    10201 gccgtggtca attgcggcaa gccggtccag ggcatggagg tcgaggttcg cgggcccgac
    10261 ggcgaagtgc tccccgaccg cgggatcggc cgaatcttcg tccgcggcgg cgccgtcatg
    10321 gtcggctatt tccgcgatca ggaatcgacc gacgcctgcc tgtcgtcgga cggttggctc
    10381 gacaccggcg acatgggcta catgtcgcgc ggctacatat tcatcgtcgg ccgcgccaag
    10441 gacatgatca tcatcaacgg ccgcaattac tggccgcagg acatcgagtg ggcggtcgag
    10501 cagctgcccg gcttcaagtc cggcgacatc gccgccttcg cgatcaccgg cccctccggc
    10561 gaagagactc cggccgtcct cgtccattgc cgggtgtccg acccgcacga acgcggccga
    10621 ttgcgcgacg acatccgcga acgggtgcac gcgatcaccg gaatcagcgc catcgtcgag
    10681 cttgtcccgc cgcgcacgct gccgcgcacc agctcgggca agctgtcgcg gaccaaggcg
    10741 cgctctctct acctctccgg cgagatccag ccctacgaca ttgccgccta ggaacagcgc
    10801 tccggctcgt gcgcttgtgc ggccgtgaac agcctcgacc agaccgcgac cggaatcgac
    10861 gaaacgacga tcacgctcgg cctccagctg gccgtgaccg ccggcttcgc ggtcgccatg
    10921 gtcgtccttc acacgctggg cctcgtcgcc atttcgcggc tgttgaggct caaggaagaa
    10981 cggctcctca agcacgaatt caaccttggc gcagtcggcc tcctcgccag cttcgggttc
    11041 ttggtgcttc tcctccacat gctcgagatc gcggtgttcg ggatcttcta catgctggtg
    11101 tcgagcatgg acctcgaaga ggcgcttttc tattcggcct cggcctatgc gactctcggc
    11161 tggacggccg attatttccc cgacagctgg cggctcatcg gcgcggtcga ggcgctgatc
    11221 ggcttcatcc tcatcggctg gtcgacggcc ttcatggtca ccaccatgcg caagctctc
//
LOCUS       DATAKH010000220         6761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_29747,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000220 DATAKH010000000
VERSION     DATAKH010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6761
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29747"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VHN55_09140"
     CDS             complement(<1..737)
                     /locus_tag="VHN55_09140"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007714350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX2804126.1"
                     /translation="MHRGTEFLGCDVAIMGGAMSWVSERNLVSAISNAGGFGVIACGA
                     MGPELLDTEIAETKARTERPFGVNLITMHPQLSELIDTCVKHDVGHVVLAGGLPPGWA
                     IDKIKASGAKLMAFAPALALAKKLMRSNVDALVIEGMEAGGHIGPVSTSVLAQEILPH
                     VCHDIPVFIAGGIGRGEAIAAYLEMGAVGVQIGTRLVCAHESIAHPNFKKAFIRASAR
                     DAVLSVQIDPRLPVIPVRALKNREMEN"
     gene            complement(809..2041)
                     /locus_tag="VHN55_09145"
     CDS             complement(809..2041)
                     /locus_tag="VHN55_09145"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010405089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEX2804127.1"
                     /translation="MPRIVMKFGGTSMAGIERIRHVAERVRREAEAGNEVLVVVSAMA
                     GETDRLVQLCREAAALHDPKEYDVVVASGEQVTAGLLAMTLQNMGLKARSFMGWQLVK
                     ASGVHGNARVDAIEGAMLGEALSGGTVAVIPGFQGVSGEGRLTTLGRGGSDTSAVAIA
                     AGVKADRCDIYTDVDGVYTTDPRIVPKARKLDAITFEEMLELAGVGAKVLQPRSVGLA
                     MRENLPLRVLSAFEDVPGTRVVAELSGADMERNEIAGIAADRNEARVTLTKIADMPGT
                     VASVITPLAEAGIAVDMIVHAATRTGEASDLTFTVPRASLAQAQSVIESVRDAAGYDE
                     LLTDDNVAKVSIVGVGVRSNPQLAAKMFETLAERRINLLAISTSEIKVSALVAESELE
                     LAVRVLHTAFGLDSEAAA"
     gene            2095..2823
                     /gene="ubiG"
                     /locus_tag="VHN55_09150"
     CDS             2095..2823
                     /gene="ubiG"
                     /locus_tag="VHN55_09150"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007714348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEX2804128.1"
                     /translation="MAETSSSIVADEVERFAALAGDWWDPAGASAMLHKLNPVRLAYI
                     RDQVDQHWQCDEQGFKPLQGKRALDVGCGAGLLAEPLARLGAEVTAIDAAAELVAAAQ
                     LHAHGQGLKVDYRVAAVEDIDGAFDLVTSLEVIEHVADPEAFVAALAARLAPGGLLIL
                     STPNRTAWSRLLMVGFAEATGAIPKGTHDFDKFIAPERMKAILAECGLQCIDVEGIAW
                     TPTRGLHLSEDLRLNYLVTATNRA"
     gene            2858..4186
                     /locus_tag="VHN55_09155"
     CDS             2858..4186
                     /locus_tag="VHN55_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019370282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pectate lyase"
                     /protein_id="HEX2804129.1"
                     /translation="MAQLAGLLFALASCSKAEAQLPAFPGAEGAGAFSVGGRGGRAIH
                     VSNLDDSGPGSLRAATDAEGPRTIVFDVGGTVRLKRPLWIRNGRVTIAGQTAPGGGIT
                     LRGGSLRVAADDVIIRFIRSRLGDKSGADDDSISVISGRRIILDHVSASWGTDETLSV
                     SPNWRRGDSLGDVTVQWSIIAESLCGPPAPGARHCYGTLVGAARGARISFHHNLWANH
                     AGRMPRPSNQLPPGQDKLGGFVEFRSNVVYNWGGQQAGYDSGPPATLHLSFIDNSYWT
                     GPESKGSLIYENRNPFARGWFAGNALNGKLLADQWSHVLSRTPGFRLSRPIAVTPVAA
                     DQAASAYRRVLAHAGASLVRDTVDRRVVETVRSRTGGLVPSQDAIGGWPELARGSPWR
                     DRDRDGMPDDWESRHGLDSSDPSDGTRDRDRDGYTNLEEWLNSLAAPTAG"
     gene            4337..4546
                     /locus_tag="VHN55_09160"
     CDS             4337..4546
                     /locus_tag="VHN55_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804130.1"
                     /translation="MADPDDRDTERTTIVETGGGGGGGGVLAVVLLIIVVLVLLWVFR
                     AQLGLTDGGTTVEVPDTIDVNVNQQ"
     gene            4692..5969
                     /gene="hmgA"
                     /locus_tag="VHN55_09165"
     CDS             4692..5969
                     /gene="hmgA"
                     /locus_tag="VHN55_09165"
                     /EC_number="1.13.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004411 - homogentisate 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEX2804131.1"
                     /translation="MRLHYMSGFGGHFESEAAEGALPKGRNSPQKPAFGLYAEQLSGS
                     AFTMPRHENRRSWLYRMRPTADHRPFTPYEGAPLFGDPAAKEPLPPNRLRWDPPTDLP
                     EDKDFVDGLVTMLHAREPEALEGCAVHLYRADRSMERIFADSDGELLIIPQAGGLRIE
                     TELGRLDVAPGWVALVPRGMKFRVAVEDGGSRGYVAENYGLPFRLPDLGPIGSNGLAN
                     PRDFESPVAWFEDKDERTEVVQKSLGQLWTTTLDHSPLDVVAWHGNYAPWRYELSRFN
                     TIGTVSFDHPDPSIFTVLTSPSEVPGRANADFVIFPPRWMVAEDTFRPPWFHRNVMSE
                     AMGLIAGEYDAKAEGFAPGGLSLHNVMSGHGPDLESWQSATQADLKPAKIEGTMAFML
                     ETCWPYRPTRFALDRAQPDYDQAWAGFPKAKLP"
     gene            5966..>6761
                     /locus_tag="VHN55_09170"
     CDS             5966..>6761
                     /locus_tag="VHN55_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX2804132.1"
                     /translation="MSGIDDTHDPDLASWVSSAAAGSDFPVQNLPLGIFSEAKGRRRP
                     GVAIGDYILDLNAIADLLDEDWRGDLAQPVLNGWLARGPEAHRGLRRRLSELLTDERY
                     RDDIDPHLIGQSEVRMHVPCLVGDYTDFYVGIHHATNVGKQFRPDNPLLPNYKYVPIG
                     YHGRASSVRASGEEVTRPSGQRKPPDADVPEYGPSRRLDYELELGMWIGRGNRLGEPI
                     PINQADDHIAGWCLLNDWSARDIQAWEYQPLGPFLAKSFLTSVSPWI"
BASE COUNT         1144 a         2247 c         2223 g         1147 t
ORIGIN      
        1 aaattctcca tctcgcggtt cttcagggcg cgcacaggta tcaccggaag cctggggtcg
       61 atctgcaccg agagcaccgc gtcgcgagcg gatgcgcgga tgaaggcctt cttgaaattc
      121 ggatgagcga tgctctcgtg agcgcagacg aggcgggtgc cgatctggac cccgaccgcg
      181 cccatctcga ggtaagcggc aatcgcttcg ccgcggccga tcccgcccgc gatgaacacc
      241 gggatgtcgt ggcagacgtg gggaagtatc tcctgcgcca gaacggacgt cgaaaccggg
      301 ccgatatggc cgccggcctc catgccttcg atcaccaggg catcgacgtt cgagcgcatc
      361 agctttttcg cgagcgcaag cgcgggagcg aaggccataa gcttggcgcc gctcgccttg
      421 atcttgtcga tggcccagcc ggggggaagc ccgccagcga gcacgacatg gccgacatcg
      481 tgcttcacgc acgtgtcgat cagctccgaa agctgcgggt gcatggtgat caggttgacg
      541 ccgaacggac gctcggttcg cgccttggtc tcggcgatct cggtgtcgag cagctccgga
      601 cccatcgccc cgcaggcgat cactccgaat ccgccggcgt tggagattgc ggaaacgagg
      661 ttgcgctcgg agacccagct cattgccccg cccatgattg cgacgtcgca accgagaaac
      721 tcggtgccgc ggtgcatcag ctcgttgagg cgcgcgtggc ctgcaccggg atgaactgcg
      781 cgcggctcgg ggattagccc ttcgccgctc acgccgccgc ctccgaatcg aggccgaaag
      841 ccgtgtggag gacgcgcacc gccagttcga gctcgctttc ggcgaccagc gcgctgacct
      901 tgatctcgga agtcgagatc gcgagcaggt tgattcgacg ctcggcaagt gtctcgaaca
      961 tcttcgctgc aagctgcggg ttcgagcgaa ctccgactcc gacgatgctg accttcgcga
     1021 cgttatcgtc ggtcaggagc tcatcgtagc cggccgcatc cctgacgctc tcgattaccg
     1081 actgcgcctg cgccagactt gctcgaggga cggtgaaggt gaggtcgctc gcctctcccg
     1141 tccgcgtggc ggcgtggacg atcatgtcga cagctatgcc ggcctcggca agcggcgtga
     1201 tcaccgaagc gacggtaccg ggcatgtcgg caatcttcgt cagggtgacc cgcgcctcgt
     1261 tgcggtcggc ggcgatccct gcgatttcat tcctctccat atccgctcct gaaagctcgg
     1321 caaccactcg cgttcccggc acgtcctcaa aggccgagag cactcgaagc ggcaagtttt
     1381 cgcgcatcgc gagccccacc gagcgcggct gaagcacctt cgcgcccacg cctgcaagct
     1441 cgagcatctc ctcgaacgtg atcgcatcca gcttgcgcgc cttcggaacg atccgcggat
     1501 cggtcgtgta gacgccgtcg acatcggtat agatatcgca gcggtcggcc ttgacccctg
     1561 ctgcgatcgc gacggcactg gtgtcggagc cgcctcggcc cagcgtcgtc agccgccctt
     1621 cgcccgacac gccctggaat ccgggaatga ccgcaacggt cccgcctgac agcgcctcgc
     1681 cgagcatcgc cccttcgatc gcatccacgc gcgcatttcc gtgcactccc gacgccttga
     1741 ccagctgcca gcccatgaag cttcgcgcct tcagccccat gttctggagg gtcatcgcca
     1801 ggagcccggc ggtgacctgt tcgcccgagg cgaccaccac gtcatattcc ttcgggtcgt
     1861 gcagcgccgc cgcttcgcgg caaagctgca ccaaccggtc ggtttcgcca gccatcgccg
     1921 agacgacgac cagcacttcg ttgccggcct ccgcctcgcg ccggacccgc tccgcgacgt
     1981 gccggattcg ctcgatcccg gccatcgacg tgccgccgaa cttcatcact atacggggca
     2041 tgtggagggg cttcactcct tgggctaacc ggcgcgccct gttaggaggc ggccatggcc
     2101 gaaacaagtt ccagcattgt tgccgacgag gtcgagcggt tcgcggcgct ggcgggcgac
     2161 tggtgggacc cggccggcgc gtcggcgatg cttcacaagc tcaatcccgt ccgcctcgcc
     2221 tatattcgtg accaggtcga ccagcattgg caatgcgacg agcagggctt caagccgctg
     2281 caggggaagc gggcgcttga tgtcggctgc ggagcggggc tgcttgcgga gccgctggcg
     2341 aggctgggcg cagaggtcac cgcgatcgac gctgcggctg agcttgttgc agcagcgcag
     2401 cttcacgctc acggccaggg cctcaaagtg gattacaggg tcgccgcggt cgaggacatc
     2461 gacggcgcgt tcgatctcgt aacgtccctc gaggtgatcg agcacgtcgc cgatccggag
     2521 gcttttgtcg cggcgctcgc ggcgcggctt gcgccgggcg ggctactgat cctgtcgacc
     2581 ccgaaccgca ccgcctggtc gcggctgctg atggtcggct tcgccgaggc gacgggcgcg
     2641 atccccaagg gcacgcacga tttcgacaag ttcatcgctc cggagcgaat gaaggcgatt
     2701 ctggccgaat gcgggctcca gtgcatcgac gtcgagggaa tcgcctggac gccgactcga
     2761 gggctccatc tcagcgagga cttgcggctg aactacctgg ttacggcaac caaccgcgcc
     2821 tgatcacatt gaaaggccaa tgacgacacg gttgccgatg gctcagctcg cgggattgct
     2881 cttcgcgctc gcgtcctgct cgaaggccga ggcgcagctg ccggccttcc caggcgcgga
     2941 gggcgctggc gccttcagcg tcgggggccg cggcggccgc gcaatccacg tctccaacct
     3001 cgacgacagc ggcccgggat cgcttcgggc ggcgaccgac gccgaggggc cgcgaacgat
     3061 cgtcttcgat gtcggcggga ccgtccggct caagcgcccg ctgtggatcc gcaacggccg
     3121 ggtgacgatc gccggccaga ccgctccggg cggcgggatc acgcttcgcg gcggcagctt
     3181 gagggtcgcc gccgacgacg tcatcatccg cttcatccgc tcgcggctgg gcgacaagag
     3241 cggtgccgac gacgattcga tctcagtgat cagcggccgc cggatcatcc tcgaccatgt
     3301 ttccgcgagc tggggcaccg acgagaccct gtcggtcagc cccaactgga gacgcggcga
     3361 ttcgcttggc gacgtgacgg tgcaatggtc gatcattgcg gagtctttgt gcggcccgcc
     3421 ggcgcccggc gcccgccact gttatggcac gttggttggc gccgcccgcg gcgcacggat
     3481 cagcttccac cacaacctgt gggcgaacca cgccgggcgg atgccgcgcc cgtccaacca
     3541 gcttccgccc ggtcaggaca agttgggcgg gttcgtcgag ttccggtcga acgtcgtcta
     3601 caattggggg gggcagcagg ctgggtatga cagcggcccg ccggcaacct tgcacctgag
     3661 cttcatcgac aacagctact ggactggccc ggagtcaaaa ggctcgctga tttatgagaa
     3721 ccgcaacccg ttcgcccgcg gctggtttgc gggcaacgcc cttaacggca agctgctcgc
     3781 cgaccagtgg agccacgtgc tgagcaggac tccgggattc cggctgtcgc ggccgatcgc
     3841 ggttacgccg gtggcagctg accaagctgc ttccgcatat cgccgagtgc tcgcccacgc
     3901 cggggcgtcg ctggtgcgcg atacggtcga ccggcgcgta gtcgagacgg tcaggtcgag
     3961 aaccggcggg ctcgtcccaa gccaggacgc tatcggcggc tggccggagc ttgcgcgcgg
     4021 aagtccatgg cgcgaccggg accgtgacgg aatgccggac gactgggaaa gccggcacgg
     4081 cctcgactct tcggacccga gcgacggcac ccgcgaccgt gaccgggacg gctataccaa
     4141 tcttgaggaa tggctgaatt ccctcgctgc tcccaccgcc ggctgaaaag aagcggcaca
     4201 gaaggttggg tgcgaatcgt ttcggtgagc gccctatgcg ggaaggttca aagcgggccc
     4261 gttcggcgcg ggtggaaccg cgccgaaacg cgttcgttcg tttcgcaacc taaacaggcc
     4321 aacagggagg ttccacatgg cggatcccga tgatcgagat accgagcgaa cgaccatagt
     4381 cgaaaccggc ggaggcggag gcggcggagg agtcctcgcg gtcgtcctcc tcatcatcgt
     4441 cgtgctggtg cttctctggg tgttccgcgc ccagcttggg ctgaccgacg gcggaaccac
     4501 cgtcgaggtt cccgatacga tcgacgtaaa cgtcaaccag cagtgaattt ccggcgcgag
     4561 cgggcggcca ggtctggccg ctcccgccac tctcacgcgc ggtaggcgag tcccgcgcgt
     4621 gacgggcgca gttcctcatc cgggagctgc gcccgtttga gtttgtgccg cttagacagt
     4681 aaccggcgcg catgaggctt cactacatga gcggcttcgg aggccatttc gaaagcgaag
     4741 cggccgaagg cgcgctcccc aaaggccgca attcgccgca gaagccggcg ttcggcctct
     4801 acgcggagca gctctcggga agcgctttca cgatgccgcg gcacgagaac cggcgcagct
     4861 ggctgtaccg gatgcggccg actgctgacc atcgtccgtt cacgccatat gagggcgccc
     4921 cgctgttcgg cgatcccgca gccaaggagc cgctgccgcc caaccggctt cgctgggacc
     4981 cgccgacgga cctcccggag gacaaggact tcgtcgacgg gctggtgacg atgctccacg
     5041 cgcgcgagcc agaggcgctc gagggctgcg cagtccattt ataccgcgcc gaccggtcaa
     5101 tggagcggat ttttgccgat tctgacgggg agctgctgat cattccgcag gcgggtggcc
     5161 tcaggatcga gaccgagttg gggcggctgg acgtcgctcc gggttgggtg gcgctggtcc
     5221 cgcgcgggat gaagttccgc gttgccgtcg aagatggcgg ctcgcgcggc tatgtcgcgg
     5281 agaattacgg ccttccgttc cggctgcccg accttgggcc gatcgggtcg aacgggctgg
     5341 ccaatccccg cgacttcgaa agtccggtcg cctggttcga ggacaaggac gagcggacgg
     5401 aagtggtcca gaaatcgctc gggcagctat ggaccacgac tctcgatcat tcgccgctcg
     5461 acgtcgtcgc ctggcacggc aattacgcac cgtggcgcta cgagctttcg cgattcaaca
     5521 cgatcggaac ggttagcttc gaccatcccg acccgtctat tttcacggtc ctgacttccc
     5581 cgagcgaagt gccgggccgg gccaacgccg acttcgtaat cttcccgccc cgctggatgg
     5641 ttgccgaaga cacattccgg ccgccgtggt ttcaccgtaa cgtgatgagc gaggcgatgg
     5701 gactgatcgc cggcgaatat gacgccaagg ccgaaggctt cgcccccggc ggcctcagcc
     5761 ttcacaacgt catgagcggg cacggccccg atctcgagag ctggcagagc gcgacgcagg
     5821 ccgacctgaa gcccgcgaag atcgaaggga ccatggcttt catgctagag acctgctggc
     5881 cctatcgccc gacccgcttc gcgctcgacc gggcgcaacc cgactatgac caggcctggg
     5941 ccgggttccc gaaggcgaag ctgccgtgag cggaattgac gacactcacg accccgatct
     6001 cgcgagctgg gttagcagtg ccgccgcggg aagcgatttt ccggtccaga acctgccgct
     6061 cggaattttt tccgaagcga agggcaggcg ccggccgggc gtcgcgattg gcgactacat
     6121 cctcgatttg aacgcgattg ccgaccttct ggacgaagat tggcgtggcg acctggcgca
     6181 gccggttctg aacggctggc tcgcgcgcgg tcccgaagct caccgggggc tccgccggcg
     6241 cctgtccgag cttctgaccg acgagcgcta ccgcgacgac atcgatccgc acctgatcgg
     6301 ccagagcgaa gtgcggatgc acgtgccgtg cctcgtcggc gattacaccg atttctatgt
     6361 cggaattcac cacgcgacca acgtcggcaa gcaatttcgc cccgacaatc cgctgcttcc
     6421 gaactacaaa tatgtgccga taggctatca cggcagggca agctcggtcc gcgcttcggg
     6481 agaggaggtc actcgtccga gcggccagcg caagccgccg gatgccgatg tgcccgaata
     6541 cggcccgagc cggcggctcg attacgagct cgagctgggc atgtggatcg ggcgcggcaa
     6601 caggcttggc gagcccatcc cgatcaacca ggcggacgac catatcgccg gctggtgcct
     6661 gcttaacgac tggtcggcgc gcgacataca ggcctgggag taccagccgc tcgggccgtt
     6721 cctggcgaag agtttcctca ccagcgtatc gccctggatt g
//
LOCUS       DATAKH010000221         4592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_13894,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000221 DATAKH010000000
VERSION     DATAKH010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4592
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13894"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1037
                     /gene="glmM"
                     /locus_tag="VHN55_09175"
     CDS             <1..1037
                     /gene="glmM"
                     /locus_tag="VHN55_09175"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX2804133.1"
                     /translation="ASHNPFHDNGIKLFGPDGYKLSDEDERAIERRLEKSPRLAKPEL
                     IGRAKRIDDARGRYVHHAKSTFPDRLRLDGLKVVIDCANGAAYHVAPDALWELGAEVV
                     AMGVTPNGLNINDGCGSTHPQAMCERVVAEGADIGLALDGDADRILVADEKGRLVDGD
                     QMMALIALDRRRREELKGDVVATVMSNLGLERRLADEGIGLVRTQVGDRYVLERMREL
                     GCNVGGEQSGHIILTDYSSTGDGLVAGLQVLAALVGSGKPASEVLRQFEPLPQLLKNV
                     RFNGGAPLDDKAVKKRIADAERALEGRGRLLIRKSGTEPLIRVMAEGDDPALVERVVD
                     DICEAVQAAA"
     gene            1122..2291
                     /gene="thiD"
                     /locus_tag="VHN55_09180"
     CDS             1122..2291
                     /gene="thiD"
                     /locus_tag="VHN55_09180"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEX2804134.1"
                     /translation="MTPTARILIIAGSDSGGGAGIQADIKTVTMIGGHAMTAITAITA
                     QNTLGVDAVHPVPAEMIIAQIDAVIGDIGVDAVKVGMVPGAFAAEAIAKRLEKLENVP
                     IVFDPVMVATSGAALADDATVAAFGKLMDVATLVTPNLPELGRLTSEEDPVAAALHLV
                     GEHGCAVLIKGGHDEGDALADALIEEDNMTSWQGQRIDTNNTHGTGCTLASAIATFLG
                     QGDTLSSAVDRARIFVRLALQDSPDLGQGAGPIAQGRVRLDVGAGPRLNQVTVTGTNY
                     RKSVEFYRTLGLKQIVDSPENGYARFETEGGGTLSVQIDPDEAISATTAVYLECDDLD
                     ERVERLARNGLAFEHGPRNQPWMWREARLHDPSGNIIFLYKAGEARRFPPWRVEE"
     gene            2360..2941
                     /locus_tag="VHN55_09185"
                     /pseudo
     CDS             2360..2941
                     /locus_tag="VHN55_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008600650.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
     gene            3187..4320
                     /locus_tag="VHN55_09190"
     CDS             3187..4320
                     /locus_tag="VHN55_09190"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009008 - DNA-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEX2804135.1"
                     /translation="MNLLARVPEPKARVRRPSAAKRELPLDTILQGNCIAEMARLPDK
                     CVDMIFADPPYNLQLGGDLFRPEGGRVDAVDDEWDKFDSLAAYDDFTREWLHEARRIL
                     KDDGTIWVIGSYHNIYRVGALLQDAEFWILNDIVWRKSNPMPNFRGTRFTNAHETLLW
                     CAKDENARYTFNYRAMKALNDDLQMRSDWVLPICSGSERVKGADGAKAHPTQKPEALL
                     YRILLACTKPGDIVLDPFFGTGTTGAVATRLGRRWVGIERERSYVKVALERIGSTLPL
                     DESAMATMAEQRTAPRVAFGLLVESGLCPPGTRLADAKGHYSASVRADGSIESGAHSG
                     SIHKVGAALQGAPSCNGWTFWHVKEGRALQPLDTLRQRHLSAL"
     gene            4336..>4592
                     /locus_tag="VHN55_09195"
     CDS             4336..>4592
                     /locus_tag="VHN55_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX2804136.1"
                     /translation="MLLRPTAFVDSPFGHDGQVARLAGGLNWFSAVELLEIRESRRVS
                     VELVSVQDLGTRLDDSLSAQWERLTSARPPLQLGDRTIRLD"
BASE COUNT          832 a         1523 c         1507 g          730 t
ORIGIN      
        1 ccgcctccca caatccgttt cacgacaacg ggatcaagct gttcgggcct gacggctaca
       61 agctcagcga cgaggatgag cgcgccatcg agcgccgcct ggagaaatcg cctcgccttg
      121 ccaagccgga gctgatcggc cgcgcaaagc ggatcgacga tgcgcgcggc cgctacgtcc
      181 accacgccaa gtcgaccttc ccggaccgcc tcaggctcga cgggctgaag gtggttatcg
      241 attgcgctaa cggcgccgcc taccacgtcg cccccgatgc gctgtgggag ctcggcgccg
      301 aggtggtcgc gatgggggtc acgcccaacg gcctcaacat caacgacggc tgcggatcga
      361 cccatccgca ggcgatgtgc gagcgagtcg tcgccgaggg cgccgacatc ggccttgcgc
      421 tcgacgggga cgccgaccgg atcctcgtcg ccgacgaaaa gggccgtctc gtcgacggcg
      481 accagatgat ggcgctgatt gcgctcgacc ggcgccggcg cgaggaactc aagggcgacg
      541 tcgtcgcgac cgtcatgtcg aacctgggcc tcgagcgccg actcgccgac gagggcatcg
      601 gcctggtccg aacccaggtc ggcgaccgct atgtgctcga aaggatgcgg gagcttggct
      661 gcaatgtcgg cggcgagcag tcggggcaca tcatcctgac cgattattcg agcaccggcg
      721 acggcctcgt cgccgggctc caggtgctcg ccgcgctggt cggcagcggc aagcccgcga
      781 gcgaggtgct ccgccagttc gagccgcttc cgcagctcct gaagaacgtc cgcttcaacg
      841 gcggcgcgcc gctcgacgac aaagcggtga agaagcgcat cgccgacgcg gagcgcgcgc
      901 tcgaaggccg cggacgcctg ctgatccgca aatcggggac cgagccgctc atccgggtca
      961 tggccgaagg agacgacccg gcgcttgtcg aaagggtcgt ggacgacatc tgcgaggccg
     1021 tccaggcggc ggcgtgaacg ctttgttggc atttggggcg taccagcgcc cccgtgcaca
     1081 tggaaaactt cgccccaagg gccgggtcga aggcgagtag agtgacgccg acggcgcgaa
     1141 tcctgatcat cgcaggctcc gattccgggg gcggggcggg cattcaggcc gacatcaaga
     1201 ccgtcacgat gatcggcggc catgcgatga ccgccatcac cgccatcacc gcgcaaaaca
     1261 cgctcggggt cgatgccgtt cacccggttc cggccgaaat gatcatcgcc cagatcgatg
     1321 ccgtcatcgg cgacatcggc gttgatgccg tgaaggtcgg gatggtgccc ggagcattcg
     1381 cggcagaagc gatcgccaaa cgcctcgaaa agctcgagaa tgtgccgatc gtcttcgatc
     1441 ctgtgatggt cgcgaccagc ggcgcggcgc tcgccgacga cgccacggtc gcagcgttcg
     1501 gcaagctgat ggacgtcgct accctggtca ctcccaacct gccggagctt ggccgcctaa
     1561 ccagcgagga ggatccggtc gcagccgcac tccacctggt cggggaacat ggctgcgcgg
     1621 ttctgatcaa gggcggccac gacgagggcg acgcgcttgc cgacgcgctc atcgaagaag
     1681 acaatatgac cagctggcag ggccagcgga tcgataccaa caacacccac ggaaccggct
     1741 gcacgcttgc cagcgcgatc gcgaccttcc tcggccaggg cgacacgctt agctcggccg
     1801 tggacagggc gcgcattttc gtccgccttg ctctccagga ttcgccggac ctggggcagg
     1861 gcgccgggcc gattgcccag ggacgagtcc gcctcgatgt cggcgccggg ccgaggctca
     1921 atcaggtcac cgtcaccggc accaactacc gcaagtcggt cgaattctac cgcaccctcg
     1981 gcctaaagca gatcgtcgac agcccggaga acggctatgc gcgcttcgaa accgagggcg
     2041 ggggcacttt gtccgtgcag atagacccgg acgaggcgat ttccgcgacg accgcggtct
     2101 atctcgaatg cgacgacctc gacgagcggg tcgagcggct tgcgcgaaat ggcctcgcct
     2161 tcgagcatgg cccccgcaac cagccgtgga tgtggcgcga agcgcgcctc cacgacccgt
     2221 ccggcaacat catcttcctc tacaaggccg gcgaagcgcg ccgcttcccg ccctggcgag
     2281 tggaagaata gacttttcca caacataggc cgcgcgccgt ctggacgcgc gccggtcggc
     2341 aagtccacaa ggcgactcga tgccgcgccg ttgttcgttc aagctcgaga tcgggtttcc
     2401 ccagccgctg gcgggcgtcg acgaagcggg ctgcgcccct cttgccggcc cggtggttgc
     2461 ggcggcggtc atcctcgacc gcgacaaata tccgcggggg atcgacgatt cgaagaacct
     2521 gccgctcgaa aagcgagagg cgctctacac gcgtctggtc aagtgcgccg cctggggcgt
     2581 cggcgtggca agcgtcgagg aaatcgacaa gatcaacatc tactgggcgc ggatgctggc
     2641 gatgactcgc gcggtcgaag cgctcggaat cgagccggcc tgggtgctgg tcgacggcaa
     2701 tgcctgcccg cgctgggagc gaccgtccaa ggcgatcgtc gacggcgacg ccaagtgccg
     2761 ctcgatcgcc gccgcctcga tcatcgccaa ggtcacccga gaccggatga tggcggagtg
     2821 ggcgagcgaa tatcctggct acgggtggga gacgaaccgc ggctacggca cgcccgaaca
     2881 ttatcgcggc ctgcaggcgc tcggcctaac tccgcttcac cgaaggagct ttgccccgat
     2941 ccgcgcgatc gagctcggcc atgcacagcc agagctggag atcatcgaaa agcagcggcc
     3001 cgagtccttt gcgccacaca cactagcggt tgagtccgcc gactccgaac agactcaaca
     3061 tcttgtggtc cggtcgcgat ccgccgcata gcgttagcga cttccgcacc gccgttaacc
     3121 tctgaaatgt tgaccgcgag tccggcctga ctcaccttcg ccgtcttgtc agggggcgta
     3181 gttcacatga atctgcttgc tcgagttccc gagccgaagg cgcgagtccg ccggccatcc
     3241 gcggccaaac gcgagttgcc gctcgacacc atcctccagg gcaactgcat cgccgaaatg
     3301 gcgcggcttc cagacaagtg cgtcgacatg atttttgccg acccgccgta caatctgcag
     3361 ctcggcggcg acctgttccg gccggagggc gggcgggtcg atgccgtgga tgacgaatgg
     3421 gacaagttcg acagtctcgc cgcctacgac gatttcaccc gggagtggct ccacgaggcg
     3481 cggcgaatcc tcaaggacga cggcaccatc tgggtgatcg gcagctatca caacatctac
     3541 cgcgtcggcg cgcttctgca ggacgccgaa ttctggattt tgaacgacat cgtgtggcgc
     3601 aagtcgaacc cgatgccgaa cttccgaggc actcgcttta cgaatgcgca cgagaccttg
     3661 ctgtggtgcg cgaaggacga gaatgcgcgc tacaccttca attatcgcgc catgaaggcg
     3721 ctcaacgacg acctccagat gcgctcggat tgggtgctgc cgatttgcag cgggtcggag
     3781 cgggtgaagg gagcggatgg tgcgaaggcg cacccgaccc agaagcccga agccttgctc
     3841 taccggatat tgctcgcatg cacgaaaccg ggcgatatcg tcctggatcc gttcttcggc
     3901 accggcacca cgggcgctgt cgccacccgc cttggccgcc gctgggtcgg aatcgagcgc
     3961 gagcggtcct acgtgaaggt cgcgctggag cggatcggct ccactctccc gctcgacgag
     4021 agcgcaatgg cgaccatggc cgagcagcgg actgcgccgc gagtcgcctt cgggcttctc
     4081 gtcgaaagtg gcctgtgccc gccggggacc cggctcgctg atgccaaggg gcactattca
     4141 gcgagcgtgc gcgcagacgg ctcgatcgaa tcgggggcgc acagcggctc gatccacaag
     4201 gtgggggcgg cccttcaagg cgcgccgtcg tgcaatggct ggacattctg gcacgtgaag
     4261 gagggacggg cgctgcagcc gctcgacaca ttgcgccaac ggcacctctc cgcgctatag
     4321 cgcggcccca tgcgaatgct tctccgaccg accgctttcg tcgattcgcc gttcggccac
     4381 gacgggcagg tggctcgcct ggccggcggc ctcaactggt tctcggcggt cgagctcctt
     4441 gagattaggg aaagtaggcg agtgtcggtg gaactcgttt ccgtgcaaga tcttgggaca
     4501 aggcttgacg actctctctc agctcagtgg gagcggttga cgtccgctcg tccgccactc
     4561 cagctcggcg accggaccat ccgcctcgac ca
//
LOCUS       DATAKH010000222        15773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26662,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000222 DATAKH010000000
VERSION     DATAKH010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 15773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15773
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26662"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..369)
                     /locus_tag="VHN55_09200"
     CDS             complement(37..369)
                     /locus_tag="VHN55_09200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804137.1"
                     /translation="MSNRGIGRARMFVGGFLLFAAVIVWGTGILTSPHGETVAQGTEH
                     VRSVVVTYLRNSALATVFLAAVSAFLLFPARRPRAPRRDWAIGLLIAVLIATSLYQLL
                     WLQTAVVS"
     gene            complement(366..1328)
                     /gene="mltG"
                     /locus_tag="VHN55_09205"
     CDS             complement(366..1328)
                     /gene="mltG"
                     /locus_tag="VHN55_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEX2804138.1"
                     /translation="MKRLAWLAGFAVGGLVVVLWLLWWSPGPKPGPHTIIVAEGSTLA
                     SVANELETQGAIPGTATTFRAIAKLFGSSDPVQAGEFEIPKGMSASGILDLLQHGRPV
                     QRLITVTEGMPAIIVEEKLAAIPHLSGPLPAIEEGSILPDTYNYQRGETRAALLSRMQ
                     AAMAKALAALWPKRTGKCPVTTPQEAVTLASIVEKETGKPAERRTIAGVYCNRLRIGM
                     KLDADPTVIYPITKGKPLGRRIKRSELNSGNPYNTYRNAGLPPGPIANPGRDSIAAVL
                     NPAETEALYFVADGTGGHIFAKTLSEQQANVKRWYAIRRARGEM"
     gene            complement(1328..2587)
                     /gene="fabF"
                     /locus_tag="VHN55_09210"
     CDS             complement(1328..2587)
                     /gene="fabF"
                     /locus_tag="VHN55_09210"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEX2804139.1"
                     /translation="MRRVVVTGLGLVTPLGGDVETSWRNIVAGKSGAGAITRFDASDQ
                     KCRIACEVKPADHEYGFDAGKRVDHKTQRQVDPFIIYGIDAAGQAIEDAGLSEMDEAM
                     RLRAGVSIGSGIGGLPGIEKESVNLFENGPGRVSPHFVHGRLINLISGQVSIKYGLMG
                     PNHAVVTACSTGAHSIGDAARMIKDDDADIMLAGGAEATICPIGIAGFAQARALSTNF
                     NDQPEKASRPYDKDRDGFVMGEGAGVLVLEEYEHAKARGAKIYAEVVGYGLSGDAHHV
                     TAPHPEGSGAYRSMEMALRKSGLQPSDIDYINAHGTSTPLGDELELGAVRRLFGNAIA
                     SLSMSSTKSAIGHLLGGAGAVESIFCILAMRDQVVPPTLNLDNPSEGTEGVDLVPHKA
                     KERKVRAVLNNSFGFGGTNASLIMKAV"
     gene            complement(2695..2931)
                     /locus_tag="VHN55_09215"
     CDS             complement(2695..2931)
                     /locus_tag="VHN55_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003039428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX2804140.1"
                     /translation="MSDSADRVKKIVVEHLGVEPDKVTPEASFIDDLGADSLDIVELV
                     MAFEEEFNVEIPDDAAEKITTVKDATDYIDKNQG"
     gene            3028..3477
                     /locus_tag="VHN55_09220"
     CDS             3028..3477
                     /locus_tag="VHN55_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vgr related protein"
                     /protein_id="HEX2804141.1"
                     /translation="MHDSRSRSLTDGEIDLARSIFGDAVDYGRVRIIRRKWWPFHPRN
                     AAMAPRGNIHFHPAGDGWSEDFSKEPLSMQGFFIHEMTHVWQSQARGRFYLPLMRHPF
                     CLYRYELVPGRPFDRYGLEQQAEIVRHVFLAERGAKVTAPPRSLLPF"
     gene            3609..6236
                     /locus_tag="VHN55_09225"
     CDS             3609..6236
                     /locus_tag="VHN55_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013849583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2804142.1"
                     /translation="MRLSTKLLVGTAIAAMATPSLAQQTGDVGATQEEQVAQQANQSL
                     PAQEDEIVIVTATKHASTIQDVPFSVNAQTEADIQRANAQTLEDISRNVAGLTVQNLG
                     PGQSQVSVRGVSAGQIVRDQPGVKEQVGVYLDESVISLSLFTPDLDLFDLNRVETLRG
                     PQGTLFGSGSVGGTLRYITNQPALGITEGVVEANVNTVDEGDIGYGIKGAVNIPLGDT
                     AAARIVGYGTHFAGFIDALGPAGGKNVNDGSRVGGRLSVLWEPVAELKLTPRIVYQKV
                     KANGFNRQEIFNLYSNPYTDPPYTYDERQQYLLMREAFRDETTIADLTASYNFGPVEL
                     TSITSYINRDILVSRDASALTGSVSVDLGFPDAGVNLPSNLRDTTKLKQWTQEVRLSS
                     TGEGPLQWLVGGFYSDVDRLYRQRLPTPGYDVFLNQFFVDICDADPDDCASPGVPVTT
                     ADVANGFPLDSPYNADLPYDIKQSAVFGEASYDFGQFKLTAGGRYYDFKETRDFINGG
                     FFAPGVTTLGDTTKSNGFSPRVIGTWEPNDNLSVNVQAAKGFRLGGINDPLNETLCSE
                     ADWDLYSPFAQESYDDETLWNYEAGVKYSKRGFTFNTAVFHTDIKDLQVTVDAGGCSS
                     RLVFNVPKAHTTGIEAELAASPMPGLDLSLAGSYVDAKFDSTIDNPLLATATGIRDGN
                     RLPTVPKFQIAAAATYTQRFNDRSEWYVNASYQHVGARYTQPGDQENNPRTFEHGLPF
                     NGMTGDEATTLNLKLPEYDLVNVSLGLRFDSGLEVVAYVNNLFDENPLLSFDRERGGR
                     ARLGWNVGQPRTIGLTLRHRFAARPVVAPPPVVVAPAPAPAPPATVSCPDGTTVLATD
                     SCPVVQAPPPPPPPAPERG"
     gene            6244..7491
                     /locus_tag="VHN55_09230"
     CDS             6244..7491
                     /locus_tag="VHN55_09230"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2804143.1"
                     /translation="MRQPLLTRRSLLVGAGGAAVLAKAAGAQVAGRGEHVAVIGAGVF
                     GAWTAHHLLNAGHKVTLVDAWGPANARASSGGESRMTRAAYGKDSIYTRMAMDSLPQW
                     KALSDVSSLPILVPAGVLFFFPTEEPYLHDSIAAHRALGLPSEQLTAAQMASRFPMID
                     FDGVAAGIFEPGFGALMARRAVLTLVDRFVRAGGEYVQGAAEPIGPEAADELGAIRIG
                     HGRVIRADRFVFALGPWLPKIFPNLLAGRIVPTRQEVFFFAPPAGDRRFQPAAMPGWA
                     DFNGGDIFYGFPDLESRGVKFAHDAHGAIVDPDTQSREPTEAALKEIITFRDRRFPLL
                     KGAPLTEARVCQYENSSNGDFLIDFHPKLENVLLLGGGSGHGFKHGPEVGSHAAARLF
                     GTVKPEPRFSLATKAESQKREVH"
     gene            complement(7488..8051)
                     /gene="grpE"
                     /locus_tag="VHN55_09235"
     CDS             complement(7488..8051)
                     /gene="grpE"
                     /locus_tag="VHN55_09235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEX2804144.1"
                     /translation="MQDEKHEEEELHEEAEEIRKETADHSPELAEHDRLTELEKALEE
                     ANSKALYAAAEVQNVRRRLEAEKGQAATYAAATFARDMLAIKDHLDRALAAVNDELRG
                     DKVASNFLAGIESTRRELDAVFARNGVERIEALGATLDPHKHQAMMEIPSEDAEPGTI
                     VEEMQPGYMLKDRLLRPALVGVAKKPD"
     gene            complement(8051..9085)
                     /gene="hrcA"
                     /locus_tag="VHN55_09240"
     CDS             complement(8051..9085)
                     /gene="hrcA"
                     /locus_tag="VHN55_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010215965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEX2804145.1"
                     /translation="MTQPISELSDRMREIFGLVVESYLERGTPVGSKALAGSVSLSPA
                     SIRGVMQELEERGLLTHPHTSAGRMPTESGLRLFVDGIMQASAPDPRERAEIERQIGR
                     DQPIEEALAAASAALSGLSQAAGVVLAPKQELRLRQLSLVPLSPERALAVLVGMDGSV
                     ENRVVSIEPGTNPDALVEVANFITGRLSGMTLAEAQARLRAEIRERREALDVAAAELV
                     ASGLAAWSEDHARRPVLIVRGQANLIDEEAAADLDRVRRLLDELEDRQDIARLLESAR
                     DAPGCRIFIGSENRMFALSGSSVIAAPYRGSHGEVVGVVGVIGPTRLNYARVVPMVDF
                     TAKALTRLIG"
     gene            9153..9869
                     /gene="rph"
                     /locus_tag="VHN55_09245"
     CDS             9153..9869
                     /gene="rph"
                     /locus_tag="VHN55_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEX2804146.1"
                     /translation="MRPSGRAPDQMRDITFEPHFTRHAEGSVLVSFGDTRVLVTASVE
                     DRVPPFLRGKGQGWVTAEYGMLPRATHTRGNREAAKGKQSGRTQEIQRLIGRSLRAVV
                     DLSKLGERQITLDCDVIQADGGTRTAAISGAWVALRIAVDKLIEAKAVKEDPIENQVA
                     AVSCGVFNGTPVLDLDYDEDSNAGCDANFVLTGDGNIVEAQLTAEGECFDEEQLLRLL
                     RLARIGCGEIFEAQLKAVAK"
     gene            9866..10477
                     /gene="rdgB"
                     /locus_tag="VHN55_09250"
     CDS             9866..10477
                     /gene="rdgB"
                     /locus_tag="VHN55_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010407644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEX2804147.1"
                     /translation="MRDIGGKLVIATHNPGKLREIAALIEPHGIHCVGAEELGLPEPE
                     EIGNTFADNADLKAREAADLSGLTALADDSGLVVDALHGLPGIFSARWAEDSEGKRDW
                     KRAMEKVWKEVEATEPDAAPAAHFACVLSLAWPNDGQTESFEGRVDGTLVWPPRGDKG
                     FGYDPMFVPAGQEATFGEMDPEQKHKISHRADAFRKLVRALKG"
     gene            10474..11628
                     /gene="hemW"
                     /locus_tag="VHN55_09255"
     CDS             10474..11628
                     /gene="hemW"
                     /locus_tag="VHN55_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010337591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEX2804148.1"
                     /translation="MNTHLPPAGVEDLALYIHWPFCVSKCPYCDFNSHVRDTIDHEQW
                     REALLADLAHEARLLPGRRLTSIFFGGGTPSLMEPATVAALIEAARTHWAATGDIEVT
                     LEANPNSVEAERFAELGAAGVNRLSLGLQSFDDDSLRFLGRAHSASEGMAALETAQRH
                     FQRVSFDLIYALPGDTEERWARSLDRALSLGTTHLSLYQLTIEPGTRFASMAARGEFE
                     PLDADSAAALYELTDAMTSAAGLPAYEISNHAAPNAESRHNLTYWRYGDYSGVGPGAH
                     GRRLGARTVRHRKPENFLSALRRNGHGISEEARLTSREAADEALVMGLRLGEGLHVES
                     IERRFGVPVIDLRQADRLVESGHLNRSGDRIAATASGRLVLDRLLAELAA"
     gene            complement(11625..11990)
                     /locus_tag="VHN55_09260"
     CDS             complement(11625..11990)
                     /locus_tag="VHN55_09260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804149.1"
                     /translation="MIVLAVAVMLAGASEAETRHNFSECLNRAMTQAQAQKVAPDAFI
                     AFAQTACGATAAPFEEALVKTNVGHGMARKAAQTDAASQVTDYYSERLENYRFMVEAA
                     PTQAAPTQPAPTQAAAKAD"
     gene            12103..12939
                     /gene="rsmI"
                     /locus_tag="VHN55_09265"
     CDS             12103..12939
                     /gene="rsmI"
                     /locus_tag="VHN55_09265"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010215952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEX2804150.1"
                     /translation="MQTPLDPGLYIVATPIGNLGDLSPRAADVLRSVALVLAEDTRVT
                     GKLLKHVGSTAPARRYDDHSTDKDRAGFVARLGTDAVALVSDAGTPLVSDPGYKLVRA
                     ARDAGADVRTVPGPCAAIAGLTVAGLPTDRFLFLGFLPAKPKARADAIAEVAGVRATL
                     VLYESGPRLGDTLKALAEQLGPREAAVAREITKLHEECVTGTLAELAERYSSETPKGE
                     IVLVVSPPLEADEVSDADLDRMLEATLAKFSVSRAAAKVAEELKIPRKRAYARALELS
                     RK"
     gene            12936..13286
                     /locus_tag="VHN55_09270"
     CDS             12936..13286
                     /locus_tag="VHN55_09270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEX2804151.1"
                     /translation="MNRQRAERRGRGAETLACWFLRLKGWRILARRARVPGGEVDIVA
                     RRGRTLAFVEVKARSSEQAAAFSLDRYRLRRVAVAAERLAPRFMRDGDDVRVDALFVV
                     PGRIPRHLPDVWQG"
     gene            13300..14256
                     /gene="gshB"
                     /locus_tag="VHN55_09275"
     CDS             13300..14256
                     /gene="gshB"
                     /locus_tag="VHN55_09275"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEX2804152.1"
                     /translation="MTLRVAVQMDPLERINIAGDSTFALMLKAQDLGHQLYWYAPEEL
                     SWADGRLWTMGHPVTVQRVAGDHYSFGDPRILDLGKDVDVVLMRQDPPFDLGYITATH
                     LLERIQGETLVVNDPASVRNAPEKVWVLDFPHFMPPTVVTRSLGLTRKFLAEHGDIVI
                     KPLHGFAGGSVFRIAGDGRNLASLMELFNRTYREPHVVQKFLPEIAQGDKRIVLIDGE
                     VAGAVNRVPGAGEIRSNLAVGGKAAKTELTHREEEICAALAPELKARGLLFVGIDVIG
                     GKWLTEINVTSPTGIVAIDELNGTDTPALIWEAIERRLAART"
     gene            14253..14849
                     /locus_tag="VHN55_09280"
     CDS             14253..14849
                     /locus_tag="VHN55_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEX2804153.1"
                     /translation="MNDWVVRLIEQSGYLGVGFLMFLETVFPPIPSEVIMPVAGVAAA
                     KGELQLSLAILSGTAGAMLGNIFWYLAARALGIQRLKPIIDRHGKWLTVNWAEVQRAH
                     GWMERHGTAFVLVGRLVPTVRSLVSIPAGLLKMRFRRFLIASTLGTFGWTALLAGAGF
                     RLRSDFEQVDQFLAPVANTVLVLILLLYLWRLATHKAA"
     gene            complement(15000..>15773)
                     /locus_tag="VHN55_09285"
     CDS             complement(15000..>15773)
                     /locus_tag="VHN55_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEX2804154.1"
                     /translation="GGLVKASSLVGLTAADLRAFLASRRNSGLGAASAARELSGVRAF
                     LNYAAEEQGRVPQVPRTRAPRRPKTLPRPASPEDAVALAEDAGAFASEPWMGARDLAI
                     LLLLYGAGLRIAEALSLTARDLPMGETIRVTGKRSKTRVVPVVKAVREAIGDYVGQCP
                     YPIADDTPLFLGARGGPLNADLVRRAVRAARVRLGLPDTLTPHALRHSFATHLLARGA
                     DLRSLQELLGHASLSSTQIYTKVDAAHLLDVYRHAHPRA"
BASE COUNT         2686 a         5263 c         5082 g         2742 t
ORIGIN      
        1 cggctatgtc cgctcggaag ccctggcgcc tccggcctag ctgactacgg cggtctgcag
       61 ccagagcagc tggtagaggc tcgtcgcgat aagcaccgcg atcaacagcc cgatcgccca
      121 gtcgcgcctc ggcgctcgcg ggcgccgagc cgggaacagc aggaaagccg acaccgctgc
      181 gaggaagacg gtcgccagcg cgctgttgcg caaataggta acgacgacgc tgcggacgtg
      241 ctcggtcccc tgggcaaccg tttcgccgtg cggactggtc aggatcccgg ttccccaaac
      301 gatcaccgct gcgaagagaa ggaagccgcc cacgaacatc cgggcgcgcc cgatacccct
      361 gttactcaca tctctcctct cgctcggcga atggcgtacc aacgcttcac gttcgcctgc
      421 tgctccgaaa gggttttggc gaagatgtga ccgccggtcc cgtcggcgac gaagtagaga
      481 gcttcggtct cggcagggtt gaggacggcg gcgatgctgt cgcggccggg attggcgatc
      541 gggccgggcg gcaggcctgc gttgcggtag gtgttgtagg gattgcccga gttcagttcg
      601 gagcgcttga ttcgccgccc gagcggcttg cccttggtga tcgggtagat gacggtcggg
      661 tcggcatcga gcttcattcc gatacgcagc cggttgcaat aaaccccggc gatcgttcgc
      721 cgctcggcag gtttgccagt ctctttctcg acgatggacg cgagcgtaac cgcctcttgc
      781 ggcgtggtca ccgggcactt gccggtccgt ttcggccaga gcgcggcaag cgccttcgcc
      841 atcgccgcct gcattcgcga caatagcgct gcccgggtct ccccgcgctg gtaattgtag
      901 gtatccggca ggatcgagcc ttcctcgatg gcgggcaagg gcccgctgag atggggaatg
      961 gccgcgagct tctcctcgac gatgatcgct ggcatgccct cggtaacggt gatcagccgc
     1021 tgcaccggcc ttccgtgctg cagcaggtcg agaatgcccg aggcgctcat ccccttcgga
     1081 atctcgaact cccccgcctg aaccggatca ctcgagccga acagtttcgc aatcgcccga
     1141 aaggtcgttg cagtgccggg gatagccccc tgcgtctcga gttcgttcgc tacggacgcg
     1201 agggtcgagc cttcggcgac gataatcgtg tgcggcccgg gcttcggtcc cgggctccac
     1261 cacaacagcc acagcacgac aaccagtccg cccaccgcaa agccggcgag ccatgcaagc
     1321 cgtttgatca caccgctttc ataatcagcg aggcattggt gccgccgaag ccgaagctgt
     1381 tgttcagcac tgcacgcacc ttacgctcct tggccttgtg cgggacgagg tcgacgcctt
     1441 cggtgccctc gctcgggttg tcgaggttca gggtcggcgg aacgacctgg tcgcgcattg
     1501 caaggatgca gaagatgctt tcgaccgctc cggcgccgcc gagcaggtgg ccgatcgcgg
     1561 acttggtcga gctcatcgac agcgaggcga tggcgttgcc gaacaggcgg cggactgcgc
     1621 cgagctcgag ctcgtcaccg agcggggtcg aggtgccgtg ggcgttgata taatcgatgt
     1681 ccgacggctg cagccccgac tttctcagcg ccatctccat cgaccggtag gcgcccgagc
     1741 cctcgggatg cggggcggtg acatggtggg catcgccgga aaggccgtag ccgacgacct
     1801 cggcgtagat cttcgcgccg cgcgccttgg cgtgctcata ttcctcaagg acgaggaccc
     1861 cggcaccctc gcccatgacg aaaccgtcgc ggtccttgtc gtaggggcgg ctcgcctttt
     1921 ccggctggtc gttgaaattg gtcgacaggg cacgcgcctg ggcgaagccg gcgatcccga
     1981 tcgggcagat ggtcgcttcg gcgccgccag cgagcatgat gtcggcgtcg tcgtccttga
     2041 tcatccgcgc cgcgtcgccg atcgaatggg cacccgtcga gcaggcggtg acgaccgcat
     2101 ggttggggcc catcagcccg tatttgatcg aaacctggcc ggatatgagg ttgatcagcc
     2161 ggccgtggac gaagtggggg ctgactcggc ccggcccgtt ctcgaaaaga ttcacgctct
     2221 ccttctcgat acccggaagc ccgccgattc ccgagccgat cgagactccg gcacgaagcc
     2281 gcatcgcctc gtccatttcg gaaaggccgg cgtcctcaat cgcctgcccg gcagcgtcga
     2341 ttccgtaaat gatgaagggg tcgacctgcc gctgcgtctt gtggtcgacg cgcttgcctg
     2401 cgtcgaaccc gtattcgtgg tcagccggct tcacttcgca ggcgattcgg catttctggt
     2461 cgcttgcgtc gaacctggta atggccccgg cgccgctctt tccggcaact atgttgcgcc
     2521 agctggtctc gacgtcgcca cccagcggcg tcaccagccc cagacctgtc accacgacac
     2581 ggcgcatgat tgttctccgt caatgctaca caaacaaacg gcctcccgct ttggttcggg
     2641 aagccgttcg tgccgccgca ttcggcgttc agggcggcgg gaaaggctcc cgggtcagcc
     2701 ctggttcttg tcgatatagt cggtcgcgtc cttcaccgtc gtgatcttct cggcagcatc
     2761 gtccggaatc tcgacgttga actcttcctc gaacgccatg acgagctcga caatgtcgag
     2821 gctgtcggcg ccgagatcgt cgataaagct ggcttccggc gtcaccttgt cgggctcgac
     2881 gccaaggtgc tcgacgacga ttttcttcac ccggtcggca ctgtcgctca ttggggcttt
     2941 cctccgtttt gcttttgcga tgccctagcc gcgcggattg atgctcgcaa gtgcgacagg
     3001 cgcaggctaa acgcgttccc tgcagcaatg catgacagcc gttcccgctc cctcaccgac
     3061 ggtgaaatcg accttgcgcg ctccatcttc ggcgatgcgg tcgattatgg gcgcgttcgg
     3121 atcatccgtc gcaaatggtg gccgttccac ccgaggaacg cggcgatggc gccgcgcgga
     3181 aacattcatt tccaccccgc cggcgacggc tggtcggaag atttctcgaa agagccgctg
     3241 tcgatgcagg gcttcttcat ccatgaaatg acccacgtgt ggcagtcgca ggcccgcggc
     3301 cgattctacc tgcccctgat gcggcacccc ttctgcctct accgctatga actggtcccg
     3361 ggccggccct tcgaccgcta cggcctcgag cagcaggcgg agatcgtccg gcatgtcttt
     3421 cttgccgaac gcggcgcgaa ggtcaccgct cctccccgtt cgcttctgcc gttttgagcg
     3481 cgaaagcgct gtgtctggag ggcaacaggc gtggcagtaa acgcactgcg ggacgaacgt
     3541 tacactatcg tcacgtcgca gttttccgta gattcccgcc agtaagcaat atgacagggg
     3601 atcgtcacat gcgcctttcc acaaagcttc tcgtcggcac tgcgattgcc gcaatggcga
     3661 caccgtcact ggcacagcaa acgggcgatg tcggcgccac gcaagaggaa caggtcgcac
     3721 agcaggccaa ccagtcgctt ccggcccaag aagacgagat cgtgatcgtt accgcaacga
     3781 agcacgcatc gacgatccag gacgttccat tctcggtgaa tgcacagacc gaggcggaca
     3841 tccagcgcgc caatgcccag actctcgagg acatatcccg caacgtcgcg gggctcaccg
     3901 tccagaacct cggtccggga cagagccagg tgtcggttcg cggcgtttcc gcgggacaga
     3961 tcgtccgcga tcagcccgga gtgaaggaac aggtcggtgt ctacctcgac gagtcggtga
     4021 tctcgctttc gctcttcacg ccggatctcg acctcttcga cctgaaccgt gtcgaaacgc
     4081 tgcgcggccc gcagggcacg ctgttcggct ccgggtcggt gggcggcacc cttcgctaca
     4141 ttacgaacca gcccgcgctc ggaatcaccg agggcgtggt cgaagccaac gtcaacaccg
     4201 tcgacgaggg cgacatcggc tatggcatca agggcgcggt caacattccg ctcggcgaca
     4261 cggcggcggc ccgaattgtc ggctacggga ctcatttcgc tggcttcatc gatgcgctcg
     4321 gcccggccgg aggaaagaac gtcaacgacg gctcgcgagt aggcggccga ttgtcggttc
     4381 tgtgggagcc tgtggcggag ctcaagctca ccccgcgcat cgtctaccag aaggtgaagg
     4441 cgaatggctt caaccggcag gagatcttca acctttactc caacccttac accgacccgc
     4501 cctacaccta tgacgagagg cagcagtatc tgctgatgcg cgaggcgttt cgcgatgaga
     4561 cgaccattgc cgaccttacg gcaagctaca atttcggccc ggtcgagctg acttcgatca
     4621 ccagctatat taatcgtgac atcctcgtca gccgcgacgc gtcagcgctg accgggtcgg
     4681 tgtcggtcga tctcgggttc cccgatgcgg gcgtgaacct gccgtcaaac ctgcgcgaca
     4741 cgaccaagct gaagcaatgg acccaggaag tccggctctc ctcgacaggg gaaggcccgc
     4801 tgcaatggct cgtcggcggt ttctacagcg atgtcgatcg tctctatcgc cagcgcctgc
     4861 cgaccccagg ctatgacgtc tttctcaacc agttcttcgt cgacatttgc gacgcggatc
     4921 ccgacgactg cgcgtcgccg ggcgtccctg tgaccaccgc cgatgtcgca aatggcttcc
     4981 cgctcgattc cccctacaat gcggacctgc cgtacgacat caagcaatct gccgtgttcg
     5041 gcgaagccag ttacgatttc ggtcagttca agctgactgc gggcggccgc tactacgact
     5101 tcaaagaaac ccgcgacttc atcaacggtg gtttcttcgc gcccggagtg acgacgctgg
     5161 gtgacacaac gaagtcgaac ggcttcagtc cccgggtgat cggcacctgg gagccgaacg
     5221 acaacctcag cgtgaacgtc caggcggcga agggcttccg cctcggcggc atcaacgatc
     5281 cgttgaacga aacgctctgc agcgaggcgg actgggatct ctacagcccg ttcgcacagg
     5341 aaagctacga cgacgaaacg ctgtggaact acgaagccgg agtgaaatat tcgaagcgcg
     5401 gcttcacctt caacacggcc gttttccaca ccgacatcaa ggacctccag gtcaccgtcg
     5461 atgcgggcgg ctgctcctcg cggctcgtct tcaacgttcc aaaggcccac accaccggaa
     5521 tcgaagctga gcttgctgcg agcccgatgc ccgggctcga tctgtcgctc gccggcagct
     5581 acgtcgacgc aaagttcgat tccacaatcg acaatccgct cctggccact gccacgggaa
     5641 ttcgcgacgg caatcgcctg ccgaccgtgc cgaagttcca gattgcggcg gcggcgacgt
     5701 acacgcagcg gttcaacgat cgttccgaat ggtacgtcaa tgcgtcctac cagcatgtcg
     5761 gcgcccgcta cacgcagccc ggcgaccagg agaacaaccc gcgcaccttc gagcatgggc
     5821 ttccgttcaa cggcatgacg ggcgacgagg cgacgacgct gaacctcaag ctccccgagt
     5881 acgacctcgt gaacgtctcc ctagggctgc ggttcgacag cggtctggaa gtcgtcgctt
     5941 acgtcaacaa cctgttcgac gagaacccgc tgctctcgtt cgaccgcgag cgcggtggac
     6001 gggcaaggct cggctggaac gtgggacagc cgcggaccat cggcctgacg ttgcggcatc
     6061 ggtttgccgc ccggccggtt gtggcgcccc ctccggttgt cgtggcgcct gcaccggcgc
     6121 cggcgcctcc ggccaccgta agctgcccgg acgggacgac ggtcctggcg acggacagct
     6181 gtccggtagt ccaggcgccg ccaccaccgc cccctccagc gcccgagcgc ggctgagcca
     6241 gacttgaggc aaccgctgct tacgcgccgc tcgctcctcg tcggggcggg cggcgctgcc
     6301 gttttggcga aagcggccgg ggcacaagtc gcggggcgcg gtgagcatgt cgccgtcatc
     6361 ggcgccggcg tgttcggcgc ctggaccgct caccatctgc tgaatgccgg ccacaaggtc
     6421 acgctggtgg atgcttgggg gccagcgaac gcgcgcgcct cgtcgggcgg cgaatcgcgc
     6481 atgacccgcg ccgcctatgg caaggactcg atctacacac gcatggcgat ggactcgctt
     6541 ccgcagtgga aggcgctgag cgacgtctcc agcctcccga tcctggtccc cgcgggcgtg
     6601 ctgttcttct tcccgaccga ggagccgtac cttcacgaca gcatcgccgc gcaccgcgcg
     6661 ctcgggctac cgagcgagca gctgacggcc gcgcaaatgg ccagtcggtt cccaatgatc
     6721 gatttcgacg gagtagccgc cgggatattc gagcccggat tcggcgcgct gatggctcgg
     6781 cgcgcggtcc ttacccttgt cgaccgcttc gttcgtgcgg gcggcgagta tgtgcagggc
     6841 gccgccgagc cgatcgggcc cgaggcggcc gatgagctgg gagcaatccg aatcgggcac
     6901 gggcgcgtca tccgcgccga ccgattcgtg ttcgcgctcg gaccgtggtt accgaagatc
     6961 ttcccaaact tgctcgcggg caggatcgta ccgacccggc aggaagtttt cttcttcgcg
     7021 ccacccgccg gggaccgccg cttccagccg gcggcaatgc ccggctgggc ggacttcaac
     7081 ggcggcgaca ttttctacgg cttcccggac ctggagagcc gcggcgtaaa gttcgcccac
     7141 gacgcgcacg gagccattgt cgatccggac acgcaaagcc gggagccgac cgaggcggcg
     7201 ctcaaggaaa tcatcacatt ccgtgatcgc cggttcccgc tgctgaaagg cgcgccgctg
     7261 acggaggcgc gggtctgcca gtacgagaac agctcgaacg gagacttcct gatcgacttt
     7321 cacccgaagc ttgaaaacgt gctcctgctc ggcggcgggt cagggcacgg cttcaagcac
     7381 gggccggaag tcggtagcca tgcggccgca cggcttttcg gaaccgtgaa gccggaaccg
     7441 cgattcagcc tcgccaccaa agccgagtcc cagaagcgcg aagtgcacta atccggcttc
     7501 ttggcgactc cgaccagcgc cggtctcagc agccgatcct tgagcatgta gccgggctgc
     7561 atttcctcga cgattgttcc gggctccgca tcttcggagg ggatttccat catggcctgg
     7621 tgcttgtgcg ggtcgagcgt tgcgccaagc gcttcgatcc gctcgacgcc gttgcgggcg
     7681 aacaccgcat cgagctcgcg gcgggtcgat tcgattccgg cgaggaaatt gctggcgacc
     7741 ttgtctcccc gaagctcgtc gttaaccgcc gcgagggccc gatcgagatg gtccttgatc
     7801 gcaagcatgt cgcgggcgaa ggtcgcggct gcgtaagtcg ccgcctgccc cttttccgcc
     7861 tccagccggc ggcggacgtt ctgaacctcc gcggccgcgt aaagcgcctt gctgttggct
     7921 tcctcgagcg ccttctccag ctccgtcagc cggtcgtgct cggcaagctc gggtgaatga
     7981 tccgccgttt ccttgcggat ttcttcggcc tcttcgtgaa gctcttcttc ttcgtgtttt
     8041 tcgtcctgca tcatccgatc aatctcgtaa gcgccttggc ggtgaaatcc accatgggca
     8101 ccacccgcgc atagttcaac cgagtggggc cgattactcc gacaacgccg accacctcgc
     8161 catggctccc ccgatagggg gcggcaatga ccgatgagcc ggacaaagcg aacatccggt
     8221 tctcgctgcc gatgaagatc cggcagccgg gcgcgtcgcg cgcgctttca aggagccggg
     8281 cgatgtcctg ccggtcctcg agctcgtcga gcagcctgcg cacccggtcg aggtcggcgg
     8341 ccgcttcctc gtcgatgagg ttcgcctgcc cgcggacgat cagcaccggg cggcgggcat
     8401 ggtcctcgct ccaggccgcg agcccggacg cgaccagctc ggcagcggcg acgtcgagcg
     8461 cctcgcgccg ctcacggatc tcggcgcgga gccgcgcctg cgcctcggca agggtcattc
     8521 ctgaaagccg cccggtgatg aaattcgcga cctcgaccag cgcgtcggga ttcgtccccg
     8581 gctcgattga aacgacgcgg ttctcgacgc ttccgtccat gcccaccagc accgcgagcg
     8641 cccgctcggg cgacagcggc accaggctga gctggcgaag ccgaagctcc tgcttgggag
     8701 caagcaccac gcccgccgcc tgcgagaggc cggagagtgc ggccgaggcc gctgcaagcg
     8761 cctcttcgat cggctggtcg cggccgatct ggcgctcgat ctccgcccgc tcgcgcgggt
     8821 cgggcgccga ggcctgcatg atcccgtcga cgaacaggcg aagcccgctc tcggtcggca
     8881 ttcgcccggc cgacgtgtgc ggatgcgtga gcagcccgcg ctcctcaagc tcctgcatca
     8941 cgccgcggat cgaggccggc gacaggctga cgcttccggc gagcgccttc gatcccaccg
     9001 gcgtcccgcg ctcgagatag gactcgacca cgagcccgaa aatctcgcgc atccggtcgc
     9061 tcaactcgct gatcggctgc gtcatggacc tgcatctagg attggcgggc tcagcggtct
     9121 agggagcggc caaacaagcg acaggagtcc tcatgcgccc cagcggccgc gccccagacc
     9181 agatgcgtga catcacgttc gagccgcact tcacccgcca cgcggaaggg tcggtgctgg
     9241 tgagcttcgg cgacacgcgc gtgctggtca cagcgtcggt cgaggatcgg gtcccgccct
     9301 tccttcgcgg caagggccag ggctgggtca ccgccgaata tgggatgctc ccgcgcgcca
     9361 cccacacccg cggcaaccga gaggccgcca aaggcaagca gtccggccgc acgcaggaga
     9421 tccagcggct gatcggccgc tcgcttcgcg ccgtggtcga tctttccaag ctcggcgagc
     9481 gccagatcac gctcgactgc gacgtcatcc aggccgacgg cggcacccgc acggcggcca
     9541 tttcgggcgc ctgggttgcg cttcggatcg cggtcgacaa gctcatcgag gcgaaagccg
     9601 tcaaggagga ccccatcgag aatcaggtcg cggcggttag ctgcggcgtg ttcaacggaa
     9661 cgccggttct cgatctcgat tatgacgaag acagcaatgc cggctgcgac gccaatttcg
     9721 tcctgaccgg cgacggcaat atcgtcgagg cgcaactgac cgcggaaggc gaatgtttcg
     9781 acgaagagca attgctccgg ctactccggc tcgcccggat cggttgcggc gaaatcttcg
     9841 aggcacagct gaaggcggtc gcgaaatgag ggacatcggc ggcaagctgg tcatcgccac
     9901 gcacaatccg ggcaagctcc gcgagatcgc ggcgctgatc gagccgcatg gaatccactg
     9961 cgtcggcgcc gaggagctag gccttccgga gccggaggag atcggcaaca ccttcgccga
    10021 caatgccgat ttgaaggcac gtgaggccgc ggacctgtcg ggcctgaccg cgctcgccga
    10081 cgacagcggg ctggtcgtcg atgccctcca cggccttccg ggaatcttct ccgcccgctg
    10141 ggccgaggat tccgaaggca agcgcgactg gaagcgggcg atggagaaag tgtggaagga
    10201 agtcgaggcg accgagcccg acgccgcgcc cgccgcccat ttcgcctgcg tcctctcgct
    10261 cgcctggccc aatgacggcc aaacggagag cttcgagggc cgtgtcgacg gaacgctcgt
    10321 gtggccgccg cgaggcgaca agggcttcgg ctacgacccg atgttcgtgc ccgccggcca
    10381 agaagcgacg ttcggcgaga tggacccgga gcagaagcac aaaatcagcc accgggcgga
    10441 tgcgttcagg aaactggtga gggcattgaa gggatgaata ctcacctccc gccagcggga
    10501 gtggaagacc tcgccctcta catccactgg ccgttctgcg tgtcaaaatg tccctattgc
    10561 gacttcaaca gccacgtccg cgatacgatc gaccatgagc aatggcgcga ggcgctgctt
    10621 gccgatttgg cgcatgaggc gcggctgctt cccggacgaa ggctaacgtc tatcttcttc
    10681 ggcggcggga ctccgtcgct gatggagccg gcaacggtcg cggcgctcat tgaggcggcg
    10741 cggactcact gggccgcgac cggcgacatc gaggtgacgc tcgaagccaa tcccaattcg
    10801 gtggaagcgg agcgcttcgc cgagcttggc gccgccggag tcaatcgcct gtcgctgggg
    10861 ctgcagagtt tcgacgatga ctcgctccgc ttcctcggcc gcgcccattc ggccagcgaa
    10921 ggcatggccg cgctcgaaac cgcgcagagg catttccagc gggtaagctt cgacctcatc
    10981 tatgctcttc ccggcgacac cgaggagcgc tgggcgcgat ccctcgaccg ggcgctgtcg
    11041 ctgggaacca cgcacctctc gctctaccag ctgacgatcg agcccggcac gcgcttcgca
    11101 agcatggccg cgcggggcga gttcgagcct ctggatgccg attccgccgc ggcgctttac
    11161 gagcttaccg acgccatgac gtccgcggcc ggcctccccg cttatgagat cagcaaccac
    11221 gccgccccca acgcggagag ccgccacaac ctgacttact ggcgatacgg cgactattcc
    11281 ggtgtcggtc caggggccca cggccgccgt ctcggcgccc ggacggttcg ccacaggaag
    11341 cccgagaatt tcctgtccgc gcttcgccgc aacggccacg gaatttccga agaagcgcgg
    11401 ctaacatcgc gcgaggcggc ggacgaggcg ctcgtgatgg ggctgcggct gggcgagggt
    11461 ttgcacgtcg aatcgatcga acgccgcttt ggagttccgg tgatcgacct aaggcaggcc
    11521 gatcggctcg ttgaaagcgg acatctcaac cgttcgggcg atcgaatcgc cgcgactgcg
    11581 agcggccgcc tcgtcctcga ccgccttctc gccgagcttg ccgcctagtc ggccttggcc
    11641 gcggcctggg tcggcgcggg ctgggtcggc gcggcctggg tcggcgcggc ctcgaccatg
    11701 aagcggtaat tctccagccg ctccgaataa taatcggtca cctgcgaagc cgcgtcggtc
    11761 tgggcggctt tgcgcgccat tccatgaccg acattcgtct tcaccagcgc ttcctcgaac
    11821 ggcgccgcgg ttgcgccgca agcagtctgg gcaaaggcaa tgaaggcgtc gggagcgact
    11881 ttctgggcct gggcctgggt catcgccctg ttcaggcatt cggagaaatt gtgacgggtt
    11941 tcggcctcgc ttgcgcccgc gagcatgact gccacagcaa gtacaatcat caggagactc
    12001 ccctctgcat ctgatgattg gcggagagtg actcttttcg cgcagttgtt caagggtttg
    12061 gccggcgctt gcagtcgcgg gccggggcgg cgactgtagg ggatgcaaac tccgctcgat
    12121 cccggcctct atatcgtcgc cacgccgatc gggaacctgg gcgacttgag cccccgcgcg
    12181 gcggacgtgt tgcgttcggt cgcactcgtg ctggccgagg acacccgagt gacaggcaag
    12241 ctgctcaagc atgtcggctc gacagcgccg gcccgccgct atgacgacca ttcgaccgat
    12301 aaggatcggg ctgggttcgt cgcacggctg gggaccgacg ccgtcgcgct tgtgagcgac
    12361 gccggaacgc cgctcgtctc cgacccgggc tacaagctgg tccgggcggc gcgcgatgcc
    12421 ggagccgatg ttcggaccgt tcccggcccc tgcgctgcga tcgccggatt gacggttgcg
    12481 gggctgccga ccgaccgctt tctgttcctc ggcttccttc cggcgaaacc aaaggcgcgc
    12541 gccgacgcga tcgcggaagt cgcgggggtc cgagcgacgc tcgtgctcta tgaaagcggc
    12601 ccgaggcttg gcgacacgct gaaggcgctt gcggagcagc tcgggccgcg cgaggccgca
    12661 gtcgcgcggg agatcaccaa acttcacgag gaatgcgtga cgggaacgct ggccgagctt
    12721 gccgaacgct attccagcga aactcccaaa ggcgagatcg tcctcgtcgt ctcaccgccg
    12781 ctcgaagcgg acgaggttag cgatgccgac ctggaccgga tgcttgaagc gacattggcg
    12841 aaattctcgg tttcacgcgc cgctgcaaag gtcgccgagg agctgaagat accgcgcaag
    12901 cgcgcctatg cgcgggcgct cgagctgtcg cgcaaatgaa tcggcagcgc gcggaaaggc
    12961 gcggacgcgg cgcggagacg ctggcctgct ggttccttcg gctcaagggc tggcgaatcc
    13021 ttgcccgacg ggcacgcgtt ccaggcggcg aggtggacat cgtcgctcgg cgcgggcgga
    13081 cgctcgcatt cgtcgaggtg aaggcccgaa gcagcgagca ggccgccgcc ttttccctcg
    13141 accgctaccg cctgcgccgg gtcgcggtcg ctgccgaacg ccttgccccg cgatttatgc
    13201 gggacggcga cgacgttcgc gtggacgccc tattcgtggt gcctggacgc attccgcgcc
    13261 accttcccga cgtctggcaa gggtgatagg cgcgccggca tgacccttcg cgtcgccgtt
    13321 cagatggacc cgctcgagcg gatcaacatc gctggggatt cgaccttcgc gctgatgctg
    13381 aaggcgcagg atctcgggca ccagctctac tggtatgcgc ccgaggagct gagctgggct
    13441 gacggaaggc tgtggacgat gggccatccc gtcaccgtcc agcgcgtcgc cggcgaccac
    13501 tacagcttcg gcgatccgcg catcctcgac ctcggcaagg atgtcgacgt ggtcctgatg
    13561 cgccaggacc cgccgttcga tctcggctat atcaccgcca cgcacctgct ggagcggatc
    13621 cagggcgaga ctctggtagt caacgacccg gcaagcgtcc gcaacgcgcc cgagaaagtg
    13681 tgggtgctcg atttcccgca cttcatgccg ccgacggtcg tgacccgctc gctcggcctc
    13741 acccgcaagt tcctcgccga acatggcgac atcgtcatca agccgcttca cggattcgcc
    13801 ggcgggtcgg tgttccggat cgccggcgac ggccgcaacc tcgcttcgct gatggagctg
    13861 ttcaaccgca cttaccgcga accgcacgtc gtccagaaat tccttcccga gatcgcacag
    13921 ggggacaaac ggatagtgct catcgacggc gaggtggcgg gcgccgtcaa ccgggtccct
    13981 ggcgcgggcg aaatccgctc caacctcgcg gtgggcggca aggcagcgaa aaccgagctc
    14041 acccaccgcg aagaggaaat ctgcgccgcg ctcgcacctg agctgaaggc gcgcggcctg
    14101 ctgttcgtcg gaatcgatgt gatcggcggc aaatggctga ccgagataaa cgttacctcc
    14161 ccaacgggga tcgtcgcgat cgacgagttg aacgggaccg acacgccggc gctcatctgg
    14221 gaagcgatcg agcggcgcct ggcggcgcgc acatgaacga ttgggtcgtc cgcctgatcg
    14281 agcaatcggg ctatctcggc gtcggcttcc tgatgttcct ggaaaccgta ttcccgccga
    14341 taccgtcgga agtgatcatg ccggttgcgg gagtcgcagc ggcgaagggc gagcttcagc
    14401 tgtcgctggc aatcctgtcg ggaaccgccg gcgcgatgct cggcaacatc ttttggtatc
    14461 tcgccgcccg ggcgctcggg atacagcggc tcaagcccat catcgaccgg cacggcaaat
    14521 ggctgaccgt gaactgggca gaggtccaac gcgcgcatgg gtggatggag cgccacggaa
    14581 ccgcgttcgt gctggtcggg cggctagtcc cgaccgtccg ttcgctggtg tcgatcccag
    14641 cgggccttct caagatgcgg tttcgccgtt tcctcatcgc gtccaccctc ggaacgttcg
    14701 gctggacggc gctgctcgcc ggcgccggat tccggctgcg gtcggatttc gagcaggtcg
    14761 accagtttct tgctccagtc gccaacaccg tcctcgtgct gatcctgctc ctctatttgt
    14821 ggcggctggc gacccacaag gcggcctgac tggtccattg cggacacaat ctatcggctt
    14881 ggtttacctg cggtcatcca cggacacggg gctgcggcgc ggctccgctt ccccacttgg
    14941 gggcccgccg cggcaaataa tcacgcgcag gctgtccggg ggacagccga gcatgatcat
    15001 cacgcccgcg ggtgcgcgtg gcgatagacg tcgagcaaat gcgccgcgtc gaccttcgta
    15061 tagatctggg tcgacgacag gcttgcgtga ccgagcagtt cctgaagcga gcgcaggtcg
    15121 gcgccgcgag caagcagatg ggttgcgaag ctgtgccgaa gcgcatgcgg agtgagcgtg
    15181 tcaggcaggc ccagccgcac cctcgccgcc cgaacggcgc gccggacgag gtcggcattc
    15241 agcggccctc ccctcgcacc gaggaacaat ggggtgtcgt cggcaatcgg ataggggcac
    15301 tgacccacat agtcgccgat cgcctcgcga actgctttga cgacgggcac gacccgggtt
    15361 ttcgatctct tgccggtcac ccggatcgtc tcgcccatcg gcagatcgcg cgccgtcaga
    15421 gacagcgcct cggcaattcg aagtcccgcc ccgtagagga gcagcaggat ggcaaggtcg
    15481 cgcgcgccca tccacggctc ggacgcgaag gcgcccgcgt cctcggcgag agcgactgca
    15541 tcctcgggcg aagccggcct tggcagggtc ttcggccgcc gcggagcgcg agtgcgcggc
    15601 acttgcggca cgcgcccctg ttcctcggcg gcatagttga ggaatgcgcg gacccccgat
    15661 agctcgcggg cggccgaagc cgctccaagt ccactgttcc gccgcgacgc gaggaaggcg
    15721 cgaaggtccg cggccgtgag gccgaccagc gacgaggcct tgaccaggcc gcc
//
LOCUS       DATAKH010000223         3383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26711,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000223 DATAKH010000000
VERSION     DATAKH010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26711"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VHN55_09290"
     CDS             <1..459
                     /locus_tag="VHN55_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804155.1"
                     /translation="LDFAARIHSPESAANAQTDIGELVERLAGAIREIAATRDVQIDG
                     SRTTTDLTAAVQAEVAERLVLRMCSAVIARASPGEHLRLSVDQGRDHCTVSITRPRAL
                     FDLRDDDLFGTASDAMSPEFPLRLARGLAQTAGADIITCERCITLLFHRT"
     gene            505..579
                     /locus_tag="VHN55_09295"
     tRNA            505..579
                     /locus_tag="VHN55_09295"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:537..539,aa:Ile,seq:cat)
     gene            635..711
                     /locus_tag="VHN55_09300"
     tRNA            635..711
                     /locus_tag="VHN55_09300"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:669..671,aa:Pro,seq:tgg)
     gene            complement(718..978)
                     /locus_tag="VHN55_09305"
     CDS             complement(718..978)
                     /locus_tag="VHN55_09305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804156.1"
                     /translation="MRIFLFTPLLLLGGCNVSTDSANEQMTVQYNQDAAEEALSDAGN
                     TAEDIGEAIGNEVDETAAKVDNSGIVADDGSDTASNEASNQQ"
     gene            complement(1001..2368)
                     /locus_tag="VHN55_09310"
     CDS             complement(1001..2368)
                     /locus_tag="VHN55_09310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX2804157.1"
                     /translation="MHRSIILTLALAFAAPVAAQSVPQQVKQLRDSALHDNYAWDITE
                     GLTTEVGQRLAGTAAEARARAWSVAKLKSMGFSNVRVESFDLPIWTRGAESAEILSPF
                     PQRLVVAALGNSASTGPKGITAQVVGFDTLAELEAAPDSAVRGKIVFVSHAMPRTQNG
                     AGYGYFGGPRRQGPSVASRKGAVAIVIRSIGTDYHRNPHTGVMSFADGVKPIPAGALP
                     LPDAEQLQRILKRGRPVTMHLTLVSQSGRGQSGNVIAEVPGRDPSLPPVLVGGHLDSW
                     DQGTGAIDDAAGVAIAAAAAKRIMDAGSPLRTIRIVWFGAEETGLFGGLDYQRAHPEP
                     HYAVVESDFGAGRIWQVNSKLGTERAAEARMLQLALAPLGIVPGRLDQAEGSDIGPMI
                     EAGVPAVGLSQDGTYYFDYHHTPDDTLDKVDPEDLRQNVAAWTAMLAVLAGPIEPEPQ
                     RRQAR"
     gene            complement(2425..>3383)
                     /locus_tag="VHN55_09315"
     CDS             complement(2425..>3383)
                     /locus_tag="VHN55_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006967771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HEX2804158.1"
                     /translation="DGVPARRTTVTIERPKTILTRNSSPDIGFDRSVNPYRGCEHGCI
                     YCFARPTHAYHDLSPGVDFESRLFVKPDAAALLHQALARPGYQCAPIALGTNTDPYQP
                     IEERWKITRSVIELLLECRHPFTITTKSDRVLRDLDILKPAAALGIASVALSVTSLDP
                     KLSRILEPRAPAGRKRVEAIRRLNAEGVPCHVAIAPVIPQITDHELESIVEAAVAAGA
                     RGGFFLPVRLPHEVAPLFRDWLKQHFPDRAGKVMSVIRQMRGGRDNDPNFFSRMRGKG
                     PWADLLKTRFEIAVKKHGLRQARFALRRDLFEPPQGDQLRLL"
BASE COUNT          565 a         1098 c         1098 g          622 t
ORIGIN      
        1 ctcgacttcg ccgcccggat ccactcgccg gaaagtgccg caaatgcgca aaccgacatc
       61 ggcgagctcg tcgagcggct cgccggtgca atccgggaaa tcgccgcaac ccgcgatgtt
      121 cagatcgacg gttcgaggac gacgacggac cttaccgccg ccgttcaggc cgaagttgcc
      181 gagcgcctgg tactgcgcat gtgcagcgct gtcatcgcac gcgcgtcacc gggcgagcac
      241 ttgcgcctct cggtcgacca ggggcgcgac cattgcaccg tttccatcac tcgcccgcgg
      301 gcgctttttg accttcggga cgacgatctg ttcggaaccg cgagcgacgc catgtcgccg
      361 gagtttccgc ttcggctcgc ccgcggcctg gcgcagaccg cgggcgccga catcatcacc
      421 tgcgaacgct gcataaccct gctcttccac cgcacctgac ttggcggcgg ccgccgccgc
      481 gtctatctcg gcctccgcgc ggtggggcct gtagctcaac ggtagagccg gccgctcata
      541 acggctaggt tgggggttcg aatccctccg ggcccaccat tccggctgac atgccgtggg
      601 catgttacta aggaatggtc acgccaacga gtgtcgggga gtggcgcagc ctggtagcgc
      661 atctgctttg ggagcagagg gtcgcaggtt cgaatcctgt ctccccgacc aacccgctta
      721 ttgctggttc gacgcttcgt tagaggcggt gtccgagccg tcgtccgcga caattccgct
      781 gttgtcgacc ttcgccgcgg tttcgtcgac ttcattgccg attgcctcgc cgatatcctc
      841 ggcggtgttg ccggcatccg acaaagcctc ctctgcagcg tcctgattgt actgcaccgt
      901 catttgttcg ttggccgaat cggtcgagac gttgcagccg ccaagcagca gcagaggggt
      961 gaaaaggaaa atgcgcatcc gggtcctcct gttttgaagg tcaacgcgcc tgacgccgtt
     1021 gcggctccgg ctcgatcggg ccggcgagca ctgccagcat tgcagtccac gcggcgacat
     1081 tctggcgaag gtcttccgga tcgactttgt cgagcgtgtc gtcgggcgtg tgatggtaat
     1141 cgaaataata ggtgccgtcc tggctcaggc cgacagcggg tacgcccgcc tcgatcatcg
     1201 ggccgatgtc cgacccttcg gcctggtcga ggcggccggg aacgattccg agcggtgcca
     1261 gcgccagctg gagcattctc gcttcggccg cgcgctctgt tccgagcttg ctgttgacct
     1321 gccagatgcg tccggcgccg aaatcgctct cgacgacggc gtaatgcggc tccgggtgag
     1381 cgcgctggta atcgagcccg ccgaacaggc cggtttcctc cgccccgaac cagacgatcc
     1441 ggatcgtccg cagcggcgat ccggcatcca tgatccgttt ggcggcagcg gccgcgatcg
     1501 cgactccggc agcatcgtcg atcgcgccgg taccctggtc ccagctgtcg agatgcccgc
     1561 cgacaaggac cggcggcagg ctggggtcgc gccccggcac ttccgcgatg acgttgcccg
     1621 actgtccgcg gcccgattgc gaaaccagag tcaggtgcat cgttactgga cgaccgcgct
     1681 tcaagatccg ctgcaactgc tcggcgtcgg gaagcggcag tgcaccggcg gggatcggct
     1741 ttacgccgtc ggcgaagctc atcactccgg tgtgcgggtt gcgatggtag tcggtgccga
     1801 tcgagcggat cacgattgcg accgctccct tgcggctggc aacgctcggc ccctggcgcc
     1861 gcggcccccc gaaatatccg tagccggcgc cgttctgggt ccgtggcatg gcatggctga
     1921 cgaaaacgat cttacctcga accgcggaat cgggcgccgc ctccagctcg gcaagcgtgt
     1981 cgaagccgac aacctgggcg gtgatgccct tcgggccagt cgaagcgctg ttaccaagcg
     2041 ccgcgaccac caggcgctgg gggaatggcg agaggatttc cgcgctctcc gcgccccgag
     2101 tccagattgg aaggtcgaag ctctcgacgc gcacgttcga gaagcccatc gatttcagct
     2161 ttgcgaccga ccaggctcgt gcacgcgctt cggccgcggt gcctgccagg cgctggccga
     2221 cttccgtcgt cagcccttcg gtaatgtccc aggcgtaatt gtcgtggaga gcagagtcac
     2281 ggagctgctt tacctgttgg gggacacttt gggcggcgac tggcgctgcg aaagcaagcg
     2341 ctagggtaag aatgatcgag cggtgcattc cacagcgcct agcgaacaac ttcgcccgct
     2401 gtcacgaccg tcggtcgaaa aatgttacag cagccgcagc tggtcgccct gcggaggctc
     2461 aaacaggtcg cggcgaagag cgaacctggc ttgtcgaagc ccatgtttct tcacggcaat
     2521 ctcgaaccga gtcttgagaa ggtcggccca gggacccttc ccgcgcattc gactgaagaa
     2581 atttggatcg ttgtcgcgcc cgcctcgcat ctgccggatg accgacatga ccttgccggc
     2641 ccggtcgggg aaatgctgct tcagccagtc ccggaacaag ggcgccactt cgtggggcag
     2701 acggacaggt aggaagaacc cgccccgtgc gccggccgca accgcggctt cgacgatgct
     2761 ctcgagctcg tggtcggtga tttgcgggat aaccggggca atcgcgacat ggcacggcac
     2821 accctccgcg tttaggcgcc tgatggcttc cacccgcttg cgcccggctg gcgccctcgg
     2881 ctcgagaatc cggctcagct tcgggtcgag cgaggtgacc gacaaggcca cggacgcgat
     2941 tcccagcgcc gccgccggct tcaatatatc gaggtcgcgc aacacccggt ccgatttggt
     3001 cgtgatggtg aaagggtgcc tgcattcgag tagcagctcg atgaccgagc gggtgatctt
     3061 ccagcgttcc tcgatcggct ggtagggatc ggtgttggtc ccgagggcga tcggggcgca
     3121 ctggtagccc ggcctggcca gcgcctggtg aagaagtgcg gccgcgtccg gcttgacgaa
     3181 aagccgtgac tcgaaatcca cgccgggcga caaatcgtga taagcgtggg tcggcctggc
     3241 gaagcagtag atgcagccat gctcgcatcc gcgataggga tttaccgagc gatcgaaacc
     3301 gatgtccggc gacgagttgc gggtcaggat cgtcttcggc cgttcgatcg tgacggtcgt
     3361 ccgccgagct ggcaccccgt cca
//
LOCUS       DATAKH010000224        12588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_5890,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000224 DATAKH010000000
VERSION     DATAKH010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 12588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12588
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5890"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1632)
                     /locus_tag="VHN55_09320"
     CDS             complement(<1..1632)
                     /locus_tag="VHN55_09320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX2804159.1"
                     /translation="MVAAGKWLGKTGALAASAWLTAVGAIAATPVGDRWAANPDEQYL
                     LDVKVHQYRLGDGVRAYNTPEGTCVVFGDFLTTLDVPMKIDLSAKKASGWAFKESNRI
                     SIDVAAAKVEYAGNSEALAKGAVRETPEGWCVDSAALSRWFGIGVKPLTSGSVLVLES
                     EAKLPVELALEREKRAANLHQAKFDLSSLPQVRIPYRMWRAPALDFVVSAGMTYRADT
                     GMRVDRRSSVYAAGEFAHHSYDAQLATDQKGVPSSLRLRAYRSDPEAKLLGPLHATHY
                     GLGDVAGLTTRLSGSATSGRGAVLTNRPIVNPTSFDRTRFEGDLPAGWDAELYRNGQL
                     LAFARSDGRQRYVFDDVQLMYGENQISIVLYGPQGQVRTREEMINVGQENVPPGKTWY
                     WAGINQPGRDLVALHDEQVSAAEPSIQATASVEHGLDERTSVGMLARTMLLEDQRVTF
                     VEGSLRRSIGPALVEFGVSRESSGGTAARAQLLAKLGSVNVSAEAVAANDFHLRGGPP
                     TSVRDARLAVDAPIRLGRAVIPAHAAVHYTDRLDGS"
     gene            complement(1661..2500)
                     /locus_tag="VHN55_09325"
     CDS             complement(1661..2500)
                     /locus_tag="VHN55_09325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HEX2804160.1"
                     /translation="MGIVEMHLFTKAVAAAALVAAPVLPLQLAAAGVGDLLVAPTRLV
                     LNGGRSAEVILNNIGEEPATYRISAEFRRMNPDGTLEEVAEPTQAENAARDMLIFAPR
                     RVTLAPREPQSIRIAARPPAGLPDGEYRIHLLFRAVPPATPVAKPASEPAKGLSFKLT
                     PIYGVTIPVIVRLGNLDVKAAISNVRVERRDGKPVIALDVGRTGGRSTFGEVRVLKSG
                     VKDPIAQSRAVAVYTELNQREVVVPVDEAFTGDLTGPVTVQYVESFDDGTKTLAETQA
                     VLR"
     gene            complement(2649..3161)
                     /locus_tag="VHN55_09330"
     CDS             complement(2649..3161)
                     /locus_tag="VHN55_09330"
                     /inference="COORDINATES: protein motif:HMM:NF025710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4402 domain-containing protein"
                     /protein_id="HEX2804161.1"
                     /translation="MKKLLISAGAIAALALSSAPAQAATPTNGQATATARIYTPLTLV
                     MDRSLDFGTIVKSGTGAYTDTIVMDLAGGISGCANVVCAASGQTAQYTATGTQGATVA
                     VTVSPTIAMSNLTTTTAPDLTLTVNAPASVTLDATGNNTFDLAGSIQVSDTTAEGLYE
                     GTFDVSADYQ"
     gene            complement(3312..3836)
                     /locus_tag="VHN55_09335"
     CDS             complement(3312..3836)
                     /locus_tag="VHN55_09335"
                     /inference="COORDINATES: protein motif:HMM:NF025710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4402 domain-containing protein"
                     /protein_id="HEX2804162.1"
                     /translation="MAFSYAFAWSLAAAALLAGASAPARAQCRLCTDPTTEVRKDDTG
                     AAIRIEVETTLDFDRLVLFGGGDGAATLLPTGERSATGTVAALSASATVGAVTVRGEP
                     GRTVRVEMPRRVELYSLNGATIVVDRVETDLPAVPRLDSAGILTFKFGGQLTVTGDAE
                     GEYRGRVPIAVDYL"
     gene            3999..6182
                     /locus_tag="VHN55_09340"
     CDS             3999..6182
                     /locus_tag="VHN55_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013038715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX2804163.1"
                     /translation="MARSQNGTSRRPFLTAAKLLLYGGLLGLVALVVAVAVAVASLPS
                     YSELSRRSDLGQMIRVRAANGAVLVSLGPSFGQWLTYDEIPPSMRSAMVAIEDRRFRS
                     HFGVDPLGIIRAVGSAAIGGHRIRATSTITQQLARNIFLTNNRSMGRKIKEGVLALAL
                     ERKFSKDQILELYLNRVYFGGGAYGIDAASRRFFGHSADRLSLGEATIIAGLVKAPSN
                     YAPTADVEAARSRSKVVLKAMVDNGFISADQAARTDPAKIQIQSNSKTGSVRYFTDWA
                     LPQLDTLIDETSEPIDVWTTLDPKMEEAAHRAIVANSPSGAQGALVAIDRDGAVRAMV
                     GGKSYPDSIYNRATQAERQPGSAFKLFVYLTALESGMKPTDVMVDQPVEVNGWQPRND
                     NRTFVGPVTLREAFSRSINTISAQIGQQLGFGTIADMARRFGITTSISTYPAMVLGSS
                     EVRLIDMTQAFASVANRGVAVTPYGISRVVTVNGRELYRRQKPEQRVLVAPWVAAEMT
                     DLLQSAVLTGTGRSAQIGRPVAGKTGTTSSNKDGWFVGFSSGLTTGVWMGRDDAKPVR
                     GLYGGTAPARAFQDFMSVAVANRPVEQFETQVPMPDWQLGPEEEYLGDDFFDFDSPPL
                     VDENGMPLPSTGDYPPGMDPRQQQLPGQEPPGGLTQQWLDNVLGGNRERQQPRPQGQQ
                     VPPGTVQPQPDIRRQRQQPPATQPQPQPRSTTSADTAQPRPDSPQ"
     gene            complement(6132..6761)
                     /locus_tag="VHN55_09345"
     CDS             complement(6132..6761)
                     /locus_tag="VHN55_09345"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjP-like metallopeptidase domain-containing
                     protein"
                     /protein_id="HEX2804164.1"
                     /translation="MRLRLDETERLLKVTHPRHVRASAALDWAAAQRPWVDEQLARAL
                     PAEPFAAGAVIPVEGVDVELHWSEDLPRRPALRDGRLGCGGPQSGFARRIETFLKRLA
                     QDRLSVETAAIARSAGLQASSVSVGDARTRWGSCSSSGAIRYSWRLILAPSDARRFVV
                     AHEVAHLKHLNHGKDFKAFERELFGGETAAAEDLLRAVGPRLRRIGRSR"
     gene            complement(6829..7266)
                     /locus_tag="VHN55_09350"
     CDS             complement(6829..7266)
                     /locus_tag="VHN55_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010405971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HEX2804165.1"
                     /translation="MTSAKPFWEKPLSTLDRGEWEALCDGCGRCCTHKLEDDESGELY
                     PTNVACRLLDRRNGRCSDYSNRRKLVSDCVVLSRRNLDSLDWLPETCAYRLRAAGRPL
                     PDWHYLISGSRETVHEAGQSTRGWTVSEDDAGDLEFHVVERAL"
     gene            7328..7897
                     /locus_tag="VHN55_09355"
     CDS             7328..7897
                     /locus_tag="VHN55_09355"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX2804166.1"
                     /translation="MNALKCVVVAVAAVAAALPANAQLAVNSGEQFVTAIAEGDGGQA
                     LKLLQDRPNLVNARDPKGRTALVAAIKNRDRQWIGHLLQKGADPDLPGENGETPLLAA
                     ARVGLADAVGWLISVGAKVNEGNRMGETPLIVAVQRRQVQIVRMLLEAGADPDKADSA
                     QGYSARDYARRDSRTPELLRIIEAKRPKP"
     gene            complement(7894..8382)
                     /locus_tag="VHN55_09360"
     CDS             complement(7894..8382)
                     /locus_tag="VHN55_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019054485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcB family DNA repair protein"
                     /protein_id="HEX2804167.1"
                     /translation="MSTAPESLQPCLSDSPLAADVARGVTRLFCRQELFTICEVPLPN
                     GRRADMMGVDSKGNLTIVEIKVAKADLLGDCKWTDYLDFCDHFYWAVSPQLASILDGE
                     GFLPSEAGLIVADRYDAALVREAAHRPLAAARRKAELLRFARRAARRLSEQLDPSLGM
                     AS"
     gene            complement(8469..9074)
                     /locus_tag="VHN55_09365"
     CDS             complement(8469..9074)
                     /locus_tag="VHN55_09365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HEX2804168.1"
                     /translation="MSASSVAPAQVGPTAAPIVETASAGNPSAIAQELLRRSDQLAVP
                     VDTPTEEVSAVEPEAPEIDPNADLQTLVAQLRSSDPGDRQLECLSVGIYFESKGEPLA
                     GQLAVGEVIANRAESGRFPDTYCGVILQRGQFSFVRRGHWPHIRRDSQSWKTAVAIAQ
                     IVDRDLKDSKAEDALFFHARRVNPGWKKKRVASIGNHIFFR"
     gene            complement(9289..9633)
                     /locus_tag="VHN55_09370"
     CDS             complement(9289..9633)
                     /locus_tag="VHN55_09370"
                     /inference="COORDINATES: protein motif:HMM:NF019019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1491 family protein"
                     /protein_id="HEX2804169.1"
                     /translation="MSGGRLSASVEASGLVRRAEADGGFAAILHKGDAERGALLIVIR
                     GRGKLVACLERTLKPGGDYGWATVGPESSESEPELAEFLARRVQFDPDLWLIELDIAD
                     PERFIAETTLAG"
     gene            complement(9658..10122)
                     /locus_tag="VHN55_09375"
     CDS             complement(9658..10122)
                     /locus_tag="VHN55_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEX2804170.1"
                     /translation="MHLSEFLDFDAIKPALSAGNKRSLLNQLSNLAGSRLGIAPADIL
                     ATVSEREKLGSTGFGQGVAIPHGKVEGISRIYCLFVRLADPVRYKAIDREPVDLVFLL
                     LSPPDAGADHLKALAAISRVVRHAPTLEKMRGARSRDALAAVLMGADERDAA"
     gene            complement(10176..10745)
                     /gene="raiA"
                     /locus_tag="VHN55_09380"
     CDS             complement(10176..10745)
                     /gene="raiA"
                     /locus_tag="VHN55_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEX2804171.1"
                     /translation="MDVRVADHQVETGDSIKEHAIQRIEEITEKYYSRAVGADVTFGK
                     GPYADYTCDIVAPVGQGVVLKASHRAPNAQVAFECAADKIEKQLRRYSKRLKEHKAGN
                     DVSPRIEASAAYRVFAGTSEQDEVPDNPAIVAETQVDIPEASVANAVMMMDLRNTPAL
                     MFKNTKTGELNMVYRREDGNVGWVEPNDR"
     gene            complement(10803..11501)
                     /gene="dnaQ"
                     /locus_tag="VHN55_09385"
     CDS             complement(10803..11501)
                     /gene="dnaQ"
                     /locus_tag="VHN55_09385"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEX2804172.1"
                     /translation="MREIVFDTETTGLDPAGGDRIVEIGCVEMINRAETGRHFHAYFN
                     PDRPMPPGAEAVHGLSDVFLSDKPRFSEVADELLEFMDDAPLVAHNASFDFGFLNSEL
                     GICGRTSICTSRMVDTLSLARSRHPGAKHSLDALCARFGVDRSHRVKHGALLDAQLLA
                     QVYIELTGGRQIGLGLVEDTDDVVSVEARGAVTIREPRIARPHEPAIEELERHRAFIS
                     KLVDPLWARFTAAS"
     gene            complement(11510..12103)
                     /gene="coaE"
                     /locus_tag="VHN55_09390"
     CDS             complement(11510..12103)
                     /gene="coaE"
                     /locus_tag="VHN55_09390"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007405320.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEX2804173.1"
                     /translation="MIRLALTGSIGMGKSTVAEMFRRAGIPVFDADAVVRRLQGRGGT
                     LVKRIEERFPGTTGPEGVDRDALSNRVLGNPDELAALESIVHPAVHHERTRFIVENGD
                     SPALVFEIPLLFETGGDEAFDKIIVVSAPPEVQRERVLSRPGMTVEKFDALLARQTPD
                     EEKRSKADFVVDTGGDLSTTERQVRHILSCLGLGADG"
     gene            complement(12100..>12588)
                     /locus_tag="VHN55_09395"
     CDS             complement(12100..>12588)
                     /locus_tag="VHN55_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008069233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEX2804174.1"
                     /translation="EAREKARHEDAGALASALARAKALKVSCGRPGDLVIGSDSVVSV
                     DGRLYDKPADRGEAASHLRTFSDNEIRLTSSAALARDGIVEWEVCDTAILRVRPLSDS
                     FIDSYLDAEWPEVGYCVGVFRFEGRGVQLFDSVDGSYFTILGMPLLPLLAALRERRAI
                     PE"
BASE COUNT         2155 a         4174 c         4100 g         2159 t
ORIGIN      
        1 gcttccgtcg agccggtcgg tgtaatgcac tgcggcatgg gccggaatca ccgctcgccc
       61 cagccggatc ggtgcatcga ccgccaatcg cgcgtcgcga acgcttgtcg gcggcccgcc
      121 gcgaaggtgg aaatcgttcg ccgcgaccgc ttcggcgctg acgttgaccg agcccagttt
      181 cgcaagcagc tgggctcgcg cggcggtgcc gccgctgctt tccctcgata cgccgaattc
      241 cacgagcgcg ggcccgatcg accggcgaag cgagccttcg acgaaggtca cccgctggtc
      301 ttcgagcagc atggtccgcg caagcatccc gaccgatgtc cgctcgtcga gcccgtgctc
      361 gaccgacgcc gtcgcctgga tgctcggctc cgcagcgctc acctgctcgt cgtggagggc
      421 gacgagatcg cggccgggct ggttgattcc ggcccagtac caggtcttgc caggcgggac
      481 gttttcctgg ccgacattga tcatttcctc gcgcgttcgg acttgcccct ggggcccgta
      541 gagaacgatg ctgatctggt tctcgccgta catcagctgg acgtcgtcga acacgtaacg
      601 ctgccggccg tccgaccgcg cgaaggcgag gagctggccg ttgcggtaca attccgcgtc
      661 ccaacccgcc gggaggtcgc cttcgaagcg cgtccggtcg aagctggtgg gattgacgat
      721 cggccgattg gtcaggacgg cgccgcggcc gctggtggcg cttccgctaa ggcgcgtggt
      781 cagcccggca acgtcgccca atccgtaatg ggtcgcgtgc agcggcccga gcaacttcgc
      841 ttccgggtcg gaccggtagg cgcgcagccg gaggctcgaa ggaaccccct tctggtccgt
      901 cgccagctgg gcgtcgtagg aatggtgggc gaattcgccc gccgcgtaga cggacgagcg
      961 ccggtccacc ctcattccgg tgtcggcgcg ataggtcatt ccggcgctga ccacgaagtc
     1021 gagcgcgggc gcgcgccaca ttcgatacgg aatacggact tgcggcaggc tcgacaggtc
     1081 gaacttcgcc tggtgaaggt tggcggcacg cttttcccgc tccagcgcga gctctaccgg
     1141 cagtttcgcc tcggattcga ggaccaggac agagccgctt gtcagcggct tcactccgat
     1201 cccgaaccat cgcgacaggg ccgccgaatc gacgcaccat ccttccggcg tctcgcggac
     1261 cgcgcccttc gcaagcgctt cgctgttgcc ggcgtactcg acctttgcgg cagcgacgtc
     1321 gatggatatc cggttgcttt ccttgaacgc ccacccgctc gccttcttgg cggaaaggtc
     1381 gatcttcatc gggacatcga gggtggtcag gaaatcgccg aagacgacgc atgtgccctc
     1441 gggcgtgtta taggcgcgaa cgccgtcacc aaggcgatat tggtgaacct tgacgtcaag
     1501 cagatattgt tcgtcggggt tggctgccca gcggtcgccg accggggtcg cggcaattgc
     1561 gccgaccgcg gtcaaccagg cggaagcggc gagcgccccc gtcttgccca gccatttgcc
     1621 ggcggcgacc atggtttcct accgcgcttc tttgcgcccc ctagcgcagg accgcctgcg
     1681 tttcggcgag tgtcttggtg ccgtcgtcga agctttcgac atattggacc gttaccggcc
     1741 ccgtaaggtc gccagtgaag gcctcgtcga ccgggaccac gacctcgcgc tggttcagct
     1801 cggtatagac ggccacagcg cgcgattgcg cgatcgggtc cttcacgccc gacttgagca
     1861 ctcgcacttc gccgaacgtc gagcgaccgc cggtgcggcc gacgtccagc gcgatgaccg
     1921 gcttgccgtc gcggcgctcc acgcggacgt tcgaaatcgc cgccttcacg tcgagattgc
     1981 cgagccggac gatcacgggg atggtaactc cgtaaatcgg cgtaagcttg aagctcagcc
     2041 ccttggccgg ttcgctggcc ggtttcgcca ccggcgttgc cgggggaacg gcccgaaaca
     2101 gtaggtgaat ccgatattcg ccatccggca ggcccgccgg cggcctggcc gcgattcgga
     2161 tcgactgcgg ctcgcgcggc gccagggtca cccggcgcgg ggcgaagatg agcatgtcgc
     2221 gcgcggcatt ctccgcctgc gtcggctcgg ccacttcctc gagcgtgccg tcggggttca
     2281 tccgccggaa ttccgccgag atccggtagg tcgccggctc ctcgccgata ttgttgagga
     2341 tgacctctgc gctgcggccg ccgttgagca cgaggcgggt cggagcaacc aagaggtcgc
     2401 cgacgccggc agcggccagc tggagcggaa ggacgggggc ggcaacaagc gccgccgcgg
     2461 cgacggcttt ggtgaacagg tgcatttcga cgatccccac tttgctccat tcaggagccg
     2521 atcaccgcca ccttgcgccg gaatggttga ttttcggttc accacgccca gtgaatccac
     2581 gaaaaagggg ccgccgttgc cggcgacccc tcgacgcggc gcgaagccgc gtactggcca
     2641 agcgcgattt actggtagtc ggcgctgacg tcgaaggtgc cctcgtagag cccctcggcc
     2701 gtcgtgtcgc tgacctggat cgaaccggcg aggtcgaaag tgttgttgcc ggtcgcatcg
     2761 agagtgacgc tggccggagc gttgaccgta agcgtcaggt ccggagccgt cgtcgtggtc
     2821 aggttcgaca ttgcgatcgt cggcgaaacc gtcacggcga cggtcgcgcc ctgggtgccg
     2881 gtcgcggtgt actgagccgt ctggccggac gctgcgcaga ccacgttggc acagccggaa
     2941 attccgccgg ccaggtccat cacgatcgtg tcggtgtagg cgccggtccc gctcttgacg
     3001 atggtcccga agtcgaggct gcggtccatc accagggtga gcggcgtata gatgcgggcg
     3061 gtcgcggtcg cctgcccgtt ggtcggggtg gcggcctgcg ccggagcgct ggaaagagcc
     3121 agcgccgcaa tcgcgccggc agaaatcaga agctttttca tttcgaattt ccccactggt
     3181 tcaaaatcag cggctgcccg accgctggtc cggtcatccg tgggaatcgc attaaccggc
     3241 gtcgattacc cgttccctca aggggttggt tatcgctgtt ttaaggattg ctccgatttg
     3301 gagacgtttc ttcagagata gtcgacggcg atcggcacac ggccgcgata ctcgccttcg
     3361 gcatcgccgg tgactgtcag ctggccgccg aatttgaacg ttaggatccc cgccgaatcg
     3421 agcctgggaa cggcggggag gtcggtttcg accctgtcga ccacgatcgt cgcgccattg
     3481 agcgagtaga gctcgacccg tcgcggcatc tcgacccgca cggttcgacc gggttcgccg
     3541 cgaaccgtta ccgcgccgac ggtagcgctt gcgctcaagg cggcgacggt tccggtggcg
     3601 cttcgctcgc cggtcggaag cagggttgcg gcgccgtcgc ccccgccgaa aagcaccagc
     3661 cggtcgaagt cgagcgtcgt ttcgacctcg atacggatcg ctgcgccggt atcgtccttg
     3721 cggacctccg tcgtcgggtc ggtgcatagc ctgcactggg cgcgcgcggg cgcactcgcg
     3781 ccggcgagca gggcggcagc ggcaaggctc cacgcaaagg cgtagctgaa cgccatggcg
     3841 gaaactgcta gccggcagag gctaaaacgg ggttaatggc agcgtaacct gcggcgcgcg
     3901 atgagagcgc catggtgcga ggcacgcaat cgagcaaaac gcctgggcaa aggactttct
     3961 tgcccgatcg ccatcggctt tctatcgcct gaccgaacat ggcccgatcg cagaacggca
     4021 cctcacggcg ccccttccta accgcagcga agctgctcct ttacgggggg ctgctcggcc
     4081 tcgtcgcact tgtcgtcgca gtggctgtcg cggtcgcgtc actcccgagc tattcggagc
     4141 tctcgcgccg atcggacctc gggcagatga tccgggtccg cgccgctaac ggagcggtgc
     4201 tcgtgtcgct cgggccgagc ttcgggcagt ggctgaccta tgacgaaatt ccgccgtcca
     4261 tgcgctcggc gatggtcgcg atcgaggatc gccgcttcag gagccacttc ggagtcgacc
     4321 cgctcggaat tatccgcgcc gtcggatccg cagctatcgg cggccaccga atccgcgcca
     4381 cttcgacgat cacccagcag ctcgcgcgca acatcttcct gaccaacaac cgcagcatgg
     4441 gcaggaagat caaggaaggc gtcctggcgc tcgccctcga gcggaagttc agcaaggacc
     4501 agatcctcga gctgtacctg aaccgggtct atttcggcgg tggcgcctac ggaatcgatg
     4561 ccgcgtcacg gcgcttcttc gggcacagcg ccgatcgtct ctcgctcggc gaggcgacga
     4621 tcattgccgg cctggtcaag gcaccgtcca actatgcgcc gaccgccgac gtcgaggcgg
     4681 cgcgaagccg ctccaaagtc gtcctcaagg cgatggtcga caacggcttc atctccgctg
     4741 accaggcggc aaggacagat ccggcgaaaa tccagatcca gtcgaacagc aagaccggca
     4801 gcgtccgcta cttcaccgac tgggcactgc cccagctcga cacgctgatc gacgagacct
     4861 cggagccgat cgacgtctgg acgacgctcg atccgaagat ggaggaggcc gcccaccgag
     4921 ccatcgtcgc caactcgccc agcggcgccc agggggcgct ggtcgcaatc gaccgcgacg
     4981 gcgcagttcg agcgatggtg ggcggcaaga gctatcccga ttcgatctac aaccgcgcga
     5041 cccaggccga gcggcagccc ggatcggcct tcaagctgtt cgtctacctg accgctctcg
     5101 aatccggaat gaagcctacc gacgtgatgg tcgaccagcc ggtcgaagtg aacggctggc
     5161 agccgcgcaa cgacaatcgc accttcgtcg gccccgtcac gctgcgcgag gccttttcac
     5221 gctcgatcaa cacgatcagc gcccagatcg gccagcagct tgggtttgga accatcgccg
     5281 acatggcgcg ccggttcggc atcaccacgt cgatatcgac ctatccggcg atggtcctcg
     5341 gatcgagcga agtccggctg atcgacatga ctcaggcctt cgcctcggtc gccaaccgcg
     5401 gagttgcggt taccccttat ggaatatcca gggtcgtcac agtcaatggc cgcgagctgt
     5461 accggcgcca gaagcccgag cagcgggtgc tggtcgcgcc ctgggtcgcg gcggagatga
     5521 ccgacctgct gcagtcggcg gttctcaccg gcaccggtcg gtcggcgcag atcgggcggc
     5581 cggtggccgg caagactggc acgacgagct ccaacaagga cggctggttc gtcggctttt
     5641 cgagcgggct gacgacgggc gtgtggatgg gccgcgacga tgccaagccg gtccggggcc
     5701 tctatggcgg aacggctccc gcccgggcct tccaggattt catgtcggta gccgtcgcga
     5761 accggccggt cgagcagttc gagacccagg tgccgatgcc cgattggcag ctcgggcccg
     5821 aagaggaata tctgggcgac gacttcttcg atttcgactc gccgccgctg gttgacgaaa
     5881 acggcatgcc gctgccttcg accggcgact atccgcccgg catggacccg cgccagcagc
     5941 agcttcccgg acaggaaccg cccggcggcc tgacacagca gtggctggac aatgtccttg
     6001 gcggcaaccg cgaacggcag cagccgcggc cgcaggggca gcaggtgccg ccgggtaccg
     6061 tgcagccgca gcccgacatt cgccggcaga ggcagcaacc gcccgctacg cagccgcagc
     6121 cgcagccgcg ctcaacgact tcggccgata cggcgcagcc gcggcccgac agcccgcaat
     6181 aggtcttccg cggcagcggt ctccccgccg aacagttcgc gctcgaacgc cttgaaatcc
     6241 ttgccgtggt tgaggtgctt caagtgcgcg acctcgtgcg cgacgacgaa gcggcgggcg
     6301 tcgctcggcg caaggatcag ccgccagctg tagcgaatcg cgccgctgct gctgcagctt
     6361 ccccaccggg ttcgagcgtc gccgaccgaa accgaactcg cctgcagtcc cgccgaccgt
     6421 gcgatcgcgg cggtttccac cgacagcctg tcctgcgcca gccgcttgag gaacgtctcg
     6481 atccggcggg cgaagccgga ctgcggtcct ccgcagccga gccgtccatc gcgcagggcg
     6541 gggcggcgtg gcaggtcctc cgaccaatgc agctcgacgt cgacgccttc cacggggatc
     6601 acggctccgg ccgcaaacgg ctccgccggc agggcgcgcg cgagctgttc gtctacccac
     6661 ggcctctggg ccgccgccca gtcaagcgcg gcgctggcgc gcacatggcg gggatgggtg
     6721 accttgagca gccgctcggt ctcatccagg cgcagccgca tccgacgggc agtccggata
     6781 gggcagagta gaaccggaag cggcaggtcc gggtgggttg cgattcgctt agagcgcacg
     6841 ctcgacaacg tggaattcga gatcgccggc gtcgtcttcg ctcaccgtcc aaccgcgggt
     6901 cgattgtccc gcttcgtgga ccgtctcgcg gctgccagag atcaggtaat gccaatcggg
     6961 aagcggccgg cccgcggcgc gaaggcgata ggcgcaggtt tccggaagcc agtcgagcga
     7021 atcgagattg cgccggctga gcacgacgca atcgctgacc agctttcggc ggttggaata
     7081 atcgctgcac cgcccattgc gccggtcgag cagccggcag gcgacgttgg tcggataaag
     7141 ctcgccgctc tcgtcatctt ccagcttgtg ggtgcagcag cgcccgcagc cgtcgcacaa
     7201 cgcctcccat tcgccgcggt ccagcgtcga caaaggcttt tcccagaacg gcttggcgga
     7261 ggtcatgaca agagctgcaa tgctctgcta accccgatca atcaagccag ccccgggggg
     7321 agtccgaatg aatgcgctga agtgcgtcgt cgttgccgtt gccgccgttg ccgccgcgct
     7381 gccggccaac gcccaactgg cggtcaacag cggcgaacag tttgtgaccg ccattgccga
     7441 gggcgacggc ggccaggcgt tgaagcttct gcaggacagg ccgaacctgg tgaatgcccg
     7501 cgatcccaag ggtcgaacgg cgctggtcgc ggcaatcaag aatcgcgacc ggcaatggat
     7561 cggccacttg ctgcagaaag gcgcggatcc cgacctgcct ggcgaaaacg gcgaaacccc
     7621 actgctggcc gcggccaggg tagggctcgc cgacgctgtc ggatggctga tcagtgtcgg
     7681 cgccaaggtc aacgaaggta acaggatggg cgaaacgccg ctgatcgttg ccgttcaaag
     7741 acgccaggtg cagatcgtcc gcatgctcct cgaggcgggt gccgatccgg acaaggccga
     7801 ctcggcccag ggctattcgg cacgcgacta tgccaggcgc gacagcagaa cgccggagct
     7861 gctgcggatc atcgaagcga aacggccgaa gccctaactc gccattccca ggctcgggtc
     7921 gagctgctcc gaaagtcgcc gggccgcccg gcgcgcgaag cgcaggagct cggccttgcg
     7981 ccgggccgcc gccagcggac ggtgtgcagc ttcacggaca agcgcagcat catagcggtc
     8041 ggcgacgatc agtccggctt cgcttggcag gaatccctcg ccgtcaagaa tcgacgccag
     8101 ttgcggcgac accgcccaat agaaatggtc gcagaagtcg agataatcgg tccacttgca
     8161 gtcaccgagc aggtcggcct tcgcgacctt gatctcgacg atggtgaggt tgcccttcga
     8221 atccacgccc atcatgtccg cgcggcgccc gttcggtagc ggcacttcgc aaatcgtgaa
     8281 caattcctgc ctgcagaaca ggcgagtcac tccacgcgcg acgtcagccg ccagaggcga
     8341 gtcggaaagg caaggctgca gcgattcggg ggcggtgctc acccccgaag gctagaacaa
     8401 tgcacgaacg cagacaatcc gggagattgt cggttacgtc catcgaatgt tggggatcgg
     8461 cgcgtcgatc agcggaagaa gatgtggttc ccgatcgagg ccacgcgctt cttcttccag
     8521 cccgggttga cccggcgagc atggaaaaac agcgcgtcct ccgccttcga atccttcaga
     8581 tcccggtcga cgatctgggc gatggcaact gctgtcttcc acgactggct gtcgcggcga
     8641 atgtgtggcc aatgccccct tcggacgaag gaaaactggc cgcgctgcag gatcaccccg
     8701 caataggtgt cgggaaagcg gccgctttcg gcacgattgg cgatcacttc gccgaccgcc
     8761 agctgcccgg cgagcggctc gcccttcgat tcgaaataga ttcccacgga caggcattcg
     8821 agctggcgat ccccgggatc ggagctgcga agctgggcga ccagggtttg aagatcggca
     8881 ttcgggtcga tttcgggcgc ctcgggctca acggccgaca cttcttccgt tggcgtgtcc
     8941 accgggaccg caagctggtc ggaccgccga agcagctcct gcgcgatcgc cgaaggattg
     9001 ccagcgctcg cggtctcaac aatcggcgcg gcagtcggcc cgacctgggc cggcgcgaca
     9061 gaacttgcgc tcattgcagc gcagaccagc aacgccgaac gaagggaaac cgtcatattg
     9121 tccgtcaaaa ttgcggtgaa ccgccaatcc gcaggagctc gcagtaaact gccgcatttg
     9181 cccccggggc gattccccgt ctcgcgtggc gcttcctacc ggccattcgg cggaaagcgc
     9241 cccccgctct cgtttcggca atcgcctttc ccgccgccgc cgcgagcgtc aacccgccaa
     9301 ggtcgtttca gcgatgaatc gttccgggtc cgcgatatcc agttcaatta accaaagatc
     9361 agggtcgaac tgcacccgcc gagcgagaaa ttcggccagt tccggctcgc tttcggaaga
     9421 ctccggaccg accgtggccc agccataatc gccgcccggc ttcagagtcc gttcgagaca
     9481 ggcaaccagc ttcccgcgtc cgcggatgac gatcagaagc gctccccgct cggcatcgcc
     9541 cttgtgaaga attgcggcga aaccgccgtc cgcctccgcc cgccgaacca ggcccgacgc
     9601 ttccaccgat gcgctcaggc ggccgccgct cattgcgcgg tcacttgctg ggcgtcctca
     9661 agcggcgtcg cgttcgtccg cgcccatgag tacagccgcg agcgcgtcac ggctgcgcgc
     9721 gccgcgcatc ttctccaggg tcggagcgtg gcggaccact cgactgatcg cagccagagc
     9781 cttgagatgg tcggcgcccg cgtccggagg ggagaggaga aggaagacca ggtcgacggg
     9841 ttcgcggtcg attgccttgt acctgaccgg gtcggcgagg cgcacgaaca ggcaatagat
     9901 ccggctgatc ccctccacct tgccgtgcgg gatcgcgact ccctgaccga agcccgtcga
     9961 gccgagcttt tcccgctcgc ttaccgtcgc caggatgtcg gcgggcgcaa tcccgaggcg
    10021 gctgccggcc aggttcgaaa gctggttgag caatgaccgt ttgttgcccg ccgacagggc
    10081 gggcttgatc gcgtcgaaat cgaggaactc ggacaggtgc atgataaact tctgcaattg
    10141 gcccgcgcac atgcgcggat catcgggcgt tgacgtcagc ggtcgttcgg ctcgacccag
    10201 ccgacgttgc cgtcttcgcg gcggtagacc atgttcagtt cgccggtctt ggtgttcttg
    10261 aacatcagcg ccggcgtatt gcgcaggtcc atcatcatga ccgcgtttgc gacgcttgcc
    10321 tcgggaatat cgacctgggt ctcggcgacg atcgcgggat tgtccggaac ctcgtcctgc
    10381 tcggacgtgc ctgcgaacac ccgataggcc gcactcgcct cgatccgagg agagacgtcg
    10441 ttccccgcct tatgctcctt caatcgcttc gagtagcggc ggagctgctt ctcgattttg
    10501 tccgcggcgc attcgaacgc gacctgcgcg ttgggcgccc ggtgcgacgc cttgagaacg
    10561 actccctggc caacgggagc gacgatgtcg caggtataat ctgcgtaggg tcctttgccg
    10621 aaggtgacgt cggcgccgac cgcccgcgaa taatattttt cggtgatctc ctcgattcgc
    10681 tggattgcat gttccttgat ggaatcgccg gtttcgacct ggtggtccgc gacacgaaca
    10741 tccactttcg aggctccttt cctgggcttc ggccgccgct tagggcggcg ctcgacgctg
    10801 cgtcaactcg cagcggtgaa gcgtgcccag agcgggtcga ccaacttgga tataaacgcg
    10861 cgatggcgct caagctcctc aattgccggt tcatgcggcc gcgcgatcct gggctcgcga
    10921 atagtgacgg cgcctcgggc ctcgacagaa accacgtcgt cggtgtcctc gaccagtccg
    10981 agcccgatct gccgcccgcc cgtcagctca atatagacct gcgccagcaa ctgggcgtca
    11041 agcagggcgc catgcttgac ccggtgactg cgatcgacac cgaaccgcgc gcacaatgcg
    11101 tcgaggctgt gtttggcgcc ggggtgccgg cttcgcgcca gcgacaacgt gtcgaccatc
    11161 cggctggtgc agattgatgt ccggccgcag atgcccagct cgctgttcag gaagccgaag
    11221 tcgaagctcg cattgtgggc gacgagcggc gcgtcgtcca tgaactcgag caactcatcg
    11281 gccacttcgc tgaaccgggg cttgtcggag aggaacacgt cgctgagccc gtgaaccgcc
    11341 tcggcgccgg gcggcatcgg ccgatcgggg ttgaaataag cgtgaaagtg ccgcccggtt
    11401 tcggcgcggt tgatcatttc cacgcagccg atctcgacga tccggtcgcc gccggccggg
    11461 tcgagcccgg tcgtttccgt gtcaaagacg atttcgcgca tggtccgatt taaccatcgg
    11521 ccccgagtcc gagacaagag agaatgtgcc ggacctgccg ttcagttgtg gataggtcgc
    11581 cgccggtgtc gacgacgaag tccgccttgc ttcgcttttc ctcgtcggga gtttggcgcg
    11641 ccagcagggc gtcgaacttc tctaccgtca ttcctggccg cgaaagcacg cgctcgcgct
    11701 ggacctcggg cggggcggaa acgacgatga tcttgtcgaa ggcctcgtcg ccgccggtct
    11761 cgaacagcag cgggatttca aacacgagcg cgggcgaatc gccattttcg acgatgaacc
    11821 gcgtgcgttc gtggtgaacc gcgggatgaa cgatcgattc gagcgcggcc agttcgtccg
    11881 ggttgccgag aacgcgattg gaaagtgcgt cgcgatcgac tccctccggt ccggtggtcc
    11941 cggggaagcg ctcctcgatc cgcttgacca gcgttccgcc gcggccctga agccggcgga
    12001 cgacggcgtc ggcatcgaag accggtatgc cggcccgcct gaacatttca gccaccgtcg
    12061 acttgcccat tccgatcgag cccgtgagcg caagccggat cattcgggga tcgctcttcg
    12121 ctcgcgaagg gcggcgagca acggaagcag gggcattccg aggatcgtga aatagctgcc
    12181 gtcgacggag tcgaacaatt gcacgccgcg cccttcgaac cggaagaccc cgacgcaata
    12241 gccgacttcc ggccattccg catcgaggta cgaatcgatg aacgaatccg aaagcggccg
    12301 cacccgaaga atggccgtgt cgcagacttc ccactcgacg atgccgtcgc gggcgagcgc
    12361 ggcgctgctc gtcagccgaa tctcgttgtc cgagaaggtt cgaaggtggc tggcggcctc
    12421 gccgcggtcg gccggcttgt cgtacagcct gccgtcgacg ctgacgacgg aatcgcttcc
    12481 gatgaccagg tcgccgggcc tgccgcaact caccttcagc gccttggccc gggcaagcgc
    12541 ggacgccagg gcgccggcgt cctcgtggcg agccttctcc ctggcttc
//
LOCUS       DATAKH010000225        35537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26713,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000225 DATAKH010000000
VERSION     DATAKH010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 35537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35537
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26713"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..141)
                     /locus_tag="VHN55_09400"
     CDS             complement(<1..141)
                     /locus_tag="VHN55_09400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-binding factor A"
                     /protein_id="HEX2804175.1"
                     /translation="MRRTETPEGRSVRLLRVGEQVRHVLSELLQRGDVHDQTLQSHLV
                     SIT"
     gene            complement(263..2776)
                     /gene="infB"
                     /locus_tag="VHN55_09405"
     CDS             complement(263..2776)
                     /gene="infB"
                     /locus_tag="VHN55_09405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEX2804176.1"
                     /translation="MNDQTDKPKLGARAPLGIKRTVETGKVKQSFSHGRSNTVVVEVK
                     KRRILGKPGETPEPPKTPEPEAEAPKVEAKKPAPKAPPARPARSAPIDEMAKRKEMQE
                     RLLREAEEDRLRQSEEARRREEQAKVEQTEDERRRADENRKAEEAAAEEARRQAEEEA
                     QAAAEAASQAAAAEPAAEEEDGRAPRRHGAAPAAKRPEPARPSRGREEHRHRGKLTVS
                     RALAGEDDSRARSLAALRRAREKEKRAHQESGPAQKQVRDVVVPEAITVQELANRMAE
                     RGADLVKALFKMGMPVTLTQTIDQDTAELLVTEFGHNIKRVSEADIELGIGGEEDAPE
                     TLKPRPAVVTIMGHVDHGKTSLLDAIRGADVVSGEAGGITQHIGAYQVTLPDKSKISF
                     LDTPGHEAFTEMRARGANVTDIVILVVAADDGLKPQTIEAINHTKAAGVPMIVAINKI
                     DKPEAKPQKVREELLQHEVIVEQMGGDVQDVEVSAVQKTNLDKLLEAIQLQSEILELK
                     ANPDRAAEGTIVEAKLDKGRGPLATVLVQRGTLRVGDVFVAGASSGKVRALVDDKGRQ
                     VKEAGPSVPVEVLGLSAVPSAGDPFTVVENEARAREVATYRQGVLDRKRTTAAPVSLE
                     NMFASHASTTKELPLVIKADVHGSLEAIVHALNRLSTDEIKVRVLHSGVGAITESDVT
                     LAGASGAPIIGFNVRPNAKAREVAQRNKVEFRYYDVIYHLTDWVKGAMAGELGPEIIE
                     TVVGRAEVREVFPAGKKDKAAGLLVLEGIIRKGLNARLTREDVIVSKTTISSLRRFKD
                     DVSEVTSGQECGVLLADTNDIKPGDSLEVFEVEERARTL"
     gene            complement(2773..3462)
                     /locus_tag="VHN55_09410"
     CDS             complement(2773..3462)
                     /locus_tag="VHN55_09410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF448 domain-containing protein"
                     /protein_id="HEX2804177.1"
                     /translation="MRNPPNDPAKVAERTCVLTRRKGTRDKLIRLALGPDGSVAPDVR
                     ARAPGRGAWISVGKAQLAEAVANGRLKGALQRAFKTGALEVPPDLADRTADALRQAVL
                     DRLGMEARSGNLANGSDRVETAARAGKVHLLVHAADAGEDGRKKLDQAWRVGGGQPRG
                     VIIPVDRTILSLALGRENVVHLALIEPAAAARVSQALARWREFIDPDAGLEGGDPASG
                     IGSAEEVEGTE"
     gene            complement(3443..5077)
                     /gene="nusA"
                     /locus_tag="VHN55_09415"
     CDS             complement(3443..5077)
                     /gene="nusA"
                     /locus_tag="VHN55_09415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003042722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEX2804178.1"
                     /translation="MATAAPAAPTANKAELLAIADAVAREKLIDKGIVIEAMEDAIQR
                     AARARYGAENDIRAKLDPETGDLRLWRVLEVVEEPEDHFKQVDLKGAQKLQKGAKLGD
                     FIVDPLPPIEFGRIAAQAAKQVIFQKVRDAERERQFEEFKDRAGEIITGVVKRVEFGH
                     VVVDLGRAEGVIRRDQQIPREMVRVGDRIRSLILRVSREARGPQIFLSRAHPDFMKKL
                     FAQEVPEIYDGIIEIKAAARDPGSRAKIGVISHDSSIDPVGACVGMKGSRVQAVVQEL
                     QGEKIDIIPWSEDLATFVVNALQPATVSRVVIDEEESRIEVVVPDDQLSLAIGRRGQN
                     VRLASQLSNSQIDILTEADASEKRQREFVERSTMFQEELDVDETLAQLLVAEGFTALE
                     EVAYVPQEEISSIEGLDDDIATELQSRAGEALERREAAAREERRKLGVEDSLAEMPHL
                     TEQMLVTLGKAGIKTLDDLADLATDELVQKRRVEPRRRSDAPVRNEDKGGILADFGLS
                     EEQGNEIIMAARAHWFEDETDSADKPEEAADAEPSK"
     gene            complement(5083..5610)
                     /gene="rimP"
                     /locus_tag="VHN55_09420"
     CDS             complement(5083..5610)
                     /gene="rimP"
                     /locus_tag="VHN55_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010126218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation protein RimP"
                     /protein_id="HEX2804179.1"
                     /translation="MADIAALTRLIEPELKSLGFDLVRVAMIGGTSDPTLQVMAERPD
                     TRQLVLSDCETISRRLSELLDEKDPIEGSYRLEVSSPGIDRPLTRLRDYDDWSGHEAR
                     ITLAEPQGGRKQFSGTLRGTGEGSVVHVLGKDGKDYVVPFASIASAKLLLTDDLIEST
                     KPLSTEGADLIKTEG"
     gene            complement(5737..6222)
                     /locus_tag="VHN55_09425"
     CDS             complement(5737..6222)
                     /locus_tag="VHN55_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019368167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006481 - C-terminal protein methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX2804180.1"
                     /translation="MTWAIAILAYVTIERLAELLLARANTRRLLAKGAREHGARHYPL
                     IVGLHLLWLVTLWVLAPGRGIDPFWLAMYVALQAARIWVIATLGPSWTTRIIVHPDQP
                     LVREGPYRFVAHPNYWVVIGEIAVLPLVFGLPWVALVFTILNAAVLAIRIREENRALG
                     R"
     gene            complement(6219..7265)
                     /locus_tag="VHN55_09430"
     CDS             complement(6219..7265)
                     /locus_tag="VHN55_09430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008994370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III polyketide synthase"
                     /protein_id="HEX2804181.1"
                     /translation="MQPCSLLSLATAVPPHVVVQEDAKSLARKAWGGRPNLFEKLSTV
                     FDNAGIAKRHLVAPPEWYERPHGWQDRNTIYLEAAENLFERVAASAIEKAGLAATDIN
                     GVVTVSTTGIATPSLEARVGPKLGLRPDVRRVPIFGLGCAGGVNGLATAARLAAAEPG
                     SNWLFVTVETCSISIRLDSDDPAAIVATALFGDGAAAAIVRSGTHCLARITGAAEKLW
                     PDTQRIMGWQVEDPGLAVIFDRAIPPFIEEHMAAAADEMLASMGSSRDEVDRLCCHPG
                     GVKVIDAIETALELPQGELNLEREVLNDYGNMSAPTVLFVLDRLIQRGLPENVMLTAF
                     GPGFTCAGLLLEAP"
     gene            7340..8464
                     /locus_tag="VHN55_09435"
     CDS             7340..8464
                     /locus_tag="VHN55_09435"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011445488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEX2804182.1"
                     /translation="MSHLVLLLFVTACGAPGPSSAQPNDNAAAAPSEATTGRPFEATP
                     VMEFSTPWAMDFLPGSGLPLTNAALVTEKEGRLWLVNVANGDKQQVSGVPDVHVAGQG
                     GLGDVVAHPDFAGNQRVYLSYVEEGPNGTSGAVVGYGRLILGQGQPRLEGFKVIWRQQ
                     PKVTGTGHFSHRIAFAADGTMFVSSGDRQKGEPAQDRSVDLGKILHMTDEGQRIGGRF
                     HTTGHRNVLGLAFAPDGRLWATEMGPQGGDEVNLIVAGRNYGWPEASYGSDYGGGPIP
                     DEHSSRGFEEPKVWWNPSVSPGSLLIYTGDKFPQWKGDALIGALSGQALIRVDIDGDK
                     ARKADQWDMGARIRAVDQGPDGLVYILEDGGRLLKLTPAR"
     gene            complement(8466..9128)
                     /locus_tag="VHN55_09440"
     CDS             complement(8466..9128)
                     /locus_tag="VHN55_09440"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2804183.1"
                     /translation="MTLSIGSTAPDFTAETTQGTINFHDWIGNGWAILFSHPKAFTPV
                     CTTELGYMAGLKDEFAKRNTKILGLSVDTSDDNKRWLPDIEEVSGNRVDYPIIGDSDL
                     NVAKLYNMLPADESGTSEGRTAATNATVRTVYIIGPDKKIRAMLLYPMSSGRNFDEVL
                     RLLDSVQLTESKGVATPVNWKRGEDVIIPPSLSDEDAKVKYPNGWDAVKPYLRRIPQP
                     AD"
     gene            complement(9139..10188)
                     /locus_tag="VHN55_09445"
     CDS             complement(9139..10188)
                     /locus_tag="VHN55_09445"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX2804184.1"
                     /translation="MQIRDTVLDAIGNTPLIKLRRASEETGCTILGKAEFMNPGQSVK
                     DRAALSIVRQAIDNGQLRPGGIIVDGTAGNTGIGLTVVGNALGMRTVIVIPETQTEEK
                     KTALRLLGATLIEVPAVPYKNPNNYIKVAGRLAERLAKEDEHGAIFANQFDNTANRDA
                     HVKTTGPEIWDQTGGKVDAFVSAVGTGGTLAGAAMALRERKADVTIALADVPGAALFN
                     YYTAGELRAEGSSITEGIGQGRITANLEGLTVDEAFLIPDEETVRTVYSLIQYEGLAL
                     GTSSGVNVAGAIRLAKQMGPGKTIVTMLCDPATRYQSRLFNREFLNSKGLPLAPWMDQ
                     PLGIEPDFLPTDQSS"
     gene            complement(10228..10929)
                     /locus_tag="VHN55_09450"
     CDS             complement(10228..10929)
                     /locus_tag="VHN55_09450"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004212010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanine(46)-N(7))-methyltransferase TrmB"
                     /protein_id="HEX2804185.1"
                     /translation="MTAHKQGDPTTLNRLYGRSSGHKLRASQQKLVDQLLPQIEVPAE
                     GEITPLRLFGDDRPLHLEIGFGGGEHLAYRADLLPDHGFIGCEPFLNGVATALGHIRD
                     QHLANVRLWRGDALDVLRRVPDGSLAFVYLLHPDPWPKARHAKRRMVNDGPIDLIAAK
                     MKAGGELRIATDHPVYLEWALMIMQRHRHQFRWLAEKPSDFLKRPGGWPATRYEAKAG
                     REGRRAYYLRYQRCD"
     gene            11007..11411
                     /locus_tag="VHN55_09455"
     CDS             11007..11411
                     /locus_tag="VHN55_09455"
                     /inference="COORDINATES: protein motif:HMM:NF020157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HEX2804186.1"
                     /translation="MRALGINWLAVLVAAIAVYAIGFIIYGLLIPEDVNMAMSGMTEA
                     EKSIALSRMPFGVLMPILIAAFMALIFRWAQVGSAVKGMQLAALIALASAIPTVLYGW
                     VYGGLSTDMVAVDCAHLMLGHVVAGAILGGWR"
     gene            11456..11809
                     /locus_tag="VHN55_09460"
     CDS             11456..11809
                     /locus_tag="VHN55_09460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804187.1"
                     /translation="MKTFLLALPLLVLAAGPAHATGGLACRTAGADPIQVSLVIGHTA
                     VASVVGARLSHNGRDVAVKVAQSWLDPAEFRLDLTDPNALRHELRIRAKANGRYYDGS
                     LWRHGKRRWVRCREA"
     gene            11899..12369
                     /locus_tag="VHN55_09465"
     CDS             11899..12369
                     /locus_tag="VHN55_09465"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEX2804188.1"
                     /translation="MTDSDRSLRNPRSTAKIADHPIHPMLVPFPIVCFVLVFILDIVH
                     SQGETGVAEASTWLLGFGLVMAALAAIAGLTDFLGDDRIRRLGDAVKHMLANVTAVVL
                     ELVNLVLRWRDPDFIDSTGVFLSGIVVLILLYSGWKGGDLVYRHRVGVNDTSNL"
     gene            complement(12373..13641)
                     /gene="metK"
                     /locus_tag="VHN55_09470"
     CDS             complement(12373..13641)
                     /gene="metK"
                     /locus_tag="VHN55_09470"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008070022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEX2804189.1"
                     /translation="MRSSYLFTSESVSEGHPDKVADQISDAIVDLLLSKDAEARVACE
                     TFVTTQRIVIGGEIRCRPIYDEDRFKDTHGWAPGARDEIEQVVRQTVKRIGYEQDGFH
                     WQTAEFENHLHGQSEHIAQGVDAAGNKDEGAGDQGIMFGFACDETPELMPATLYYSHK
                     ILQRMADDRHSGAAPFLEPDAKSQITLRFDNGRPIEATAIVVSTQHKQGYSEKGEFAD
                     AKLYGELRDYVKKVVAEVLPGELLTENTVYHINPTGAFEIGGPDGDAGLTGRKIIVDT
                     YGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNIVAAGLARRCTIQLAYAIGVSEPL
                     SLYVNTHGTGRLDDRELEAAIGRIEKLGGLTPRGIRTHLQLNRPIYEPTAAYGHFGRQ
                     SDGDFFPWERVDLADELKAAVGTEPATAGA"
     gene            complement(13702..15228)
                     /gene="lnt"
                     /locus_tag="VHN55_09475"
     CDS             complement(13702..15228)
                     /gene="lnt"
                     /locus_tag="VHN55_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEX2804190.1"
                     /translation="MLYLLVALFTGAASAFAFEPAGLWVLMPVAFAVLLWLLWRTERL
                     RGALAIGWLFGLGQFVVGLNWIATAFTYQAAMPAWLGWVAVVLLSLYLAVFPALATGL
                     AWRIGKDNEAAMALALAGAWAITEWLRAGLFTGFAWNPAAAAMVPTPLITLSALLGTY
                     GLSALTVLLGSVIWLEIRRKWLPGVLIVLVAALLWLLPASNVPDDPLIIRPVRVVQPN
                     IGQQDKWRPEFSDAAARKMASLSNAPSGVRPRLLFWPEAAVTEPLADGRGGAASAMAA
                     FERNRAAASLEDGEYLLTGGIALISDDGTRVSGATNSIFVLGPGGKPAGQYDKAHLVP
                     YGEYLPMRSLLTPLGLSRLAPGDVDFNAGPGPRTIAIPGWGKVGLQICYEIIFSGEVV
                     DQANRPDVIFNPSNDAWFGRWGPPQHLAQARLRAAEEGLPVIRATPTGISAVIDAQGG
                     VVKQLGWRTEGVIDAYLPPKSPQPTLFARFGNLLPLVFAALLLAGAIALAGGWRYRRT
                     "
     gene            15303..15725
                     /locus_tag="VHN55_09480"
     CDS             15303..15725
                     /locus_tag="VHN55_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010234750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX2804191.1"
                     /translation="MPLPPFHLAFPVDDLAAARAFYGGLLQCPEGRSADDWVDFDFFG
                     HQIVAHLAPKTVRSRASNSVDGDDVPVPHFGIVLPIGEWKALAERLVDADVEFVIPPT
                     VRFEGEPGEQATMFLSDPAGNALEFKAMANPANLFAKG"
     gene            complement(15722..16600)
                     /locus_tag="VHN55_09485"
     CDS             complement(15722..16600)
                     /locus_tag="VHN55_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX2804192.1"
                     /translation="MATNNDDAGSRLWRGMRSLIFGDEGEQTLREEIEEAIDEADESH
                     EIAGDLTPIERQMLRNLLHFGDETAGDIAVTRGEIVAVPATIDFDELVTAFAEAEHSR
                     LPVYGESLDEIIGMVHIKDLFAAMIDKDRERSIQALLRTPLFVPESMGVIDLLARMRA
                     ERVHLAIVVDEFGGTEGLVTIEDVVEEIVGEIEDEHDVEAAGMLTRLDEGVWEADARI
                     ELEELAETVDARLIWEEDEVDTLGGLVFLLSGHIPARGESVLHPSGWRLEAVDSDPRR
                     ILRVRLHAPEAEVESG"
     gene            complement(16600..17106)
                     /gene="ybeY"
                     /locus_tag="VHN55_09490"
     CDS             complement(16600..17106)
                     /gene="ybeY"
                     /locus_tag="VHN55_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010218713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEX2804193.1"
                     /translation="MLEIDIDADPEWDSSGGWESLVRSAAEAAIAESGFPELATSQRL
                     VELSVRLTSDEQVKALNAQWRGKDKPTNVLSFPQLEPGELERDEDNGRELMLGDLVLA
                     RGVCEAEAAEKQIPFCDHAAHLLVHGTLHLLGYDHHDDQSAKAMESREIRALGRLGIA
                     DPYLVEEI"
     gene            complement(17116..18108)
                     /locus_tag="VHN55_09495"
     CDS             complement(17116..18108)
                     /locus_tag="VHN55_09495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEX2804194.1"
                     /translation="MARRDLAAVPDRTRLELDFDEPYLLGPLFGDYDRHLITIESRLG
                     VHIAARGNRVQIEGDPDSAARARDVLIGLYKRLEQGHDIDAEAVESVIGMAAQPSFDG
                     IVADEVTTPPRVMIRTRKKTIVPRSPTQTVYMEALASQDMIFALGPAGTGKTYLAVAQ
                     AVSQLISGSVDRLILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDMLPTEQVE
                     RRIASGEIEIAPIAFMRGRTLNDAFIILDEAQNTTPAQRKMFLTRFGMLSRMVICGDP
                     KQVDLPEGGRSGLHDAVERLDGVKGIAIVPFSAADVVRHPLVGRIVEAYEGPGA"
     gene            complement(18108..19421)
                     /gene="miaB"
                     /locus_tag="VHN55_09500"
     CDS             complement(18108..19421)
                     /gene="miaB"
                     /locus_tag="VHN55_09500"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX2804195.1"
                     /translation="MNAPPKTFRIKSFGCQMNVYDGERMAELLDEQGLAAAAEGEDAD
                     LVVLNTCHIREKAAEKAYSDVGRLRREDGSRPMIALAGCVAQAEGAEAKRRSPMIDMV
                     VGPQAYHRLPEMIAATARGARPVDTDMPSISKFNSLPKRRRAAPSAFLTIQEGCDKFC
                     TYCVVPYTRGAEISRPWNDIVAEAQALVDGGAKEIVLLGQNVNAWMNDGRGLAALIRE
                     IARIDGLERIRYTTSHPADMTYDLISAHGEVEKLMPYLHLPVQSGSDRVLKAMNRSHT
                     SGSYLRTIERVRAARPDIAISGDFIVGFPGETEEEFEATLRIVDEVGYASAYSFKYSA
                     RPGTPAAAMDEQVPREIMDDRLQRLQSRIAEHQLAFNRSTVGRDTRILIERPGRRTGQ
                     MIGRSPWLQSVHVDSDAEAGTMLEVTLTAAGPNSMTGALRQKEAA"
     gene            complement(19430..20155)
                     /locus_tag="VHN55_09505"
     CDS             complement(19430..20155)
                     /locus_tag="VHN55_09505"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEX2804196.1"
                     /translation="MAIAALRIAALVLLFAVCPPIHIVTRALSGDSPWPPRFLAAAAW
                     ICGARVRVEGKPLRPHTLMICNHTSWLDILVLGGATGCAFVSKDELGHGLIHWMADQG
                     PTLYIRREDRRGASNQAKQVAEALRYPQPLALFPEGTTGPGTHLLPFRSTLFAAVAPA
                     PPRVQVRPVAIDYGDAAPELGWHGESGRQNVLRTLGRTRAVEVIVRLLDPLDPTGDRK
                     ALAHSAREAIATALSSSPGSAHL"
     gene            complement(20166..20594)
                     /locus_tag="VHN55_09510"
     CDS             complement(20166..20594)
                     /locus_tag="VHN55_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX2804197.1"
                     /translation="MSHAVIDIEALCADKGLRITEQRRVIARILSESEDHPDVETLHE
                     RASAVDPRISIATVYRTVRLFEEAGILERHEFGDGRARYEAASDEHHDHLIDVETGNV
                     VEFADEELEELQKQIAERLGFRLVDHRMELYGVALDRKRQ"
     gene            complement(20664..21089)
                     /locus_tag="VHN55_09515"
     CDS             complement(20664..21089)
                     /locus_tag="VHN55_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HEX2804198.1"
                     /translation="MAENGAAEDSLLTLTADIVAAHVSNNSVAVSDLPNLIQNVHQAL
                     TGISGPGSAAEEKQEPKVSIRSSVKPDYVTCLECGKKQKMLKRHLMTNHELTPAEYRQ
                     KWGLSSDYPMVAPNYAEQRRTLAKSIGLGTKRRRTRKSK"
     gene            complement(21201..21665)
                     /gene="rimI"
                     /locus_tag="VHN55_09520"
     CDS             complement(21201..21665)
                     /gene="rimI"
                     /locus_tag="VHN55_09520"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019517063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEX2804199.1"
                     /translation="MTVELVDGGADDLDDVMRVMAAAFADRYGEAWTRSQCAGILPMT
                     GVRLVLARDEERVVGFALFRTVADDSELLLIAVDPAAQGRGVGRELLSHFIGHSRTNG
                     AERIHLEVRDGNPAIEIYKSAGFAQANRRRNYYRGRGGGEFDALTFVLAVEN"
     gene            complement(21662..22270)
                     /gene="tsaB"
                     /locus_tag="VHN55_09525"
     CDS             complement(21662..22270)
                     /gene="tsaB"
                     /locus_tag="VHN55_09525"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEX2804200.1"
                     /translation="MITLAIDTSTAACTAALFDGGRCVAQADELIGRGHAERLAPMLD
                     ELLDGRNADAILVGVGPGSFTGIRVGLAAASGLAIGWNSKLRGLSSLALLAASAGASG
                     EVAVAMIGGHGELFVQQFHGALRPAGELLNLPPDRAAAEITAGLVVGPGAQALVDARG
                     HGKAMDGWPSASLALTLPEQLRTLPPVPVYARAPDATARSAA"
     gene            complement(22313..22885)
                     /locus_tag="VHN55_09530"
     CDS             complement(22313..22885)
                     /locus_tag="VHN55_09530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEX2804201.1"
                     /translation="MLIRTEHTPNPSTRKFLPGQAVMESGTRDFPDAESAEASPLAEA
                     LFNTQMVEGVFFGRDFVSVTAAPGVDWPLLEPEVVSILLDHFVTGAPLFKAGTAAGIQ
                     VAPESAIEEDPADSEIIEQIKELIDTRVRPAVAQDGGDIIYKGYRDGRLYLGMQGACQ
                     GCPSSAVTLKRGIESLIKHYVPEVESVEAI"
     gene            complement(22932..23618)
                     /locus_tag="VHN55_09535"
     CDS             complement(22932..23618)
                     /locus_tag="VHN55_09535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010338469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX2804202.1"
                     /translation="MPRSLPGSGERLIKQRVWDLPTRLFHWSLVVLVGLSWWSAETHR
                     YDLHLWFGYGVLFLLLFRILWGFVGSSTARFATFVRGPAALFTYFRNRFRWTVAGHTP
                     LGALSVLALLLMLVVIVGTGLVALDEDGLAGGPLAHLVSLATSDAATELHEELFDFLL
                     ILIGLHIAAILLYRLALGLNLLGPMITGKAELAPGVEPMRQVPPPVVIASVAVALALT
                     AWIVAGAPPL"
     gene            complement(23582..24121)
                     /locus_tag="VHN55_09540"
     CDS             complement(23582..24121)
                     /locus_tag="VHN55_09540"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX2804203.1"
                     /translation="MAGKTLYGLCALALLAGCDARQHGNEANTVMPSAETHNAATAAS
                     EPLAKDQALALMKERHEHMEALGDATKAINRQLKSSAPDLAVIRQSAAKIESLAPDLH
                     SWFPDGTGPDVGKTRAKAELWQKPEDFAAKAQDFRSASAAFDAAAKSGDLSEINASFA
                     AMGKSCKACHDLYRAPEKD"
     gene            complement(24121..25020)
                     /gene="mmsB"
                     /locus_tag="VHN55_09545"
     CDS             complement(24121..25020)
                     /gene="mmsB"
                     /locus_tag="VHN55_09545"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008442 - 3-hydroxyisobutyrate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HEX2804204.1"
                     /translation="MARIAFIGLGHMGGGMAPNLVKAGHEVLAFDLSEEALSKACEQG
                     CARAGSAEEAVKDAEVVITMLPAASHVLDVYRNHVLGNAPTSALLIDCSTIDVGSART
                     VEEEASAKGYEMVDAPVSGGIAAAAGGTLAFMVGGSDDAFAKAQPILDPMAKAVIHAG
                     GAGAGQAAKICNNMILGATMVVTCEAFVLAQKLGLDPQVFYDISSQASGQSWSMTSYC
                     PVPGVGPKTPADNDYEGGFAAALMLKDLKLAMEAAEQVGLELEMGEEAEEEYEKFVER
                     GGGSKDFSGIIKMIDDSWKAEGQ"
     gene            complement(25022..25801)
                     /locus_tag="VHN55_09550"
     CDS             complement(25022..25801)
                     /locus_tag="VHN55_09550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX2804205.1"
                     /translation="MTDYTTVLVEKRGPVTLVTLNRPQALNALNSEVLKELIEVFAAY
                     DADESQRCLVLTGSGEKAFAAGADIKEMQPQGFADMYSSNFFAGWEKVTATRKPWIAA
                     VNGFALGGGCEVAMMADFIIASENAKFGQPEIKLGVTPGMGGSQRLTWAIGKAKAMEM
                     CLTGRMMDAAEAEQSGLVAKVVPAEQLLDEAMKTAEAIAAMPPLAAIAVKEMVNAAFE
                     MPLNQGIIFERRLFHGLFGTEDQKEGMTAFVEKRPGNWKGR"
     gene            complement(25798..26856)
                     /locus_tag="VHN55_09555"
     CDS             complement(25798..26856)
                     /locus_tag="VHN55_09555"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX2804206.1"
                     /translation="MTGDVLISAERGVGRIRLNRPKAIHALTTQMCEAMSAALLRWRT
                     DSNIQCVVIDHAVGRGFCAGGDVVTLAKSGAGDGRKAREFFFAEYRLNHLLFTYDKPT
                     VAIMDGITMGGGVGISQPCTFRVATENTRLAMPETGIGLFPDVGGGWYLSRLPGRVGQ
                     FMALTGARLDGAECAYLGLATHYVASSGVEELVDRIHKSPDRVKGALGAASESPPDAR
                     IADNAAAINRLFASDQLEDVLDALETDGSEWAEKELVTLRTKSPLSCKVSLRLLAEGA
                     GRSTFADEMRAEYALAGRVVRTHDFKEGVNAVLIEKHNEPQWDPPIAEGVTDEMLDEL
                     FAPLPASEQWTPFPETSE"
     gene            complement(26870..28012)
                     /locus_tag="VHN55_09560"
     CDS             complement(26870..28012)
                     /locus_tag="VHN55_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2804207.1"
                     /translation="MHQFELTDDQLQIQEMARKFTADAISPVAAEWDEKHILPKDVIR
                     EAAELGFGAIYVSEESGGIGLGRLEAALIMEAMAYGCPSTSAFISIHNMAAWMIDRFG
                     SDDVKQKYLPSMIPMERMGSYCLTEPSSGSDAAALKTKAVLDGDHYVVSGSKAFISGG
                     GENEIYVTMVRTGEEGPKGITALVIEKDMKGVSFGAQEKKLGWHSQPTCQVNFDEVRV
                     PVANRVGAEGEGFRIAMMGLDGGRLNIGACSLGGAQRCLDEAIAYTKDRKQFDQRIAD
                     FQNTQFMLADMETELQAARYLLYVAAAKVTANAPDKTRFAAMAKRLATDTGSSVVDRA
                     LQLHGGYGYLMDYPIERFWRDLRVHSILEGTNQIMRVIVSRDLLRQ"
     gene            complement(28074..28364)
                     /locus_tag="VHN55_09565"
     CDS             complement(28074..28364)
                     /locus_tag="VHN55_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804208.1"
                     /translation="MPAALHGRWGLTPGDCTSTRGDAKGLLVVTADRLQFYESRAVPA
                     GDVDVSPDSISGDFSFAGEGQEWTKHLSLELQDKKLVRTERDPNASFTYARC"
     gene            complement(28632..30128)
                     /locus_tag="VHN55_09570"
     CDS             complement(28632..30128)
                     /locus_tag="VHN55_09570"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006833305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX2804209.1"
                     /translation="MRDIDHFIAGEAYQSSGRSGDVFDPNRGEVQAKVKLGTADELQR
                     AVDAAKAAQPAWAATNPQRRARVMFKYKELVEAHMDELAELLSSEHGKVIADSRGDVQ
                     RGLEVIEYCCGIPQALKGEYTQGAGPGIDVYSMRQPLGIGAGITPFNFPAMIPMWMFG
                     MAIACGNAFVLKPSERDPSVPIRLAELMKEAGLPDGILNVVHGDKEMVDAILDHEDIK
                     AVSFVGSSDIAQYIYSRGTANGKRVQAFGGAKNHGIVMPDADLDQVVNDIAGAAFGSA
                     GERCMALPVVVPVGDDTATRLREKLIPAIRALRVGVSTDSEAHYGPVVSQAHKERIEH
                     YIQMCEDEGGELVVDGRGFSLQGNEKGFFIGPTFFDHVKPSFQSYKDEIFGPVLQMVR
                     AKDFEEAVRLPSEHEYGNGVAIFTRNGHAAREFTNRVNVGMVGVNVPIPVPVSYHSFG
                     GWKRSGFGDIGQYGQEGLRFWTKNKVVTQRWPDGSVTGENAFVIPTMG"
     gene            30253..31188
                     /locus_tag="VHN55_09575"
     CDS             30253..31188
                     /locus_tag="VHN55_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX2804210.1"
                     /translation="MRERSFSTDRPAEQRPLAGVALRLLTALLLAIMFALVKLAASRG
                     VNLVETLFYRQCGSAVCAVALVAFGPGFDSLRTKRVWAHVGRMALGLIAMALNFVAFI
                     LLPLAEATSIGFSVPIFSVVLAALLLGEPTGKWRWGAVAAGFVGVLLIVQPGSGHVPL
                     LGASVALAAALLTASVTIVIRRLGATERAATTVFWFAVSSLVPLGLMMIHFAGPHDAL
                     TWLLLAGLAVAGGLAQLTLTGALRLAPVALVMPMDYTSLLWATLLGAWIFGALPGPWT
                     WMGAPIIIASGLVIVWREHRLHRRAALSAGTAVPS"
     gene            31209..31472
                     /locus_tag="VHN55_09580"
     CDS             31209..31472
                     /locus_tag="VHN55_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010411303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DksA/TraR family C4-type zinc finger protein"
                     /protein_id="HEX2804211.1"
                     /translation="MAGGWTRDGAVQDQIDDTVKDAVLRARALTPKGESATECDDCGE
                     PIPKKRRDALPGVRTCVACQGKRDKAVVHSTINRRGSKDSQLR"
     gene            31492..33774
                     /gene="rnr"
                     /locus_tag="VHN55_09585"
     CDS             31492..33774
                     /gene="rnr"
                     /locus_tag="VHN55_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017977479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEX2804212.1"
                     /translation="MARKQPIGLPTRKQILDFVASSDQPAGKREIARAFGLKGNEKIE
                     LKRLLKEMAEEGLIDSSPGRAFHKAGGVPKVTVLKVTEADDSGNIFAVPEHWEAETPA
                     PKLRVIEKGRKSALGIGDRILARTEERGKGHVAHPMKKLASKAELVLGVIREDGGRYW
                     LTPVEKKERRELPVTDLDDAEAGDLVLCEVSGRGPRVSARVDAVLGDPFAPKSFSLIA
                     IHKYELPHEFSDAVIDEAHRVAAQPLGEREDLTHLPIVAIDPADARDHDDAIWAEADG
                     DSDNKGGWNAIVAIADVSFYVRPGSALDKSARARGNSVYFPDRVVPMLPEELSADICS
                     LKAGKQRAAMACHLKVAKDGTLKSWRFSRAKICVAANIAYEDAQTAIDAAGEERVEVS
                     SPTCSMPEVEGPVSSELVDKALKPLWACWRALLAARKKRGPLELDLPERQVVLDEKGR
                     IQSVAARERLDAHRLVEDYMIAANVAAARALEARKAPVMYRVHEPPSREKLTALKDYL
                     DTFDIPFTLGQVIKPETFNRIIERIGDSDFQPEIMEQLLRTQMQARYGPERLGHFGLA
                     LATYAHFTSPIRRYADLLVHRALVSAYKLGEGGLPGEDAAKFDEIGEQISRLERRAME
                     AERETVDRYVAAFLADQVGQVVLCRITGVQPFGFFATLVDFGGDGIVPVSTIGDEYFR
                     YDEKTQQLVGEDTGTSYRMGQKLKLRIVESNPVTGGLRFALPVDEGQDDRAERRRDRV
                     HRPQQKRGRPANIRHKSRRR"
     gene            33831..34451
                     /locus_tag="VHN55_09590"
     CDS             33831..34451
                     /locus_tag="VHN55_09590"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006833880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HEX2804213.1"
                     /translation="MAYKIAILVGSLREDSINRKIARSICAFRDDNLDCEMVEIGNLP
                     LYNQDSDANPPPEYVKFRDQIRAADGVLFVTPEYNRSVPGVLKNAIDIGSRPYGQSVF
                     DKKPAAIITASPGAIGGFGANHHLRQSCVFLNMPMMLQPEAYLGNVSDDSFDESGCLK
                     EGPLKDVVIKLSHAFSDWVEMIQRSRELLAEDAAHSKESEREPESV"
     gene            complement(34455..35009)
                     /gene="dcd"
                     /locus_tag="VHN55_09595"
     CDS             complement(34455..35009)
                     /gene="dcd"
                     /locus_tag="VHN55_09595"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEX2804214.1"
                     /translation="MPILSDRWIREQAQDNGMIEPFVEAQRREGCISYGLSSYGYDAR
                     VSNHFKIFTNVDSATVDPKDFAANSFVDRTTDVCIIPPNSFALAHTVEYFRVPRDVMV
                     ICLGKSTYARCGIIVNVTPLEPGWEGHVTLEFSNTTPLPAKVYANEGACQFLFLQGNE
                     PCEVSYADRAGKYMGQQGVTLPKL"
     gene            35133..>35537
                     /locus_tag="VHN55_09600"
     CDS             35133..>35537
                     /locus_tag="VHN55_09600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010339984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /protein_id="HEX2804215.1"
                     /translation="MAEVVRISEPAQTAGTPSLPANVEAEAALLGALMLDNRLVEDVG
                     LKLKPHHFHEELHARIYGAILKLTDKNMVANPVTLRPMFEADEAMKEVGGAGYLGKLT
                     GSGAALIAAKDFAQQIYDLALLRALIGVGRELV"
BASE COUNT         5835 a        11375 c        11799 g         6528 t
ORIGIN      
        1 ggtgatgctg acaaggtggc tctgcagcgt ttgatcgtgg acgtcgccgc gctggagcag
       61 ttcgctcagc acgtggcgca cctgctcgcc gacacggagc agacggacgc tgcggccttc
      121 gggggtttcg gtgcggcgca tgggctcagt ccctcccctt gatggggagg gggtggggtg
      181 gggtgatgta tccggaaaag gcggcttgct tcattgacct caccctcacc caaccctctc
      241 ccatcgaggg agagggctaa agttacagag ttctcgcccg ctcctcgacc tcgaacacct
      301 cgaggctgtc acccggtttg atgtcgttgg tgtcggcaag cagcacaccg cactcctggc
      361 cagacgtgac ttcggaaacg tcgtccttga accgccggag cgacgagatc gtcgtcttcg
      421 agacgatgac gtcctcgcgc gtgaggcggg cgttgaggcc cttgcggatg atgccttcca
      481 gcacaagcaa gccggccgcc ttgtccttct tgccggccgg gaacacctcg cggacctcgg
      541 cacggccgac caccgtctcg ataatctcgg ggccgagctc gccggccatc gcgcccttca
      601 cccagtcggt gagatggtag atgacgtcgt agtagcggaa ctcgactttg ttgcgctggg
      661 caacctcgcg ggccttggcg ttcggccgga cattgaatcc gatgattggc gctccgctgg
      721 cgcccgccag cgtaacgtcg ctttcggtga tcgcgccaac gcccgagtga agcacccgga
      781 ccttgatctc gtcggtggaa agccggttga gggcatggac gatcgcctcg agcgagccgt
      841 ggacgtccgc cttgatgacg agcggaagct ccttggtcgt cgaggcgtgg cttgcgaaca
      901 tattctcgag gctgaccggg gcagcggtcg tgcgcttcct gtcgagaacg ccctggcggt
      961 aggtcgcgac ctcgcgggcg cgagcctcgt tttcgacgac cgtgaacgga tcgcccgccg
     1021 acggcaccgc cgacaggccg aggacctcga ccgggacgga cggcccggct tccttcacct
     1081 ggcggccctt gtcgtcgacg agggcacgga ccttgccgct cgatgcgccc gcgacgaaga
     1141 cgtcgccgac gcgcagggtg ccgcgctgga cgagcacggt tgcgagcggg ccgcggccct
     1201 tgtcgagctt cgcctcgacg atcgtgcctt cggccgcccg gtcgggattg gccttgagct
     1261 cgaggatttc tgactgcagc tggatcgcct cgagaagctt gtcgaggttg gtcttctgga
     1321 ccgcggagac ttcgacgtcc tgcacgtcgc cccccatctg ctcgacgatt acctcgtgct
     1381 ggagaagctc ctcgcgcacc ttctgtggct tggcctccgg cttgtcgatc ttgttgatcg
     1441 cgacgatcat cggcacgccc gcggccttgg tgtggttgat cgcttcgatc gtctgcggtt
     1501 tcagcccgtc atcggcagcg acaacgagga tgacgatatc cgtgacgttg gcgccgcggg
     1561 cacgcatttc cgtgaacgcc tcgtggcccg gagtgtcgag gaagctgatc ttcgacttgt
     1621 cgggcagggt cacctggtag gcgccgatat gctgggtgat tccgccagcc tcgccggaaa
     1681 cgacgtcggc gccgcggatc gcgtcgagaa gcgaggtctt gccgtggtcg acatggccca
     1741 tgatcgtgac caccgccggt cgcggcttga gggtctcggg cgcatcttct tcgccgccga
     1801 tgccaagctc gatgtcggcc tcgctgacgc gcttgatgtt atgcccgaac tcggtgacga
     1861 gaagctcggc ggtgtcctga tcgatcgtct gggtcagagt gaccggcatg cccatcttga
     1921 agagcgcctt gacgaggtcg gctcctcgct cggccatccg gttggcgagc tcctgaacgg
     1981 tgatcgcttc gggaacgacg acatcccgga cctgcttctg ggcgggcccg gactcctgat
     2041 gggctcgctt ttccttttcg cgggcgcggc ggagcgcggc aagcgagcgg gcgcgactgt
     2101 cgtcctcgcc ggcgagggct cggctgacgg tgagcttgcc gcggtggcga tgctcttcgc
     2161 gcccgcgtga cgggcgggcc ggttcggggc gctttgccgc aggcgcggcg ccgtggcggc
     2221 ggggagcgcg gccgtcctct tcctctgccg cgggctcggc cgcggccgcc tgcgaagccg
     2281 cctctgcggc cgcttgagcc tcttcctcgg cctggcggcg cgcttcttcg gcggccgcct
     2341 cttcggcctt tcggttttcg tcggcgcggc ggcgctcgtc ctcggtctgc tcgaccttgg
     2401 cctgctcttc gcggcggcgc gcttcctcgg actgccggag ccggtcctct tcggcttcgc
     2461 gaagcaggcg ctcctgcatt tccttgcgct tggccatctc gtcgatgggc gccgagcggg
     2521 cagggcgagc cgggggcgcc ttgggcgccg gcttcttcgc ttcgaccttg ggcgcttcgg
     2581 cctccggctc gggagtcttc ggcggctcgg gggtttcccc gggcttgccg aggatccggc
     2641 gcttcttgac ctcgacgacg accgtgttcg accggccatg gctgaagctt tgcttcacct
     2701 tgccggtttc gaccgtgcgc ttgatcccga gcggagctcg cgctccaagc ttcggtttgt
     2761 cggtctggtc gttcattctg ttccttcaac ttcttcagcc gagccgattc cggaggcggg
     2821 atcgccgcct tccaggccgg catcggggtc aatgaattcg cgccaccggg cgagcgcttg
     2881 gcttacgcgc gccgcggcag cgggttcgat caaggcgaga tgtaccacat tttcccgccc
     2941 caaggctaat gacaagatag tgcggtcgac cgggattatc accccccggg gctggcctcc
     3001 gccgacccgc caggcctggt cgagcttctt gcgcccgtct tcgccagcgt cggcggcgtg
     3061 gaccagcaag tgaaccttgc cggcgcgggc cgcagtttcg acgcgatcgg agccgttggc
     3121 caggttgccc gagcgcgctt ccatcccgag gcggtcgagg acagcctggc ggagggcatc
     3181 agcggttcga tcggcgaggt cgggtgggac ttcgagggcc ccggtcttga acgcgcgctg
     3241 gagcgcgccc ttcagcctgc cgttggcgac tgcttcggcg agctgcgcct ttcccaccga
     3301 aatccaggcg cctcggcccg gcgcacgggc gcggacgtcc ggagcgacgc ttccgtcagg
     3361 accgagcgcg agccggatca gcttgtcgcg cgtgcctttg cgccgggtca ggacgcaggt
     3421 gcgttcagct accttggccg gatcatttgg agggttccgc atcggcggcc tcctcgggct
     3481 tgtcggcgct gtcggtctcg tcctcgaacc agtgcgcgcg ggcggccatg atgatctcgt
     3541 tgccctgctc ctcgctgagg ccgaaatcgg cgaggatccc gcctttgtcc tcgttgcgga
     3601 ccggggcatc ggagcggcgg cgcggctcga cccggcgctt ctgcaccagc tcgtcggtag
     3661 caaggtcggc gagatcgtcg agcgtcttga ttcccgcctt gccgagcgtg acgagcatct
     3721 gctccgtcag gtgcggcatt tcggcgagcg aatcctcgac cccgagcttg cggcgctcct
     3781 cgcgggcagc ggcctcgcgg cgctcgagcg cttcgccggc acggctctga agctcggtcg
     3841 cgatgtcgtc gtcgaggccc tcgatcgagc tgatctcttc ctgcggcacg taggcgactt
     3901 cctcgagagc ggtgaagcct tcggcgacga gcagctgggc gagggtctcg tcgacgtcga
     3961 gctcctcctg gaacatcgtc gatcgctcga cgaactcgcg ctggcgcttc tcgctcgcgt
     4021 cggcctcggt gaggatgtcg atctgcgagt tgctgagctg gcttgcgagc cggacgttct
     4081 ggccccgacg gccgatcgcc aggctgagct ggtcatcggg gacgacgact tcgatgcggc
     4141 tttcctcctc gtcgatgacg acccggctga cggtcgccgg ctggagcgca ttgacgacga
     4201 aggtcgccag atcctcggac caggggatga tgtcgatctt ctcgccctgg agctcctgga
     4261 cgacggcctg cacgcggcta cccttcattc cgacgcaggc gccgaccggg tcgatcgagc
     4321 tgtcgtggct gatcacgccg atcttggcgc gactgccggg gtcgcgggcg gcggccttga
     4381 tctcgatgat cccgtcgtaa atctcgggca cttcctgggc gaacagcttc ttcatgaagt
     4441 cgggatgggc gcgcgacagg aagatctgcg gacctcgcgc ttcgcggctg actcggagga
     4501 tcagcgagcg gatccggtcg ccgacgcgga ccatctcgcg cgggatctgc tggtcgcggc
     4561 ggatcactcc ctcggcgcgg ccgaggtcga cgacgacgtg gccgaactcg acccgcttga
     4621 cgactccggt gatgatctcg ccggcgcgat ccttgaactc ctcgaactgg cgctcgcgct
     4681 cggcgtcgcg gaccttctgg aagatcacct gcttggcggc ctgggcggcg attcggccga
     4741 actcgatcgg cggcagcggg tcgacgatga agtcgccgag cttggcaccc ttctggagct
     4801 tctgcgcgcc cttgaggtcg acctgcttga aatgatcctc gggctcctcg acgacttcga
     4861 gcacccgcca caggcgaagg tcgccggttt cggggtcgag cttcgcgcgg atgtcgttct
     4921 cggcgccgta gcgggctcga gccgcgcgct ggatcgcgtc ctccatcgcc tcgatgacga
     4981 tgcctttgtc gatcagcttc tcgcgagcga ctgcatcggc gatggcgagc agttcggcct
     5041 tgtttgcagt cggtgccgct ggtgctgcgg tagccatggg tcttaacctt ccgtcttgat
     5101 caggtccgcc ccttcggtgc tgagcggttt ggtggattcg atgagatcgt cggtaagcag
     5161 gagcttggcc gacgcaatgg aggcgaacgg cacgacatag tccttgccgt ccttgccgag
     5221 gacgtggacc acagaacctt cgccggtgcc gcgcaaggtc cccgaaaact gctttcgccc
     5281 gccctgcggc tcggcgagtg tgatgcgcgc ctcgtggccg gaccagtcgt cataatccct
     5341 gagccgggtc agcggccggt cgatcccggg cgagctgacc tccagccggt acgagccttc
     5401 gatcgggtcc ttctcgtcga gcagctcgga cagccggcgc gagattgttt cgcagtcgct
     5461 caggaccaac tggcgggtgt cgggccgctc ggccatcacc tgcagcgtcg ggtcggacgt
     5521 gccgccgatc atcgccacgc gcaccagatc gaagccgagg ctcttgagct cgggctcgat
     5581 caaccgtgtc agtgccgcaa tgtcagccat cgctgtcctg cttgaaacca aatgcctctc
     5641 gggaccggag ccgagggtgg ccccagcctc agcatcaatt acgatgtcga ggagtgagcg
     5701 gcgatatagg cttgtcgagg acgacgcgca agcggttcag cgacccagcg cgcggttctc
     5761 ctcgcggatc cggatggcga ggacggcggc gttgaggatg gtgaagacaa gcgccaccca
     5821 cggaagcccg aagacgagcg ggagcaccgc gatttcaccg atcacgaccc agtaattggg
     5881 gtgagcgacg aaacggtacg gcccctcccg aaccagcggc tggtcggggt ggacgatgat
     5941 ccgggtcgtc cagctcgggc cgagcgtggc gatgacccag atccgcgccg cctgcagggc
     6001 cacgtacatc gcaagccaga aggggtcgat gccgcgcccc ggcgcgagga cccacagcgt
     6061 gaccagccac aggagatgga ggccgacgat cagcgggtag tggcgggcgc catgctcacg
     6121 cgcgcctttg gcaagaagcc gcctggtgtt tgcccgggcg agcagcagct ctgccagccg
     6181 ctcgatcgta acgtaagcga ggattgcgat tgcccaggtc atggcgcttc caatagcagt
     6241 cccgcacagg tgaagcccgg cccgaacgct gtcagcataa cgttttccgg gagtccgcgc
     6301 tggatcagcc ggtcgagcac gaacagcacc gtcggagcgc tcatgttgcc gtagtcgttg
     6361 agcacctcgc gctcgaggtt gagctcgcct tgcggaagct cgagcgcggt ttctattgcg
     6421 tcgatcacct tcactccgcc gggatgacag cagaggcggt cgacctcgtc gcggctgctt
     6481 cccatcgagg cgagcatttc gtcggcggca gcggccatat gctcctcgat gaagggcggg
     6541 atggcgcggt cgaagatgac cgcgagccca ggatcctcca cctgccaacc catgatccgc
     6601 tgagtgtcgg gccagagctt ttccgcggcg ccggtaatgc gcgcgaggca atgcgtcccg
     6661 ctgcgaacga tcgccgccgc cgcgccgtcg ccgaacaagg cggtggcgac gattgcggcg
     6721 gggtcgtcgc tgtcgaggcg gatcgagatc gaacaggtct cgacggttac gaacagccaa
     6781 ttcgaccccg gctcggccgc ggcaaggcgg gccgcggtgg caagtccatt gaccccgccg
     6841 gcgcagccga ggccgaagat cggaacgcgg cggacgtcgg gcctgaggcc gagcttcggg
     6901 ccaacccgcg cttcgaggct gggagtggca atgccggtgg tcgagacggt gacgactccg
     6961 ttgatatcgg tggccgcaag cccggccttt tcgattgccg aagcggcaac gcgctcgaac
     7021 aaattctcgg ctgcttccag atagatggtg ttccggtcct gccagccgtg cggccgttcg
     7081 taccattcgg gcggggcgac gaggtgacgc tttgcaattc cggcgttgtc gaagacggtg
     7141 gacagcttct cgaagaggtt agggcgcccg ccccacgcct tgcgagcaag ggactttgcg
     7201 tcctcttgca cgacgacatg aggcggaacg gcggtggcca gcgaaaggag gctgcacggt
     7261 tgcatgttgg cgacctatag acagcggtga cagtctcaag ttccctcgcg ccgaccggag
     7321 agttcagatg aatcgccgca tgtcgcatct cgttctgttg cttttcgtga ccgcctgcgg
     7381 cgcgcccgga ccgtcttcgg cgcagccgaa tgacaatgcg gccgctgcgc cctcggaggc
     7441 gacgacgggc cgtccgttcg aggcgacccc ggtgatggag ttcagcacgc catgggcaat
     7501 ggacttcctg cccgggagcg ggctgccgct gacaaacgcg gcgctggtca ccgagaaaga
     7561 ggggcggctg tggctcgtca acgtcgccaa cggcgacaag cagcaggtct cgggtgttcc
     7621 ggatgtccat gtggcggggc agggcggtct cggcgacgtc gtcgcccacc ccgatttcgc
     7681 cggcaaccag cgcgtctatc tcagctatgt ggaagagggg ccgaacggca ctagcggggc
     7741 agtcgtcggc tacggcaggc ttattctcgg ccaaggccaa ccgcggctgg aaggattcaa
     7801 ggtcatctgg cgccagcagc cgaaagtgac cggcaccggc catttctcgc accgcatcgc
     7861 cttcgcggct gacgggacga tgttcgtctc gtccggcgat cgccagaaag gcgagccggc
     7921 gcaggacagg agcgtcgatc tcggcaagat ccttcatatg accgacgagg ggcaaagaat
     7981 tggcggtcgc ttccacacca cgggccaccg aaacgtcctg gggctcgcat tcgcgcccga
     8041 tggccgtctg tgggcgacgg agatgggacc gcaaggcggc gacgaggtta atttgatcgt
     8101 cgccggccgc aactatggct ggccggaggc ctcatacggg agcgactatg gcggcgggcc
     8161 tatacccgac gagcattcca gccgcggctt cgaagagccg aaggtctggt ggaacccgtc
     8221 ggtctcgccg ggctcgcttc tgatctacac gggcgacaaa tttccgcagt ggaagggcga
     8281 cgcactgatc ggcgcgctgt ctggtcaggc cctgatccgg gtcgatatcg atggcgacaa
     8341 ggctaggaag gccgaccagt gggatatggg cgcgcggatc cgggcggtcg accaggggcc
     8401 ggacggcttg gtctatatcc tcgaggacgg cgggcgcctg ctgaagctga cgcccgcgcg
     8461 ctgacttaat cggccggttg cggaatccgg cgcaggtacg gcttaaccgc gtcccagccg
     8521 ttcggatatt tcactttggc gtcttcgtcg ctgaggctcg gcggaatgat gacgtcctcg
     8581 ccgcgcttcc agttgaccgg cgttgcaacg cccttggact cggtcagctg gacgctgtcg
     8641 agcagcctca ggacctcgtc gaaattgcgc ccgctcgaca tcgggtagag cagcattgcg
     8701 cggatcttct tgtcgggacc gatgatgtag accgtacgga cagtcgcatt ggtggcggcg
     8761 gtgcgtccct cactggttcc gctctcgtcg gctggaagca tgttgtagag cttggcgaca
     8821 ttcaaatcgc tgtcgccgat gatcggataa tcgaccctgt tgccgctaac ttcctcgatg
     8881 tccgggagcc agcgcttgtt gtcgtcgctg gtgtcgaccg agaggcctag gatcttcgtg
     8941 ttacgcttgg cgaactcgtc cttgaggccg gccatgtagc cgagctcagt cgtgcacacc
     9001 ggagtgaagg ccttcgggtg cgagaacagg atcgcccagc cattgccgat ccagtcgtgg
     9061 aagttgatcg taccctgagt ggtctcggcg gtgaaatcgg gggcggtact gccgatggaa
     9121 agcgtcattg cggttctcct aggaggattg gtcggtggga agaaagtcgg gttcgatgcc
     9181 gaggggctgg tccatccatg gcgccaacgg cagacccttc gagttgagga actcgcggtt
     9241 gaacagccgc gactggtagc gcgtggcggg gtcgcacagc atggtgacga tggtctttcc
     9301 cgggcccatc tgcttcgcga ggcgaatggc cccggcgaca ttgactcccg aggacgtgcc
     9361 tagcgccagc ccttcgtact ggatcagcga atagacggtg cggaccgtct cctcgtcggg
     9421 gatgaggaag gcctcgtcca ccgtcaggcc ttcgaggttg gcggtgatcc ggccctggcc
     9481 gatgccttcg gtgatcgagc ttccttcggc gcgaagctca cccgccgtat aatagttgaa
     9541 caatgccgcc cctggcacgt cggcgagcgc gatcgtgacg tccgcctttc gctcgcggag
     9601 cgccatggct gcgcccgcca gcgttccgcc ggtgccgacc gcgctgacga acgcgtcgac
     9661 cttgccgccg gtctggtccc agatttccgg cccggtggtc ttcacatggg cgtcgcggtt
     9721 ggcggtgttg tcgaactggt tggcgaaaat ggcgccgtgc tcgtcttcct tggcaagccg
     9781 ctccgcgaga cggccggcga ctttgatgta attattgggg ttcttgtacg ggacagccgg
     9841 cacttcgatc agcgttgcgc cgagaagccg gagggcggtc ttcttttctt cggtctgcgt
     9901 ctcggggatg acgatgaccg tgcgcatccc aagcgcattg ccgaccacgg tcagcccgat
     9961 gccggtgttt ccggcagtgc cgtcgacgat gattccgccg gggcgaagtt ggccgttgtc
    10021 gatcgcctgc ctgacgatag aaagcgctgc acggtccttg accgactggc cgggattcat
    10081 gaattcggcc ttgccgagga tcgtgcagcc ggtttcctcc gacgctcgcc ggagcttgat
    10141 cagcggcgtg ttgccgatcg catcgagtac ggtgtcccgg atctgcatgc cgaggccatg
    10201 tagggcggca ccgggcggcg cgaaaggtca gtcacagcgc tgataccgca aataataagc
    10261 ccggcggccc tcgcgcccag ccttggcttc gtagcgggtc gccggccagc cgcccggccg
    10321 tttcaggaaa tcggacggct tttcggcaag ccacctgaac tggtggcggt ggcgctgcat
    10381 gatcatcagc gcccattcca gatagaccgg gtgatcggtg gctatccgca attcgccgcc
    10441 ggccttcatc tttgccgcga tgaggtcgat tggaccgtcg ttgaccatgc gccgcttggc
    10501 gtggcgcgcc ttgggccagg ggtcggggtg aagcaaatag acgaaggcga ggcttccatc
    10561 cggaactcgc cgaagcacgt cgagcgcatc gccgcgccac agcctgacat tcgcgaggtg
    10621 ctggtcgcgg atgtgcccga gcgcggttgc cactccgttg aggaacggct cgcaaccgat
    10681 gaagccatgg tcggggagaa ggtcggcgcg gtaagcgaga tgctctccgc cgccgaagcc
    10741 gatctcaagg tgaagcgggc ggtcgtcccc gaacaggcgc agcggtgtga tttcgccttc
    10801 ggccgggact tcgatctggg gaagcaattg atcgaccagc ttttgctggc tggcgcgcaa
    10861 tttgtgcccg ctcgaccgac catagagccg attcagggtc gttggatcgc cttgcttgtg
    10921 ggccgtcatg gctatgtcgc taatccattg gaggcgaggc ctgccagtgg taagttacgg
    10981 gggcgcaaca agagggggag gttctgatgc gtgcacttgg aatcaactgg ctggcggtgc
    11041 ttgtcgcggc gatcgcggtc tatgcaatcg ggttcatcat ctatgggctg ctcattcccg
    11101 aagacgtcaa catggcgatg agcggaatga ccgaggccga gaaatcgatc gcgctttcgc
    11161 gcatgccgtt cggcgtgctg atgccgatcc tgatcgcggc cttcatggcg ctgatcttcc
    11221 gctgggcgca ggtcgggagc gcggtcaagg gcatgcagct ggccgcgctg atcgcgctgg
    11281 cctcggcaat cccgaccgtg ctctacggct gggtgtacgg cggcctgtcg accgacatgg
    11341 ttgcggttga ctgcgctcat ttgatgctcg gccatgtcgt tgcaggcgcg atactcggag
    11401 gctggcgcta aatcgagtaa gccgccgttc aagcgggcag cggcagggtc gcggaatgaa
    11461 aactttcctg ctcgcactgc cgctgcttgt cctcgctgca ggccccgccc acgcgaccgg
    11521 cgggcttgcg tgcaggaccg ccggagcaga tccgatccag gtgtcgctgg tgatcggcca
    11581 cacagcggtg gcatcggtcg tcggcgcgcg gctcagccac aatggacgcg acgttgcagt
    11641 gaaggtcgcg cagtcgtggc tcgaccccgc cgaattccga ctcgacctga cagacccgaa
    11701 cgcgcttcgt catgagctca ggatccgggc gaaggcgaac ggccgctact acgacggctc
    11761 gctgtggcgt catggcaagc gccgctgggt gcgctgccgc gaagcctgag agcctgccgg
    11821 cgggaacctt cactgctccg ccgcgtccaa tccgcgacgc gcgactcttg ggcgcgctca
    11881 aacaggagga caggggagat gactgacagc gatcgatcgc ttcgcaaccc acgcagcacg
    11941 gcaaaaatcg cggatcatcc gatccatccg atgcttgttc catttccgat cgtctgcttc
    12001 gtcctggtgt tcatcctcga catcgtccac tcgcaaggcg agactggagt agccgaggcg
    12061 tcgacctggc ttctggggtt tggcctggtc atggccgcgc ttgcggcgat tgccgggctt
    12121 accgatttcc tcggcgacga ccggatccgg aggctaggcg atgcggtcaa gcacatgctc
    12181 gccaacgtga ctgcggtggt gctcgaactc gtcaacctcg tgcttcgctg gagggacccg
    12241 gacttcatcg attcaaccgg cgttttcctg tcgggaatcg tggtcctgat cctgctctac
    12301 agcggatgga agggcggcga cctcgtctac cggcaccggg tcggagtgaa cgacacgtcg
    12361 aacctgtagc gctcaggcgc cggcggtcgc cggctccgtt ccaacggcgg ccttgagctc
    12421 gtcggccagg tcgacccgct cccacgggaa gaagtcgcca tccgactgac gcccgaagtg
    12481 gccgtaagcg gcggtcggct cgtagatcgg ccggttgagc tggaggtgag tccggatccc
    12541 gcgcggcgtg agtccgccga gcttttcgat ccggccgatg gccgcttcga gctcgcggtc
    12601 gtcgagcctg ccggtgccgt gggtgttcac gtagagagac aacggctccg agacaccgat
    12661 cgcataggcc agctggatcg tgcagcggcg agcgagacca gccgcaacga tattcttggc
    12721 gaggtagcgc gccgcatagg ccgctgaccg gtcgaccttg gttggatcct tgccggaaaa
    12781 ggcgccgccg ccgtgcggcg cagcgccgcc gtaggtgtcg acaatgatct tgcgcccggt
    12841 aagcccggcg tcgccgtcgg gcccgccgat ctcgaacgcc ccggtcgggt tgatgtgata
    12901 aacggtgttt tcggtcagca gctcgccggg aaggacctcc gcaacgacct tcttcacata
    12961 gtcgcgaagc tcgccgtaaa gcttcgcatc ggcaaattcg cctttttccg aatagccctg
    13021 cttgtgctgg gtcgagacga cgatcgccgt cgcctcgatc ggcctgccgt tatcgaagcg
    13081 cagcgtgatc tggcttttgg cgtccggctc aaggaacggc gcagcgccgg aatggcggtc
    13141 gtccgccata cgctgcagga tcttgtggct gtaatagagc gtcgccggca tcagttcggg
    13201 ggtttcgtcg caggcgaagc cgaacatgat gccctggtcg ccggcaccct cgtccttgtt
    13261 tccggccgca tccacgccct gggcgatatg ctccgactgg ccgtgcaggt gattctcgaa
    13321 ctcggccgtc tgccagtgaa agccgtcctg ctcgtagccg atccgcttga ccgtctggcg
    13381 aacgacctgc tcgatctcgt cgcgcgctcc cggagcccag ccgtgcgtgt ccttgaaccg
    13441 gtcctcgtcg tagatcggcc ggcagcggat ttcgccgccg atcacgattc gctgggtcgt
    13501 cacgaacgtc tcgcaggcga ctcgcgcttc ggcgtccttg gagaggagaa ggtcgacgat
    13561 cgcgtcgctg atctggtcgg cgaccttgtc cgggtggcct tcggaaacgg attcggatgt
    13621 gaagagatag ctgctgcgca ttgtcgggct agggtcctcg cgagatgccg ctgaggtgac
    13681 ggcggtgata taaaggattc gttatgtgcg ccgatagcgc cagcccccgg cgagggcaat
    13741 ggcgccggcg aggagaagcg cagcgaacac cagcggcagc aaatttccaa agcgggcgaa
    13801 caaggtcggc tgcggcgatt tcggcggcaa gtaggcgtcg atgacccctt cggtgcgcca
    13861 gccgagctgc ttcacgacac ctccttgcgc gtcgatgacg gcactgatcc cggtcggggt
    13921 cgcgcggatc accggaagcc cttcctccgc cgcccggagc cgcgcctgcg ccagatgctg
    13981 cggagggccc cagcggccga accaggcgtc gttcgacgga ttgaagatga cgtcgggccg
    14041 gttggcctgg tcgacgacct cgccggaaaa gatgatttcg tagcaaatct gcagcccgac
    14101 cttgccccag ccggggattg cgatcgtgcg cggccccggg ccggcgttga aatcgacatc
    14161 gccgggagcg aggcgcgaca ggccaagcgg ggtcagaagc gaacgcatcg gcagatactc
    14221 gccgtacggg acgagatgcg ccttgtcgta ctgcccggcc ggctttcccc cggggccaag
    14281 cacgaagata ctgtttgtcg cacccgaaac gcgggtgccg tcgtccgata tcagcgcgat
    14341 tccgccggtc agcagatatt cgccgtcctc gagcgaggcg gcggcccggt tgcgctcgaa
    14401 agccgccatc gcgcttgcag cgccgccgcg gccgtcggcg agcggttcgg tcaccgccgc
    14461 ttcgggccag aacagcagcc gcggccgaac gccactcggc gcgttcgaga gcgacgccat
    14521 cttgcgggcc gccgcatctg agaactccgg ccgccacttg tcctgctggc cgatgttcgg
    14581 ctggacgacc cggaccggcc tgatgatcag cgggtcgtcg ggaacattcg aagcgggaag
    14641 cagccacagg agcgcggcga ccagaacgat cagcacgccg ggaagccatt tgcgccggat
    14701 ttcgagccag atgacgcttc cgaggaggac tgtaagcgcg gagaggccgt aggtgccgag
    14761 cagcgccgaa agcgtgatca gcggagtcgg caccattgcc gccgcggccg ggttccaggc
    14821 aaagcccgta aacaggcccg cgcggagcca ttcggtgatc gcccaggcgc ccgccagcgc
    14881 cagcgccatc gcagcctcat tgtccttgcc gatcctccag gcgagccccg tcgcgagcgc
    14941 tgggaacacg gcgaggtaaa gcgacaggag aaccactgcg acccagccca gccaagccgg
    15001 catggctgcc tggtaggtga aagcggtcgc gatccagttg agtcccacca cgaactggcc
    15061 gaggccgaac agccagccga tcgcgagcgc tccgcgaagc cgctccgttc gccacaacag
    15121 ccacagcagc accgcgaagg cgaccggcat caacacccac agccccgcgg gctcgaaggc
    15181 gaaggccgag gcggctcctg tgaacagcgc gacgagcagg tacagcatcg atgattggct
    15241 agcggttacg cgcgttgaac gaaagtctgg acagcggcct gcttcgcaag cacgggagcg
    15301 cgatgccgct gccgcccttt cacctcgctt tccccgtcga cgacctcgcc gccgctcgtg
    15361 ccttctacgg tgggcttctt cagtgcccgg aaggccggag cgccgacgat tgggtcgact
    15421 tcgatttctt cgggcaccag atcgtcgccc acctcgctcc gaagacggtt cggagtaggg
    15481 ccagcaactc cgtcgatggc gacgacgtgc ccgtgcccca cttcggaatc gtgctcccga
    15541 tcggcgaatg gaaggcgctc gccgagcggc ttgtcgatgc tgacgttgaa ttcgtgatcc
    15601 cgccaacggt ccgattcgag ggcgagccgg gtgagcaggc gacgatgttc ttgtccgacc
    15661 cggccggcaa tgcgttggaa ttcaaggcca tggcaaaccc ggcgaacctg ttcgccaaag
    15721 gctagccgga ctcgacctcc gcctcgggcg cgtggaggcg aacgcggagg atccggcgcg
    15781 ggtcggaatc gaccgcctcg agccgccagc cggaagggtg aagcacggat tcgccgcgcg
    15841 ccgggatatg gccggacagc aggaacacga gcccgcccaa cgtatccacc tcgtcttctt
    15901 cccagatcag ccgcgcgtcg acggtctcgg ccagctcttc gagctcgatt cgcgcgtcgg
    15961 cctcccagac accctcgtcg agccgggtga gcatcccggc agcttcgacg tcgtgttcgt
    16021 cctcgatctc gccgacgatt tcctcgacca cgtcctcgat ggtgacgagt ccttcggtcc
    16081 cgccgaactc gtcgacgacg atcgccagat ggactcgctc cgcccgcatt cgggccagca
    16141 ggtcgatcac tcccatcgat tcgggaacga acaagggagt ccgcaagagt gcctggatcg
    16201 agcgctcgcg atccttgtcg atcatcgccg cgaacaggtc cttgatgtgg accatgccga
    16261 taatctcgtc gaggctctcg ccgtaaacgg ggaggcggct gtgctcggct tcggcgaacg
    16321 ccgtcacgag ctcgtcgaag tcgatggtcg cggggacagc aacgatttcc ccgcgggtga
    16381 cggcgatatc cccggcggtc tcgtcgccga aatgaagcag gttgcggagc atctgccgct
    16441 cgatgggagt gagatcgccg gcgatttcgt gcgattcgtc ggcctcgtcg atcgcttcct
    16501 cgatttcctc tcgaagcgtc tgctcgccct cgtcaccgaa gatgagcgag cgcatcccgc
    16561 gccacaggcg tgacccggcg tcgtcgttgt tcgtcgccat cagatttctt ccaccagata
    16621 gggatcggcg atccccagcc ggccgagcgc tcttatttcg cgcgattcca tcgctttggc
    16681 cgattggtca tcgtggtgat cgtagccgag caggtgaagc gtcccgtgga cgagcaggtg
    16741 cgcggcatgg tcgcagaacg ggatttgttt ctcggcggct tcggcctcgc agactccgcg
    16801 cgcgagcacc aggtcgccga gcatcagctc gcgcccgttg tcctcgtcgc gctccagctc
    16861 gcctggctcg agctgcggga acgacaaaac gttggtcggc ttgtcctttc cgcgccattg
    16921 cgcgttaagc gccttcacct gctcatcgct ggtcagccgc accgacagct cgacgagccg
    16981 ctgcgatgtc gcgagctcgg ggaatccgct ttcggcgatt gccgcttccg cagcgcttcg
    17041 caccagcgat tcccagccgc cgctactgtc ccactccgga tcggcgtcta tgtcgatttc
    17101 gagcatcatc caggctcagg ccccgggccc ttcataggcc tcgacaattc ggcccaccag
    17161 cgggtgccgg acgacgtccg ctgcggagaa tgggacgatc gctataccct tcacgccatc
    17221 gaggcgttcg actgcatcgt gaagcccgga cctgccgcct tcgggaaggt cgacttgctt
    17281 ggggtcgccg cagatcacca tccggctgag cattccgaac cgggtcagga acatcttcct
    17341 ttgcgcgggc gtggtgttct gcgcctcgtc gaggatgatg aaggcgtcat tcagggtgcg
    17401 gccgcgcatg aaggcgatgg gagcgatctc gatctcgccg ctggcgatcc gccgctcgac
    17461 ctgctcggtc ggcagcatgt cgtagagcgc atcgtagagc gggcggagat agggatcgac
    17521 cttctccttc atgtcaccgg gcaggaagcc gagccgttcg cccgcctcga cagccgggcg
    17581 cgacaggatc agcctgtcga cgctcccgga gatgagctgc gacacggcct gggctacggc
    17641 gagataggtt ttgccggtgc cggccggacc gagggcgaag atcatgtcct ggctggccag
    17701 cgcttccatg tagacagtct gggtcggcga gcgcgggacg atcgtcttct tgcgagtgcg
    17761 gatcatcacc cgcggcggtg tcgtcacctc atcagcgacg atcccgtcga agctcggctg
    17821 cgcggccatt ccgatcaccg attcgaccgc ttcggcatcg atgtcgtgcc cttgctcgag
    17881 ccgcttgtag aggccgatca ggacgtcgcg ggcgcgcgcg gccgaatccg ggtcgccctc
    17941 gatctgcacg cggttgccgc gagcagcgat gtggactcca aggcggcttt cgatggtaat
    18001 caagtggcgg tcgtaatcgc cgaacagcgg gccaagcagg tagggttcat cgaaatccag
    18061 ctcgagccgg gtccggtcgg gtactgcggc aaggtcgcgg cgggccacta ggcagcttct
    18121 ttctgtcgaa gggcgccggt catgctgttc ggaccggcgg cggtcagggt gacttctagc
    18181 atcgtaccgg cctctgcatc cgagtccacg tgaacggact gcagccatgg cgagcgccca
    18241 atcatctggc cggtgcgcct tccggggcgt tcgataagaa ttcgcgtgtc tcggccgacg
    18301 gtcgaccggt tgaacgcaag ctggtgctcg gcgattcgcg actgcaaccg ctgtagccga
    18361 tcgtccatga tctcacgggg aacctgttcg tccatcgctg cggccggcgt gcccgggcgg
    18421 gcgctgtact tgaacgaata agcggacgcg tagcccactt catcgacgat ccttagggtt
    18481 gcttcgaact cttcctccgt ctcgccgggg aagccaacga tgaaatcgcc ggaaatcgca
    18541 atgtcgggcc tcgcggcgcg gaccctttcg atcgtccgga gatagctccc gctggtatgg
    18601 cttcggttca tcgccttcaa aacacggtcg ctgcccgact gaaccgggag gtgaaggtaa
    18661 ggcatgagtt tttcgacttc gccgtgggcc gagatgaggt cgtacgtcat gtcggcggga
    18721 tggctggtcg tgtagcggat ccgttccaac ccatcgatgc gtgcgatttc ccggatcagc
    18781 gcggcgaggc cgcggccgtc attcatccac gcattcacgt tctggccgag caggactatc
    18841 tccttcgctc ccccatcgac cagcgcctgc gcttcggcga cgatgtcatt ccagggccgc
    18901 gagatttcgg caccgcgcgt gtagggaacg acgcaataag tgcagaattt gtcgcagcct
    18961 tcctggatcg taaggaaggc gctcggcgcg gcccggcggc gcttcggaag cgagttgaac
    19021 ttcgaaatcg acggcatgtc ggtatcgacc gggcgggccc cgcgcgcagt cgctgcgatc
    19081 atctcgggaa gccggtgata ggcctgcggg ccgaccacca tgtcaatcat gggcgagcgc
    19141 cgcttggctt cggcgccctc ggcctgggcg acgcagccgg caagcgcgat catcggcctc
    19201 gatccatcct cccgcctcag cctaccgacg tccgaatagg ccttctccgc cgccttttcc
    19261 cggatgtggc aggtgttgag gacgaccagg tcggcatcct ccccttcggc tgccgcagcc
    19321 aggccctgtt cgtcgagtag ctcggccatc cgctcgccgt catagacgtt catctgacag
    19381 ccgaaggatt tgatccgaaa ggtctttggg ggtgcgttca tcgatcggcc tataggtgag
    19441 ccgagccggg acttgaagag agcgcagtcg cgatggcttc gcgggccgag tgggccagcg
    19501 ccttgcggtc gccggtcgga tcgagcggat cgaggagtcg cacgatcact tcaacagccc
    19561 gggtgcggcc aagggtcctc agcacgtttt gcctgcccga ctcgccgtgc cagccgagct
    19621 cgggcgccgc atcgccgtaa tcgatggcga ccggccggac ctgcaccctt ggcggcgccg
    19681 gagcgacggc ggcgaacagc gtcgaccgga acggcagcaa atgcgtcccg ggccccgtcg
    19741 tcccttccgg aaacaacgcc agcggctgcg ggtagcgaag cgcttcggcg acctgctttg
    19801 cctggttcga cgcgccgcgc cggtcctccc gccggatgta aagcgtcggc ccctggtcgg
    19861 ccatccagtg gataaggccg tgaccgagtt cgtccttcga gacgaaggcg cacccggtcg
    19921 caccgccgag gacgagaatg tcgagccagc tcgtgtggtt gcagatcatc agcgtgtgcg
    19981 gccgaagggg ctttccttcg acccgaacgc gagcgccgca aatccacgcg gcggccgcga
    20041 gaaaacgcgg cggccacggc gaatcgccgg aaagtgccct cgtcacgatg tgaatcggag
    20101 ggcacacggc gaacagcagg accagcgcgg caatccgcag cgccgcaatc gccacggtgc
    20161 cgcggttact ggcgcttgcg gtcgagtgcg acgccgtaca gctccatcct gtggtcgacg
    20221 aggcggaaac ccagcctctc ggcgatctgc ttctggagct cttcgagctc ctcgtcggcg
    20281 aattcgacga cattgccggt ctcgacgtcg atgagatggt cgtgatgttc gtccgatgcc
    20341 gcttcatagc gggcgcggcc gtcgccgaac tcgtgccgct cgaggattcc ggcttcctcg
    20401 aacaggcgca cggtacgata gaccgtcgcg atggaaatcc ggggatcgac cgccgaagcg
    20461 cgctcgtgaa gggtctcgac gtcggggtgg tcctcggact ccgagaggat ccgggcgatg
    20521 acccggcgct gctcggtgat cctcaggccc ttgtcggcgc agagtgcttc gatgtcgatg
    20581 actgcgtggc tcatggatgg gaaagtaggc gcgagcggtg cggcggtaaa gggaaggggg
    20641 caccgagagg cgcccccgtc gacttatttc gacttgcggg tgcgccggcg cttggtgcca
    20701 aggccgatcg acttggcaag tgttcggcgc tgttccgcat aattgggcgc gaccatcgga
    20761 taatcggacg acaggcccca tttctgccga tactcggccg gggtcaattc gtggttggtc
    20821 atcaggtggc gcttgagcat cttctgcttc ttgccgcact cgaggcaggt gacgtaatcc
    20881 ggcttcacgg acgagcggat cgagaccttc ggttcctgct tttcttccgc tgcggaaccg
    20941 ggacccgaaa taccagtcag cgcctggtgc acattttgta tcaaattcgg caagtcgctg
    21001 acggcgacac tgttgttgct gacgtgcgcc gcaacgatgt cagcagtcag ggtgagcaaa
    21061 ctgtcttctg ccgctccatt ctcggccatt atattcattc tccgctggat ttgatcgggt
    21121 gcagcacttt catgcgcggt gaaccgtggc cctagctact tgcgcttggt gcggcaatag
    21181 agcggctatc ttgatagcga ttaattttcc acggccagca caaacgttaa tgcgtcgaat
    21241 tcgcccccgc cgcggccgcg gtagtaattg cggcggcggt tggcctgcgc gaacccagcg
    21301 gacttgtaga tctcgatcgc agggttgccg tctcgaacct ctaggtggat ccgctcggcg
    21361 ccgttggtcc tggaatggcc gatgaagtga gataggagct cgcggccgac accacgtcct
    21421 tgcgccgccg gatcgactgc gatcagaagc agctcggaat cgtcggcgac cgtgcgaaac
    21481 agcgcgaacc cgacgaccct ctcctcgtcc ctggcgagca cgagacggac acccgtcatc
    21541 ggcaggattc ccgcgcattg cgagcgcgtc cacgcttccc cgtagcgatc ggcgaacgcg
    21601 gcagccatga cccgcatgac gtcgtcgaga tcgtcggcgc cgccatcgac aagctcgacc
    21661 gtcatgccgc gctccttgcc gtggcgtctg gagcgcgcgc gtagacggga accggcggca
    21721 aggtccggag ctgctcggga agggtgaggg caagcgacgc gctcggccag ccatccatcg
    21781 ccttgccatg gcctcgagcg tcgacaagcg cttgcgcgcc cgggccgacg accaggccgg
    21841 cagtgatttc ggccgcggcg cgatcgggcg gaaggttgag cagctcgccg gccgggcgga
    21901 gcgcgccgtg gaactgctgg acgaacagct cgccgtggcc gccgatcatc gcaacggcga
    21961 cttccccgga tgcccccgcc gacgccgcca gaagggcgag cgacgacagt ccgcgaagct
    22021 tcgaattcca gccaatcgca agcccgcttg cggccgcgag cccgactcga attccggtga
    22081 agctcccggg accgactccg acgaggatcg cgtccgcatt gcgcccgtcg agtagctcat
    22141 cgagcatcgg cgcgagacgc tcggcatggc cacggccgat cagttcgtca gcctgcgcaa
    22201 cgcatcgtcc gccgtcgaac agggcggccg tgcaggcggc tgtagacgtg tcgatcgcca
    22261 gggtgatcat ggttcggcaa tgggccacag gcgagtggcg ggggcaagct ctttagatcg
    22321 cctcgacgct ttccacttcc ggcacgtaat gcttgatcag gctttcgatg ccgcgcttca
    22381 gagtgacggc cgaggacggg cagccctggc aggcgccctg catgccgaga tataggcgcc
    22441 cgtcgcgata gcccttgtaa atgatgtcgc cgccgtcctg cgcaaccgca ggccggacgc
    22501 gggtgtcgat cagttccttg atctgctcga tgatctcgga gtcggcgggg tcttcctcga
    22561 tcgcggattc gggcgcgacc tggattccgg cagccgtccc ggctttgaac agcggcgccc
    22621 ccgtgacgaa atggtcgagc aggatcgaca cgacctcggg ctcgagcaag ggccagtcca
    22681 cgcccggagc ggcggttacc gacacgaagt cgcggccgaa gaagactcct tcgaccattt
    22741 gcgtgttgaa cagggcttcg gcgagcggcg aagcttcggc gctctccgca tcggggaagt
    22801 cccgggttcc cgattccatc accgcctgtc cgggaaggaa cttgcgggtc gacgggttgg
    22861 gcgtgtgctc ggttcggatc agcatgaccg cgatgtggcc cctcgacctg ctccccgcaa
    22921 gggacgggcg gctaaagcgg tggagccccg gcgacgatcc acgcggtgag cgcgagggcg
    22981 actgcgacgc tcgcgatcac gactggcggc ggcacctgcc gcatcggctc gactccgggc
    23041 gcgagctcgg ccttgccggt gatcatcggc cccagaaggt tgagaccgag ggcgagccgg
    23101 tagagcagga tggcggcgat atgcaggccg atcaggatga gcaggaaatc gaacaattcc
    23161 tcgtgaagct cggtcgctgc atccgaggtc gcgaggctga cgagatgcgc cagcggtccc
    23221 ccggcgaggc cgtcctcatc cagcgcgacc agcccggtgc cgacaatgac gacgagcatc
    23281 aggagcaggg cgaggacgct tagcgctcca agcggcgtat ggcccgcgac cgtccagcgg
    23341 aagcgattgc gaaagtaggt gaacagcgcc gcgggaccgc gcacgaaggt ggcaaagcgt
    23401 gccgtggagc tgccgacgaa gccccacagg atccggaaca gcagcaggaa gaggactcca
    23461 tagccgaacc acaaatggag gtcgtaacgg tgggtttccg cgctccacca gctgaggccg
    23521 accagcacca ccagcgacca gtggaacagc cgcgtcggga gatcccagac ccgctgcttg
    23581 atcagtcttt ctccggagcc cggtaaagat cgtggcatgc cttgcagctc ttccccatcg
    23641 ccgcgaagct cgcattgatc tcgcttaaat ccccgctttt cgcagcagcg tcgaacgctg
    23701 ccgacgcgct ccggaaatcc tgcgccttgg ccgcgaagtc ttccggcttc tgccaaagct
    23761 cggcctttgc acgggtcttg ccgacgtccg ggccggtccc gtccgggaac caggagtgca
    23821 ggtccggcgc cagcgattca attttggcgg cggactggcg gatcactgcc aggtcggggg
    23881 cggacgactt gagctgccgg ttgatcgcct tggtcgcgtc gccgagcgct tccatatgct
    23941 cgtgccgctc cttcatgagc gcgagcgcct ggtccttggc gagtggctcc gaagcggcgg
    24001 tggcggcatt atgcgtttcg gcagagggca tgacggtgtt ggcttcgttg ccgtgctgcc
    24061 gagcatcgca gccagccaga agcgccagcg cgcaaagccc gtaaagcgtc ttgccagcca
    24121 tcattgcccc tctgccttcc aactgtcgtc gatcatcttg atgatcccgg aaaagtcctt
    24181 cgagccgccg cccctttcga cgaacttctc atattcttcc tcggcctctt cccccatttc
    24241 aagctccagg ccgacctgct ccgcggcttc catcgcgagc ttgaggtcct tgagcatcaa
    24301 cgccgccgcg aacccgccct cataatcatt gtcggcgggc gtctttggac cgactccggg
    24361 taccggacag taagaggtca tcgaccagct ctggcccgag gcctgcgagc tgatgtcgta
    24421 gaacacctgc ggatcgagcc cgagcttctg tgcaaggaca aaggcctcgc aggtcacgac
    24481 catcgtcgcg ccgaggatca tattgttgca gattttcgcc gcctgtccgg cgcccgcgcc
    24541 gccggcgtgg atcaccgcct tggccatggg atcgaggatc ggctgcgcct tggcgaaggc
    24601 gtcgtccgag ccgccgacca tgaatgcgag ggtcccgccc gcggccgccg cgatcccgcc
    24661 ggagacgggc gcatcgacca tttcgtaccc cttcgcggaa gcttcctcct cgacggtgcg
    24721 ggcgctgccg acatcgatgg tggagcagtc gataagcagc gcgctcgtcg gcgcattgcc
    24781 taagacgtgg ttgcggtaga cgtcgagcac atggcttgcg gccggaagca tggtgatgac
    24841 gacctcggcg tctttcaccg cttcctcggc agatccggcg cgtgcgcagc cctgttcgca
    24901 agccttggac agcgcctctt cgctcaaatc gaacgcaagg acctcgtggc ccgccttcac
    24961 caggttcggg gccatccccc cgcccatgtg gcccaagccg atgaatgcga tacgcgccat
    25021 cttaccgtcc cttccaattc cccggccgct tctcgacgaa agcggtcatg ccttccttct
    25081 ggtcctcggt gccgaacagg ccgtggaaca gccgccgctc gaaaatgatg ccttggttca
    25141 gcggcatttc gaatgcggcg ttgaccattt ccttgacggc gattgcggcg agcggcggca
    25201 tcgctgcgat cgcttcggca gtcttcatcg cctcgtcgag aagctgctcg gcggggacga
    25261 ccttcgccac cagccccgac tgctcggctt cggctgcgtc catcatccgg ccggtgaggc
    25321 acatctccat cgccttggcc ttgccgatcg cccaagtcag gcgctgggag ccgcccattc
    25381 ccggcgtgac gccgagcttg atctcgggct ggccgaactt cgcgttttcc gacgcgatga
    25441 tgaagtcggc catcatcgcg acttcgcagc cgccgccgag cgcgaagcca ttcactgccg
    25501 caatccacgg cttgcgtgtc gcggtcactt tctcccagcc ggcgaagaag ttcgacgaat
    25561 acatgtcggc gaagccctgc ggctgcatct ccttgatgtc ggcgcccgcc gcgaacgctt
    25621 tctcgccgct tccggttagg accaggcagc gctgcgattc gtccgcgtca taggccgcga
    25681 aaacctcgat cagttccttg agaacctcgc tgttgagcgc gttcagcgcc tgcgggcggt
    25741 tgagcgtgac gagcgtcacg ggcccccgct tctcgacaag gacggtggtg tagtcggtca
    25801 ttcactcgtc tccggaaacg gcgtccactg ctcgctcgcg ggaagcggcg cgaacagctc
    25861 gtcgagcatc tcgtccgtca cgccttcggc aatcggcggg tcccattgcg gctcgttgtg
    25921 cttctcgatc aggacggcgt tgacgccttc cttgaaatcg tgggtgcgga cgacccgccc
    25981 ggccagcgca tattcggcgc gcatctcgtc ggcaaaggtc gagcggccgg cgccttcggc
    26041 gagaagccgg agcgaaacct tgcacgacag cgggctcttg gtccggagcg ttaccagctc
    26101 cttctccgcc cattcgctgc cgtcggtttc gagagcgtca agaacgtcct cgagctggtc
    26161 ggacgcgaac agccgattga tcgccgccgc attgtcggcg atccgggcgt ccggcggcga
    26221 ttccgatgcg gcgccgagcg cgcctttcac ccggtccggc gatttgtgga ttcggtccac
    26281 gagctcttcg accccactgc tcgccacata gtgggtcgca aggcccaggt aggcgcattc
    26341 ggcgccgtcg aggcgagcgc cggttagggc catgaactgc cccacacgcc ccggcagccg
    26401 cgacaaatac cagccgccgc cgacatcggg gaacagcccg attcccgttt ccggcatcgc
    26461 caggcgcgta ttctcggtcg cgacgcggaa ggtgcatggc tgcgagattc ccacgccgcc
    26521 gcccatggta atcccgtcca tgatcgcgac ggtcggcttg tcgtaggtga agagaaggtg
    26581 gttgagccgg tattcggcga aaaagaactc gcgcgccttg cggccgtcgc ccgcgccgct
    26641 cttcgccaat gtaacgacgt cgccgccggc gcagaaaccg cggccgacgg catggtcgat
    26701 gactacgcac tggatgtttg agtcggtgcg ccagcgcagg agcgcggcgc tcatcgcctc
    26761 gcacatctga gtcgtcagcg cgtggatcgc ctttggacga ttgaggcgaa tacggccgac
    26821 gccgcgctcg gccgagatca ggacatcgcc agtcacttcc aaactcccgt cactggcgca
    26881 gcaaatccct gctgacgatc acccgcatta tctggttggt cccttcgagg atcgagtgga
    26941 cgcgaagatc gcgccagaag cgctcgatcg gatagtccat cagatagccg tagccgccgt
    27001 gaagctgcag cgcccggtcg accaccgacg agccggtatc ggtggcaagc cgcttggcca
    27061 tcgccgcgaa cctggtcttg tcgggcgcgt tcgccgtcac cttcgcggcg gcgacgtaga
    27121 gcaggtagcg cgccgcctgg agctcggttt ccatgtcggc gagcatgaat tgcgtgttct
    27181 ggaaatcggc gatccgctgg tcgaactgct tgcggtcctt ggtgtaggcg atcgcctcgt
    27241 cgaggcagcg ttgtgctccg ccgagcgagc aggcgccgat gttcagccgc ccgccgtcga
    27301 ggcccatcat agcgatcctg aagccttcgc cctcggcgcc gacgcggttg gcgaccggca
    27361 cccggacctc gtcgaaattg acctggcacg tgggctgcga atgccagccg agcttctttt
    27421 cctgggcgcc gaagctgacg cccttcatgt ccttttcgat gacgagcgcg gtgatgccct
    27481 tgggcccttc ctcgccggtc cgaaccatgg tgacgtagat ctcgttctcg ccgccgccgg
    27541 agatgaatgc cttcgagccg gagacgacat aatggtcgcc gtcgaggacc gccttggtct
    27601 tgagcgccgc cgcgtcggag cccgacgacg gctcggtcag gcaatagctt cccatccgct
    27661 ccatcgggat catcgacggg agatacttct gcttcacatc gtcggagccg aagcggtcga
    27721 tcatccacgc cgccatattg tggatcgaga tgaaggcgct ggtcgaagga cagccatagg
    27781 ccatcgcttc catgatcagc gccgcctcca gacggccgag gccgattccg ccgctctcct
    27841 cggacacgta gatggcgccg aagccgagct cggcggcctc gcggattacg tccttgggca
    27901 ggatgtgctt ctcgtcccac tcggccgcga ccggactgat cgcgtcggcg gtgaacttgc
    27961 gcgccatttc ctggatctgg agctggtcgt cggtaagctc gaactggtgc atgggcgtgg
    28021 cgtctagctt gcgagtccgg gcgaggccag cccccgctca gccgaagtcg aattcagcaa
    28081 cgcgcatagg tgaagctcgc gttgggatcg cgctcggttc gcacgagctt cttgtcctgc
    28141 agttctagcg acagatgctt cgtccattcc tggccttcgc cggcgaagct gaagtcgccg
    28201 ctgatggagt cgggcgaaac gtcgacatcg ccggctggca ccgcgcgcga ttcatagaat
    28261 tggagcctgt cggcggtcac taccagcagg cccttggcat cgccgcgggt ggacgtgcag
    28321 tcgccgggcg tcagccccca gcgcccatgc agagcggccg gcatttgtgc cgccgcagta
    28381 ggcgcggcgc tgatcggagt cgccgcattt acgggtggtc cgcccgttgg gctcgcggcc
    28441 tcgttatgcg ccggttccgg aagcaaggcc gcgtcttctt cgcccttggc tactgggtcg
    28501 ggccgtccgc aggcggcgag tgctgcgaca accgccaatg aaaacgcaac tctcatggcg
    28561 gctaaaccac cgcaataggt cgaagttgcg tgatgtgctc agccgtgccg cccggcacgg
    28621 cctgggcctc atcaccccat cgtcgggatg acgaaggcgt tttcgccggt caccgatccg
    28681 tcgggccagc gctgggtgac gaccttgttc ttggtccaga agcgaaggcc ttcctgcccg
    28741 tactggccga tgtcgccgaa gcccgagcgc ttccagccgc cgaagctgtg gtaggaaacg
    28801 gggaccggga tcggcacgtt gacgccgacc atcccgacat tcacccggtt ggtaaattcg
    28861 cgcgccgcgt ggccgttgcg ggtgaagatg gcgacgccgt tgccgtattc gtgctcggaa
    28921 gggaggcgga cggcttcctc gaaatccttg gctcggacca tctgcaggac gggtccgaaa
    28981 atttcgtcct tgtagctctg gaaactcggc ttgacgtggt cgaagaaggt cgggccgatg
    29041 aagaagccct tctcgttgcc ctggagcgag aagccgcgtc catcgacgac cagctcgccg
    29101 ccctcgtcct cgcacatctg aatgtaatgc tcgatgcgct ccttgtgggc ctggctgacg
    29161 accggaccgt aatgggcttc ggaatcggtg gagaccccga cgcgcagggc gcggatggcg
    29221 ggaatcagct tctcgcggag tcgggtggcg gtgtcgtcgc cgacggggac aacgaccgga
    29281 agcgccatgc agcgctcgcc tgccgagccg aaggcggcgc cggcaatgtc gttgacgacc
    29341 tggtcgaggt cggcgtcggg catgacgatt ccgtggttct tggccccgcc gaacgcctgc
    29401 acgcgcttcc cgttcgcggt gccgcgcgaa tagatatatt gcgcgatgtc ggatgacccg
    29461 acgaagctga ccgccttgat gtcttcatgg tcgagaatgg cgtcgaccat ctccttgtcg
    29521 ccgtgcacga cgttgaggat cccgtccgga agcccggctt ccttcatcag ctcggcaagg
    29581 cggatcggca ccgaaggatc gcgctcggag ggcttgagga caaaggcgtt gccgcaggcg
    29641 atcgccatcc cgaacatcca catcgggatc atcgccggga agttgaacgg ggtgatcccg
    29701 gcgccgatcc cgagcggctg tcgcatcgaa tagacgtcga ttccgggccc cgcgccttgc
    29761 gtatactcac ccttgagcgc ctgcgggatt ccgcagcaat attcgatcac ctcgagcccg
    29821 cgctgcacgt ccccgcggga atcggcgatg accttgccgt gctcgctcga cagcagctcg
    29881 gcgagctcgt ccatatgtgc ttcgaccagc tccttgtact tgaacatgac ccgggcgcgg
    29941 cgctgcgggt tggtcgcggc ccaggccggc tgtgcggcct tggctgcatc gacggcgcgc
    30001 tggagctcgt cggccgtgcc gagcttgacc ttggcctgaa cttcgccgcg gttggggtcg
    30061 aagacgtcgc cgctgcggcc gctcgactga taggcttcgc cggcgatgaa atggtcgatg
    30121 tcacgcaaca tgaatggggt cctaaatcgt gagtccgggg gtgcgcggct cccctagacc
    30181 cggaccggag caatttccag ttggacggaa agcccgattg cttcgtcctc ttgctcctcg
    30241 caatgaaaga cgatgcgcga gcgaagcttc tcgaccgacc gcccagccga gcagcggccg
    30301 ctcgccggag tcgcgcttcg gctgctgacg gcgctcctcc tcgcaatcat gttcgcgctg
    30361 gtgaagcttg ctgcgagccg cggagtcaac ctggtcgaga ctctgttcta ccggcaatgc
    30421 ggctccgctg tttgcgcggt tgccttggtg gcgttcggtc ccggcttcga ctcacttcga
    30481 accaagaggg tgtgggcaca tgtcgggcgg atggcgctcg gcctgatcgc aatggcgctc
    30541 aactttgtcg cgttcatatt gcttccactg gccgaggcga cgagcatcgg attctcggtt
    30601 ccgattttct ccgtcgtgct tgccgcgctc ctgcttggtg agccgaccgg caaatggcgc
    30661 tggggcgcgg ttgcggcggg tttcgtcggg gtcttgctca tcgtccagcc gggaagcgga
    30721 cacgtgccgc tactcggcgc gtcggtggcg cttgcagccg ctcttttgac tgcgtcggtt
    30781 acgatcgtca ttcgccgcct cggcgcgacc gagcgggcag cgacgaccgt tttctggttt
    30841 gcagtcagct cgcttgtccc gcttggccta atgatgattc actttgccgg cccgcatgat
    30901 gcattgacgt ggcttttgct cgcggggctt gccgtcgccg gaggacttgc ccagctcact
    30961 ctgaccggcg cattgcggct cgctccggtc gcgctggtaa tgccgatgga ctataccagc
    31021 ctgctttggg cgacgctgct cggcgcgtgg attttcgggg ctttgcctgg cccgtggacc
    31081 tggatggggg cgccgatcat tatcgctagc ggcctggtca tcgtctggcg cgagcaccgg
    31141 cttcaccggc gggcggcatt gtctgcaggg accgcagtgc ccagctaggc gccgcaagga
    31201 gagttatgat ggcgggcgga tggacgcgcg acggagcggt tcaggaccag atcgacgaca
    31261 ctgtgaagga tgccgtgctt cgcgctcgcg cgctcacccc gaaaggcgag agcgcgaccg
    31321 aatgcgacga ttgcggcgag ccgatcccca agaaaaggcg cgacgctttg ccgggcgttc
    31381 ggacctgcgt cgcctgccag ggcaagcgcg acaaggcggt ggtccattcg accatcaatc
    31441 gccgggggag caaggatagc cagctgcggt agccgcgttt agggcaacac catggcccgc
    31501 aagcaaccca tcggactgcc cacccgcaag cagatcctcg acttcgtcgc ctcctccgac
    31561 cagccggcgg ggaagcggga gatcgcccgc gccttcgggc tcaagggcaa tgagaagatc
    31621 gagctcaagc ggctgctcaa ggagatggcc gaagaaggcc tgatcgacag ctcgcccggc
    31681 cgggcattcc acaaggccgg cggagtcccg aaagtgacgg tgctcaaggt caccgaggcc
    31741 gacgacagcg gcaacatctt cgcggtcccg gagcattggg aggcggaaac tccggcgccg
    31801 aagcttcgag tgatcgaaaa gggccgcaag agcgcgcttg ggatcggcga ccggatcctc
    31861 gcccgaaccg aggagcgcgg aaagggccac gtcgcccatc cgatgaaaaa gctcgcaagc
    31921 aaggcggagt tggtgctggg cgtgatccgg gaggacggcg gccgctactg gctgactccg
    31981 gtcgagaaaa aggagcggcg cgagcttccc gttaccgatc tcgacgatgc cgaggccggc
    32041 gacctggtct tgtgcgaagt gtcggggcgc gggccgcggg tcagcgcgcg cgtcgacgcc
    32101 gtgctcggcg acccgttcgc gccgaagagc ttcagcctga tcgctatcca caaatatgag
    32161 cttccgcacg aattcagcga cgcagtgatc gacgaagccc accgggtcgc tgcccagccg
    32221 cttggcgagc gcgaggacct cactcacctg ccgatcgtcg ccatcgaccc cgccgacgct
    32281 cgcgaccatg acgatgcgat ctgggccgag gccgacggcg attccgacaa caagggcggg
    32341 tggaacgcca tcgtcgcaat cgccgacgtc agtttctacg ttcgcccggg aagtgcgctc
    32401 gacaaatcgg ctcgggcgcg cggcaacagt gtttatttcc ccgaccgagt ggtgccgatg
    32461 cttcccgagg agctgtccgc tgacatctgt tcgctgaagg ccggcaagca acgcgcggca
    32521 atggcgtgcc acctgaaagt cgcaaaggac ggaacgctca agagctggag attttcacgg
    32581 gcgaagattt gtgtagcggc aaatattgcc tatgaagatg cgcagactgc gatcgatgcg
    32641 gcgggcgagg agcgggtcga agtttcgtca ccgacgtgtt cgatgccaga ggtcgaaggg
    32701 ccggtttcgt ccgaattggt cgacaaggcg ctcaagccgc tgtgggcgtg ctggcgagca
    32761 ctgcttgctg cccgcaaaaa gcgcggcccg ctcgagctcg acctgcccga gcggcaggtc
    32821 gtcctcgatg aaaagggccg gatccagtcg gtcgctgcgc gcgagcggct cgacgctcat
    32881 cggctggtcg aagattatat gatcgccgcc aatgtcgccg ccgcgcgagc gctcgaggcc
    32941 aggaaggcgc cggtgatgta ccgcgtccac gagccgccca gccgcgagaa gctgacggcg
    33001 ctcaaggact atctcgacac gttcgacatc ccgttcacgc ttggccaggt gatcaagcca
    33061 gagaccttca accgaatcat cgagcgcatc ggagattccg actttcagcc ggagatcatg
    33121 gagcagctgc tgcgaacgca gatgcaggcg cgctacgggc cggagcggct cggccatttc
    33181 ggtctcgcgc ttgcgaccta cgcccacttt acctcgccga tccgccgcta cgccgacctg
    33241 ctggtccacc gggcgctggt cagcgcgtac aagctcggcg agggcggcct tccaggcgag
    33301 gacgcggcca agttcgatga gatcggcgag cagatttcca ggctcgagcg gcgggcgatg
    33361 gaggccgagc gcgagaccgt cgaccgttac gtcgccgcct tcctcgccga ccaggtcggg
    33421 caggtggtcc tgtgccggat caccggcgtg cagccgttcg gcttcttcgc cacgctggtc
    33481 gatttcggcg gcgacgggat cgtgccggtc tcgaccatcg gcgacgaata tttccgctac
    33541 gacgagaaga cccagcagct ggtcggcgag gacaccggca ccagctatcg aatgggccag
    33601 aagctgaagc tgcggattgt cgagtccaat ccggtcaccg gcgggcttcg ctttgcgctt
    33661 cccgtcgacg agggccagga cgaccgggcc gagaggcgcc gcgaccgggt ccatcgtccg
    33721 caacagaagc gcggccgacc ggcgaatatc cggcacaagt cacggcggcg ctgaacggcc
    33781 gtcgcaacca tcgcatggcg ctgcacatta atggttcgag gagacaagcc atggcttaca
    33841 agatcgcgat tctcgtcggc agcctgcgag aggacagcat caaccgcaaa atagcgcggt
    33901 cgatctgcgc gttccgcgac gacaatctcg attgcgagat ggtcgagatc ggcaacctgc
    33961 cgctctacaa ccaggattcg gacgccaatc cgccgccgga atatgtgaag ttccgcgatc
    34021 agatccgcgc cgccgacggg gttctgttcg tcactccgga atataaccgc agcgtccccg
    34081 gagtgctgaa gaatgcgatc gacatcgggt cgcggcccta cggccaaagc gtgttcgaca
    34141 aaaagcctgc ggcaatcatc accgcctcgc cgggcgcaat cggcggcttc ggagccaatc
    34201 atcatctgcg gcagtcatgc gtgttcctga acatgccgat gatgctccag cccgaggcct
    34261 acctgggcaa tgtcagcgac gacagtttcg acgaaagcgg ttgcctgaag gaggggccgt
    34321 tgaaggacgt cgtgatcaag ctgtctcacg cgttcagcga ctgggtcgag atgatccagc
    34381 ggtcacgcga gctccttgca gaagacgcag cccattcgaa ggaaagcgag cgcgagcctg
    34441 aatcggtctg atttctaaag cttcggcagc gtgacgccct gctgccccat atatttgccg
    34501 gcgcggtcgg cgtagctcac ctcgcacggc tcgttgccct gaaggaagag gaactggcag
    34561 gcgccctcgt tcgcatagac cttggccggc aggggcgtgg tgttggaaaa ttccagggtt
    34621 acatggcctt cccagccggg ctcaagcggc gtgacgttca cgatgatccc gcagcgtgca
    34681 taggtggatt tgccgaggca gatcaccatc acgtcgcgcg gcacccggaa atattcgacc
    34741 gtatgggcaa gcgcgaagct gttgggcggg atgatgcaga cgtcggtggt tcggtcgacg
    34801 aagctgttgg cggcgaaatc cttcgggtcg acggtcgccg aatcgacgtt ggtgaaaatc
    34861 ttgaagtggt tggagaccct ggcgtcatag ccgtaggatg acaggccgta gctgatgcag
    34921 ccttcgcggc gctgcgcctc gacgaacggc tcgatcattc cgttgtcctg cgcctgctcg
    34981 cgaatccagc ggtcggaaag aatgggcatg agtgacgcct aaccggcgcc ggttcgcgct
    35041 tcaatcggcg ttgcccgata tcctcgttat ccacattgcc gttcccttta tgtccgtttg
    35101 gagcgacaag ggccgtggcg tagaaggtgg gcatggctga agtcgtacga atttccgaac
    35161 cggcgcaaac cgccggaacc ccgagcctcc ccgcgaatgt cgaggcggag gccgcgcttt
    35221 tgggcgccct aatgctcgac aaccggctgg tcgaggacgt cgggctgaag ctcaagccgc
    35281 accattttca cgaggagctt cacgcgcgga tctacggagc gatcctcaag ctcaccgaca
    35341 agaatatggt cgccaacccg gtcacgctgc ggccgatgtt cgaagcggac gaggcgatga
    35401 aggaagtcgg cggcgccggc tatctcggaa agctgaccgg ctcgggcgcg gcgctgattg
    35461 cggccaagga cttcgcccag cagatctacg acctcgcgct tctccgggcg ctgatcgggg
    35521 tgggacgcga gctggtc
//
LOCUS       DATAKH010000226        11550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26799,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000226 DATAKH010000000
VERSION     DATAKH010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 11550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11550
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26799"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..723)
                     /gene="phoB"
                     /locus_tag="VHN55_09605"
     CDS             complement(46..723)
                     /gene="phoB"
                     /locus_tag="VHN55_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HEX2804216.1"
                     /translation="MLVVEDDRAIADLIKHHFAKEGFTVTSTPSGEEALVLIEEINPA
                     LVVLDWMIEDVSGIEVCRRLRRSAANSKLPIMMLTARGEEEDRIRGLETGADDFITKP
                     FSPKELVARAKALLRRSSPNLVAETISYAGIEMDVAAHRVRRDGEPLALGPTEYRLLR
                     HFLQNPEKVFSRQQLLEEVWPHNEDIELRTVDVHIRRLRKVLESAGGKDVIRTVRSEG
                     YSLDANG"
     gene            complement(750..1442)
                     /gene="phoU"
                     /locus_tag="VHN55_09610"
     CDS             complement(750..1442)
                     /gene="phoU"
                     /locus_tag="VHN55_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEX2804217.1"
                     /translation="MQQPREHTLKAFDEDIDRLRALIAQMGGLAEHAIGEAMRCLAQR
                     DLEGARKVVEDDKKLDRLEIETEGRVVQLIALRAPMAGDLREAVAALKISGVVERIGD
                     YAKNIARRVPKLEDAGQIEPLSLLPEMARIATQMVHDVLDAFVNRDAEAAVAVAERDQ
                     AVDDFYDSIFRALLTHMMEKPNNIGQSAHLLFVAKNLERVGDHATNIAEMVYFAATGE
                     QMAERLEKAGSL"
     gene            complement(1456..2202)
                     /gene="pstB"
                     /locus_tag="VHN55_09615"
     CDS             complement(1456..2202)
                     /gene="pstB"
                     /locus_tag="VHN55_09615"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX2804218.1"
                     /translation="MRARDISVFYGDKQALKDVSIDIHDDRVTAFIGPSGCGKSTFLR
                     CLNRMNDTIPAARVTGRIELDGEDINSSKMDVVQLRARVGMVFQKPNPFPKSIYENVA
                     YGPRIHGLATGRQELDEIVENSLKRAGLWDEVKDRLQDSGTALSGGQQQRLCIARTIA
                     VDPEVILMDEPASALDPIATAKIEELIHELRGRYAIAIVTHNMQQAARVSQRTAFFHL
                     GELIEYGKTKDIFTNPRHQRTQDYITGRYG"
     gene            complement(2293..3561)
                     /gene="pstA"
                     /locus_tag="VHN55_09620"
     CDS             complement(2293..3561)
                     /gene="pstA"
                     /locus_tag="VHN55_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019371175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEX2804219.1"
                     /translation="MNRPGSSAAAASRWTDGSMDSRVRRRYAAERRFRLIGLAAVSLS
                     ALFLAFLLITMAWRGVGGFTQVQAAVPVDFPRSDLILDPAALRGDEARQAIAGADLEG
                     ILAQSATVAYGARAKDLFGTAAARDLGSRLIGDPDLLRERAILWLPVASGIGQAAKGD
                     GSAEAEQLASQLEQRDLLRTRFNLGFLTQSDATDPSAVGVWGALKGSFFTILVTILIA
                     FPVGVLSAVYLEEFAPRNRWTDLIEVSINNLAAVPSIIFGLLGLAVFLNFMHLPRSAP
                     LVGGMTLALMTMPVIVIAGRNAIKSVPPSIRDAALAVGASRMQVIFHHVLPLALPGIL
                     TGTIIGLARALGETAPLLMIGMRAFIATPPDGIADPATVLPVQIFLWSDEVSRGFVEK
                     TSAAIIVLLIFMLLMNGLAIYLRNRFEQRW"
     gene            complement(3554..4933)
                     /gene="pstC"
                     /locus_tag="VHN55_09625"
     CDS             complement(3554..4933)
                     /gene="pstC"
                     /locus_tag="VHN55_09625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017667515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEX2804220.1"
                     /translation="MTLVIALAAVILIAAAAAWLSFNRADRLRAKGRLHSLPVYHAAH
                     TFLWAALPALLFLALWAPVQTGFVNQAVLASAEGQALPDFDMQRQAILAEAREIARGQ
                     REAGFNPESSSLAPRFQAAETTYSTIGGTLALLIGLGGAFFASRRTRLGFRARTGVER
                     WMMALLVAASMVAILTTLGIVLSLMFESLRFFSRVPVGEFLFGLSWSPQTAIRADQVG
                     SSGAFGWIPLLWGTLFIGAIIAMIVAIPLGLMSAIYLTQYASRAVRSWMKPILEILAG
                     IPTVVYGYFAALTVAPAVRDFGIAIGISSASSESALAAGLVMGIMIIPFVSSMADDSI
                     AAVPQAMRDGSLAMGATKSETIRKVILPAALPGVVGGILLAVSRAIGETMIVVMAAGL
                     AANLTANPFASVTTVTTQIVQLLTGDQEFDSAKTLAAFALGLALFVITLVLNLIALSV
                     VRRYREAYE"
     gene            complement(4952..5986)
                     /locus_tag="VHN55_09630"
     CDS             complement(4952..5986)
                     /locus_tag="VHN55_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX2804221.1"
                     /translation="MNKSLFVLPLAAMIAACGGGGDRSASGAQIKIVGSSTVYPFTTA
                     VAEEFQRANPGTSVIVESTGTGAGMKLFCQGVGSQFPDMTNASRRIKSSELADCNSNG
                     VKEVVEFPVGIDGLAIIESTSGEPIELTLRDLYAALAARPFGKQQTAQTWQDVNPSLP
                     ATRIRVLGPPPTSGTRDSLNELFLEKGCASEPAMKALKESNEDEYKEVCTKIREDGAF
                     VEAGENDNLLVQKVSADPTALGVLGYSFLAENRDKVRAVTVNGVSPSDTTITDLSYPG
                     ARKIFIYAKTAHMRAKPAMRDFIAMFATMAQEGGPLQRRGLVPFRGADATAQQQQSTA
                     LKPLDSAELK"
     gene            complement(6078..7106)
                     /locus_tag="VHN55_09635"
     CDS             complement(6078..7106)
                     /locus_tag="VHN55_09635"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2804222.1"
                     /translation="MATSANVVSMAGPDPAAAALLNAFDDPALIVEGRTVRIANDAAK
                     ALLGGAVEGSDVRLAIRHPSALEFVLAGEPGDIDFTGVGAVGRPWRLSARQIDGGGLL
                     LRLIDRSAAHAAEKMRVDFVANASHELRTPLTAVLGYAESLEDGDLDPKLAAKFAGTI
                     RTEATRMLRIIEDLMSLSRIEADRFVTPSDTVALASILESAVERAGPAARECGCELHL
                     DLQQQLPKIHGDFAQLTQLVDNLLSNAVRYGCASEGCKIRASAAVEGDRIRLEVSDTG
                     PGIPRQHLPFLTRRFYRVDEARSRAAGGTGLGLAIVKHIVERHRGTLAIDSTPGAGTT
                     VTIRLPIR"
     gene            complement(7144..8469)
                     /locus_tag="VHN55_09640"
     CDS             complement(7144..8469)
                     /locus_tag="VHN55_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OprO/OprP family phosphate-selective porin"
                     /protein_id="HEX2804223.1"
                     /translation="MKTLLPILLASAAFAAPAAGQTAPATPDIAALQAQIEAMQAQLD
                     ELKAAQEAAAAKAEAAPAPAAKISWKGAPVIEGDGWSFKPRGRLMYDFGHVSRPAGYE
                     NAGLGFSNELRRGRLGVEGKLPGNFGYKLELDFAAGDPEFTDAYLSYSKGPWEVIVGQ
                     HNGFQSLEELTSSLHTAFIERAAFTDAFNFERRVGISGQFEKKALLVQAGVFTDNIAD
                     LNSVGDDNDSWGFDTRAVFMPKMGKNQLHFAGSFHHRDLNDSATSVRYRQRPAIHTTD
                     VRFVDTGSIADAESETAYGLEAAGIFGPFYVASEAYWQKVGRMSGLPDPTFFGAYVDA
                     GYFFTGESRGYKGGKFDRVKVKRPLDKGGWGSLGANIRFDHLDLNDAGIMGGKQNAYQ
                     ASLNWKPMDYLMFGLNYAHIVYSDAAIATPAGDRDYSVDMIGLRSQVDF"
     gene            complement(8631..9377)
                     /locus_tag="VHN55_09645"
     CDS             complement(8631..9377)
                     /locus_tag="VHN55_09645"
                     /inference="COORDINATES: protein motif:HMM:NF019128.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HEX2804224.1"
                     /translation="MNKLFSRGLVAAIGSVMLTFGAGTAAAQAAQLVKTNYSLKSDAS
                     KTSAAPVGARQAAPVLSAVQRTITSTTNLFSSAVGSVFGTQSDPRQAELGRIAREGRW
                     LHNAGWPLYALVDRYSAGVALDEQATCLATAVYFEARGESLDGQLAVARVVMNRAASD
                     RYPPTWCEVMTQPWQFSFVNPHTGRIPAINYQSAAWAKAQGVARLAMANAVPTVPTDV
                     LWYHADYVHPSWGRRLSYVDKIGAHIFYRA"
     gene            9689..10099
                     /locus_tag="VHN55_09650"
     CDS             9689..10099
                     /locus_tag="VHN55_09650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEX2804225.1"
                     /translation="MARWLMKSEPSSYSWQDLVRDGSTEWDGVRNNAARLHLKAMKRG
                     DEAFFYHSMDERSVIGTMRVAREAAPDPKDPDWVSVKVEPVTALPRPVSLKEIKAEPR
                     LAKMELIRQSRLSVAPVRDEEWALILAMAGKPQR"
     gene            complement(10137..10541)
                     /locus_tag="VHN55_09655"
     CDS             complement(10137..10541)
                     /locus_tag="VHN55_09655"
                     /inference="COORDINATES: protein motif:HMM:NF015935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HEX2804226.1"
                     /translation="MLHQRAEPPKKIDGPAAARQFFAGCLAESDLSRETLWVAHLDRE
                     SRCLHVSRHPGDEFGTDFPLRRIVGDAAVHGSRAILLAHNHPSGDPTPSDSDKRATSR
                     LACAAEALDCLLVDHLVFGAGRCASFRELGLL"
     gene            10765..11280
                     /locus_tag="VHN55_09660"
     CDS             10765..11280
                     /locus_tag="VHN55_09660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804227.1"
                     /translation="MAKRGIQRAGRAKLTIAGGASPKLRRPRRHEWTKAKEARFLETL
                     AETCNVTIAAEAAGMSVAGAYVRRKKIAAFRAGWAEAIATAYQRLELVMLDRALNGTE
                     KVVVRKDGSEERMREYPNQIALHLLKMHRDSAMEAIEDAEEADSAEVRERLVEKLERL
                     RKRFEAEDAGK"
     gene            11358..>11550
                     /locus_tag="VHN55_09665"
     CDS             11358..>11550
                     /locus_tag="VHN55_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010214773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX2804228.1"
                     /translation="MTVADAWDFDAEFENWAHKAQLPPSDEGWRTWLMMAGRGFGKTR
                     AGAEWVEKIARSRPGVRIAL"
BASE COUNT         2080 a         3571 c         3898 g         2001 t
ORIGIN      
        1 gaatccgtca atcgtggttc gaatccacgc ggggcatcca gcagttcagc cgttcgcatc
       61 gagcgaatag ccttccgacc gtaccgtcct gatcacgtcc ttgccgccgg ccgactcgag
      121 caccttgcgg aggcggcgga tgtggacgtc cacggtgcgc agctcgatgt cctcgttgtg
      181 cggccatact tcctcgagaa gctgctgccg cgaaaagacc ttttccggat tctggaggaa
      241 gtggcgaagg agcctgtatt cggtgggccc gagcgccagc ggctcgccat cgcggcggac
      301 ccggtgggcg gcgacgtcca tctcgatccc cgcatagcta atggtctcgg cgaccaggtt
      361 cggactcgag cgcctgagca gggccttggc gcgggcgacc agctccttgg ggctgaacgg
      421 cttggtgatg aaatcgtcgg cgccggtttc gaggcctcgg atccggtcct cctcctcgcc
      481 gcgcgccgtc agcatcataa tcggaagctt cgaattggcg gcgcttctgc gcagtcggcg
      541 gcagacctcg atcccgctga cgtcctctat catccagtcg agcacgacca acgccgggtt
      601 gatttcctcg atcaggacga gcgcttcctc acccgacgga gtgctcgtga ccgtgaagcc
      661 ttccttcgcg aaatggtgct tgatgaggtc cgcgatcgcg cggtcgtcct cgacgacaag
      721 catccgcttg ctgccgttgg cggccacgat cagaggctcc cggctttctc cagccgctcc
      781 gccatctgct cgccggtcgc cgcgaaatag accatctcgg cgatgttggt ggcatggtcg
      841 ccgacccgct ccaggttctt ggcgacgaac agcaggtgcg cggactggcc gatattattc
      901 ggcttttcca tcatgtgcgt aagaagcgcg cggaagatcg aatcgtagaa atcgtccacg
      961 gcctggtccc gctcggccac cgccaccgca gcctcggcat cgcggttgac gaacgcgtcg
     1021 aggacgtcgt gcaccatctg ggtcgcgatc cgcgccattt ccggaagcag cgacagcggc
     1081 tcgatctgcc ctgcgtcctc cagcttgggc actcgacggg cgatgttctt ggcatagtcg
     1141 ccgatccgct cgacaactcc cgagatcttc agcgcggcga ctgcttcgcg caggtctccg
     1201 gccatcggcg cgcgaagcgc gatcaattgc accactcgcc cctccgtctc gatttccagc
     1261 ctgtcgagct tcttgtcgtc ctcgacgacc ttgcgggcgc cttcgagatc gcgctgggca
     1321 aggcagcgca tggcttcgcc gatggcatgc tcggcaagcc cgcccatctg ggcaatcagg
     1381 gcgcgaagcc ggtcgatgtc ctcgtcgaac gccttgagcg tgtgttcgcg cggttgctgc
     1441 attgcgactc tccgatcagc cgtaccggcc ggtaatataa tcctgggtcc gctggtggcg
     1501 ggggttggtg aagatgtcct tggtcttccc atactcgatc agctcgccga gatggaaaaa
     1561 ggcagtgcgc tgcgaaactc gcgccgcctg ctgcatattg tgcgtgacga tcgcgatcgc
     1621 atatcggccg cgaagctcgt ggatcagctc ctcgatcttg gcggtggcga tcgggtcgag
     1681 cgccgaggcc ggttcgtcca tcaggatgac ctcggggtcg accgcgatag tgcgggcgat
     1741 gcacaggcgc tgttgttgtc cacccgagag agccgttccg ctgtcctgga gccggtcctt
     1801 gacctcatcc cacaagccgg cgcgcttgag cgaattctcg acgatctcgt cgagctcctg
     1861 ccggccggtg gcgaggccgt ggatccgcgg cccgtaggcg acattctcgt agatcgactt
     1921 ggggaagggg ttcggcttct ggaacaccat tccgacccgg gcgcgaagct ggaccacgtc
     1981 catcttggac gagttgatgt cctcgccgtc gagctcgatt cggcccgtga cccgagccgc
     2041 gggaatcgtg tcgttcatcc ggttgaggca tcgcaggaag gtcgatttcc cgcagcccga
     2101 cgggccgatg aaggccgtca cccggtcgtc gtgaatgtcg atcgaaacgt ccttgagcgc
     2161 ctgcttgtcg ccatagaaga cgctgatgtc gcgggcgcgc attttgggag ttctcggtcc
     2221 gggcaactcg tcggcggcct ggccatgttg cggtagcgtg tcgatttcgg cttcaggtgt
     2281 catttggctg cctcaccagc gctgctcgaa acggttgcgg aggtaaatcg caaggccgtt
     2341 catcagcagc atgaaaatca acaggacgat gatcgcggcg ctcgtcttct cgacgaagcc
     2401 gcggctcacc tcgtccgacc agaggaaaat ctggaccgga agaaccgttg ccggatcggc
     2461 gatcccgtcg ggaggggtgg cgatgaaagc gcgcattccg atcatcagca atggggcggt
     2521 ctcgccgagc gcgcgggcga ggccgatgat ggtgcccgtc aggattcccg gcagtgcaag
     2581 cggcaggacg tggtggaaga tcacctgcat ccgcgaggct ccgaccgcga gcgcggcatc
     2641 ccggatcgag ggcggaaccg acttgatcgc gttgcggccg gcgatgacga tcaccggcat
     2701 ggtcatcagc gccagcgtca ttccaccaac cagcggcgct gacctcggca ggtgcatgaa
     2761 attgaggaac acggccaggc ccagcaaccc gaagatgatc gacggaaccg cggcgagatt
     2821 gttgatcgaa acctcgatga ggtcggtcca ccggttccgg ggcgcgaatt cttccagata
     2881 gactgcggac aggactccga ccgggaaggc gatcaggatc gtgaccagga tggtgaagaa
     2941 gctccctttc agagcgcccc agactccgac cgccgacgga tccgtggcgt ctgactgggt
     3001 caggaagccc aagttgaagc gggtccggag caaatcgcgt tgctcaagct ggctcgccag
     3061 ctgctccgcc tcggcggagc cgtcgccctt ggcggcttgg ccgataccgc tcgcaaccgg
     3121 aagccagagg atcgcgcgct cgcgaagcag gtccggatcg ccaatcaacc gactgcccag
     3181 gtcgcgcgct gcagcggtgc cgaacaggtc cttggcccgg gctccataag cgacggtcgc
     3241 ggactgggcc aaaatgcctt ccaagtcggc gcctgcgatc gcctggcgcg cctcatcgcc
     3301 ccgaagcgcc gccgggtcga ggatgaggtc ggaacgcggg aagtcgaccg ggaccgcggc
     3361 ctggacctgg gtgaagccgc caacgccgcg ccaggccatc gtgatcagaa ggaaggcaag
     3421 gaacagcgcg gagagcgata ctgcggcgag gccgatcaag cggaaccggc gctcggcggc
     3481 atagcgcctg cgaacgcgcg aatccatcga accgtcggtc caccgcgacg cggcagcggc
     3541 gctggagccg ggcctattca taggcttccc gatatcggcg caccacggac agggcgatga
     3601 ggttgagcac cagcgtgatg acgaacagcg cgagtccgag cgcgaacgcg gcgagggtct
     3661 tggcgctgtc gaattcctgg tcgccggtca gcagctggac gatctgagtc gtcaccgtcg
     3721 tcacgcttgc gaacgggttg gcggtgagat tggcggcaag gccggccgcc atcaccacga
     3781 tcatggtctc gccgatcgca cggctgaccg ccaacaggat tccgccgacg actccgggaa
     3841 gggcggcagg aaggatcacc ttgcgaatgg tttccgattt ggtggctccc atcgcgaggc
     3901 tgccgtcacg catcgcctgc ggaacggcgg cgatggaatc gtcggccatg gagctgacga
     3961 acgggatgat catgatcccc atgaccagcc ccgctgccaa agcgctttcg ctgctggccg
     4021 aactgatccc gatcgcgatc ccgaaatcgc ggaccgcagg ggctacggtc agcgcggcga
     4081 aatagccgta aacaacggtc gggatgccgg cgagaatctc gagtatcggc ttcatccacg
     4141 aacggaccgc gcgcgaggca tattgagtca aatagatcgc gctcatcagg cccagcggga
     4201 tggcgacgat catggcgatg atcgcgccga tgaacaaagt gccccaaagc aagggaatcc
     4261 agccgaacgc gcccgacgaa ccgacctgat cggcgcggat cgcagtttgc gggctccagc
     4321 tcaggccgaa caggaattcg ccgaccggca ccctggaaaa gaagcgcagg ctttcgaaca
     4381 tcagcgagag gacgattcca agcgtggtca ggatcgcgac catcgacgcg gccaccagca
     4441 gtgccatcat ccaccgctcg acgccggtgc gcgcgcggaa gcccaacctg gtgcggcgcg
     4501 aggcgaagaa ggcgccgccg aggccgatca gcaatgcgag ggtgccacca atggtcgaat
     4561 aggtcgtctc ggcggcttgg aagcggggag cgagcgacga ggattcgggg ttgaacccgg
     4621 cttcgcgttg cccccgagcg atctcgcgag cttcggcgag gatggcctgg cgctgcatgt
     4681 cgaaatcggg aagcgcctgc ccttcggcac tggcgagcac ggcctggttg acgaatccgg
     4741 tctgcaccgg tgcccacagg gccaggaaga gcaaagcggg aagcgccgcc cacaggaagg
     4801 tgtgggcagc gtgataaacc ggaagcgagt gaagccggcc ctttgcccgc agacgatcgg
     4861 cccgattgaa actcagccag gccgccgctg ccgcaatgag gatgacggcg gcgagcgcaa
     4921 tcacaagagt catcgcgctc gccagccttt cctacttgag ctcggccgag tcgagcggct
     4981 tcagcgccgt cgactgctgc tgctgcgccg tggcgtcggc gcccctgaac ggcaccagcc
     5041 cgcggcgctg gagcgggccg ccttcctggg ccatcgtcgc gaacatcgcg atgaagtcgc
     5101 gcatcgccgg cttcgcccgc atgtgcgcgg tcttggcgta gatgaagatc ttgcgcgcgc
     5161 cgggatagct gaggtcggtg atcgtcgtgt ccgatggact aacgccattg acggttactg
     5221 cacgcacctt gtcccggttc tcggcgagga agctgtatcc gagcacgccc agtgctgtcg
     5281 ggtctgccga gaccttctgg accagcaagt tgtcgttctc gccggcctcg acgaaggcac
     5341 catcctcccg gatcttcgtg cagacctcct tgtattcgtc ctcgttgctt tccttgagcg
     5401 ccttcatggc gggctccgag gcgcaacctt tttcgagaaa cagctcgttg aggctgtcgc
     5461 gggttccgga agtcggggga gggccgagca cccggatccg ggtcgcaggg agggacggat
     5521 tcacatcctg ccatgtctgg gcggtctgtt gcttgccgaa cggccgggcc gccagcgccg
     5581 catagaggtc gcggagcgtg agctcgatcg gttcgccgct tgtcgattcg atgattgcga
     5641 gaccgtcgat cccgaccgga aattcgacga cctctttcac gccgttgctg ttgcagtccg
     5701 caagctcact gcttttgatc cgccgcgagg cgttggtcat atccgggaat tgcgacccga
     5761 cgccctggca gaacagcttc atgccagcgc cggtacctgt ggattcgacg atcacgctgg
     5821 tgccgggatt ggcgcgctgg aattcctcgg cgaccgctgt cgtgaatgga tagaccgtcg
     5881 acgagccgac gatcttgatc tgggcgcccg atgcggagcg gtccccgccg ccgccgcatg
     5941 cggcaatcat cgctgcgagc ggcagcacga aaagtgactt gttcatggat tctcccttgc
     6001 cgggctttgt cccgcaaggc cgctttagcc gccgttgctg acgcccttat tgcgggagct
     6061 ttgcactttt gtgacagtca ccggatcggc aggcggatcg tcacggtcgt tcctgcgccc
     6121 ggcgtgctgt cgatcgccag ggtgccgcgg tggcgctcga cgatatgctt gacgatggcg
     6181 agcccaaggc ccgtgccgcc ggctgcgcgg ctgcgcgcct cgtcgacgcg gtagaaacgg
     6241 cgcgtgagga acggcaggtg ctggcgcggg attccggggc cagtgtcgct gacttcaagc
     6301 cggatccggt ccccctccac ggccgcggaa gcgcgaatct tgcagccttc ggaggcgcag
     6361 ccgtagcgca ccgcattgct gagcaaattg tcgacgagct gggtaagttg ggcgaagtcg
     6421 ccgtgaatct tcggcagctg ctgctgcaga tccaggtgga gctcgcagcc gcactcccgg
     6481 gccgctgggc cggccctttc caccgcgctt tcgaggatcg atgcgagcgc gacagtgtcg
     6541 gacggtgtga cgaagcggtc ggcctcgatg cgcgagaggc tcatcaggtc ctcgatgatc
     6601 cgaagcatgc gcgtggcttc ggtgcggatg gtgccggcga acttcgcggc gagcttggga
     6661 tcgaggtcgc cgtcctcgag gctttcggca tagccgagga cggccgtcag cggagtgcga
     6721 agctcgtggc tggcattggc aacgaaatcg acgcgcatct tctcggcggc gtgggcggcg
     6781 gagcggtcga tcaacctcag gagtagtccg ccgccgtcga tctggcgggc cgacagccgc
     6841 cacggcctgc cgacggcgcc gacgccggta aaatcgatgt cgccgggttc gccggcgagg
     6901 acgaattcga gcgccgatgg atggcggatg gcgaggcgga cgtcgctccc ctcgaccgcg
     6961 ccgccgagca acgccttggc tgcatcgttg gcgatccgca ccgtccggcc ttcgacgatc
     7021 agcgcaggat cgtcgaaggc attgagcagt gccgccgcgg ctgggtcagg tccggccatc
     7081 gagacgacgt tagcggatgt cgccatggtc gttccagcgg cagagcgagc gccgagtgag
     7141 ggcttagaaa tcgacctggg accgaaggcc tatcatgtcg acgctatagt cgcggtcgcc
     7201 ggcgggcgtg gcgatcgccg catcgctata gacgatgtgc gcgtagttga ggccgaacat
     7261 caaataatcc atcggcttcc agttcagcga cgcctggtag gcgttctgct tgccgcccat
     7321 tatcccggca tcgttgaggt cgaggtggtc gaagcgaatg ttggcgccga gagagcccca
     7381 gccgcccttg tcgagcgggc gcttcacttt cacgcggtcg aacttgccgc ccttataccc
     7441 ccgcgattcg ccggtgaaga aatagccggc atcgacatag gcgccgaaga aggtcgggtc
     7501 cggaaggccg ctcattcggc caaccttctg ccagtaagcc tcgcttgcga cgtagaaggg
     7561 cccgaagatc ccggccgctt ccagtccgta agccgtttcc gattccgcgt ctgcaatgct
     7621 gccggtgtcg acgaagcgca cgtcggtggt gtggatggcg ggtcgctggc gatagcggac
     7681 gctggtcgcc gaatcgttga ggtcgcggtg gtggaaggac ccggcgaagt ggagctggtt
     7741 cttccccatt ttcggcatga agacggcccg cgtgtcgaag ccccagctgt cgttgtcgtc
     7801 gccgacagag ttgaggtcgg cgatattgtc ggtgaagact cccgcctgga ccagcagcgc
     7861 cttcttctcg aactggccgg agatgcccac ccggcgctcg aaattgaacg cgtcggtgaa
     7921 cgcagcgcgc tcgatgaacg cggtgtggag cgaactcgtc agctcttcca gcgactggaa
     7981 accattgtgc tggccgacga tcacctccca agggcctttc gagtaggaga gataggcgtc
     8041 ggtgaactcc ggatcgccgg ccgcgaaatc gagctcgagc ttatagccga aatttcccgg
     8101 cagcttgcct tcgaccccga gccgcccgcg gcgcagctcg ttcgagaagc cgagaccggc
     8161 attctcgtag ccggcgggtc ggctgacgtg cccgaagtcg tacatgaggc ggccgcgcgg
     8221 cttgaacgac cagccgtcgc cctcgatcac cggagcgccc ttccagctga tcttggccgc
     8281 cggggccggc gcggcttccg ccttcgcggc ggcagcttcc tgggccgcct tcagctcatc
     8341 gagctgcgcc tgcatcgcct cgatctgcgc ctgaagcgcg gcaatgtctg gcgttgcggg
     8401 cgccgtctgg ccggcggcag gggccgcgaa agccgcagag gcgagcagga tgggcagaag
     8461 tgtcttcatg gcgagtcagg ttcctctcaa gtgcagtgcg gctgcatcta gagcgcgact
     8521 gctacgccgc catgactcga ttgtgacacg attattacgg aagcgcatat gaaacgggcc
     8581 gagccttgcg gcccggcccg agtctcctcg cccccaagga aacttgtgcg ttaagcgcgg
     8641 tagaagatgt gggcgccgat cttgtcgacg tagctcagcc ggcggcccca cgacgggtgc
     8701 acataatcgg catggtacca aagaacgtcg gtgggcaccg tcggcacggc gttggccatc
     8761 gccaggcggg caacgccctg ggcctttgcc caagcggccg actggtaatt gatcgcggga
     8821 atgcgaccgg tgtgcggatt gacgaacgag aattgccacg gctgagtcat cacttcgcac
     8881 caggtcggcg gatacctgtc cgacgcggcg cggttcatca ccacgcgggc gacggcgagc
     8941 tgaccgtcga gcgattcacc gcgagcttcg aaatagaccg cggtggcgag acaggtcgcc
     9001 tgctcgtcga gcgcgactcc ggcgctgtag cggtcgacca gagcgtaaag cggccagccg
     9061 gcattgtgga gccagcggcc ttcgcgggcg atcctgccaa gctcggcctg gcgcgggtcg
     9121 ctctgggtac cgaacaccga accgacggcg ctcgagaaaa gattggttgt ggacgtgatc
     9181 gtgcgctgca cggccgaaag gaccggagct gcctgcctgg cgcccaccgg cgcggcagac
     9241 gtcttcgaag cgtccgattt cagggaataa ttggttttga ccaactgcgc cgcctgcgcg
     9301 gcggcagtgc cggcgccgaa agtaagcatt accgatccga tggccgcgac gaggccgcgg
     9361 ctgaatagct tgttcaattc tgtctcttgc ccttggcggc cggccggtca cagggattgc
     9421 aggcgccgtc aggcgtctgt gctagaaatc cgtctgtaaa gggtcgtccg tcttgcccgg
     9481 agcctggcgt cttacgcgct cttggctcac tcgctctcgt ttaaccgatg cagtccaaat
     9541 aaggattaat cggggcgtgc caaccagcgt ttcggcgagt tgagccagac gcgggacgaa
     9601 tgatgcaacc tattgaaagc gctgaataaa atctgaagat tttggcttct gtgagcctga
     9661 ggctaagtgc gctggaaggg agaatcgaat ggcgcgctgg ctgatgaagt ccgaaccctc
     9721 cagctacagc tggcaggacc tggtccgcga cggctccacc gaatgggatg gagtccgcaa
     9781 caacgccgcc cggctacatc tcaaagccat gaagcgcggc gacgaggcat tcttctacca
     9841 cagcatggat gaacgctcgg tgatcgggac catgcgcgtg gcccgcgagg cggcgccgga
     9901 tcccaaggat cccgactggg tgtcggtgaa ggtcgagccg gtaacggcgc tcccgaggcc
     9961 ggtaagcctg aaagagatca aggccgagcc gcggctggcg aagatggagc tgattcgcca
    10021 gtcgcggctg tcggtggcgc cggttcgtga cgaggagtgg gcgctcattc tcgccatggc
    10081 aggcaagcca caacggtgag ggaaggggct gctcgcgcgc tctcgcgcgg ggaaaactag
    10141 agcagcccca actcgcggaa gctggcgcag cggccagccc caaagaccag atggtcgacg
    10201 agcaggcagt cgagcgcctc ggcagcgcag gccaaacggc tggtcgcccg cttgtcgctg
    10261 tcgctcggag tcggatcgcc gctgggatgg ttgtgggcga ggaggatcgc tcggctgccg
    10321 tggaccgctg cgtcgccgac gatcctgcga agcgggaaat cggttccgaa ttcatccccc
    10381 gggtgccggc tgacgtggag gcagcgggat tcgcggtcga ggtgcgcgac ccacagcgtt
    10441 tcccgggaca agtccgactc cgccaggcag ccggcgaaga actggcgggc ggccgccgga
    10501 ccgtcgatct tctttggagg ctcggcacgc tgatgaagca cggacaaatg cctatcccgg
    10561 caggccctgc agcacgatca gaactgcgtc ccttgtggag gggcaaacat ccggaatgac
    10621 agcgaactcc gcagacaaaa gaaccgaata ggtaaaaagg gcttgacagc gtaacgctct
    10681 ttcggtacat cctgcaacag tcgagaaatg ccgattcggg ccgggcgcca gccgccgcgg
    10741 ccctttttgt tatggagaat tcaagtggcg aaacggggca tccaaagggc agggagagcg
    10801 aagctgacga tagccggcgg cgccagcccc aagctccgca ggccccgcag gcacgagtgg
    10861 acaaaggcga aggaagccag gttcctcgag acgctggccg agacctgtaa cgtgacgatt
    10921 gctgccgaag cggcaggaat gtcggttgcg ggcgcctatg tgcgccggaa gaaaatcgcg
    10981 gcgttccgcg ccggctgggc ggaagcgatc gcgaccgcct accagcggct ggagctggtc
    11041 atgctcgacc gcgccttgaa cggcaccgag aaggtcgtcg tccgcaagga tggatcggaa
    11101 gagaggatgc gcgaatatcc gaaccagatc gcgctccacc ttttgaagat gcaccgcgac
    11161 agcgcgatgg aggcgatcga ggatgcggag gaagccgact ccgccgaggt ccgcgagcgg
    11221 ctcgtcgaga agctggagcg gcttcgcaag cgcttcgagg cggaagacgc gggcaagtga
    11281 gcttcgagtt gacgcggcac cagatgaggc tgctggccaa cgcatccatc ggcgagaaaa
    11341 ggcgcgtcat cggagcgatg acggttgccg atgcatggga tttcgacgcg gagttcgaaa
    11401 actgggcgca caaggcgcag cttccgccat ccgatgaagg ttggcgcacc tggctgatga
    11461 tggccgggcg cgggttcggc aagacccggg ccggcgcgga gtgggtggag aagatcgccc
    11521 ggagcaggcc gggcgttcgg atcgcgctcg
//
LOCUS       DATAKH010000227         7467 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_34008,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000227 DATAKH010000000
VERSION     DATAKH010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7467
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34008"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1023)
                     /locus_tag="VHN55_09670"
     CDS             complement(<1..1023)
                     /locus_tag="VHN55_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HEX2804229.1"
                     /translation="MTPTGKDSLNTRSTLTVGSKTYTYYSLAKAADTLGDISRLPFSM
                     KVLLENLLRFEDGETVTAKDLQSMAGWLQERRANREIQYRPARVLMQDFTGVPAVVDL
                     AAMRDAMTQLGGDPQKINPLVPVHLVIDHSVMVDEFGTPRAFEKNVEFEYERNFERYQ
                     FLKWGSQAFDNFKVVPPGTGICHQVNLEHIARCVWTSDSDGETLAYPDTLVGTDSHTT
                     MVNGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFRLAGQLNEGITATDLVLTVTQM
                     LRQKGVVGRFVEFYGPGLASLPLADRATIANMSPEYGATCGFFPIDERTIDYLRLTGR
                     DEEQIEL"
     gene            1291..1479
                     /locus_tag="VHN55_09675"
     CDS             1291..1479
                     /locus_tag="VHN55_09675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804230.1"
                     /translation="MAHDRDYFRRRAAEARAAAFRREESEDAEVAGQLALAYAALARR
                     GTKAEMERTAKAAEEVDA"
     gene            complement(1476..2453)
                     /locus_tag="VHN55_09680"
     CDS             complement(1476..2453)
                     /locus_tag="VHN55_09680"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEX2804231.1"
                     /translation="MLRAYGPGCDGKAIDADRQKIPSHATWIDLEEPTRAEEELVERC
                     LEVAVPTPEEMAEIEPSSRLYSTNGVLYMTVSVLYGVEDNAPASAPMGFVLTDDRLVT
                     VRYVTPKPVRAFADHVRREPELAADALTALCGMLDSLVDRLADELEKVGAEIEKISSH
                     IFSPTVDARRIPVPRLTALLTRIGKTQLLLAKIRESETSTSRLLSFLSGTPRLRSRKA
                     ADAREHVASLAADASSLSNHSGFLADHLYFLLDAAVGLISIEQNAAMKLFSWAALVLL
                     PPTLVGAIYGMNFDFMPELHWRLGYPFALALMLASAVLPLWYLKRRGWL"
     gene            2518..3102
                     /locus_tag="VHN55_09685"
     CDS             2518..3102
                     /locus_tag="VHN55_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017500114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2585 family protein"
                     /protein_id="HEX2804232.1"
                     /translation="MTRNSRTTIAALLIFAVAAGILMAMGRSPICTCGQLALWGPVGP
                     TQSQMLADWYSLSHIVHGLLFYAALWLVARSWPVERRFLAALAVEALWEIVENTPMVI
                     DRYREATAALGYTGDSIVNSLSDMAMMAAGFLAARKLPLWASIVLLLALELLPLLVIR
                     DNLLLNVWMLLAPNDFIREWQSAAFGLAIGPGLA"
     gene            3113..3565
                     /locus_tag="VHN55_09690"
     CDS             3113..3565
                     /locus_tag="VHN55_09690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007682761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX2804233.1"
                     /translation="MAGRYFDEWKVGDKVSHAISRTVTETDNVLISTLTHNPQPMHLD
                     HDFASQSEFGMPLVNSIFTFGLMIGVSVADTTLGTLVANLGYDGLKFPNPVFVGDTLR
                     SETECVAVRESKSRPNAGIVTWAHRSFKQSGELVCECTRTALLLKTPQ"
     gene            3562..4413
                     /locus_tag="VHN55_09695"
     CDS             3562..4413
                     /locus_tag="VHN55_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010183201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX2804234.1"
                     /translation="MRSDPRSWLFVPADSEKKIGKAIESEADAIIFDLEDSVVSTRKA
                     AARDILKGLGKRSGGPDWWVRVNPLGTAHHKDDLDLISRSDVTGIVLPKAESGADVVE
                     LAHRTGNIPIHAIVTETAASLFGLLSYRNPQSPLVAMSWGAEDLSAALGASSKYDFDG
                     ELAFTYKLARSLCLAGAVAAGVQPVDGVFADFRDDSGLRRECEAAQREGFTGKLAIHP
                     AQVPVINDAFLPTPEEIGHAKAIIEAFEAEPDAGTISVGGRMVDRPHLDQARRVLSRA
                     RGVANDV"
     gene            4444..5502
                     /locus_tag="VHN55_09700"
     CDS             4444..5502
                     /locus_tag="VHN55_09700"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015456983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEX2804235.1"
                     /translation="MTSKARAWGTKGPTEPLEPMTIDRRDLRPEDVAIQISHCGICHS
                     DLHFAHDDWGMAQYPMVPGHEIVGTVTAVGSGVTRYKVGDRVGVGCLVDSCMTCQYCR
                     SGHEQFCVEMPTFTYSAPDRLSGEITQGGYSEHIVVREEFVCRLPDSIDFAHAAPLLC
                     AGITTYSPLKRWGVKKGDKVAVAGLGGLGHMAVKMAKAMGAEITVLTTSPEKAEAARA
                     NGASEVIVSTDPAAMEAASGRFDVLVDTVPVKHDIDPYVGLLAPNGTLVLLGAVEPLP
                     GLNGFNLIFGNRVVAGSLIGGLPETQEMLDFCAANAILPDIEVIPAQKINHAWDTLGK
                     GDTPHRFVIDIKSLEAGG"
     gene            5499..7427
                     /gene="acs"
                     /locus_tag="VHN55_09705"
     CDS             5499..7427
                     /gene="acs"
                     /locus_tag="VHN55_09705"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX2804236.1"
                     /translation="MNGAIHPVPQDFHAKIGPDELRSLNDRAQRDPDGFWLEQAKRLD
                     WTKFPTRAGDCSFDEDRFQIEWFADGQLNLSVNCLDRHLEKDGDRTAVIFEADQPGEG
                     RRVSYRELYGETCRFANLLKSRGIGRGDRVMIYMPMIPEAAAAMLACARIGAIHSVVF
                     GGFSPESLAGRIADCDACCVITADEGVRGGKPIPLKRNVDEALAHRDVATVIVVTRTG
                     ADIALKQGRDISYSELRDSLSTACEPEAMNAEDPLFILYTSGSTGKPKGVVHTTGGYA
                     VWAATTFEWVFDYKPEDIFWCTADIGWITGHSYVVYGPLACGATSVMFDGVPNYPDFG
                     RFWETVDRLGVTIFYTAPTAIRALMREGDEPVKRHSRQSLRLLGTVGEPINPEAWEWF
                     WRVVGDERCPVVDTWWQTETGGIMISPFPGATAMKPGSATHPLPGIEPLLLDPQHQVL
                     EGAASGNLCLASSWPGQMRTVWGDHERFFQTYFSTYPGLYFTGDGCRRDEDGYYWITG
                     RVDDVINVSGHRIGTAEVESALVAHPKVAEAAVVAYPHDIKGQAIYAFVTLNAGEEGD
                     DAVRAELNQEVRKDIGALAAPEKIHFTPALPKTRSGKIMRRILRKIAENDFSNLGDTS
                     TLADPSVVENLLRERLVK"
BASE COUNT         1372 a         2397 c         2381 g         1317 t
ORIGIN      
        1 gagctcgatt tgctcctcgt cgcggcctgt caggcgcagg taatcgatgg tgcgctcgtc
       61 gatcgggaag aagccgcagg tggcgccata ttcgggcgac atgttggcga ttgtcgcacg
      121 gtctgcgagc gggaggctgg cgaggccggg cccgtagaat tccacgaacc ggccgaccac
      181 gcctttctgg cgaagcatct gggtcaccgt cagcacgagg tcggtcgcgg tgatgccttc
      241 gttgagctgg cctgcgagcc ggaagccgac gacttccggg atcagcatcg acaccggttg
      301 gccgagcatc gcggcctcgg cctcgatccc gccgactccc cagccgagta ctccgaggcc
      361 gttgaccatc gtcgtgtggc tgtccgtgcc gacgagcgtg tcgggatagg cgagagtttc
      421 gccatctgaa tcgctggtcc acacgcagcg ggcgatatgc tcgaggttga cctggtggca
      481 gatgccggtc cccggcggga ccaccttgaa attgtcgaac gcctggcttc cccacttgag
      541 gaactggtag cgctcgaaat tgcgctcata ttcgaactcg acgttcttct cgaacgcccg
      601 tggagtgccg aactcgtcga ccatcacgct gtggtcgatg acgaggtgga cagggaccag
      661 cgggttgatc ttctgcgggt cgccgccgag ctgggtcatc gcgtcgcgca tcgccgccag
      721 gtcgacgaca gccggaaccc cggtaaagtc ctgcatcagg acccgggccg ggcggtattg
      781 aatctcgcga ttggcccgcc gttcctggag ccatcctgcc atcgactgca gatcctttgc
      841 ggtaaccgtc tctccgtcct cgaagcggag gaggttttcg agcaggacct tcatcgaaaa
      901 tggcagccgg gaaatgtcgc cgagcgtgtc cgccgccttg gcgagcgaat aatacgtgta
      961 agtcttcgag ccgacggtaa gcgtcgaacg cgtgttgagg ctgtccttgc cggtcggcgt
     1021 cattctctat ccttgatgct ttgcgtcggc gcgtgtgcgc cttggtcgcg cgagccttta
     1081 gcaaccggga aacgcgcccg caaagccata ggttcagagg accggaacta tggtcctaac
     1141 gccagcccgg cgctggctcg ccattcctcg tttcgcttgc gttcgattgc tcccgcggcg
     1201 ggacggggtg aggctcgcgg actcccatta agatggcggt cggactaata tggcttgctc
     1261 cggatttaac ggggcaggaa ggagccgtgg atggcgcacg accgcgacta tttccgccgg
     1321 cgcgctgccg aggcgcgggc tgccgccttt cgccgcgagg aaagcgaaga cgccgaagtg
     1381 gccggccagc ttgcgcttgc ctatgccgca ctcgcccgac gagggacgaa agcagagatg
     1441 gagcgcactg cgaaggctgc cgaggaagtc gacgcctaaa gccaaccgcg gcgcttgaga
     1501 taccacagcg gcaggactgc actcgccagc atcagggcga gcgcgaacgg ataacctaac
     1561 cgccagtgaa gctccggcat gaaatcgaaa ttcatcccgt agatcgcgcc gaccagggtc
     1621 ggcggcagaa gcaccagcgc agcccaggaa aacagcttca tcgcggcatt ctgctcgatg
     1681 ctgatcaggc ccaccgcggc gtcgagcagg aagtagaggt gatcggcgag gaagccgctg
     1741 tggttgctta gcgacgacgc gtccgcagcc aggctggcga cgtgctctcg agcgtccgcc
     1801 gcctttcgcg accggagccg cggagttccg ctgaggaagc tcaatagcct gctcgtgctg
     1861 gtttcgctct ctcggatttt tgcgagcagc aactgagtct tgccgatacg cgtcagcagc
     1921 gccgtcagcc gcgggaccgg aattcgccgc gcgtcgacag tcggcgagaa gatgtggctg
     1981 gaaatcttct cgatctcggc acccactttc tcaagctcgt ccgcaagccg gtcgacaagc
     2041 gagtccagca tcccgcacaa ggcggtgagc gcgtccgcgg cgagttccgg ctcgcgccgg
     2101 acatggtcgg caaaggcgcg gaccggcttg ggagtgacgt agcggacggt gaccagccga
     2161 tcgtccgtca ggacgaagcc catcggcgcg ctcgccggtg cattgtcctc gaccccgtag
     2221 aggacgctga cggtcatgta gaggacacca ttagtcgaat agagccggct ggacggctcg
     2281 atttcggcca tctcctccgg cgtcggcacc gcaacctcca ggcaacgctc gaccagctcc
     2341 tcttcggcgc gagtcggctc ctcaaggtcg atccaagtcg cgtggctcgg gatcttctgg
     2401 cgatcggcat cgatcgcctt accatcgcat ccagggccat aggcgcgcag catcgaacgg
     2461 attgatcgac tgaacggccg ggctttgcaa gccggaccgc tctgctacgc gtccgcaatg
     2521 acccgtaatt cccgaaccac gatcgccgcg ctcctcattt tcgcagtcgc agcgggaatc
     2581 ctcatggcca tgggccgctc gccgatctgc acctgtggac agctggcctt gtggggacct
     2641 gtcgggccga cccagagcca gatgctggcc gactggtaca gcctcagcca tatcgtccac
     2701 ggcctgcttt tctatgcggc gctgtggctg gtcgcgcgga gctggccggt cgagcgtcga
     2761 ttcctcgccg cgctggcggt cgaggcgctg tgggaaatcg tcgagaacac gccaatggtg
     2821 atcgaccgct atcgcgaggc gaccgccgcg ctcggctaca ccggcgattc gatcgtcaat
     2881 tcattgagcg acatggcgat gatggcggcg ggctttctcg ccgcccgaaa gctgccgctt
     2941 tgggcgagca tcgtgctgct tcttgccctc gagctgcttc cgctgctggt catccgcgac
     3001 aacctcctcc tcaacgtgtg gatgctgctg gcccccaacg acttcatccg cgagtggcag
     3061 tcggcggcat tcggcttggc aatcgggccg ggcctcgcct agacccgcca acatggccgg
     3121 acgctatttc gacgagtgga aggttggcga caaagtcagc catgcgatct cccgcaccgt
     3181 caccgagacg gacaatgtcc ttatttccac cctcacccac aacccgcagc cgatgcacct
     3241 cgaccatgac ttcgcatcgc aatcggagtt cgggatgccg ctggtgaact cgatcttcac
     3301 cttcgggctg atgatcgggg tcagcgttgc cgacaccacg cttggcacct tggtcgcaaa
     3361 cctcggctac gacgggctga agtttcccaa tccggtgttc gtcggcgaca cgcttcgaag
     3421 cgagacggaa tgcgtggcgg tgcgggaaag caagtcgcgg ccaaatgcgg gtatcgtcac
     3481 ctgggcgcac cgaagcttca agcaaagcgg cgagctggtc tgcgagtgca cgcgaacggc
     3541 gcttctgctc aagacgccgc aatgaggagc gatccacgaa gctggctgtt cgtcccagcc
     3601 gacagcgaga agaagatcgg aaaagcgatc gagagcgagg ccgacgccat cattttcgat
     3661 ctcgaggaca gcgtcgtctc cacgcgcaag gcagcggccc gcgacatatt gaagggtcta
     3721 ggcaagcgta gcggcgggcc cgactggtgg gtacgggtca acccgctcgg aaccgctcat
     3781 cacaaggacg atctcgacct gatctcccga agcgacgtga ctggtatcgt cctcccgaag
     3841 gcggaaagcg gcgccgatgt cgtcgagctc gcgcatcgca cagggaacat cccgatccac
     3901 gccatcgtga ccgagacggc ggcgagcctt ttcggcctcc tgagctatcg caacccgcaa
     3961 tcgccgctgg tggcgatgag ctggggcgcg gaagacctgt cggcggcgct cggagcgtca
     4021 tccaaatatg atttcgacgg cgagctggcc tttacttaca agctggcgcg atcgctgtgc
     4081 cttgccggcg cagtcgccgc cggggtccag ccggtcgatg gagtcttcgc cgatttccgc
     4141 gacgactccg ggctcaggcg ggagtgcgaa gcggcgcagc gcgagggttt caccggaaaa
     4201 ctggcgatcc acccggcgca ggtgccggtg atcaatgacg cctttcttcc gactccggaa
     4261 gaaatcggcc acgccaaggc aattatcgag gcgttcgaag ccgagccgga cgccggcacc
     4321 atttcggtcg gcggccgaat ggtcgaccgc ccgcatctcg accaggcccg tcgcgttctc
     4381 agccgcgcgc gaggagtggc caacgatgtc tgacacgagg gcctctgaag gggagaaatg
     4441 gcaatgacca gcaaggcacg cgcgtggggc acgaaagggc cgactgagcc gctcgagccg
     4501 atgacgatcg atcgccgcga cctgcgcccc gaggatgtcg cgatccaaat cagtcattgc
     4561 ggcatctgcc actccgacct ccacttcgcc cacgacgatt ggggcatggc gcaatatccg
     4621 atggtccccg gccacgaaat cgtcgggacg gtcaccgccg tcggatccgg cgtcactcgc
     4681 tacaaggtcg gcgaccgggt cggtgtcggc tgcctcgtcg acagctgcat gacgtgccaa
     4741 tattgtaggt ccgggcacga gcaattctgc gtcgaaatgc cgaccttcac ctatagcgcg
     4801 cccgaccgcc tgagcggaga gatcacgcag ggtggttaca gcgagcatat cgtcgtccgc
     4861 gaggaattcg tctgcagact cccggactcg atcgatttcg cacatgcagc gcccttgttg
     4921 tgcgcgggga tcacgaccta ctcgcctctg aagcgctggg gcgtgaaaaa gggcgacaag
     4981 gtagcggtgg ccggccttgg cgggctcggg cacatggcag taaaaatggc gaaggcgatg
     5041 ggggcagaaa tcaccgttct gaccacctct cccgaaaagg ccgaggccgc gcgtgccaac
     5101 ggcgcgagcg aagtcatcgt ctcaaccgac ccggcggcga tggaagcagc cagtggacgt
     5161 ttcgacgtcc ttgtcgacac cgttccggtg aagcacgaca tcgatcccta tgtcggcctt
     5221 ttggctccaa acgggactct cgtccttctt ggcgcggtcg agccgcttcc gggcttgaac
     5281 ggcttcaacc tgatattcgg caatcgcgtg gtcgccggct cgctcatcgg cggtcttccc
     5341 gaaacccagg agatgctcga tttctgcgcc gccaacgcaa tcctcccgga catcgaagtc
     5401 attcccgcgc agaagatcaa ccatgcgtgg gatacgcttg ggaagggcga caccccgcac
     5461 cgctttgtca tcgatatcaa aagcctcgag gccggcggat gaacggagcg atccatcccg
     5521 tcccgcaaga ctttcacgcg aagatcgggc cggacgagct tcggtccctc aacgaccggg
     5581 ctcagcgcga tccggacgga ttctggctgg agcaggcaaa gcggctcgat tggacgaaat
     5641 tcccgacccg cgccggcgac tgctcgttcg acgaggaccg gttccagatc gaatggtttg
     5701 ccgacgggca gttaaacctt tcggtcaatt gcctcgatcg ccacctcgaa aaggacggcg
     5761 accgaacggc ggtgattttc gaagccgacc agccgggcga agggcgccgc gtctcctatc
     5821 gcgagctgta cggcgagacc tgccgattcg cgaacctcct gaagtcgcgc gggatcggcc
     5881 gcggcgaccg ggtgatgatc tatatgccga tgatccccga ggcagcggcg gcgatgctgg
     5941 cctgcgcccg gatcggcgcc atccactcag tggtgttcgg gggcttctcg cccgagagcc
     6001 tcgccggacg gatcgccgat tgcgacgcct gttgcgtgat taccgccgac gaaggggttc
     6061 gcggcggcaa gccgatcccg ctcaagagga atgtcgacga agcgcttgcc caccgcgacg
     6121 tcgccaccgt gatcgtcgtc acgcgcaccg gcgccgacat cgcgctgaag caagggcgcg
     6181 acatctccta ctccgagctt cgggacagcc tttcgacggc ttgcgagccc gaggcgatga
     6241 acgcggagga cccgttgttc atcctctaca cgtccggctc gaccgggaag cccaagggcg
     6301 tcgtccacac gaccggcggc tatgccgtgt gggcggcgac gacgttcgaa tgggtcttcg
     6361 actacaagcc cgaggatatc ttctggtgca ccgccgatat cggctggatc accggccact
     6421 cctatgtcgt ctacggtccg ctggcttgtg gagcgaccag cgtcatgttc gacggagtcc
     6481 ccaattaccc cgacttcggc cgcttctggg aaacggtcga caggcttggg gtgacgatct
     6541 tctacacggc gccaaccgcg atccgggcgc tgatgcgcga aggcgacgaa cctgtgaagc
     6601 ggcacagccg ccagtcactt cgcctgctcg gaacggtcgg ggagccgatc aatcccgaag
     6661 cctgggaatg gttttggcgg gttgtcgggg acgagcgctg cccagtcgtc gatacctggt
     6721 ggcagacgga gactggcggc ataatgattt cgccgttccc aggagcgact gcgatgaagc
     6781 caggctccgc cacacacccc ctgccgggga tcgagccgct tctcctggac ccgcagcatc
     6841 aagtcctcga gggcgcggct agcggaaacc tgtgcctcgc ctcgtcatgg cccgggcaga
     6901 tgcgcaccgt ctggggcgat cacgagcgct ttttccagac ctatttcagc acctatccgg
     6961 gcctgtactt caccggcgac ggctgccgcc gcgacgagga cggctattat tggatcaccg
     7021 gccgggtgga cgacgtgatc aacgtctccg gccaccgcat cggaaccgct gaggtcgaga
     7081 gcgctctggt cgcgcacccc aaggtcgcag aggcagccgt cgtcgcctac ccgcacgaca
     7141 tcaagggcca ggcgatctat gcgttcgtca ccctcaacgc cggcgaggaa ggcgacgacg
     7201 ccgttcgtgc cgaactgaac caggaggtcc gcaaggacat cggcgccctt gcagcgcccg
     7261 agaaaatcca tttcacgcca gcgcttccaa agacccgctc cggcaagatc atgcgccgca
     7321 tcctgcgcaa gatcgctgag aacgatttca gcaacctcgg cgacacgtcg acgctcgccg
     7381 atccctccgt ggtcgagaac ctgttgcgcg aacgcctggt gaagtgaacc tcgccctgcg
     7441 ggcgcggtcg gtgcctcgca tggcttc
//
LOCUS       DATAKH010000228         2466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26873,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000228 DATAKH010000000
VERSION     DATAKH010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26873"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VHN55_09710"
     CDS             <1..459
                     /locus_tag="VHN55_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804237.1"
                     /translation="LASFFSPTGRLDERRDREPMLDLLFAAANTGTGKRAALSVPTFG
                     KTGTTQDNRDAVFVGFAGNLVVGVWIGRDDDKSLGKISGGTVPAKVWRDFMNSALAVD
                     RGRGPPIPATYRNRPRPPEKRPSPLPDEWSQQSGVLRELVRAVEEMLEER"
     gene            619..798
                     /locus_tag="VHN55_09715"
     CDS             619..798
                     /locus_tag="VHN55_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010124501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX2804238.1"
                     /translation="MAKFLKLIKNEKGATAIEYGLIAALIAVAAIAAMSNIGTSLGTT
                     FNGVSTCLNNAPAAC"
     gene            complement(904..1098)
                     /locus_tag="VHN55_09720"
     CDS             complement(904..1098)
                     /locus_tag="VHN55_09720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804239.1"
                     /translation="MVRYRLCFINPKTNQIDRERDIEAADDVDAAHVASESDHRPLEL
                     WCGDRKVRTFSADNLAAAGG"
     gene            1237..1659
                     /gene="ndk"
                     /locus_tag="VHN55_09725"
     CDS             1237..1659
                     /gene="ndk"
                     /locus_tag="VHN55_09725"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEX2804240.1"
                     /translation="MAVTRTFSIIKPDATRRNLTGAVTKMLEEAGLRIVASKRIQMSR
                     EQAEGFYAVHKDRPFYNDLCTFMTSGPVVVQVLEGEDAVKRNRDVMGATNPAEAAEGT
                     IRKCYAESIEANSVHGSDSDENAKIEIEFFFEPDEIVG"
     gene            complement(1709..2299)
                     /locus_tag="VHN55_09730"
     CDS             complement(1709..2299)
                     /locus_tag="VHN55_09730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804241.1"
                     /translation="MRLRTCVLLAFAHALLSACNVAVSERPMYSESQRSATILLEDGL
                     WVRSDPECSFDRGKPKNEWPNCADWIVVSGHFAVGGSDKKAGETPDDIFIAEGDPAIL
                     QAKLRINNEATETYLFAVINPVARADSGLVTSVDAWAVACGTETAGSGSSPKIEPYPG
                     FDKDCHPESVEALRKAALKSPTAETLRWEWVRPEQP"
BASE COUNT          473 a          778 c          755 g          460 t
ORIGIN      
        1 ctggcaagct tcttctcgcc caccgggcgg cttgacgagc gtcgcgaccg agagccgatg
       61 ctcgaccttc tgttcgcagc ggcgaacacc gggaccggca agcgcgcggc gctttcagtt
      121 cccacgttcg gcaagaccgg aacgacccag gacaatcgcg acgccgtttt cgtcggattc
      181 gccggaaacc tcgtcgttgg cgtgtggatc gggcgcgatg acgacaaatc gctcggaaaa
      241 atcagcggag gaacggttcc ggcgaaggtc tggcgcgact tcatgaattc ggcgctggcc
      301 gtcgaccgcg gccgcggccc gccgattccc gcgacctacc gaaatcgccc gcgcccgccg
      361 gagaaacggc cgagcccact gccggacgaa tggagccagc agtccggcgt gcttcgcgag
      421 ctggttcgcg ctgtcgagga gatgctcgaa gagcgctgac ggccagtcgt tcgggtcggc
      481 gaaggtaaac ggttggaaac ctgccccttt aagccttttt caactccttc ggtcctaatc
      541 ccttgatcaa cctacgcgaa gtttaacggc gcaggtgggg gagcttgtct cccgagtgga
      601 gccttaagga gactggacat ggccaagttt ttgaagctga ttaagaatga aaagggtgcc
      661 accgccatcg agtatggcct cattgctgct ctgatcgccg ttgcggcgat tgcggcgatg
      721 tcgaacatcg gcacctcgct cggaacgacc ttcaacggcg tttcgacctg tctgaacaac
      781 gccccggctg cttgctaatc tagcttccag ggttttgaga ctggcggcgg cgtcgaaagg
      841 cgccgccgct tttcttttgc ggtattacgg agcgcgaggt gcattgggcc gcgcaattcg
      901 gcgtcagccg ccggccgccg ccaaattgtc cgcgctgaac gtccgcacct ttcgatcacc
      961 gcaccacagt tccagcggcc gatgatccga ttcgctcgcc acgtgggcgg catcgacatc
     1021 gtcagccgct tcgatgtcac gctcgcgatc gatttgattc gtcttcgggt tgatgaagca
     1081 aaggcggtag cggaccatcg agatttcccc actggagcaa ttccaacgcg ccggcagccg
     1141 ctggtttcca actgccgtag ccatgcactt gccgcgggga gcgagcgcgg ctaggcgcgg
     1201 cgccaatccc acctcaattc aggagaccgt tcggccatgg ccgtcacgcg caccttttcg
     1261 atcatcaagc ccgacgcaac ccgccgcaac ctcaccggtg cagtcaccaa gatgcttgag
     1321 gaagcaggtc ttcgaatcgt cgcttcgaag cggatccaga tgagccgcga gcaggccgaa
     1381 ggattttacg ccgtccacaa ggatcggccg ttctacaacg atctgtgcac tttcatgacg
     1441 tcggggccgg tcgtcgtcca ggtcctggaa ggcgaagacg cggtcaagcg caatcgcgac
     1501 gtgatggggg cgaccaatcc cgcggaggcc gccgaaggca cgatccgcaa atgctatgcc
     1561 gaatcgatcg aggccaattc cgtccacggc tcggacagcg acgagaatgc gaagatcgaa
     1621 atcgaattct tcttcgagcc ggatgaaatc gtcgggtaga cccggcctgc cagcggcgcg
     1681 atggcccgga aacggcctgc ctgatcctct acggctgttc cggccggacc cactcccatc
     1741 gcagggtctc ggcggtcgga ctcttcaggg ccgccttccg aagcgcttct acggattcgg
     1801 ggtggcagtc cttgtcgaag cccgggtagg gctcgatctt cggggaagac ccgctcccag
     1861 cggtttcagt gccgcatgcg accgcccacg catcgacgga tgtaactaag cccgaatccg
     1921 cccgtgcaac gggatttatc actgcaaaca aataggtttc ggttgcctcg ttattgatcc
     1981 tgagcttcgc ctggagaatg gcggggtcac cttcggcgat gaagatgtcg tccggagttt
     2041 caccggcttt cttgtcagat ccgccaaccg cgaaatggcc ggaaacgacg atccaatcag
     2101 cacagttggg ccattcgttc ttcggcttgc cgcgatcgaa gctgcactcc ggatcggaac
     2161 ggacccacaa tccgtcctct aggaggatgg tcgccgatct ctgcgactcg gaatacatcg
     2221 gccgctccga taccgcgacg ttgcaagcgc tcaggagagc gtgggcgaag gccagaagca
     2281 cgcaggtacg aaggcgcatc atagtccccc cgtcgcgctt cgttacgcgt tcgaagcgag
     2341 tcgcaccagc cagtaggcta tcgactgagg cccaccaggt ggatcgagcg gccgccgaac
     2401 aggccgccgc cttcccagcg atagcgaagg cggtaggtgc cgccgccgcg gcggtcgctg
     2461 ccgctt
//
LOCUS       DATAKH010000229         8189 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_26890,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000229 DATAKH010000000
VERSION     DATAKH010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8189
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26890"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VHN55_09735"
     CDS             complement(<1..496)
                     /locus_tag="VHN55_09735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804242.1"
                     /translation="MAISSRFPALLPVVLLLSAAAAACQQGNDAPEQNDVDQAAAPAP
                     VIPRPQPPIDRAGLLTAVAQAASAAAAGTEVPEAIGSLDGRQFEVRIRFGCRGPAKDF
                     EQSWLGWSYDSEKRTLRVRAKPTISKEDPLVAGIAGDSFESVEGFWVPRPWLLQATCP
                     AAAAL"
     gene            582..1907
                     /locus_tag="VHN55_09740"
     CDS             582..1907
                     /locus_tag="VHN55_09740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017183728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEX2804243.1"
                     /translation="MTFDQVLTLLVLAAVVAALIWDKVRSDVVALAGAAFLLMTGVVR
                     PVEVQAAFASPAIVALASLFVIAYAMELSGLLDTAIAKVVALCRRIGAAGLWVLIALA
                     GALSAFLNNTPIVVLSAPVVRDVARSLNRSPKCYLIPLSYAAVLGGCCTLIGTSTNLL
                     VNDMAAVAGQPRFGIFEITPVGLWVAAAGGLYLLLFSSKLIRTENGNSKASSDEAADS
                     AEDFRAPGLAGGMIGHVQPFTAHVDLKPWQAIMSSAIFVAVVAAAALNIAPIAACAFA
                     GAVLLILMRVITADEAYHGLRPEVLMLIAGMIVLGIALDETGLAGEATNALIGSMENM
                     SPLLALIILYGATLFATEILSNATVAVLFTPVAVTMAEAFAVSPRPFLIAIMIAGSAA
                     FATPFGYQTNVIVYQMGGYNYMDFMKVGLPLNLITWIVGVIAIQYYFPF"
     gene            complement(2073..2159)
                     /locus_tag="VHN55_09745"
     tRNA            complement(2073..2159)
                     /locus_tag="VHN55_09745"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2123..2125),aa:Leu,seq:cag)
     gene            2246..3196
                     /locus_tag="VHN55_09750"
     CDS             2246..3196
                     /locus_tag="VHN55_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HEX2804244.1"
                     /translation="MINPDNRIVTVFGGGGFIGRYVCEQLFKEDVRVRVACRSPRSAY
                     FLQPLAAVGQFGAVRADVADAASVRTAVKGSFAVINLVGVLKGAFHATHVEGAKNVAE
                     AARDAGAESLVHISAIGADPESESAYGRTKGEGELAVRAAFPKATIIRPSVVFGPEDD
                     LTNRLAGLSRLPVLPVVAAERRFQPVYVKDLAKAIAQAALDPLGFGGNTFEIGGPQVM
                     TMEDIYAICARSAGREPEMPDLPNFASAFLSWFGFLPGAPLTRDQWKMLQRDNLPARK
                     AKGMEAFGIEPTALESVAPEWLQRYRQGGRWSAPAVEQAA"
     gene            3210..4022
                     /locus_tag="VHN55_09755"
     CDS             3210..4022
                     /locus_tag="VHN55_09755"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011446821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEX2804245.1"
                     /translation="MPILLIAIILGIVEGVTEFIPVSSTGHLILATELLGFNADQWKA
                     FNVIIQLGAILAIVVLYWRTFWAVLEGLFANQPMSWRFVRNVLIGFVPSAVLGFLLIN
                     NIEALLGNAVVVAWALILGGVAILVIEKTVKPGEIVGVAEMPLGRVVGIGVIQCLSMI
                     PGVSRSGATILGGLALGVERRTAAEFSFFLAIPTMLGATVLEIAKHHETLLADTTEVG
                     FGTVAVGFVVSFVVAIVVVRAFVHYISRHGFAPFAWYRIVAGTAALIWLTMR"
     gene            complement(4019..5383)
                     /gene="prsR"
                     /locus_tag="VHN55_09760"
     CDS             complement(4019..5383)
                     /gene="prsR"
                     /locus_tag="VHN55_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM-box response regulator transcription
                     factor"
                     /protein_id="HEX2804246.1"
                     /translation="MSTQPSLPVLLVVEDDEGLQRQLKWAYDGYTVVAAGDRQSALEA
                     LRLHEPAVVTLDLGLPPDPDGTDEGFATLREMLAIKPDTKIIVASGHGARESAIKAIA
                     LGAYDFYRKPIDIDELGLIVARAFHLHGIEEENRRLEATGSTVLGSIVTSSDEMLKVA
                     RTIERVASTNVSVMLLGASGTGKELLARAVHERSDRTAGPFIAINCAAIPENLLEAEL
                     FGYERGAFTGAVKSNVGKIELAQGGTLFLDEVGDIPLPLQVKLLRFLQERVIERIGGR
                     QPIAVDTRVVCATHQNLEAMLADGRFRDDLYYRLAEVVVKIPSLAERAGDAVLLARHF
                     TNRFAHEMKLNVQGLAADAVAAIDSYGWPGNVRELENRIKRAIIMADGKLVGAADLDL
                     PGAAVNGADFPINLRAAREVADRRAIRQALSRTDNNISGAAKLLGISRPTLYDLLKQY
                     QVTA"
     gene            complement(5380..7455)
                     /gene="prsK"
                     /locus_tag="VHN55_09765"
     CDS             complement(5380..7455)
                     /gene="prsK"
                     /locus_tag="VHN55_09765"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="XrtA/PEP-CTERM system histidine kinase PrsK"
                     /protein_id="HEX2804247.1"
                     /translation="MSPLVSFWSHALAATMFASLLVWRLGAGARQPGHRLLLAAFALT
                     ACWAWLQAIGPGEALARYSETARNLVWVGLLYSLYASSEGRQKGVRLVYGAVSAVLGF
                     QLVVTTIWVAARAGGAETGAAIDQTGTILRVTAAAGSLVLVHNLYGQAAPSSRSNIRF
                     AMLALALSWAYDLNFYTIKYLAPSAAGGLGDWRGVAVALTGPLFVLAARNEDDWRIRL
                     SRAATFQSLSLLGICAYFVVMAVLATALRGADGNWLRALSAGLLAVMVVAAMVLVPSP
                     RARSWAKVKIAKHLFEHRYDYRSEWLGFTETLAGSGAEARPLGERVVKAFADILDAPG
                     GLLLERDEAGAFITGAAWNWHGRTAVDSEIGAAKRFWDVTAANGRILELDAIRAGWSG
                     DDGAIEIPQSIGDETDAWIGVPLIHKDRAVGLVLLAAPEYRRALDWEDFDLLRTAGRQ
                     AASWLAEAQGQRALSNAQRFEEFNRRFAFILHDIKNLVSQLSLVARNAERHADNAEFR
                     ADMIATLQSSIGKMNDLLARLSPQASPRADRIQPQPLRNILAAAIAARRGTDQVKLLG
                     QCNEWAMVDSGALEQAVGHLLQNAIEASPLGEAVSVRVQRTGSEVTITIADVGCGMDS
                     EFIRSRLFQPFASTKSAGFGIGAFEAQSLVSAMGGRISVESRPGEGTRFTIHLSAADE
                     PPQQLREIA"
     gene            7765..8031
                     /locus_tag="VHN55_09770"
     CDS             7765..8031
                     /locus_tag="VHN55_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804248.1"
                     /translation="MGWMIGRAAIVSDPEGSKRKALEKLQGLPQLDDPESLVVPILID
                     AILLAEAYRGARHQITHLPELTDSVDALLRELTIIEKSAQWAAE"
     gene            complement(8033..>8189)
                     /locus_tag="VHN55_09775"
     CDS             complement(8033..>8189)
                     /locus_tag="VHN55_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003044278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX2804249.1"
                     /translation="GVPKAQWDAAAGNTQKLPSLHSPFWAPDAEAVISTATEAMTVAA
                     LGVLKKG"
BASE COUNT         1383 a         2599 c         2680 g         1527 t
ORIGIN      
        1 tcagtgcggc agcggccggg caggttgcct ggagcagcca gggccgcgga acccagaagc
       61 cttcgacgct ctcgaaggaa tctcccgcga ttccggcaac cagcggatcc tccttggaga
      121 tcgtcggctt tgcccgaacc cgcaatgttc gcttttcgga gtcgtaggac caaccgagcc
      181 aggattgttc gaagtccttc gcaggaccgc ggcacccaaa gcgtatgcgc acttcgaatt
      241 gccgcccgtc gagcgagcca atggcttccg ggacctcggt cccggcagcg gcggcgcttg
      301 ccgcctgggc gacggccgtc agcaagccgg ctcggtcgat cggcggctgc gggcgaggaa
      361 tcacgggggc aggggcagct gcctggtcga cgtcattctg ctctggcgcg tcgtttccct
      421 gctggcacgc ggcggctgcc gccgacagca gcagtacgac cggcagtaag gcggggaatc
      481 gggaggaaat ggccatctgc ggcacctata gcatggaacg gccgttgtgc gaccgtgggc
      541 acgcgggcta gggcgacctt ggaaggagca ggatcgagcg gatgaccttc gatcaagtgc
      601 tgaccctgct tgtgcttgcc gcggtcgtgg ccgctctcat ctgggacaag gtccggtccg
      661 atgtcgttgc gctggccggc gccgctttcc tgctgatgac cggtgtcgtt cggccggtcg
      721 aagtgcaggc tgccttcgcg agcccggcaa tcgtcgcttt ggcttcgttg ttcgtcattg
      781 cctatgcgat ggagctgtcg gggctgctcg acactgcgat cgcgaaggtg gtcgcgttgt
      841 gcaggcgaat tggcgccgcc ggcctgtggg tcctgatcgc gcttgccggc gcactgtccg
      901 cctttctcaa caacacgccg atcgtggtgc ttagcgcccc ggtcgtgcgc gacgtggcgc
      961 ggtcgctcaa ccgttcgccc aaatgctacc tgatcccgtt gtcctacgcc gccgttctcg
     1021 gcggctgctg caccctcatc ggcacgtcga cgaacctgct ggtcaacgac atggccgcgg
     1081 tcgcggggca gccgcgcttc ggaattttcg aaataacgcc ggtcggcctg tgggtggctg
     1141 ccgcgggcgg gctctatctg ctgttgttca gcagcaagct gatccgaacc gaaaacggga
     1201 attccaaggc gagctccgat gaggcggcgg actctgcgga agactttcgc gcgccgggcc
     1261 tcgcgggcgg aatgatcggc catgtccagc cattcaccgc gcatgtcgac ttgaagccgt
     1321 ggcaggcgat catgtcgtcc gcgatcttcg tcgccgttgt cgccgccgct gctctgaaca
     1381 tcgctcccat cgccgcatgc gctttcgctg gcgccgtcct gctcattctc atgcgggtga
     1441 tcacggctga cgaagcctat cacggactga ggccggaagt gctgatgttg atcgctggaa
     1501 tgatcgtcct cgggatcgcc ctcgacgaaa ccgggcttgc cggcgaggcg acgaacgcgc
     1561 tgatcgggtc gatggagaac atgagcccgc tgcttgcgct gatcatcctt tacggggcga
     1621 cactcttcgc gacggaaatc ctgtccaacg ctaccgtggc ggtgctgttt acgccggtgg
     1681 cggtgacgat ggcggaagct ttcgcagtca gcccgcgccc attcctgatc gccatcatga
     1741 tcgctggaag cgcggcattc gcgacgccgt tcggctacca gacgaacgtg attgtctacc
     1801 agatgggcgg gtacaactat atggacttca tgaaagtcgg gctgccgctc aacctcataa
     1861 cttggatcgt cggggtgatc gcgatccaat attattttcc gttttaacct aagacgccga
     1921 gattagcaga gctaatcgag agacgtcgca ggccggccag cgggtcagcg aagcagagcc
     1981 cgactgacgc caggggattt cctcccgtga cggcccgcgc gctgcgcgcg aatgtcggct
     2041 tcggatgtcc ccggacatcc tccaggcgac aatggtgccc aggagaggac tcgaacctcc
     2101 acgcccttgc gagcgccagc acctgaagct ggtgcgtcta ccaattccgc cacctgggca
     2161 cggacatgtc gataagtggt aggcggcgcc atttggaggc ggggtaggtg cttgtcaacc
     2221 gagcccgaaa cgctagggca aaggcatgat caaccccgac aatcgcatcg tgaccgtgtt
     2281 cggcggcggc ggcttcatcg gccgctacgt ttgcgagcaa ttgttcaagg aagatgtgcg
     2341 ggttcgagtc gcctgccgaa gcccgcgaag cgcctatttc ctccagccgc tggcggctgt
     2401 cggccagttc ggcgccgtgc gtgcggatgt cgccgatgca gcttcggtca ggaccgcggt
     2461 gaaaggttcg ttcgcggtga taaacctcgt gggcgtgctc aagggggcgt tccacgcgac
     2521 tcatgtcgag ggagcgaaaa acgtagccga agcggctcgg gacgccggag cggagtcgct
     2581 cgttcatatt tcagcgatcg gcgcagatcc ggaatccgaa tccgcctatg gccgaaccaa
     2641 gggcgaaggg gagcttgccg ttcgtgccgc cttcccgaag gcgacgatca tccggccgtc
     2701 ggtcgtcttc ggcccggaag acgatcttac caaccgcctc gcgggcctct cgcggcttcc
     2761 agtgttgccg gtggtcgccg ccgaacggcg gttccagccc gtgtacgtga aggacctcgc
     2821 caaggcgatc gcccaggccg cgctcgaccc gctcggcttt ggcggaaaca cgttcgaaat
     2881 cggcggtccg caggtgatga cgatggagga tatttacgca atctgcgctc gctcggccgg
     2941 gcgcgagccg gaaatgcccg accttccgaa tttcgcctcc gcatttctgt cgtggttcgg
     3001 tttcctgccc ggcgcaccgc tgacccgcga tcaatggaag atgcttcagc gcgacaacct
     3061 gccggccagg aaagcgaagg gcatggaagc gttcggcatc gagccgacgg cgctggaatc
     3121 ggtcgctccc gaatggctcc aacgctaccg ccagggcggc cgctggtctg cgcccgcggt
     3181 tgagcaagca gcctgagaca gccgcctaga tgccaatcct cctgatcgcg atcatcctcg
     3241 gcatcgtcga gggagtcacc gaattcattc cggtctcctc gaccgggcac ctgatcctcg
     3301 cgaccgagct gctcggcttc aatgccgacc agtggaaggc gttcaacgtc atcatccagc
     3361 tcggcgcgat ccttgcgatc gtggtacttt actggaggac cttctgggcg gtgctcgaag
     3421 ggctgttcgc caaccagccg atgtcgtggc gcttcgtccg caacgtcctg atcggcttcg
     3481 tgccatccgc ggttctcggc ttcctgctca tcaacaatat cgaggcgctg ctcggcaatg
     3541 cggtcgtcgt cgcctgggcg ctgatcctcg gtggggttgc gatcctggtc atcgagaaaa
     3601 cggtgaagcc cggggaaatc gtcggcgtag cggaaatgcc gcttggacgg gtcgtcggga
     3661 tcggcgtcat ccaatgcctg tcgatgatcc ccggggtcag ccgttcgggg gcgacgatcc
     3721 tgggcggcct agccctcggc gtcgagcggc gcacggccgc cgaattcagc ttcttcctag
     3781 ccatcccgac catgcttggg gcgaccgtgc tggagatcgc caagcatcac gagacgctgc
     3841 tggcggacac gaccgaggtc ggcttcggca cggttgccgt cggcttcgtg gtcagcttcg
     3901 ttgttgcgat cgtcgtggtg cgggcattcg tccactatat ctcccgccac gggttcgcgc
     3961 cgttcgcctg gtaccggatc gtcgccggca cggcagcact catttggctg acaatgcgct
     4021 aagcggtcac ctggtactgc ttcagcaggt cgtagagcgt tggccggctg atccccaaaa
     4081 gcttcgctgc cccggagatg ttgttgtcgg tccggctaag cgcctggcgg attgccctgc
     4141 ggtcggcgac ttcgcgtgcc gcgcgcaggt tgatggggaa gtcggctccg ttgaccgccg
     4201 ctcccggcag gtcgaggtcg gcggcgccga ccagcttgcc gtcggccatg atgatcgccc
     4261 gcttgatccg gttctccagc tcccggacgt tgcccggcca gccgtagctg tcgatcgcag
     4321 ccacggcgtc ggcggcgagg ccttgaacgt tgagcttcat ctcgtgggcg aagcggttgg
     4381 tgaaatggcg cgccagaagc actgcgtcgc ccgcccgctc cgctagcgaa ggaattttga
     4441 cgactacttc ggcgaggcga taatagagat cgtcgcggaa acggccgtcg gcgagcatcg
     4501 cctccaggtt ttggtgggtg gcacagacca ccctcgtgtc cacggcgatc ggctgccggc
     4561 cgccgatgcg ctcgatgact cgctcctgga ggaagcggag cagcttgacc tggagtggga
     4621 gcggaatgtc gccgacctcg tcgaggaaca gcgtgccgcc ctgcgccagc tcgatcttgc
     4681 cgacgttcga tttcaccgct ccagtgaagg cgccgcgttc atagccgaac agctccgctt
     4741 ccagcaggtt ttcggggatt gccgcgcaat tgattgcgat gaacgggccg gcggtacggt
     4801 cgcttcgctc gtgaaccgcc cgggcaagca gctccttgcc ggttccgcta gcgccgagca
     4861 gcatcaccga cacattggtc gatgcgactc gctcgatggt tcgagcaacc ttcagcattt
     4921 cgtccgagct cgttacgatc gagcctagta cggtcgatcc cgttgcttcg agccgtcggt
     4981 tctcctcttc gataccatgg aggtggaagg cgcgggcgac gatcagccca agctcgtcaa
     5041 tgtcgatcgg ttttcggtag aagtcatatg ctccaagcgc gatcgccttg atcgcgcttt
     5101 cgcgggcacc gtggccggat gcgacgatga tcttcgtgtc cggcttgatc gccagcattt
     5161 ccctgagcgt cgcgaagcct tcgtcggtgc catcgggatc cggcggaagg ccgaggtcga
     5221 gcgtaacaac ggccggttcg tggagccgaa gcgcctccag cgcagactgg cggtcgccgg
     5281 cagcgacgac cgtatagccg tcatacgccc acttgagctg gcgctgaagc ccttcgtcgt
     5341 cctcgacgac gaggaggacc ggaagactgg gttgggtgct catgcgattt cccgaagctg
     5401 ctggggcggc tcatcggccg cggagaggtg gatggtgaag cgcgtgcctt cgccagggcg
     5461 gctctcgacg ctgatccggc cgcccattgc gcttaccagg gactgcgctt cgaacgcgcc
     5521 aattccgaag ccggcgctct tggtggaagc aaagggctgg aaaagccggc tgcggatgaa
     5581 ttccgagtcc attccgcacc cgacgtcggc aatcgtgatc gtcacctcgc tgccggtacg
     5641 ctggactcgg acgctcacgg cctcgcccag ggggcttgct tcgatcgcgt tttggagcag
     5701 gtgtccgaca gcttgttcga gggctcctga atcgaccatt gcccattcgt tgcactgacc
     5761 cagcaacttg acctggtccg tgccgcgtcg ggctgcgatt gcggcagcga gaatgttgcg
     5821 gaggggttgc ggctggatcc ggtccgcacg cggcgatgcc tgcggcgaaa gccgcgccag
     5881 caggtcgttc atcttgccga tcgagctctg gagcgtcgcg atcatgtcgg cgcggaattc
     5941 ggcattgtcg gcgtgccgtt ccgcgtttcg agcgaccagc gacagctggc tgaccaggtt
     6001 ttttatgtcg tgaaggatga acgcgaagcg gcggttgaat tcctcgaacc gctgcgcgtt
     6061 cgacagcgcc cgctggcctt gggcctcggc cagccagctg gctgcctgcc ggccagcggt
     6121 gcggagaagg tcgaaatctt cccagtcgag cgctcggcgg tattcgggcg ccgcgagcag
     6181 gaccaggccc acggccctgt ccttgtggat caggggaacg cctatccagg catcggtctc
     6241 atcgccgatc gattgcggaa tttcgatggc gccgtcgtcg cccgaccatc ctgcccggat
     6301 tgcgtcgagc tcgaggattc ggccgttggc agcggtcacg tcccagaagc gcttggccgc
     6361 gccgatctcc gaatcgacgg ccgtgcggcc gtgccagttc caagcggctc cagtgatgaa
     6421 tgcgccggct tcgtcacgct cgaggagtaa tcctccgggc gcatcgagga tgtcggcaaa
     6481 ggcctttacg acgcgctccc cgagcggacg agcctcggct cccgatccgg ctagagtctc
     6541 ggtgaatccc agccattcgc tgcgatagtc gtagcggtgc tcgaacagat gcttggcgat
     6601 tttcactttc gcccagcttc gcgcgcgcgg gctcggcacc aggaccatcg ccgcaaccac
     6661 cattaccgcc agaagcccgg ccgacagggc gcgcagccaa ttgccgtcgg ctccgcgaag
     6721 agccgttgcg aggaccgcca tcaccacgaa atatgcgcag atgccgagca gcgacaaaga
     6781 ctggaacgtt gccgcgcgcg acaaccggat ccgccagtca tcttcgttgc gggctgcaag
     6841 gacgaatagt ggaccggtca gcgcgaccgc gacgcctcgc cagtcgccca ggccgccggc
     6901 cgccgacggg gcgagatatt tgatcgtgta gaagttgagg tcgtaggccc agctcagtgc
     6961 aagcgcgagc attgcgaagc ggatgttcga ccggctcgac ggcgctgcct ggccatagag
     7021 attgtggaca agtacgagcg agcccgcggc ggcggtaacg cgaaggatcg tgccggtttg
     7081 gtcgatcgcg gccccggtct ccgctccgcc ggcgcgagca gcgacccaga tcgtggtaac
     7141 gaccagctgg aagccgagca cggccgagac ggcgccatag accagccgaa cccctttctg
     7201 ccggccttcg ctcgatgcgt agaggctgta gaggagcccg acccacacca ggttgcgcgc
     7261 ggtttccgaa taacgcgcca gcgcctcgcc cggaccgatc gcctgaagcc acgcccagca
     7321 tgcggtcaga gcgaatgcgg ctagtagcag ccggtgcccc ggctggcgcg cacccgctcc
     7381 caaccgccaa accagcaacg acgcgaacat tgtcgcggcg agcgcatggc tccaaaagga
     7441 gactagcggc gacacggcgc ctcgagtggc aattccagcg acatgcggac aggtgtcgct
     7501 aaactttaca aataagtggt gaacggaccc cgatggagga acggtaatga tcgaaaatgg
     7561 ccgatccgga tcagcgggct gaccgagctt cgcccagctt gccgagctgg ttgcggcgat
     7621 ggagctttac ctgaccccgc agcagatcgc gaagctcgat tcggcaagct cctgagcggt
     7681 taacgccgag ccgcctcaat cgcgcggcgg acgcgctttc ctgcccggcc acggcggcta
     7741 gtgttgcggt caaggagcgg tggaatgggt tggatgatag gtcgggcggc aatcgtgtcc
     7801 gaccccgagg gttcgaaacg caaggcactg gagaagctgc agggactccc tcaactcgac
     7861 gatcccgaaa gcctggtggt gccgatcctg atcgacgcca ttctcctggc cgaagcctat
     7921 cgcggcgccc gccaccagat cacccatctg cccgagctca cggacagcgt cgacgcgttg
     7981 ctccgcgagc ttacgattat cgaaaagtcg gcccagtggg cggctgagta actcagccct
     8041 tcttcaacac accgagcgcc gccacggtca tcgcctcggt cgccgtcgag atcacggctt
     8101 ccgcgtcggg agcccagaac gggctgtgaa gcgacggcag cttctgggtg ttaccggcgg
     8161 ccgcgtccca ttgcgccttg ggaacgccg
//
LOCUS       DATAKH010000230        17229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_30079,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000230 DATAKH010000000
VERSION     DATAKH010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 17229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17229
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30079"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(208..936)
                     /locus_tag="VHN55_09780"
     CDS             complement(208..936)
                     /locus_tag="VHN55_09780"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEX2804250.1"
                     /translation="MRTSWHSATGPRPQLPAYLRQSKRLKGLDEWQDPPWKQRTRRLS
                     GRAKAGLILVGAVALGIGAGAVLSWREAPPAAPKVFAPDAVALDPRALAPPPEEADGE
                     WAARGEMELAPPAAAPSGSSDRIGAVRASFSYCKWGGGTNCVVDGDTFFIGGAKVRIA
                     GIDAPETHDYRCKSELALGDRATAQLQALLNSGAVTMTSIDRDRDRYGRLLRNVAVNG
                     QDVGEALISASVARAYAGGRRSWC"
     gene            complement(984..1271)
                     /locus_tag="VHN55_09785"
     CDS             complement(984..1271)
                     /locus_tag="VHN55_09785"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX2804251.1"
                     /translation="MSKKWLPWWVHRQLERKRRRDAVRERDGDNCWRCGHPMRFGPPY
                     NRGKAATIEHVMPLASGGTSALSNLRLCHVGCNRHLGAHDPAQKERMRLVR"
     gene            1390..1626
                     /locus_tag="VHN55_09790"
     CDS             1390..1626
                     /locus_tag="VHN55_09790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804252.1"
                     /translation="MRLRDPRSVHIDGALPLTDGSQNMDLNYLYHRHQVSVFNAENAT
                     CQQARLAHLNLVAGYAKKIAAAKARISAQLSLVA"
     gene            1623..1799
                     /locus_tag="VHN55_09795"
     CDS             1623..1799
                     /locus_tag="VHN55_09795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804253.1"
                     /translation="MKPPISREDAADELREQAASCRRLAWRARTVAGVDALKNVAKMF
                     ESDAKRIDPRSAGR"
     gene            1796..2020
                     /locus_tag="VHN55_09800"
     CDS             1796..2020
                     /locus_tag="VHN55_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003041875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804254.1"
                     /translation="MSRVLFLSLDEGDVVSRCLAADVGISAIEYLPAGGVRLVCMSVD
                     GAEAMRKKLKSKLIAGRVTRELYRPGMPPL"
     gene            complement(2054..2290)
                     /locus_tag="VHN55_09805"
     CDS             complement(2054..2290)
                     /locus_tag="VHN55_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804255.1"
                     /translation="MDLAAAQRIPTGTPISRVIAKFGPPDGSHFDANGFQFLRWTQTR
                     GSSAHSSRINGVVLRFDTNGRYAGVESYTLERVN"
     gene            complement(2432..2788)
                     /locus_tag="VHN55_09810"
     CDS             complement(2432..2788)
                     /locus_tag="VHN55_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007164080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2200 domain-containing protein"
                     /protein_id="HEX2804256.1"
                     /translation="MSNWERVYKMAFASVYPQYLRKTEAKGRAKAELDEIIRWLTGYS
                     QEQLEAEIDKGTDMRRFFEDAPRPNPARSLITGTICGDRVQDIAEPLKREIRYLDKLV
                     DELAKGRPMEKILRAQ"
     gene            3127..3453
                     /locus_tag="VHN55_09815"
     CDS             3127..3453
                     /locus_tag="VHN55_09815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006952109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HEX2804257.1"
                     /translation="MPDTAAARARLEAQLAELEARLANIAGDLAEPINPDSSEAAVEM
                     EDDAALEGQGALVEREIASVKRALARIEDGTYGECVRCGGAIAPARLEARPEAALCID
                     CARAAE"
     gene            complement(3513..3683)
                     /locus_tag="VHN55_09820"
     CDS             complement(3513..3683)
                     /locus_tag="VHN55_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804258.1"
                     /translation="MGEREKIEPHEGDVRYQRRNEDGQFGESDDQADSLRQDIQQHAE
                     HKKPRNEGDKGD"
     gene            3782..4333
                     /locus_tag="VHN55_09825"
     CDS             3782..4333
                     /locus_tag="VHN55_09825"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX2804259.1"
                     /translation="MTLRLDAPPESAEGAAGLKGDGHMITQLRALLLALAGALALCGC
                     GRGADTGAVADQVRKDALGLVAAYNAEDAKAAAAYDAPDYVGIYHGQPNTVGPAADEA
                     GMKAQMEAADVDWKLGPDKVTVATAGDFAVFEAPYTFTVTTPQGGRSVETGSWVAIFR
                     RQGDGSLKLWRSIASDTPPPPGG"
     gene            complement(4357..5184)
                     /locus_tag="VHN55_09830"
     CDS             complement(4357..5184)
                     /locus_tag="VHN55_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804260.1"
                     /translation="MPYRHAPYYVLACIAVIVAGFWESYFSVWGNVPWQFHAHGIAAS
                     IWVLMVLAQSWTPHHKQLPLHRAVGKSSLILFPFLIGGLAAIIDLTGKGFVGGNDPVR
                     AMFGGEFLVGLALAAAAYVVLYYRALKYRRKVWVHSGYMLATPLILFESPLSRILGAW
                     VPGLTVAGPQDFGRIIPSIEWAMATELVVIAAIWLAYREKAKPFLVAGGFVVAQMVTM
                     GFMSHNAVLEAALVVIGNVPSAAVVMTGMAIGAVTSWAGWQAGKRPVAPAVAAAQPA"
     gene            complement(5248..5460)
                     /locus_tag="VHN55_09835"
     CDS             complement(5248..5460)
                     /locus_tag="VHN55_09835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804261.1"
                     /translation="MSKIRKAAKPTVELRPSRIRRDPVPVAEAAGEKKLRWESDERDI
                     WIALIGIVAFALAIDIIIVAISTYWN"
     gene            complement(5554..5865)
                     /locus_tag="VHN55_09840"
     CDS             complement(5554..5865)
                     /locus_tag="VHN55_09840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804262.1"
                     /translation="MDKPDVATPAERWTRIDDYLGGVRRRLRSSRQRQRQRTEPEAPR
                     AMLSTIPFAALIGVLAMLMVAIAVTAWPPSQPEFPLRTAERELGTAPPGWFEKAKKEF
                     R"
     gene            6032..7981
                     /gene="ftsH"
                     /locus_tag="VHN55_09845"
     CDS             6032..7981
                     /gene="ftsH"
                     /locus_tag="VHN55_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020817846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEX2804263.1"
                     /translation="MNEKKPANPWVKSLLIWVGILFGLVLFVQMLGGGSTAAAGQPIA
                     YSEFVRQVNEGNVRSVTMATSANRNSVITGKLADGSDFRTTAPGDASVSAQLIERGVD
                     VQVKAEEGSSIWLLMLYNSLPLLLFIGLGFFVMRQMQKNAGSGAMGFGKSRARMLTEK
                     HGKVTFADVAGIDEAREELEEIVEYLKDPGKFARLGGKIPKGALLVGSPGTGKTLLAR
                     AIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKSAPCILFIDEIDAVGRHRG
                     AGLGNGNDEREQTLNQLLVEMDGFEANEGIIIIAATNRPDVLDPALLRPGRFDRQVVV
                     PRPDIDGREKILGVHMKKVPLAPDVDPRVIARGTPGFSGADLANLVNEAALLAARKGK
                     RLVAAQEFEEAKDKVMMGTERRSMVMTEDEKRMTAYHEAGHAIVALHEEASDPIHKAT
                     IIPRGRALGMVMRLPERDNYSYHRDKMYANLAVAMGGRVAEELIFGYNKVSSGASSDI
                     QYATGLARDMVTRWGLSDKLGPLQYAEPDEEVFLGYSVNRTRQMSDETARAIDGEIRR
                     IVEEAYEKAKTCLNDNRDQLETLAQALLEFETLTGDEIRTLMDGGAIDRGGPTGAAIP
                     AAGSSIPKAGRKKPRPLGGPATAGA"
     gene            complement(8010..10553)
                     /locus_tag="VHN55_09850"
     CDS             complement(8010..10553)
                     /locus_tag="VHN55_09850"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX2804264.1"
                     /translation="MAIKLWTTTPTSNSDFIIAGGGNSTVDGGNGNDLILGDSVTPLT
                     YGTTTNGDAPVSINNAAYWTTDENPFFEDASIPHTSLFVQAEGGSSQYAKVTVGAGET
                     LTIDIDFGYDFSIGSYSDLIVTLIDSTGAVVAINDYANDFGVGGAGSVYGNDPFLTYT
                     NWSGPTQAFTIRFSESWNGMSVPFDGGETFVANISVTGHVVTTPTAMGDDMLSGGFGD
                     DILAGMGGNDSLYGNVGYDTLIGGTGNDLLDGGDYTDTASYEDASGPVTVDLSVIGAQ
                     DTVNAGMDTLVSIERLIGSRFSDTLSGDANANSLWGRRGNDTISGGGASDYLYGEDGE
                     DTLSGGDGNDYLYGDRNDYRTSFANILYGDAGDDYLYGGFGNDTLNGGVGNDIISDPG
                     GNDWIAGGSGIDELQFWSTAFGGVTVDLRVTVAQDTVGAGIDLITSIENLTGSYSNDV
                     LVGNDSANRIRGVYGNDYISGAGGDDVLAGEYGDDNINGGSGLDTVTYIYAFSGVTVD
                     LAISAPQDTIGDGIDTLKLIENLTGSYYDDNLSGTGAANTIEGETGNDMLWGRGGNDI
                     LRGGSDDDILNGGTGDDRLVGGDGFDMASYAGSGSAVTVTLASVAAQNTIGAGTDTIS
                     GVEGIIGSSYADTLTGNGSANRLDGGAGADTMTGGGGNDVYIVDNVGDVIVESGGGGT
                     DTVFSSVHYSLGSDVEKLTLSGASNLNGFGNGLNNVITGNSGDNILGGGLGNDTLTGG
                     DGKDRFRFDTALNSATNVDTITDFSVVDDTFQLDDDAFVGIGALGTLNANAFVIGSSA
                     ADGGDRIIYDSATGDLYFDADGTGAGAQILFAHIGPGLGLTNADFIIIA"
     gene            complement(10937..11977)
                     /locus_tag="VHN55_09855"
     CDS             complement(10937..11977)
                     /locus_tag="VHN55_09855"
                     /inference="COORDINATES: protein motif:HMM:NF023828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3667 domain-containing protein"
                     /protein_id="HEX2804265.1"
                     /translation="MPDREALDSGTSGVAEQPTEQSRDDGHTHETRCLNCGADLTGPY
                     CAMCGQHAHVHRTLGAWWHDFLHSVLHIDGKFWRTVQMLVIRPGELTRRYVHGERAKF
                     VSPLALFLFSVFAMFAIFTITGSSFEADAGPVKQGLQEELRDLDRQIANSEQERAAAE
                     ARGADTGAIDRRIDNLRQEAELFRTVRDQGLARGSAVRISDDVPAWLKPVAQKAAANP
                     ELLLYKMQANAYKFSWALIPISVPFVWILFLHRRRYRRELTSYDHLVFVTYSLSFATL
                     LIVSSMLLGRLYEPLAPLVMLAMPVHIYRQLRGAYAVGRFAALWRTAALLLFATLAIA
                     FFVVMLAALGAF"
     gene            12039..12668
                     /locus_tag="VHN55_09860"
     CDS             12039..12668
                     /locus_tag="VHN55_09860"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010542808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEX2804266.1"
                     /translation="MKRIGLLGGSFNPAHEGHRQLSLAAIDALALDEIWWLVSPGNPL
                     KDSAPDMAPYEARMESARKIAAGKAIRASDFERRAGTRYTVDTLRALLREHPDDRFIW
                     LMGADTVAEFHRWKDWRTIAQLVPIAVLPRPGYDEAARAARAMGWLSGSVRPESQAKC
                     WTEWSPPAILFLRLPTNPTSATALRALDPNWHRRKRPGTSRSRAGGTPT"
     gene            12678..13079
                     /gene="rsfS"
                     /locus_tag="VHN55_09865"
     CDS             12678..13079
                     /gene="rsfS"
                     /locus_tag="VHN55_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019830981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEX2804267.1"
                     /translation="MPNPPAETAVNGRPSAEVDKLHKLVLKSLDDDQALEITSIPLEG
                     KSSIADHMVIASGRSTRQVAAMATKLAERIKQEFGRSVRIEGLPAADWVLIDADDVIV
                     HLFRPEVRSFYNLERMWAFGDEKMSATAQGG"
     gene            13083..13934
                     /locus_tag="VHN55_09870"
     CDS             13083..13934
                     /locus_tag="VHN55_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010164424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX2804268.1"
                     /translation="MRRLTAFLFCLMAFAAAPAAAAQHPRVASLQNELSALVTTKSAD
                     VGIAAIDLTTGEMVSVRGSQRYPLASTIKVAVAATYLSYVEKGDRSLDDTISGSSAAS
                     LMRRMLVHSDNHATDLLIRNLGGPKTVQKWLDWHHVEGIRIDRTIAQLLRDKRDLYDH
                     RDSGTPVAFAKFLARLDAGYLINDKSKAYLLDLMAQCMTGRNRMKSMLPSGTRVEHKT
                     GTLNGLSDDVGFITLPSGHRVAVAIFARGGSNRPRAIAEAAKAVYDGFLATVRWPYTA
                     ASAISGR"
     gene            13936..14358
                     /locus_tag="VHN55_09875"
     CDS             13936..14358
                     /locus_tag="VHN55_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006962282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEX2804269.1"
                     /translation="MLLHIVARGKIGRSPEADLVERYLKRISWPTKLTELADDGRPAP
                     PLPANGVLVALDERGKALSSTELAQALDSWRDCGKREARFSIGGADGHSGADRSAADM
                     LLSFGPATWPHLLVRAMLAEQLYRATSILANHPYHREG"
     gene            14363..15541
                     /locus_tag="VHN55_09880"
     CDS             14363..15541
                     /locus_tag="VHN55_09880"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX2804270.1"
                     /translation="MFRLASTVLLAAGSAAIAASAPVRPEQLPLDLQLQQARSEANAA
                     VAEQRRLEKAAAEARDEVTRLRARQLAAAQAIAAAEARISAADARARLAAAQVAAQRQ
                     RLAQEQAPASALLGGLALTARRPPLLLLADSGSADEIVKLRILVAATAPAIRAKTAAL
                     SREFDNARRLEKAAIAARDSLQRSRGELHRRRAEFAALEQRALQVARRRGSQALGAGD
                     LALVRQERLAIAEQGTSSKQASASLARELAELGPAPVAATGSPQAAPLRYRLPANALV
                     SDGLGGISANGVRSRGMTLATQRGTTLAAPASGTILFAGPFRDYDGVVIIDHGGGWKS
                     VLVNAGSKLPKGAAVRMGDPFAIAFGPVEVQLQRNGEAVSPALIAGSSAKVSNPRKGG
                     "
     gene            15576..16925
                     /locus_tag="VHN55_09885"
     CDS             15576..16925
                     /locus_tag="VHN55_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017980268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX2804271.1"
                     /translation="MKTIHKILPPLALVGALALVPVTTSSLAAQDAANYKELEKFMSV
                     YERVKANYVEPVDDHTLIKGAIDGMLAALDPHSSYLQDSDFDTLRSTTDGNYGGLGLT
                     VSIEDGAVKVIAPTEDTPAWRAGIKAGDYITHINGDLVYGESLDEAVDKMRGAPGTSV
                     KLKIVRPGRDKPFDVSIVRERINLRPVKWEVKDGIAIIDINTFSGNAAEETRAALSAV
                     DKATGGKPLGYILDLRSNPGGLLDQAVDISDAFLSRGEIVSQRGREKGDIERYYAKPG
                     DMAHGLPVIVLVDVGTASAAEIVAGALQDQRRALVMGEKSFGKGSVQTVVQTGPRSAL
                     RLTTARYYTPSGRSVQAGGIDPDIAVPQLSDPDYENRPAIREADLRRHLLAQVKADDK
                     LLQHDDTSQDPRFSVTAEELEKKGIKDFQLHYALNTLKRLGSRTAVASAGGKSGSRR"
     gene            16971..>17229
                     /locus_tag="VHN55_09890"
     CDS             16971..>17229
                     /locus_tag="VHN55_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEX2804272.1"
                     /translation="MVSTRAQRGRLLALLLPLALLGGALGSQYFGGLYPCEMCYWQRY
                     PHGAAILLALVALFSPADSRRSRTLTLIAALAIAVSGAIGVY"
BASE COUNT         3118 a         5709 c         5427 g         2975 t
ORIGIN      
        1 gaatggttcg ttgtccgcca gagcatgggt cgcccaagca ggcgtcgggt agaaatccgg
       61 cccactgagg tccgcaaatc gcttcgtggt cggcttgaag ccaccgttga cgtgataggt
      121 cgcatccatg gcaaaagtgt accagaatca actacttacg caacagcccg taagtgattc
      181 aaaagactca acaattgggt gaagacctca gcaccagctc ctccttccac ccgcataagc
      241 ccgagccaca ctcgccgaga tcaacgcctc gccgacatct tgcccgttga ccgccacgtt
      301 ccgcagcagc cgcccgtatc ggtcgcggtc gcggtcgatg ctggtcatcg tcaccgcgcc
      361 cgaattgagc agcgcctgca gctgcgctgt ggcgcggtcg ccgagcgcca gctccgattt
      421 gcatcggtaa tcgtgggttt cgggcgcgtc gatcccggcg atccgcacct tcgctccgcc
      481 gatgaagaag gtgtcgccgt ccaccacgca attcgtcccc ccgccccatt tgcaatagga
      541 gaaggaggcc cgaaccgcgc caatgcgatc gctcgaaccg gacggcgctg cagcgggagg
      601 agcaagctcc atctcccccc gcgccgccca ttccccgtcc gcctcctcgg gcggtggcgc
      661 cagcgcccgc ggatcgagcg caaccgcgtc gggcgcgaaa accttggggg cggcgggagg
      721 cgcctctcgc caactcagca cagcgcccgc gccgatccca agcgccaccg cgccgaccag
      781 gatcagcccg gccttcgccc tgccggacaa tcgtctcgtc cgttgcttcc acggcgggtc
      841 ctgccattcg tccaggccct tcagccgttt cgattgccga agataggcag gcagctgcgg
      901 gcgggggcca gtggcggaat gccagctggt ccgcaccggc cggatgcggg tgaccttcct
      961 tttaggcggt ttccatggcc tgctcatcgc acgagccgca tccgctcttt ctgggcggga
     1021 tcgtgggcgc cgaggtggcg attgcagccg acgtggcaca ggcggagatt ggacagcgcc
     1081 gaggtgccgc cgctcgccaa cggcatgacg tgctcgatgg tggccgcctt tccgcgattg
     1141 tacggcggcc cgaagcgcat cgggtgtccg caacgccagc aattgtcgcc atcccgctcg
     1201 cgcaccgcat cgcggcgccg cttgcgctcg agttgccggt gaacccacca cggaagccac
     1261 ttcttgctca tcgcccgccg cgcttacggc aggcacggtt agcgccgggt tagcgccacg
     1321 cgacgggatt aggcgcccag gcgccgctgt gttataaccc cttcatcgca cggaaatttt
     1381 cgtaagcctg tgcggctgag agatcccagg tcggttcaca tcgacggcgc gctcccgctt
     1441 accgacggga gccagaacat ggacctcaat tacctctacc accgccatca ggtgtccgtg
     1501 ttcaatgcgg agaacgcgac gtgccagcag gcgcggctcg cgcacctcaa tctcgtcgcc
     1561 ggctatgcga agaagatcgc ggccgcaaaa gcgcgcatat ccgcccagct gagtctcgtc
     1621 gcgtgaagcc gcccatttcc cgcgaggacg cggccgacga gcttcgcgag caggccgcct
     1681 cgtgccgccg cctcgcgtgg agggcgcgca ccgtcgccgg cgtggacgcg ctgaaaaacg
     1741 tggccaaaat gttcgaaagc gacgccaaac ggatcgatcc gcggagcgcc gggcgatgag
     1801 ccgtgtcctg tttctgtcgc tcgacgaagg cgacgtggtg tcacgttgcc tcgccgccga
     1861 tgtcggcatt tccgcgattg aatatctgcc cgccggcggc gttcgtctcg tctgcatgag
     1921 cgtggacggc gcagaggcga tgcgcaagaa gctcaagtcg aagctgatcg cggggcgggt
     1981 cacccgcgag ctttaccgcc ccggaatgcc cccgctctag gtcctccgat cacggcgaaa
     2041 atgcacggcg cccttaattg acgcgctcca gcgtgtaact ttccacgcct gcatagcggc
     2101 cgttggtatc gaaccgcagc acgacaccgt tgatcctgct cgaatgcgcg ctcgaacctc
     2161 tggtttgagt ccacctcaag aattggaagc catttgcgtc gaagtggcta ccgtccggcg
     2221 gcccgaattt agcgatgacc cgggatattg gcgttccggt cggaattctc tgcgctgcag
     2281 ccaggtccat ttcggcgccc agcgaaacac agccggcgag tgcgaatgcg gcaaggcaga
     2341 ccccgattct cacgatgccc tcctccccga ttggtgaacg gcgctgcttg taacataatt
     2401 tatcaccaac gccccggcgc gcgctcgccc gtcactgcgc ccgcaggatc ttctccatcg
     2461 gcctgccctt ggccagctcg tcgacgagct tgtcgaggta gcggatctcg cgcttcagcg
     2521 gctcggcgat gtcctgcacc ctgtcgccgc agatcgtgcc ggtgatgagt gaccgcgccg
     2581 ggttgggccg cggcgcgtcc tcgaaaaagc gccgcatgtc ggtacccttg tcgatctccg
     2641 cctccagctg ctcctgcgaa tagccggtca gccagcggat gatctcgtcc agctccgcct
     2701 tcgcccgccc tttcgcctcc gtcttgcgga gatattgcgg atacacggac gcgaaggcca
     2761 ttttgtagac gcgttcccag ttgctcatat gtcgcttcta tcgccatttt cgcgtcggca
     2821 gaaccgctgg caccaaggct tccgcccgcc cgcataagcc cgcgacagtt ccgcccagat
     2881 ttgcttccaa tgtaggattt cgtctgcttc gctcggacgc ggctctttca gatcgtcaat
     2941 gtcccccatc cagaacgcgc accacgcccg taacgtcacg aaaatggtcg ctcatcgcgt
     3001 gactttagtg aacgtaagcg cgttaccgct gccgatttag ctggcgttgg cctatccgta
     3061 atttcccggc tttgccgcgc gggcgcagcc tcgctaggct tggcccgaaa cgacagggag
     3121 tcagtcatgc ccgacaccgc cgccgccagg gctcgcctcg aggcgcagct cgccgagctc
     3181 gaggcgcgcc ttgccaatat cgccggtgac cttgccgagc cgatcaatcc cgattcctcg
     3241 gaagcggcgg tggagatgga ggacgatgcg gcgctcgagg gccagggcgc gctcgtcgag
     3301 cgggagatcg cctcggtcaa gcgggcgctg gcgcggatcg aggacggcac ctacggcgaa
     3361 tgcgtgcgct gcggcggcgc cattgctccg gcccggctcg aggcccggcc ggaagccgcg
     3421 ctgtgcatcg attgcgcccg ggccgcggaa taagcgaaaa gccctgtccc gcagccgtcg
     3481 ctggtcaggc tcccaaactg gagctgccgc gcctagtcgc ccttgtcgcc ttcgttgcgg
     3541 ggcttcttgt gctcggcgtg ctgctggatg tcctggcgca gcgagtccgc ctgatcgtcg
     3601 ctctcgccga actgtccgtc ctcgttgcgc cgctggtagc ggacatcgcc ttcatgcggc
     3661 tcgatttttt cgcgttcgcc catcgtcgat tcctttcggt ttgcggatgc ccggccaacg
     3721 atcggcccgg acggcccgtt ccttgggcga tcgcggcgca tcctcgcttc gccggtccca
     3781 cttgacgctc cgtcttgacg ctccgcccga gagcgctgag ggtgccgccg ggctgaaggg
     3841 ggacgggcac atgatcacgc aactgcgggc gcttctgctc gcactggccg gcgcgctggc
     3901 gctctgcggc tgcggccggg gggccgacac cggcgccgtc gccgaccagg tccgcaagga
     3961 cgcgctcggc ctggtcgccg cctacaatgc ggaggacgcg aaggccgcgg ccgcctatga
     4021 cgcgccggac tatgtcggaa tctatcacgg ccagcccaac acggtcggcc ccgccgccga
     4081 cgaagcgggg atgaaggcgc agatggaggc ggcggacgtc gactggaagc tcggccccga
     4141 caaggtgacc gtcgctactg cgggcgattt cgcggtgttc gaggcgccct acaccttcac
     4201 cgtcaccacg ccgcagggcg gccgctccgt cgagaccgga agctgggtgg cgatcttcag
     4261 gcgccagggc gacggaagcc tgaagctgtg gcgatcgatc gccagcgaca ccccgccgcc
     4321 gccgggcggc tgacggttgt cacaaaaagg cggggctcag gccggctgcg cggctgcgac
     4381 cgccggagcg acggggcgct tgcccgcctg ccagccggcc cagctcgtca ccgcaccgat
     4441 cgccattccg gtcatcacca ccgccgcgct cggcacattg ccgatcacga cgagcgccgc
     4501 ttcgagcacg gcattgtggc tcatgaagcc catcgtcacc atttgcgcga cgacgaaacc
     4561 gccggcgacc aggaacggct tcgccttttc gcggtaggca agccagatcg cggcgatcac
     4621 cacgagctcg gtcgccatcg cccattcgat cgacgggatg atccggccga aatcctgcgg
     4681 tccggcgacg gtgaggcccg gcacccaggc gccgaggatc cggctgagcg gcgattcgaa
     4741 caggatcagc ggagtcgcca gcatgtagcc cgaatggacc caaaccttcc ggcggtattt
     4801 gagcgctcgg taatagagca cgacgtatgc cgcggcggcc aaggcaagac cgaccaggaa
     4861 ctcaccgccg aacatcgccc ggaccgggtc attgccgccg acgaaaccct tgccggtaag
     4921 gtcgatgatt gccgccaggc cgccgatcag gaagggaaac agaatcaggc tcgacttgcc
     4981 caccgcgcga tgtagcggga gctgtttgtg gtgcggggtc cagctttgcg cgaggaccat
     5041 cagcacccag atgctggcgg cgatcccgtg ggcatggaac tgccagggga cattgcccca
     5101 gacggaaaaa tagctttccc aaaaaccggc gacgataacg gcgatgcagg cgagcacgta
     5161 ataaggcgcg tggcgatacg gcatggagcc ccctccgttg ctcggcgggc atagcacggt
     5221 tggagcgccg acgcgaaggc cgccggctca gttccagtag gtgcttatcg ctacgatgat
     5281 gatgtcgatg gcaagcgcga aggcgacgat cccgatgagc gcgatccaga tgtcgcgctc
     5341 gtcggattcc cagcgcagct tcttctcgcc ggccgcctcg gcgacgggca cgggatcgcg
     5401 ccggatccgc gacgggcgca gctcgacggt cggcttggca gctttgcgga tcttgctcac
     5461 cggcgcgccg tacaacgcag acggttatcg cccggttaag cgccttagga cctgatcggg
     5521 caaaaacagg atgtccgcag ggttggcggc gctctagcgg aattcctttt tcgccttttc
     5581 gaaccagccc ggcggcgcgg tccccagctc cctttccgcc gttcgcagcg gaaattcggg
     5641 ttgcgacggc ggccaggcgg taacggcgat ggcaaccatc agcattgcca gcaccccgat
     5701 cagcgccgcg aagggaattg tgctcagcat tgcgcgcggc gcttccggct cggtgcgttg
     5761 acgctggcgc tgccggctgg agcggagccg tcggcgaacc ccgccgagat agtcgtcgat
     5821 ccgggtccac cgctcggcgg gggttgcgac gtcgggcttg tccatggctg gcgggcactc
     5881 tgcgcccgcc cccgccaccg cgcaacggga tttgtcgcgc ccggggcggc gttcaccgct
     5941 ttgcaagtcg cgcattgtta ttgcccatct tgcccctatc ttgtctccac gggcgttttg
     6001 cccttgcgag aaggccggaa aagagacgcg aatgaacgag aagaagcccg ccaacccctg
     6061 ggtgaagagc ttgctgatct gggtcggcat cctgttcgga ctcgtgctct tcgttcagat
     6121 gcttggaggc gggtcgaccg ccgctgccgg ccagccgatc gcttattccg agttcgtccg
     6181 ccaggtgaac gaaggcaatg tccgctcggt cacgatggcg acctccgcca accgcaacag
     6241 cgtgatcacc ggcaagctcg ccgacggaag cgacttcagg accacagcgc cgggcgatgc
     6301 ctcggtttcc gcgcaactga tcgagcgcgg ggtcgacgtc caggtgaagg ccgaggaagg
     6361 ctcgagcatc tggctgctga tgctctacaa ttcgctgccc ttgctcctct tcatcggcct
     6421 gggcttcttc gtcatgcggc aaatgcagaa gaatgccggc tccggagcca tgggcttcgg
     6481 caaaagccgg gcgcgaatgc tgacggaaaa gcacggcaag gtcaccttcg ccgacgtcgc
     6541 ggggatcgac gaggctcgcg aagagctcga ggagatcgtc gaatatctga aggacccggg
     6601 caagttcgcc cggctcggcg gcaagattcc gaagggtgcg ctgctcgtcg ggtcgcccgg
     6661 caccggcaag acgcttctcg cacgcgccat cgccggcgag gcgggcgtgc ccttcttcac
     6721 catctcgggc tccgacttcg tcgagatgtt cgtcggagtc ggcgcgagcc gcgtccgcga
     6781 catgttcgac caggccaaga agagcgctcc gtgcatcctg ttcatcgacg agatcgacgc
     6841 agtcggccgc catcgtggcg ccggtctggg caacggcaac gacgagcgcg agcagaccct
     6901 caatcagctg ctggtcgaga tggacggttt cgaagccaat gaaggcatca tcatcatcgc
     6961 agcgaccaac cgtcccgacg tgctcgaccc ggcacttctg cgtccgggcc gattcgaccg
     7021 ccaggtggtc gtcccccgcc ccgacatcga cggccgcgag aaaatcctcg gcgttcacat
     7081 gaagaaggtg ccgctggcgc ccgacgtgga cccgcgcgtc atcgctcgcg gaacgccggg
     7141 cttctccggc gccgaccttg ccaacctcgt caacgaggcc gcgctcctcg ccgcccgcaa
     7201 gggcaagcgc ctggtagcgg cccaggagtt cgaggaggcc aaggacaagg tgatgatggg
     7261 caccgagcgc aggtccatgg tcatgaccga ggacgaaaag cgaatgaccg cctatcatga
     7321 ggccggccac gcgatcgtcg cactccacga agaagcctcc gacccgatcc acaaggcgac
     7381 gatcattccg cgcggccgcg cgctgggcat ggtgatgcgg ctgccggagc gggacaatta
     7441 ctcctatcac cgcgacaaga tgtacgcgaa cctcgccgtc gccatgggcg gccgagtcgc
     7501 cgaggaattg atcttcggct acaacaaggt gtcgtccggt gcttcttccg acatccaata
     7561 tgcgaccggg ctggcgcgcg acatggtcac gcggtggggc ctgtcggaca agctcggccc
     7621 gcttcaatat gccgagccgg acgaggaggt cttcctaggc tattccgtca accgcactcg
     7681 ccagatgtcg gacgagacgg cccgcgcgat cgatggcgaa atccggcgaa tcgtcgagga
     7741 agcctatgaa aaggcgaaga cctgcctgaa cgacaaccgc gaccagctcg aaacgctggc
     7801 ccaggcgctg ctcgagttcg agaccctgac cggagacgag atcaggacgc tgatggacgg
     7861 cggcgcgatc gaccgcggcg gcccgaccgg agcagcgatt ccggccgccg gttcttccat
     7921 cccgaaggcc ggccgcaaga agccgcgccc gctcggtggc ccggcgaccg cgggagccta
     7981 aaagctcccg cgatatcagt ccgacttcgc tacgcgataa tgatgaaatc ggcgttggta
     8041 agccccaggc ccgggccaat gtgcgcgaag agaatttgcg cgccggcccc tgttccgtcg
     8101 gcgtcaaaat agagatcgcc ggtggctgaa tcgtagatga tccgatcgcc cccgtcggcg
     8161 gccgagcttc cgatgacgaa cgcgttcgcg ttcaacgttc ccagcgcccc gatcccaacg
     8221 aaggcgtcgt cgtccagctg gaaggtgtcg tcgacgacgc tgaagtcggt aatcgtgtcg
     8281 acgttcgtcg cggaattcag cgcagtgtcg aagcggaagc gatccttccc gtcgccgccg
     8341 gtcaatgtat cgttacccag gccgccaccg agaatgttgt cgccactgtt gcccgtgatg
     8401 acgttgttca ggccattccc gaacccgttc aaattggacg ccccggacag ggtgagcttt
     8461 tcgacatcgg atccaaggct gtagtggacg gagctgaaga ccgtgtcggt gccgccgccc
     8521 ccgctttcaa cgatcacgtc cccgacattg tcgacgatgt agacatcgtt gccgccgcct
     8581 cccgtcattg tgtcggcgcc ggccccgccg tcgaggcgat tggcggagcc gttgccggtc
     8641 agcgtatcgg cataggagga gccgatgatc ccctctacgc cgctgatcgt gtcggttccc
     8701 gcaccaatgg tattctgcgc cgccaccgat gccagggtaa ccgttaccgc ggatccggat
     8761 ccggcgtagc tggccatgtc gaagccgtcg ccgccgacca gccgatcatc cccggtaccg
     8821 ccgttcaaaa tgtcgtcgtc ggatccgccg cgcaatatgt cgtttccgcc gcggccccac
     8881 agcatatcgt tgccggtttc gccctcgatc gtgttcgccg cccccgttcc cgacaaattg
     8941 tcgtcgtaat aggaccccgt cagattctcg ataagcttca gcgtgtcgat gccgtcgccg
     9001 atagtgtcct ggggtgccga aatcgcgagg tccaccgtga ctccggaaaa ggcatatatg
     9061 taggtgacgg tatccaggcc cgaaccgccg ttgatgttgt cgtcgccata ttcgcccgca
     9121 agaacgtcgt caccgcccgc gccgctgata tagtcattgc cataaacgcc gcgaatccgg
     9181 ttggccgagt cgttccccac caacacgtcg ttcgaatagc ttcctgtgag attttcgatg
     9241 ctagtgatca aatcgatccc ggcaccaacg gtgtcctgcg cgaccgtgac ccgcaggtcg
     9301 accgtgactc caccgaaagc cgtgctccag aattgcagct cgtcgatgcc cgaaccacca
     9361 gcaatccagt cgttgccgcc gggatcggaa atgatgtcgt tgccaacgcc tccgttgagt
     9421 gtgtcgttac cgaacccgcc gtagagatag tcgtcccccg cgtcgccgta gaggatgttt
     9481 gcaaaggacg tcctgtaatc gttgcgatcg ccgtagagat aatcgttgcc gtcgccaccg
     9541 ctgagggtgt cctcgccatc ctcgccgtac aaatagtcag aggcgccgcc tccggaaatc
     9601 gtgtcattgc cgcggcggcc ccaaagcgaa tttgcgttgg catcgccgga cagggtatcc
     9661 gaaaaccgcg aaccaatgag ccgttcgatc gatacgagcg tgtccatccc cgcgttgacc
     9721 gtatcttgtg ctccaatcac cgagaggtcg acggtcactg gcccggaagc atcttcgtac
     9781 gacgccgtgt cggtgtaatc gccgccatcc agcaggtcgt ttccggtccc gccgatcagc
     9841 gtgtcatagc ctacgttgcc gtacaggctg tcgttaccgc ccattccggc aagaatgtca
     9901 tcgccgaagc caccgctgag catgtcgtca cccatggcgg tcggagtggt gacgacatgg
     9961 ccggtgaccg aaatattcgc gacgaacgtc tcgccgccgt cgaacggcac ggacatgccg
    10021 ttccagcttt cggaaaagcg gatggtgaaa gcctgtgtgg ggccgctcca attcgtgtag
    10081 gtcaggaacg gatcattgcc gtacacgctg cccgcgccgc cgaccccgaa atcatttgcg
    10141 taatcgttta tcgccaccac cgcaccggtc gaatcgatca gggtgacgat cagatcgcta
    10201 taacttccga tgctgaagtc gtagccgaag tcgatgtcga tcgtgagggt ctcgcccgca
    10261 ccgaccgtca ctttcgcata ttggctcgag ccgccttccg cctgcacgaa aagcgaggtg
    10321 tgcggaatgc ttgcatcctc gaagaacggg ttttcatcag tggtccaata ggccgcattg
    10381 ttgatgctga ccggagcgtc tccgttggtc gtcgtcccgt aggttaacgg cgtgacgctg
    10441 tcgccaagga tcaagtcgtt tccgtttccg ccgtcaacgg tgctgtttcc gccaccggcg
    10501 atgataaagt cggaattcga ggttggagtg gtggtccata gcttgatcgc catcagacaa
    10561 tcctttcagc gttagcggtg aagcgggctt tgaagtctcg ttgggatgat cgccgagaaa
    10621 gccgggtcga ccggttcggc gccaggatca ggggtgcgtc gaacgcaccg cgagcgtgac
    10681 aatcctgttg tcagtcgagt caattcgcag gccctccaaa cggggccacc caccgccggc
    10741 attgcgccga taagaaagtc taatcttaga aagataataa agccaatgaa aaaagcagcc
    10801 caatcattaa tgcagttaca ccaaattgcc gaataactgg cgatgattac tactaacttt
    10861 agataatatc gtcagtggcg cttcgtttcg gccgacgaac gctcacgagc ggcgctcggg
    10921 gtagcggcta tggtctctag aaggcgccga gcgctgccag catcacgacg aagaacgcga
    10981 tcgcgagcgt tgcaaagaga agaagcgcgg cggttcgcca cagcgcagcg aagcggccga
    11041 cagcataggc tccgcgcagt tggcgataga tgtggaccgg cattgccagc atgacgagtg
    11101 gggcaagcgg ctcgtagagc cttccgagca acattgaact gacgatcagc aatgtcgcga
    11161 agctcagcga gtaagtgacg aagacgagat ggtcgtagga ggtcagttcg cgccggtatc
    11221 gccgccggtg caggaacaat atccacacga agggcaccga aatcggaatg agcgcccagg
    11281 aaaacttata ggcgttggcc tgcatcttgt agaggagcag ctccgggttc gcggccgcct
    11341 tttgcgcgac tggcttgagc cacgcgggaa catcgtcgct gatccggacg gcgctaccac
    11401 gggcaaggcc ctgatcgcgc acagttcgaa acagctcggc ttcctggcgc aggttgtcga
    11461 tccgcctgtc gattgcgccg gtgtccgcgc cgcgggcctc ggccgccgca cgctcctgtt
    11521 ccgagttggc gatctgccgg tcgaggtcgc gcagttcctc ctgcaggcct tgcttgaccg
    11581 gtccggcatc ggcttcgaag gaactgccag taatcgtgaa tatggcgaac atcgcgaata
    11641 cgctgaacag aaacagcgcc agcggcgaga cgaacttcgc ccgctcgccg tgaacgtagc
    11701 gccgggtgag ctcgccgggc cgaatcacca gcatctggac ggtccgccag aacttgccgt
    11761 cgatgtgaag cacactgtga agaaagtcgt gccaccacgc gccaagcgtt cgatgcacgt
    11821 gcgcatgctg cccgcacatg gcgcaatagg gcccggtcaa gtcggcgccg caattcaggc
    11881 agcgggtctc gtgcgtgtgg ccgtcatcgc gggactgctc ggtcggctgt tccgcgacgc
    11941 cggacgtgcc cgagtcaagc gcctcacgat ccggcattcg ctcccccttt ggcggccgac
    12001 attaggcggc gatgggccgc catgctagct gggcggcgat gaagcgcatc gggcttcttg
    12061 gcggatcgtt caacccggct cacgaagggc atcggcaact gagcctggcc gcaatcgacg
    12121 cccttgccct cgacgagatc tggtggctcg tgtcgcccgg caatccctta aaagacagcg
    12181 cgcccgacat ggcgccttat gaggctcgga tggagtccgc ccggaagatt gccgcgggaa
    12241 aggcgatacg cgccagcgat ttcgagcggc gcgccggcac ccgctacacg gtcgatacgc
    12301 ttcgcgcgct cctgcgcgaa catccggacg accgcttcat ctggctgatg ggggccgaca
    12361 ctgttgctga atttcatcgc tggaaggatt ggcgaaccat cgcgcaactc gttccaattg
    12421 cagtgcttcc gcgccccggc tatgatgagg ctgcccgcgc ggcgcgcgcg atgggctggc
    12481 tgtcggggtc cgtccgcccc gaaagccagg caaaatgctg gacggagtgg agtccaccgg
    12541 cgattttgtt tcttcgcctg ccgaccaacc ccacctccgc aaccgccttg cgcgcgcttg
    12601 accccaattg gcaccgccga aagcgtcccg ggacctcccg ttcgcgcgcc ggcggaacgc
    12661 ctacctaagg agacgccttg cccaaccctc cagccgagac cgccgttaac ggccgtcctt
    12721 cagccgaagt cgacaagctc cacaagctcg tgctcaagtc gctcgacgac gaccaggccc
    12781 tcgaaatcac gtcgattccg ctcgagggaa agtccagcat cgccgaccat atggtgatcg
    12841 cttcggggcg atcgacgcgg caggtcgccg ccatggcgac caaacttgcc gagcggatca
    12901 agcaggaatt cggacgaagc gtgcggatcg agggactacc cgctgccgac tgggtgctaa
    12961 tcgatgccga tgatgtcatc gttcacctgt tccggcccga agtacgaagt ttttacaatt
    13021 tggagcgaat gtgggccttc ggtgacgaga agatgagtgc aacagctcag ggtgggtgag
    13081 cgatgcgacg actgactgcc tttctgttct gcctgatggc attcgccgcc gcgccggccg
    13141 cggccgcgca acatccgcgg gtcgcgtcgc ttcagaacga gctgtcggcc ctcgtcacca
    13201 ccaagtcggc cgacgtgggc attgccgcca tcgatctcac gaccggggaa atggtcagcg
    13261 ttcgcggaag ccagcgctac ccgctggcga gcaccatcaa ggtcgctgtc gcggcgacct
    13321 atctctccta cgtagagaaa ggcgaccgat cgcttgacga cacgataagc ggatcttccg
    13381 ctgcaagcct gatgaggcgg atgctggttc acagcgacaa tcacgccacc gaccttttga
    13441 tccgcaacct cggcggaccg aagacggtgc aaaagtggct cgactggcat catgtcgaag
    13501 gcattcggat cgaccgcacc atcgcccagc tgcttcgcga caagcgcgac ctctacgacc
    13561 atcgcgattc cggcactcca gtggcgttcg cgaagttcct ggccaggctc gatgccggtt
    13621 acctgatcaa cgacaagagc aaggcttacc tgctcgacct gatggcgcag tgcatgacgg
    13681 gacggaaccg gatgaaatcg atgctcccgt cgggaacccg cgtcgagcac aagaccggca
    13741 cgctcaacgg cctgagcgac gacgtcgggt tcatcacgct gccgagcggc catcgggtcg
    13801 cggttgcgat cttcgcccgc ggcgggagca accggccgcg cgcaatcgcc gaagccgcaa
    13861 aggcggtcta cgacggattc ctcgcgacgg tccgctggcc gtacaccgca gcgtccgcga
    13921 tcagcgggcg gtaagctgct cctacacatc gtcgcccgcg gaaagatcgg ccgatcgccg
    13981 gaggccgact tggtcgagcg ctacctgaag agaataagct ggccgacgaa gcttacggaa
    14041 ttggccgacg atggccggcc cgcaccgccg ctcccggcca acggtgtctt ggtggctctc
    14101 gacgaacgcg ggaaagcgct gtcgtcgacg gaactggcgc aggcactcga tagctggagg
    14161 gactgcggca agcgcgaggc gcgcttctcc atcggcggcg ccgacgggca cagcggcgcc
    14221 gaccgttccg ctgccgatat gctgctgtcg ttcggtccgg cgacctggcc gcacctcctg
    14281 gtccgggcga tgctcgccga gcaactgtac cgggcgacgt cgatccttgc caaccatccc
    14341 tatcaccgcg aaggctgagc ggatgttccg gctcgcatca accgtcctcc tcgcagccgg
    14401 ttcggcagcg atcgccgcga gcgctccggt gcggccggag cagcttccgc tcgatcttca
    14461 gctccaacag gccaggagcg aggccaatgc ggcggtcgcc gagcagcgcc ggctcgagaa
    14521 ggctgcggcg gaagcgcggg acgaagtgac ccgcctccgg gcgcgacagc tagcggccgc
    14581 ccaggcaatc gccgccgccg aagcccggat cagcgcggcc gacgctcgcg cccgactggc
    14641 ggcggcacag gtcgcagcgc aacggcagcg gcttgcgcaa gagcaggcgc cggcgagcgc
    14701 ccttctcggc ggcctggctc tcaccgcgcg gcgcccgcct ctgctgttgc tcgcagattc
    14761 aggatcggca gacgaaatcg tcaaacttcg aatcctggtg gctgcgaccg ctcccgccat
    14821 tcgcgcgaaa accgcggcgc tttcccgtga attcgacaat gcacgccggc tggaaaaggc
    14881 ggcgatcgcc gctcgagact cgctgcaacg gagccgaggc gagctgcacc gccgccgcgc
    14941 ggagttcgcc gctttggagc agcgcgctct gcaagtggcg cgacgacgcg gctcgcaagc
    15001 gctcggcgcc ggcgacctcg ccctcgtccg acaggagcgg cttgcgattg ctgagcaagg
    15061 cacttcatcc aagcaagctt cagcgagcct tgcgcgggag ctggcggaac tgggaccggc
    15121 cccggtcgcg gccacgggca gtccccaggc ggcgccgctc cgctacaggc tgccggccaa
    15181 cgctcttgtc agcgacggcc ttggagggat cagcgccaac ggcgtgcgat cgcgggggat
    15241 gacgctggcg acacagcgcg ggacgaccct cgccgcgccg gcatcgggga cgatcctctt
    15301 cgccgggcct tttcgagatt acgacggagt ggtgatcatc gaccacggcg gcggctggaa
    15361 gtccgtgctc gtcaacgccg gatcgaaatt gcccaaggga gccgccgtac gaatgggcga
    15421 cccgttcgca atcgccttcg gcccggtgga agtgcagctc cagcgcaatg gcgaggcggt
    15481 ttcgccagcc ctaatcgcag gttcatctgc gaaggtgtca aatccccgca aaggcggcta
    15541 acatcgtgtc gaacgcgatc ccaaggcagt taccgatgaa aacgattcac aagatcctcc
    15601 cccctctcgc tcttgtcgga gcgctcgcgc tggtcccggt gaccacgagc tcgctcgccg
    15661 cccaggacgc ggcaaattat aaagagctcg agaagttcat gagcgtctac gagcgggtga
    15721 aggcgaatta cgtcgagccc gtcgacgacc acaccctgat caagggcgcg atcgacggga
    15781 tgctggccgc gctggacccg cattcctcct acctccagga cagcgatttc gacacgcttc
    15841 ggagcacgac cgacggcaat tacggcggcc tcggccttac ggtttcgatc gaggacggcg
    15901 cggtgaaggt gatcgccccg accgaggaca ccccggcctg gcgcgccggg atcaaggccg
    15961 gcgactatat cacccacatc aacggcgacc tggtctacgg cgagtcgctc gacgaggcgg
    16021 tcgacaagat gcgcggggcg cccggaacat cggtcaagct caagatcgtc cgccccggcc
    16081 gcgacaagcc gttcgacgtg tcgatcgttc gcgagcggat caaccttcgc ccggtaaaat
    16141 gggaggtgaa ggacggaatc gcgatcatcg acatcaacac gttctccggc aacgccgctg
    16201 aggagactcg ggctgcgctg tcggcggtcg acaaggccac cggcgggaag ccgctcggct
    16261 atatcctcga ccttcgctcc aatcccggcg gccttctcga ccaggctgtg gacatcagcg
    16321 acgccttcct gagccgcgga gaaatcgtct cgcagcgcgg ccgcgagaag ggcgacatcg
    16381 agcgctatta cgccaagccc ggcgacatgg cgcacggcct gcccgtcatc gtcctggtcg
    16441 acgtcggaac cgcatcggca gccgagatcg tcgccggtgc gcttcaggac cagcgacggg
    16501 cgctggtgat gggcgaaaag agcttcggca agggcagcgt ccagacggtc gtccaaacgg
    16561 gcccgcgttc ggcgctccgg ctaaccaccg cccgctacta tacgccgtcg ggccggtccg
    16621 ttcaggccgg tggaatcgat ccggacatcg ccgtcccgca actgtccgac cccgactatg
    16681 agaaccgccc ggcaattcgc gaggcagacc ttcggcggca tctgctcgcg caggtcaagg
    16741 cggacgacaa gctgctgcag catgacgata cgtcgcagga cccgcgcttc tccgtcaccg
    16801 ccgaggagct ggagaagaag ggcatcaagg acttccagct ccactacgcc ctgaacacgc
    16861 tgaagcggct tgggtcgcga acagcggtcg catccgcggg cggcaaatcc ggctccaggc
    16921 gatagcgcgc ggccagggtg gctgaagcga cgctcgaagc gcaaggaacg atggtgtcga
    16981 cccgcgctca acgggggcgc ctccttgctc tccttttgcc gctcgccctg ctaggagggg
    17041 cgctggggtc gcaatatttc ggcggcctct atccttgcga gatgtgttac tggcagcgct
    17101 acccgcacgg agccgccatt ctccttgcgc ttgttgcgct attctccccc gccgattctc
    17161 gccgctcgcg cacgctgacg ctcatcgcgg cactcgcgat cgcggtctcg ggcgcgatcg
    17221 gcgtctatc
//
LOCUS       DATAKH010000231         4816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_14036,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000231 DATAKH010000000
VERSION     DATAKH010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4816
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14036"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="VHN55_09895"
     CDS             complement(<1..201)
                     /locus_tag="VHN55_09895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804273.1"
                     /translation="MKTFIMLAGAAALAFAGPAVAKPGHGHGQAHGKGHAHAVGAGHS
                     PVGYGVGGCPPGLAKKNPPCMPP"
     gene            complement(316..786)
                     /locus_tag="VHN55_09900"
     CDS             complement(316..786)
                     /locus_tag="VHN55_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804274.1"
                     /translation="MTKLLLIVGAAALATAGPALSKPPHAKGHGKPPAAHVAKGKPAK
                     AKPLMRAQDRNRNGILDADEALARKYGGALCPPGLAKKTPACMPPGQAKRIFREGQRV
                     AGNYRYYTPYGDIPLSLRDRYDLSDDYRYIYRDNAIYVVDPATSLVTRIIDAIL"
     gene            976..1938
                     /gene="mdh"
                     /locus_tag="VHN55_09905"
     CDS             976..1938
                     /gene="mdh"
                     /locus_tag="VHN55_09905"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEX2804275.1"
                     /translation="MARKKIALIGAGMIGGTLAHLAAMREMGDVVLFDIAEGIPEGKA
                     LDIAQAGPVDDFDAKLKGTSDYADIAGADVCIVTAGVPRKPGMSRDDLLGINLKVMKA
                     VGEGIKKHAPDSFVICITNPLDAMVWALREFSGQPHNMVVGMAGVLDSARFRHFLAEE
                     FQVSVEDVTAFVLGGHGDTMVPVVEYSTVAGIPIPDLIKMGWSTQERIDAIVKRTRGG
                     GGEIVGLLKTGSAFYAPATSAIAMAESFLKDKKRVLPAAAHLTGQYGVDNLYVGVPVV
                     IGAGGVERVVEIDLKDEAKANFQVSVDAVKELLVACKQIDGSLA"
     gene            1950..2432
                     /locus_tag="VHN55_09910"
     CDS             1950..2432
                     /locus_tag="VHN55_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804276.1"
                     /translation="MFELVIAAATLAANAPQGLFHPDVPFQQLERAYRDCLAAVTSSE
                     VRRDVLEKNGWKPLPIKFIGDDSPPVKLDIRARSDGLTTISLPTKEGEVWCSVSAPVN
                     GESAYNQLVDSFAGSLSDADSDGKRIAIVDGRKIAVSFNREASDEGTIIVRVSALEQQ
                     "
     gene            2429..3319
                     /gene="sucD"
                     /locus_tag="VHN55_09915"
     CDS             2429..3319
                     /gene="sucD"
                     /locus_tag="VHN55_09915"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006831917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEX2804277.1"
                     /translation="MSILVDSSTKVITQGMTGDTGTFHTRQALDYGSKMVGGVTPGKG
                     GTEHLGLPVFDTVAEAVEKTGATASVIYVPPPFAADSILEAIDAEVPLIVTITEGIPV
                     LDMVRVKRALCGSKSRLIGPNCPGVLTPGECKIGIMPGNIFKKGSVGVVSRSGTLTYE
                     AVFQTTNEGLGQSTAVGIGGDPVKGTEFIDVLEMFLADDETQSIIMIGEIGGTAEEDA
                     AQFLADEAKRGRRKPVVGFIAGRTAPPGRRMGHAGAIVSGGKGDAESKIAAMEAAGIT
                     VSPSPSELGTTLKELLSAVA"
     gene            3316..>4816
                     /locus_tag="VHN55_09920"
     CDS             3316..>4816
                     /locus_tag="VHN55_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX2804278.1"
                     /translation="MNDVAGVIEPKQGPSWARPNWPVSELDDVNLGLDPTEASIEAVK
                     KAARDEAAATTADSDAIRRAAEDSIRAMMLIRTYRVRGHLAAKLDPLGLHHNAVPADL
                     TPAYHGFSDADLDRPIWIGGVLGLERATVREIVAVLQDNYCGTIGVEYMHINDLEERR
                     FIQERIEGMDDTVQFTPEGKQAILAKVIEAEQWEKFLARKYVGTKRFGLDGGESAIPA
                     LESVIKYGGLMGVEEIDIGMSHRGRLNVLSNVMGKPYRAIFHEFAGGATNPADVGGSG
                     DVKYHLGTSSDREFDGVCVHLSLLPNPSHLEAVDPVVLGKARATMTFKGDKHGKKVLP
                     LLLHGDAAFAGQGVVAECLSLSGLPGYGTGGTVHFVINNQIGFTTSPQFGRSSPYPTD
                     IAKSVQAPILHVNADDPEAVTFCCKMAIEFRQTFGRDIVIDMWCYRRFGHNEGDEPSF
                     TQPQMYSAIRNQPPISEIYGARLIEEGVVDKQWIADHRQNYIAHLNQEFE"
BASE COUNT          930 a         1518 c         1549 g          819 t
ORIGIN      
        1 gggtggcatg caaggcgggt tcttcttggc aaggcccggc gggcagccgc cgacaccata
       61 gccgaccggc gaatggccgg ccccgaccgc gtgggcgtgg cccttgccat gcgcttgtcc
      121 atgaccatgg ccgggctttg ctacagccgg gccggcgaaa gcgagtgccg cagcgcccgc
      181 gagcatgata aatgttttca tgcctttgac gtagcggcga aaagctgaac gggcgttgag
      241 cagcctggtt acttgttggt caggaaatct gccgggcaaa gggccgccgc aggcgcggcg
      301 gccccaaatt cgcccttaga ggatcgcgtc gatgatcctc gtcaccaggc tcgtagcggg
      361 atccacgaca tagatcgcat tatcccggta gatgtaccga taatcgtcgc tcaggtcgta
      421 ccgatcccga agcgacagcg ggatgtcccc gtaaggcgtg tagtagcgat aattgcccgc
      481 tacccgctgg ccttcgcgga agattcgctt cgcctgtccc ggtggcatgc aggccggggt
      541 tttcttggca aggcccggcg ggcacagcgc gccgccatat ttgcgggcga gcgcctcatc
      601 ggcgtccagg atgccattgc ggttgcggtc ctgggcgcgc atcagcggct tggccttggc
      661 gggcttgccc ttggccacat gggcggcggg cggcttgccg tgcccctttg cgtgaggcgg
      721 cttggaaagc gccgggccag ctgtggcaag cgcagccgca ccgacgatca acagaagctt
      781 cgtcattctc aatctccaaa gggagcaatt ccctgattgc ggcgaaaacg aacggcaggg
      841 aggccggttt ctgcgccgtt catctggggg acagcttggc ccggttgctc cgcttcggcg
      901 agcggtctag agcgccgcca aattctgcgg agccgactcc ggtgcaacca accaatggaa
      961 ggaaacagca gcttcatggc tcgcaagaag atcgcattga tcggcgccgg aatgatcggc
     1021 ggtacgctcg cccacctggc ggcaatgcgc gaaatgggcg acgtcgtgct gttcgacatc
     1081 gccgagggca ttcccgaggg caaggcgctg gacattgcgc aggcgggacc agtcgatgat
     1141 ttcgacgcga agcttaaggg cacgtccgat tatgccgaca tcgccggcgc ggacgtctgc
     1201 atcgtcaccg ctggcgtgcc gcgaaagccg ggaatgagcc gcgacgacct gctcgggatc
     1261 aacctcaagg tgatgaaggc ggtcggagaa ggcatcaaga agcatgcgcc cgacagcttc
     1321 gtcatctgca tcaccaaccc gctcgacgcg atggtgtggg ctctgcgcga attctccggt
     1381 cagccgcaca acatggtcgt cggaatggcg ggcgtgctcg acagcgcccg cttccgtcac
     1441 ttccttgccg aggagttcca ggtcagcgtc gaggacgtca ccgccttcgt gttgggcggc
     1501 cacggcgaca cgatggtgcc ggtggtcgaa tattcgaccg tcgccgggat cccgatcccc
     1561 gaccttatca agatgggttg gagtacccag gagcggatcg atgcgatcgt caagcggacc
     1621 cgcggcggtg gcggcgagat cgttggcctg ctgaagaccg gaagcgcgtt ttacgccccg
     1681 gcgaccagcg caatcgcgat ggccgagagc ttcctcaagg acaagaagcg ggtgttgccc
     1741 gccgcggcgc atctgaccgg ccagtatgga gtcgacaacc tctacgtcgg cgttccggtg
     1801 gtaatcggcg ccggcggcgt cgagcgcgtc gtcgagatcg acctaaagga cgaagccaag
     1861 gccaatttcc aggtcagcgt cgatgcggtg aaggagctgc tcgtcgcgtg caagcagatc
     1921 gacggaagcc ttgcatagcg gagtttagaa tgttcgaatt ggtcatcgca gcagcaacgc
     1981 tagcggcgaa tgcgccgcag gggctgttcc atccagacgt cccgttccaa cagcttgaac
     2041 gggcctatcg cgattgcctc gcagcggtaa cttccagcga ggtgcgccgc gacgtgctgg
     2101 agaagaacgg ttggaaacct ctcccgatca agttcatagg cgacgattca ccgccggtaa
     2161 aactcgacat tcgcgctaga agcgacgggt tgacgaccat ttcactgccg acgaaggaag
     2221 gtgaggtctg gtgcagcgtt tctgcgcccg tgaacggcga atctgcatac aaccagcttg
     2281 tcgactcatt tgctggcagc ctttccgacg ccgattctga cggcaagcgc atagcgattg
     2341 tcgatggccg taaaatcgcc gtttcattca atcgcgaggc gagtgatgaa ggcacgatca
     2401 ttgtgagagt tagcgcgttg gagcagcagt gagcattctc gtcgacagca gcaccaaggt
     2461 catcactcag gggatgaccg gcgacacggg cactttccac acgcgccagg cgctcgatta
     2521 tggctcgaaa atggtcggcg gcgtgacccc cggcaaaggc gggaccgagc atctcggcct
     2581 gccggtgttc gacacggtcg ccgaagcggt ggagaaaacc ggcgcgaccg cgtccgtcat
     2641 ctacgtcccg cctccctttg cagccgattc aatcctcgag gcgatcgacg ccgaggtgcc
     2701 gctgatcgtc accatcaccg agggcattcc ggtgctcgac atggtccgcg tgaagcgggc
     2761 tttgtgcggc tccaagtcgc ggctgatcgg gcccaattgc ccgggcgtgc tcacccccgg
     2821 cgagtgcaag atcgggatca tgcccggaaa catcttcaag aagggcagcg tcggcgtggt
     2881 cagccgctcc gggacgctca cttacgaagc cgtgttccag accaccaacg aagggctcgg
     2941 ccagtcgacg gcggtcggga tcggcggcga tccggtgaaa ggcaccgagt tcatcgacgt
     3001 gctcgagatg ttcctcgccg acgatgagac gcaatcgatc atcatgattg gcgagatcgg
     3061 cggaaccgcc gaggaagacg ccgctcagtt cctcgccgac gaagccaagc gcgggcgcag
     3121 gaagccggtg gtcggcttca tcgccggccg aaccgctccc cccgggcggc gcatgggcca
     3181 tgccggcgca atcgtctcgg gcggcaaggg cgacgccgaa agcaagattg cggcgatgga
     3241 ggcggctgga attaccgtgt ctccaagccc atctgagctc ggaaccacgc tcaaggagct
     3301 gctttcagcg gtagcatgaa cgacgtcgcc ggcgtgatcg aacccaagca gggcccaagc
     3361 tgggcgcggc cgaactggcc cgtcagcgag ctcgacgacg tcaacctcgg gctcgacccg
     3421 accgaggcgt ctatcgaggc ggtgaagaag gcggcgcgcg acgaggcggc cgcgaccacc
     3481 gccgactccg acgcgatccg ccgcgccgcc gaggattcga tccgggcgat gatgttgatc
     3541 cgcacctatc gcgtgcgcgg gcatctcgcg gcgaagctcg acccgctcgg actgcaccac
     3601 aacgccgtcc ccgccgacct tactcccgcc taccacggct tttccgacgc cgacctcgac
     3661 cggccgatct ggatcggcgg agtgctgggc ctcgagcgcg ccacggttcg cgaaatcgtc
     3721 gccgttttgc aggacaatta ctgcggcacg atcggcgtcg aatatatgca cattaatgac
     3781 ctggaggagc gccgcttcat ccaggagcgg atcgagggca tggacgacac ggtccagttc
     3841 acccccgagg gcaagcaagc gatcctcgcg aaggtcatcg aggccgagca gtgggagaag
     3901 ttcctcgccc gcaaatatgt cgggaccaag cgcttcggcc tcgacggtgg cgagagcgcg
     3961 attcccgcgc tggaatcggt aatcaaatat ggcgggctga tgggtgtcga ggaaatcgac
     4021 atcggaatgt cccaccgcgg gcgcctaaac gtcctttcca acgtgatggg caaaccgtac
     4081 cgggcgatct tccacgaatt cgccggcggc gcgaccaatc cggccgacgt cggcggatcg
     4141 ggagacgtca aatatcatct cggcacttcg tccgaccgcg agttcgacgg ggtttgcgtg
     4201 cacctgtcgc tgctccccaa cccgtcgcac ctcgaagcgg tcgaccccgt agttctcggc
     4261 aaggcgcggg cgacgatgac cttcaagggc gacaagcacg gcaagaaggt cctgcccctg
     4321 ctcctccatg gcgatgccgc tttcgccggc cagggagttg tcgcggaatg cctgagcctg
     4381 tccggactgc ccggctacgg caccggcggc accgtccatt tcgtgatcaa caaccagatc
     4441 ggcttcacca ccagcccgca gttcggccgt tcgtcgccct acccgaccga catcgccaag
     4501 tcggtccagg cgccgatcct ccacgtcaac gccgacgacc ccgaagcggt gaccttctgc
     4561 tgcaaaatgg caatcgagtt ccgccagacg ttcggccgcg acatcgtcat cgacatgtgg
     4621 tgctaccgcc gtttcggcca caacgagggc gacgagccga gcttcaccca gccacaaatg
     4681 tattcggcga tccgcaacca gccgccgatc agcgaaatct acggcgcccg gctgatcgag
     4741 gaaggggtcg tcgacaagca gtggatcgcc gatcaccgcc agaactacat cgcccatctc
     4801 aaccaggaat tcgagg
//
LOCUS       DATAKH010000232        21447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_34101,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000232 DATAKH010000000
VERSION     DATAKH010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 21447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21447
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34101"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..643)
                     /locus_tag="VHN55_09925"
     CDS             complement(182..643)
                     /locus_tag="VHN55_09925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010125250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX2804279.1"
                     /translation="MYEVGPDEFSERWAPTVIGVLRIVTALLFFEHGTAKLLGFPETG
                     MAYPAMWSLPWVAGVFEIVGGFLLLIGLWTRWVALLLSGEMAVAYWYVHAAQSPFPII
                     NNGEGAILYCFIFLTLFVVGAGNFSVDQMIARKASPVEGYAAPGGERSLEE"
     gene            complement(779..1342)
                     /locus_tag="VHN55_09930"
     CDS             complement(779..1342)
                     /locus_tag="VHN55_09930"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX2804280.1"
                     /translation="MLASGIARQYLDTALTALKDAEGWRAVLDELPVPIYTTDADGAV
                     TYWNDACVKLVGREPRAGEDRWCVTWKLYTTSGDPLPHDECPMARAIREKREIHNDII
                     IAERPNGQRVACRPYPTPIFDDQGKLEGAVNMIIEMTNEQAAELGEQAARCRRLAKAT
                     TDARTAEILDSMARGYASTAAMLKPAV"
     gene            complement(1467..1745)
                     /locus_tag="VHN55_09935"
     CDS             complement(1467..1745)
                     /locus_tag="VHN55_09935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804281.1"
                     /translation="MTETRGEDRAQTAKRNDDSDIIDAAADEAVAGGAHQQGREGGNL
                     QADLATQAERRRATDPNAHESVKKGDHVAHGQGETPPHPATEVVSDRD"
     gene            complement(1801..2529)
                     /locus_tag="VHN55_09940"
     CDS             complement(1801..2529)
                     /locus_tag="VHN55_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX2804282.1"
                     /translation="MSNGNPSGLDSNIALLIDADNASPEHLDEVLLVLGELGTINIRR
                     AYGNWAKASLKGWGDLSGLHSIVPMQQFDVVKGKSATDMRMTIDAMDLLDRGNVDGFG
                     IMSSDSDFLPLAQRIREEGLPVYGFGTAKTPLSFRQACTRFFDVAALVAQQPVEGETE
                     RQVKERPVDEALLEVLGHAYKASERDEDGYTTLSELGQRAKAVSSFATRNYGYTRLSD
                     LLRAIPNFDVKTRPDGRLLVKRLR"
     gene            2708..3067
                     /locus_tag="VHN55_09945"
     CDS             2708..3067
                     /locus_tag="VHN55_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015456801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804283.1"
                     /translation="MKRLALSAALAGTIALTGCTTNPYGYNSGYGYGYNSPYYQNNGQ
                     LGDAATGAAVGAAGGAIAGAVIPGVSTGEGAIAGAILGGVLGAVRNGRQYYRDTRGYC
                     YYVDQYGRPHYDYNVRC"
     gene            3280..3588
                     /locus_tag="VHN55_09950"
     CDS             3280..3588
                     /locus_tag="VHN55_09950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804284.1"
                     /translation="MKHLLLSAAAASSLALGGCTTAYDRHVASTTTTGAVVGAGAGAI
                     AGSVLPGIGTATGAVAGAVLGGVVGAVVGDRQYYRDTRGYCYYVDRYGQPHYDYNVKC
                     "
     gene            complement(3599..4231)
                     /locus_tag="VHN55_09955"
     CDS             complement(3599..4231)
                     /locus_tag="VHN55_09955"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEX2804285.1"
                     /translation="MRFTRLIEGYRRFREKEWPRERERWTELAEGQSPKVMVIACADS
                     RTDPAQIFDTRPGEIFVVRNIAALAPPFETTAGYHGVSAALEFGVTQLEVEEVLVLGH
                     GSCGGCNAALTGQFDHAQAGEGRFIANWVSMLHPARDRVRSHHDAIGPAAILEMEWEA
                     VRLSLSNLRTFPWIAEREKDGRLKLHGAHFSISEGRLYVLDEAEGTFRPA"
     gene            4297..5217
                     /gene="lipA"
                     /locus_tag="VHN55_09960"
     CDS             4297..5217
                     /gene="lipA"
                     /locus_tag="VHN55_09960"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015456970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEX2804286.1"
                     /translation="MNAPAAVPPKQRKPDWIRVKAPTSPGYHATRRLMRDLNLATVCE
                     EAACPNIGECWTKKHATVMILGDTCTRACAFCNVKTGMPRAVDPLEPEHVATAAAELG
                     LEHIVVTSVDRDDLPDGGASQFVKVIEALRRNTPNTTIEILTPDFRNKAESAVDAIVA
                     AGPDVFNHNLETVPRLYPTIRPGARYYASLRLLESVKRKAPHIFTKSGVMVGLGEQRL
                     EVHQVMDDMRSADIDFLTMGQYLQPTPRHAKVEEFVTPKAFEAYAAIARAKGFLLVAA
                     SPLTRSSYHAGDDFRKMQEARAAQLERAKG"
     gene            5217..5678
                     /locus_tag="VHN55_09965"
     CDS             5217..5678
                     /locus_tag="VHN55_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEX2804287.1"
                     /translation="MPRHSETRHLPYTPEQLFDMVADVASYDEFLPWVVAVRIRSSSE
                     TETVADLIVGFSAFKERFTSRVVKERPDRICVDYVEGPLKYLHNEWTFERAADGGTNL
                     HFSVDFAFRSRLFEALAGQMFDRALRRMTGAFERRAATLYGMSRSSAQSAA"
     gene            complement(5639..6142)
                     /locus_tag="VHN55_09970"
     CDS             complement(5639..6142)
                     /locus_tag="VHN55_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEX2804288.1"
                     /translation="MSERLLPQALYDRARQVVEANRKLGRRVAVAESCTGGLVCAALT
                     EIPGSSEIFEAGYVTYSNASKIDDLGVSAEVVETFGAVSVATAWAMARGALAASKADV
                     AVAITGIAGPGGGTPSKPVGTVVFACAERGADPSQIVADQKFFDEKDRAGVRLQAALC
                     ALDLLIP"
     gene            complement(6139..7281)
                     /locus_tag="VHN55_09975"
     CDS             complement(6139..7281)
                     /locus_tag="VHN55_09975"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008599441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HEX2804289.1"
                     /translation="MTTTALIVAAGKGERLGGGIPKQYRLLGGKPVVRHAVEALASHP
                     AIGSVRVVVGSGQQALAGEALSGLDVGALIEGGAERADSVRAGLAEAEGDAVLVHDAA
                     RPFCPHPVIDRLLAPLEFFDGAAPVLEIRDTLARASDRLEQAVDRNGVVRVQTPQAFR
                     LTALRGAYDRWSGPAPTDETTVARAAGLKVAAVEGDAALEKITSPADFERAEQWLASR
                     LVTRTGTGFDVHAFAGEGPIMMGGIAIPHPRGLAGHSDSDVVLHAITDALLGAAGFGD
                     IGEHFPPSDSQWQDAPSELFAARAAELIAKSGGRIDHVDCTIICEEPKVAPHRLTIRA
                     KVAAILRIREDHVSIKATTTEGLGFTGRREGIAAQAVATIRLGGRQ"
     gene            7347..8345
                     /gene="dusB"
                     /locus_tag="VHN55_09980"
     CDS             7347..8345
                     /gene="dusB"
                     /locus_tag="VHN55_09980"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015456975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEX2804290.1"
                     /translation="MSMLKPIHIGPVRIDTPVILAPMTGVTDLPFRRVVKRYGAGLTV
                     SEMIASQAMIRETRQSLQKSLWDPSEQPVSLQLAGCEPEVMAEAAKLNEQRGAAIIDI
                     NMGCPVRKVVNGDAGSALMANLPLATRLIEATVNAVKLPVTLKMRMGWDHSTLNAPEL
                     ARIAEDLGVKMITVHGRTRCQMYKGSADWAFVRRVKDSVSVPVIVNGDICSVEDAREA
                     LGQSGADGVMIGRGAYGRPWLLAQAIAELVTESAWAEPSLDEQLSTMLAQYDEMLSLY
                     GRQTGVNLARKHIGWYTKGLPGSAELRNTVNQQDDPAVVVAMLREFYGPWLTRAAA"
     gene            8368..8889
                     /locus_tag="VHN55_09985"
     CDS             8368..8889
                     /locus_tag="VHN55_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010183625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEX2804291.1"
                     /translation="MTAYLKLLATSSLLAALAGPAASQAPVLDPVSMRLLAAHNRERA
                     AVGAPPMAWDPALAAAAASYGPSLAAIGRLQHSPKQLRPGQRENLWMGTTGAYSPEQM
                     VSNWSAEKRMFRPGIFPAVSSTGNWLDVAHYTTMIWRTTTRVGCAIHRTAAWEYLICR
                     YSPPGNIDGVPVP"
     gene            8954..9925
                     /locus_tag="VHN55_09990"
     CDS             8954..9925
                     /locus_tag="VHN55_09990"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019371045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase family protein"
                     /protein_id="HEX2804292.1"
                     /translation="MSIPKLLSRLRIPVIGAPLFIISNPKLVIAQCTAGIVGSFPALN
                     ARPASQLDEWLHEITEALAAHDREHPDRPAAPFAVNQIVHRSNDRFEADMAVCEKWKV
                     PIVITSLGAREDLNQAVHGWGGVTLHDIIDDFFARKAVAKGADGLIAVAAGAGGHAGR
                     WSPFALIQEIRAWFDGPLVLSGSIATGSAVLAAQAAGADIAYIGSPFIATPEARCSED
                     YRQAIVAGGAADIVNSALFTGIAGNYLRSSIERAGLDPDSLDKLDSVATEFGSEGSSR
                     TKAWRDIWGSGQGIGAIDKVQPAADYIAVLEREYADARERLCGATGR"
     gene            complement(9912..10418)
                     /locus_tag="VHN55_09995"
     CDS             complement(9912..10418)
                     /locus_tag="VHN55_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1465 family protein"
                     /protein_id="HEX2804293.1"
                     /translation="MESGNLMVMHDSNEAPEPEARITPRLVDSFYTEAMLLADEARSY
                     FDDAGREERSTLDPFVRVNFACESLKVTTRIMHIVAWLLTQRAIESGEIAYREGRRPE
                     RRLGNAQESDPAVVARLPEAAQRLVSASSDLYARVKRLDEGSVADEPTTSPARALMGR
                     LERGLTGQ"
     gene            10620..10784
                     /locus_tag="VHN55_10000"
     CDS             10620..10784
                     /locus_tag="VHN55_10000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEX2804294.1"
                     /translation="MDKAQAEALASKHAALHAMIDQEEHRPHPNEDLLHQLKKEKLRL
                     KDELAGHYEH"
     gene            complement(10846..11211)
                     /gene="dksA"
                     /locus_tag="VHN55_10005"
     CDS             complement(10846..11211)
                     /gene="dksA"
                     /locus_tag="VHN55_10005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013834409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEX2804295.1"
                     /translation="MSDIHRAYFLKKLREWKEAIIEESRQTMAQLQVDSLREPDIADR
                     ASSETDWSIELRTRDRQRKLICKIDCAIRRLYEGEYGYCEVTGDPISLARLEARPIAT
                     MTVEAQERHERIEKISRDD"
     gene            11615..12379
                     /gene="surE"
                     /locus_tag="VHN55_10010"
     CDS             11615..12379
                     /gene="surE"
                     /locus_tag="VHN55_10010"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010402825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEX2804296.1"
                     /translation="MRILLTNDDGINARGLDLLETVAQTFSDDIWVVAPTEEQSGAGH
                     SLTLTQPIRLRKHDNRRFSVTGTPTDAVMLALAHVMKDSPPALILSGINRGANLGEDV
                     TYSGTVSAAMEGALAGVRSIALSQSYSREGMGDLVPFAAAEAWAERALRPLIDYEPPP
                     GTLINVNFPALPPDKINGIRICRQGIRDYGRLRIDKRTDPRGYDYYWFGLGPMVQTPG
                     HLTDLEAMDDGYVSVTPLHLDLTHDPSLEVLRERFA"
     gene            12459..14555
                     /locus_tag="VHN55_10015"
     CDS             12459..14555
                     /locus_tag="VHN55_10015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX2804297.1"
                     /translation="MRPYLAALGFVAIAAVVRLVLDPFLGDRAPFLLFLLAVLISAAR
                     FGLWPGLAAAVVSGFLSVFLFVQPKFAFLPLAGDDLSNIIAFTVITTAVLLFVARIGR
                     LQSDVARREAKVELDVREQRLVDAAQDYAIYELDREGRILTWNKGAERLKGWKADEII
                     GKPYNILHTPESRAKSAPGRELKIAAQTGRFEEEAPRMRKDGTIFAAHVSLFPLRDDN
                     GEVTGFVKVTRDISNRSKAGRAILETRRRMEAIVQSAMDAIITFDEELRIVLFNPAAQ
                     RIFGYSEDEILGKQLEILFPERMADKQRQNFRVFFKGGEANRRFDGPDVLVAVRKTGE
                     EFPIEASMSQVTVDGERVGTVILRDITERKTNEEARALLAREVDHRAKNALAVAQALV
                     GLTKADTVEDFADAIRGRIASLARAHSLLSQSQWRGASLEQLIRDELLPYAKEGQLLL
                     NGQNVNCGAEAVQSLSLLFHELATNAVKHGALSSRNGHVTIEWRLENEWMRISWKEQG
                     GPPVVAPKREGFGTKLLNQVSGRQLNARLDFDWRADGLQVKIKLPADLFTTGEISGAP
                     DEVGDDLGGVVANGKERRILVVEDEELVALELSAELTRLGWAIVGPAATLSEAQSLLS
                     KPFDAAVLDVNLRGRSVYPVAEALKERHVPFVFCTGYEMVDPEGRFPTVPIIRKPAQP
                     AAISAALADLLKARAH"
     gene            complement(14567..15643)
                     /locus_tag="VHN55_10020"
     CDS             complement(14567..15643)
                     /locus_tag="VHN55_10020"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /protein_id="HEX2804298.1"
                     /translation="MARFTQDPVTGELIAESLHWGFALVPVLVLLAVFVWLDAFKLMS
                     LHEVLILLVLGGFGAFAAYPVSGRLIDALPIGFSFYSRFVAPWIEEAIKGAIMVGLFW
                     FNRIGYKLDAVISGFAVGAGFSVVENILYLTVYPEYGTGTWLVRGLGTAVMHGATMAV
                     LAAIAHELAERETREAAGEFDFTLLWFLPGYGIAVALHTAFNQFPDRPIIAMMGAVLF
                     APLAIIAIFHFGAAEAERWLVAERAAHEEQLATLRSGAWPDTPAGRKIAALAERLDPE
                     SAERIRRYWELQTWLVAQAEETMVEEAEGDAVFDERAIREALAELEWLKRSLGKSSFA
                     ALKTLLPFSRNDYWELSELRQRIS"
     gene            complement(15616..18669)
                     /locus_tag="VHN55_10025"
     CDS             complement(15616..18669)
                     /locus_tag="VHN55_10025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804299.1"
                     /translation="MSAASQPALAQQVPDPPPPDENPTAIVDPPPPEPEPPAAEPPAP
                     PPEEEAPQELKHSPKDASGLDLSTLETRNVSILYFDPVQTYLTPYVGKAFENAFQYHR
                     KMFDWEPWDRTTLLLKDFGDYGNAGARSSPSNAVLLDVAPLGQTMETFTPGERFFTLI
                     NHELAHVATTDIWNKSDARWRKFFHGKPSPSQDHPISILYNYLTVPRNNIPRWYAEGS
                     AVFLETWMAGGLGRAQGAYDEMVFRAKVRDGDKFYSPLGLESEGTSVDFQVGVNNYLY
                     GTRFFSYLALTYGPDKPIDWLKRPDGSAGFYASRFKQVFGKRLNQVWDDWIAFEQDFQ
                     KSNLAKLAAYPLTETRPLSPRGLGSMSRTYVDSARNQLVGAFYYPGTIGFVGTLDMAT
                     GKLRRLSDIKGMALYSVTSIAFDPDARKAYFTEDNYAFRDIVEVDVDSGKRRMLQRDA
                     RIGELVLNSADKSLWGIRHVNGFATIVRIPPPYSGFNQIHTFDYGTTVFDLDVSPDGT
                     MVSASVGEVDGKQSVRIWNRELLESGSGPEEVARLELPPAVPEGFTFSPDSKSLYGSA
                     YYTGVSNIVRFDIATQQFEIVSNASTGFFRPQLQPDGSLIVQEFSGQGMRPVSIVPQK
                     QEDLANVELLGTRVVNAHPVLKEWGVGSPAKVPLDDLVTERGHYIAGKRMAFGPGYPI
                     IMGYKGSPALGYLFHWEDPMQFNQLTATVAVSPFGERRDSERFHASLEYKTMKWSLRY
                     VHNGADFYDLFGPVERSRKGDAFIASYNHTKVYDPPRQLDLYGTAAVFLGLERLPGAQ
                     NIESPSNIFSAEAGVKYRNIRSSLGAVDREKGFAWRASAGADYAVGHVFPKIAAGLDY
                     GVPLPISNSSAWIYLHAGKGWGTEQSPLSNFYFGAFRNNYVDNRPVKRYREMESFPGF
                     DIDEINARSFVKATGEVNLPPIRFAEVGTPLFYLSSLRPAVFAGAMATDTADGGRRFY
                     DVGAQLDLNFTIALRLPMVLSVGAAAGFEDGHYRATEWLVSLKIL"
     gene            complement(18748..20307)
                     /locus_tag="VHN55_10030"
     CDS             complement(18748..20307)
                     /locus_tag="VHN55_10030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804300.1"
                     /translation="MTGTTANNRKLMISGAAIVLVAGAAYGLGRVYPPLGTTAGTIAP
                     SERYQSAQVGEADVTLGDTSVAELMQTDAFELMVKDPSFRALASDPGFAALAKNPEAM
                     AALAANPKAFEALARDPKAFQAMVQHAAAARGIDSLSARSIVAMAQHRDAFSALSRHP
                     EAFAAMSQNPAAFAAFSRDPAAFAAAAKNPASMEAMSRNAAAFEALSRDAGAMQALAK
                     NPAAFEALSRNAEAFQALAKNPSALAAAARQADTFGAQLRSANMMNAMAMEALARNAG
                     AFGALASQPAALQAIASQPAAFAALSRHPEALAAMARNPQTFGAFAKNAGAFEAAVRN
                     PSANGAMSRDAAAFQALSRDAAAMQALSRNPGAFEALARNAGAFQALAKNPAAFQAAM
                     RSDALQAIAKNPAAFGALARNPAAFSAAVRSAEAFQAQSIAASMAARGDMAAFQALSR
                     NPAAFSAISANPAAFQALAQQPQALAAFSRNAGAFQALGRNPQFGALAANPNFAALAQ
                     SPAFAQAIARQ"
     gene            20864..>21447
                     /locus_tag="VHN55_10035"
     CDS             20864..>21447
                     /locus_tag="VHN55_10035"
                     /inference="COORDINATES: protein motif:HMM:NF020068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEX2804301.1"
                     /translation="MRIDVEGGLERAPCALDKPEFGDIRFTLRGVEFDGLEGLEPDAL
                     ESSFAPLVGAEQPISVVCAIRDRALAILRDGGFIASIEVPEQRMSDGVIRFKVLLARL
                     TQVRVRGNAGGAEQIIAGYLNQLTRQPVFNRNDAERYLLLASDLPGYTVRLTLRPAGE
                     KPGDVIGDVTVERMPAYADLTVQNGGSRALGRWGA"
BASE COUNT         3876 a         6770 c         6884 g         3917 t
ORIGIN      
        1 ctgacccggc cgaaatgctg gcaaagtagg atttcgcctg ccagcctgcc tccggctctt
       61 tagaatccgt gaatctaccg tgagcgctca gtaagcgggc aactccgtga ctccctaaag
      121 tcacggaaat ggcgcctcat cgcgtgactt taatgacctt aagcgcgcgc tgacggcctt
      181 ttcactcttc cagggaccgc tcgcctccgg gcgctgcata gccttctact ggcgatgcct
      241 tgcgcgcgat catctggtcg acgctgaaat tgccggcccc gaccacgaac agggtcagga
      301 agatgaagca atagaggatc gcgccttcgc cgttgtttat gattgggaaa ggcgattggg
      361 cggcatggac gtaccagtaa gcgaccgcca tctcacccga caaaagaagg gccacccagc
      421 gggtccacag gccgatcaaa agcaggaagc cgccgactat ctcgaaaacg cctgcgaccc
      481 acgggagcga ccacatcgcg ggataggcca ttccggtttc ggggaatcca agcaactttg
      541 cggtgccatg ttcgaagaaa agcagtgccg taacaatgcg gagcacgccg atcaccgtgg
      601 gcgcccaccg ttcgctgaat tcgtcaggtc caacttcgta cataaccgca cccccgattg
      661 cgttaagcct ggaagatgac gcgtacaggc cgcttgcgcc acacaattcg cgacggcggc
      721 ggcttctcat agccgaaggc ttttgcgtgg agaaccctct cgcggagcga gctggaagct
      781 ataccgcggg cttcagcatg gctgcggtgg aagcgtaacc tcgcgccatg ctgtccagga
      841 tttcggcggt gcgcgcgtcg gtcgtcgctt ttgcgaggcg gcggcaccgg gctgcctgct
      901 cgccaagctc ggcagcctgc tcgttggtca tttcgatgat catgttgacc gcgccttcga
      961 gcttgccttg gtcatcgaaa atcggagtcg gatagggccg gcaggcgacg cgctggccgt
     1021 ttggccgctc ggcaatgatg atgtcgttgt ggatttcccg cttttccctg atcgcccgag
     1081 ccatcgggca ttcgtcgtgc ggcagcgggt cgccggatgt cgtgtacagc ttccaggtca
     1141 cgcaccatcg gtcctcgccg gcgcgcggtt cgcggccgac aagcttgacg catgcatcgt
     1201 tccagtaagt gacggcgcca tcggcgtcgg tggtatagat cggcaccgga agctcatcga
     1261 ggacggctcg ccagccctcc gcatccttca gggcggtgag tgcggtgtcg agatactgcc
     1321 tggcaatgcc gctggcgagc atgagctgcg gatgtcctaa cttgggttaa ggccgtcaac
     1381 ggcgccggac tgcatccgtt ccgctcaaac tgcatcaccg cgcagacggc ggcgcggtgt
     1441 gtcgcggctg caacattcgc cagcgttcaa tcgcggtcgc tgaccacctc ggtcgccggg
     1501 tgcggcggcg tttcgccctg gccgtgggcg acatgatcgc ctttcttgac gctttcatgc
     1561 gcattcggat cggtggcccg gcgccgctca gcctgggtcg ccaggtccgc ctgcagatta
     1621 ccgccttctc ggccctgctg gtgcgcgccg ccggcgacgg cttcgtcggc agcggcatcg
     1681 atgatgtcgc tgtcgtcgtt ccgcttcgcc gtttgggcgc ggtcctcgcc tctagtctcg
     1741 gtcattgcaa agtcccttcg cttgcgattc agcgaacggg cgcaacgcgg cggagttcct
     1801 tcagcggagg cgcttgacca gcaggcggcc gtcgggccgg gtcttcacgt cgaaattggg
     1861 gatcgctcga agcaggtccg aaagccgcgt gtagccgtaa ttgcgcgtgg cgaagctgga
     1921 aaccgccttg gcgcgctgcc caagctccga cagggtcgta tagccgtcct cgtcgcgctc
     1981 cgaggccttg taggcatggc cgagcacttc gagcagcgcc tcgtccaccg gccgctcttt
     2041 cacctgcctt tcagtctcgc cctcgacggg ttgctgggcg accagcgcgg cgacgtcgaa
     2101 aaatcgggtg caggcctgcc ggaagctcag cggggtcttg gcggtcccga aaccgtagac
     2161 cggcaggcct tcctcacgga tccgctgcgc aagcggcagg aagtcgctgt ccgaagacat
     2221 gatcccgaag ccgtcgacat tgccccggtc gaggaggtcc atggcatcga tcgtcattcg
     2281 catgtcggtc gcgctcttgc ccttgacgac atcgaactgc tgcatcggaa cgatcgagtg
     2341 gagtccggag aggtcgcccc aacccttgag gctggccttc gcccaattgc cgtaggcgcg
     2401 ccggatgttg atcgtgccga gctcgccgag gacgagaagc acctcgtcaa gatgctcggg
     2461 ggaggcgttg tcggcgtcga tgagcaaggc gatgttcgag tcgagcccgc ttggattacc
     2521 gttactcatg cagcgactcc tgacgattcc tggcctgcat ctaccgcgat gtcgcgcaat
     2581 gaccacagtc tgccgcgcaa agcgtcacga gatgaatggc agatgatcga tgcgggaacg
     2641 aaacgcctgt tcatgcactg ttgcttcatg ggacttccgg agggatccgg ttttgaggag
     2701 tagggtgatg aaaagactgg cactttcggc cgctctcgcg ggcactatcg cgttgaccgg
     2761 ctgtacaacc aatccgtacg gctacaacag cggctacggc tacggctaca attctccata
     2821 ttaccagaac aacggccagc tcggcgacgc agccaccggc gccgcggtcg gtgctgccgg
     2881 cggcgcgatc gccggcgctg tcattccggg cgtcagcacg ggcgagggcg ccatcgccgg
     2941 cgctatcctc ggcggcgttc tcggagcggt caggaacggc cggcaatatt accgcgatac
     3001 ccgcggctat tgctattacg tcgaccagta cggccgtccg cattacgact acaacgtccg
     3061 ctgctagtat ttcctcggac tggtgacggt ccgaacggct ggcttcgcag cctggcgttg
     3121 aaaactgact gtcggcgggt ggaagttcat gcttcccccg ccgacgacga ttcagttcat
     3181 tccgttttcg acacggttcg tggaccgcgg gagcggttac aggaacgaaa cggccgttcg
     3241 ggtgctctgc ctgcggggat tggcttggag gacgtccaga tgaaacatct gctgctatcg
     3301 gccgccgctg catcgagcct ggcgctcggc ggctgcacaa cggcttacga tcgccacgtg
     3361 gcgagcacca ccaccacagg agccgtggtc ggtgccggtg ccggcgcgat tgccggctcc
     3421 gtccttcccg gcataggaac cgcaacgggc gccgttgcgg gcgcggtcct tggtggcgtg
     3481 gttggagctg tcgttgggga ccggcaatat taccgcgaca cgcgcggata ttgctactac
     3541 gtcgatcgct acgggcagcc gcattacgat tataacgtaa agtgttagcc tgaattgctc
     3601 aggcggggcg gaaggttcct tccgcctcgt cgagcacgta caatcggcct tcggaaatag
     3661 aaaaatgggc gccgtggagc ttaaggcgtc cgtctttctc gcgctccgcg atccacggga
     3721 aggtccgcag gttcgagagg ctgagcctga ctgcttccca ttccatttca aggattgcgg
     3781 cgggcccgat ggcatcgtga tgcgagcgca cgcgatcgcg ggcagggtga agcatcgaaa
     3841 cccaattggc gatgaagcgg ccttcgccgg cctgggcgtg gtcgaattga ccggtcagcg
     3901 ccgcgttgca gccgccgcag gacccgtggc caagcaccag cacttcctcg acctccagct
     3961 gagtcacgcc gaactccagg gccgcggaca cgccatgata gcccgccgtg gtctcgaacg
     4021 gtggcgcgag ggcggcaatg ttccggacca cgaaaatctc gccggggcga gtatcgaaaa
     4081 tctgcgctgg atcggtgcgg ctgtcggcgc atgcgatcac catcaccttg ggactctgcc
     4141 cttcggcaag ctccgtccaa cgctcgcgtt cacgcggcca ttccttctcg cgaaagcggc
     4201 ggtatccttc gatcaaccgg gtgaaacgca tggtctgtcc gctataggca cctcgcggga
     4261 ctggcaagcg cgcccgagcg tcgctatctc gcgcccatga acgccccagc agccgtcccg
     4321 ccgaagcagc gcaagcccga ctggatacgg gtaaaggccc cgaccagccc cggctatcac
     4381 gccacgcgcc ggctgatgcg cgacctcaat ctcgccaccg tgtgcgagga agcggcctgc
     4441 ccgaatatcg gcgagtgctg gaccaagaag cacgcgacgg tgatgatcct cggcgacacc
     4501 tgcacgaggg cctgcgcctt ctgcaacgtc aagacgggaa tgccgcgcgc cgtcgatccg
     4561 ctcgagccgg agcatgtcgc cactgccgct gcggagctcg gtcttgagca tatcgtcgtc
     4621 acctctgtgg accgcgatga tctccccgac ggcggagcgt cccagttcgt caaggtgatc
     4681 gaggcgcttc gccggaacac tccgaacacg accatcgaaa tcctgactcc ggatttccgc
     4741 aacaaggcag aaagcgctgt cgacgcgatc gtcgcagccg ggcccgacgt cttcaaccac
     4801 aatctcgaga ccgttccgcg tctctatccg actatccgtc ccggcgcgcg ctattatgct
     4861 tcgctgcggc tcctggagag cgtgaagcgc aaggcgccgc acatcttcac caagtcgggg
     4921 gtgatggtgg gcctgggcga gcagcggctc gaggttcacc aggtgatgga cgacatgcgc
     4981 tcggcggaca tcgatttcct gacaatgggt cagtacctgc aaccgacacc gcgccacgcc
     5041 aaggtggagg agttcgtcac tcccaaggca ttcgaagcct atgcagctat agcccgggcc
     5101 aagggcttcc tgctcgtcgc cgcgtcgccg ctgacgcggt cgagctatca tgccggcgac
     5161 gacttcagga aaatgcagga ggcgagggca gcgcagctgg agcgggcaaa aggctgatgc
     5221 cgcggcacag cgaaacccgg caccttccct acacgcccga gcagctgttc gacatggtgg
     5281 ccgacgtcgc cagctacgac gagttcctgc cgtgggtggt tgcagtccgg atccgctcgt
     5341 cgagcgagac cgagacggtt gctgacctga tcgttggctt cagcgccttc aaggaacgct
     5401 tcacgagccg tgtcgtgaag gagcggcccg atcggatctg cgtcgactat gtcgagggcc
     5461 cgctcaaata tctccacaac gaatggacat tcgagcgcgc cgctgacggc ggcaccaatc
     5521 tccatttctc ggtcgatttc gccttccgct cacggctgtt cgaggccctg gcggggcaga
     5581 tgttcgatcg cgccctcagg cggatgacgg gcgcattcga gcggcgcgcg gcaactctct
     5641 acggaatgag caggtcgagc gcgcaaagcg ccgcctgaag ccgaaccccg gcgcgatcct
     5701 tctcgtcgaa aaacttctgg tccgcgacga tctgcgacgg gtccgcgccg cgctcggcac
     5761 aggcaaagac caccgttccg accggttttg aaggagtgcc tccgccgggc cccgcaatcc
     5821 cggtgatcgc gaccgcgaca tcggcctttg aagctgcaag cgcaccccgg gccatggccc
     5881 aggcggttgc gacgctgacc gcgccgaacg tttcgacgac ttccgcgctg accccgaggt
     5941 cgtcgatctt cgaggcgttc gaataagtga cgtagccggc ctcgaagatt tccgaagacc
     6001 cggggatctc ggtcagggca gcgcagacaa ggccgcccgt gcagctttcg gcaacggcga
     6061 cccggcggcc gagcttgcgg tttgcctcca cgacctgcct ggcgcggtcg tacagcgcct
     6121 gcggaagcag tctctcgctc attgccggcc tcccaggcgg atggtcgcga ccgcttgcgc
     6181 ggcgatgccc tcgcgccggc cggtgaagcc aagcccttcg gtcgtcgttg ccttgatgct
     6241 gacgtgatcc tccctgattc gaaggattgc cgcgaccttc gctctgatcg tcaagcgatg
     6301 cggggccacc ttcggttcct cgcagatgat tgtgcaatcg acatggtcga tcctcccgcc
     6361 gctcttcgcg atcagctccg ctgcgcgggc tgcgaaaagc tccgacggag catcctgcca
     6421 ttgcgagtcc gacggcggga aatgttcgcc gatgtcgccg aatccggccg cacctaggag
     6481 ggcgtcggtg atcgcgtgga ggacgacgtc ggagtcgctg tggccggcaa ggccgcgcgg
     6541 gtgggggatt gcgatcccgc ccatcatgat cggcccctct ccggcgaagg catggacgtc
     6601 aaagccggtt ccggtgcgcg tgaccagccg cgaggcgagc cattgttcgg cgcgctcgaa
     6661 atcggcggga ctggtgatct tttccagcgc agcgtcgccc tcgacggcag cgacttttag
     6721 cccggcggcg cgtgcaacgg tggtctcatc ggttggcgcg gggccgctcc agcgatcgta
     6781 cgcgccgcga agagcggtaa gccggaaggc ctgcggggtc tggacccgca ctacgccatt
     6841 gcggtcgacc gcctgttcta gccggtccga agcgcgggcg agcgtgtcgc ggatctccag
     6901 cacgggcgcc gcgccgtcga agaattccag tggcgcgagc agcctgtcga tcaccggatg
     6961 agggcagaag ggtcgggcgg catcgtggac aagcacggca tcgccttcgg cctcggccaa
     7021 tccggcgcgc accgaatctg cgcgctcggc accgccttcg atcaatgctc cgacatcgag
     7081 tcccgaaagc gcttcgccgg cgagcgcctg ctggccggag ccgacgacga cgcgcaccga
     7141 gccgattgcc ggatggctcg ccagtgcctc gaccgcatgg cgaaccaccg gtttgccgcc
     7201 gagaagccgg tactgcttgg gtattccgcc gccgaggcgc tcgcctttgc cggcagctac
     7261 tatgagggct gtggtcgtca ccgcgcggcg ctgtacggct gcttgccttg tccgccaagg
     7321 gctgttccac tatctcccgc cgacccatga gcatgttgaa gcccatccac atcggtcccg
     7381 tgaggatcga cacgccagtg atcctggcgc cgatgacggg cgtcaccgac ctgccgttcc
     7441 ggcgcgtggt caagcgctac ggcgccggac ttaccgtaag cgagatgatc gccagccagg
     7501 cgatgatccg cgaaacgcgc caatcgctcc agaaatccct gtgggatccc tcggagcagc
     7561 cggtttcgct ccagcttgcc ggctgcgagc cggaggtgat ggcggaggcg gcgaagctca
     7621 acgagcagcg cggagcggcg atcatcgaca tcaacatggg ctgcccggtt cgaaaggtgg
     7681 tcaatggcga cgcgggctct gcgctgatgg cgaacctgcc gcttgccacc aggctcatcg
     7741 aggcgacggt caatgcggtg aaacttccag tcactctgaa gatgcgtatg gggtgggatc
     7801 attccacgct caatgcgccg gagctggcgc ggatcgccga ggacctcggc gtcaagatga
     7861 tcacggtaca cgggcgcacc cgttgccaga tgtacaaggg cagtgccgat tgggccttcg
     7921 tgcgccgggt caaggactcg gtctcggtgc cggtgatcgt caatggcgac atctgctcgg
     7981 tcgaagatgc gcgggaggcg ctcggccagt ccggcgccga tggcgtaatg atcgggcgcg
     8041 gcgcctacgg acgtccctgg cttctggccc aggctattgc cgaattggtg acagagagcg
     8101 cctgggccga accgtcgctg gatgagcaac tatctacgat gcttgcccaa tatgacgaga
     8161 tgctgtcgct ctacgggcgc cagaccggcg tcaacctcgc ccgaaagcat atcggctggt
     8221 acaccaaggg gctgccgggc tccgcagagc ttcgcaacac cgtgaaccag caggacgatc
     8281 cagccgttgt ggtggcgatg cttcgcgaat tctatggacc gtggctaacg cgcgccgcgg
     8341 cctagccgct cttttcggga ggtcgacgtg accgcgtacc tgaaactcct cgcaacttcc
     8401 tcgctcttgg ccgcacttgc cggccccgca gcctcgcagg ctccggtgct cgatccggtt
     8461 tcgatgcgtc tcctggccgc ccacaaccgc gagcgagccg ctgtcggagc gcctccaatg
     8521 gcctgggatc cggcgcttgc tgcggccgcg gcgtcctatg ggccgtcgct agccgctatc
     8581 ggccgtctcc agcactcgcc caagcagttg cgccccggcc agagggaaaa tctgtggatg
     8641 gggacgactg gcgcctattc gccagagcaa atggtgtcga actggtccgc ggaaaagcga
     8701 atgttccggc ccggaatatt tccggcggtg agctcgaccg gtaactggct cgacgttgcc
     8761 cattatacga cgatgatctg gagaacgacg acgcgggttg gctgcgcgat ccaccggacg
     8821 gcggcgtggg aatatctcat ttgccgctat tcgccgcccg gcaacatcga cggagtgccg
     8881 gtgccgtaaa aactgcagct agccatcggt gcccgcggcg cgctaactcg ctgcgtcgcg
     8941 cccgggggac ctgatgagca taccgaagct gctttcgcgc ctgcgcatcc cggtcatcgg
     9001 cgcgcctttg ttcatcatat ccaacccgaa gctggtgatc gcgcaatgca ccgcgggcat
     9061 cgtcggcagc ttcccggcgc tgaacgcccg gccggcttcg cagctcgacg aatggctcca
     9121 cgagattacc gaagcgctcg ccgctcacga tcgcgagcat cccgaccggc ccgccgcgcc
     9181 gttcgccgtc aaccagatcg tccaccgttc gaacgaccgc ttcgaagcgg atatggcggt
     9241 gtgcgaaaag tggaaggtgc cgattgtcat cacgtcgctc ggagcgcgcg aggacctcaa
     9301 ccaggctgtc cacggctggg gaggggttac acttcacgac atcatcgacg atttctttgc
     9361 gagaaaggct gtggccaaag gagctgacgg gctgatcgca gtggcagccg gggcgggggg
     9421 ccatgcaggc cgctggtcgc cgttcgcctt gattcaggaa atccgcgcct ggttcgacgg
     9481 gccgctggtg ctttcaggat cgatcgcgac aggctcggca gtgctcgcgg cgcaagcggc
     9541 cggcgcggac atcgcctata tcggctctcc gttcatcgcc actcccgagg cgcgctgttc
     9601 cgaggattac cggcaggcga tcgtcgccgg cggggctgcg gacatcgtca acagcgcgct
     9661 cttcaccggg atcgccggca attacctgcg ctcgtcgatc gagcgcgctg gtctcgaccc
     9721 cgactcgctc gacaagctcg actcggtcgc gaccgagttc gggtcggaag ggtccagccg
     9781 gaccaaggcg tggcgcgaca tctggggatc ggggcagggc atcggggcga tcgataaggt
     9841 gcagccggcg gcagactata tcgcagtgct cgagcgtgag tatgccgacg cccgagaacg
     9901 cctgtgcggc gctactggcc ggtaagtccg cgttccaggc ggcccatcag cgcacgcgcc
     9961 gggcttgtcg tcggctcgtc ggcgacgctg ccctcgtcga gccgtttcac gcgagcgtaa
    10021 agatcggagc ttgcgctgac gaggcgctgt gccgcttccg ggagccgggc gaccactgcc
    10081 ggatcgctct cctgcgcatt gccgaggcgc cgctccgggc gccgtccttc tcgataggcg
    10141 atctcgccgc tctctatcgc acgctgggtt agcagccacg cgacgatatg catgatccgg
    10201 gtcgtcacct tcagcgactc acaggcaaag ttcactcgaa cgaacgggtc gagagtgctg
    10261 cgctcctccc ggccggcatc gtcgaaatag gagcgcgcct cgtcggcgag cagcatcgct
    10321 tccgtataaa aggaatcgac cagccgcgga gtgatccggg cttccggctc gggcgcttcg
    10381 ttcgagtcgt gcatgaccat cagattgcca ctttccattg ccggagaaaa cgcgaaacgg
    10441 cggggcgatg tgccgcttga ccgcgctttt gtcccgaagc gggacgtggc tcgatctatc
    10501 gattgcgcga caggatgccc gcgccggcgg ccaggcggtt gttacaaatg cgagacaagc
    10561 gcggagaaaa gtgttttatt ggcgacgttg tcattcgttc acgaaaggaa ttggcaccga
    10621 tggacaaggc acaggccgag gctctcgcat ccaagcacgc agcgctccac gcgatgatcg
    10681 accaagagga gcatcggccg catccgaacg aagatcttct ccatcaactc aagaaagaaa
    10741 agctccgcct gaaggacgag ctggccggcc attacgagca ttagctcgtc gcccaggcga
    10801 cggcacccag ttgtcgcgta tcgcgatttg gactgagccc ccggctcagt cgtctcgcga
    10861 tatcttctcg attctctcgt gacgctcctg cgcctcgacg gtcatggtag cgatcgggcg
    10921 cgcttccagc cgggccagcg agatcggatc gccggtcact tcgcaatagc catattcgcc
    10981 ttcgtagagg cggcggatcg cgcaatcgat cttgcaaatc agcttgcgct ggcgatcgcg
    11041 ggtacgaagc tcgatcgacc agtccgtctc gctcgacgcg cgatcggcga tgtccggctc
    11101 gcgcagcgaa tcgacctgca gctgcgccat cgtctggcgc gactcctcga tgatcgcctc
    11161 tttccattcc ctcagcttct tgaggaaata ggcgcgatgg atatcggaca tgaactcttc
    11221 gtcttcggac gggcaatagc cctccggaac gatgatccgg tcaaacggaa ccggttgttc
    11281 gttgaagaaa tcgactagag cagtcgccat tagaacccct cccactcaac tccgccgggc
    11341 acttggcccg atggaagctc cctgcacgcc ccgccatcgc ttctgcgacc ggagccaccg
    11401 gtgcagccgg aggcggattc aacaagactt tcccgggggt taacaccggg tcagtcggta
    11461 atcccccgac cgcgcctata aataagcgta ccgtcgttaa caagcgctga cggaaacaac
    11521 ccacagaaat gcgcaagctg ttgctcatat ggcgctattt tcctggtgcc agcgacgttg
    11581 gacagcacca ccgcggtcgt tatgagcaag cgcaatgcgc atcctcctga ccaacgacga
    11641 cggaatcaac gcccgcgggc tcgatctcct cgagaccgtc gcgcagacct tctccgacga
    11701 catctgggtc gttgccccga ccgaggagca gtccggcgcc ggccactcgc tgacgctcac
    11761 ccagccgatc cggttgcgga agcacgacaa caggcgcttt tcggtaaccg ggaccccgac
    11821 cgatgcggtg atgctcgcgc tcgctcacgt catgaaggat tcgccgccgg ccctgatcct
    11881 gtccgggatc aatcgcggcg ccaatctcgg cgaggacgtt acttattcgg ggaccgtgtc
    11941 cgcggcgatg gaaggcgcgc ttgccggagt ccgctctatc gcgctcagcc aaagctattc
    12001 gcgggaaggg atgggcgacc tggtgccgtt cgccgcggcg gaagcatggg ccgaacgcgc
    12061 cctgcggccg ctcatcgact acgagccgcc gccggggacc ctgatcaacg tgaactttcc
    12121 tgcgcttccg cccgacaaga tcaacgggat acggatttgc cgtcagggca tccgggacta
    12181 tggccggctt cgcatcgaca agcggaccga ccctcgcggt tacgactatt actggttcgg
    12241 cctcggtccg atggtgcaga caccgggaca tttgaccgac ctcgaggcga tggacgacgg
    12301 ctatgtcagc gtcactccgc tccacctcga ccttacccac gatccgtcgc tggaagtgct
    12361 gcgggagaga ttcgcgtgaa gcctcccaac aaccgtaact ttttccgcgt atcggcgttg
    12421 tgactgcagc taccggtttt cggggaacca ccctgcagtt gcgaccttat cttgctgcgc
    12481 tcggattcgt cgcaattgcg gctgtcgttc ggctcgttct cgatcccttc ctcggggacc
    12541 gggcgccatt cctgctgttc ctgctcgcag tcctgatttc ggcggctcgt ttcgggttgt
    12601 ggcccggcct cgcagcagcg gtcgtgagtg gattcctttc ggtgttcctg ttcgtgcaac
    12661 cgaagttcgc tttccttccg ctggccggcg acgacctgtc gaacatcatc gcctttacgg
    12721 tcatcaccac ggcggtgttg ctgttcgttg cgcggatcgg ccggcttcag tccgatgttg
    12781 cccgccgaga agcgaaagtt gaactcgacg tccgcgaaca gcgcctcgtc gacgccgcac
    12841 aggactatgc aatttacgag ctcgaccgcg aagggcggat actgacctgg aacaagggcg
    12901 ccgaacggct gaagggttgg aaggccgacg aaatcatcgg caagccctac aacatcctgc
    12961 acacgccgga gagccgggcc aagagtgcgc ccggccgcga actcaagatc gccgcccaga
    13021 ccggaaggtt cgaggaagaa gcgccgagga tgcgcaagga cgggacgatc ttcgccgccc
    13081 acgtgagcct tttcccgctt cgcgatgaca acggcgaagt caccggtttc gtcaaggtca
    13141 ctcgcgacat cagcaatcga agcaaggcgg gcagggcgat cctcgagact cgtcggagga
    13201 tggaagccat cgtccagtcg gcgatggacg caatcatcac ttttgacgag gagttgagga
    13261 tcgtcctctt caatccggcg gcgcagcgca tcttcggtta ttccgaagat gaaattctcg
    13321 ggaaacagct agaaatcctc ttccctgagc ggatggccga caagcagcgg caaaactttc
    13381 gagtcttctt caaggggggc gaggccaatc gccggttcga cggccccgat gtgctcgtcg
    13441 cggttcgaaa aacgggcgag gaatttccga tcgaagcgtc gatgtcgcaa gtcactgtcg
    13501 acggagagag ggtcggaacc gtcatccttc gcgacattac cgagcgcaag accaatgagg
    13561 aggcgcgggc actgctagcg cgtgaagtcg accaccgtgc caagaacgcg ctggccgtcg
    13621 cccaagcgct ggtcgggttg accaaggccg acacggtcga ggactttgcc gatgccatcc
    13681 gcggacggat agcgtcgctg gcccgagcgc attcgctgct gtcgcaatcg cagtggcgcg
    13741 gcgcttcgct cgagcagctg atccgcgacg aactcctgcc ctacgcgaaa gaagggcagc
    13801 tgttgctgaa cggccagaac gtcaattgcg gcgccgaggc cgtccaatcg ctgagcctgc
    13861 tgttccacga gcttgccacg aatgcggtga aacatggcgc cttgagcagc cgcaatgggc
    13921 atgtgacgat cgaatggcgg cttgaaaacg aatggatgcg gatctcctgg aaggagcagg
    13981 gcggcccgcc cgtggtcgcg ccgaagcgcg aggggttcgg gaccaagctc ctgaaccagg
    14041 tcagcggccg acagcttaac gcccggttgg acttcgactg gagggcggac ggactgcagg
    14101 taaagatcaa gctgcccgcc gatttgttca cgaccggtga aattagcgga gcccccgacg
    14161 aagttggcga tgatttgggt ggagtcgtgg cgaacggcaa ggagcggcga atcctggtgg
    14221 tcgaagacga ggagcttgtc gctctcgagc ttagcgcgga attgaccagg ctgggctggg
    14281 caatcgttgg gccagccgcc accttaagcg aggcacaatc cctgctctcc aagccgttcg
    14341 atgccgcggt tctcgacgtc aacttgcgcg ggcgctcggt ctatcccgtt gccgaggcgc
    14401 tgaaggagcg gcacgtaccg ttcgttttct gcacgggtta cgagatggtg gatccggagg
    14461 gtcgattccc gacggtgccg atcatccgca agcccgcaca accggccgcg atcagcgccg
    14521 ccttggccga cctgctgaaa gcgcgagcgc attaaggaaa ccggggtcag gagatgcgtt
    14581 gccgaagctc cgagagctcc caataatcat ttcggctgaa gggcagcagc gtcttcaacg
    14641 cagcgaagct gcttttgccc agcgagcgct tgagccattc gagctcggcc aaagcctctc
    14701 gaatagccct ctcatcgaaa acggcgtccc cctccgcttc ttcgaccatc gtttcttccg
    14761 cttgcgcgac gagccatgtc tgaagttccc agtatcgccg gattctttca gccgactccg
    14821 gatcgaggcg ttcggcgagc gctgcgatct tgcggcccgc cggcgtgtcg ggccaggcgc
    14881 ccgaccgcaa ggttgccagc tgctcctcat gggcggcacg ctcggcgact agccagcgct
    14941 ccgcttccgc ggccccgaag tggaagatcg cgatgatcgc gagcggcgcg aacagcacgg
    15001 cgcccatcat cgcaatgatt gggcgatcgg ggaattggtt gaatgccgtg tgcaaggcga
    15061 ctgcgatccc atagccgggc aggaaccaca gcagggtgaa atcgaattca cccgctgctt
    15121 cgcgcgtttc gcgctcagcc aattcatgcg cgatggctgc gagcaccgcc atggtcgctc
    15181 cgtgcatgac tgcggttccg aggccgcgga cgagccaggt gccggttcca tattcggggt
    15241 agacggtcag gtagagaatg ttctcgacga cggagaatcc ggcgccgacc gcgaatccgg
    15301 aaatgaccgc gtcgagcttg tagccaattc ggttgaacca gaagaggccg accatgatgg
    15361 cgcctttgat cgcttcttcg atccagggcg caacgaaacg gctgtagaag gaaaatccga
    15421 tcggcaatgc gtcgataagc cggccgctga ccgggtaggc ggcaaacgca ccgaacccgc
    15481 cgagcacgag caggatgaga acctcgtgca aactcattag cttgaaggca tcgagccaca
    15541 cgaagactgc cagcagcacc agcaccggca ccagcgcgaa cccccaatgg agcgattcgg
    15601 ctattagctc gccggtcaca ggatcttgag tgaaacgagc cactccgttg cccggtagtg
    15661 gccgtcttcg aacccggccg ctgcgccgac cgaaaggacc atcggcaagc gcagggcgat
    15721 cgtgaagttg aggtcgagct gcgctccgac atcatagaag cggcgaccgc cgtcggcggt
    15781 atcggttgcc attgcgccgg cgaacaccgc cgggcgcaaa ctgctgagat agaagagagg
    15841 tgtgcccact tcggcgaagc ggatcggagg caggttcacc tcgcccgtcg ctttgacgaa
    15901 gctgcgagcg ttgatctcgt ctatgtcgaa gcccggaaag ctctccatct cccggtatct
    15961 cttgaccggg cgattatcga catagttgtt gcggaacgcg ccgaagtaga aattcgaaag
    16021 cgggctttgc tcggttcccc acccctttcc ggcgtggagg tagatccatg ccgagctgtt
    16081 cgagatcggg agcggaacgc cgtaatccag gccggcagct attttcggga agacgtgacc
    16141 gacggcgtaa tcggcgcccg cgctggcccg ccaggcaaag cccttctcgc ggtccacagc
    16201 gcccagcgag cttcgaatgt tgcggtactt aacccccgct tcggctgaaa agatgttgga
    16261 ggggctttcg atattctgtg cgcccggcag tcgctcgagg ccgagaaaca cagccgcggt
    16321 gccgtaaaga tcgagctggc gaggcggatc gtaaaccttg gtgtggttgt aggaggcgat
    16381 gaaggcgtcg cccttccggc ttcgttcgac cggcccgaag agatcgtaga agtcggcgcc
    16441 attgtgcacg tagcgcaggc tccatttcat cgtcttatat tccagcgagg cgtggaaacg
    16501 ctcgctgtcg cgccgctccc cgaatggcga cacggcaact gtcgcggtca gctggttgaa
    16561 ctgcatcgga tcttcccagt gaaagaggta tccgagcgcg ggcgagccct tgtagcccat
    16621 gataatcggg tagccggggc cgaaagccat ccgcttgcct gcaatatagt ggccgcgctc
    16681 ggtgaccagg tcgtcgagag ggaccttggc cggcgagccc actccccatt ccttcaacac
    16741 gggatgggca ttgaccaccc gcgtccctag cagctcgacg tttgcgagat cttcctgctt
    16801 ctggggaacg atgctgacgg gccgcattcc ctggccgctg aattcctgga cgatgagcga
    16861 gccgtcgggc tgcagctggg gcctgaagaa tccggtcgag gcgttgctga cgatctcgaa
    16921 ctgctgcgtt gcgatgtcga accggacgat gttcgacacg ccggtgtaat aggcgctccc
    16981 gtaaaggctc ttgctgtcgg gcgagaaggt gaatccttcc gggacagcgg gaggaagctc
    17041 cagcctcgcg acctcctccg ggccgctgcc cgattcgagc agctcgcggt tccagatccg
    17101 gaccgactgc ttgccgtcga cctcgccgac cgacgccgac accatcgtcc cgtccggaga
    17161 tacatcgagg tcgaaaacgg tcgtgccgta gtcgaaggtg tggatctgat tgaaccccga
    17221 gtagggcggc ggaatccgga cgatcgtggc aaagccgttc acgtgacgga ttccccacag
    17281 cgacttgtcc gctgagttga ggacgagttc gccgatccgc gcatcgcgtt gcagcatccg
    17341 ccgcttgccg ctgtcgacgt cgacttcgac gatgtcccgg aacgcgtaat tgtcctcggt
    17401 gaagtatgcc ttccgagcgt cgggatcgaa cgcgatgctg gtcacgctgt agagcgccat
    17461 gcccttgatg tccgacaggc gccgcagctt gccggtcgcc atgtcgagtg ttcccacgaa
    17521 gccgatcgtg cccgggtaat agaaggcgcc gacaagctgg ttcctggccg aatcgacata
    17581 ggtgcgcgac atcgatccca ggccgcgcgg cgacagaggc cgggtttcgg tcagcgggta
    17641 tgccgcgagc ttggcgagat tcgatttctg gaaatcctgt tcgaaggcga tccagtcgtc
    17701 ccatacctgg ttcaggcgct tgccgaacac ctgcttgaac cgcgaggcgt agaatccggc
    17761 gctgccgtcg ggccgcttga gccagtcgat cggcttgtcg ggaccgtagg tcagcgccag
    17821 gtaggaaaag aagcgggtgc cgtagaggta attgttcacg ccgacctgga agtcgaccga
    17881 agtgccttcc gattccaggc cgagcggcga gtagaatttg tcgccgtccc ggacctttgc
    17941 ccggaaaacc atctcgtcat aggcgccctg cgcccgtccc agcccgccgg ccatccaagt
    18001 ctcgaggaag acagcgctgc cttcggcgta ccagcgggga atattgttcc gcggaaccgt
    18061 caggtaattg tagaggatcg agatcgggtg gtcctggctc ggcgacggct tgccgtggaa
    18121 gaatttgcgc cagcgggcgt cggacttgtt ccagatatcg gtcgtcgcga cgtgcgcgag
    18181 ctcgtggttg atgagcgtga agaagcgctc gcccggagta aaggtctcca tcgtctggcc
    18241 aagcggtgcg acgtcgagca ggaccgcatt gctgggcgac gagcgagcgc ctgcattacc
    18301 gtaatcgccg aagtccttga gaagcaaagt ggtccggtcc cacggttccc aatcgaacat
    18361 cttgcgatga tattggaagg cgttctcgaa ggctttgccg acatagggcg tcaaataggt
    18421 ctggaccggg tcgaagtaga gtatcgagac attgcgggtc tcgagcgtcg aaagatccag
    18481 cccagatgca tccttcgggg aatgtttcag ctcttgcggc gcttcctctt ctggaggcgg
    18541 ggcgggcggc tccgccgccg gcggctcggg ctcgggcggc ggtggatcga cgatcgccgt
    18601 cggattttca tccggcggcg gcggatcggg tacttgctgt gcgagggccg gctgtgaggc
    18661 tgcgctcaca agcagggcgc cggtcaggct gatatgcgtt cgcctgatcc ggcgccccat
    18721 tattgtgccg ccccccttcg gcccgactta ctgtcgggct atcgcctggg cgaaggcagg
    18781 gctctgcgcc agagccgcga agttcggatt ggcggcaagc gccccgaact gcggattgcg
    18841 cccgagcgcc tggaacgcac cggcgttgcg cgagaacgcc gcgagcgcct gcggctgctg
    18901 ggcaagcgcc tggaacgcag ccgggttggc gctgatcgcc gagaacgccg ccgggttacg
    18961 cgacagcgcc tggaacgcgg ccatgtcgcc ccgcgccgcc atgctggctg ctatcgactg
    19021 ggcctggaac gcttcggcgg atcgcaccgc ggcggagaaa gccgccgggt tacgagcgag
    19081 tgccccgaaa gcggccgggt tctttgcaat cgcctgcagc gcgtcggaac gcattgcagc
    19141 ctggaaggca gccgggttct tcgccagtgc ctggaacgct ccggcattgc gggcgagcgc
    19201 ttcgaaggcg cccgggttgc gcgacagcgc ctgcattgcc gccgcatccc gcgacagcgc
    19261 ctggaacgcc gcggcatcac gcgacatcgc cccattggct gaaggattgc ggaccgccgc
    19321 ctcgaacgct ccggcatttt tcgcgaatgc gccgaacgtc tgcgggttgc gcgccattgc
    19381 cgcaagtgcc tcggggtgac gcgaaagggc cgcgaaggca gctggttggc tggcgatcgc
    19441 ttgcaatgca gccggctggc tggccagtgc accgaacgcg ccggcgttac gggccagcgc
    19501 ctccattgcc attgcgttca tcatgttggc gctgcgcagc tgggcaccga aggtgtctgc
    19561 ctgacgagcc gcggcggcaa gcgccgacgg gttcttggcg agtgcctgga acgcctctgc
    19621 attgcgcgac agggcctcga acgcggcggg gttcttggcc agcgcctgca tcgccccagc
    19681 gtcgcgcgaa agcgcttcga aagctgcagc attacgcgac attgcttcca ttgaagctgg
    19741 gttcttggcc gcagctgcga acgcagccgg atcgcgcgag aacgccgcga acgccgcggg
    19801 attctgcgac attgccgcaa aggcttccgg atgacgcgac aaagcggaga aggcgtcgcg
    19861 atgttgcgcc attgcgacga tgctgcgcgc ggacagcgaa tcgattccgc gtgcggcggc
    19921 cgcgtgctgg accatcgcct ggaaggcctt cgggtcgcgc gccagggctt cgaacgcctt
    19981 gggattggcg gcaagcgcgg ccatcgcctc ggggttcttc gccaatgccg cgaatcccgg
    20041 atcgctcgcc agggcccgga agctcgggtc cttcaccatc aattcgaacg cgtctgtctg
    20101 catcaattcg gcaaccgacg tgtcacccag cgttacgtcg gcctcgccga cctgcgcgga
    20161 ctggtacctc tccgacggtg caatggtgcc ggcggtcgtc ccgagcggag gataaaccct
    20221 cccaagcccg tacgctgcgc ctgcgacgag aacgatcgca gcaccagata tcatcaattt
    20281 acgattgttg gccgtggtcc cggtcatggc tcaactcccc tgttggttaa ccggaattgg
    20341 ttaaccgagc aggcgtacca tcagccaagc tggagtcaat aagtcgtcgc ttcgaactgt
    20401 cgcaagacga tacataggga agaagtaaaa ggcggcactt ctgcttactg gacgggggtc
    20461 cgcagtgcga cacggtcaga gcattggatt cattgactct cgttgaccga atcaagcgac
    20521 gaaacatccc aagcaagagt gtaagctttg cttgcccgga acagcatgta agcctggagc
    20581 acttgcagca ggttaagaac agggtttgta tagatttacg ccaactcgcc cctaaagtcg
    20641 gcactccgcg ggcgaatcgc cccgggggag gcggggcaag gcgatgagtt tgcaggatcc
    20701 tgagtcactg cgtctctggc cgcatcggca actggcgatc gcgggagctt cgctgcttgt
    20761 tgcctttgcc tcgccagtcg ctgcgcaaac tcctccgcaa acgctgccgc cgacccgcga
    20821 agaggtcacg cgtcccgagt cgcagcctcc gcaggaccgc cgattgagaa tcgatgtgga
    20881 gggcggactc gagcgcgcgc cctgcgccct cgacaagccg gagttcggcg acatccggtt
    20941 caccctccgc ggagtcgagt tcgacgggct ggagggactg gaacccgatg cgctggaaag
    21001 ctccttcgcg ccgctagtcg gggcggagca gcccatttcg gtcgtctgcg cgattcgaga
    21061 ccgcgctttg gcgatacttc gcgacggcgg gttcattgcg tcgatcgaag tgcccgagca
    21121 acggatgtct gacggggtca tccggttcaa agtcctgctt gcgcggctga cccaggtccg
    21181 agtgcgcggc aatgccggcg gcgccgagca gatcatcgct ggctacctta accaattgac
    21241 caggcagccg gtgttcaacc gcaacgacgc cgaacgttac ctgctgctgg caagcgacct
    21301 tcccggctac acagttcgcc tgaccctccg gccagcgggc gagaaacccg gtgacgtgat
    21361 cggcgacgtg accgttgagc ggatgcctgc ctatgccgac ctgacggtac agaatggcgg
    21421 gtcgagggcg cttggccgct ggggagc
//
LOCUS       DATAKH010000233         3138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_34212,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000233 DATAKH010000000
VERSION     DATAKH010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34212"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1626)
                     /locus_tag="VHN55_10040"
     CDS             complement(<1..1626)
                     /locus_tag="VHN55_10040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804302.1"
                     /translation="MANARGLIGAALLAGSALALAAPALALQSSGSVRLNEIMSEAVA
                     ANANAAAAATRCDGAAIDAAKATLARLEAESSRLARDAKNAAKLGIGAVDPAVADGVY
                     QNVKGLHAQVASYTLQNCPQPTQQQPAVQTPPAPQVTPAQGVTQDGATAIRDQQFRVD
                     AIEDILSQAEAGKAKGECIDYVHIETGGMPIGLMWVRAVLSNIADGTSTVQYPPDLVD
                     SWKRRMALLDEYQRARKDCPLTPQQQPRQVGMTPKITGAFEVARAGPPQAGTGVVSQV
                     SGGGETFAGLTPRHLTKYGASARLEFPLSGMGGFRLSGSYMGGSARRTFDMAPSSEMD
                     FGFVYSDFSPNGSTGIIQPFFGLNGSMQVKMRQARAELCWILDMFGEEMSDDEYYGKL
                     KQLDFYGGPCASWEYNRITYDLQSRFSGDLGGNMYEAEQLRHQTIKNNMYGFGGVVGT
                     RVPLGGALGTKLEVGAQMYRLKTTLDSLEHNSNNFTGGPDADFTIDIRDSNSRWGWHP
                     HVDFALDVDLSPQTRLTVGTRYDHWSKIGGVYNP"
     gene            1779..2645
                     /locus_tag="VHN55_10045"
     CDS             1779..2645
                     /locus_tag="VHN55_10045"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX2804303.1"
                     /translation="MDNEVHRFGKVEFVPGKRRLSVDGRGIDLDRPAASILSLLLHEN
                     ESDVEKNRLLDAGWPGRVVDENSLAKAICRLRTALGEDGAALETVHGYGYRISAGVVT
                     EQLTAGPARPFRATALGVAVSCVAAAFLAAGAWQASQSAGEDAAPRVINGEAADSVGR
                     ILWVDDHPENNVAERRFLEQHKIGVYEVATTDDALKLLEMYAYGAVVSDMGRNDNPLA
                     GIDLLEAMRERGDNRPFILYTVHSSKAQRKLLADSGGQVVADDPRELYEALFPLFGSR
                     LATSRVDHLTHQ"
     gene            complement(2716..2789)
                     /locus_tag="VHN55_10050"
     tRNA            complement(2716..2789)
                     /locus_tag="VHN55_10050"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2755..2757),aa:Gly,seq:ccc)
     gene            complement(2851..>3138)
                     /locus_tag="VHN55_10055"
     CDS             complement(2851..>3138)
                     /locus_tag="VHN55_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEX2804304.1"
                     /translation="AKAMLEALDGKLEGGRSMVSVTVRANAAESDVAELLKQVQDEHS
                     GVSIGSYPFYREGGYGADFVVRCEDEGVANACADDLRERLAEAGVEVAPEA"
BASE COUNT          553 a         1014 c          927 g          644 t
ORIGIN      
        1 tggattgtag accccaccga ttttcgacca atgatcgtag cgggtaccca ccgtcagccg
       61 cgtctgcggg ctgagatcga catctagcgc aaagtcgacg tgcgggtgcc agccccaacg
      121 gctgttgctg tcgcggatat cgatcgtgaa atcggcatcc ggcccgccgg tgaaattgtt
      181 gctgttgtgc tcgagcgaat ccagcgtcgt tttcagccgg tacatctgag cgccgacctc
      241 gagcttcgtt ccaagagcgc cgccaagcgg cacccgagtg ccgacgactc cgccaaagcc
      301 gtacatgttg ttcttgatcg tctgatgtcg cagttgctcc gcctcgtaca tgttgccgcc
      361 aaggtcgccg ctgaagcggg attgaaggtc gtaagtgatg cggttgtatt cccaggaggc
      421 acacggtccg ccgtagaaat cgagctgctt cagctttcca taatattcgt cgtcggacat
      481 ctcttcgccg aacatgtcga ggatccagca cagctccgcc cgggcctgac gcatcttcac
      541 ctgcatgctt ccgttaagtc cgaaaaatgg ctggatgatc ccggtgctgc cgttcggaga
      601 gaagtcgctg tagacgaacc cgaaatccat ctccgacgag ggcgccatgt caaaagtcct
      661 tctcgccgag cctcccatgt agctgccgct gaggcggaag ccgcccatcc ctgacagcgg
      721 gaattcgagt cgtgccgacg cgccatattt ggtcagatgc cgcggcgtca ggccggcgaa
      781 tgtctcgcct ccaccgctga cctggctcac gactccagtg cccgcctgcg gcggaccagc
      841 acgcgcgact tcgaaagcgc cggtgatctt cggcgtcatt cccacctgtc gcggctgttg
      901 ttgcggagtt aatgggcagt ccttcctcgc tcgctgatat tcgtcgagca gcgccatgcg
      961 gcgtttccag ctatcgacca ggtcaggcgg atattggacc gtgctcgtgc catcggcgat
     1021 gttgctgaga acagccctta cccacatcag gccgatgggc atgccaccag tctcgatgtg
     1081 gacgtagtcg atgcactcgc cttttgcctt gccggcctcc gcctggctca ggatgtcttc
     1141 gatcgcgtcg accctgaact gctggtccct gatggccgtc gccccgtcct gtgtcacacc
     1201 ttgcgccggc gtgacctgcg gtgcaggcgg cgtttgcacc gccggttgct gctgtgtcgg
     1261 ctgcggacaa ttctgcaacg tataactcgc cacttgcgcg tgcaggccct tgacgttctg
     1321 atagactccg tcggcaactg ccggatcgac cgcgccgatg ccgagctttg cggcattttt
     1381 tgcgtcgcgg gcgaggcgcg agctttcggc ctcgagccgc gcgagcgtag ctttggcagc
     1441 gtcgatcgcg gctccatcgc agcgcgtggc cgccgcagcg gcattggcgt tggccgccac
     1501 cgcctcggac ataatctcgt tcagccgcac gcttccggac gattgcagag ccaatgccgg
     1561 cgctgctagc gccagcgcgg atccagcgag cagagctgcg ccgatcaatc cccgtgcatt
     1621 cgccatgtta cgctccccca tgaatggaca ctcgattttg ctttgctcag ccagccgcag
     1681 tctttccgca tttctgaaaa ttcctgaatg tcgcaccgtc agcggaaatt gacgcggcct
     1741 tcggaacggc agtaaattcg ccggcctggg ggtgccgcat ggacaatgaa gttcatcggt
     1801 ttgggaaagt agagttcgtt cccggcaagc gccgactgtc ggtagacggc cgcggcattg
     1861 accttgaccg tcctgccgca tccattctct cgctattgct tcacgaaaac gagtccgacg
     1921 tagagaagaa ccgattgctc gacgcaggct ggccaggccg cgtcgttgac gaaaactcac
     1981 tcgccaaggc gatctgtcga cttcgaacgg cgcttggaga ggacggcgcc gcgctggaga
     2041 ctgttcatgg ctatggctat cgaatctccg ccggagtggt cacggagcag ttaacagcgg
     2101 ggccggcgcg gccgtttcgc gcaacggcgc tcggcgttgc cgttagctgc gttgccgcgg
     2161 ccttccttgc ggccggtgcc tggcaggcaa gccaatccgc cggcgaggac gcggcaccgc
     2221 gcgtcatcaa cggcgaagcc gcagactcgg tcggccgcat cctgtgggtc gacgaccatc
     2281 cagaaaacaa cgtcgccgag cgccgcttcc tcgagcagca taagatcgga gtctatgaag
     2341 tcgcgaccac cgacgacgcg ctcaagctgc tggaaatgta cgcttatggc gctgtcgtct
     2401 cagacatggg ccgcaacgac aatcccctcg cggggatcga tctgctcgag gcgatgcggg
     2461 agcgcggcga caaccgcccc ttcattctct acaccgtcca cagttcgaaa gcgcagcgga
     2521 agcttctcgc cgattccggc gggcaggtgg tcgcggacga tccgcgcgag ctatacgaag
     2581 ccctttttcc actatttgga agtcggctgg cgacgagtcg agttgatcac cttacgcatc
     2641 aatgatgcgc cgcgccgctc gcttcgtcgg ctctcgtgcg ccccgaatct gcgacatgcc
     2701 ttggcatgtc gaatttggag cgggtagcgg gaatcgaacc cgcgcgttca gcttgggaag
     2761 ctgacaggct accattacat catacccgcg tggcgatgct ggagttaagt gctcctccgc
     2821 ttagggtcaa cgagctctct tgaagttgaa ctacgcttcc ggcgcgactt cgactccggc
     2881 ttcggcaagc cgctcgcgaa ggtcatccgc gcacgcattc gccacccctt catcctcgca
     2941 gcgcactacg aagtcggcgc cgtatccgcc ttcgcgatag aatggatagc ttccgatcga
     3001 gacccccgaa tgctcatcct gaacctgctt gagcagctcg gcgacatcgc tttcggctgc
     3061 attcgcgcgc accgtcaccg acaccatcga gcggccgcct tcgagcttcc cgtcgagcgc
     3121 ctccagcatt gccttggc
//
LOCUS       DATAKH010000234         3838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_30360,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000234 DATAKH010000000
VERSION     DATAKH010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3838
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30360"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..773
                     /locus_tag="VHN55_10060"
     CDS             87..773
                     /locus_tag="VHN55_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HEX2804305.1"
                     /translation="MAPVASWLSGPVFSRARDIFAANMTELLDRAEDPARMIRMIILE
                     MEETLVEVRATAARSIADMKEMRRSLGRLEEIQASWTEKAELALSKGRDDLAKAALME
                     RQKAAEMAEGLAAEMAQIQDVLRGYEADIARLQSKLREARARQNAIQHRLESAVTRAK
                     ARELLNGSRTEDAFSKFEVLERRADFAEGRAEALGISPLEDEIDQLRANEKIDAELEA
                     MKAALAAKKN"
     gene            789..1181
                     /locus_tag="VHN55_10065"
     CDS             789..1181
                     /locus_tag="VHN55_10065"
                     /inference="COORDINATES: protein motif:HMM:NF015957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HEX2804306.1"
                     /translation="MARKTYRYSLNRRDAKLLGVCSKLGDRFGIDPTFLRIGAVAFAL
                     MVEFQIAVIAYVALGIYFAVKQKQQARRDDRSDFERMDFATSIRPSVHAMRTELDPID
                     RRLMAIENEISKPNEELAREIEALREEK"
     gene            1181..1411
                     /locus_tag="VHN55_10070"
     CDS             1181..1411
                     /locus_tag="VHN55_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014077924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804307.1"
                     /translation="MEPLSIGLIAATVLVAIGTAALAGLKGWNAWLELKRMELTHTLA
                     DHGLPPAGNRIELADLKERVRKLEAIAAGIDI"
     gene            complement(1492..3645)
                     /locus_tag="VHN55_10075"
     CDS             complement(1492..3645)
                     /locus_tag="VHN55_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020817902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2804308.1"
                     /translation="MNIYLLASAATLALASSPAFAAERPSTASLAEAAEGGGSNDAPQ
                     PTPGSAAEAHPDPDQKVVVTGIRRSAGDVLGGVSVIDEEQLSRVARPSIGETLASQPG
                     VTASSFGPTASRPILRGLSGERVRILVDGIGTLDLSSSDPDHQVTINPLTAERIEVLR
                     GPSALLFGSSAIGGVVNVIDTRIPRRVPDEPISFNGLVEYGSAANERSGNVAVDIPLG
                     NGFVTHADAAYSKYDDLEIGGFVLSKPLREEALASPDPGVRALAGLRGQLPNSAGRIA
                     DVAGGVAYVEGDLNLGFSVSRHTFNYGVPIRYSLDSEEAEAPVLDGRQTRVDMRANVP
                     IGGFFRIFEFRGGVSKYHHDEIEEDGSIGSSFFTRGGEMRATVVQTERGGWGGTSGVQ
                     YLRQKVRLSGEEKYLPDSVNKQLGLFTVQTLVRGPVRLEGGLRVESARLDADADRQIA
                     ANGGPIGAAPISRSFTPISASIGGNYTVADGWRAGLSFSHSERAPAIDELFANGPHGG
                     SETFEVGDPGLGKEVSNSAELSVHRTSGPVHVQGSVYYSRFSNFIFQAPTGEVRDGLP
                     LFHYLQGKANYYGFEIGADAKLGQALGIRWGGELVADAVRATIKGFGPAPQIPPFRVL
                     AALTGSRGQVDGRLEVERVWAQDRTAPVETRTPGYTMVNAALDWHPFAANPELTLSLQ
                     GHNLFDIDARRHTSLLKDYAPLAGRDVRISARVSF"
BASE COUNT          708 a         1229 c         1266 g          635 t
ORIGIN      
        1 caatgcctga gctcgaaatc ctcgaagcca aggttccggt tcgcacgccg gtgctggtga
       61 gggagcccga aagcgccacg tcgcgcatgg cccccgtcgc cagctggctc agcggcccag
      121 tgttcagccg ggcacgcgac atcttcgctg cgaacatgac cgagcttctc gaccgggccg
      181 aagacccggc gcggatgatc cggatgatca tcctcgagat ggaagagacg ctggtcgagg
      241 ttcgcgcaac ggccgcccgc tcgatcgccg acatgaagga aatgcggcgc tcgctgggcc
      301 ggctcgaaga aatccaggcg agctggaccg aaaaggccga gctggccctg tcgaagggcc
      361 gcgacgacct cgccaaggcc gctctgatgg agcgccagaa ggccgccgag atggcagagg
      421 gccttgccgc cgaaatggcg cagatccagg acgtactgcg cggttacgag gccgatatcg
      481 cccgcctcca gtccaagctc cgcgaagccc gcgctcgcca gaatgcgatc cagcaccggc
      541 tcgagagcgc ggtcacccgc gccaaggctc gcgagcttct gaacggaagc cggacggagg
      601 acgcattcag caagttcgag gtcctcgagc gccgcgcgga tttcgcggaa ggccgcgccg
      661 aagcgctcgg gatcagcccg ctcgaagacg agatcgacca gctccgcgca aacgagaaaa
      721 tcgacgccga gctggaagca atgaaggccg cgctcgcggc gaagaagaat taggaagggg
      781 aaggcaagat ggcccgcaag acctatcgtt attcgcttaa ccgccgcgac gccaagctgc
      841 tcggcgtctg ttccaagctc ggcgatcggt tcggaatcga tccgaccttc ctccggatcg
      901 gcgccgtggc cttcgccctg atggtcgagt tccagattgc tgtgatcgct tatgtcgcgc
      961 tcggcatcta cttcgcggtc aagcaaaagc agcaggcgcg tcgcgacgac aggagcgact
     1021 tcgagcggat ggactttgcc acgagcattc gcccgtcggt ccacgcgatg cggaccgagc
     1081 tcgacccgat cgatcgccgg ctgatggcga tcgagaacga gatttcgaaa cccaatgaag
     1141 agctggcgcg cgagatcgaa gcgctgcggg aggagaagtg atggaaccac tttcaattgg
     1201 cttgatcgct gccactgtcc tcgttgcgat cggaaccgcc gccctcgccg gcctcaaggg
     1261 ctggaatgcc tggctggagc tgaagcggat ggagctgacc cacacccttg ccgatcacgg
     1321 ccttccgcct gccggcaacc ggatcgagct tgccgacctc aaggagcgtg tgcgcaagct
     1381 cgaagccatc gcagccggaa tcgacatcta gagccccgga ccgcgttttg ctccccgtaa
     1441 acgcggcacc aggcggcccg ggacccacac cccgggccgc cttttcattt gtcagaagct
     1501 aacgcgcgcg ctgatcctga cgtcgcgccc cgctagcggc gcgtaatcct tgagaaggct
     1561 cgtgtgccgg cgagcgtcga tgtcgaagag attgtggccc tggagcgaaa gcgtcagctc
     1621 gggattggcc gcgaacgggt gccagtccag cgccgcattg accatggtgt agccgggcgt
     1681 gcgggtctcc accggggcgg tccggtcctg cgcccagacc cgctccacct ccagcctgcc
     1741 gtcgacctgc ccgcgcgagc cggtcagcgc tgcgaggacc cggaatggcg ggatctgcgg
     1801 cgccgggccg aaccccttga tcgtcgcccg gaccgcgtcg gcgacgagct cgccgcccca
     1861 ccggattccg agcgcttgcc cgagcttcgc gtcggcccca atctcgaagc cgtaatagtt
     1921 cgccttgccc tgcaggtaat gaaagagcgg aagaccgtcc cgcacttctc cggtcggcgc
     1981 ctggaaaatg aagttggaga agcggctata gtagacgctg ccctggacgt ggacgggtcc
     2041 acttgtccgg tgaacgctga gctcggccga attgctgacc tccttgccga ggccggggtc
     2101 gcccacctcg aaagtctcgc tcccgccgtg cggcccattg gcgaacagtt cgtcgatcgc
     2161 cggcgcccgc tcgctgtggg agaaggaaag gcccgcgcgc cagccatcgg cgaccgtgta
     2221 attgccgcca atggaagcgg aaatcggggt gaagctgcgc gagatcgggg cagcgccgat
     2281 cggaccgccg ttggctgcaa tctggcggtc ggcatctgcg tcgagcctgg ccgattcgac
     2341 tctcaagcct ccctcaagcc ggacggggcc gcggacgagc gtctgcacgg tgaacagccc
     2401 gagctgcttg ttgacgctgt cgggcaaata tttctcttcc ccggacaaac gcactttctg
     2461 gcgcaaatac tggactcccg atgtcccgcc ccagccgccg cgctccgtct ggacgacggt
     2521 agcgcgcatc tcgccgccgc gagtgaagaa gctggagccg atcgatccgt cctcctcgat
     2581 ctcgtcgtgg tggtatttcg acaccccgcc gcgaaattcg aagattcgga agaagccgcc
     2641 gatcgggaca ttggcgcgca tgtcgacgcg ggtctggcga ccgtccagaa ccggcgcttc
     2701 ggcttcctcc gaatcgagcg aatagcggat tggaacgcca taattgaaag tgtggcgact
     2761 gaccgaaaag ccgaggttga gatcgccttc gacataagcg acgccgccgg caacatcggc
     2821 gatcctgccc gcgctgttgg gcagttggcc ccggagtccg gcaagggcgc ggacgcccgg
     2881 gtccgggctt gcgagcgctt cttcgcggag cggcttggac agcacgaagc cgccaatttc
     2941 gagatcgtcg tatttcgaat aagcggcatc ggcatgggtg acgaagccgt tgccgagcgg
     3001 tatgtcgacc gcgacgttgc cggaccgttc gttggccgcg gagccatatt cgacgaggcc
     3061 gttgaagctg ataggctcat cgggaacgcg gcgcgggatt cgcgtgtcga tgacgttgac
     3121 gaccccacca atggccgacg atccgaagag cagcgccgac ggtccgcgaa ggacctcgat
     3181 ccgctcggcg gtgaggggat ttatcgtcac ctggtgatcg gggtcggacg aagacagatc
     3241 gagcgtcccg atcccgtcga ccaggattcg cacccgctct cctgaaaggc cgcgaaggat
     3301 gggacgcgac gcagtcgggc caaagctcga cgcggtcact ccgggctggg aggctagagt
     3361 ctcgccgatg cttggccgcg ccactcgaga aagctgctcc tcgtcgatca ccgacacgcc
     3421 gccaaggacg tcaccggcgc ttcggcgaat tccggttacg accactttct ggtccgggtc
     3481 cgggtgcgct tcggctgccg agccgggagt cggctggggt gcgtcgttcg aacccccgcc
     3541 ctcggctgct tcggcaaggg aagccgtgga tgggcgttcg gcggcgaatg ccggactgga
     3601 agcgagggca agcgtcgccg cggaggcaag caaatagatg ttcatcgggt ccaaactttg
     3661 tggagttcgg tcgcggccct atcgtcgatg atacaacatc acaagctcct ctgcttggtc
     3721 ttcgccgaac ggaagcgatc cttcgccgaa tggcggggtt gcggctttgc cgcagcgccg
     3781 gataaggcgc ggcatggccg agaggagcga cccgtttgct atctttgacg attggttc
//
LOCUS       DATAKH010000235        20341 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_27226,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000235 DATAKH010000000
VERSION     DATAKH010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 20341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20341
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27226"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VHN55_10080"
     CDS             <1..186
                     /locus_tag="VHN55_10080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804309.1"
                     /translation="VPQWLLDELLERINVQNSIPPPGMKVCRGRIFSPRDYLTDVTEW
                     GFSEPVGNLEEQYQEQH"
     gene            186..893
                     /locus_tag="VHN55_10085"
     CDS             186..893
                     /locus_tag="VHN55_10085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013053645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX2804310.1"
                     /translation="MKIAAIGDLHVTEDSVAPYRRMFEEISASADVLLLCGDLTNFGK
                     IPEAEILAEDISQCTIPVLGVLGNHDYECGQPEEVGRILHESGMIVLDEQAHEIEGVG
                     FAGVKGFLGGFGRGELAPFGEPEIKAFVNIANNEARKLENALRSLRTEKIVAVLHYSP
                     VADTLVGEPVEIFQYLGSARLADALDRFDNIAFVVHGHAHHGTYEGATMRGTPVYNVA
                     QPVLRETFGKPYTILEV"
     gene            complement(896..1066)
                     /locus_tag="VHN55_10090"
     CDS             complement(896..1066)
                     /locus_tag="VHN55_10090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804311.1"
                     /translation="MDNVPHQPSDDASERVDLAERLANYRSRVEREGRKAALRSIDRA
                     IDEARRKRKPPK"
     gene            1181..2320
                     /locus_tag="VHN55_10095"
     CDS             1181..2320
                     /locus_tag="VHN55_10095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX2804312.1"
                     /translation="MNRSPATPIRYDSEAHLRSILATVPDAMIVIDSKGTILSFSAAA
                     EKMFGYSEAEVEGQNVKMLMPSPHQERHDGYLKRYLDTGERRIIGIGRITSAKHRDGS
                     TFPIELSVGEAFLDGQHIFTGFIRDLTERQRAQLRLHEIQSELAHVGRVSEMGTLASA
                     LAHELNQPLTAVANYCEAARDLLAGEPDPDTLATIREALDDAAQQAVRAGQIVRRLRD
                     FMSHGEIERRLESLHALISEANALALVGSREHGIVIRIHLDATATEVFVDRIQIQQVL
                     VNLLRNAVDAMVSADRRVLTIHTADLPDEMVQVSVADTGGGISDAVAAQLFQPFVTSK
                     EAGMGIGLSICRTIVEAHGGRIWFEPSAEGGTVFHFTLPTAGVEE"
     gene            2317..2940
                     /gene="fixJ"
                     /locus_tag="VHN55_10100"
     CDS             2317..2940
                     /gene="fixJ"
                     /locus_tag="VHN55_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006952700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator FixJ"
                     /protein_id="HEX2804313.1"
                     /translation="MSEGQRLIHLVDDDEAIRRSAGFMLKTSGFRVSTYDSGNALLKE
                     AASLDPGCILLDIRMPGMDGLEVQQALKKRGVTLPVVIMTGHGDVTLAVQAMKAGAVD
                     FIEKPFEKAVLLGAIDQAFERLARSTAAKERAKDAQVRLQALTPREREVLDGLAQGLP
                     NKTIAYDLGISPRTVEIHRANLMTKLEVRSLSEALRIAFAAQDSPSG"
     gene            complement(2937..3986)
                     /locus_tag="VHN55_10105"
     CDS             complement(2937..3986)
                     /locus_tag="VHN55_10105"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX2804314.1"
                     /translation="MAKAPKQTGETGAFVARAMIVVALAAGAFLLWHLRYVLVLLFGA
                     VLVGTILRAIAGPFRRWFRFPDSLAVLTAVVVLAIVLVGTGWLLGAQIAAQTQTLTDS
                     LPAAVETVDDWLAGYGLHEPVNTWMNDIRNSGGAIVASFGTWLSNFGTAVANFLLVLF
                     GGIFLAAQPQFYRTGTIKLIPQARRALIAEAMDESETALRLWLKGQLISMVIVGTLTG
                     AGLWLLGLESWLVLGLLAGLLEFVPFAGPIVAAIPGILLALVVNPQLALWTTLMYVAV
                     QHVESYIIQPLVQQYAVHIPPVVLLFSLLAFAMLFGIIGVLFAAPLAVVTYVLVKRLY
                     VVEALDTPTPIPGED"
     gene            complement(4035..5231)
                     /locus_tag="VHN55_10110"
     CDS             complement(4035..5231)
                     /locus_tag="VHN55_10110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEX2804315.1"
                     /translation="MIDVVVPEEQEGTKAIVRSWLKQIGETVAENDPLVELETDKVTQ
                     EVPAPASGVLSEILLDTDAEAVPGAVLGRIEAGIPAGAGAQDAAQSAPSSALKAPAGA
                     PGPPSPGNGETRLSPSVRRACLQHGIDPTKIEGTGRDGRITREDVDRAVAAATVTKVA
                     EAATAQPRQISPNDIPHDRMRLKIAENMARAVSEQPHVTAVFEADFSAVAAHKAAMAA
                     KGVKLSYTAYIVKAAAEAMAAAPAINGRWEQDRIAISPTVDIGVGTALGEKGLIVPVV
                     KDAGSLTLEQVGERLDDLTRRAREDKLTGADVSGGSFTISNHGVSGSLVAAPIILHQG
                     QAAILGVGKLEKRAVVREIDGDDAIVILPMAYVTLTIDHRVVDGHQTNAWLTRFVEIL
                     ESWPLP"
     gene            complement(5233..7239)
                     /locus_tag="VHN55_10115"
     CDS             complement(5233..7239)
                     /locus_tag="VHN55_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2804316.1"
                     /translation="MDWERVARLVLTSREMDRIEEQELVPAKKVLYQFSARGHDMAQM
                     LLGMQLKDGDAACGYYRSRPMLLALGVDLADALGSGMGLAGGYSDGRDIGVVFNYPNP
                     GGAHALPMCGGVGAQYTPAAGWAQAIAYKNEVLGEGPEDAIALVLGGDASAATGGFWS
                     ALTIATTQKLPLLMYIEDNGYGISVPSEYQTPGKDIAANLASFSGLTIFNGDGTDPAE
                     AAKLVAEAVAHVRTQRAPALLRLKVPRLEGHSAQDTQAYKSEDEIAAEWKRDPLPKLK
                     AHCGLSDQKWEAIEREVAGQVAAAVAEAQSRGVSDPERVTSHVYCEGDLQQVGGRAGL
                     SLDGTTGTPKPEGQRINMVTAIRRTLDQELEANPRLLLFGEDIGPKGGVHAVTLGLQE
                     KYGRSRVFDTSLNEEGIVGRAVGMALAGLMPVPEIQFRKYSEPATEQIHDCGTMRWRT
                     NNRFAAPMVLRVPGGFFKCGDPWHSQTNEVEFVHNPGWKVAVPSNAEDAVGLLRSSLR
                     GNDPVIFFEHRAMYDEAWARRPWPGDDYVLPFGQAKKTREGDSITIVTWGAMVPRCEA
                     AAEGVGADVIDLRTLMPWDREMVLESVRRTRRCLIVHEDLRTGGFGAEIAAVVADEAF
                     LDLDAPVARVTMPDIPSPHHPRLLEWAVPSVADIRAEIDRLMGF"
     gene            complement(7271..8470)
                     /locus_tag="VHN55_10120"
     CDS             complement(7271..8470)
                     /locus_tag="VHN55_10120"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HEX2804317.1"
                     /translation="MLDQPEVTSRSIGNLEPVRSDSLLALIELANADRRPEKIDVGVG
                     VYRDSAGNTPILKVIKEAERRLLETQETKAYLGGRGDIRFAELLRPILLGEHSGDDRI
                     AGLQTPGGCGALTLGFNLIAKANPDARVLVGTPTWPNHGPIVRGAGLSIVEYPHYDRN
                     ERRLCFDRMMDAMKSAHSGDVVLLHGCCHNPTGADLSADQWAEVTAAIAERGLLPLVD
                     IAYQGFGEGLAPDGAGLRGILAACDDVIIAQSCDKNFGVYRDRVGSLWVKTSSVDATK
                     TAMGHVLQIAREMWSMPPDHGGAAVRTVLEDPKLNADWRAELEGMRGRIVALRQRLAA
                     ANPSFAYIADQKGMFSILPLTPEQVLQLRETHAIYMADSGRFNICGLSDDQVDRFASA
                     VLEVIGG"
     gene            complement(8511..9584)
                     /locus_tag="VHN55_10125"
     CDS             complement(8511..9584)
                     /locus_tag="VHN55_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX2804318.1"
                     /translation="MSAHFHPLRVAEIVPETADANSVRFEVPEELRDTFEFKAGQHLT
                     LKAEIDGEEVRRNYSLCTAPDERDWMVTVKRIGGGVFSNWVGDKLKAGDTVEVMPPHG
                     SFTTEFNATARRHLVGIAGGSGITPVMSLLRTLLKSEPESRFTLFYGNRDSSSVIFLE
                     ELARLKDRYLDRLELYHFLDAEEGDVELFNGMLDRERCDAAIEHLVRTPESVDGWFIC
                     GPGPMMDSAESALIDRGIARDKIRIERFTADRPPESLVKEMAELQTKAAGLTVSVTLD
                     GRTRKVPFTEGNILDSARAAGLPAPFACKAGVCATCRAKVVSGHVEMAARYGLTDEEV
                     EDGYVLTCQSVPAGDGVAVDYDA"
     gene            complement(9598..10338)
                     /gene="paaC"
                     /locus_tag="VHN55_10130"
     CDS             complement(9598..10338)
                     /gene="paaC"
                     /locus_tag="VHN55_10130"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaC"
                     /protein_id="HEX2804319.1"
                     /translation="MMAPDAARVDYLLRLGDDSLILAQRLSEWCGHAPALEVDLSLAN
                     ISLDLVGQATLLLGDLGDADQLAFHRDVLDFRNCILVEQPNGDFAQTIARQLLYSTWQ
                     HMLLQRLVNSSDKFLTEYAAKAVKEVAYHRELVAEWTVRLGDGTEESARRMADGLDWC
                     WRFIPELFEVDETLQQLIDSGIAADPREFEDEYRSAVAKVLEEASLEPPADQRPIVGG
                     RRGHHSEHLGHILAPMQFLQRTYPDAKW"
     gene            complement(10335..10619)
                     /gene="paaB"
                     /locus_tag="VHN55_10135"
     CDS             complement(10335..10619)
                     /gene="paaB"
                     /locus_tag="VHN55_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaB"
                     /protein_id="HEX2804320.1"
                     /translation="MSGDWPLWEVFVRTKGGLSHRHVGSVHAPDPELAIAHARDTYTR
                     RMEGVSLWVVPSKEIVASDPDQAGELFEPAENKIYRHPTFYDIPDEVKHI"
     gene            complement(10616..11596)
                     /gene="paaA"
                     /locus_tag="VHN55_10140"
     CDS             complement(10616..11596)
                     /gene="paaA"
                     /locus_tag="VHN55_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaA"
                     /protein_id="HEX2804321.1"
                     /translation="MYTTELQKSAKIETLDDPKLVEAFEARVAADEFIEPKDWMPEAY
                     RRTLIRQISQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYCAAET
                     LGIGRDEMTEALLSGKAKYSTIFNYPTLTWADIGAIGWLVDGAAIMNQVPLQRTSYGP
                     YARAMVRVCKEESFHQRQGYEIMIAMANGTSDQKRMAQDALNRWWWPSLMMFGPPDEN
                     SPNTAQSMRWKIKRETNDELRQKFVDITVPQADFLGLEVPDPDLKWNEEKGGYDFGEV
                     DWDEFYAVVKGEGPVAKERMAARQKAWDDGAWVREAADAHEAKRRSRKAA"
     gene            complement(11628..12053)
                     /gene="paaI"
                     /locus_tag="VHN55_10145"
     CDS             complement(11628..12053)
                     /gene="paaI"
                     /locus_tag="VHN55_10145"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyphenylacetyl-CoA thioesterase PaaI"
                     /protein_id="HEX2804322.1"
                     /translation="MDANELASRVAHEMLSTEGTGPAGGIRIDEARAGYCRLSMMLRD
                     DMLNGHGIAHGGMVFALADTAFAYVCNGRNEGTVAAQASIVFLGSAQVGETLVAEAEE
                     VASEGRSGVTHVSVVASDGRAIAEFTGYSRTIGGAVVEI"
     gene            12079..12858
                     /gene="paaG"
                     /locus_tag="VHN55_10150"
     CDS             12079..12858
                     /gene="paaG"
                     /locus_tag="VHN55_10150"
                     /EC_number="5.3.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004300 - enoyl-CoA hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA
                     isomerase PaaG"
                     /protein_id="HEX2804323.1"
                     /translation="MDYETIDFKLDGAIARITLNRPDRLNSFTAQMHEELRKALKAAE
                     GSRVVVLTGAGRGFCAGQDLNDRAVAPGEAVDLGDTVESGWNPLIRTLTSMPQPVIAQ
                     VNGVAAGAGANIALACDIVVAARSAKFIQSFSAIGLIPDSGGSWILPRLVGQARAMGL
                     ALTGEPLPAELAEQWGLIWKCVDDEALGSEVDAIAARLASLPPLGLAAIKSIVRSTWG
                     RSLDQELDLQRDEMRRLGFTEDYREGVAAFLEKRPPDFVGR"
     gene            complement(12855..13997)
                     /locus_tag="VHN55_10155"
     CDS             complement(12855..13997)
                     /locus_tag="VHN55_10155"
                     /inference="COORDINATES: protein motif:HMM:TIGR03106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant NAGGN system M42 family
                     peptidase"
                     /protein_id="HEX2804324.1"
                     /translation="MSPTINLDYLKDVLGRLLSVPSPTGYTDEIVRCVSRELEWLGIP
                     FSATRRGAILALYKGATNEGARAIVSHLDTLGATVKRIKDNGRLELVPIGTWSARAAE
                     TTRCTLFTDEGFLRGTVLPLKASGHTFGDEIDTQGVGWDHVELRIDADAEDRASVQAL
                     GVNVGDTVAFDPGTEMLDNGYIVSRHLDDKAGVAAMLAAMKAMKDAGTQVPVDMHFIF
                     TITEEVGSGASAVLLEDVVAMVSIDNGATAPGQNSAETGVTIGMADSVGPFDYHLTRK
                     LLRLCEEENIPHQRDVFRYYRSDSASAIGGGADVRTALITFGIDASHSYERIHLSALE
                     SIARLVCAYASSTVQISRDTEELADLEGFTTQPTERAATGREEPER"
     gene            complement(13981..15741)
                     /gene="ngg"
                     /locus_tag="VHN55_10160"
     CDS             complement(13981..15741)
                     /gene="ngg"
                     /locus_tag="VHN55_10160"
                     /inference="COORDINATES: protein motif:HMM:TIGR03103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglutaminylglutamine synthetase"
                     /protein_id="HEX2804325.1"
                     /translation="MARSPRTPRAEPLFPYLNNPTAPQPRRNACVDVGWGRVLFAQTF
                     ESAEKLLSELRAEGDEQRDIAMYVTDPHVLLAAAPAELFLDPSHTYRLNLNTYRPSKR
                     RPSGFFVRRMIPENDADAVNRIYSAHNMVQVRPDFFEEQNKDDRRLLTYFVAEDAETG
                     DIIGTVTGIDHSIAFDDVEGSSLWALAVDPQTPHARVGEVLVRWLAEHYQTRGAAYMD
                     LSVMHDNEGAIALYDKLGFHRMPLFTVKRRNVINERLFVGSDPAEAMNPYARIIIDEA
                     RRRGIDVDVLDADGGLFELRLGGRRIRCRESLCDLTTAVALSICDDKGMTRRIVKAAG
                     VNVPDEVESDDLDGVRKLLRKHKSVVVKPARGEQGRGVAVDLTSMREVTAAIKRASAQ
                     SDRVLVESYHPGDDLRIIVIGFKVVAAAIRRPATVVGDGRHTVRELIERQSRRRSAAT
                     GGESIIPLDVETVRSVGRAGYTLDDVPESGKSFAVRKTANLHTGGTIHDVTGVIHPRL
                     AESAVQVARAIDIPVVGVDFIVPSVSLPDHVFIEANERPGLANHEPQPTAQRFIDLLF
                     PLSRPERARKRGKTKNEPDD"
     gene            complement(15741..17519)
                     /locus_tag="VHN55_10165"
     CDS             complement(15741..17519)
                     /locus_tag="VHN55_10165"
                     /inference="COORDINATES: protein motif:HMM:TIGR03104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglutaminylglutamine amidotransferase"
                     /protein_id="HEX2804326.1"
                     /translation="MCGIAGEVRFDGAIADAGAVAAMMRSQARRGPDACGQVMRGRVG
                     MGHQRLKIIDLSFHSAQPMVDAELGLDLVFNGCIYNYRELRAELEGKGYRFFSDGDTE
                     VILKAYHAWGADCVKRFKGMFAFAIHERESGRVVLGRDRYGIKPLYYSHIGKRLRFSS
                     TLPGIVAAGDVDTSIDRTALHFYMSWHAVVPPPLTILNGVRKLPPATVRVYEEDGRFT
                     DTCYWNPPFGPQDGDAARSKADWEERLHECLRVAVKRRMVADVPVGVLLSGGVDSSLI
                     VGLLAELGQTGLSTFSIGFEEAHGEKGDEFVYSDLIADHYGTDHHKIFIPSEELLEHL
                     PDTIEAMSEPMVSYDNIGFYLLSREVAKHIKVVQSGQGADEIFAGYHWYPPMQAANDP
                     VSAYARAFFDRGADKLNSHLGSEWRNGGEAPLKYLREHFARPGADDPVDKALRLDSTV
                     MLVDDPVKRVDNMTMAWGLEARVPFLDHHLTELAARIPAGLKLAQGGKGILKDVARDV
                     IPSEVIDRPKGYFPVPALKYIQGPYLTLVQDALSSAAARERGLFTQDYLDSLFADPKA
                     HITPLRGSELWQVGLLELWLQKHGVG"
     gene            17669..19690
                     /gene="paaZ"
                     /locus_tag="VHN55_10170"
     CDS             17669..19690
                     /gene="paaZ"
                     /locus_tag="VHN55_10170"
                     /inference="COORDINATES: protein motif:HMM:TIGR02278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation bifunctional
                     protein PaaZ"
                     /protein_id="HEX2804327.1"
                     /translation="MKTTQLLNYERDRWIAGQDGLSELPSAIDGSPVAIAGSGGLDFG
                     AMLRHAREVGGPALSKMTFHERARLLKGLALAIMDRKEELYELSYQTGATRKDGWIDI
                     EGGAGTLFSFSSKGRRELPDAHVLLDGPLEPLSKGGSFVGQHIYTSMQGAAVHINAFN
                     FPVWGMLEKLAPTLLAGVPAIVKPASATSYLTEAAFRVMIESGLLPAGAVQLIVGSVG
                     DLFDHLTGQDVVSFTGSASTAYKLRTHPTVMRESVKFIAEQDSLNASILGPDAAPGSP
                     EFDLFVREVAIEMTVKAGQKCTAIRRAIAPAEHMDAVEEALRDRLAKMTLGNPRSEDT
                     RMGALVSLSQCKDVREKIAELEAAGARIVAGDPDAEPPVKGGSFLQPILLRSDEPWNN
                     EAVHDVEPFGPVSTIMPYKDLDDAIALANRGKGSLVLSLFTHSPDAARDFVRGTASFH
                     GRMLVIDRDNARESTGHGSPLPVLVHGGPGRAGGSEEMGGVRGVKHYMQRTALQTSPA
                     MVAAITGQYVAGAPKHVIDAHPFRLKMSELNVGDTWVTGSRTVTIEDIEHFAEFTGDK
                     FYAHMDEEAAKASPIFEGRVAHGYLILSFAAGLFVDPDPGPVLANTGLENLRFLTPLY
                     PGDSMRVELTVKAKSIKTEETGQVRWAVDVFNQDDELVATYDLLTENVP"
     gene            19754..20185
                     /locus_tag="VHN55_10175"
     CDS             19754..20185
                     /locus_tag="VHN55_10175"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX2804328.1"
                     /translation="MKVSEVMTRDVKTVRPNQTTREAAGFMLSEDTGSIPVSDGDRLV
                     GMITDRDIAVRGVAKGHGPDTLVRDVMTDDVICARESDDVEEVATKMSKEQVRRMPII
                     DASDKLCGIVSLGDLSREADDDCAERALEGVSAPGDKHQQG"
BASE COUNT         3545 a         6801 c         6470 g         3525 t
ORIGIN      
        1 gtgccgcagt ggctgctcga cgagctgctc gagcggatca acgtccagaa cagcattccg
       61 ccgccgggga tgaaggtttg ccgcggccgg atcttctcgc cccgggatta tctgaccgac
      121 gtcactgaat ggggcttctc cgagccggtc ggcaacctcg aagaacaata tcaagagcag
      181 cattgatgaa gatcgcagcg atcggagacc ttcacgtcac cgaagacagc gtcgcgccct
      241 atcggcggat gttcgaagag atttcggcaa gcgccgacgt gctcctgctg tgcggcgacc
      301 tgaccaattt cggcaagatc ccggaggccg aaatcctcgc cgaagacatc agccagtgca
      361 cgatcccggt gctcggagtg ctcggcaacc acgattacga atgcggccag cccgaggagg
      421 tcggtcggat cctccacgaa agcgggatga tcgtgctcga cgagcaggcg cacgagatcg
      481 agggcgtcgg ctttgccgga gtgaaaggct tcctcggcgg cttcgggcgc ggcgagctgg
      541 cgccgttcgg ggagccggag atcaaggcgt tcgtgaatat cgccaacaac gaggcacgaa
      601 agctcgagaa tgcgttgcgg tcgttgcgca cggaaaagat cgtcgccgtg cttcactatt
      661 cgccggttgc ggacacgctg gtcggcgagc cggtcgaaat cttccagtat ctcggatcag
      721 ctcggcttgc ggacgcgctc gaccgcttcg acaacatcgc cttcgtggtc cacggccacg
      781 cgcaccacgg aacctacgaa ggggcaacga tgcggggcac gcccgtctac aacgtcgcgc
      841 aacccgtgct gagggaaact ttcggaaagc cctatacgat actcgaggtg tgatcttact
      901 tcggcggctt ccgcttgcgc cgcgcctcgt cgatcgcccg gtcgatgctt ctcaatgcgg
      961 ccttacggcc ctcgcgctcg acccgcgaac gatagttcgc aagccgctcg gcaaggtcga
     1021 cgcgctccga tgcgtcgtcg cttggctgat gtgggacatt gtccatcgtg aactggaatg
     1081 taggcgcgct cgctcgtaac ggggataggt aagactcctg atgggcgcgc aagcgagcga
     1141 cgccttagcc tttgtcgaag ccttcgctaa gacgcgcccg atgaaccgat cccccgccac
     1201 gccgattcgc tacgacagcg aagcgcactt gcggtcgatc ctggcgaccg tccccgacgc
     1261 gatgatcgtg atagattcga aaggcaccat cctgtcgttc agcgccgcag cggagaagat
     1321 gttcggctac agcgaagccg aggtcgaagg gcaaaatgtg aagatgctga tgccgtcccc
     1381 gcaccaggag cggcacgacg gctacctgaa gcgctatctc gataccggcg agcggcggat
     1441 catcggcatt ggccggataa cgtcggcaaa gcaccgcgac gggagcacct tcccgatcga
     1501 gctgtccgtg ggcgaagcat tcctggatgg ccagcacatc ttcaccggct tcatccgcga
     1561 cctgaccgag cggcagcgag cgcagctccg gctccacgaa atccagtcgg agctcgccca
     1621 tgtcgggcgg gtcagcgaaa tgggcacgct tgcctcggcg ctcgcgcacg aactcaacca
     1681 gccactgacc gccgtcgcca attattgcga agcggcgcgc gacctgctcg caggagagcc
     1741 cgatcccgat accctggcca ccattcgcga agctctcgac gatgccgcgc agcaggccgt
     1801 tcgcgccggg cagatcgtca gaagacttcg cgacttcatg tcccacggtg agatcgaacg
     1861 gcggctggaa agcctccacg cgctgatcag cgaggccaat gcgctagcgc tggttggctc
     1921 gcgcgaacat gggatcgtaa tccgaatcca cctcgacgcg acggcgacgg aggttttcgt
     1981 cgaccggatc cagatccagc aggtgctggt gaacctgctc cgcaatgccg tcgacgcgat
     2041 ggtctccgcc gaccgccgcg tcctgaccat acacaccgcc gatttgccgg acgaaatggt
     2101 tcaggtgagt gtcgccgaca ccggcggggg catttccgac gcagtcgccg cacagctgtt
     2161 ccagccgttc gtcacttcca aggaggccgg catgggcatc ggcctgtcca tctgccggac
     2221 catcgtcgag gcgcacggcg gccgaatctg gttcgagccg agcgccgagg gcggcacagt
     2281 cttccatttc accttgccaa ccgccggagt cgaagagtga gcgaaggaca aagactgatc
     2341 cacctggtcg acgacgacga agcgatccgc cgctcggcgg ggttcatgct gaagacttcg
     2401 ggcttccgag tgagcaccta tgactcgggc aatgccctgc tcaaggaggc ggctagcctc
     2461 gaccccggct gcatccttct cgatatccga atgccgggaa tggacgggct ggaagtgcaa
     2521 caggcgctta agaaacgcgg cgtgaccctg ccggtcgtga tcatgaccgg gcacggcgac
     2581 gtcaccctcg cagtgcaggc catgaaagcc ggcgcggtcg acttcataga aaagccgttc
     2641 gagaaagcgg ttctcctcgg cgccatcgac caggcattcg aaaggctcgc gcgctcgact
     2701 gccgcgaaag agcgggcgaa ggatgcccag gtccggctgc aggcgctcac tccccgcgag
     2761 cgcgaagtcc tcgacgggct cgctcagggc ctgcccaaca agaccatcgc ctacgacctt
     2821 ggaatcagcc cgcggacggt cgagatccat cgcgccaatt tgatgacgaa gctcgaggtc
     2881 aggagcctct cggaggcgct tcgaatcgcc ttcgccgcgc aggattcgcc gagcggctaa
     2941 tcctcgccgg gaatcggcgt cggagtgtcg agcgcctcga ccacgtacaa gcgcttcacg
     3001 agcacgtagg tgacgaccgc gagcggcgcg gcgaacaaca cgccgatgat cccgaacagc
     3061 atcgcgaagg caagcaggga gaagagcagc acgaccggcg ggatgtgtac cgcatattgc
     3121 tgcacgagcg gctggatgat gtaggattcg acgtgctgca cggcgacata catgagcgtc
     3181 gtccacagcg cgagttgcgg gttcacgacg agggcgagga ggattccggg aatcgcggcg
     3241 acgatcggcc ccgcgaacgg aacgaactcg agcaatccgg caagcagccc aagcaccaac
     3301 caggattcta gccccagcaa ccacaggccg gccccggtca atgtcccgac gatgaccatc
     3361 gagatcaact gccccttcag ccacaggcga agggcggttt ccgattcatc catcgcctcg
     3421 gcaatgaggg cgcgcctagc ctgcgggatc agcttgatcg ttccggttcg atagaattgc
     3481 ggctgcgcgg caaggaagat tccgccgaac aggacgagaa ggaaatttgc gacagcggtt
     3541 ccgaaattcg agagccaggt gccgaagctg gcgacgatcg ctccgccact gttccggatg
     3601 tcattcatcc acgtattgac cggctcgtgg agcccgtagc ccgcgagcca gtcgtcgacc
     3661 gtttccactg cggccggaag ggaatcggtc agggtctgag tctgcgctgc gatctgcgcg
     3721 ccaagcagcc agcccgtccc gaccaggacg atggcgagaa cgaccacggc ggtgaggacg
     3781 gcaagcgaat cgggaaaccg aaaccagcgc ctgaacgggc cggcgatcgc gcgcaggatc
     3841 gtcccgacca ggactgcccc aaacagcagg acaagcacgt agcgcaagtg ccagagaagg
     3901 aacgcgccag cggcaagcgc gacgacgatc attgcgcggg cgacgaacgc gcctgtctcg
     3961 cctgtctgtt tcggagcctt ggccatcggc gtctcaaccc cttcgaagcg gcgaccgttc
     4021 cggagccgca gcgatcaagg gagcggccag ctttccaata tctcgacgaa ccgggtcagc
     4081 cacgcattgg tctggtgccc gtcgacgact cggtgatcga tggtgagcgt gacgtacgcc
     4141 atcggcagga tgacgattgc gtcgtcgccg tcgatttcgc gaacgaccgc gcgcttttcg
     4201 agcttgccga ccccgaggat cgcagcctgg ccctggtgaa ggatgatcgg cgcggcgacc
     4261 agcgaacccg acactccgtg gttggagatg gtgaagctcc cgcccgacac gtcggcgccg
     4321 gtcagcttgt cctcgcgcgc tcggcgggtc aggtcgtcga ggcgctcgcc gacttgctcc
     4381 agtgtcaacg agccggcgtc cttgaccacc ggcacgatca gccccttctc gccgagcgcg
     4441 gtgccgactc cgatgtcgac cgttggcgaa atcgcgatcc ggtcctgttc ccagcggccg
     4501 ttgatggccg gagccgccgc catcgcctcg gccgcggcct tgacgatata agcggtgtag
     4561 ctgagcttca cgcccttggc cgccatcgcc gccttgtgcg cagcaaccgc cgaaaaatct
     4621 gcttcgaata cggcagttac gtgcggttgc tcagaaacgg cgcgagccat gttctcggca
     4681 atcttgagcc gcatccggtc gtgcggaatg tcgttcgggg aaatctgccg aggctgggcg
     4741 gtggccgctt cggcgacctt ggtgacggtt gccgcggcaa ccgcgcgatc gacatcctcg
     4801 cgcgtgatcc gcccgtcgcg cccagtgccc tcgatcttag tggggtcgat tccgtgctga
     4861 aggcaggcgc ggcggacgga gggtgaaagc cgcgtttctc cgttccccgg cgaagggggc
     4921 ccaggagcgc cggcaggtgc tttcaaagcg gaagatggtg ctgactgcgc agcatcctgg
     4981 gccccggcgc ccgccgggat accagcctca atccgcccga gcaccgcccc cggcaccgcc
     5041 tcggcgtccg tgtcgagcaa tatctcggac aacacccccg acgcgggcgc cggcacttcc
     5101 tgcgtgacct tgtcggtctc cagctccacc agcggatcgt tttccgcgac ggtctcgccg
     5161 atttgcttga gccacgaacg gacgatcgct ttcgtcccct cctgctcctc cggaacgacg
     5221 acgtcgatca cgtcagaacc ccatcagtcg gtcgatctcg gcgcggatgt ccgcgaccga
     5281 cggaaccgcc cattcgagga gcctgggatg atgcgggctc gggatgtccg gcatcgtcac
     5341 ccgcgcaacc ggcgcgtcca ggtcgaggaa agcttcgtcc gcaacgaccg ccgcgatttc
     5401 cgcgccgaaa cctcccgttc gaaggtcctc gtggacgatc aggcagcgcc gggtccgccg
     5461 aacgctttcc agcaccatct cccggtccca aggcatcaag gtgcgaaggt cgatgacgtc
     5521 ggcgccgaca ccctcggccg ccgcttcgca ccgcggcacc atcgcccccc aggtgacgat
     5581 ggtgatcgaa tcgccttcgc gggtcttctt cgcctgaccg aacggaagca cataatcgtc
     5641 gccgggccag ggccgccgcg cccacgcctc gtcgtacatc gcccgatgct cgaagaagat
     5701 caccgggtcg ttgccgcgaa ggcttgatcg gagaagcccc actgcatctt ccgcgttcga
     5761 gggaaccgcg accttccagc cgggattgtg gacgaactcg acctcgttgg tctggctatg
     5821 ccacgggtcg ccgcacttga agaagccgcc cggcacccga agcaccatcg gcgccgcgaa
     5881 gcggttgttg gtgcgccagc gcatcgtccc gcaatcgtgg atctgctcgg tcgccggctc
     5941 ggaatatttg cggaactgga tttccggcac cggcatcagc ccggcgagcg ccatccccac
     6001 cgcgcgcccg acgatgcctt cctcgttgag cgacgtgtcg aagacccggc tgcggccata
     6061 tttctcctgc agcccaaggg tcaccgcgtg gactccgccc tttgggccga tatcctcacc
     6121 gaacaggagc agacgcgggt tcgcctccag ctcctggtcg agcgtgcgcc ggatggcggt
     6181 gaccatgttg atccgctgcc cctcgggttt cggcgtgccg gtagtgccgt cgaggctcag
     6241 gccggcgcgc ccgccgacct gctgcaggtc cccctcgcaa tagacgtggc tcgtgacccg
     6301 ctcgggatcg gaaacgccgc gcgattgcgc ttcggcgacc gcggcagcga cctggccggc
     6361 cacctcccgc tcgatcgctt cccacttctg gtccgacagg ccgcaatgcg ctttgagctt
     6421 cggaagcggg tcgcgcttcc actcggcggc gatctcgtcc tcgctcttgt acgcctgcgt
     6481 gtcctgcgcg ctgtgcccct cgagccgggg cactttcagc cgaagcagcg ccggcgccct
     6541 ctgggtccga acgtgcgcga ccgcctcggc cacgagcttc gctgcttccg ccgggtcggt
     6601 gccgtcgccg ttgaagatag tcaggccgct gaagctggcg aggttggcgg cgatatcctt
     6661 gccgggcgtc tggtattcgg acggcaccga gattccgtag ccattgtcct cgatgtacat
     6721 cagcagcggc agcttctgcg tggtcgcgat cgtcagcgcc gaccagaaac cgccggttgc
     6781 cgcgctggca tcgccgccga gaaccagcgc aatcgcgtcc tccggcccct cgccgagcac
     6841 ctcgttcttg taggcgatcg cctgcgccca gccggcagcc ggcgtatatt gagcgccgac
     6901 tccgccgcac atcgggagcg catgcgctcc gcccgggttg ggataattga acacgacgcc
     6961 gatatcgcga ccgtccgaat agccgccggc aagccccatt cccgagccga gagcgtcggc
     7021 aagatccact cccagggcca gaagcatcgg ccgcgagcga taatagccgc aggcggcatc
     7081 gccgtccttg agctgcatcc caagcagcat ctgcgccatg tcatggccgc gcgccgagaa
     7141 ttggtagagc accttcttcg ccgggacgag ctcctgctcc tcgatccggt ccatctcgcg
     7201 cgacgtcagg acgagccggg caacgcgctc ccaatccact tttgcgccgc taaatcgaac
     7261 cgaatccgct tcagccaccg atcacctcga gaaccgccga ggcgaagcgg tcaacctggt
     7321 cgtcggacag gccgcaaatg ttgaagcggc cgctgtcggc catgtagatc gcatgggttt
     7381 cgcgaagctg gagcacctgc tcgggtgtga gcggcaggat cgaaaacatg cccttctggt
     7441 cggcgatgta agcgaacgac gggttagccg cggccaggcg ctggcgaagg gccacaatcc
     7501 gcccgcgcat cccctcgagc tcggctcgcc agtcggcgtt gagcttcggg tcttcgagga
     7561 cggtccgcac tgcagcgccg ccgtgatcgg gaggcatcga ccacatttca cgggcgattt
     7621 gaaggacatg ccccatggcg gttttggtcg catcgacgct tgaggtcttg acccacagcg
     7681 aaccgacacg gtcgcggtaa acgccgaaat tcttgtcgca gctttgcgcg atgatgacgt
     7741 cgtcgcaggc ggcaaggatt ccacggagcc cggctccatc gggcgcaagc ccctcgccga
     7801 aaccctggta ggcaatgtcg accagcggca atagcccgcg ctcggcgatc gcggcggtga
     7861 cctcggccca ctggtcggcg cttaggtcgg caccggttgg attgtggcag cagccgtgga
     7921 ggaggacgac gtcgccggaa tgcgccgact tcatcgcgtc catcatcctg tcgaaacaga
     7981 gccggcgctc gttgcggtcg taatgtggat attcgacgat gctcagcccg gcgccgcgaa
     8041 cgatcgggcc atggttgggc caggtcggag tcccgaccag cactcgagca tcgggattgg
     8101 ccttcgcaat caggttgaag ccgagggtca gcgcaccgca accgcccggc gtctgcaacc
     8161 ccgcgatgcg gtcatcgccc gaatgctcgc cgagcaggat cgggcgcaga agctcggcaa
     8221 agcggatgtc gccgcgccca ccgagatagg ccttcgtttc ctgggtctcg agaagccgcc
     8281 gctcggcttc cttgatgacc ttcaggatgg gcgtgttgcc ggcgctgtcg cggtagacgc
     8341 cgactccgac gtcgatcttt tccgggcgtc gatcggcgtt ggcgagctcg atgagcgcaa
     8401 gcagggaatc gcttcgcaca ggctcgagat tgccgatcga tcggcttgtc acttcgggtt
     8461 ggtccaacat gaaatcggct tagccgcaaa cccctgagcg cgcaaaatgc tcaggcgtcg
     8521 taatcgaccg cgactccgtc gccggcgggg accgactggc aggtcagcac atagccgtcc
     8581 tcgacctcct cgtcggtgag gccgtagcgc gccgccattt ccacgtgccc gctcaccacc
     8641 ttggctcggc aggtcgcgca cacgcccgcc ttgcaggcga acggcgccgg aagtccggcc
     8701 gcgcgggcgc tgtcgaggat attgccctcg gtgaacggca ctttgcgggt tcggccgtcg
     8761 agggtcaccg ataccgtcag gcccgctgcc ttcgtctgca gttcggccat ttccttgacc
     8821 agcgattccg ggggccggtc ggcggtgaag cgctcgattc ggattttgtc gcgggcgatt
     8881 ccgcggtcga tcagcgcgct ctccgccgaa tccatcatcg gccccggtcc gcagatgaac
     8941 cagccgtcga cgctttcggg cgtccgcacc agatgctcga tcgcggcgtc gcagcgttcg
     9001 cggtcgagca ttccgttgaa cagctcgacg tcgccctcct cggcgtcgag gaagtggtag
     9061 agctcgagcc ggtcgagata gcggtccttc aggcgagcga gctcctcgag gaagatcacc
     9121 gagctgctgt cacggtttcc atagaacaag gtgaagcggc tctccggctc cgatttcaac
     9181 agcgtccgca gaagcgacat gaccggggtg atccccgacc cgccggcgat cccgacgagg
     9241 tgccgccttg cagtcgcgtt gaactcggtg gtgaagctgc cgtgcggcgg catcacctcg
     9301 acagtgtcgc cggctttcag cttgtcgccg acccagttgg aaaagacgcc gccgccgatc
     9361 ctcttgacgg ttaccatcca gtcgcgttcg tccggggcgg tgcagagcga gtaattgcgg
     9421 cgcacctcct cgccgtcgat ctcggccttc agcgtcaggt gctggccggc cttgaactcg
     9481 aacgtgtcgc gaagctcttc gggcacctcg aagcgaaccg aattggcatc cgccgtttca
     9541 ggcacgattt cggcaacgcg aagcgggtgg aaatgcgcgc tcaccttgcg gcctgcttca
     9601 ccacttggcg tcggggtagg tgcgctggag gaactgcatc ggcgcaagga tgtggccgag
     9661 gtgctcgcta tgatggccgc ggcggccgcc gacaatcggg cgctggtcgg cgggcggctc
     9721 gaggctcgcc tcttcaagta ccttggcgac tgccgagcga tattcgtcct cgaactcgcg
     9781 ggggtccgcc gcgataccgc tgtcgatcag ctgctgcagg gtctcgtcga cctcgaacag
     9841 ctcgggaatg aagcgccagc accagtcgag cccgtcggcc atccgccgtg cgctctcctc
     9901 ggtcccgtcg ccgagccgaa ccgtccattc ggccaccaac tcgcggtgat atgcaacttc
     9961 cttgaccgcc tttgcggcat attcggtgag gaacttgtcg gaggaattca ccaaacgctg
    10021 cagaagcatg tgctgccaag tcgaatagag cagctggcga gcgatcgttt gagcgaaatc
    10081 cccattcggc tgctcgacga ggatgcagtt cctgaagtcg aggacgtcgc gatggaaggc
    10141 caactggtcg gcatccccga gatcgccgag cagcagcgtc gcctgcccca ccaggtcgag
    10201 cgagatgttg gcaaggctga ggtccacttc gagcgccggc gcgtgcccgc accattcgct
    10261 gagccgctgc gccaggatca gcgaatcgtc accgaggcgg aggaggtagt cgactcgcgc
    10321 cgcgtccggc gccatcatat atgcttcacc tcgtcgggga tgtcgtagaa ggtcgggtgg
    10381 cggtagatct tgttttccgc cggctcgaac agctcgcccg cctggtcagg gtcggatgcg
    10441 acaatctcct tcgacggcac cacccacagg ctcaccccct ccatccgacg cgtgtaggtg
    10501 tcgcgcgcgt gggcgatcgc gagctccggg tcaggagcat gaacgctgcc aacgtggcga
    10561 tgcgaaaggc cgcccttggt gcggacgaaa acctcccaga gcggccagtc gccactcacg
    10621 ccgccttcct cgaacggcgc ttcgcctcgt gcgcgtcggc ggcctcgcgg acccaggcac
    10681 catcgtccca agccttctgg cgggctgcca tgcgctcctt ggcgaccggc ccttctccct
    10741 tcacgacggc gtagaactcg tcccagtcga cctcgccgaa gtcgtagccg cccttctcct
    10801 cgttccactt gaggtccgga tcgggaacct cgaggcccag gaaatccgcc tgcgggacgg
    10861 tgatgtcgac gaacttctgg cgaagctcgt cattggtctc gcgcttgatc ttccagcgca
    10921 tcgattgcgc cgtgttgggg ctgttctcgt ccggcggccc gaacatcatc aatgacggcc
    10981 accaccagcg gttgagcgcg tcctgcgcca tccttttctg gtccgaagtg ccgttcgcca
    11041 tcgcgatcat gatctcgtag ccctggcgct ggtggaaact ctcttccttg cacacgcgca
    11101 ccatggcgcg ggcataggga ccgtagctcg tgcgctgcag gggcacctgg ttcatgatcg
    11161 ctgcgccgtc gacaagccag ccgatcgcgc cgatgtccgc ccaggtcagc gtcggatagt
    11221 tgaagatcgt gctgtacttg gctttccctg agagcagcgc ctcggtcatc tcgtcgcggc
    11281 cgatgcccag cgtttcggcg gcgcagtaga ggtaaagccc gtgccccgcc tcgtcctgca
    11341 ctttggcgag caggatcgcc ttgcgccgga gcgtcggcgc gcgagtgatc caattgcctt
    11401 ccggaagcat gccgacgatc tcgctgtggg cgtgctgcga aatctgcctg atcagggtgc
    11461 gccgatacgc ctccggcatc cagtccttgg gctcgatgaa ctcgtcggcc gcgacccgtg
    11521 cctcgaatgc ctcgaccagc ttggggtcgt cgagggtctc gatcttggca ctcttctgaa
    11581 gctcggtcgt gtacatggtc tcgatgtagt ccctggcgcc taaacgttca aatctccacg
    11641 accgctccgc cgatcgtccg cgaatagccg gtgaactccg cgattgcccg tccgtccgaa
    11701 gccaccaccg agacgtgcgt gaccccgctt cgcccctcgc ttgcaacttc ctcggcctcg
    11761 gcaaccagcg tctctccaac ctgggccgag ccgaggaaga cgatcgacgc ctgcgccgcg
    11821 accgtgccct cattcctgcc attgcagaca taagcgaagg cggtgtcggc gagcgcgaac
    11881 accatccccc cgtgcgcaat tccgtgcccg ttgagcatgt cgtcgcgaag catcatcgat
    11941 aggcggcaat agcccgcccg cgcttcgtcg atgcgaatcc ccccggcagg ccccgtgccc
    12001 tccgtcgaga gcatctcgtg cgcgacccgg cttgcgagtt cgtttgcgtc cactgcccct
    12061 ccttcgctaa tccggggcat ggattacgag accatcgact tcaagctcga cggcgccatc
    12121 gcccggatca ctctgaaccg ccccgaccgc ctcaacagct tcaccgcgca aatgcacgag
    12181 gagcttcgca aggcgctgaa ggccgcggag ggctcgcggg tcgtcgtcct caccggagcc
    12241 ggccgcggct tttgcgcggg gcaggatctc aacgatcgcg cggtggcgcc cggcgaggcg
    12301 gtcgatttgg gtgacacggt cgaaagcggc tggaacccgc tgatcaggac cctcacctcg
    12361 atgccccagc cggtcatcgc ccaggtcaat ggagtggccg ccggtgccgg cgccaacatc
    12421 gcgctcgcct gcgacatcgt cgtcgccgcc cgttcggcga agttcatcca gagcttttcc
    12481 gcgatcggcc tcattcccga cagcggcggc tcgtggatcc ttccccgcct cgtcggccag
    12541 gcccgggcga tggggctggc tctgaccggc gaaccgctcc ccgccgaact ggccgagcaa
    12601 tggggcctga tctggaaatg tgtcgatgac gaggccctcg gcagtgaagt cgacgcgatc
    12661 gcggccaggc tcgcctcgct tccgccgctc ggcctcgcgg cgattaaatc gatcgtccgc
    12721 tcgacctggg gccgctcgct cgaccaggaa ctcgacctgc agcgcgacga gatgcgccgc
    12781 cttggcttca ccgaagatta tcgcgaaggc gtcgccgcat tcctggagaa gcgaccgccc
    12841 gatttcgtcg gccgctagcg ttccggttct tccctgccgg tcgcggcccg ttccgtgggc
    12901 tgggtcgtga agccttcaag gtctgcaagc tcctcggtat cgcggctgat ttgcaccgtg
    12961 ctcgaagcgt aagcgcaaac aagcctggcg atgctttcca gcgccgagag gtgaatgcgt
    13021 tcgtagctgt ggcttgcgtc gatcccgaag gtgatcagcg cggtccgaac gtccgccccg
    13081 cccccgatcg ccgatgcgct gtcggaacgg taatagcgga agacatctcg ctggtgcggg
    13141 atgttctctt cctcgcacag cctgagcagc ttgcgagtca aatgataatc gaacgggccc
    13201 actgaatcgg ccattccgat cgtgaccccg gtttcggcgc tgttctgccc cggcgcggtg
    13261 gcgccgttgt cgatcgagac cattgcgacg acatcctcca gaagcaccgc cgaagcaccc
    13321 gagccgacct cctcggtgat ggtgaagatg aaatgcatgt cgacgggaac ttgcgtccct
    13381 gcgtccttca tcgccttcat cgccgcgagc atcgccgcca cgccggcttt gtcgtcgaga
    13441 tggcgcgaga cgatgtagcc gttgtcgagc atctcggtgc cgggatcgaa cgcgaccgtg
    13501 tcgccgacat tcaccccgag ggcctgaaca ctggcgcgat cctcggcgtc cgcgtcgatt
    13561 cgaagctcca catggtccca gccgacgccc tgggtgtcga tctcgtcgcc gaacgtatgt
    13621 cccgacgcct tgagcggaag caccgtgccg cggaggaatc cctcgtccgt gaacaaggtg
    13681 cagcgggtcg tttccgccgc ccgcgccgac caggtgccga tcgggacaag ctccagccgg
    13741 ccattgtcct tgatccgctt caccgtcgcc ccgagcgtgt cgaggtggga gacgattgcc
    13801 cgagcgcctt cgttggtcgc gcccttgtag agcgcgagga tcgcaccgcg gcgggtggcg
    13861 gaaaagggaa ttccaagcca ctcgagctcc ctcgagacgc agcggacgat ctcgtcggtg
    13921 tagccggtcg ggctcggaac cgacaaaagc cggccaagca cgtccttcag gtaatcgagg
    13981 ttaatcgtcg ggctcattct tcgtcttgcc tcgcttgcgg gcccgctcgg gcctgctgag
    14041 tgggaacaac aggtcgatga aacgctgggc ggtcggctgc ggttcgtggt tggcgagccc
    14101 gggccgctcg ttggcttcga tgaagacatg gtcgggaagc gacacgctgg ggacgatgaa
    14161 atcgacgccg acgaccggga tgtcgattgc ccgggcgacc tgcaccgccg actccgccag
    14221 ccgagggtgg attaccccgg tcacgtcgtg gatggtcccg cccgtgtgca ggttggccgt
    14281 tttccgaact gcgaaacttt tgccgctctc ggggacatcg tcgagcgtgt aacctgcgcg
    14341 tccgaccgac cgcacggtct cgacgtcgag cgggatgatg gattctccgc cagtcgccgc
    14401 cgaacggcgg cgcgactggc gctcgatcag ctcgcggacg gtgtgccggc cgtctccgac
    14461 caccgtcgcc ggccgccgta tcgccgcagc aacgaccttg aagccaatga cgatgatccg
    14521 aaggtcgtcg ccgggatggt agctttcgac cagcacccgg tccgattgcg ccgacgccct
    14581 tttgatcgct gcggtgacct cgcgcatgct ggtgaggtcg acggcaacgc cgcgtccctg
    14641 ctctccgcga gctggcttca ccacgaccga tttgtgcttc cggagaagct tgcgaacgcc
    14701 atccaggtcg tccgactcca cctcgtcggg gacattcacg ccggcggctt tcacgatccg
    14761 ccgggtcatc cccttgtcgt cgcagatcga cagcgcaacg gcggtcgtca ggtcgcagag
    14821 cgattcgcgg cagcggattc ggcggccgcc gaggcggagc tcgaacagcc cgccgtcggc
    14881 gtctagcacg tcaacgtcga taccgcgtcg ccgcgcctcg tcgatgatga tccgggcata
    14941 agggttcatc gcctcggccg ggtcggaacc gacgaacagc cgctcgttga tgacattgcg
    15001 gcgcttgact gtgaacagcg gcatccggtg gaaaccgagc ttgtcgtaca gcgcgatcgc
    15061 cccctcgttg tcgtgcatta ccgacaggtc catgtaggcg gcgccgcggg tctggtaatg
    15121 ctctgcgagc cagcggacga gcacttcacc gacgcgcgca tgcggggtct gcggatcgac
    15181 agccagcgcc cacagcgacg agccttcgac atcgtcgaac gcgatcgaat gatcgatccc
    15241 cgtcaccgtc ccgatgatgt cgcccgtttc ggcatcctcg gcgacgaaat aggtcagcag
    15301 ccggcggtca tccttgttct gctcttcgaa gaagtctggc ctgacctgga ccatgttgtg
    15361 cgccgaatag atgcggttga ccgcgtcggc gtcattctcc gggatcatcc gccggacgaa
    15421 gaagccggac ggccgccgct tcgacggccg ataggtgttg aggttgagcc ggtaggtgtg
    15481 ggacgggtcg aggaacagct cggccggagc agcggcgaga agcacgtgcg ggtcggtcac
    15541 atacatggcg atgtcgcgct gctcgtcgcc ctcggcgcga agctcgctca gcagcttttc
    15601 cgcgctttcg aacgtctggg cgaacagcac tcgcccccag cctacgtcga cgcaggcgtt
    15661 ccttcgcggc tgcggcgcag tcgggttgtt aagataggga aacagcggct cggcgcgcgg
    15721 agtccggggc gaacgggcca tcagccgaca ccgtgcttct gaagccacaa ttccagtagg
    15781 ccgacctgcc acagctccga gccgcgcagc ggcgtgatgt gcgccttggg gtcggcgaac
    15841 agcgagtcga gatagtcctg agtgaacagc ccgcgttcac gcgcggcagc gctcgacagc
    15901 gcatcctgga cgagagtcaa atagggcccc tggatatatt tgagcgcagg gaccgggaaa
    15961 tagcccttgg gccggtcgat cacctcactg gggatcacgt cgcgggcgac gtccttgagg
    16021 attcccttgc cgccctgcgc cagcttcagg ccggccggga tccgcgccgc cagttcggtc
    16081 aggtgatgat cgaggaacgg gacccgggcc tcgagtcccc aggccatggt catattgtcc
    16141 acgcgcttca ccgggtcgtc gaccagcatc accgtcgaat ccagccgaag cgccttgtcg
    16201 accgggtcgt ccgctcccgg ccttgcgaaa tgctcgcgga gatatttcag cggcgcctcg
    16261 ccgccattgc gccattcgga cccgagatgg ctgttcagct tgtcggcgcc gcggtcgaag
    16321 aaggcgcgcg cataggccga aaccggatcg ttggctgcct gcatcggcgg gtaccagtga
    16381 tagcctgcga aaatctcgtc ggcgccctgc cccgactgca ccaccttgat gtgcttcgcg
    16441 acctcgcggc tgagcaggta gaaaccgata ttgtcgtagg aaaccatcgg ctcgctcatc
    16501 gcctcgatgg tgtccggcag gtgctcgagc aactcttccg acgggatgaa gatcttgtgg
    16561 tgatcggtcc cgtaatggtc cgcgatcagg tccgaataga cgaattcgtc gcccttctcg
    16621 ccatgcgctt cctcgaagcc gatggaaaag gtggacaggc cggtctggcc aagctcggcg
    16681 agaagcccga cgatcaggct cgaatccacg ccccccgaaa gcagcacccc gaccggaacg
    16741 tcggcgacca tccgccgctt caccgcgacc cgtaggcact cgtgaaggcg ctcttcccaa
    16801 tccgccttgc ttcgagccgc gtcgccgtcc tgcggcccga acggcgggtt ccaatagcaa
    16861 gtgtcggtga agcggccgtc ctcttcatag actcggacgg tcgccggagg cagctttcga
    16921 actccgttta ggatcgtaag cggcggggga acgaccgcgt gccagctcat gtagaagtgc
    16981 agcgccgttc ggtcgatcga ggtgtcgacg tcgcccgcgg cgacgattcc gggaagagtg
    17041 gacgagaacc gcagccgctt gccgatatgg ctgtaataga gcggtttgat cccgtagcgg
    17101 tcgcggccga gcaccacgcg cccgctctcc cgctcgtgga tggcgaaggc gaacatgccc
    17161 ttgaagcgct tcacgcagtc ggcgccccaa gcgtggtacg ccttgaggat cacctccgtg
    17221 tcgccgtccg agaagaagcg gtagcccttc ccttccagct cggcgcgaag ctcgcggtaa
    17281 ttgtagatgc agccgttgaa gacgaggtcg agcccaagct ccgcatcgac catcggctgg
    17341 gccgaatgaa aggacaggtc gatgatcttg agccgctggt ggcccattcc gacgcggccg
    17401 cgcatcactt ggccgcaggc gtcgggcccg cgccgcgcct ggctccgcat catcgccgca
    17461 accgcgccgg cgtcggcgat cgcgccgtcg aagcggacct ctcccgctat tccgcacatg
    17521 cgcgggtccg tggccccgaa cgggcataaa cctgtgtcaa ttcagcgatc cctgtccgat
    17581 agcttgtcgg acccggaacg tccaattttg ttcccgctcc ttgcctccgc ccgttcgtcc
    17641 ccgcattgac gccggtgaag gtgacgaaat gaaaacgacg caactcctca actatgagcg
    17701 cgaccgctgg atcgcgggcc aggacggcct gtccgagctc cccagcgcca tcgacggctc
    17761 gccggtggcg atcgccggct ccggcggcct cgatttcgga gcaatgctcc ggcacgcgcg
    17821 cgaagtcggc ggccctgcgc tcagcaagat gacgtttcac gaacgcgcgc ggctcctcaa
    17881 gggcctcgcc ctcgcgatca tggaccgcaa ggaagagctc tacgaactga gttaccagac
    17941 cggcgcgacg cgcaaggacg gctggatcga catcgagggc ggcgccggca cgcttttctc
    18001 cttctcctcg aaaggccgcc gtgagcttcc agacgcacat gtgctcctcg acgggccgct
    18061 cgagcccctg tcgaagggcg gcagcttcgt cggccagcac atctacacct cgatgcaggg
    18121 cgcggcggtg catatcaacg ctttcaattt cccggtgtgg gggatgctcg agaagctggc
    18181 gccgacgctc ctcgccggag tgcctgcgat cgtgaagccg gcgtcggcga cctcttacct
    18241 caccgaagcc gcctttcggg tgatgatcga aagcgggctg ctgccagccg gtgccgtcca
    18301 gctaatcgtc ggctctgtcg gcgacctgtt cgaccatttg accggccagg acgtggtcag
    18361 cttcaccggc tccgcgtcca cggcctacaa gcttcgaacc cacccgaccg tgatgcgcga
    18421 gagcgtcaag ttcatcgctg agcaggacag cctcaacgcc tcgatcctgg ggcccgacgc
    18481 ggcgcccggc tcacccgaat tcgacctgtt cgtccgcgaa gtcgcgatcg agatgacggt
    18541 gaaggcgggg cagaagtgca ccgcgatccg ccgggcaatc gcgcccgccg agcatatgga
    18601 tgccgtcgag gaggcgcttc gcgaccgcct cgctaagatg acgctcggca atccccggtc
    18661 cgaggacact cggatgggcg cactggtgag cctctcccaa tgcaaggacg tgcgcgagaa
    18721 gatcgccgag ctcgaggccg ccggcgctcg gatcgtcgcc ggcgatcccg acgccgagcc
    18781 gccggtgaag gggggatcgt tcctccagcc gatcctgctt cgaagcgacg agccgtggaa
    18841 caacgaggcc gttcacgacg tcgaaccctt tggcccggtt tcgacaatca tgccctacaa
    18901 ggacctcgac gacgccatcg ctctcgccaa tcgcggcaag ggcagcctgg tcctgtcgct
    18961 cttcacccat tcgcccgacg ccgcgcgcga cttcgtccgc ggcaccgcct ccttccacgg
    19021 tcggatgctg gtgatcgacc gcgacaacgc cagggaatcg accggccacg gctcgccgct
    19081 tccggtcctg gtccacggcg gcccgggccg cgccggcgga agcgaggaga tgggcggggt
    19141 tcgcggcgtc aaacattaca tgcagcgaac cgctctgcag acctcgccgg cgatggtcgc
    19201 cgcgatcacc gggcaatatg tcgccggcgc gcccaagcac gtcatcgacg ctcacccctt
    19261 ccggctgaaa atgagcgaac tcaacgtcgg cgatacctgg gtaaccggca gccgcacggt
    19321 gacgatcgag gacatcgagc atttcgccga gttcaccggc gacaaattct acgcccacat
    19381 ggatgaggaa gcggccaagg cgtcgccgat cttcgagggc cgcgtcgccc acggctatct
    19441 gatcctcagc ttcgcggccg gcctgttcgt cgatcccgat ccgggcccag tgctcgccaa
    19501 caccggcctc gagaacctgc gtttcctgac cccgctctat cccggcgatt cgatgcgggt
    19561 cgagctcacc gtcaaggcca agtcgatcaa gaccgaggag acaggacagg tccgctgggc
    19621 cgtcgacgtc ttcaaccagg atgacgaact ggtcgccact tatgaccttc tgaccgagaa
    19681 cgtcccctaa gtggcggaac ggcggtctcc cgccagtcgt ttttgcaagc gaaaccttga
    19741 agggagacag gcgatgaaag tcagcgaagt catgacccgc gatgtgaaga cggtgcggcc
    19801 caaccagacc acgagggagg cggccggctt catgctcagc gaggacaccg gctcgatccc
    19861 ggtcagcgac ggcgaccggc tggtcgggat gatcaccgat cgcgacatcg cggttcgcgg
    19921 agtggcgaag ggccacggcc cggataccct ggtgcgggac gtgatgaccg acgatgtcat
    19981 ctgcgcccgc gaaagcgacg atgtcgagga agtggcgacg aagatgagca aggagcaggt
    20041 gcggcggatg ccgatcatcg acgccagcga caaattgtgc gggatcgtca gcctcggcga
    20101 cctcagccgc gaagccgatg acgactgcgc cgagcgcgcc ctagagggcg tcagcgctcc
    20161 cggcgacaag catcagcagg gctgactcct agcgcttgcc caagtcgctg atcgcgctgt
    20221 cgatcagggc cgagtcggcc tccgcgtcga cctgctcggc gatcagccgg gcggcggcgc
    20281 ggctcgctgc atcggctgca gccgcgcgca gctgctggac ggcggcgcgc tcctcggcgg
    20341 c
//
LOCUS       DATAKH010000236         3149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_27249,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000236 DATAKH010000000
VERSION     DATAKH010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27249"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VHN55_10180"
     CDS             complement(<1..488)
                     /locus_tag="VHN55_10180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010163460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX2804329.1"
                     /translation="MDFELTQRQAHFRDRVRAFVEEQVRPRLGDFHREHETGDRWQPL
                     RVIEELKPRAKEAGLWNLFMPPAPAVPMVDDSFIFEGEQLTNLEYALCAEEMGRIPWA
                     SEVFNCSAPDTGNMEVLHRYGTREQKEKWLSPLMRGEIRSAFLMTEPGVASSDATNIE
                     CS"
     gene            complement(529..960)
                     /locus_tag="VHN55_10185"
     CDS             complement(529..960)
                     /locus_tag="VHN55_10185"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX2804330.1"
                     /translation="MFHRLAGLATARPMRELPPYARLLGLRFEDQGDGSPLVIMPFRD
                     DVVGRPGYLHGGAIAGLLEFAAFSTLARELGDDSVVMKPVTVTVDYMRPGLDGDTFAA
                     AIVERLGATIANVEAFAWQEERDQPIASARLNFLLDRPQPS"
     gene            1009..1248
                     /gene="purS"
                     /locus_tag="VHN55_10190"
     CDS             1009..1248
                     /gene="purS"
                     /locus_tag="VHN55_10190"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017182327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEX2804331.1"
                     /translation="MKARVFITLKPGVLDPQGKAIHHALEGLGFSGVNDVRAGKLIEL
                     DIDDGTSNSDIEEMCRKLLANTVIENFRIERESQG"
     gene            1245..1910
                     /gene="purQ"
                     /locus_tag="VHN55_10195"
     CDS             1245..1910
                     /gene="purQ"
                     /locus_tag="VHN55_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEX2804332.1"
                     /translation="MKTAVIVFPGSNCDRDLAVALEQVTGRAPAMVWHRDSELPEGTD
                     FVGIPGGFSYGDYLRSGAMAARSPIIRAVVDAANRGVPVLGICNGFQVLTETGLLPGA
                     LMRNAAISFVSRAVALTVENSQTLFTSGYQQGETIRIPVAHHDGNYQADEATLDRLEQ
                     TGRVAFRYAEEVNGSARQIAGIVNDAGNVLGLMPHPERAIEPAHGSTDGRRLFEGLLE
                     TVA"
     gene            1953..2029
                     /locus_tag="VHN55_10200"
     tRNA            1953..2029
                     /locus_tag="VHN55_10200"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1987..1989,aa:Arg,seq:tct)
     gene            2061..2528
                     /locus_tag="VHN55_10205"
     CDS             2061..2528
                     /locus_tag="VHN55_10205"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804333.1"
                     /translation="MASTRAQRQRAIVDLLRENSPLTHEDISARLTSAGHQVSRATVS
                     QDLEQIGAVKMKRGPHLGYALPDQVSERDRSGTRLQRIFGEWVQSIDTAANLIVVRTP
                     PGSAGLVCLALDQAKLPEIVGTIAGDDTLFVAVRSGLPTEPLVQRLREFVELG"
     gene            complement(2525..>3149)
                     /locus_tag="VHN55_10210"
     CDS             complement(2525..>3149)
                     /locus_tag="VHN55_10210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX2804334.1"
                     /translation="LEHIPGTRAPLEKAHPWNVLIEATSDSPDGDPVELLQELLAGAI
                     EGGLVDDATVAASEAQAEALWRIRDSISEAERAEGPSTAHDISVAVADMPAFLLDAKA
                     AVESAFPGTVASAFGHLGDGNLHFHVRAPSRASREWIEREGPEITRFVDDLVTAAGGS
                     ISAEHGIGQMKRGELERLAAPGDLAALRAIKQALDPNGLMNPGKLVG"
BASE COUNT          550 a         1064 c          990 g          545 t
ORIGIN      
        1 atggagcatt cgatgttggt cgcgtccgac gaggcgactc ctggctcagt catcaggaag
       61 gcggagcgga tttcgccccg catcaggggg ctgagccact tctccttctg ctcacgcgtg
      121 ccgtagcggt ggagcacttc catattgccg gtgtcgggag ccgagcagtt gaagacctcg
      181 ctcgcccagg gaatccgccc catttcctcg gcgcacagcg catattcaag gttcgtcagc
      241 tgctcgcctt cgaagatgaa gctgtcgtcg accatcggca cggcgggcgc aggcggcatg
      301 aacaggttcc ataagcccgc ctctttcgcg cgtggcttca gttcctcgat gacccgcagc
      361 ggctgccagc ggtcgcccgt ttcatgttcc cggtgaaagt cgccgagccg cggccggacc
      421 tgctcctcca cgaacgcccg gacgcggtcg cggaaatggg cctggcgctg ggtgagctcg
      481 aagtccacgg cccaagcgct gccagaatcc gcgtccgtgc gccagtggtc aggagggttg
      541 cgggcggtcc agcaggaagt tcagccgcgc gctcgcgatc ggctggtcgc gttcttcctg
      601 ccaggcgaac gcctcgacat tggcgatggt cgcacccagc ctttcgacaa tcgcagccgc
      661 gaaagtgtcc ccgtcgagcc ccggccgcat ataatcgact gtcacggtaa ccggcttcat
      721 caccaccgaa tcgtcgccca gctcgcgcgc cagggtgctg aaggcggcga attcgagaag
      781 ccctgcgatc gccccgccat gcaggtagcc cggccgcccg acgacatcgt cgcgaaacgg
      841 catgatgacc agcggcgagc cgtctccctg atcctcgaac cgcaggccca gcagcctggc
      901 atatggcgga agctctcgca tcggccgggc agtagcaagt ccggcaaggc ggtgaaacat
      961 tgtcggccac cttgccgcaa gatgcgttcg gggccatagg cgcggcgcat gaaagcacgc
     1021 gtcttcatca cgcttaaacc cggagtcctc gacccgcagg gcaaggccat tcatcacgcg
     1081 ctcgaaggcc tcggcttttc cggcgtcaac gacgtccgcg ccggcaagct gatcgagctc
     1141 gacattgacg acggcaccag caattcggac atcgaggaga tgtgccggaa gttgcttgcc
     1201 aacaccgtca tcgaaaattt ccggatcgag cgggagtcgc aggggtgaaa accgccgtca
     1261 tcgtctttcc cggctccaac tgcgaccgcg acctcgccgt cgcccttgaa caggtcactg
     1321 gccgagcccc ggcgatggtc tggcaccgcg atagcgagct acccgaaggc actgacttcg
     1381 tcggcatccc cggcggcttc tcctacggcg actacttgcg ctcaggagcg atggccgccc
     1441 gttcaccgat catccgtgca gtcgtcgatg ccgccaatcg aggagtgccc gtgctgggca
     1501 tctgcaacgg cttccaggtg ctgaccgaga cggggctgct tcccggcgcg ttgatgcgca
     1561 acgcggcaat cagcttcgtt tcgcgcgccg tcgccctgac ggttgagaac agccagacgc
     1621 tcttcaccag cggttaccaa cagggcgaaa cgattcggat ccccgtcgcc caccacgacg
     1681 gcaactacca ggccgacgaa gccactctcg accgattgga gcagaccggc cgcgtcgcct
     1741 tccgttatgc ggaggaggta aacggctccg cgcgtcagat tgccggaatt gtcaacgatg
     1801 ccggcaacgt ccttgggttg atgccgcatc cggaacgggc aattgagccg gcgcacggga
     1861 gcaccgacgg cagacgcctg ttcgaaggcc ttctcgaaac cgtcgcctga gacgctgtca
     1921 tcgacagcgc atttcgatac agtggcagcc acgcgcccgt agctcagttg gacagagcac
     1981 gagccttcta agcttggggt cgcaggttcg aatcctgccg ggcgcgccac gttattagtc
     2041 cattttggag tgaattattg atggccagca ctcgcgcaca acggcagcgc gcaatcgtcg
     2101 acttgttgcg ggaaaactcg cccctcaccc atgaggacat cagcgccagg ctgacatccg
     2161 cgggccacca ggtaagccgg gccaccgtct ctcaggacct ggagcagatc ggcgcggtga
     2221 agatgaagcg cggcccccat cttggctatg cgcttcccga ccaggtgtcg gagcgggacc
     2281 gctcgggaac ccggctccag cgaatcttcg gtgagtgggt gcagtccatc gatactgccg
     2341 cgaacctgat cgtcgtccgc actccgcccg gatccgccgg cctggtgtgc ctcgccctcg
     2401 accaggcgaa gctgcctgaa atcgtcggca ccattgccgg agacgacacc ttgttcgttg
     2461 ccgtccgcag cggccttccg accgagccgc tcgtccagcg gctgcgggaa ttcgtcgaac
     2521 tcggctaacc gaccagcttg ccggggttca tcaggccatt cgggtcgagc gcctgcttga
     2581 tcgcccgaag cgccgcgaga tcgccgggag cggcaagccg ctcgagctcg ccgcgcttca
     2641 tctggccgat tccgtgctcg gcggagatcg agccgcccgc ggccgtgacc aggtcgtcga
     2701 caaagcgtgt gatctcgggc ccttcccgtt cgatccattc ccgcgatgca cggcttgggg
     2761 cccggacgtg gaagtggaga ttgccgtcgc cgaggtggcc gaaggcgctt gcgacggtgc
     2821 ccgggaatgc gctttcgacc gccgcctttg cgtcgagcag gaacgccggc atgtcggcca
     2881 ccgcaaccga gatatcgtgc gcggtggatg ggccctccgc ccgctccgct tccgaaatcg
     2941 agtcgcggat ccgccacagc gcctccgcct gagcttctga ggccgcgacg gtcgcgtcgt
     3001 cgacgagccc gccctcgatc gcgcccgcga gaagttcctg aagaagctcg actgggtcgc
     3061 cgtcgggcga atccgatgtc gcctcgatca gcacattcca cggatgcgcc ttctcaagcg
     3121 gcgcgcgagt gccggggatg tgctcgagc
//
LOCUS       DATAKH010000237         2417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_30574,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000237 DATAKH010000000
VERSION     DATAKH010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30574"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..303)
                     /locus_tag="VHN55_10215"
     CDS             complement(7..303)
                     /locus_tag="VHN55_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011445630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEX2804335.1"
                     /translation="MTAAPPYIAAMHPDAELKRLRWRAHHRGTYESDLLVGSFFDAHH
                     GSWDSADRATFAMLLEEQDVDILAWASGTAQAPERYQGPMLEALQKLDYIPIRR"
     gene            339..2399
                     /gene="recG"
                     /locus_tag="VHN55_10220"
     CDS             339..2399
                     /gene="recG"
                     /locus_tag="VHN55_10220"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010338015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEX2804336.1"
                     /translation="MRPDVLNPLFAEVETLPGVGPQVAKLLKRLDITRAIDLLYHLPT
                     GVIERVRAPAANASLVGRNVILDLKPFQTREPRSGRGPMRVFASDSNGNTISLVYFNN
                     PGWAKKSLPMDSVRTVSGKLEQYGDEWQIIHPDVSEPGKGPQPAIREPVYPLTEGITN
                     KRMRELAGEAAGRAPELPEWIEPSLAAREAWRPWRSAIAEAHQDPYATDPRRRLAYDE
                     IFANQLALLLLRQAARRNRGVPLVGTDKLISNLNLPYEHTAAQRRVIAEIRGDMEQSV
                     PMLRLLQGDVGSGKTLVATEAMLIAVEAGAQAALLAPTEILARQHFDTLTKQLTSLGV
                     HVAILTGREKGRARESVLMGLADGAIDILVGTHAIFQEKVGYKKLGLAVIDEQHRFGV
                     SQRLLLAQKAERPPHLLVMTATPIPRTLTLTQYGEMDVSRIDEMPPGRTPIETRVISE
                     EKLGDVIAGVGRHIDGGGQAYWVCPLVEESEKSDAAAAEERARVLRTRFGDGKVGLVH
                     GRMKGPEKDAVMAAFASGDLAVLVATTVIEVGVDVPNATLMVVEGAERFGLAQLHQLR
                     GRVGRGSGKSTCLLVRGTSLTETGRARLALMRETNDGFRIAEEDLRLRGPGEILGTRQ
                     SGEEGFRVARPEDVEDLAPIAQSDAQLLLDRDGGLAAPRGQAAQVCLYLFERDQAVGL
                     IRSG"
BASE COUNT          436 a          763 c          840 g          378 t
ORIGIN      
        1 gctcgctcat cggcggattg ggatgtaatc cagcttctgc agcgcttcga gcatcggtcc
       61 ttggtagcgt tccggagcct gagcggttcc ggatgcccag gcgaggatgt ccacgtcctg
      121 ctcctccagc agcatcgcga acgtcgcgcg atccgccgaa tcccacgatc cgtggtgagc
      181 gtcgaagaag ctgccgacca gtagatccga ctcataggtg ccgcgatggt gcgcgcgcca
      241 gcgaaggcgc ttcaactcag cgtcgggatg cattgccgcg atgtagggcg gggccgccgt
      301 cattgcgagc gcggattctg gcgctaacac ccgtctcgat gcgtcccgac gtcctcaacc
      361 cgctgtttgc cgaggtggaa accctgccgg gcgtcgggcc gcaagtggcg aagttgctga
      421 agcggctgga cattacacga gccatcgacc tgctttacca ccttcccacc ggagtgattg
      481 agcgagtgcg ggcgcctgcg gcgaatgcct cgctggtcgg ccgcaacgtc attctcgacc
      541 tgaagccgtt ccagactcgc gaaccccgct ccgggcgcgg cccaatgcgc gtgttcgcgt
      601 cggactcaaa cggcaacacg atcagcctcg tctatttcaa caatccggga tgggcgaaga
      661 agagccttcc gatggactcg gtgcggactg tctccggcaa gctcgagcaa tatggcgacg
      721 aatggcagat catccatccg gacgtgtcgg agccgggtaa gggaccgcaa ccggcaatcc
      781 gcgagccggt ctacccgctg accgagggca ttaccaacaa gcgcatgcgc gaacttgccg
      841 gggaggcggc cggacgcgct cccgagcttc cggagtggat cgagccgagc cttgccgccc
      901 gcgaggcgtg gcgaccgtgg cggtccgcga tcgccgaggc tcatcaggat ccctatgcga
      961 ccgacccccg ccgccgcctc gcctatgacg aaattttcgc caaccagctt gcgctgctgc
     1021 tgctgagaca ggcggcgcgg cgtaaccgcg gcgttccgct ggtcggaacg gacaagctga
     1081 tttccaacct gaatctgccc tacgagcaca cggcggcgca gcgacgggtg atagcggaaa
     1141 tccgcgggga catggagcag agtgttccaa tgcttcggct gctccaaggc gacgtcggct
     1201 cagggaagac gttggtcgcg accgaggcga tgctgatcgc tgtcgaggct ggagcgcagg
     1261 cggcgctgct ggcgccgacc gaaatcctcg cgcggcagca cttcgacacg ctgaccaagc
     1321 agctcacatc gctgggcgtg cacgtcgcca ttctcaccgg acgggaaaag ggcagggcga
     1381 gggaaagcgt gctgatggga ctggcggacg gggccatcga catcctcgtc ggcacccacg
     1441 cgattttcca ggagaaggtc ggctacaaaa agctcggcct tgccgtaatc gacgagcagc
     1501 accggttcgg agtgtcgcag cggctgcttt tggcgcagaa agccgagcgg ccgccgcacc
     1561 tgctggtgat gaccgcgacc ccgatcccgc ggacccttac gctgacccaa tatggcgaga
     1621 tggacgtcag ccggatcgac gagatgccgc cggggcggac tccgatcgag acgcgggtga
     1681 tcagcgagga gaagctaggt gacgtgatcg cgggcgtggg acgccacatc gacggcggcg
     1741 gccaggccta ttgggtctgc ccgctagtcg aggagagcga gaagagcgac gccgccgccg
     1801 ccgaggaacg ggcacgggtg ctcaggactc gcttcggcga cggcaaggtc gggctggtcc
     1861 acggacggat gaagggtccg gaaaaggacg cggtgatggc cgcctttgcc agcggcgatc
     1921 ttgccgtgct ggtcgcaacg accgtcatcg aggtcggggt cgatgtgcca aacgcgaccc
     1981 tgatggtggt cgaaggcgcc gagcgcttcg gccttgccca gctccaccag cttcgcggcc
     2041 gcgtcgggcg cggctcgggg aagagcactt gcctcctggt ccgcgggacc agcctgaccg
     2101 agacagggcg ggcgcggctg gcgctgatgc gcgagaccaa cgatgggttc cggatcgccg
     2161 aggaggatct gcggcttcgc ggtcccggcg aaatcctcgg cacgcgtcag tcgggcgaag
     2221 aaggattccg ggtcgcaaga ccggaggatg tcgaagacct ggcgccgatc gcgcaaagcg
     2281 atgcgcaatt gctgctcgac cgcgacggcg ggctggccgc tccgcgcggg caggcggcgc
     2341 aggtctgcct ctacctgttc gagcgcgacc aggcggtcgg gctgatccga tccggctgac
     2401 aaggagaatc caatggc
//
LOCUS       DATAKH010000238         3900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_6210,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000238 DATAKH010000000
VERSION     DATAKH010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3900
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6210"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..2002
                     /gene="dnaG"
                     /locus_tag="VHN55_10225"
     CDS             164..2002
                     /gene="dnaG"
                     /locus_tag="VHN55_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007714682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEX2804337.1"
                     /translation="MTLSTQWLDELRARTLLSTVIAPHVKLIRAGREFKACCPFHNEK
                     TPSFTVNDDKGFYHCFGCGAHGDVIRFLTDHRGLPFMDAIKELAAKAGMDVPAPDPAA
                     RERAERAASLTDVMASCQKWFAEQLQGVNGAAARDYLKSRGIDSGQVARFGIGLAPDS
                     RNALKRALSSLGEDKLVETGMLIQPDEGEPYDRFRGRLMIPIRDQRGRVIGFGGRILG
                     EGEPKYLNSPDTPLFDKGRTLYNIDRAGPASRQAKRLVVVEGYMDVIALDRAGVAEAV
                     APNGTAVTEAQLERMWRLDPAPILCFDGDSAGQKAAIRAALRALPHIAPERTLRFVEL
                     PPGQDPDDIVRAGGREAVEELLAEPEPLDQRLWRHERDSAPLTTPEARAGLRQRLVEH
                     SQAIGDPELRRLYRDQWLARFDSEFGSVRRPFSARPQNRFDKRSGKWVAPALPASDTA
                     RRIGRSGIDTATARALVLGFALYPEALPEHMEQLAHLPIADRPLSALRDRIVDAALAE
                     APLDRQKLATILQQAGAAAALEQARRAGGIGFSFTRSDTDPQRAVRDLGVAIDALAAD
                     EEIGAALDEATERLKAGETQAFEDQLRLHSARKDIKQRLASLVGTE"
     gene            2017..>3900
                     /gene="rpoD"
                     /locus_tag="VHN55_10230"
     CDS             2017..>3900
                     /gene="rpoD"
                     /locus_tag="VHN55_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEX2804338.1"
                     /translation="MAKNETAEPEAQDSGDAPLIDLNDASIKKLIARAKKRGFVTYDE
                     LNEALPQDQMASEQIEDIMSAINEMGINVVENEEEAEDDSDDDKEAAAKEAEVDPLDD
                     GGPRPAAATKKEPTDRTDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRDTMIWGLC
                     ESPMTFNAIIDWSNNLNEGTMQLREILDLDAMLSKGPTAEQIAESEEGAEGGDKDEIS
                     EKTAGPTIKEEEDEPEEASADGDDEEDMVERRAKPQSSDDDDDENALSLAQMEEQLKP
                     HALEKFATITSLFKKFAKLQSARLDAFAAGQDFPDKDEKKYQKLREQLTAEVESVQFH
                     QAKIEYLVDQLYAYNRRLMALGGQMLRLAERHRVPRRSFLEQYSGHELDENWLDEVKG
                     IDKKWASFASAEADTVERIRGEIGEIAQGVGTSLPEYRRIVNQVQKAEREARMAKKEM
                     VEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQ
                     AITRSIADQARTIRIPVHMIETMNKLVRTGRQFLHETGREATPEELAKEMDMPEDKIR
                     KVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAVIPVDAAIQSNLKETVTRVLASLTP
                     REER"
BASE COUNT          776 a         1387 c         1220 g          517 t
ORIGIN      
        1 ggtgccaccc tgtttcggaa ccgcaacgat gataacccgc cttggcccaa tccccgcggt
       61 taaatattca cccgcacggc gcttcgcctc gggaggatat gcgagctgtg gataagtcgg
      121 ggttgccgct tgcgggtggg ccgccgcgtg gcaaagtgat tcgatgaccc tctcgacaca
      181 gtggctggat gagcttcgcg cccggaccct gctgtcgacc gtcatcgccc cgcacgtgaa
      241 gctgattcgc gccggccgcg aattcaaggc gtgctgcccg ttccacaacg agaagacacc
      301 cagcttcacc gtcaacgacg acaagggctt ctaccattgc ttcggctgcg gcgcccacgg
      361 cgacgtgatc cgcttcctga ccgaccaccg cgggctgccg ttcatggacg caatcaagga
      421 gcttgcggcc aaggctggaa tggacgtccc cgcgcccgac ccggcggcca gggagcgcgc
      481 cgagcgcgcc gcatcgctga ccgacgtcat ggcgtcgtgc caaaagtggt tcgccgagca
      541 gctgcagggc gtcaatggcg ccgcggcccg cgactatctc aagagccgcg ggatcgattc
      601 cggtcaggtc gcccggttcg gaatcggcct cgccccggac agccgcaatg cgctcaagcg
      661 cgccctctcg tcgctcggcg aggacaagct ggtcgaaacc ggcatgctga tccagcccga
      721 cgagggcgag ccctacgacc gcttcagggg ccggctgatg attcccatcc gcgatcagcg
      781 cgggcgggtg atcggcttcg gcgggcggat cctgggcgaa ggcgagccca aatatctcaa
      841 ctcccccgac acgccgctct tcgacaaggg ccggaccctc tacaacatcg accgcgccgg
      901 ccccgccagc cgccaggcga aacggctggt cgtcgtcgag ggctatatgg acgtgatcgc
      961 cctcgaccgc gccggagtag cggaggccgt agcccccaac ggaaccgccg tcaccgaggc
     1021 ccagctcgaa cgcatgtggc ggctggaccc cgcgccgatc ctctgcttcg acggcgacag
     1081 cgcggggcag aaggccgcga tccgcgccgc tcttcgcgca ctcccccata tcgcgcccga
     1141 gcgcaccctg cgtttcgtcg agctcccgcc cggccaggac cccgacgaca tcgtccgcgc
     1201 cggcggccgc gaggcagtcg aagagctcct tgccgagccc gaaccgctcg accagcgcct
     1261 gtggcgccac gagcgcgact ccgccccgct gacgacgccc gaagcccgag ccggccttcg
     1321 ccagcgcctc gtcgagcaca gccaggcgat cggcgatcct gagctccgcc gcctctaccg
     1381 cgaccagtgg ctggcccgct tcgactccga gttcggttcc gtccgcaggc ccttctccgc
     1441 ccgcccgcag aaccgcttcg acaagcgcag cggcaagtgg gtcgcgccgg cgctcccggc
     1501 cagcgacaca gcccgccgga tcggccgctc gggcatcgac accgcgaccg cccgggccct
     1561 tgtcctcggc ttcgcgctct accccgaggc gcttcccgag cacatggagc agctcgccca
     1621 cctgcccatc gccgaccgcc cgctctcggc ccttcgcgac cgaatcgtcg acgcggccct
     1681 tgcggaagcg ccgcttgatc gccagaagct cgccaccata ttgcagcaag ccggagcggc
     1741 cgcagccctg gagcaggcgc gccgagccgg cggaatcggc ttttccttca cccgcagcga
     1801 caccgatccc caacgggcgg tgcgtgacct gggggtcgcg atcgatgcgc tcgcggcgga
     1861 tgaagagatc ggtgcggctc tcgacgaggc caccgagcgt ttgaaggccg gcgaaacaca
     1921 ggcgttcgag gaccagctcc ggctgcactc ggcgcgaaag gacataaagc aacggctggc
     1981 gtcactcgtc ggcactgagt aacggcgacc cgatttatgg cgaagaacga aactgcagaa
     2041 cccgaggccc aggacagcgg cgacgctccc ctgatcgatc tcaacgacgc gtcgatcaag
     2101 aagctgatcg cccgcgccaa gaagcgcggc ttcgtcacct acgacgagtt gaacgaggcg
     2161 cttccgcagg accagatggc gtccgagcag atcgaggaca tcatgtccgc gatcaacgag
     2221 atgggcatca acgtcgtcga gaacgaggaa gaggccgagg acgacagcga cgacgacaag
     2281 gaggccgcgg ccaaggaagc cgaggtcgac ccgctcgacg acggcggccc ccgccccgcc
     2341 gctgcgacca agaaagagcc gaccgaccgc accgacgacc cggtccggat gtaccttcgc
     2401 gagatgggcg cggtggaatt gctctcccgc gagggcgaga tcgcgatcgc caagcggatc
     2461 gaggccggcc gcgacacgat gatctggggg ctgtgcgaaa gcccgatgac cttcaacgcc
     2521 atcatcgact ggtcgaacaa cctcaacgaa ggcacgatgc agctccgcga gatcctcgat
     2581 ctagacgcga tgctgtccaa gggccccacc gccgagcaga tcgccgagag cgaggaaggc
     2641 gcggaaggcg gcgacaagga cgaaatctcc gaaaagaccg ccggcccgac catcaaggaa
     2701 gaggaggacg agcccgaaga ggcctccgcc gacggcgacg acgaagagga catggtcgag
     2761 cgccgcgcca agccgcaatc ctccgacgac gacgatgacg agaacgcgct ctcgctcgcc
     2821 cagatggagg agcagctaaa gccccacgcg ctcgagaagt tcgcgaccat cacgtcgctg
     2881 ttcaagaagt tcgccaagct ccagtcggcc cggctcgacg ccttcgccgc cggtcaggac
     2941 ttccccgaca aggacgagaa gaagtaccag aagctccgcg agcagctcac cgccgaggtc
     3001 gagagcgtcc agttccacca ggccaagatc gaatatctcg tcgaccagct ctacgcctac
     3061 aaccgccggc tgatggcgct tggcggccag atgctccgcc tcgccgagcg ccaccgggtc
     3121 ccgcgccgct ccttcctcga gcaatattcg ggccacgagc tcgacgagaa ctggctcgac
     3181 gaggtcaagg gcatcgacaa gaaatgggcc agcttcgcct ccgcggaagc cgacacggtc
     3241 gagcgaatcc gcggcgagat tggcgagatc gcccagggcg tcggaacctc gctccccgag
     3301 taccgccgca tcgtgaacca ggtccagaag gccgagcgcg aagcccggat ggccaagaag
     3361 gaaatggtcg aggccaacct ccgcctcgtc atctcgatcg ccaagaaata caccaaccgc
     3421 ggcctgcagt tcctcgacct gatccaggaa ggcaacatcg gcctgatgaa ggcggtcgac
     3481 aagttcgagt accgccgcgg ctacaagttc tcgacctacg ccacctggtg gatccgccag
     3541 gcgatcaccc gctcgatcgc cgaccaggcg cgcaccatcc gcatcccggt ccacatgatc
     3601 gagacgatga acaagctggt ccgcaccggc cgccagttcc tccacgagac cggccgcgag
     3661 gcgacgcctg aagagttggc gaaagagatg gacatgcccg aggacaagat ccgcaaggtc
     3721 atgaagatcg cgaaggagcc gatctccctc gaaacgccga tcggcgacga ggaggattca
     3781 cacctcggcg atttcatcga ggacaagaac gccgtcatcc cggtggacgc ggcgatccag
     3841 tcgaacctca aggaaaccgt cacccgagtg ctggcgtccc taaccccgcg tgaagagcgc
//
LOCUS       DATAKH010000239         2239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_34643,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000239 DATAKH010000000
VERSION     DATAKH010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34643"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1478)
                     /gene="yidC"
                     /locus_tag="VHN55_10235"
     CDS             complement(<1..1478)
                     /gene="yidC"
                     /locus_tag="VHN55_10235"
                     /inference="COORDINATES: protein motif:HMM:NF002353.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEX2804339.1"
                     /translation="MKETRNMILAVVLSALVLLGWSMLSERLLPTPAPQAQTTDRDEA
                     KPPATPQAGPVDASPKKVRARAQVIAESPRVAIQTPRLQGSINLKGARIDDLVLLDER
                     QTLAKDSPPVRLLSPAGSPRAYFASFGWTGEGVEVPGADSQWTASAPVLRPSQPVTLS
                     WSNETGQTFEIILGVDDNYLFTARQRVVNRGSGPVAVRPYGLINRADKSTDPDYWTVH
                     VGPIAFLDGAANYDVDWDSLEGGKTERFDSRGGWLGFTDSHWLTALAPAGNRPITASF
                     TGTPSGGFQADYAEQQQVVPAGAAVQNDTRLFAGAKEKAVLDRYEEAGIPKLSKSIDW
                     GWFEWFMRPIFDLLTWLFHATGNFGVAIICLTVIVRLLMFPIAQKQFKSMAAMRKVQP
                     KLKAIQARFKDDKARQQQEMLKLYKEEKINPAAGCLPILLQIPIFYALYKVLMVSVEM
                     RHQPFALWIKDLSAPDPLTPVNLFGLLDFTPPGFLHIGVLAIL"
     gene            complement(1475..1717)
                     /gene="yidD"
                     /locus_tag="VHN55_10240"
     CDS             complement(1475..1717)
                     /gene="yidD"
                     /locus_tag="VHN55_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004210035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEX2804340.1"
                     /translation="MISRLLIWICRAWQLGPSRMLPPSCRYQPSCSAYAITALSRYGA
                     LRGSWLALKRIGRCHPWGGHGYDPVPERISRGSARK"
     gene            complement(1714..2031)
                     /gene="rnpA"
                     /locus_tag="VHN55_10245"
     CDS             complement(1714..2031)
                     /gene="rnpA"
                     /locus_tag="VHN55_10245"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEX2804341.1"
                     /translation="MRKRSDFLAANAGRRAATPAFVLLVRDRGDGDSQIRIGFTVSRK
                     VGNAVARNRMKRRFRELAREIVPSHGYPGSDHVMIGRVGGVERDFAALRQDLRRALER
                     TAP"
     gene            complement(2037..2171)
                     /gene="rpmH"
                     /locus_tag="VHN55_10250"
     CDS             complement(2037..2171)
                     /gene="rpmH"
                     /locus_tag="VHN55_10250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEX2804342.1"
                     /translation="MKRTFQPSNLVRARRHGFRSRMATVGGRKVLNARRARGRKKLSA
                     "
BASE COUNT          391 a          711 c          743 g          394 t
ORIGIN      
        1 aggatcgcga ggaccccgat gtggaggaat ccgggcggcg taaaatcgag gagaccgaac
       61 aggttgacgg gggtcagcgg gtcgggcgca gacaggtcct tgatccacag cgcgaacggc
      121 tggtggcgca tttcgaccga caccatcagc accttgtaga gcgcatagaa aatcgggatc
      181 tgaagaagga tcggaaggca gccggcggcc ggattgatct tctcctcctt gtacagcttc
      241 agcatctcct gctgctggcg cgccttgtcg tccttgaagc gggcctgaat cgccttgagc
      301 ttcggctgaa ccttgcgcat cgccgccatc gacttgaact gcttctgggc gatcgggaac
      361 atcagcagcc ggacgatcac cgtcaggcag atgatcgcca ctccgaaatt gccggtcgcg
      421 tggaacagcc aggtgaggag gtcgaaaatc ggccgcatga accattcgaa ccagccccag
      481 tcgatcgact tcgatagctt ggggatgccg gcttcctcgt agcggtcgag gacggccttt
      541 tccttggctc ccgcgaacag gcgggtgtcg ttctggacag ccgcgccggc cgggacgacc
      601 tgctgctgct cggcataatc ggcttggaag ccgccgctgg gagtgcccgt gaagctcgcc
      661 gtgatcggcc tgttgccggc tggcgcgagc gcggtcagcc agtggctgtc ggtaaatccg
      721 agccagccgc cgcggctgtc gaagcgctcc gtcttgccgc cttccagact gtcccagtcg
      781 acgtcgtaat ttgcggcgcc gtctaggaac gctatcggcc cgacgtgaac ggtccagtaa
      841 tccgggtcgg tcgacttgtc ggcgcggttg atgagcccgt acggccggac tgcgaccggg
      901 cccgagccac ggttcacgac ccgctgcctg gcagtgaaga gataattgtc gtcgacgccg
      961 agaatgatct cgaacgtctg ccccgtttcg ttggaccagc taagcgtaac cggctggctc
     1021 ggacgcagga ccggcgcgct tgcggtccac tgggaatcgg cgccggggac ctcgacaccc
     1081 tctccggtcc atccgaagct tgcgaaatag gcgcgtggcg atccggccgg agacaacagg
     1141 cgaacgggcg gtgagtcctt ggcaagcgtc tgccgctcgt cgagcagcac caggtcgtct
     1201 atccgagcgc ccttgaggtt gatcgagccc tgcaacctgg gagtctggat tgccactcgc
     1261 gggctctcgg caatcacctg ggcccgggct cgaacttttt tcgggcttgc gtcgacaggt
     1321 cccgcctgcg gcgtcgcagg cggctttgct tcgtccctgt cagtcgtttg cgcctgcgga
     1381 gcgggcgtcg gaagcaggcg ctcggagagc atgctccagc cgagcagcac cagcgcgctc
     1441 agcacgaccg cgaggatcat gttccgggtt tctttcactt gcgcgctgat cctcgtgaaa
     1501 tgcgttcggg gacgggatcg tagccatgcc cgccccaggg atggcagcgg ccgatccttt
     1561 tcagggcaag ccagctccca cggagcgcgc catagcgcga taaagcggta atcgcatagg
     1621 ccgagcagga cggctgatag cggcagcttg gaggaagcat tcgcgacggt cccagttgcc
     1681 aggcgcggca gatccagatc agcaggcgcg agatcatggc gcggtccgct ccagcgctcg
     1741 ccgaaggtcc tggcgaagag ccgcaaagtc ccgctcgacg cccccgacgc ggccaatcat
     1801 cacgtgatcc gatcccggat agccgtggct cggcacaatt tcgcgagcga gctcccggaa
     1861 gcgccgcttc atgcggttgc gcgcgacggc gttgccgacc ttccggctga cggtaaagcc
     1921 gatgcgaatc tgcgaatcgc catcgccccg gtcgcggacg agaagcacga atgcaggcgt
     1981 cgcggcgcgc cgtccggcat tggccgcgag gaaatccgag cgtttccgga tcgtgactag
     2041 gcgctgagct tcttgcggcc gcgggcgcgg cgcgcgttca gcaccttgcg tccgccgacg
     2101 gtcgccatgc ggctccggaa cccgtgccgc cgcgcgcgga ccagattgct cggttgaaag
     2161 gtgcgcttca tcgctcatgc ctcaaaattc aaaagaaaaa gggccgccgc tggggcagcc
     2221 tccgttgcgc gcgccgata
//
LOCUS       DATAKH010000240        12372 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_30882,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000240 DATAKH010000000
VERSION     DATAKH010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 12372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12372
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30882"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1160)
                     /gene="ccsA"
                     /locus_tag="VHN55_10255"
     CDS             complement(<1..1160)
                     /gene="ccsA"
                     /locus_tag="VHN55_10255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013040071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEX2804343.1"
                     /translation="MIAEAGLAALWLAAALALLQMVLAFGPVRSGTAVRSVAIVEGGL
                     TLFAMTMLMILFARTDLSVLLVAENSHSAKPWVYKLAGAWGNHEGSMLLWVTVLGMAG
                     AVLAVFSRRMEERTLSAALGAQGALALGFFAFLLFSSNPFARLEPPAFEGRGLNPLLQ
                     DPGLVFHPPTLYLGYVGLSVAFSLAVGALLTGRVDSALAKAMRPWVLAAWILLTLGIT
                     AGSYWAYYELGWGGWWFWDPVENASLMPWLAATALLHSVNVLAARDSLRAWTVMLAMI
                     AFSMSMVGTFLVRSGILTSVHSFAVDPGRGTFLLVLLAIYVGAAFLLFALRSGKLAEG
                     PPFELVSREAALVGNNLLLTVILGIVFVGTLYPLFVEAVTGSKLSVGPPYFDS"
     gene            complement(1157..1603)
                     /gene="ccmE"
                     /locus_tag="VHN55_10260"
     CDS             complement(1157..1603)
                     /gene="ccmE"
                     /locus_tag="VHN55_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008830267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017003 - protein-heme linkage [Evidence
                     IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HEX2804344.1"
                     /translation="MVKPKHQRLVLIAVAVAAILAAVLLAMWGLRDRAAYFYTPAEIA
                     AGEAVVGKPIRLGGMVAEGSTERLADGVTIRFRIADGEAAVPVVYRGIVPDLFREGSG
                     AVAEGRLAADGTFVAHNILAKHDERYMPPELGNPAAEHKAAKTVEK"
     gene            complement(1596..1730)
                     /gene="ccmD"
                     /locus_tag="VHN55_10265"
     CDS             complement(1596..1730)
                     /gene="ccmD"
                     /locus_tag="VHN55_10265"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HEX2804345.1"
                     /translation="MNPWPFVIAAYAVSLLATAVLLVLSFASMRRAEAETDKLQRDDG
                     "
     gene            complement(1727..2443)
                     /gene="ccmC"
                     /locus_tag="VHN55_10270"
     CDS             complement(1727..2443)
                     /gene="ccmC"
                     /locus_tag="VHN55_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease CcmC"
                     /protein_id="HEX2804346.1"
                     /translation="MHALANPARFLRIARPATSWLLAVGLVLAIVGVAAGLTLTPPDY
                     LQGETVRIMYVHVPAAWLAMAGWAGIAAAAVTQLVWRHPLAAVAGRAIAPAGATFAAI
                     CLLSGSIWGRPTWGTWWEWDGRLTSMLILFFLYLGYIALAAAERERSGEGRVTAIFGI
                     VGAVNLPVIHYSVLWWRTLHQGQSIGLSGSTIDWSILWPLPLTFFGFTFLFAAAVLMR
                     MRAELARARVEARLRRASSE"
     gene            complement(2455..3504)
                     /locus_tag="VHN55_10275"
     CDS             complement(2455..3504)
                     /locus_tag="VHN55_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HEX2804347.1"
                     /translation="MKTPWGFPDFDAHEVLHFVDDPDCGLRAIIAIHSTKLGPAAGGA
                     RFWHYEDSAEALTDALRLSRGMSYKNAMAGLPLGGGKSVILAPRDKHKSPELLAAFGK
                     AVDRLSGRYITAEDVGMSVKDMVEVSRQTKFVAGLPSEGSDVGGDPGPHTALGVFLGL
                     KAAVRRALGKDSVSGLHIAIQGAGSVATGVAMHAANEGARLSIADIDAARAKKLADAT
                     DGEVVSPDEILFLEADVVSPCALGAILTEESIARLRVPIVAGAANNQLATAADGARLN
                     DRNILYAPDYVINAGGIINVCTEYLGDGDASLVRERINAIPARLEQIWSESAATGSDP
                     AAVADAMAQRLIGRG"
     gene            complement(3536..3612)
                     /locus_tag="VHN55_10280"
     tRNA            complement(3536..3612)
                     /locus_tag="VHN55_10280"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3576..3578),aa:His,seq:gtg)
     gene            4045..4728
                     /locus_tag="VHN55_10285"
     CDS             4045..4728
                     /locus_tag="VHN55_10285"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX2804348.1"
                     /translation="MPHMVVQASPRRPFREVGAERNEVMFVRSGILAKYKSDESGRRQ
                     IVALRFPGDGILPAEGRANYGIQAIVRSEVLIGKAEDFNAIVDKHPQLQRFFRGLVQR
                     NEAIGYEWLVNCGRRDSIARVAHLLCETAARTGIDCEHEKMVNPFTQQQIADMTGQTS
                     VNVNRVFADLERQGLIERVGREIAFKRWSELRRLACFQPAYLERHAAISAASAVSTAR
                     STSKRRLHH"
     gene            complement(4750..4824)
                     /locus_tag="VHN55_10290"
     tRNA            complement(4750..4824)
                     /locus_tag="VHN55_10290"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4790..4792),aa:Val,seq:cac)
     gene            complement(4866..5141)
                     /locus_tag="VHN55_10295"
     CDS             complement(4866..5141)
                     /locus_tag="VHN55_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013846598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX2804349.1"
                     /translation="MNKQELIGHVADRAGFSRSEAGRAVETMLEVITSALKRGDEVRL
                     VGFGNFTVTRRKASTGRNPRTGEPMQIKATSQPKFRPGKVLKDAVQS"
     gene            complement(5250..7649)
                     /gene="lon"
                     /locus_tag="VHN55_10300"
     CDS             complement(5250..7649)
                     /gene="lon"
                     /locus_tag="VHN55_10300"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEX2804350.1"
                     /translation="MTRFLPLLPLRDIVVFPQRIVPLFVGREKSVAALEAAMAADKEL
                     FLVAQLDPAEDDPGRDDLYDLGVVASAMQLLKLPDGTVRVLVEGAKRAKLVGLVERDG
                     YVAAEIEEIEEQKADGPEVQALMRSVVEQFDNYAKLNKRLPPETGIQLAELDDPSVLS
                     DAVASNLSIKVADKQAILGELNPARRLEMVFAFMEGELGVLQVEKKIRSRVKRQMEKT
                     QREYYLNEQLKAIQRELGNEGEEGGDELQELAAKIRKTKLSKEAAARANAELKKLKAM
                     APMSAEATVARNYLDVLLGLPWGKKSRVKKDLVEAERILDEDHYGLEKVKERIVEYLA
                     VQARTNKLKGPILCLVGPPGVGKTSLGRSIARATGREFVRQSLGGVRDEAEIRGHRRT
                     YIGSLPGKIISNIRKAGTSNPLFLLDEIDKLGQDFRGDPSSALLEVLDPEQNSKFQDH
                     YLELDYDLSDVMFVTTANSLDMPQPLMDRMEIIRLEGYTEDEKVQISKRHLIPKQMEA
                     HGLKPEELVFTDGGLKAMIQHYTREAGVRTLERELAKVARKSLRQILEGKVECVELTA
                     DNVSEFLGVRKYRYGLGEEEDQIGAVTGLAWTEVGGELLTIEAVTVPGKGEIKTTGKL
                     GDVMKESVQAAMSFVKARSPSFGVKPSLFARKNIHVHLPEGAVPKDGPSAGVGMVTAM
                     ISTLTGIPVRRDVAMTGEVTLRGRVLPIGGLKEKLLAALRGGIKTVLIPAENEKDLAE
                     IPKSVTENLEIISVSHVDEVLAHAMTEPMRPIEWTDADEHAAEATIPPAEPGGEAAVR
                     H"
     gene            7736..7948
                     /locus_tag="VHN55_10305"
     CDS             7736..7948
                     /locus_tag="VHN55_10305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804351.1"
                     /translation="MTEREKISTGPNAEPLDENIAGTAPGIPDDSLAPGEKDLPEPPT
                     DEQVEKAEEALGAPQGERDTLPLDGE"
     gene            complement(7949..8440)
                     /locus_tag="VHN55_10310"
     CDS             complement(7949..8440)
                     /locus_tag="VHN55_10310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804352.1"
                     /translation="MGATGPLRFLPRAIRTPQRPLRAIAIGWLTAFPPTILFAILGSI
                     LLPQAEPPQFAMSGAAAIFALVIFSPVIETLIMGAVLLVLLRLVPTVAAIAISTIGWG
                     IAHSLATPIWGLVIWWPFLVFSTLFVAWRSRSLVLAFTIPMVVHALQNLIPALLVAYA
                     APA"
     gene            complement(8467..9732)
                     /gene="clpX"
                     /locus_tag="VHN55_10315"
     CDS             complement(8467..9732)
                     /gene="clpX"
                     /locus_tag="VHN55_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011951440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEX2804353.1"
                     /translation="MTKLSGSDGKSTLYCSFCGKSQHEVRKLIAGPTVFICDECVELC
                     NDIIREETKSALVKTRDGVPTPAEICKVLDDYVIGQDRAKRVLSVAVHNHYKRLNHSG
                     KSGAEVELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVEN
                     IILKLLQASDYNVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGT
                     TASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISDRMEGKSMGFGAHVAAP
                     DERKTGEILQHCEPEDLLKFGLIPEFIGRLPVIATLLDLDEEALIKILVEPKNALVKQ
                     YHKLFDMEDVDLAFSDDALGAVARKAIDRKTGARGLRSILEGILLDTMFDLPSMDGVD
                     EVHIDKDVVEGRKDPVRVYAKKGKTGDAA"
     gene            complement(9982..10995)
                     /locus_tag="VHN55_10320"
     CDS             complement(9982..10995)
                     /locus_tag="VHN55_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003047399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEX2804354.1"
                     /translation="MHELALPLLIGLIAVALAFDFLNGLHDAANSIATVVATRLLSPL
                     AAVGFAAFFNFAAYFLALAVPQLHKVAETVGAGLIDKNLVTPAVVFGALGGAMFWNIV
                     TWLKGIPSSSSHALVGGIVGAGVAHASVSAIEWPGLSKTLIAIVLSPTLGMMLAMLIM
                     LLTSWLGVRATARGAERSFRALHLISSATYSLGHGLNDAQKTMGIITVLLYSTGYLSG
                     EFHVPHWVALSCYVAIALGTLSGGWRIIETMGTRITKLSQHQGFSASAGGSVMLLSAS
                     WLGIPVSTTHTITGCVIGAGAARRASSVRWGVARSVAIAWIITIPASAIVGALFYLLT
                     RLF"
     gene            complement(11008..11652)
                     /locus_tag="VHN55_10325"
     CDS             complement(11008..11652)
                     /locus_tag="VHN55_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HEX2804355.1"
                     /translation="MFGWFQRLLPKKGDFFGLFEAHSAAVVAAAAALRDLAADGGTTE
                     ELLERIQKHEHEADDVIREVLKAVRLTFLTPFDRSAITHLIGAMDDAVDEMLAAARAI
                     DLYELREMRPEMKRIVELIVEAAAVTSQAIPLLRNVGRNGAELHRLTERLVSLEGEAD
                     DVHAAGLKLAFQEYSKSSPIQFAVTREVFKHLERVTDAFEDVANEIDGIVIDHS"
     gene            complement(11730..>12372)
                     /gene="clpP"
                     /locus_tag="VHN55_10330"
     CDS             complement(11730..>12372)
                     /gene="clpP"
                     /locus_tag="VHN55_10330"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEX2804356.1"
                     /translation="DIISQLVPIVIEQSNRGERSFDIYSRLLRERIVFITGAVEDHMA
                     SLVTAQLLFLESENPKKDIFMYINSPGGVVTAGMAIHDTMQYIRPKIGTVCIGQAASM
                     GSFLLAAGEPGMRVALSNSRIMIHQPSGGAQGMAADIEIQAREILRIRARLNSLYAKY
                     TGQPIEEIEKSMDRDKFMEADEAKQFGIIDEVFEKRPDTGDDSGTGAGEVTPS"
BASE COUNT         2298 a         4013 c         3828 g         2233 t
ORIGIN      
        1 gaatcgaaat agggcggtcc caccgacagc ttcgaacccg tcacagcctc aacgaacagc
       61 ggatagaggg ttccgacgaa cacgattccc aggattaccg tcagcaacaa attgttgccg
      121 accagcgccg cttcgcgact gaccagctcg aatggtggcc cctcggcgag cttccccgac
      181 cgcaacgcga acagcaggaa cgccgctccg acgtagatcg ccagcaggac cagcaggaac
      241 gtgccgcggc cagggtcgac cgcgaaggag tggacggagg tcaatatgcc cgaccggacc
      301 aggaaggtgc cgaccattga catggaaaag gcgatcatcg ccagcatcac cgtccacgcg
      361 cgaagcgaat cccgggctgc gagcacgttg acagagtgaa gcaaggcagt cgccgccagc
      421 cacggcatca gcgacgcatt ctcgaccggg tcccagaacc accagccgcc ccagccgagc
      481 tcgtaataag cccaatagct tcccgcggtg atccccaggg tcagaaggat ccacgcagcc
      541 agcacccacg gccgcattgc cttggcaagc gccgaatcca cgcgaccggt cagaagagcg
      601 ccgacggcga ggctgaaggc cacggacagg ccgacatagc caagatagag cgtcggcgga
      661 tggaagacga ggcctgggtc ttgaagcagc gggttgagac ccctcccctc gaacgccggc
      721 ggctcgagcc gcgcaaacgg gttcgacgag aacagcagga aggcgaagaa gccgagggca
      781 agcgcgccct gcgctccaag cgctgcgctc aaggtccgct cctccattcg ccgcgagaag
      841 accgcgagca cggcaccggc catcccgagc accgtcaccc acagcagcat cgacccctcg
      901 tggttccccc atgcgcccgc cagcttgtag acccagggct tggcgctgtg gctgttctcg
      961 gcgaccagta gaaccgacag atcggtgcgc gcgaacagga tcatcagcat cgtcatcgcg
     1021 aacagggtca gcccgccctc gacgatcgcg acggaccgca ctgcggttcc ggaccgcacc
     1081 ggcccgaaag cgagcaccat ctgcagaagc gccagagccg ccgccagcca cagcgcggcg
     1141 agtccggctt cggcgatcac ttctccaccg tcttcgccgc cttatgctcc gcggccgggt
     1201 tgccgagctc cggcggcatg tagcgctcgt cgtgcttggc gaggatgttg tgagcgacga
     1261 atgtcccgtc cgcggcgagc ctgccttcgg caacagcgcc gctaccttcg cggaacaggt
     1321 ccgggacgat gccgcgatag acgacgggga ccgcagcctc tccgtcggcg atacgaaacc
     1381 ggatggtcac tccgtcggcg agccgctcgg tcgagccttc cgcgaccatt ccgccgagcc
     1441 ggatgggctt tccgactacc gcttctccgg cggctatttc cgccggagtg tagaagtaag
     1501 cggctcggtc tctcagcccc cacatcgcca gcagtacagc ggccagaatc gccgcgacgg
     1561 cgaccgctat caataccagc cgctggtgct tgggcttaac catcgtcacg ctgcagcttg
     1621 tccgtttctg cttcggcccg ccgcatcgac gcgaacgaca ggaccaacag cacggccgtc
     1681 gccaaaagcg agaccgcata ggcggcgatg acgaacggcc acgggttcat tccgaagagg
     1741 ccctccgaag ccgcgcttcg acacgggccc gagcgagctc ggcccgcatg cgcatcagca
     1801 cggcggcagc aaacaggaac gtgaacccga agaaggtcag cggaagcggc cacaggatcg
     1861 accagtcgat cgtcgatccc gaaaggccga tgctctgtcc ctggtggaga gtgcgccacc
     1921 acagcaccga atagtggatg accggcaggt tcactgctcc aacgatgcca aagatggcgg
     1981 tgacccgccc ttccccgctg cgctccctct cggcggcagc cagggcgatg tatcccaggt
     2041 acaggaagaa caggatcagc atcgacgtca gccgcccgtc ccattcccac caggtgcccc
     2101 aggtcggtcg tccccagatg gagccggaga gaaggcaaat cgctgcgaat gtcgctccgg
     2161 ctggagcgat cgcgcgcccg gctaccgctg ccagcggatg cctccagacc aattgggtaa
     2221 cggctgctgc ggcgatgccc gcccatccgg ccattgcgag ccaggccgcg ggcacgtgga
     2281 catacatgat ccgcacggtc tcgccctgca ggtaatcggg cggagtgagt gtcagcccgg
     2341 ccgctactcc gacgatcgca aggaccaggc cgaccgcgag caaccacgag gtcgcgggcc
     2401 gggcgatgcg caggaaacgc gccggatttg cgagcgcgtg catggtgacc gcgttcagcc
     2461 ccttccgatc agccgctgcg ccatcgcatc ggcgactgcc gccgggtcgc tgccggtcgc
     2521 ggcgctctcg ctccagatct gctcgagccg cgcagggatc gcattgattc gctcgcgcac
     2581 caggcttgca tcgccgtcgc cgaggtattc tgtgcaaacg ttgatgattc ccccggcgtt
     2641 gatcacatag tcgggcgcat agaggatatt gcggtcgttc aggcgagcgc cgtcggcggc
     2701 ggtcgctagc tggttgttcg ctgcgcctgc gacaatcggc acgcgcagcc tcgcaatgga
     2761 ttcctcggtg aggatcgctc caagcgcgca tgggctgacc acgtccgctt ccaggaaaag
     2821 gatttcatcc ggagagacga cctcgccgtc ggtggcatcg gcgagctttt tcgcccttgc
     2881 cgcgtcgata tcggcaatcg acagcctggc gccttcgttg gccgcatgca tcgccacacc
     2941 cgtcgcgacg ctgccggcgc cctgtatcgc aatgtgaagt ccgctgacgc tgtccttgcc
     3001 caaggcacgg cgaacggccg ccttgaggcc caggaatacg ccgagcgccg tatgcggccc
     3061 gggatcgccg ccgacatccg agccttcgct tggaagccca gcgacgaact tcgtctggcg
     3121 gctgacctcg accatgtcct tgacgctcat cccgacatct tcggcggtga tgtagcgacc
     3181 gctcaatcgg tccacagcct tgccgaacgc ggccagcagc tcgggcgact tgtgcttgtc
     3241 ccgcggtgcc aggatgacgg attttccgcc gcccaatgga aggcccgcca tcgcattctt
     3301 gtagctcatc ccgcgcgaga gccgcagtgc gtcggtcagt gcttcggcgg aatcttcata
     3361 gtgccagaac ctcgctccgc ccgctgccgg accgagtttg gtcgaatgaa tcgcgataat
     3421 ggctcgaagg ccacaatcgg ggtcgtcgac gaagtgaaga acttcatgcg cgtcgaaatc
     3481 ggggaaaccc cagggcgttt tcatcggtcg ggatcagtcc gcttgcaaga atagttgggg
     3541 cgaccgaggg gacttgaacc cccgacccct ggtaccacaa accagtgctc taaccagctg
     3601 agctacgatc gccacggcac gcccgggagc tccttgttga aggttcccaa agcgcgcgcg
     3661 ctccttaggg ttgggaaccc ctgaacgcaa cccgaaccgg gtgcggaagc tcccaaccgg
     3721 cgccctgcgc taacttccga cccggattgg cacgaacgga ctgaaatcga gcgccgtcac
     3781 caactaaaga tagtagttcg taatgccttt ggtagatgaa attactgccc gcgcaatcga
     3841 acacgcaatt ttagcaccta ttgctgaccg ccgacaattg tttctccttg cgcccgactg
     3901 ggagcggcct catgctgcac gcggggagaa ctgccaatgc tgtcgagtcg cgggccaagc
     3961 ctagccaccg ctccaccgat atcgccaaag gaaagtctcg aggttgcggg actcgacccg
     4021 gtggttgcgg ccgcgctcga gcaaatgcct cacatggtcg tgcaggcgag cccgaggcgt
     4081 ccgttccgcg aagttggcgc ggagcggaac gaggtgatgt tcgtccgctc cggaatcctc
     4141 gcaaagtaca aaagcgacga atccggccgg cgccagatcg ttgcactccg tttcccgggc
     4201 gacggcatct tgcccgccga aggacgggcc aattacggga tccaggcgat cgttcgaagc
     4261 gaagtgctca tcggcaaggc cgaagacttc aatgccatcg tcgacaagca tccgcagctg
     4321 caacgattct tccgcggcct ggtccagcgc aacgaggcaa tcggttacga atggctggtc
     4381 aattgcggcc gaagggattc gatcgcccgg gtcgctcacc tgctttgcga gactgctgcc
     4441 cgaaccggga tcgattgcga gcatgaaaag atggtcaatc cgttcaccca gcagcagatt
     4501 gccgacatga cgggccagac atcggtcaac gtcaacaggg tctttgccga tctcgaacgc
     4561 cagggcctga tcgagcgcgt gggccgcgaa attgcgttca agcgatggtc ggagctacgg
     4621 cgtctcgcct gtttccagcc agcctatctc gaacgccatg ctgcgatttc ggctgcttcg
     4681 gccgtttcga cagcgcgctc gacttccaag cggcgtctcc accattagtt ttccgctgcc
     4741 tgccggggat ggtgggcgcg acagggattg aacctgtgac cccacccgtg tgaagggtgt
     4801 gctctaccgc tgagctacgc gcccatcccg agttggccgc gcataaaagc gcccggcctc
     4861 ttcgtctagc tttgaacggc gtccttgagc accttgccgg ggcggaactt cggctgcgac
     4921 gtcgccttga tctgcatcgg ctcgccggtg cgcgggttgc ggccggtgga cgcctttcgg
     4981 cgagtgaccg tgaaattgcc gaaaccgacc agccggactt cgtcgccgcg cttcagcgcc
     5041 gacgtgatca cctcgagcat cgtttcgacc gcccgacccg cctcgctgcg gctgaatccg
     5101 gcgcggtcgg cgacgtggcc gatcagttcc tgcttgttca ttcgctccct gctccccggt
     5161 cactcgcgcg agactcgcgc agtttcttgt cgcgacttaa cgccagagtc gcaacctgag
     5221 tcaaagccct tcgacctcaa acgacaggcc tagtggcgga ctgcggcctc gccgccgggc
     5281 tcggccggag ggatcgtcgc ttcggccgca tgctcgtcgg cgtcggtcca ctcgatcggc
     5341 cgcatcggct cagtcatcgc gtgggcgaga acctcgtcga cgtggctgac gctgatgatc
     5401 tcgaggttct ccgtcaccga tttcggtatt tcggccaggt ctttctcgtt ctcggccggg
     5461 attagaaccg tcttgatacc gccgcgaagc gccgccagca gcttttcctt caatccgccg
     5521 atgggaagga cgcgcccgcg aagcgtcact tcgccagtca ttgcgacgtc gcgccttacc
     5581 gggattcccg taagcgtcga aatcattgcc gtgaccattc caacgccggc ggacgggccg
     5641 tccttcggaa ccgcgccctc gggcaagtga acatggatat tcttccgggc gaacaggctg
     5701 ggctttactc cgaatgacgg cgagcgcgcc tttacgaagc tcatcgccgc ctggaccgac
     5761 tccttcatca cgtcgccaag cttgccagtc gtcttgatct cacccttgcc gggtaccgtt
     5821 accgcctcga tcgtcagaag ctcgccgccg acttcggtcc aggccagccc ggtgaccgcg
     5881 ccgatctggt cctcctcctc gccaagtccg taacgatatt tgcgcacccc gaggaattcg
     5941 gagacgttgt cggcggttag ctcgacgcac tccactttgc cttccaggat ctggcgcaac
     6001 gacttgcgag cgaccttcgc cagctcgcgc tcgagagtcc ggacgccggc ctcgcgagta
     6061 taatgctgga tcatggcctt caggccgccg tcggtaaata ccaattcttc cggcttcagc
     6121 ccgtgggctt ccatctgctt cgggatcagg tggcgcttgg aaatctggac tttttcgtcc
     6181 tctgtgtacc cttcgagccg tatgatctcc atgcggtcca tcagtggttg gggcatgtcg
     6241 agcgagttgg cggtggtgac aaacatcacg tccgacaggt cgtaatcgag ctcgagataa
     6301 tggtcctgga acttcgaatt ctgttcggga tcgagaactt cgagcagtgc agacgacggg
     6361 tcgccgcgga agtcctggcc gagcttgtcg atctcgtcga ggaggaacag cgggttactc
     6421 gttcccgcct tgcggatatt cgaaatgatc ttgcccggaa gcgagccgat gtaggtgcgc
     6481 cggtggccgc gaatttccgc ttcgtcgcgg actccgccca gcgactggcg aacgaactcg
     6541 cggccggtcg cacgggcgat cgagcggccg agtgaggtct tgccgacacc cggcgggccg
     6601 acgaggcaca ggatcggccc cttcagcttg ttggtacgcg cctgcacggc gagatactcg
     6661 acgatccgtt ccttcacctt ctcgagcccg tagtggtcct cgtcgagaat acgctcggct
     6721 tcgacgaggt ccttcttgac cctcgacttc ttgccccacg gcagcccgag caggacgtcg
     6781 agataattgc gggcgacggt cgcctcggcg gacatcggcg ccatcgcctt cagcttcttc
     6841 agctcggcat tggcgcgggc tgccgcctct ttcgacagct tggtcttgcg aatcttggcg
     6901 gccagctcct ggagctcatc gccgccttct tcgccttcgt tgcccagctc gcgctggatc
     6961 gccttcagct gctcgttgag gtaatattcc cgctgggtct tctccatctg gcgcttgacc
     7021 cggcttcgga ttttcttctc gacctggagc acaccgagct cgccctccat gaaggcgaac
     7081 accatttcaa gccggcgcgc cgggttgagc tcgccgagga ttgcctgctt gtcggcgacc
     7141 ttgatcgaaa ggttggaggc tacggcatcg gacaggactg acgggtcgtc gagctcggcg
     7201 agctggatcc ccgtttccgg gggaagccgc ttgttgagct tcgcataatt gtcgaactgt
     7261 tcgacgaccg agcgcatcag cgcctggact tccggtccgt ccgctttctg ctcttcgatt
     7321 tcctcgattt cggcggcgac ataaccgtcg cgctcgacaa ggccgacgag ctttgcgcgt
     7381 ttggcacctt ccacgagtac gcggaccgtt ccgtcgggca gcttcagaag ctgcatcgcg
     7441 ctcgccacga ctcccaggtc gtagagatcg tcgcggccgg gatcgtcctc ggccgggtca
     7501 agctgcgcga ccaggaacag ctccttgtcg gctgccattg cggcttcgag cgccgcgacg
     7561 gacttttcac ggccgacgaa aaggggaacg atccgctgcg ggaaaacgac gatgtcgcga
     7621 agcgggagaa gcgggagaaa gcgagtcatg gagcctatat gggcagcgcg cgcgccttgc
     7681 gcaacgcggg aacaagtcca ttatcggcgc gctgaatccg ccaggaggcg gtgacatgac
     7741 ggaacgcgag aagatcagca ctggcccgaa cgccgagccg ctcgacgaga acattgccgg
     7801 gacggcgccc ggaatccccg acgacagcct agctcccggc gagaaggatc tccccgaacc
     7861 gcccacagat gaacaggtcg agaaggccga ggaggcgctc ggagctccgc agggcgaacg
     7921 cgatacgcta ccgctcgatg gcgaatgatt aggccggcgc tgcgtaggcg acgagcagcg
     7981 ccgggatcag gttctggagg gcatgcacga ccatcgggat cgtgaacgcg aggaccagcg
     8041 agcggcttcg ccacgccacg aacagtgtcg agaagaccag gaacggccac cagatcacca
     8101 ggccccagat gggggtcgca agcgaatgcg ctattcccca cccgattgtg ctgatcgcaa
     8161 tggcggccac cgttggaact agccgaagca gcaccagcag aacagcaccc atgatcagag
     8221 tctcgattac aggcgagaag atcaccagcg caaaaatcgc cgcagctccg ctcatcgcaa
     8281 attggggcgg ctccgcctgc ggcaggagaa tggacccgag gatcgcgaaa aggatcgtcg
     8341 gcgggaaagc ggttagccat ccgatggcga tcgcgcgaag cggacgctgg ggcgtccgga
     8401 tcgctcttgg aagaaatcga agcgggcccg tggcgcccac cgccacagcg cccccgggac
     8461 taggactcac gcggcgtcgc cggtcttacc cttcttcgca tagacccgga ccgggtcctt
     8521 gcgcccttcg acgacgtcct tgtcgatatg gacctcgtcg accccgtcca tcgacggcag
     8581 gtcgaacatc gtgtcgagca ggattccctc gaggatcgag cggaggccgc gggcgccggt
     8641 cttgcggtcg atcgccttgc gggcaaccgc ccccagggcg tcgtcgctaa acgcgaggtc
     8701 gacgtcctcc atgtcgaaca gcttgtgata ttgcttcacg agcgcgttct tgggctcgac
     8761 caggatcttg atcagcgcct cttcgtcgag gtccagcagg gtcgctataa ccggcagtcg
     8821 gccgatgaac tcggggatca ggccgaattt cagcaggtcc tcgggctcgc aatgctgcag
     8881 gatctcgccg gtcttgcgct cgtcgggggc cgcgacatgg gcgccgaagc ccatcgactt
     8941 gccttccatt cggtcggaga tgatcttctc cagccccgcg aaggcgccgc cgcagatgaa
     9001 caggatgttg gtggtgtcga cctgcaggaa ttcctgctgc gggtgcttgc ggccgccctg
     9061 cggcgggacc gaagcggtcg tgccctccat cagcttcagg agcgcctgct gcactccctc
     9121 gcccgagaca tcgcgcgtaa tcgacggatt gtccgacttg cggctgatct tgtcgatctc
     9181 gtcgatatag acgatcccgc gctgcgcctt gtcgacattg tagtcggagg cctggagcag
     9241 cttgaggatg atgttctcga catcctcgcc gacataaccg gcctcggtca gcgtggtcgc
     9301 atctgccatt gtgaacggaa catcaagaat gcgtgcaagc gtctgcgcaa gcagcgtttt
     9361 cccgcaaccc gtggggccga tgaggagaat attcgacttc gcgagctcga cctccgcgcc
     9421 ggacttgccg ctgtggttca accgcttgta gtggttgtgg accgcgaccg agaggacgcg
     9481 cttggcgcgg tcctggccga ttacgtaatc gtcgagcacc ttgcagatct cggccggggt
     9541 cggaaccccg tccctggtct ttaccagggc agacttggtc tcttcgcgga tgatatcgtt
     9601 gcacagctcg acgcattcgt cgcagatgaa caccgttggc ccggcaatga gcttgcggac
     9661 ctcgtgctgc gacttgccgc agaacgagca gtaaagggtg ctcttgccgt cgctgcccga
     9721 tagtttcgtc attgagttcc ttgcgtccta cgcttgacgg agccgacagc tccgcaccgg
     9781 ccacgctaac cggatttcta gcacacgcaa gcttggggtt cggttaacgc cctgtgccga
     9841 tgtgccattt cggtcactga tatggatgcg cccgacaaag cggacaagag cgggccgggc
     9901 gatactctgt taatagtcga tggcgaacgc cagctcgtcc gagcggcccc tcccccttag
     9961 cggcgtcgcc tttgcgagcc ctcagaacag ccgcgtcagt aggtagaaga gcgcaccgac
    10021 gatagccgac gcggggatgg tgatgatcca ggcgatggcg acgctgcggg ctacacccca
    10081 gcggaccgac gaggcgcggc gggcggcacc ggctccgatc acacagccag taatcgtatg
    10141 tgtggtcgaa accgggattc cgagccaaga tgcggacagc agcattaccg agccgccggc
    10201 ggacgcgcta aatccctggt gctgcgagag cttggtgatg cgggtgccca tcgtctcgat
    10261 gatccgccaa ccgcccgaca gcgtccccag agcgatcgcc acgtagcagc tcagggctac
    10321 ccagtgcggg acatggaatt cgcccgacaa atagccggtc gagtaaagca gcacggtgat
    10381 gatccccatc gtcttctggg catcgttgag cccgtgccca agcgagtagg tcgcggagga
    10441 gatgagatgg agggcgcgga agctgcgctc ggccccgcgg gcggtcgctc gtactccaag
    10501 ccagcttgtc agcagcatga tcagcatcgc gagcatcatg ccgagcgtcg gcgacagcac
    10561 gatcgcgatc agagtcttgc tgaggcccgg ccattcgatc gccgacaccg aagcgtgagc
    10621 caccccggcc ccgacgattc cgcccacaag cgcatggctc gatgaggacg ggataccctt
    10681 gagccaggtc acgatgttcc agaacatcgc cccgcccagt gcgccgaaca cgaccgcggg
    10741 cgtcaccagg ttcttgtcga tgaggccggc gccgaccgtt tccgcgacct tgtgaagctg
    10801 gggaaccgcc aaggcgagga aataggcggc gaagttgaag aaagcggcga aaccgactgc
    10861 cgcgagcggg ctaagaagcc gcgtggcgac gaccgtcgcg atggagttgg cggcgtcgtg
    10921 gagtccgttg aggaaatcga acgccagggc gacggcaata aggccgatca gcagcggtag
    10981 ggcgagctcg tgcatgctgc cctgtgccta cgaatggtcg atcacgatgc cgtcgatttc
    11041 attcgcgacg tcctcgaagg cgtccgtgac cctttcgagg tgtttgaaga cctcgcgggt
    11101 gaccgcgaac tggatcggac tgcttttcga atattcctgg aaggcgagct tgagacccgc
    11161 ggcatgaaca tcgtcggcct cgccttcgag acttacgagc cgctcagtca gcctgtggag
    11221 ctcggcaccg ttgcggccga cgttgcggag cagcggaatc gcctgcgacg tcacagccgc
    11281 agcctcgacg ataagctcga cgatccgctt catttccggc ctcatctcgc gaagctcgta
    11341 caggtcgatg gctctcgcgg cagccagcat ttcgtcgacg gcatcatcca ttgcgccgat
    11401 caggtgcgtg atcgcgctcc ggtcgaacgg ggtcaggaac gtcagccgga cggccttgag
    11461 cacttcgcgg atgacgtcgt cagcctcatg ctcgtgtttc tggattcgct cgagaagctc
    11521 ttcggttgtg ccgccgtccg cggccaggtc gcgaagcgcc gcggccgccg caaccactgc
    11581 agccgaatgc gcctcgaaca atccgaagaa atcacccttc ttcggcaaaa ggcgctggaa
    11641 ccatccgaac atgtaagcga ccccctgttg tcgcagacct taccgtccca atggcagggt
    11701 tttaccgcag cgcaaccccg aagcgccgct cagctcggcg tcacttcgcc cgcgccggtt
    11761 cccgaatcat cgcccgtatc gggtcgcttt tcgaagactt cgtcgatgat cccgaactgc
    11821 ttggcctcgt cggcttccat gaacttgtcg cggtccatcg acttctcgat ctcctcgatc
    11881 ggttgaccgg tatatttcgc atagagcgaa ttgagccgag cgcggattcg caggatttcg
    11941 cgtgcctgga tctcaatgtc cgcggccatt ccctgggctc cgccggacgg ctggtggatc
    12001 atgatccggc tgttggataa cgctactcgc atccccggct cgcctgccgc gaggaggaag
    12061 cttcccatcg atgcggcctg gccgatgcat acggtcccga tcttgggccg gatatattgc
    12121 atcgtgtcgt ggatcgccat tccggcggtc acgaccccac ccggcgagtt gatgtacatg
    12181 aatatgtcct tcttcgggtt ctcggactcg aggaagagca gctgcgcggt gacgaggctg
    12241 gccatatggt cctcgacggc gccggtgatg aagacgatcc tctcgcgaag cagccgcgaa
    12301 tagatgtcga agctgcgctc gccgcggttc gattgttcga tgacgatcgg aacgagctgc
    12361 gagatgatgt cc
//
LOCUS       DATAKH010000241        10644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_30983,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000241 DATAKH010000000
VERSION     DATAKH010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 10644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10644
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30983"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1113)
                     /locus_tag="VHN55_10335"
     CDS             complement(<1..1113)
                     /locus_tag="VHN55_10335"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2804357.1"
                     /translation="MRFLLLPMRFPIEPGNSYLTTELADALLDAAHQVRVLQLDWESE
                     PGRSTQSLVSERGIAVDRVFPRAIGKPGSFLYRASKFVLSARHVGREARHRLTMNQFD
                     CVIAWMPAIAFAPVVRQAARAGVPSRQLIIWDFFPDHHAEIGRVPGGLVRWLARRWEQ
                     SLVRTFTTIFCTLPANCDYLRRRFRLAERQQVRIAPVWTTLEMPAPVDRAEVRSRYSL
                     PAEAPIAVFGGQIAAGRGFEQMLAAAEGSPLAFLFVGDGPMADDVSARAKTAPNVFYL
                     PAMPSADFQELLSACDVGLVATVPGVTSQTMPSKTFAYLKAGLPVVAAVEPGNEFAAL
                     LEQRALGRAVPFGDPDAFQREAAALATDDLFREGLAE"
     gene            complement(1118..2245)
                     /gene="wecB"
                     /locus_tag="VHN55_10340"
     CDS             complement(1118..2245)
                     /gene="wecB"
                     /locus_tag="VHN55_10340"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010232975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEX2804358.1"
                     /translation="MTAPRLKVMTVVGTRPEIIRLCRVIPALDKATHHVLVHTGQNYD
                     PELSDVFFDELGLRQPDHRLDAAGASPAETIGKTIIAVDKVLEGERPDALLVLGDTNS
                     CLAVIAAKRRRIPVFHMEAGNRCFDERVPEEINRRIVDHTSDINLTYSAIAREYLLAE
                     GFPADRVIRTGSPLFEVLAHHRAAIDSSDAVARLGLDSGGYFLVSCHREENVDDPERL
                     RSFAAILDTVAKSHGLPILLSTHPRTRARIEALGLQFDPLVRLCSPFGYLDYVALQLN
                     ARAVLSDSGTISEESAILGFPALNIRDAHERPEAMENAVVMMTGLDPAAALRALDVLF
                     ARQGAPALPADYSVPDVSEKIVRIILSYTGYVRRTVWREAT"
     gene            complement(2242..3351)
                     /locus_tag="VHN55_10345"
     CDS             complement(2242..3351)
                     /locus_tag="VHN55_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010232977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX2804359.1"
                     /translation="MNSKVRAVTVTGAHGFVGRNLCLRLAERGIEAVPVTRETTPAEL
                     RAALARSDVVVHLAAENRPAEPADFMRVNRDYTAMVADEIAESGKRPLVLVASSVRAA
                     GDDEYGRSKRAGELAMEAIGNSATVSIWRLPNLFGKWARPNYNSVVATFCHNLAHGLP
                     LAIDDPAAPLSLLYIDDLIDEWLAAIDGDAKPGLVEPDGVHRTSVGELADLLQSMAEG
                     RRAGQVMHVGSGFERALSATYLSYLEPEQFRCPLVTRDDSRGSFSEVLRTPDSGQVSV
                     LTVHPGQTRGGHYHHTKAEKFVVVHGRARFRFRHVLSGESVEFVVGDDSLEAVETIPG
                     WIHDITSVGDGDVVALLWASEQFDPARPDTVSSPL"
     gene            complement(3341..4405)
                     /locus_tag="VHN55_10350"
     CDS             complement(3341..4405)
                     /locus_tag="VHN55_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010232979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEX2804360.1"
                     /translation="MAGGSTMLSNATFTGSTLMITGGTGSFGSTMLRHFLNLPVKEIR
                     IVSRDEKKQDDLRRRCGDERVKFHIADVRDATTMDLLCRGVDFIYHAAALKQVPSCEF
                     HPSEAVATNVLGTANVVDAAIRNNVRRVICLSTDKAVYPVNAMGMSKALMEKVVASRS
                     RMSADTGVVLACTRYGNVLASRGSVVPLFVEQVRSGKPITVTDPRMTRFVMTLDEAVE
                     LCLYAFEHARSGDMLVQKTPAVSLGNLAEAVLRVMKREDHEIRVIGARHGEKRHETLL
                     TNEEMAAAEDCGRYYRIPCDNRDLNYEAYFTEGDERLLHSSNYDSENARQLDVDEMAA
                     MLESLPDLQRCLVRDAVYEF"
     gene            complement(4448..5374)
                     /locus_tag="VHN55_10355"
     CDS             complement(4448..5374)
                     /locus_tag="VHN55_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804361.1"
                     /translation="MRTTESEARQPHSESALRFAPLGIPAAIIADDSALLDAAIANFA
                     DLRDDTDADPRIVIRLRRNELATANVGFAVSVKGSCLTIEGQGVGGHADAATGRAECR
                     FSSGYRHESRILAEIGETLLLFLLTRSGRVPVHAACIVIGETAILLAGRSGCGKSSLA
                     LAAQRQGLPVLSEDTTYVELEQRLRIRGWPGAIHLNLADAPEGEFPQRRRGGRTKAAV
                     SRIPAMPFAERAVLVAIEPGRKLELERVEADRLLAQLPAAEPGFDLLAPQVEKAMAAV
                     AEGGAWRLTLNDSPGDAVSLLREQFGRAITDM"
     gene            5414..6793
                     /locus_tag="VHN55_10360"
     CDS             5414..6793
                     /locus_tag="VHN55_10360"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX2804362.1"
                     /translation="MILFAHSNFLVQDEKQIARMRPYAPLSTLTAAALVRSAGHRVAL
                     FDATFETGIDAFERMLGKIRPAIVALMEDNFNFLTKMCTTVRRESALAMIRLARDQGC
                     LVAVNGPDASDHPEAYFDAGADVVIEGEGEATLLRVAGLWAGGERDLRQLPGLVLPGT
                     GTTGPCRPERDLDSLPLPAWDLVDVESYRRAWGGKLSWNIAASRGCPYACNWCAKPTF
                     GRRYTVRSPGNVVEEMARLKSEVAPSHLWFTDDILGLNPGWIESFASELSRRDAHIPF
                     SMQSRVNLISPRVAAGLASAGAAEVWLGVESGSQKILDAMDKGTKVGGARTATRLLRK
                     NGIRVCWFIQLGYPSEEWEDILATRDLIADEMPDDIGVSVAYPLPGTAFYDRVRAQLG
                     ARRNWHDTGDLAMLFQGTFETGFYRRIRDLLHRQAETCTIDAEAWQLLEDEAHSRRSP
                     APMLVAAGS"
     gene            6798..7595
                     /locus_tag="VHN55_10365"
     CDS             6798..7595
                     /locus_tag="VHN55_10365"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX2804363.1"
                     /translation="MASVELTRAALAFDRIADAFDDRFRPWQSVAAQRRSVRSELLDA
                     FAPGASIVEIGGGTGEDALWLADNGRRVLLTDVSPRMVQRARAKFAGRPELRAEVAAA
                     ETIDLGGERFDGAFSNFAALNCVDDLAPVARGLAKLVRPGGAVVLVVFGTFCPAEWIV
                     EAVRHRPSAMVRRFRRGAVPARLSGSNFCVRYFTARELTSAMAPWFDHAGQRGIGVFV
                     PPSAAEPWISGRPRLLSTLEALDERLSRPLAVLGDHVLHRFVRRSDA"
     gene            7600..8379
                     /locus_tag="VHN55_10370"
     CDS             7600..8379
                     /locus_tag="VHN55_10370"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX2804364.1"
                     /translation="MLDVKLASFAAAYAEHREYEGRRLAEADLLALPWLRNGPHARQW
                     AVRARTFETFLDRLLEPTAAAMARPLTVLDLGAGNGWLSHRVAALGHSAIALDIRGDD
                     VDGLGAGDWPTHFERILASFDAIPLADDSTDMTVFNASLHYALDLPAALAEAKRVTRC
                     GGTIAILDSPFYRRESDGEAMVAEKRGSAREQFGDRAEALTSLDCIEFLTPARLAAAS
                     GMEWRRRRVLYPLAYELRPLVAALSGRRPPSRFDLWTAEVR"
     gene            8376..9881
                     /locus_tag="VHN55_10375"
     CDS             8376..9881
                     /locus_tag="VHN55_10375"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX2804365.1"
                     /translation="MIVLVNPRATRPANRRFPLSLMAIGAALPPERSWEIVDGNLPDM
                     DPLEEIAGIVSRQKASGDPVEAIALTVMPGPQLVSAVPLSRALKQRFPGLPIIWGGNF
                     GSLYPAPVLNAPYVDWLVRGQGEHSFVELLDVIAGKRDPDSVAGIGFRDADGGHVLTP
                     ERPWVGPDDLADPPYHKIPVGEYLHPTFLGRRSGVYQASIGCPFGCNFCGVIAVFGRR
                     EKVQSPARMAANLAFLSREHGMDSVHFYDNNFFLNDRHAREIAAALAPLGLRWWCEAR
                     VDTLCRFSDDTWRMLRKAGLAMVFCGAESGSDEVLARMNKGTTTDQIMEVARRTREHG
                     IVPEFSFVFGDPEAPEAEIENTLRFIRRLKSANPAMELISYFYTPTPQRSGTYGGVDP
                     LSGTPDRLEEWIQPEWVDWMTHVNPQTPWLSPAAHNRVTDFETVLKSRFPSVHDKRTR
                     RWGKALGSLAARRRWALGNYDDPALLRAIRRAAQVEPDDSQAYGHLRAAAE"
     gene            complement(9883..>10644)
                     /locus_tag="VHN55_10380"
     CDS             complement(9883..>10644)
                     /locus_tag="VHN55_10380"
                     /inference="COORDINATES: protein motif:HMM:NF026257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2804366.1"
                     /translation="FLVSRADAAGAEAELEALGFRRIARTPLETTWQLADSARDPATA
                     ISVEADDPWSLDLHYSLDVVGPPGAATARLSALQESSRRESGPFPGASWLGQPALLLH
                     LAAHAGSGFHNLTLLRLVEIVLVARAGRAAGDLDWDEFLEAGRVTGSLAFAFPALALA
                     RRLSPADIPQAVVEKCAAQAPLAIRRLVAGMRPATAHGIDRPSVREHYAWTSGAGGWL
                     RRLAADIVPEPGSFRKSAGIHAVRARGLLRSAARR"
BASE COUNT         1792 a         3517 c         3545 g         1790 t
ORIGIN      
        1 ctccgcgagg ccttcccgga aaagatcgtc tgtcgccagg gctgcagctt cgcgttggaa
       61 agcgtcggga tcgccgaatg gcaccgcccg gccgagcgcg cgctgctcga gaagtgccgc
      121 gaattcattg ccgggctcaa ccgcggcgac gaccggcaat ccggccttga ggtaggcgaa
      181 ggttttcgac ggcatcgtct gcgacgtcac gcccgggacc gtcgcgacca ggccgacatc
      241 gcaggcgctt agcagctcct gaaaatctgc ggatggcatc gcgggaaggt aaaagacatt
      301 gggcgccgtt ttagcccggg ccgacacgtc gtctgccatc ggaccgtcgc cgacgaacag
      361 gaaggcgaga ggcgatccct cggcggcggc aagcatctgt tcgaagccgc gtccggccgc
      421 gatctgaccg ccgaaaactg cgattggcgc ctcggcgggg agcgaatagc gcgaccgcac
      481 ttccgcacgg tcgaccggcg cgggcatctc aagcgtcgtc cacacgggcg caatccgaac
      541 ctgctgccgc tccgcaagcc ggaaccgccg ccggaggtaa tcgcaatttg ccggaagagt
      601 gcaaaagatc gtggtgaagg tgcggaccag gctctgctcc caccgccttg ccaaccagcg
      661 aaccagaccg cccggcaccc ggccgatctc ggcgtgatga tcggggaaga agtcccagat
      721 gatcagctgg cgcgagggga cgcccgcccg cgccgcctgc cggaccaccg gcgcgaaagc
      781 gattgcaggc atccaggcga tgacgcagtc gaactggttc atcgtcagcc ggtggcgcgc
      841 ttcgcggccg acgtggcggg cgctcagcac gaacttgctg gcgcggtaga ggaagcttcc
      901 tggcttgccg attgcgcgcg ggaagacgcg atcgacggcg attcctcgct cactcaccag
      961 cgattgagtc gaccggccgg gttcggactc ccagtcgagc tgcaggacac gcacctgatg
     1021 cgctgcgtcg agcagcgcat cggccagttc cgtggtgagg tagctgttgc ccggctcgat
     1081 cgggaagcgc atcgggagca acaggaaccg cacgctacta ggtcgcctcg cgccacaccg
     1141 tccggcgcac atagcctgta tagctgagga tgatccggac gattttctcc gacacgtccg
     1201 gtaccgaata atcggcgggc agcgccggcg cgccttgccg ggcgaaaagc acatcgagcg
     1261 cccgtagcgc tgcggcggga tcgagaccgg tcatcatcac caccgcgttc tccatggctt
     1321 cgggccgctc atgcgcgtcg cggatgttga gcgcggggaa gccgaggatg gccgattcct
     1381 cgctgatcgt gccgctgtcc gacagcacgg cgcgggcgtt gagctggagc gcgacatagt
     1441 cgagatagcc gaacggactg cacaagcgga cgagcggatc gaactggagc ccaagcgcct
     1501 cgatccgggc cctggtgcgc gggtgcgtgc tgagcaggat cggcaggccg tgcgacttgg
     1561 cgacggtatc gagaatggcg gcgaacgacc gcagccgctc ggggtcgtcg acattttcct
     1621 cgcgatggca actgacgagg aaatagccgc cggaatcgag gccaagccgg gcgaccgcgt
     1681 cggatgagtc gatcgcggcg cggtgatggg cgagcacctc gaaaagcggg cttccggtcc
     1741 tgatcacccg gtccgccggg aagccttcgg cgagcagata ttcgcgggcg atcgcggaat
     1801 aggtcaggtt gatgtccgac gtatggtcga cgatccggcg gttgatctcc tcgggcacgc
     1861 gctcgtcgaa gcagcggttg cctgcctcca tgtggaacac cgggatccgg cggcgctttg
     1921 cggcgatgac tgcgaggcag gagttggtgt cgccgagaac aagcagggca tcgggccgct
     1981 cgccctcgag aaccttgtcg actgcaatga tggtcttgcc gatcgtctcg gcgggcgaag
     2041 cgccggcggc gtcgagccga tggtcgggct ggcgaaggcc cagctcgtcg aagaaaacgt
     2101 cggagagctc gggatcgtag ttctggccgg tgtggacgag gacgtgatgc gtcgccttgt
     2161 ccagcgctgg gataacccgg cacagccgaa tgatttccgg ccgagtcccg accaccgtca
     2221 tcaccttgag ccgaggcgcg gtcacagcgg gctgctgacc gtgtccgggc gggccgggtc
     2281 gaactgctcg ctcgcccaaa gcaaagcgac aacatctccg tcacccacgc tggtgatgtc
     2341 gtggatccat cccgggatcg tttcgaccgc ctcgagcgag tcgtctccga cgacgaactc
     2401 gacagactcg ccagaaagga catgccggaa gcggaaccgg gcgcggccat gaacgaccac
     2461 gaacttctcc gccttggtgt ggtgatagtg gccgccgcgg gtctgcccag gatgaacggt
     2521 cagcaccgag acctggccgc tgtcgggggt tcgaagcact tcggagaagc tgccgcggct
     2581 atcgtcccga gtgacgagcg gacagcgaaa ttgctcgggc tccagatagg acaggtaggt
     2641 ggcggagagc gcgcgctcga agccgcttcc cacgtgcatc acctgccctg cccggcggcc
     2701 ctcggccatc gactggagca ggtccgcgag ttccccgacc gaggtgcgat gaacgccgtc
     2761 gggctcgacg agcccgggtt tggcatcccc atcgatcgcg gcgagccact cgtcgatgag
     2821 atcgtcgatg tagagcagcg acaatggtgc ggcgggatcg tcgattgcca gcggcagccc
     2881 gtgcgccagg ttatggcaga aggtcgcgac gaccgaatta taattgggcc gcgcccattt
     2941 cccgaacagg ttgggcaggc gccagatcga caccgtcgcg gaattgccga tcgcctccat
     3001 cgccaattcg ccggcccgct tgctgcgccc gtattcgtcg tccccggcgg cacggaccga
     3061 agaggcgaca aggacgagcg gacgcttgcc cgattcggcg atctcatcgg caaccatggc
     3121 tgtgtagtcg cgattgacgc gcatgaagtc ggccggctcg gcgggccgat tctccgctgc
     3181 caagtgaact acgacgtcgc ttcgcgccag cgcggcgcgc aattcggctg gcgtggtttc
     3241 gcgggtgacg ggaaccgcct cgatcccgcg ctcggccagc cgcaggcaca ggttgcgccc
     3301 gacgaacccg tgtgcgcccg tcaccgtgac ggcgcggact ttagaattca tagaccgcgt
     3361 ctcgaacgag gcagcgctga aggtcgggaa gcgattcgag catggccgcc atctcgtcca
     3421 cgtcgagctg gcgagcattt tcggaatcat aattgctgct gtgaagcagc cgctcgtcgc
     3481 cctcggtaaa ataggcctcg tagttgagat cgcggttgtc gcagggaata cggtagtagc
     3541 ggccgcaatc ctcggccgcg gccatctctt cgttggtaag cagcgtctcg tgacgctttt
     3601 ccccgtgacg cgctccgatg acccgaattt cgtgatcctc ccgtttcatc acccttagca
     3661 cggcctcggc aaggttgccg agactgaccg caggcgtctt ctgcaccagc atgtcgccgc
     3721 tacgggcatg ctcgaatgcg tacaggcaca gctcgaccgc ctcgtcgagg gtcatgacaa
     3781 agcgcgtcat tcgcggatcg gtgacggtga tcggctttcc ggagcgcacc tgctccacga
     3841 acagcgggac gaccgagccg cgcgaggcga ggacgttgcc gtagcgagtg caggccagga
     3901 caacgccggt gtccgcactc atccgggatc ggctggccac caccttttcc atcagcgcct
     3961 ttgacatgcc catcgcattg accggataga ctgccttgtc agtcgacaaa cagataaccc
     4021 ttcgcacgtt attacggatc gccgcgtcga cgacgttggc ggtgccgagc acgttcgtcg
     4081 cgaccgcctc gcttgggtgg aactcgcacg acggcacctg cttcagggct gcggcgtgat
     4141 agatgaaatc gactccccgg cagagcaggt ccatggtcgt cgcgtcgcgg acatcggcga
     4201 tgtggaactt gacccgctcg tcgccgcagc gccggcgcaa atcgtcctgt ttcttttcgt
     4261 cgcggctgac gattcgaatt tccttcaccg ggaggtttag gaaatggcga agcatcgtcg
     4321 atccgaacga cccggtgccg ccggtgatca tcagcgtgct tccggtgaag gtcgcattcg
     4381 acagcattgt tgatccccca gccaaggaat gcgtcctttg gtaagttccg cgaagcgggc
     4441 ccggcgttca catgtcggtg atggctcgtc cgaactgctc ccgcaaaagc gagacggcat
     4501 cgccagggga gtcgttcagg gtcaggcgcc aggcgccgcc ctcggcaacc gccgccatcg
     4561 ctttttccac ctgcggcgca agcaggtcga agcccggttc cgccgccggc agctgggcca
     4621 acagcctgtc cgcttcgacg cgctccagct ccagcttccg gcccggctct attgcgacga
     4681 ggacagcgcg ctcggcgaac ggcatggccg ggatccggga caccgcggcc ttggtgcgcc
     4741 cgccccgccg ccgttgcgga aactcgcctt ccggcgcgtc ggcgaggttc aggtggatcg
     4801 cgccgggcca gccgcggatt cgcaacctct gctcaagctc gacgtaggtc gtgtcctccg
     4861 aaagaacggg gagaccctgc cgctgcgccg caagggcaag cgagctcttg ccgcaaccgc
     4921 tgcggccggc gagcagaatc gccgtctcgc cgatgacgat gcaagcggca tggaccggca
     4981 cccgccccga acgggtcagg aggaacagca gcagcgtctc gccgatctcg gccagaatcc
     5041 tgctttcgtg gcgataaccg ctggagaaac ggcactccgc cctgcccgtc gcggcgtctg
     5101 catggccccc gacgccttgg ccttcgatag tgaggcatga acctttgacc gaaaccgcga
     5161 aacctacatt ggcagtggcg agctcgttgc ggcgcaggcg gatgacgatt ctcggatcgg
     5221 catcggtgtc atccctgagg tctgcgaagt tcgcgatcgc cgcgtctagg agggcggaat
     5281 cgtcggcgat gatcgcggca ggtataccga ggggggcaaa gcgaagcgcc gactcgctgt
     5341 gcggctgccg ggcttcactc tccgtcgttc gcaccgtcgc gacccccgct cattgctgtc
     5401 gggcagctcg cccgtgattt tgttcgccca ctccaacttc ctggttcaag acgagaagca
     5461 aattgcccgg atgcggcctt atgctccgct gtcgacgctc acggccgccg cgctggtccg
     5521 gagtgccgga catcgggtcg cccttttcga cgcgaccttc gagacgggaa tcgacgcctt
     5581 cgagcggatg cttggcaaga tacgcccggc catcgtcgcg ctcatggagg acaatttcaa
     5641 cttcctgacc aagatgtgca cgacggtgcg ccgcgagagt gcgctggcaa tgatcaggct
     5701 tgcgcgcgat cagggatgcc tggtcgccgt caacggaccc gacgcgagcg accaccccga
     5761 ggcctatttc gacgccggcg ccgacgtcgt gatcgagggg gagggcgagg ccacgttgct
     5821 tcgggttgct ggcctttggg ccgggggcga acgcgacctt cgccagctcc ccggcctcgt
     5881 cctgcccggg accggaacga ccggaccctg ccgccccgag cgcgatctcg actcgcttcc
     5941 gctgcccgcc tgggatctcg tggacgtcga aagctatcgc cgcgcctggg gcggcaagct
     6001 gtcctggaac attgctgcct cgcgcggctg cccctatgcg tgcaactggt gcgcgaagcc
     6061 gaccttcggg cggcgctaca ccgtccgatc gccaggcaat gtcgtcgagg aaatggcgcg
     6121 gctcaagagc gaggtcgcgc catcgcacct gtggttcacc gacgatatcc tcggcctcaa
     6181 ccccggctgg atcgagtcct tcgcttccga actttcgcgg cgcgatgccc acattccctt
     6241 ttcgatgcag tcgcgcgtca acctcatcag cccgagggtg gccgccgggc tggcgagcgc
     6301 cggcgcagcg gaggtctggc tcggtgtcga gtccggctcg cagaagatcc tcgacgcgat
     6361 ggacaaaggg acgaaagtcg gtggcgcccg caccgcgaca cgactcctgc ggaagaacgg
     6421 aatccgggtc tgctggttca tccagctcgg ctatccctcc gaggaatggg aagacatcct
     6481 cgcgacgcgc gacctgatcg ccgacgagat gcctgacgac atcggcgtgt ccgttgccta
     6541 cccactcccc gggaccgctt tctacgaccg ggtccgggcg cagctcggag cgcgccgcaa
     6601 ctggcacgac accggggacc tggcgatgct gttccagggg accttcgaga ctggcttcta
     6661 tcgccgaatc cgcgatctcc tccaccgcca ggccgaaact tgcacgatcg acgcggaagc
     6721 gtggcagctg ctggaggatg aggcgcacag ccgccgttcg ccggcgccga tgctcgtcgc
     6781 cgcgggaagc tgacgcaatg gcctccgtcg agctgacccg ggccgccctc gccttcgacc
     6841 gcatagccga cgctttcgac gaccgcttcc gcccgtggca aagcgtcgcc gcgcagcggc
     6901 gctcggtccg aagcgaactt ctcgacgcct tcgctccggg agcgagcatc gtcgagatcg
     6961 gcgggggcac gggcgaggac gcgctgtggc ttgccgacaa cggccgtcgc gtactcctca
     7021 ccgacgtctc gccgcgaatg gtccagcgag cgcgcgcgaa attcgccggc cgaccggagt
     7081 tgcgggctga ggttgccgct gcagagacca tcgatcttgg cggcgagcgt ttcgatggtg
     7141 ccttctcgaa tttcgcggcg ctcaattgcg tcgacgacct cgcgcccgtt gcgcgcggac
     7201 tggcgaagct ggttcggccc ggcggcgctg tagtgctggt ggtgttcggc accttttgcc
     7261 cggccgaatg gatcgtcgag gcagttcggc atcggcccag cgcgatggtc cgccgcttcc
     7321 ggcgcggcgc cgtcccggcc cggctctccg ggagcaattt ttgcgtccgc tatttcaccg
     7381 cgcgcgagct gacgtcggca atggcgccgt ggttcgacca tgccggccag cgcggaatag
     7441 gcgtgttcgt tccgccgagc gcggccgaac cgtggatttc tggccggccg cgcctgttgt
     7501 ccacgctgga ggctctcgac gaacggcttt cgaggccgct tgcggtgctt ggcgaccatg
     7561 tgcttcaccg cttcgtgcgc cgatcggatg cctgaggcta tgctggacgt gaagctggcc
     7621 agcttcgccg cggcctatgc ggaacaccgt gagtacgagg gccgtcggct ggcggaagcg
     7681 gacctgctgg ctttgccctg gctgagaaac ggcccgcacg cacgccaatg ggcggttcga
     7741 gcgcggacgt tcgagacatt cctcgacaga ttgctcgaac cgacggccgc tgccatggcc
     7801 cgcccattga cggtgctcga ccttggcgcc ggcaacggct ggctaagcca tcgagtcgcc
     7861 gccctcggcc attcggctat cgctctcgat attcgcgggg acgatgtcga tggtcttggt
     7921 gcgggcgatt ggccgactca tttcgagcga atcctcgcct cgttcgatgc aatcccgctg
     7981 gctgacgaca gcaccgacat gaccgtcttc aatgcctcgt tgcattatgc gctcgatttg
     8041 ccggctgcgc tcgccgaggc gaagcgggtc acccgctgcg gcgggacgat cgcgatcctc
     8101 gattccccct tctaccgccg ggaaagtgac ggcgaggcca tggtcgcgga aaagcgcggg
     8161 agcgcgcgcg agcaattcgg cgatcgcgcg gaagcgctga cgtcgctcga ttgcatcgag
     8221 ttcctgactc ccgcgcgcct ggcggcggcg tccggcatgg agtggcgcag gcgccgagtg
     8281 ctttacccgc ttgcctacga gcttcggccg ctggtggcgg cgctatcggg gcggcgcccg
     8341 ccttcgcgct tcgacctgtg gacggcagag gttcgatgat cgtcctcgtc aacccgcgcg
     8401 ctacgaggcc ggcgaaccgc cgcttcccgc tgtcgctgat ggcgatcgga gcggcgcttc
     8461 cgccggagcg aagctgggaa atcgtcgacg gcaacctgcc ggacatggac cctctggaag
     8521 agatcgcggg gatcgtgtca cgccagaaag cgagcggcga cccggtcgag gcgatagccc
     8581 tcacggtcat gccggggccg cagctggtca gcgcggtgcc gctttcgcgg gcactcaagc
     8641 agcgtttccc cggcttgccg atcatctggg gcggcaattt cggaagcctc taccccgcgc
     8701 cagtgctcaa cgcgccctac gtcgactggc tggttcgagg ccagggggag cacagcttcg
     8761 tcgagctgct cgatgtgatc gccggaaagc gcgatccgga ttcggttgca gggattggat
     8821 ttcgagacgc ggacggcggc cacgtcctca ctccggaacg gccgtgggtc gggcctgacg
     8881 acttggccga tccgccctat cacaagatcc cggtcggcga gtatctccac ccgaccttcc
     8941 tcggccgccg ctcaggagtt taccaggcgt cgatcggctg tccgttcggc tgcaatttct
     9001 gcggagtcat cgctgttttc ggccgccgcg agaaagtcca gtcgccggcc cgaatggccg
     9061 ccaacctcgc cttcctgtcg cgcgagcacg gaatggattc ggtgcacttc tacgacaata
     9121 atttcttcct caacgaccgc catgcccgtg aaattgcggc cgcgctcgcg ccgctggggc
     9181 ttcgctggtg gtgcgaagcg cgggtcgaca ccctgtgccg cttttccgac gacacctggc
     9241 gcatgctccg caaagccggg ctggcgatgg tcttctgcgg cgccgagtcc ggatccgacg
     9301 aagtgctggc gcggatgaac aaggggacga ccaccgacca gatcatggag gtcgcccgcc
     9361 gcacccgcga gcatggcatc gtccccgaat tcagcttcgt gttcggcgac cccgaggcgc
     9421 ccgaagccga gatcgagaac acgctccgct tcatccgcag gctcaagtcc gcaaatcccg
     9481 cgatggagct gatcagctat ttctacacac ctacgccgca gcgaagcggg acttacgggg
     9541 gagtcgaccc gctgtcgggg actcccgacc ggctcgagga gtggatccag cccgaatggg
     9601 tcgactggat gacccatgtg aacccgcaaa cgccgtggct gagcccggcg gcgcacaacc
     9661 gtgtcacgga tttcgagacg gtcctcaaga gccgcttccc atcggtccac gacaagcgga
     9721 caaggcggtg gggcaaggcg cttggaagcc tcgccgcgcg ccggcgctgg gcactcggga
     9781 attacgacga cccggcctta ttgcgcgcga tccgccgagc ggcgcaggtc gagcccgacg
     9841 acagccaagc ctacggccat ctcagggctg ctgccgaata ggtcagcgcc gcgctgccga
     9901 gcgcagcagc ccgcgcgctc gcactgcgtg gatccccgcc gattttcgga acgagccagg
     9961 ctccggcacg atgtcggcgg ccaggcgacg caaccagccg ccggcaccgc tggtccaggc
    10021 ataatgttcg cgaaccgagg gccgatcgat tccgtgcgcg gtcgcgggtc gcattccggc
    10081 gacgagccgc ctgatcgcga gcggcgcctg ggctgcgcat ttctcgacta ccgcttgcgg
    10141 aatgtcagcg ggcgaaagcc gacgggcgag ggctagtgca ggaaaggcga atgcgaggct
    10201 tccggtgacg cgcccggcct cgaggaactc gtcccagtcg aggtcccccg ccgctcggcc
    10261 cgcacgtgcc accagcacga tctcgaccaa cctgagtagc gtcagattgt ggaaccccga
    10321 tccggcatgt gcggcaaggt ggaggaggag cgcaggctgg cctagccagc tggcaccggg
    10381 aaacgggccg gactccctcc tgctcgactc ctgcaaggcc gaaagccttg cggtagcggc
    10441 tccgggcggg ccgacgacgt cgagcgaata atgcaggtcc agcgaccagg gatcgtcggc
    10501 ctcgacggaa atcgcagtcg ccggatcgcg ggctgaatcc gcgagctgcc aggttgtctc
    10561 caacggcgtc cgcgcaattc gccgaaatcc caaggcttcg agctctgctt cggccccggc
    10621 cgcgtcggcc cgggatacga ggaa
//
LOCUS       DATAKH010000242         6926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_34783,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000242 DATAKH010000000
VERSION     DATAKH010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6926
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34783"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2397
                     /locus_tag="VHN55_10385"
     CDS             <1..2397
                     /locus_tag="VHN55_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX2804367.1"
                     /translation="GALLAVLVVFIFLRDIRATAIAAIAIPLSAIPAFWFMELMGITL
                     NSLSLLALGLVAGVLVDDAIVEIENIVRHMRMGKSAYQASIDAADEIGLAVLATTMSI
                     VAVFLPVALMPGISGQFFKNFGYTVVLAVLMSLFVARMITPMIAAYFLKAKGHQSHGE
                     GWLMDRYMDVLHWSLDATKARAMRRQLEPVRLKFGYWLVEFVVVLLVIAAFFMTIKSL
                     PALLAPVGLPTLVSLAIAFLAAVAAGYVMARLLGLAIRALAMVRTQWFGGVAAYHNFF
                     SSRFAARGRDHRFWIIGIAIISFVVTIGLFMSLPSQFFPTTNSDYSRVRVEMVPGTTL
                     KQTEAVADKVAAIINEQPETLNALESIREGSAFIFITLKKDRERTSIEYERDVAPRLA
                     AVADARVSFLSQSGGGGTGRDISIMLSGSDPVLLQRTASKLVEEMGTLQEVRAPRINA
                     DMRRPELIIKPRLDLAAQLGVTTAALSQTIRIATMGDINQNSAKFSLSDRQVPIRVML
                     PETSRRDLDTIRNLPVPIASGGSVPLSRIAEIGFGSGPTTIQRYNQNRRIFVGADLAP
                     DVIKSDAMEKINALPTMKNLPSGVSNAPFGEDEWQAEMMQNFIVALASGILLVFAVLV
                     LLYRRFMSPLVNMGSLLLAPLGGLLALLIFGQPLSLPVFIGILMLFGIVAKNSILLVD
                     FALEEMERGTRKFEALIEAGHKRAQPIVMTTVAMVAGMVPTAISLTGDAAWRAPMGTV
                     VIGGLIMSTLLTLLIVPAAFSLADGLEKRLGPWLRKRVLTYDPGDRHHPPRQAPLPAE
                     "
     gene            2429..3685
                     /locus_tag="VHN55_10390"
     CDS             2429..3685
                     /locus_tag="VHN55_10390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HEX2804368.1"
                     /translation="MTPAALARFNPAQPGARGMKIAATGLLVAMAVIFFASRALQPDY
                     PWLAWVKAFAEAAMVGGLADWFAVTALFRHPLGLPIPHTAIIPRNKDRIGEALANFIN
                     ENFLIPSVVARRMRNIDIAGAAGRFLRTPAAEGARIRHGASRLIADIFEGLDDERLGG
                     IVKGAIAQRIEKMEVAPLLGHALASAINEDRHVPMLEAAIRWMARALDANETLIREMV
                     HKKANWVLKLAGLDAKLADAILDGLRKLTAEMSTDPAHPVRKKVEEALAQLANDLQTN
                     AETRAKVEEMKEQLLANRSVALWIDSLWQRGREAIIRAARNPDAALAGRLGEVLRSMG
                     ASLEQDPRIRSAINQFVRRAAAGMAQSYGSSIVKLVSETIRSWDARTVTARLEAAVGR
                     DLQYIRINGTLVGGLVGLAIHALDRI"
     gene            3773..6247
                     /locus_tag="VHN55_10395"
     CDS             3773..6247
                     /locus_tag="VHN55_10395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007404843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX2804369.1"
                     /translation="MPNKSLLLSGAAFLLLTAAANAQDSTQQPAVNQQQAQPEAGESE
                     IIPDDEEDGQTVVVTGAKPRGSAIGDIPPEETLTSRDVQATGATDINELLEALAPQIG
                     SARGRGGERPVMLLNGKRVSGFRELRDIPTEAISRVDILPEEVALKYGYPANQKVVNI
                     VLRPRFQSTAALLSGKAATGGGYAGATGDVTRLMIGEKGRTSVNLHAEGNGMLTENER
                     DILVEQPPEGADIDDVQAARSLLGSGRELRGAVTVNRELGQVGATGNIELEHSEGRSL
                     IGLGDTLVEPLARNTAADSAHAGVALEGNLNAWRWSVTGNADAQRNVTRTDRDSVDVR
                     DRAISKTLSGDLDATAHGHLFRLPAGDASATFKVGASTLHLDSDRRRNGVETSGSLGR
                     STGTASVNLDLPISRRNGDFGPLGNLSLNGNAEVEELSDFGTLTTIGAGANWSPAVGL
                     NLIGSWSQEEGAPSVRQLGDPVLETPGARIFDFTRGETVLVTAITGGNSALAADRRNV
                     FKLGANWRPFPDTDLRLRADYVHSKLERPISNFPGPTPTLEAAFPDRFVRDDDGNLVS
                     VDLRPVNYDSARRDTLRIGFNFSKPLKSAPPSQAAIEAFRARRAGDGQSARTEGGPPP
                     AEAGEGGRGPGGRGFGRFGGGRNGGRLTFSLTDTITLVDNVTVRDGLKLDYLRGDAVG
                     QGGGRPRHEIEARAGYFNNGIGARVSADWRSGTQVRSASGDELHFSPVATFDLRLWAN
                     LGQKLDLVAKHPWLRGSSVRFQVDNIFDTKPKVRDAFGGVPLGYQPDLLDPLGRTVSI
                     TFRKLFLPPPSFFRRSESASGGGGED"
     gene            6310..>6926
                     /locus_tag="VHN55_10400"
     CDS             6310..>6926
                     /locus_tag="VHN55_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013038734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEX2804370.1"
                     /translation="MTTPQPIRGMQSLLGEDADRMAAVVAAFDRVRRLYGFKRVEVPV
                     LEATEVFARTMGETTDVVSKEMYSFEDRSGDSVTMRPEFTAGIARAYLSEGWQQHAPL
                     KVAAHGPAFRYERPQKGRFRQFHQLDAEVIGAGEPAADVEILALGDQLLKELGISGVT
                     LQLNTLGDAATREAWRTALVEHFRGAADTLSDDSRDRLERNPLRIL"
BASE COUNT         1205 a         2297 c         2217 g         1207 t
ORIGIN      
        1 ggcgccctcc tcgccgttct cgtcgtcttc atcttcctcc gcgacatccg cgcgaccgcc
       61 atcgccgcga tcgcgatccc gctctcggcg atccccgcct tctggttcat ggagctgatg
      121 gggatcactc tcaactcgct gtccctgctc gcgctcggcc tcgtcgccgg cgtgctcgtc
      181 gacgacgcga tcgtggagat cgagaatatc gtccgccaca tgcggatggg aaaatcggct
      241 taccaagcct cgatcgacgc cgccgacgag ataggccttg cggttctcgc aacgacgatg
      301 tcgatcgtgg ccgtgttcct cccggtggcg ctgatgccgg gcatttccgg tcagttcttc
      361 aagaacttcg gctacacggt cgtcctcgcg gtgctgatga gcctgttcgt cgcgcgaatg
      421 atcacgccga tgatcgccgc ctatttcctc aaggcaaaag gccaccagtc gcacggcgaa
      481 ggctggctga tggaccgtta catggacgtc ctgcactggt cgctcgacgc gaccaaggcg
      541 cgggcgatgc gaaggcagct cgagccggtg cggttgaagt tcggctattg gctggtcgaa
      601 ttcgtggtgg tcctgctcgt catcgccgct ttcttcatga cgatcaaatc gctgcccgcc
      661 ctgctcgctc cggtcgggct tccgaccctg gtgtcgctgg cgatcgcctt cctggcagct
      721 gtcgcggcgg gatatgtgat ggcgcgcctc ctggggcttg caatccgcgc gctcgcgatg
      781 gttcggactc agtggttcgg cggagttgcg gcctaccaca acttcttctc ctcgcgcttc
      841 gccgcgcggg gccgggatca ccggttctgg atcatcggaa tcgcaatcat ttccttcgtc
      901 gtgaccatcg gcctgttcat gtcgctcccg agccagttct tcccgacgac gaactcggac
      961 tacagccggg tccgggtcga gatggtgccg gggacgaccc tcaagcagac cgaggccgtc
     1021 gccgacaagg tcgcggcgat catcaacgag cagcccgaaa ccctgaacgc gctcgagagc
     1081 atccgcgaag gctcggcctt catcttcatc actctgaaga aggatcgcga gcgcaccagc
     1141 atcgagtacg aacgcgatgt cgctccgcgc ctcgcggcgg ttgcggacgc gcgagtgagc
     1201 ttcctgtcgc agagcggcgg cggcggcacc ggtcgcgaca tctcgatcat gctttccggc
     1261 tcggacccgg tgctgcttca gcggaccgcg agcaagctgg tcgaggaaat gggcacgttg
     1321 caggaggtgc gcgcaccgcg gatcaacgcc gacatgcgcc ggcccgaact gatcatcaag
     1381 ccgcggctcg accttgcggc ccagcttggc gtgactactg cggcattgag ccagaccatc
     1441 cgaatcgcga cgatgggcga catcaaccag aacagcgcga aattctcgct gtccgatcgg
     1501 caggtgccga ttcgggtgat gcttcccgaa acgtcgcgcc gcgacctcga cacgatcagg
     1561 aaccttcccg tcccgatcgc cagcgggggc agcgttccgc ttagccgaat tgccgagatc
     1621 ggctttgggt ccgggccgac gaccatccag cgctacaatc aaaaccggcg aatcttcgtc
     1681 ggcgccgacc ttgctccgga tgtgatcaag agcgatgcga tggagaagat caacgctctg
     1741 ccgaccatga agaatcttcc gtcgggcgta tccaacgcgc cattcggcga ggacgaatgg
     1801 caggccgaaa tgatgcagaa cttcatcgtc gcgctggcgt ccggtatcct gctcgtgttc
     1861 gccgtcctgg tgctccttta caggagattc atgtcgccgc tggtgaacat gggctcgctt
     1921 ctgcttgctc cgctcggcgg tctcctcgcg ctgctgatct tcggccagcc gttgtcgctt
     1981 ccggtgttca tcggaatcct gatgctgttc gggatcgtcg ccaagaactc gatcctgctc
     2041 gtcgactttg cgctggagga aatggagcga ggcaccagga agttcgaagc gctgatcgag
     2101 gccggccaca agcgtgccca gccgatcgtc atgaccaccg tggcgatggt cgcgggcatg
     2161 gtgccgacgg cgatttccct gacgggcgac gcagcctggc gcgcgccgat gggtaccgtg
     2221 gtgattggcg gcctgatcat gtcgactctc ctcaccctgc tgatcgttcc ggcggccttc
     2281 agcctcgccg acgggctcga gaagcggctc ggcccgtggc tacgcaagcg agtcctcacc
     2341 tacgatcctg gcgaccgcca tcacccccct cgacaggcgc ccttaccggc ggagtgattc
     2401 cgtcgcggga ggccgctaag gcggtgccat gactccggca gcactcgccc gtttcaatcc
     2461 tgcgcagccc ggcgccaggg gcatgaagat cgcggcgacc ggcctgttgg tcgcgatggc
     2521 ggtgatcttc ttcgcgagcc gggcgctcca gccggactat ccgtggctcg cctgggtcaa
     2581 ggcgttcgca gaggcggcga tggtcggcgg acttgccgac tggttcgcgg tgacagcgtt
     2641 gttccggcac ccgctaggcc tgccgatccc ccacactgcg atcatcccgc gaaacaagga
     2701 ccggatcggc gaagccctcg ccaatttcat caacgaaaat ttcctcattc cttccgtcgt
     2761 cgcccggcgg atgcgcaaca tcgatattgc gggcgcggcc gggcggtttt tgcgcactcc
     2821 ggcggcagag ggagcgcgaa tccgtcatgg cgcctcgcgg ctgatcgccg acattttcga
     2881 agggctcgac gacgagcggc ttggcgggat cgtcaagggg gcgatcgctc agaggatcga
     2941 gaagatggag gtggcgccgc tgctaggtca tgcgctcgcc tccgcgatca acgaggaccg
     3001 acatgtgccg atgctcgagg cagcgatccg ctggatggcg cgggcgctcg acgccaacga
     3061 aacgctgatc cgcgagatgg tgcacaagaa agcgaactgg gtgctcaagc tcgccggcct
     3121 cgacgccaag ctcgccgacg cgatcctgga cgggcttcgc aagctgaccg ctgaaatgtc
     3181 gaccgatccc gcgcatccgg tccgcaagaa ggtggaggag gcgctggcgc aacttgccaa
     3241 cgacctccag accaatgccg agactcgcgc aaaggtcgag gagatgaagg agcagctcct
     3301 ggccaaccgc tcggtcgcct tgtggatcga ttccctctgg caaagaggac gcgaggcgat
     3361 catccgcgcc gcacgcaatc ccgatgccgc gctcgccggc cgcctcggcg aagtgctccg
     3421 ctcgatgggc gcatcgctgg agcaggatcc caggatccgt tccgccatca accagttcgt
     3481 ccgccgtgcc gcggcaggga tggcgcaaag ctatggaagc tcgatcgtca agctcgtctc
     3541 cgagaccatc cggagctggg atgcgcggac ggtcactgcg cggctggagg cggcggtcgg
     3601 ccgcgacctc caatatatca gaatcaacgg aacgcttgtc ggcggcctcg tcggactcgc
     3661 gatccacgcg ctcgacagga tctgattgcc gttcgtcggc ttgcgaatcc cgtccgtcga
     3721 aactgctggg atggtcagcc gcgattcacg ttgcgcggac gatcacgccg gcatgccaaa
     3781 caaatcgctt cttctttcag gtgccgcatt cctgctgctc acggccgcag caaacgcgca
     3841 ggattcaacc cagcagcctg cggtgaacca gcagcaggcg cagcccgaag ctggcgagtc
     3901 ggagataatt cccgatgacg aggaggacgg ccagacagtc gtcgtaaccg gcgccaagcc
     3961 gcgcggctcc gcgatcggcg acatcccgcc ggaagaaacg ctgacgagcc gcgacgtgca
     4021 ggcgaccggc gccaccgaca tcaacgagct cctcgaggcg cttgcgccgc agattggaag
     4081 cgcgcgaggc cgcggtggcg agcgccccgt gatgctactc aacggcaagc gggtctccgg
     4141 cttccgtgag ttgcgcgaca ttcccaccga agcgatcagc agggtcgata tcctgcctga
     4201 ggaagtggcg ctgaaatacg gctatccggc caaccagaag gtcgtgaaca tcgttttgcg
     4261 cccgcgattc cagtcgactg ctgcgctcct cagcggcaag gccgcgaccg gcggcggcta
     4321 tgccggtgcg accggcgacg tcacccggct gatgatcggt gaaaagggcc gaacgagcgt
     4381 caacctccac gccgagggca acggaatgct caccgaaaac gagcgcgata tcctggtcga
     4441 gcagccgccc gagggcgcgg acatcgacga tgtccaggcc gctcgctcgc tgctcggctc
     4501 gggacgtgaa cttcgcggcg ccgtcaccgt caaccgcgag ctcgggcagg tcggagcgac
     4561 aggaaatatc gagctcgaac atagcgaggg ccgctcgctc atcggactgg gcgacactct
     4621 ggttgagccg cttgcccgca acacggcagc cgacagcgct cacgccggag tcgcgctgga
     4681 agggaatctc aacgcctggc gctggtcggt gaccggcaat gccgacgccc agcgcaatgt
     4741 cactcggacc gaccgcgact ccgtcgatgt tcgcgaccgg gcaatctcca agaccttgtc
     4801 cggagacctg gacgcgactg ctcacggcca cctgttccgc cttccggcgg gcgatgcgag
     4861 cgccactttc aaggtgggtg ccagcaccct gcacctcgac agcgatcgca ggcgcaacgg
     4921 ggttgagacc tccggttcgc tcggccgatc cactggcacc gcctcggtca acctcgacct
     4981 gccgatttca cgccggaacg gcgatttcgg gccgctcggc aatctcagcc ttaacggcaa
     5041 tgctgaggtc gaggaactgt cggacttcgg cacgctgacc accatcggtg ccggcgcgaa
     5101 ctggtctccc gctgtcgggc ttaacctgat cggcagctgg tcccaggagg aaggcgcgcc
     5161 cagcgtccgc cagctcggcg atccggttct cgaaaccccg ggcgcgcgca ttttcgactt
     5221 cacgagaggc gagacggtgc tcgttaccgc gatcaccggc ggcaattcgg cgctcgccgc
     5281 cgaccggcga aacgtgttca agctaggcgc gaactggagg ccgtttccgg acaccgacct
     5341 caggctgagg gccgactatg tccattcgaa gctcgagcgc ccgatctcga atttcccggg
     5401 accgacgccg accctcgagg ctgccttccc ggaccgcttc gttcgcgatg atgacggcaa
     5461 tctggtcagc gtcgacctgc gacctgtcaa ttacgacagc gcgcggcgcg acactctccg
     5521 gatcggattc aacttctcca agccgctcaa gtcggcgccg ccctcccagg cggcaatcga
     5581 agccttccgc gcccgccgcg ccggcgacgg ccaaagtgcg cgcaccgaag gcgggccgcc
     5641 cccggccgaa gctggcgagg gaggccgcgg ccccggaggc cgcggcttcg gccgcttcgg
     5701 cggcggccgg aacggcggac gcctgacctt ttcgctgacc gacacgatta ctctcgtcga
     5761 caacgttacc gtccgcgacg gtctcaagct cgactatctt cgcggggatg ccgtcggcca
     5821 gggtggcgga cggccgcgtc acgagatcga agcgcgcgcg ggttatttca ataacggcat
     5881 cggagcgcgg gtttcggcgg attggcggag cggaacgcag gtgagaagcg cttcgggtga
     5941 cgagctccac ttctcgcccg tcgcgacctt cgacctgcgg ctatgggcga acctcggcca
     6001 gaagctcgac ctcgtggcca agcatccgtg gcttcgcggt tcctcggtcc gctttcaggt
     6061 cgacaatatc ttcgacacca agccaaaggt tcgggatgcc ttcggcggcg tgccccttgg
     6121 ctatcagccc gatcttctcg acccgctcgg ccggacggtc agcatcacgt ttcgaaagct
     6181 gttcctgccg ccaccgagct tcttccgaag gagcgagtcc gccagtggtg gaggaggcga
     6241 ggactagcgc accggcgctg gccccacgca ttccttccct ttgcccgagg tttttgccat
     6301 gcgctcggca tgacgacgcc acaaccgatc cggggcatgc agagcctgct tggcgaggac
     6361 gccgaccgaa tggccgcggt ggttgcggcg ttcgaccgcg ttcgccggct ttacggattc
     6421 aagcgcgtcg aggtgccggt tctggaagcg accgaagtgt tcgcccgaac gatgggcgaa
     6481 accaccgacg tcgtctctaa ggaaatgtac agcttcgagg atcgaagcgg cgattcggtg
     6541 acgatgcggc ccgagttcac cgccgggatc gcgcgagcct atctgtcgga agggtggcag
     6601 cagcatgcgc cgctgaaggt cgcggcgcac ggcccggcgt tccgatacga acggccgcaa
     6661 aagggacgct ttcgccagtt ccaccagctt gacgccgaag tgatcggtgc cggcgaaccc
     6721 gcggccgacg tggagattct cgcacttggc gaccagcttc tgaaggaact gggaatcagt
     6781 ggcgtaacgc tccagctcaa tactctgggt gatgccgcga cgcgcgaagc atggcgaacg
     6841 gcgctcgtcg agcatttccg cggcgcagcc gacacacttt cggacgacag ccgcgaccgg
     6901 ctcgagcgca atccgctgcg gatcct
//
LOCUS       DATAKH010000243        15804 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_14386,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000243 DATAKH010000000
VERSION     DATAKH010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 15804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15804
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14386"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..588)
                     /locus_tag="VHN55_10405"
     CDS             complement(<1..588)
                     /locus_tag="VHN55_10405"
                     /inference="COORDINATES: protein motif:HMM:NF013506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEX2804371.1"
                     /translation="MKFVSAVWKLLVGIKDAFVLLLMLLFFAVLYAVLSSRPAALTDG
                     VLALDLNGTVVEQPSKPTYADLAGAGTPLREYRLRDLVAALDSARDDDRVKAVALDLE
                     TFTGGGQVAMTDLASAIRRVRDSGKPVIAYAVGYTDDSYLLASAATEVWLDPLGLVAI
                     AGPGGQNLYFKGLLDKLGVTANVYRVGTYKAAVEPY"
     gene            685..2082
                     /locus_tag="VHN55_10410"
     CDS             685..2082
                     /locus_tag="VHN55_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEX2804372.1"
                     /translation="MEAAIESGPAGESPWLKELRAMLRLAWPLILANLTQQLIQATDV
                     ILLGRLGEIELAAATLALNMSFTINVLLLGLLLASSPMMATALGRRSNSIRDVRRTFR
                     AGLWLLLLAMPPYWLLLWNAAPIMRGFGQSAELAEAGQTFLRAYMWCTAPWLLFQLLR
                     NFVAALERPRVILLLSFAGIALNALLSWALIFGRLGMPALGLTGAGLGSTLTWLIACA
                     ALIAVIQKQRLFRRFHLWGRWWRFDWERTLAMVRLGAPIGITMALEMGVFALAAYFMG
                     WIGSPAVAAHAIALQIAAVTFMIPMGLGQAATVRVGRALGAGDLPAITRAGWTAWIVG
                     VMFMAVMALAMWTFPRQLVGLFLGSSANNQVADLAVTFLGVAAAFQLVDGAQVIGAGM
                     LRGLHDTRWPLVFALVGYWVVGLGIGAWLGFGRNWQGLGIWIGLASGLACVAMLMLVR
                     WMLRDRLRLAEYHPA"
     gene            2240..2527
                     /gene="groES"
                     /locus_tag="VHN55_10415"
     CDS             2240..2527
                     /gene="groES"
                     /locus_tag="VHN55_10415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019517120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEX2804373.1"
                     /translation="MGFRPLHDRVLVRRVEAEAKTAGGIIIPDTAQEKPQEGEVVSVG
                     TGARGDDGKVTPPDVKAGDKILFGKWSGTEVKIDGEDLIIMKESDILGIVG"
     gene            2602..4242
                     /gene="groL"
                     /locus_tag="VHN55_10420"
     CDS             2602..4242
                     /gene="groL"
                     /locus_tag="VHN55_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012049566.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEX2804374.1"
                     /translation="MAAKDVKFSRDARERILKGVDILADAVKVTLGPKGRNVVLDKSF
                     GAPRITKDGVTVAKEIELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVRE
                     GMKSVAAGMNPMDLKRGIDIAVKKVVDDLAKRSKNVSGSNEIAQVGTISANGDTEVGE
                     KIAEAMEKVGKEGVITVEEAKGLEFELDVVEGMQFDRGYLSPYFITNPEKMQVELTDP
                     YILIHEKKLSNLQAMLPILEAVVQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAV
                     KAPGFGDRRKAMLEDIAILTGGEMISEDLGIKLENVTTGMLGTAKRVTIDKDNTTIVD
                     GAGTSEAIKARTEAIRQQIENTTSDYDREKLQERLAKLAGGVAVIKVGGATEIEVKER
                     KDRVDDALHATRAAVEEGIVPGGGSALLYATKSLEGVKGANDDQTRGIDIVRKALYSP
                     VRQIAQNAGHDGAVISGKLLEGKDFEQGFNAQTDTYENLVKAGVIDPTKVVRTALQDA
                     ASVAALLITTEAAVSELPDDKPAPAMAGGMGGMGGMDF"
     gene            complement(4300..5178)
                     /locus_tag="VHN55_10425"
     CDS             complement(4300..5178)
                     /locus_tag="VHN55_10425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804375.1"
                     /translation="MGPVALRIAAICAAVLSTGAQAAAEPTVLKMEQFRRSVAVRVEV
                     AGKERLFQFDTGGAISFISPEVATEIACEKGARVVGFRMTGDKLQAPRCDDVSVGIGG
                     HRFTIPVAGVYQVGEFNAKGVTVDGLLALDVFAGRTITIDSAGLRLIIETPASAAERT
                     ARATELPARLVRELGGYGLAVDVQVPSKVGHLGFQLDSGNGGTILVAKPYAAAFGLDP
                     DKGPQQGQIDIGKGIVAEGLVFPAGITLDGNLGMPFLKNYLVTLDLEHGRVWLAPNPV
                     APPPGMGVPPEGPPPK"
     gene            complement(5213..6343)
                     /gene="zapE"
                     /locus_tag="VHN55_10430"
     CDS             complement(5213..6343)
                     /gene="zapE"
                     /locus_tag="VHN55_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011952145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HEX2804376.1"
                     /translation="MTGPVGRAYSRLLSDGELKPDPAQQRAVVALDRLAQALGNSGRG
                     LLGLFGKRSRGPDGVYLWGGVGRGKSMLMDLAFAHIGVEPKRRVHFHAFMIQTHDRLK
                     SARKRDERDPLEAVADAIAEGAKLLAFDEMQVTNPADAMILSRLFEKLLEREVRIIAT
                     SNRPPSDLYKDGLNRELFLPFIAKIETSFEVVEVNGPTDYRLDRLAGVEVWHVPNGPQ
                     ATQALSKAFFQLTDYSVEDRDKVPSEELEVGGGRSLHVPKSLKGVAVFSFKRLCGQPR
                     GAADYLAIAQRFHTVIIVGIPVMGPEMRNEASRFVTLVDALYEHRVKLLASADADPAA
                     LFPKGDGSFEFQRTVSRLEEMRSAGYLAEGHGVVHDRDSGEA"
     gene            complement(6340..6834)
                     /locus_tag="VHN55_10435"
     CDS             complement(6340..6834)
                     /locus_tag="VHN55_10435"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF025008.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX2804377.1"
                     /translation="MTQTPGSGAGLEDVGLPTGAKEDPDNPGWYSWGDFPPSSFAAAT
                     GRLLFRPHGAGRGVCRMTPTEAHMNMGGSIHGGAVMSFIDMAMFAGGRCAGMAQGHYV
                     TLDMTTHFLARGRAGIPLDAHVELVKQTRGHVFLQGVVRQGDEPCYSFTGTLKRIRDR
                     NAPA"
     gene            complement(6866..7645)
                     /locus_tag="VHN55_10440"
     CDS             complement(6866..7645)
                     /locus_tag="VHN55_10440"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018075230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEX2804378.1"
                     /translation="MAEFTLPRNSKITRGRTYKPETGKTLRTFKVYRYDPDNSANPRW
                     DRYTIDLDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNMEGRNGLACTTP
                     IADLKGEVQITPLPHMEVVKDLVPDLSHAYAQYASVQPWLKTVTSAPSGKERLQSPED
                     RAKLDGLYECILCFCCTTSCPSYWWNADKFLGPAVLLQAYRFIVDSRDEATGERLNEL
                     EDPYRLYRCHTIMNCANVCPKGLSPAKAIAETKKLIAERAA"
     gene            complement(7698..8165)
                     /locus_tag="VHN55_10445"
     CDS             complement(7698..8165)
                     /locus_tag="VHN55_10445"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2804379.1"
                     /translation="MIGEGDRAPDLDVETSAGRTINLSRPGKPLVLYFYPKDDTSGCT
                     REAQDFTALAADFGKAGAEIVGVSRDPMKRHEKFIGKYDLKVPLASDEDGRISDAFGT
                     WVQKSMYGRKYMGMERSTFLIGADGRVVKEWRKVKVPGHAEEVLGAVKKHAIV"
     gene            complement(8162..10852)
                     /locus_tag="VHN55_10450"
     CDS             complement(8162..10852)
                     /locus_tag="VHN55_10450"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HEX2804380.1"
                     /translation="MTSGAPKARRDAIERAKLHAPFLREAMAARPDIAETFLAEGPST
                     AAAQALETGGDSVATELRKRRRALALAVALGDLSGELALEQVTALLSDFADGAIDRAI
                     EAAIAELYPDEPPRGLSVIALGKLGSRELNFSSDVDLLLLFDPETLPRRDRDEAGDSA
                     VRIGRRVVELLQKRTEDGFVERVDLRLRPSPEATPIVLPVNAAVSYYESSAVGWERAA
                     FIRARCCAGDRRLGEAFLDAITPFIWRRALDFGAIEEVRTIGERIRDHYSERQRFGPG
                     FDLKRGRGGIREVEFYVHAQQLVHGGRDPELRIGATLPAIEALREAGFFDSDAAAMLS
                     DAYRRLRTAEHRVQMVDDRQTHLLPQGEAALANVAQLHGFDDGSDLLEWLRAPVEAVG
                     AAFDVLAEGSAERLPANVDALRSAVERLGIPDPDAAVRRVGEWRSGRPRSLRSAAATR
                     AFEGMLPALLEAIGKSPDPMRALNRLSDVVERVPSGVNLYRLLEARPKLTTLVARILA
                     HAPALSDQLARRPQLLDTLLDSSCFDPPPPAREFAAYLETEMRGQPYDVGLDRARRII
                     NERRFALGVQLIDMREDPLTVGKGYARVAEGALVALASAAVAEFEEAHGKFPGAELVV
                     LGLGRLGGEVLTNASDLDIVYLFTTPDSEASDGAKPLGPADYFNRLSNRVTAALSVPT
                     AAGPLYDVDTRLRPQGSQGMLSVSLEGFADYQRERAWTWEHMALTRARPVFGSEAARA
                     QASHLLADILGQPHEPAKLVADAVKMREDIARHKPPSGPLDVKLGEGGLVDLEFSVHV
                     LQLAHKCGFDPRLERAVEMLAKDGFIEQNVVEAQTLLTKMLVTIRLVAPETTSPSDES
                     LELMARACGAECWAGLLARHDEARHSISELWNRVKEGKLT"
     gene            10940..11098
                     /locus_tag="VHN55_10455"
     CDS             10940..11098
                     /locus_tag="VHN55_10455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804381.1"
                     /translation="MATAPIDMDRRPIRVDLPPEHAGVMAALRRAFQAAAEAPCDRDF
                     ADLLRKLN"
     gene            complement(11109..11744)
                     /locus_tag="VHN55_10460"
     CDS             complement(11109..11744)
                     /locus_tag="VHN55_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007704464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX2804382.1"
                     /translation="MAANEKTEPATDSSGEPIPLSDPEFKDQLAAVIPHLRAFGRSLS
                     GSRDLADDLVQETLLKAWAARKRFQAGTNMRAWTFIILRNLFLSQMRRARFKGEWDEL
                     TASKILAAPASQDRHIELADMQRALMHLPQPQREALILVGAGGFAYEEAAEICGCAVG
                     TIKSRVARGRVALEALLSSGKLPSRRQHKTDPDKSALQSIMGDVDELSRDL"
     gene            complement(11838..11978)
                     /locus_tag="VHN55_10465"
     CDS             complement(11838..11978)
                     /locus_tag="VHN55_10465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009821999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804383.1"
                     /translation="MKDEPTEHLTTTEARGASTPHMTRYVLGIGLALVVLIFAIMFLV
                     GG"
     gene            complement(12089..12886)
                     /locus_tag="VHN55_10470"
     CDS             complement(12089..12886)
                     /locus_tag="VHN55_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013847114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2804384.1"
                     /translation="MSLGQELAPHLPFLRRYARALTGSQTHGDAFVRATLEAIVAKPD
                     EFPRDVDPRLGLYKTFHAIWSTANVEEGEEPSDNTTGAESIAHARLSKITPLSRQALL
                     LTSLEGFSSDDAGYLIGASPDDVDSLVAEALSEIERQTLTEVLIIEDEPIIAMDIETI
                     VRDLGHNVTGVAVTRDEAVAQARQNPPGLVLADIQLADDSSGIDAVRDILAEFSVPVI
                     FITAFPERLLTGTRPEPTFLITKPFQRSTVKAAIAQALFFDAATVPA"
     gene            13186..13377
                     /locus_tag="VHN55_10475"
     CDS             13186..13377
                     /locus_tag="VHN55_10475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NepR family anti-sigma factor"
                     /protein_id="HEX2804385.1"
                     /translation="MSEKKVGEAGGAEVTGNGSGTRPPAKKRKKRAGDVGRALRSVYD
                     ETLREDVPDDFLDLLGKLS"
     gene            13401..14939
                     /locus_tag="VHN55_10480"
     CDS             13401..14939
                     /locus_tag="VHN55_10480"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF019205.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX2804386.1"
                     /translation="MPTAAQRFARLSTPAKLLLILTAALLPIGFGLGWVAYTGIREAN
                     AALQTQSAEKAQIAARSIESLIARDALALRIASNGRIDGPAPCERVQRSLTIAPAVAQ
                     KFRLESQDGGEMCSVGDIGDTGMLPQVAPGDIQLRVSPGEDSLALRVGVIGGSATTTI
                     MAGELRAAALGSDRDLRSAAINDGEREIDIMTAAERSAAGQKPSLTQWRIGNGQLLVE
                     IEGLVPTITTGDRLVILLPVVMWFIAALMTWLMVHRLLIQPLRRLQRAVSRYEPGESA
                     LELPSKLGPATEIQELRDAFARAVTRVQESEQEMTAALDGQRRLVREVHHRVKNNLQV
                     IASLLNIHGRTAETPAASAAYGSIGRRVGALSIVHRNHYAEMEENRGMSMRPLLSELS
                     AELRATAPESARGFQIDLDIEPLHTTQDVAVSVAFLITEVAEFAMLHRPDQPVEISLR
                     RTSDLTGRLALASPVLNPDSEEEQEKVQFERIIAGLAKQLRSTLDRKLGRYSVDMPVF
                     PPRS"
     gene            complement(15062..>15804)
                     /gene="tatC"
                     /locus_tag="VHN55_10485"
     CDS             complement(15062..>15804)
                     /gene="tatC"
                     /locus_tag="VHN55_10485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEX2804387.1"
                     /translation="VLFFVGMYFAKPIFGFLVQPLLAAGQGKVIYTDVPEAFFVDVKV
                     ALFAALMAGFPFFAIQIWKFVAPGLYAKEKRALLPFLILTPFFFVGGAAFAYYVAMPW
                     ALHFLLGPHFQSEVGGVQREALPAVGNYLSFSTRFLFGFGVAFLTPILLMILERAGII
                     RLEHLTRYRRYAVVACAGVSAVLTPPDAVSMLLLMVPLYSLYELAIVAIRVTHWRSAR
                     NASSGSAGQSEGPEAPPGGGRVGGSGPI"
BASE COUNT         2829 a         5119 c         5104 g         2752 t
ORIGIN      
        1 gtagggctcg accgcggcct tgtaagtccc cacccggtac acgttcgcgg tcacaccaag
       61 cttgtcgagc agccccttga aataaaggtt ctgaccgcca ggcccggcaa tcgcgacgag
      121 gccgagcgga tcgagccaca cttcggttgc ggccgacgca agcaggtaac tgtcgtcggt
      181 gtacccgacc gcataagcga tgaccggctt cccggaatcg cggactcggc ggatggcgct
      241 cgcaaggtcg gtcatcgcta cctgtccgcc gccggtaaag gtttccagat cgagcgccac
      301 ggccttgacc cggtcgtcat cgcgcgcgga atccagggca gcgacaaggt cgcgcaggcg
      361 atattcgcgc aacggggtgc cggcacccgc cagatcggcg taggtcggct tgctcggctg
      421 ctcgacgacg gtcccgttca ggtcgagcgc aaggactccg tccgtcaaag cggcgggcct
      481 gctcgaaagc acggcataga ggacggcgaa gaacagcagc atgaggagga ggacgaaagc
      541 gtccttgatt ccgacgagca gcttccacac cgcggaaaca aatttcattg ccttcacctc
      601 tttttcgctt gcttttcagc tagccgagca agggccgtct aaccaaatct tttcgtgtcc
      661 cgagcgcgcc gctagggcgc ttcgatggaa gctgcgatcg agagcgggcc ggccggcgaa
      721 tcgccgtggc tgaaagagct tcgggcgatg cttcggctcg cctggccgct gatcctcgca
      781 aaccttacgc agcagctgat ccaggccacc gacgtgatcc tactcgggcg cctcggcgag
      841 atcgagctcg cggcggctac tttggcgctc aacatgagct ttaccatcaa cgtgctgctt
      901 ctgggtctgc tgcttgcctc ctcgccgatg atggcaacgg cgctgggccg gcgatccaat
      961 tcgatccgcg acgtccggcg gacgttccgt gccgggctgt ggctgctgct gcttgcgatg
     1021 ccgccgtatt ggctgctgct atggaacgcc gcgccgatca tgcgcggatt tggccagtcg
     1081 gccgagcttg ccgaggcggg gcagacgttc cttcgcgcat atatgtggtg cactgccccg
     1141 tggctcctgt tccagctgct tcgcaatttc gtcgccgcgc tcgagcggcc gcgggtcatc
     1201 ctgttgttga gcttcgccgg aatcgccctc aacgcgctgt tgagctgggc tctcattttc
     1261 ggtcgtctgg gcatgccggc acttggcctg acgggagcgg gcctcggaag cacgctgacc
     1321 tggctgattg cctgtgccgc actgatcgcc gttatccaga agcagcggct gttcaggcgc
     1381 tttcacctgt ggggccgctg gtggcgcttc gattgggagc ggactctggc gatggtccgc
     1441 ctcggcgcgc cgatcgggat caccatggcg ctggaaatgg gcgtgttcgc cctcgccgcc
     1501 tatttcatgg gctggatcgg atcgccagcg gttgcggccc acgcgatcgc gcttcagatt
     1561 gccgccgtca ccttcatgat cccgatgggc ctcggccaag cggcgacggt acgggtcggc
     1621 cgcgctttgg gtgccggcga cttgccggca atcacgcgag cgggctggac cgcgtggatc
     1681 gtcggagtga tgttcatggc ggtgatggcg ctggcgatgt ggacctttcc ccgtcagctc
     1741 gtgggcctgt tcctcgggtc aagcgcgaac aaccaggttg ccgatcttgc cgtcaccttc
     1801 ctcggagtgg ccgccgcctt ccagctggtc gacggagcac aggtgatcgg ggcggggatg
     1861 cttcgcgggc ttcacgacac gcgctggccg ctggtgttcg cgctcgtcgg ctattgggtc
     1921 gtcggcctcg gtatcggcgc gtggctcggt ttcggccgta actggcaggg actcgggatc
     1981 tggattgggc ttgctagcgg gcttgcctgc gtcgcgatgc tcatgcttgt ccgatggatg
     2041 ctccgagacc ggctgcgcct ggccgaatat caccctgcct gagcccgacc ctgcctgagc
     2101 ccgaccccgg ggccaggcga aaaagaccgg ctccccggtg ttgacggatt aacggctcac
     2161 aaccatatcc gcgccatcgc tggcactctc gtgggtagag tgccagaaaa acgtttaact
     2221 cttgagagag gggctaacaa tgggtttcag gccgcttcat gaccgagtcc tcgtccgccg
     2281 tgtcgaggct gaagcaaaga ccgccggcgg gatcatcatt cccgacacgg cgcaggaaaa
     2341 gccgcaggaa ggcgaagtcg tctcggttgg caccggcgct cgcggcgacg acggcaaggt
     2401 tactccgccc gacgtcaagg ccggcgacaa gatcctgttc ggcaaatggt ccggcaccga
     2461 agtgaagatc gacggtgaag acctcatcat catgaaggaa agcgacatcc tcgggatcgt
     2521 cggctgacct tcgcttagcg acacgaaaat ggtcgctgat cgcgtgactt taatgacttt
     2581 aacgaacgaa agggtagcca aatggcagcc aaggacgtga aattcagccg cgacgcccgg
     2641 gaacgaattc tcaagggcgt cgacatcctc gccgatgcag tcaaggtgac gcttgggccc
     2701 aagggccgca acgtcgtcct cgacaagagc ttcggcgctc cccggatcac caaggacgga
     2761 gtcaccgtcg ccaaggaaat cgagctcaag gacaagttcg agaacatggg cgcgcaaatg
     2821 gtccgcgagg tcgcctcgaa gaccaacgac atcgccggtg acggcaccac caccgccacc
     2881 gtgctggccc aggcgatcgt ccgcgagggc atgaagtcgg tcgcggcggg catgaacccg
     2941 atggacctca agcgcggcat cgatatcgcc gtgaagaagg tggtcgacga tctcgcgaag
     3001 cgttcgaaga acgtttccgg atcgaacgag atcgcgcagg tcgggaccat ttcggccaat
     3061 ggcgacaccg aggtcggcga gaagatcgcc gaggcgatgg agaaggtcgg caaggagggc
     3121 gtgatcaccg tcgaggaggc caagggcctc gagttcgagc tcgacgtggt cgaaggcatg
     3181 cagttcgacc gcggctatct ctcgccttac ttcatcacca atccggagaa gatgcaggtc
     3241 gagctgactg acccgtacat cctcatccat gagaaaaagc tgtcgaacct tcaggcgatg
     3301 ctccctatcc tggaagccgt cgtccagtcg ggccgtccgc tgctgatcat cgccgaggac
     3361 attgagggcg aggctctcgc cacgctcgtg gtcaacaagc ttcgcggcgg cctcaaggtc
     3421 gctgcggtca aggcgccggg cttcggcgat cgccgcaagg caatgctcga ggatatcgcc
     3481 atcctcaccg gtggcgagat gatttccgag gacctcggaa tcaagctcga gaacgtcacc
     3541 accgggatgc tcggaaccgc caagcgggtc accatcgaca aggacaatac gaccatcgtc
     3601 gatggcgccg gcacttcgga ggccatcaag gcccgtaccg aggcgatccg ccagcagatc
     3661 gagaacacga cgtcggacta cgaccgcgag aagctgcagg agcggcttgc caagctcgcg
     3721 ggcggtgtcg cggtgatcaa ggtcggcggc gccaccgaga tcgaggtgaa agagcgcaag
     3781 gaccgcgtcg acgacgctct ccatgcgacc cgagccgcgg tcgaggaagg catcgttccc
     3841 ggcggcggaa gcgctctgct ttatgcgacc aagtcgctgg aaggcgtcaa gggcgcaaac
     3901 gacgaccaga cccgcggaat cgatatcgtc cgcaaggcgc tctattcgcc ggtccgccag
     3961 atcgcgcaga acgccggcca cgacggcgcg gtcatttcgg gcaagctgct cgagggcaag
     4021 gacttcgagc aggggttcaa cgcccagacc gacacctacg agaacctggt gaaggccggc
     4081 gtcatcgatc cgaccaaggt cgttcgcacc gctctccagg acgcggcctc ggtcgcggcc
     4141 ctgctgatca ccaccgaagc ggcggtcagc gagctccccg acgacaagcc cgccccggca
     4201 atggccggcg gaatgggcgg aatgggcgga atggacttct aagtccgacg ctcagtcgca
     4261 aaaagaaggg ccgggggagc gatcctccgg ccctttttgt cacttcggag gcggcccctc
     4321 aggtgggacg cccataccgg gcgggggcgc caccgggtta ggcgcaagcc acacgcgccc
     4381 atgctcgagg tccagagtca cgaggtaatt cttcaggaac ggcatgccca ggttgccatc
     4441 cagcgtgatg cccgcgggga agacgagccc ctccgcgact atccccttgc cgatatcgat
     4501 ctggccctgc tgcggtccct tgtcggggtc gagaccgaag gcggccgcat agggtttggc
     4561 gactaggatc gtgcccccgt tgccgctgtc cagctggaaa ccgaggtgcc cgaccttgct
     4621 tggcacctga acatccacgg caaggccgta gccgcctagc tcgcggacca gccgcgcggg
     4681 aagctcggtt gctcgggcag tccgctctgc tgcgctcgcc ggagtctcga tgatcaggcg
     4741 caacccggcg gagtcgatcg tgatcgtcct cccggcgaag acgtcgagag cgagtagccc
     4801 gtcgaccgtg acgcctttcg cattgaactc gccgacctgg tagacgccgg caaccggtat
     4861 ggtgaaacga tggcccccaa tcccgacgga gacgtcgtcg cagcgaggcg cttggagctt
     4921 gtcccccgtc atccgaaagc cgaccacccg agcgcccttt tcgcatgcga tctctgtggc
     4981 gacttcaggc gaaatgaagc tgatggctcc gccggtgtcg aattggaaca gacgctcctt
     5041 gccggccact tcgacccgca ctgcgaccga gcgacggaat tgctccatct tcagtacggt
     5101 tggctcggcg gccgcctgtg ctccggtcga aaggaccgcg gcgcaaatgg ccgcaatccg
     5161 caacgcaact ggtcccattc aacaccccct tttttctgtt tcggaagcgt ccctatgcct
     5221 ctccgctgtc gcgatcatga acgaccccgt gcccctcggc gagatagcct gcgcttcgca
     5281 tctcctcgag ccggctgacc gtgcgctgga attcgaagct tccgtcgcct ttcggaaata
     5341 gtgcggcggg atccgcatca gcgctcgcga gcaacttcac ccgatgctcg taaagagcat
     5401 cgaccagcgt cacgaagcgc gacgcctcgt ttcgcatctc tggccccatc accgggattc
     5461 caacgatgat gaccgtgtgg aagcgctggg cgatggcgag ataatcggcg gctccgcgag
     5521 gctggccgca caggcgcttg aacgagaaga ccgcgactcc cttcaggctc ttgggcacat
     5581 gcaggctccg ccctcctccg acttcgagct cctcgctcgg caccttgtcg cgatcctcga
     5641 ccgagtaatc ggtgagctgg aaaaaggctt tggacaaagc ctgggtggct tggggtccgt
     5701 tgggcacgtg ccacacctcg accccggcca gacgatcgag ccgataatcc gtaggaccgt
     5761 tgacctcgac gacttcgaaa ctggtctcga tcttcgcgat gaacggcaga aacagctcgc
     5821 ggttgagccc gtccttgtag aggtcgctgg gaggcctgtt ggacgtcgcg attatgcgca
     5881 cctcgcgctc gagcaatttc tcgaacagcc gcgacaggat catcgcgtcg gcgggattcg
     5941 tcacttgcat ctcgtcgaag gcgagcagct tcgccccttc ggctatcgcg tcggcaactg
     6001 cttcgagggg atcgcgctcg tcgcgcttgc gtgccgattt cagccgatca tgggtttgaa
     6061 tcatgaaggc gtggaagtgc acccgccgct tcggctcgac gccgatgtgg gcaaaggcga
     6121 ggtccatcag catcgacttg ccgcgcccga ctccgcccca cagatagacc ccgtccgggc
     6181 ctctactgcg cttgccgaac aagccgagta gcccgcggcc gctattgccg agcgcctgcg
     6241 ccagtcgatc cagcgcgacc accgcgcgct gctgcgccgg gtcgggcttg agttcgccgt
     6301 cgctgagaag ccgcgaataa gcgcggccca ccggccccgt catgccggcg cgtttcgatc
     6361 ccgaatccgc ttcagcgtcc cggtgaagct gtagcagggc tcgtcgccct gcctgacgac
     6421 gccctgaagg aacacatggc cgcgagtctg tttcacgagc tcgacatggg cgtcgagcgg
     6481 gattccggcg cggccgcgag caagaaaatg ggtggtcatg tcgagcgtga cataatgccc
     6541 ctgagccatt ccggcgcagc ggccgccggc aaacatcgcc atgtcgatga agctcatcac
     6601 cgcgccgccg tgaatcgacc cgcccatgtt catgtgcgcc tcggtcgggg tcatccggca
     6661 cacacccctg cccgcgccat gaggcctgaa cagcagccta ccggtcgccg ccgcgaatga
     6721 gcttggtggg aaatcgcccc agctgtacca gccgggattg tccggatcct ccttggcacc
     6781 ggtgggcagg ccgacgtctt cgagccctgc cccgctaccg ggcgtttgcg tcaagcggcc
     6841 cgtcctttga agtggtcgat acccgtcaag cggctctctc cgcgatcagc ttcttggtct
     6901 cggcgatggc cttcgccggt gaaagtccct tcgggcacac gttggcgcag ttcatgatcg
     6961 tatggcagcg gtaaagccgg tacgggtcct cgagctcatt caaccgctcg ccggtcgcct
     7021 cgtcgcggct gtcgacgatg aagcgatagg cctgcagcag cacagcgggg ccgaggaact
     7081 tgtcggcgtt ccaccaatag gacgggcagc tggtcgtgca gcagaagcac aggatgcact
     7141 cgtagagccc gtcgagcttg gcgcggtctt ccggcgactg cagccgctcc ttgcccgagg
     7201 gcgccgaggt gacggtctta agccagggct ggaccgacgc atattgcgcg taggcgtggc
     7261 taaggtcggg gacgaggtcc ttgacgacct ccatgtgcgg cagtggcgtg atctgcactt
     7321 cgcccttcag gtccgcgatc ggggtcgtgc aggcaagccc gttgcgcccc tccatgttca
     7381 tcgcgcacga accgcatatg ccctcgcggc acgagcggcg gaacgtcaga gtcggatcga
     7441 tctcgttctt gatcttgatg agcgcgtcga gaaccatcgg accacacttg tcgagatcga
     7501 tcgtgtagcg gtcccagcgc ggattggcgc tgttgtccgg gtcgtagcga tagactttga
     7561 acgtcctcag cgtcttaccg gtttccggct tgtaggtccg gcccctggtg atcttgctgt
     7621 tccgcggaag cgtgaactcg gccaacgcgc atgctccttt tgagtatgag cggcgctatc
     7681 acgccgccgc ggacctttca aacgatcgca tgcttcttga ctgcgcctag cacctcctcg
     7741 gcatggccgg ggactttcac cttgcgccat tccttcacga ccctgccgtc ggcgccgatg
     7801 agaaaggtcg agcgctccat gcccatatat ttgcggccgt acatcgactt ctgcacccac
     7861 gtcccgaagg cgtcggaaat gcgtccgtcc tcgtcggaag cgagcgggac cttgagatcg
     7921 tacttgccga tgaacttctc gtggcgtttc atcgggtcgc gcgaaacgcc cacgatctcc
     7981 gctccggcct tgccgaagtc cgctgccagc gcggtgaagt cctgcgcttc gcgagtgcag
     8041 cctgacgtat cgtccttcgg atagaaatag agcacaagcg gcttgccggg acgggacagg
     8101 ttgatcgttc gcccggcgct cgtctccacg tcaaggtcgg gcgcgcggtc gccttcgcca
     8161 atcatgtcag cttcccttct ttcactctgt tccacagttc cgaaatgctg tgccgcgcct
     8221 cgtcgtggcg agcaagaagc ccggcccaac attcggcgcc gcacgccctc gccatcaact
     8281 ccaagctttc gtcgctcggg cttgtggttt cgggcgccac caatcggatt gttacaagca
     8341 tcttcgtcag caacgtttgt gcttcaacaa cattttgctc gatgaaacca tcttttgcga
     8401 gcatctcgac agctcgctcc agccgcgggt cgaacccgca cttgtgcgcg agctgcaaga
     8461 cgtggaccga aaattcgagg tcgactagcc cgccttcgcc gagcttgacg tcgagcgggc
     8521 ccgagggcgg cttgtggcgg gcaatgtcct cgcgcatttt gaccgcgtct gcgaccagct
     8581 tcgcaggctc gtggggctgg ccgagaatgt cggcgagcaa gtgcgacgcc tgcgcccgcg
     8641 ccgcttccga cccgaagacc ggccgtgcgc gggtgagcgc catatgctcc caggtccacg
     8701 cccgttcgcg ctgatagtcg gcgaagcctt cgagcgagac cgaaagcatc ccttgcgaac
     8761 cttgcgggcg aagccgcgta tcgacgtcgt aaagcgggcc cgccgcggtc ggcacgctga
     8821 gcgctgctgt gacccggttc gagagtcgat tgaaataatc cgccggtccg agcggcttgg
     8881 cgccgtccga agcctccgaa tccggcgttg tgaatagata gacgatgtcg aggtcggaag
     8941 cgtttgtcag cacctcgccc ccgagccttc ccagccccag gaccacgagc tcggcgcctg
     9001 ggaacttccc gtgcgcctcc tcgaattcgg cgacggctgc gctggcgagc gccacgagcg
     9061 ccccctccgc aacgcgcgca tagcccttgc cgacggtcag cgggtcttcg cgcatgtcga
     9121 tcagctgtac cccgagcgcg aagcggcgct cgttgatgat ccttcgagcg cggtcgagac
     9181 cgacatcgta cggctgtccg cgcatctcgg tttcgagata ggcagcgaac tcccgcgccg
     9241 gcggaggcgg gtcgaagcat gaggaatcga gcaaggtgtc gagcaattgc ggacggcgcg
     9301 cgagctggtc cgaaagggcc ggggcatggg cgaggattcg cgcgaccagg gttgtcaact
     9361 tcggccgagc ctcgagcaga cggtacaggt tgaccccgct cggcacccgc tcaacgacgt
     9421 cgctcagcct gttgagggcg cgcatcgggt ccgggctctt tccgatcgcc tcgagaagcg
     9481 ccgggagcat gccttcgaag gcgcgcgttg ccgccgccga ccgaagcgag cgcggccggc
     9541 cggaccgcca ctcgccaact cgccggacgg cggcatcggg atcgggaatg ccgagccgct
     9601 ccacggccga acggagcgca tcgacattcg ccggaaggcg ttcggcgcta ccctccgcaa
     9661 gcacgtcgaa ggcggccccg acggcctcga ccggcgcccg aagccactcg agcaggtcgg
     9721 agccgtcatc gaagccgtgg agctgcgcga cattggccag cgctgcctcg ccttgcggaa
     9781 gaaggtgggt ctgtcggtcg tcgaccatct gcacccggtg ctcggcggtt cgtagccgcc
     9841 ggtaggcatc cgacagcatg gctgcggcat cggagtcgaa aaaaccggcc tcccgaagcg
     9901 cctcgatggc gggcagagtc gcgccgatcc gaagctccgg atcacgtccc ccgtgcacca
     9961 gctgctgggc gtggacatag aattcgacct cgcgaattcc gccgcgtccg cgcttcagat
    10021 cgaacccggg accgaacctc tggcgctccg aataatggtc gcggatccgt tcgccgatgg
    10081 tgcgcacttc ctcgatcgcc ccgaagtcga gcgcccgacg ccatatgaac ggcgtgattg
    10141 catcgaggaa tgcctcgccg aggcggcggt cgccggcgca gcagcgggcg cggatgaagg
    10201 cggctcgctc ccagccgacc gcggaagatt cataatagga caccgccgcg ttgaccggca
    10261 gcacgatcgg ggtcgcctcc ggcgatggcc ggagcctcag gtcgacccgc tccacgaagc
    10321 cgtcctcggt gcgcttctgg agcaattcga ccactcggcg cccgatccgc accgccgagt
    10381 cacctgcttc atcgcggtcg cggcgcggca gagtctccgg atcgaacagc agcaggaggt
    10441 cgacgtcgga ggagaagttg agctcgcggc tgccgagctt gccgagggcg atcaccgaca
    10501 gcccgcgcgg cggctcgtcg ggatacagct ccgctatcgc cgcttcgatt gcccggtcga
    10561 tcgcgccgtc cgcgaaatcg gacagcagcg ccgtcacctg ctccagcgcc aactcgccgg
    10621 aaagatcgcc cagcgcgacc gccagcgcca gcgcccgccg ccgtttccga agctccgtag
    10681 caacgctgtc accaccggtc tcgagggcct gggccgccgc cgtgctgggg ccctcggcta
    10741 ggaacgtctc tgcgatatcg ggccgcgccg ccatcgcctc gcggaggaac ggcgcatgga
    10801 gcttggcgcg ttcgatggcg tcccgccgcg ctttcggtgc tccgctcgtc acgccgcgtc
    10861 tagtgccgga atcggcggaa taaggaaact tcccgggcaa ttcggtcgtt cacccgcaaa
    10921 gatgaagagt gacaaatcga tggctacggc accgatagac atggatcgcc ggccgataag
    10981 ggtcgacctg ccccccgaac atgcgggggt gatggcagcg cttcgccgtg ccttccaggc
    11041 ggcggccgaa gcgccgtgcg accgcgattt cgccgacctg cttcgaaaac tgaattagcg
    11101 ggcacgcctc acaagtcgcg gctgagctcg tccacgtcgc ccatgatcga ctgcagcgcc
    11161 gacttgtcgg gatcggtctt gtgctgcctg cgcgagggca gcttgccgct cgacagcaag
    11221 gcttcgagcg cgactcggcc gcgggctacc cggctcttga tcgttccgac cgcgcatccg
    11281 cagatttccg cagcttcctc gtaggcaaag ccgcccgctc cgacgaggat cagcgcctcg
    11341 cgctgcggct gcgggaggtg catcagcgcg cgctgcatgt cggcaagctc gatgtgccgg
    11401 tcctggctcg ccggcgcggc gagtatcttg gaggcggtca gctcgtccca ctcgcccttg
    11461 aagcgggcgc gccgcatctg gctgagaaac aggttgcgaa ggatgatgaa agtccaggcg
    11521 cgcatgttcg tgccggcctg gaagcgtttt cgcgccgccc acgccttgag cagcgtctcc
    11581 tgaaccaggt cgtcggcaag gtcacggctt cccgacagcg agcggccgaa ggcgcgcagg
    11641 tgcgggatta ccgctgcaag ctggtccttg aactccggat cggagagcgg gatcggctcg
    11701 ccggatgaat ccgtcgccgg ctcagttttt tcgttggccg ccatcaaccc ccacaaatgt
    11761 cgtgcgcgag ccgccctgcg tagcggctgc tgaacctcac cttaccattt gggttgcgac
    11821 agaacggaaa caagcggtca cccgcccaca aggaacatga tcgcgaagat cagcaccacc
    11881 agcgcaaggc cgatccccag cacgtaacgg gtcatatgcg gagtcgacgc tccgcgcgcc
    11941 tccgtcgtcg tcaaatgctc ggtgggctcg tccttcatcg tttctcgctc aacccggtat
    12001 ttgtgaggcc aacgccgcgc gccgaaacat ggttccccaa gcgcaacgac gaacggaccg
    12061 gaccgcaggt ccgtcgggca tgctgcgact atgcaggcac cgtcgcggcg tcgaagaaca
    12121 gcgcctgggc tatcgcggct ttgaccgtcg atcgctggaa gggcttggtg atgaggaagg
    12181 tcggctcggg gcgggtgccg gtcagcagcc gctcggggaa ggcggtgatg aagatcaccg
    12241 gtaccgagaa ttcggcgagg atgtcgcgga ccgcatcgat gccgctcgaa tcgtcggcga
    12301 gctggatgtc ggcgagcacc aggcccggcg ggttctggcg cgcctgcgcc accgcttcgt
    12361 cgcgggtcac ggcgactccg gtaacgttat ggccgaggtc gcggacgatg gtttcgatat
    12421 ccatggcgat gatcggctcg tcctcgatga tcagcacctc ggtcagtgtc tggcgctcga
    12481 tctcgctcaa tgcctcggcg accagcgaat cgacgtcgtc ggggctggcg ccgatcagat
    12541 agcccgcgtc gtccgacgaa aagccttcga gcgaggtgag aaggagggct tggcgggaca
    12601 gaggcgtgat cttcgacagg cgcgcgtggg cgatgctttc cgcgccggtc gtgttgtcag
    12661 acggctcttc gccctcctcg acattggcgg tcgaccagat cgcgtggaac gtcttgtaga
    12721 gcccgagccg gggatcgacg tcccgcggga actcgtcggg cttggcgaca atcgcctcca
    12781 gggtcgcgcg cacgaaggcg tcgccgtggg tttggctgcc ggtcaatgcg cgggcatagc
    12841 ggcggaggaa tggcagatgg ggcgcaagtt cctgtccaag ggacatgacg tacggatctc
    12901 ctaatcaggg acgtgcctcc ctattgagga gcagtccgct tggttgcaac ccttcgaagg
    12961 acgagcgtca cctaagtgcc gcacttctcc cccgcagtga ttatgggttg gaacaaagca
    13021 tcggccattt ggtttcgccc ggtgtggcgg ggttgccctt gctgatcgtt gacgaggatg
    13081 gagtgccgca gatacggcgg gccgcggcgc tttcatggcg agattcgcag ccgtaaagcg
    13141 gcctccggca caggcgcgtc gtacccgcgc taggggattg acaggttgag tgagaagaaa
    13201 gtgggcgagg caggcggcgc tgaagtgacc ggcaacggca gcgggaccag gccgcccgca
    13261 aaaaagcgca agaagcgcgc gggcgacgtc ggccgtgcgc tgcgctccgt ctatgacgaa
    13321 acgcttcgcg aagatgttcc cgacgatttc ctggaccttc ttggcaagct cagctgagtc
    13381 gcgcgcgccg gagcatatag atgccaaccg ccgcccagcg cttcgcccgc ctctccaccc
    13441 ctgcaaaact gctgctgatc ctgaccgcgg cgctgcttcc gatcggcttt ggcctggggt
    13501 gggtcgccta taccggcatc cgtgaagcca acgcggcgct tcagacccaa tcggccgaaa
    13561 aggcgcagat cgccgcgcgc tcgatcgaaa gcctcatcgc ccgcgatgcg ctcgcgcttc
    13621 ggattgcctc gaacgggcgg attgacggcc cggccccgtg cgaaagggtc cagcggtcgc
    13681 tgacgatcgc tccggcggtc gcacagaagt tccggctcga gtcgcaggac ggaggcgaga
    13741 tgtgcagcgt cggtgacatc ggcgataccg gaatgcttcc gcaagtcgcc ccgggagaca
    13801 tccagcttcg agtgtcgcca ggcgaggatt cgctcgcgct gcgggtggga gtcatcggcg
    13861 ggtcggccac gaccaccata atggcggggg agttgcgggc agcagcgctc ggcagcgacc
    13921 gtgacttgag gagcgccgca atcaacgacg gcgagcgcga gatcgatatc atgaccgccg
    13981 ccgaacggtc cgccgccgga cagaaaccgt cgctgaccca gtggagaatc ggtaacggcc
    14041 agttgctggt cgagatcgag gggctggttc ccaccatcac cacgggggac cggctggtta
    14101 tccttctgcc ggtggtgatg tggttcatcg cggcgctgat gacctggcta atggtgcacc
    14161 ggctcctgat ccagccgctc cggcgcctgc agcgggcagt ttctcgctat gagccaggcg
    14221 aatccgcgct cgagcttcca agcaagctcg gcccggcaac ggaaatccag gaattgcgtg
    14281 atgccttcgc ccgcgccgtc acccgcgtgc aggaatcgga acaggaaatg acggctgcgc
    14341 tcgacgggca gcggcggctg gtccgggagg ttcaccacag ggtcaagaac aacctgcagg
    14401 tcatcgcctc gcttctgaac atccacgggc ggaccgccga gacccccgcc gcaagcgccg
    14461 cctacggctc gatcggtcgc cgggtcggcg cattgtcgat cgtgcaccgc aaccattatg
    14521 cggaaatgga agaaaatcgt ggcatgtcga tgcgtccatt gctctctgaa ctgtcggcgg
    14581 agcttcgcgc aaccgccccg gaatcggccc gcggattcca gatcgacctc gacatcgagc
    14641 cgctccacac cacccaggac gtcgccgtgt cggtcgcttt cctgattacc gaagtcgccg
    14701 agttcgcaat gctccaccgc cccgaccagc cagtcgagat ttcgcttcgg cgaacgagcg
    14761 atctcaccgg gcgcctggcg ctcgcaagcc cggttctgaa ccccgattcc gaagaggagc
    14821 aggaaaaagt gcagttcgag cggattatcg ccggcctggc gaagcagttg cgctcgacgc
    14881 tcgaccggaa gctcgggcgg tacagcgtcg acatgccggt ttttccaccc cgctcttagg
    14941 gcgggcggag gtcgtttcgg ttccgtccga aaaaaattcg catctgccgg aaccggtcgg
    15001 aaacgagggg cgttatgcgg agtggatagt gaccttttgc ccccccgctc tcgctatccg
    15061 tttaaatggg cccggaaccg ccaaccctcc ccccccccgg tggcgcttcc gggccctcac
    15121 tttgtccagc tgagccagaa gacgcgttgc gggccgagcg ccagtgagtc acgcggatgg
    15181 cgacgatcgc gagttcgtac agcgaataga ggggcaccat cagtagcagc atcgacactg
    15241 cgtcgggcgg agtcagcact gccgagaccc cggcgcaggc cacgaccgca tagcggcgat
    15301 acctggtcag atgctcgagc cggatgattc cggcgcgctc gaggatcatc agcaggatcg
    15361 gggtcaggaa ggcgaccccg aagccgaaca ggaagcgcgt gctgaagctc aaataattgc
    15421 cgaccgccgg gagcgcctcc cgctgcacgc ctccgacctc gctctggaaa tggggcccaa
    15481 gaaggaaatg caacgcccac ggcatcgcga cgtaatatgc aaaggccgca ccgccgacga
    15541 agaagaaggg cgtgaggatc aggaatggca ggagcgcccg cttttccttc gcgtaaagcc
    15601 ccggagcgac gaacttccag atctggatcg cgaagaaggg gaagccagcc atcagggccg
    15661 cgaacagggc caccttcacg tcgacgaaaa acgcctcggg aacgtcggtg tagatgacct
    15721 tcccctgccc cgccgcaagc agcggctgga ccaggaagcc gaagatgggc ttggcgaaat
    15781 acattccgac gaagaacagc acca
//
LOCUS       DATAKH010000244         4306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_34845,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000244 DATAKH010000000
VERSION     DATAKH010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4306
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34845"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..121)
                     /locus_tag="VHN55_10490"
     CDS             complement(<1..121)
                     /locus_tag="VHN55_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011241596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEX2804388.1"
                     /translation="MSRIQIVETTGSTNADLLADSSAVEGDWLVALEQTAGRGR"
     gene            complement(118..1554)
                     /gene="nuoN"
                     /locus_tag="VHN55_10495"
     CDS             complement(118..1554)
                     /gene="nuoN"
                     /locus_tag="VHN55_10495"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEX2804389.1"
                     /translation="MDYFAPILPEILLTIGAVALMMVAAFAGRRAAPLVSWLSVALLI
                     GATLALIGAPTHAGPVFGGLISADGFSSFGKAIIFPSAAVAILMAHGWFERGTEHGTE
                     YPVLILFAAVGMAVMVSATNLMTLYVGLELQSLAAYVLASYRRMDDRSAEAGLKYFVL
                     GALASGILLYGISLLYGFTGTMTFAGLSAAFAREGVQSLGLLFGLVFLLAGIAFKVSA
                     VPFHMWTPDVYEGAPTPVTAFFATAPKVAAVLMGVRVCIEGLGPAIDAWRQIVIFAAL
                     ASIFLGAVAAWGQTNIKRLLAYSSINNVGFALIGLAAGGAVGASSVLFYMAVYVVMTL
                     GAFLCVLWMRDSNGEPVEDMASLSGLSQTRPAFAAAFAVFMFSLAGIPPLFGFWAKLV
                     VFNAAVEAGLLALAVAGILGTVVGAYYYLKVVKIMYFDDPAAPYARHRAPVEGLLMLV
                     AALLVSPLGYLLIGPLGSMTDRAAGSLF"
     gene            complement(1554..3086)
                     /locus_tag="VHN55_10500"
     CDS             complement(1554..3086)
                     /locus_tag="VHN55_10500"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017184594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEX2804390.1"
                     /translation="MSGLPVLSILIALPLFAGILCLFVSANAARWIALLTTLAALAIG
                     VWMWAGFVSGGPQWQFTEFVELGGGINWALGIDGIALLLTELTLFLMPICIGASWVAI
                     QRRVPEYMAAFLLMEALMVGVFAAQDLFLFYVFFEGGLIPMYLIIGIWGGAERIKASY
                     KFFLYTLLGSVLMLIAMIYMVSESGTTSIPELMAYDFAPEVQQWLWLAFLASFAVKLP
                     MWPVHTWLPDAHVQAPTAGSVILAGVLLKMGGYGFVRFSLPMFPDASAQFIPLMFALS
                     AVAVIYTSLVALVQRDMKKLIAYSSVAHMGFVTFGLFALNRQGIEGALIVMLSHGLVS
                     GALFLVVGVIYDRMHTREISQYGGLSNNMPGYALLFMLFTMAAVGLPGTSGFVGEFLS
                     LVGTYKMSTWAAIAGTTGIILGAAYMLWLYWRVAFGEARTAEAAAMPDLTAREWWLLA
                     PIAAGVLWMGVYPESFLAPMRNDVGYILQRVEPAAPAGDSQLRSGQPKPEPDSHLLEG
                     GH"
     gene            complement(3083..>4306)
                     /locus_tag="VHN55_10505"
     CDS             complement(3083..>4306)
                     /locus_tag="VHN55_10505"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003051616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEX2804391.1"
                     /translation="FMVCRLSPMFEVAPIALHVVTYIGAATCFVAATIGTAQNDIKRV
                     VAYSTMSQLGYMFFAAGVGAYGAAMFHLFTHAFFKALLFLGAGSVIHAMHHEQDMRFY
                     GGLRKEIPFTFWVMVVGTLAITGVGIFGVGFAGYHSKDAILESAFASGSVPGGIAFFL
                     GAVAALLTSFYSWRLIFLTFYGKPRWAASEHIQHALHGEHEDPSEEHGDSSHDPHAVP
                     AGSGGYHPHESPWTMLLPIGLLALGAAFSGFLFSHSFLESAAFWNGSVAFDEHLAHAM
                     HEVPWWVKYTATFVMLIGLWIAWNNYIRDPKAASGFVAQFPGLHRFIANKWYFDELFD
                     RIFVRPSLWLGRLFWHGGDEGTIDRFGPHGAAYAVGVGNRFTTRLQSGYLYNYAFVML
                     LGLVAAASWALWWAQ"
BASE COUNT          932 a         1368 c         1393 g          613 t
ORIGIN      
        1 ggcggcccct tcccgccgtc tgttccagcg cgacgagcca atccccctcg accgcagagc
       61 tatccgccaa cagatccgcg ttggttgagc cggtggtctc gacgatctgg attcggctca
      121 gaacagcgat cccgccgcgc ggtctgtcat ggagccgagc ggtccgatga gtaagtagcc
      181 gagcggcgag acgagcagcg ccgcaaccag catcagcaac ccctcaaccg gcgctcgatg
      241 gcgcgcgtaa ggcgcagccg gatcgtcgaa atacatgatc ttcacgacct tgaggtagta
      301 gtatgcgccg accacggtgc cgaggattcc tgcaaccgcc agcgccagaa gccccgcctc
      361 caccgcggcg ttgaacacca ccagctttgc ccaaaaaccg aacaagggcg gaattcccgc
      421 aagactgaac atgaacacgg cgaaggccgc cgcgaaggcc ggccgagtct gcgacaggcc
      481 ggacaggctg gccatgtcct cgaccggttc gccattggaa tcgcgcatcc acagcacgca
      541 gaggaaggcg ccgagcgtca tcaccacata gacggccatg tagaagagca ccgatgaggc
      601 accgaccgcg ccgcccgcgg cgaggccgat cagcgcgaag ccgacattgt tgatcgatga
      661 ataagcgagc aggcgcttga tgttcgtctg gccccaggcc gcgactgcgc cgaggaaaat
      721 cgaggcgagc gctgcgaaga tgacgatctg acgccatgcg tcgatcgctg ggccgaggcc
      781 ttcgatgcac acccgcacgc ccatcagcac tgccgcgacc ttgggagcgg tggcgaaaaa
      841 ggcggtgacc ggagtcggcg cgccttcgta gacgtccggg gtccacatgt ggaacgggac
      901 ggcgctcact ttgaaggcga ttcccgccag caagaagacg agcccgaaaa gcaggcccag
      961 cgattgcacg ccttcgcggg cgaaagcggc cgacaatccg gcgaacgtca tcgtccccgt
     1021 gaacccgtag agaagcgaaa tcccgtagag caggatcccg ctcgccagcg ctccgagtac
     1081 gaaatattta agccccgcct cggctgagcg gtcgtccatc cgccggtagg aggcgaggac
     1141 gtaggcggcg aggctctgga gctcgaggcc gacataaagc gtcatcaggt tcgtcgccga
     1201 gaccatcacc gccatcccga ccgcggcgaa caggatcagc accggatatt cggtgccgtg
     1261 ctcggtcccg cgctcgaacc atccgtgcgc catgagaatc gcgactgcgg ccgaggggaa
     1321 gatgatcgcc ttgccgaacg atgagaagcc gtcggccgaa atgaggccgc cgaacaccgg
     1381 tccagcgtgg gtcggagcgc cgatcagcgc aagcgtcgcg ccaataagca gagcgacgga
     1441 gagccagctg accagcggtg cagcgcggcg gcccgcgaag gctgcgacca tcatcagcgc
     1501 aacggcgccg atcgtcagca ggatttcggg aaggatcggg gcgaaatagt ccatcaatgc
     1561 cctccctcca ggaggtgaga gtccggctcc ggcttcggct ggccggatct gagctgcgaa
     1621 tccccggcag gagcagccgg ctccacgcgc tggagaatgt agccgacgtc attgcgcatc
     1681 ggcgcaagga agctttccgg atagacgccc atccacagca cgccggcggc gatcggcgcg
     1741 agcagccacc attcgcgcgc cgtcaggtcc ggcatcgccg ccgcttcggc ggtgcgcgcc
     1801 tcgccgaacg cgacccgcca gtagagccac agcatgtagg cggcgccgag gatgatcccg
     1861 gttgttcctg cgatcgctgc ccaggtggac atcttgtacg tgccgacgag gctcaggaat
     1921 tcaccgacaa atccgctggt tccgggaagg ccaaccgcgg ccatcgtgaa cagcatgaac
     1981 agcaaggcgt agcccggcat gttgttcgac aggccgccat attgggatat ctcgcgggtg
     2041 tgcatccggt cgtagatgac tccgacgacg aggaagagcg cgccggagac gaggccgtgg
     2101 cttaacatca cgatcagcgc gccttcgatc ccctgccggt tgagagcgaa caggccgaaa
     2161 gtgacaaagc ccatgtgcgc gaccgaggaa taagcgatca gcttcttcat gtcgcgctgc
     2221 accagcgcga cgagcgaggt ataaatgacc gcgaccgcgg acagcgcgaa catcagcggg
     2281 atgaactgcg cggacgcgtc cgggaacatc ggaagcgaga aacggacgaa gccgtagccg
     2341 cccatcttaa gcaggactcc ggccaggatg acggagccgg cggtcggcgc ctgcacgtgc
     2401 gcgtcgggca gccaggtgtg gaccggccac attggcaact tgaccgcgaa gctggcgagg
     2461 aaagcgagcc acaaccattg ctgcacttcc ggcgcgaagt cgtacgccat cagctcgggg
     2521 atcgacgtgg tcccgctttc ggagaccatg tagatcatcg cgatcagcat cagcaccgag
     2581 ccgagcaggg tgtagaggaa gaatttgtag ctcgccttga tccgctcggc gccgccccag
     2641 ataccgatga tcaggtacat cgggatcagg ccgccttcga agaagacgta gaaaaggaac
     2701 aggtcctgcg ccgcgaagac gccgaccatt agcgcctcca tcagcaggaa cgcggccata
     2761 tattcgggca cccgccgctg gatggcgacc cagcttgcgc cgatgcagat cggcataagg
     2821 aacagggtca gctcggtgag gagaagcgcg atcccgtcga tcccgagcgc ccaatttatg
     2881 ccgccgccga gctcgacgaa ctccgtgaac tgccactgcg gcccgccact cacgaagccg
     2941 gcccacatcc agactccgat ggcgagagcc gccagggtcg taagcagcgc aatccagcgc
     3001 gcggcattcg cgctgacgaa caggcagagg atgccagcga acagcggcag cgcgatcagg
     3061 atggacagca ctggcaagcc gctcattgcg cccaccacag cgcccagctg gcggccgcga
     3121 cgaggccgag cagcatcacg aacgcgtagt tgtagaggta gccggactgg agccgagtgg
     3181 tgaaacggtt gcctacgccc accgcataag cggcgccgtg cgggccgaag cggtcgatcg
     3241 tgccttcatc gccgccatgc cagaacagcc gtccgagcca aagcgacggg cggacgaaga
     3301 tccgatcgaa cagctcgtcg aaataccatt tgttggcgat gaaccggtgc aggcccggga
     3361 actgggcgac gaagccggag gcggcctttg gatcgcggat gtaattgttc caggcgatcc
     3421 acagcccgat cagcatcacg aaggtggcgg tatatttcac ccaccacggc acctcgtgca
     3481 tcgcgtgcgc gagatgctcg tcgaacgcga cgcttccgtt ccagaaggcg gccgactcca
     3541 ggaaggaatg ggagaaaagg aagccggaga aggcggctcc gagcgccagc aggccgatcg
     3601 gcaacagcat cgtccacggg ctttcgtgcg gatggtaccc gccacttccg gccgggactg
     3661 cgtgcgggtc gtgcgagctg tcgccgtgct cctccgatgg atcttcgtgc tcgccgtgga
     3721 gagcgtgctg aatatgctcc gacgctgccc agcgcggctt tccgtagaag gtcaggaaga
     3781 tcagccgcca cgaatagaag ctggtcagca gcgccgcgac ggcgccgagg aagaaggcga
     3841 ttccgcctgg aacgctgccg cttgcgaacg cgctctcgag gatcgcgtcc ttggaatgat
     3901 agccggcgaa gccgaccccg aagatgccga cccccgtgat tgcaagcgtc ccgaccacca
     3961 tcacccagaa agtgaagggg atttccttcc tgaggccacc gtagaagcgc atgtcctgct
     4021 cgtgatgcat cgcgtggatg accgagcccg cgccaaggaa cagcaaggcc ttgaagaaag
     4081 cgtgcgtgaa caagtggaac atcgccgcgc cataggcccc gacaccggct gcgaagaaca
     4141 tgtagccgag ctgcgacatg gtcgaataag cgactacgcg cttgatgtcg ttctgcgccg
     4201 tgccgatcgt cgcggcgacg aagcaggtcg cggcgccaat ataagtgacg acgtgcagcg
     4261 cgatgggcgc gacttcgaac atcggcgaca ggcggcagac catgaa
//
LOCUS       DATAKH010000245         1976 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_31254,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000245 DATAKH010000000
VERSION     DATAKH010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31254"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1109)
                     /locus_tag="VHN55_10510"
     CDS             complement(<1..1109)
                     /locus_tag="VHN55_10510"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX2804392.1"
                     /translation="MRIHFCLLASASALVPAAALAQETPPSDPAVVPPPAATPVATAE
                     GQKRIYTPADFARFAPKTAYDMLVQVPGFSIRSADQERGLGQASENVLINGQRIANKS
                     YGGGAGGATEELQRTPISKVARIEIVDAASLGIAGLSGQVANIILTETKKATGQFEWR
                     PDFRAHFAKPRLFAGNISYSGKSGPVDYTLSVTNNTGRGGFGGPIILTDKDGNLIETR
                     DEIYHSESDLVTFQTKFGIDGPGSSIGNLTLAYTPYWAPTHIRDDRTFATGETRHRST
                     ITKLDGWYYDVNADYEFALGPGRLKLIGLRHFDHEPVITTQILHFDVDDHDEGVRFSR
                     DSRIAETIGRGEYHWKSGKNDWQVTFERAFNSLDQ"
     gene            complement(1225..>1976)
                     /locus_tag="VHN55_10515"
     CDS             complement(1225..>1976)
                     /locus_tag="VHN55_10515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804393.1"
                     /translation="ASLQASGNHPIAFALVREAGRVECTGAGGAALATGTCVFTANPA
                     FSDFLVSQGIKRPDRDEAYVLTMVGATRSLVQSIAAAQYPRPSLDDLTALAALNVTPQ
                     YINELAGRGYKPKSLDELVQFKALNITPAYIDAMSRSGFANMSAEKIVEFKAVGVTPE
                     YVSAMARSGYSRLGAEDIVQLKALDVTPEFIAGFERLGYRGLSADMLAQLKALDVTPE
                     YVASLQRAGISRPSAQKLVQLRAIGFEPNRR"
BASE COUNT          355 a          583 c          640 g          398 t
ORIGIN      
        1 ttctggtcga gcgagttgaa cgcgcgttcg aaggtgacct gccagtcgtt cttgccgctt
       61 ttccagtgat attcgccgcg gccgatcgtt tcagcgattc gcgaatcgcg cgagaagcgg
      121 actccctcat cgtgatcatc cacgtcgaaa tgcaggatct gcgtcgtgat gaccggctcg
      181 tgatcgaagt gacgcaagcc gatgagcttc agccgcccgg gaccgagcgc gaattcatag
      241 tcggcgttga catcatagta ccagccgtcg agcttcgtga tggtgcttcg gtggcgagtt
      301 tcgcccgtcg cgaacgtgcg gtcatcgcgg atgtgggtcg gagcccaata aggcgtgtag
      361 gccagcgtca aatttccgat cgacgatccc ggcccgtcga ttccgaactt cgtttggaac
      421 gtcacgagat cgctttccga gtgatagatc tcgtcacgag tctcgatcag gttcccatcc
      481 ttgtcggtga ggatgatagg gccgccgaag ccgccgcgtc ctgtgttgtt ggtgacggac
      541 aaagtataat cgaccgggcc gctcttgccg gaatagctga tattgccggc gaagagccga
      601 ggcttcgcaa aatgggcgcg gaagtcgggc cgccattcga actggccggt ggctttcttg
      661 gtctcggtca ggatgatatt cgcgacctgc ccggaaaggc ctgcgatgcc gaggctcgcc
      721 gcgtcgacga tctcgatcct tgcgaccttg cttatcggtg tgcgctgaag ttcctcggtc
      781 gcgccgcccg ctccaccgcc gtaggacttg ttggcgatcc gctggccgtt gatcagcaca
      841 ttctctgacg cctggccgag gccgcgctcc tggtcggcac tccgaattga aaagcccgga
      901 acctggacga gcatgtcgta ggcggtcttt ggcgcaaagc gggcgaagtc cgccggcgta
      961 tagatccgct tctggccttc cgcggttgct accggagtcg ctgcaggcgg cggcacaacg
     1021 gccgggtcgg acggcggagt ttcctgcgcc agcgctgctg cgggaacgag tgccgacgcc
     1081 gacgccagca ggcagaaatg gatacgcatt ggaactaccc ctttttcaaa tgtcccgtcg
     1141 gctgttttgg tggccgaagc gagggtgatt tcgaccggtg ggcggcaggc gccgccgtat
     1201 cggcaaacgg tcgcgtggag ccgatcagcg gcggttcggc tcgaagccga tagcgcgcag
     1261 ctggaccagc ttctgcgcac tcggacggga tatcccggcg cgctgaaggc tggcgacata
     1321 ttcgggagtc acatcaagtg ccttcaactg cgccagcatg tccgccgaaa ggccgcgata
     1381 accgaggcgc tcgaagccgg cgatgaactc cggagtgacg tcgagtgcct tcagctggac
     1441 gatgtcttcg gcgccgagcc tggaataacc gcttcgagcc atcgccgaca catattccgg
     1501 cgttaccccg accgccttga attcgacgat cttctctgcg ctcatgttgg cgaagccgct
     1561 gcgcgacatc gcgtcgatat aggcgggcgt gatgttgagc gccttgaatt gaaccagttc
     1621 gtcgagcgac ttcggtttgt accctcggcc ggcaagctcg ttgatgtact gaggagtcac
     1681 gttgagagcg gcgagggcgg tcagatcgtc cagcgagggc cgtggatatt gggcggctgc
     1741 gatcgattgg acgagcgacc gggtcgcccc gaccatggtc agcacataag cttcgtcccg
     1801 gtcgggccgc ttgatcccct gactcacaag gaaatccgaa aaagccgggt tggcggtgaa
     1861 gacgcaggtc ccggttgcaa gcgcagcgcc tcccgcgccg gtgcactcga cacgtccggc
     1921 ttcccgaaca agggcaaagg cgattggatg atttccggat gcctggagac tcgcca
//
LOCUS       DATAKH010000246         4305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35012,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000246 DATAKH010000000
VERSION     DATAKH010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 4305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4305
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35012"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..1156)
                     /locus_tag="VHN55_10520"
     CDS             complement(155..1156)
                     /locus_tag="VHN55_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010161023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HEX2804394.1"
                     /translation="MRFFSDNAAAAHPKVIEAIERSNRLDTAYDGDEWSRKLDGAFSD
                     LFETEVRALWVTTGTAANCLALAALCPPHGAIVCHREAHIENDEAGAPGFFTGGAKLM
                     LVDGPGAKVAPEAVAAACDRVRPDVHQVQPKALSITNATEYGLSYGAGEVAALGELAK
                     QRGLGFHMDGARFANALVTRGGSPADLTWRAGVDALSFGFVKNGGLNAEALVLFRTEL
                     ADEIAVRRKRAGHLLSKGRMLAAQILAMLEDDLWLDNARSANSAARRLAEAAPGRLVY
                     PVEANEIFLRATADEAASLRSLGFDFYDWAPGEIRLVTSWDQQGEPVEKLAAAIAGL"
     gene            complement(1259..2047)
                     /locus_tag="VHN55_10525"
     CDS             complement(1259..2047)
                     /locus_tag="VHN55_10525"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2804395.1"
                     /translation="METLIRRAICAALAVALVPAFPAAAEPPSQPSAPTLASASTSTF
                     ITRSAQAPRSVLIDAASATLYMVEYGQIVDSMKVIVGKPTAATPELTTALTYATLNPY
                     WHVPADIARTLTAPNVLQQGTKYLEERGYEVVSSFGPEAEVLDPSSIDWQAVADGRET
                     VLVRQRPGPANSMGRMKFSLLNSDGIYLHDTPKKELFEQDDRSLSAGCVRLEDAPRFA
                     RWLVGDDATLATAVPERHVALPRMVPITITYLDPQAQTQLAELR"
     gene            complement(2137..2227)
                     /locus_tag="VHN55_10530"
     tRNA            complement(2137..2227)
                     /locus_tag="VHN55_10530"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2191..2193),aa:Ser,seq:gga)
     gene            2315..2713
                     /locus_tag="VHN55_10535"
     CDS             2315..2713
                     /locus_tag="VHN55_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010408704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HEX2804396.1"
                     /translation="MRRFGAPPSAEEIEAIARATLERLPAPFSESLGDVVLLVQDFAD
                     DATLKAMGIAEPFELSGLYEGIPLTERSVEQSGTMPERIFLYRRPILDEWAEGDETLE
                     HLVAHVLIHEVGHHFGLSDDDIHALEDQVE"
     gene            2710..3261
                     /gene="ccmA"
                     /locus_tag="VHN55_10540"
     CDS             2710..3261
                     /gene="ccmA"
                     /locus_tag="VHN55_10540"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEX2804397.1"
                     /translation="MTALLRFDSVACRRGGRLLFEDVDLELEAGDALLVTGPNGSGKS
                     SLIRLAAGLLRPERGRVASTPLALADDSLALDRELPLAKALRFWGGDVDSAMAALGLF
                     DLEHVPVRLLSAGQARRASLARVVASGAPLWLLDEPANTLDSASVQRLAAMIERHRET
                     GGAVLAASHMTLPGDWRSLELGR"
     gene            3258..3896
                     /locus_tag="VHN55_10545"
     CDS             3258..3896
                     /locus_tag="VHN55_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019833989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEX2804398.1"
                     /translation="MIGRLVAREIRRGLGGPAWLPIAFFLLVGTLVPFAVGPDAELLN
                     RIGAGILWIAALTAALLPVERLVEPDRADGILDQLALHGIAEETVAAAKIAGHWLTFG
                     PLLLVAAVPASVLLAMDGAALVRTEIALAIGTLGLAALAVAVAAVTAGLPRASALASL
                     LLLPIAIPLLIFGAAATGAEPSRALLLEAAVALLLLAGSPFVAGAAIRAGRT"
     gene            complement(3893..>4305)
                     /locus_tag="VHN55_10550"
     CDS             complement(3893..>4305)
                     /locus_tag="VHN55_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003050237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEX2804399.1"
                     /translation="EGKDNAVLSGFADRPIRWLVDDAAKFTAREVRRGRRYDGILLDP
                     PKFGRGPTGEVWRLEENLAPLLADCRKLLDGDSGFLVLTVYAVRMSALAIGELVNQTL
                     GDLGGTVEMGEMAVREESRGLLLPTAIFARWSRD"
BASE COUNT          675 a         1456 c         1424 g          750 t
ORIGIN      
        1 gccattgcgg aggccgcgat gacgaagcgg taggcgaccg accattgcgg cgcgaccatc
       61 ccgagctggt cgacgatgac gatccaggtg gagccccaga tcgaggtgaa gacgatgaac
      121 gggacgacga ccgaaaggtc gagcctccgg aggctcatag gccggcgatg gcggcggcga
      181 gcttttcgac cggctccccc tgctggtccc agctggtgac gagccggatt tctcccggcg
      241 cccaatcgta gaagtcgaag ccgagcgagc gcagagacgc cgcctcatcg gctgtggcgc
      301 ggaggaagat ttcgttggct tcgacgggat agacgagccg cccgggcgcg gcctctgcaa
      361 gcctccgcgc cgccgaattc gccgagcggg cattgtccag ccaaaggtca tcctcgagca
      421 tcgccaggat ctgcgccgcc agcattctcc ccttcgacag caaatgaccg gcccgcttgc
      481 gcctaaccgc aatctcgtcg gccagctcgg tcctgaacag gaccagcgcc tcggcgttga
      541 gcccgccgtt cttgacgaag ccgaacgaca gcgcgtcgac gccagcccgc caagttaggt
      601 cggcggggct gccgcccctg gtgaccagcg cattggcgaa acgcgccccg tccatgtgga
      661 agccgagccc gcgctgcttt gccagctcgc ccagtgccgc gacttcgcca gcaccatagg
      721 agaggccata ttcggtggcg ttggtgatcg acaacgcttt gggctgcacc tggtgaacgt
      781 cgggacgcac gcgatcgcag gctgccgcga cagcttccgg cgccaccttc gcgcctggac
      841 cgtcgacgag catcagcttg gcgccgccgg tgaaaaagcc cggtgccccc gcctcgtcat
      901 tctcgatatg ggcttcgcgg tggcagacga tggcgccgtg cggagggcag agtgccgcca
      961 gagcgaggca attggcagcg gtcccagtgg tcacccacag cgccctcacc tcggtttcga
     1021 acaggtccga gaatgcgccg tcgagcttcc ggctccactc gtcgccgtca taagcggtgt
     1081 cgagccggtt ggatcgctcg atcgcttcga tcaccttcgg gtgcgcggcc gccgcattgt
     1141 cggaaaagaa gcgcattcac gcccccaagc tcatcgccgc ggcgctggca aggcccgcgt
     1201 ttcatcgcat gctgagtttc cgttgggcgc tgccctggcc caagccctaa tccgcgtgtc
     1261 agcggagctc cgccagttgc gtctgcgcct gcggatcgag ataggttatg gtgatcggaa
     1321 ccatccgcgg gagcgcgaca tgacgctcgg ggacggcggt cgccagggtc gcgtcgtcgc
     1381 cgaccagcca gcgcgcgaag cgcggcgcgt cctccaaccg cacgcagccg gcactgaggc
     1441 tgcggtcatc ctgctcgaac agctccttct tcggcgtgtc gtgaaggtag atgccatcgc
     1501 tgttcaacag gctgaacttc atccgcccca tcgagttggc ggggccaggc cgctggcgaa
     1561 ccaggaccgt ctcgcgaccg tcggcaaccg cctgccagtc gatgctcgag gggtcgagga
     1621 cctcggcttc cggcccgaag ctcgaaacca cttcatatcc gcgctcttcg aggtatttcg
     1681 tcccctgttg cagcacgttg ggtgcggtta aggtgcgcgc gatatccgcg gggacgtgcc
     1741 agtaagggtt tagcgtcgca taggtgagcg ccgtcgtgag ctccggagtc gcagcagtcg
     1801 gcttgccgac gatcaccttc atcgagtcga cgatctgccc atattcgacc atgtaaagcg
     1861 tggccgaggc ggcatcgatc agcacggatc gcggggcttg cgccgacctg gtgatgaacg
     1921 tcgaagtcga cgctgacgca agcgttggag cgcttggctg gctgggcggt tcggctgccg
     1981 ccgggaaggc aggaacgagc gcgaccgcaa gcgccgcgca gatcgcgcgc cgtatgaggg
     2041 tttccacttt aaatctcttt caaaataacg gtttgactgt tcaacgctca ggcgagcgga
     2101 cagttcagtt tcggctcgac cgcggcgaac agcagttggc ggagcgggag ggattcgaac
     2161 cctcgatacg gttttgccgt atactcactt tccaggcgag cgccttcgac cactcggcca
     2221 ccgctccgca tacgctggaa agggtgccag atagggtcgc ttgggcaagc gagcaagctt
     2281 gcggtggccg cgcttcagcc actattgccc cgcgatgcgc cggttcggag ccccgccctc
     2341 cgccgaggag atcgaagcga tcgcgcgggc gacgctggag cgcttgcccg cgcccttttc
     2401 cgaaagcctc ggcgacgtcg tcttgctggt ccaggacttc gccgacgacg ccaccttgaa
     2461 ggccatggga attgcagagc cgttcgagct cagcgggctt tacgaaggca tcccgctgac
     2521 cgagcgaagc gtcgagcagt cgggcacgat gccggaaagg atatttctct accgccgccc
     2581 gatcctggac gaatgggccg aaggagacga aactctcgag cacctcgtcg cgcacgttct
     2641 gatccacgag gtcggccacc atttcggcct gtccgacgac gacatccacg cgctcgagga
     2701 ccaggtcgag tgacggcgct gcttcgcttc gattcggtcg cctgcagacg tggcgggcgg
     2761 ttgctgttcg aggacgtcga cctggagctc gaagccggcg acgcgctgct ggtgacgggc
     2821 ccgaacggga gcggcaagtc gagcctgatc cgcctcgctg ccggactgct gcggcccgaa
     2881 cgaggccgtg ttgcgtcgac gccgctggcc cttgccgacg actcgctcgc tctggaccgc
     2941 gagcttccgc tcgcgaaggc gcttcggttc tggggcggcg acgtcgattc cgcaatggcg
     3001 gctctgggac tgtttgacct cgagcacgtc ccagttcggc tgctctcggc cggccaggcg
     3061 agacgcgcgt cgctggcgag ggtcgtcgcg tcgggcgcgc ccctgtggct tctcgacgaa
     3121 ccagcaaaca cgctcgactc cgcctccgtc cagcgtcttg ccgcaatgat cgagcggcac
     3181 cgcgaaactg gcggcgcggt cctcgccgcc tcgcacatga cccttccggg cgactggcgc
     3241 agcctggagc tgggccgatg atcggccggc tcgtcgctcg tgaaatccgc cggggactgg
     3301 gcgggccggc ctggcttccg atcgccttct tcctgcttgt cggcaccctg gtgccgttcg
     3361 cggtcggccc cgatgccgag cttttgaacc ggatcggcgc gggcattctg tggatcgcgg
     3421 cgctgacggc agcgctgctt ccggtcgagc ggctcgtcga gccggaccgc gccgacggaa
     3481 tcctcgacca gcttgcgctt cacggcatcg ccgaagagac ggtcgcggcc gcgaagatcg
     3541 ccggccactg gctcaccttc ggtccgctgc ttctcgttgc cgccgtgccg gcgtcggtgc
     3601 tcctcgccat ggacggcgcg gcattggtgc gcaccgaaat tgccctcgca atcggcactc
     3661 ttggccttgc cgcgctggcc gtggcggtcg cggctgtcac cgccggtctc ccgcgcgcaa
     3721 gtgcattggc gagcctgctc ctcctgccga ttgcgatccc gctcctgatc ttcggggccg
     3781 ccgcgacagg cgccgaaccg tcgcgggcgc tgcttttgga agcggccgtc gcgctcctgc
     3841 tcctcgccgg ctctcccttt gtcgccgggg cggcgatcag ggcggggcga acctagtccc
     3901 tgctccagcg ggcaaagatc gccgtcggga gcagaagccc gcgcgattct tcgcggacgg
     3961 ccatttctcc catttcaact gtcccgccta ggtcgcccag cgtctggttc acgagttcgc
     4021 cgatcgccag cgccgacatt cgcaccgcat aaaccgttag caccaggaag ccgctgtcac
     4081 cgtcgagcag cttgcggcag tcggcgagca gcggcgcgag attttcctcc agccgccaga
     4141 cttcgccggt cggcccgcgg ccgaacttgg gcgggtcgag gaggattccg tcatagcggc
     4201 ggccgcgccg gacttcgcgg gcggtgaact tggccgcatc atcgacgagc caacggatcg
     4261 gccgatcggc gaagccggag agcacagcat tgtcctttcc ctccg
//
LOCUS       DATAKH010000247         9457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35020,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000247 DATAKH010000000
VERSION     DATAKH010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9457
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35020"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..588)
                     /locus_tag="VHN55_10555"
     CDS             complement(<1..588)
                     /locus_tag="VHN55_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011414816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEX2804400.1"
                     /translation="MHIASLMLLGSGELGREFTIAAKRLGCRIIACDRYSNAPAMQMA
                     DACEVFPMLDGAALRAAVDKHRPDVIVPEIEAIDTATLAALESEGWRVVPSARAVQLT
                     MNRDGIRDFAAGELGLVTSKYRFAESRDEAIAAAREVGVPCVVKPVMSSSGKGQTTAA
                     SADEVGAAWDYAVANMRGDRPRVIVEEFVRFDSEIT"
     gene            633..1517
                     /locus_tag="VHN55_10560"
     CDS             633..1517
                     /locus_tag="VHN55_10560"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007713553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX2804401.1"
                     /translation="MRTLILIPLLALAAAAPPKPVTPTSIVEAAPESAWHTIPADDLM
                     VIDLKSGGRVVIQLAPEFAPVHVANIRALARANWWDGAAIYRVQDNYVVQWGRNESED
                     PLPAGVVAKPPAEYSRPIEGLAIQPLGFADPYSPNTGFANGWPIGYDPKTATASLAHC
                     YSYVGVGRDLSPDTGTGGELYAIIGHAPRHLDRNIALVGRVVSGIERMSSLPRGTGNL
                     GFYEQRSQDTPIASVRLASEMPAAQRPSFQYLDTNSATFAEYVRSRANRKDDFFIRPA
                     GGVDLCNAPVPIRRTPPE"
     gene            complement(1527..1778)
                     /locus_tag="VHN55_10565"
     CDS             complement(1527..1778)
                     /locus_tag="VHN55_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804402.1"
                     /translation="MPVTPGQSDTTYQPTRRGYHAVYREHEANHCPGCGRTQWIIGRV
                     SAECAFCATALPLAEASMRSHGRPVIIQHKNAEHHAWAA"
     gene            complement(1902..2204)
                     /locus_tag="VHN55_10570"
     CDS             complement(1902..2204)
                     /locus_tag="VHN55_10570"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX2804403.1"
                     /translation="MKARIAEASDQDDRRSERRLTVELDATMRELGASGVEARVLNIS
                     DRGFMAQTEAHFEVGSRIWLILPGRERANAVVKWTAGDRLGAEFAEPLALDDLPLP"
     gene            2531..3826
                     /locus_tag="VHN55_10575"
     CDS             2531..3826
                     /locus_tag="VHN55_10575"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX2804404.1"
                     /translation="MKFQNRFNAFALFCGAAALPLAAHAQQPASPASATQAPLQQPAA
                     AVAEPAPLPPPMWTVADAQQLLAFIQGVAKEGLDPADYGPNGLAAALQGGDPMALSQA
                     ASERFNRLSSDLALGHVRGKDRIDWTIKDPDLDGGRQDQLLRWALYTHQIAETLNGLA
                     PKHPQYAALKYALQVTPPEEADKIERIRLNMDRWRWLPQDLGERYIIVNVPAYTAALV
                     ERGETISRHYAVAGAIKTPTPQLSVMATGVILNPWWEIPQSIAGEVAGKKGYVAVKGA
                     DGKVQRWRQPPGPSNALGKIKFVMPNSKAIYLHDTNAKSRFNSRVRAFSHGCIRTKDI
                     DQLASIMLSQGETDWTPEKVQEVIASGKTVEAKFAEPVPVYIVYMSSAATVEGKIVDY
                     ADVYKRDGKVIAALLDARRAAKTKDAENRPKADDKVATR"
     gene            complement(3830..4267)
                     /locus_tag="VHN55_10580"
     CDS             complement(3830..4267)
                     /locus_tag="VHN55_10580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804405.1"
                     /translation="MKKARIAGLVLAAMALAAMTADRPAGFSFDPQPRWAEEPETEAV
                     CEAMIKECAGQFESGSIDAAWAYAELYDADGYLVGLRSTRSTGCKPLDEHMLLGHRHF
                     VTVFSKDGAPDLDSITVETAPGTDRNSVRLVKRGETSVSIGCS"
     gene            complement(4292..4816)
                     /locus_tag="VHN55_10585"
     CDS             complement(4292..4816)
                     /locus_tag="VHN55_10585"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008830978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2804406.1"
                     /translation="MRKLLIGLAVAAIAVPAWSALPLGTKAPDFTTTGALAGKPFKLH
                     LKEQLRNGPVVLYFFPKAFTKGCTLEAHAFSDASAEFRKLGARVIGMSRDDLPTLQKF
                     SVEECRNSFPVATASEATAKAYDVTWAERPELTTRTSYVIAPSGRIVMVHDDLDWSEH
                     VQKTLAAVRALKGK"
     gene            complement(4874..5458)
                     /locus_tag="VHN55_10590"
     CDS             complement(4874..5458)
                     /locus_tag="VHN55_10590"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX2804407.1"
                     /translation="MALQRGFSWTAALAGAAAMLLLLLLAGAAIAFGGLYPVAASKPD
                     PAGIGPILHETMERGIKRSARGLVGPRLSAADVLEGGSHFKGMCQQCHGGPGAERDEF
                     AAGMNPRPPDLAKTQGEWTREEIFWIAKHGIKMSGMPAFGNGAPDDELWKVAAFVKQL
                     PKVSASRYASLPNAHAQEGTGEEAGHSHSHSHSH"
     gene            5512..6021
                     /locus_tag="VHN55_10595"
     CDS             5512..6021
                     /locus_tag="VHN55_10595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804408.1"
                     /translation="MQKLLRKFHCLAPALLLAGCGVSTAPAPERDKSATADPVPAPGE
                     AAPNSERSKSAEAETPVSACLVQDGERIAEMGIHAIGTEPFWAADVKGRCVTYSHPEN
                     QAGTRVWTRFSGSAEAGSWTGALDGQKFVMVTRPEPGCSDGMSDKRYPIAVTLTVRGE
                     ERVGCAEPR"
     gene            complement(6028..6213)
                     /locus_tag="VHN55_10600"
     CDS             complement(6028..6213)
                     /locus_tag="VHN55_10600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HEX2804409.1"
                     /translation="MNNRFLINRRDAKIMGVAAGISDYTGVDSTIIRLALVAALLLTG
                     PVVVLFYLLAGFLAADR"
     gene            complement(6498..7367)
                     /locus_tag="VHN55_10605"
     CDS             complement(6498..7367)
                     /locus_tag="VHN55_10605"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX2804410.1"
                     /translation="MADDTDVLVPKYDEAKDDLPGSEAKLEPKPDWEPRYAGSERLKD
                     KVALVTGADSGIGRAVAALFAREGADVAIAYLCEDEDAEKAKEIVEAEGRRAILLRGD
                     VGSKEFCEEAVKRTVDELGRLDILVNNAGEQHWDKEITDISEEQLRRTFQTNIFGMFF
                     MTQAAMPHLNEGSAIINCTSVTMYKGSPLLLDYSSTKGAITAFTRSLAKNLAEKGIRV
                     NAVAPGPIWTPLNPFGGQPKEKIPEFGKDTPMGRPGQPNEVAPSFLFLACDDASYMTG
                     QVLHPDGGDSTSS"
     gene            complement(7369..7620)
                     /locus_tag="VHN55_10610"
     CDS             complement(7369..7620)
                     /locus_tag="VHN55_10610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804411.1"
                     /translation="MGPGYFIIAILGCADGSTQCTPLMTVPTRYESQAACAAAAPGAL
                     IANSDFDYPSLFAECRSGAGPASAESEPKLVATGPSRRG"
     gene            7734..>9457
                     /locus_tag="VHN55_10615"
     CDS             7734..>9457
                     /locus_tag="VHN55_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016746194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX2804412.1"
                     /translation="MAEAADRAKGERGSFAPLIRFLPMLWPKGATELKARVIAAVLLV
                     LAGKAAVLVMPFAYKAVIDRMSATGTAAAFSIVAALVLAYAGARFAGVLADNLRNAVF
                     EKVGQDAARRLAGQVFRHIHSLSLRFHLERRTGSLTKIVERGTKSIDMMLYFLLFNIA
                     PTIIELTAICIIFFVKFGPGLVAATLAMVAIYITFTRKVTDWRAKLQREMNEVDNRTI
                     GRAVDSLLNYETVKYFGAEEREARRYDEAVSQFTRATVRNEVSLAWLNIGQSLITNMM
                     MAGAMIFTVWGWSQGRFTPGDVVLVNSLLMQLFRPLDMLGWVYRTIRQGLIDMEAMFT
                     LLDTPPEVVDAPDAGALEVRGGHVRFEDVHFGYEPSREILKGLSFDVPPGSRLAIVGP
                     SGAGKSTIARLLYRFYDPTAGRILIDGHDIAKVTQASLRDFIGIVPQDTVLFNDTIGY
                     NIGYGAEAASQAQVEEAAKGAAIDRFIAALPDGYESMVGERGLKLSGGEKQRVAIART
                     LLKNPPILILDEATSALDSKTEEAILATLERLARNRTTITIAHRLSTVVNSDTILVFD
                     EGEVAESGT"
BASE COUNT         1630 a         3064 c         3103 g         1660 t
ORIGIN      
        1 cgtgatctcg ctgtcgaaac ggacgaattc ctcgacgatc acccgcgggc ggtcgccgcg
       61 catgttggcg accgcataat cccaggcggc gccgacttcg tcggcacttg cggcggtggt
      121 ctggcccttc cccgagctcg acatcaccgg cttgaccacg cacggcacgc ccacctcccg
      181 ggcggccgca atcgcctcgt cgcgactctc cgcgaaccgg tatttcgagg ttacgaggcc
      241 aagctcgccc gcggcgaagt cgcggatccc gtcgcggttc atggtcagct gaaccgccct
      301 tgccgaagga acgacccgcc acccttcgct ttcgagagcg gcaagcgtcg ctgtatcgat
      361 cgcctcgatt tccgggacga tgacgtcggg ccggtgcttg tcgaccgcgg cccgcagagc
      421 cgctccatcg agcatcggga agacttcgca ggcatccgcc atttgcatcg cgggagcgtt
      481 cgaatagcgg tcgcaggcaa tgatccggca gccgagccgc ttcgccgcga ttgtgaattc
      541 gcggcccagc tcgccggagc cgagcagcat caggctggca atatgcatcg cgccgcgcct
      601 atcgtgtcgg cagcaaaaca caaggaacgc atatgcgcac tttgatcctg attcccctgc
      661 tggctctcgc tgctgcggca ccgcccaagc cggtcactcc gacatcgatc gtcgaggcgg
      721 cgccggagag cgcctggcac acgatcccag ccgacgacct gatggtcatc gacctcaaaa
      781 gcggcgggcg ggtcgtgatc cagctggcgc cggaattcgc gccggtgcac gtcgccaaca
      841 tccgggcgct ggcccgggcg aactggtggg acggggcggc aatctatcga gtccaggaca
      901 attatgtcgt tcagtggggc aggaatgaga gcgaggaccc gcttccggcc ggggtcgtcg
      961 ccaagccacc cgccgaatat tcgcggccaa tcgaggggct ggccatccag ccgctgggct
     1021 tcgccgaccc ttattcgccg aacacgggct tcgctaacgg ctggccgatc ggctacgatc
     1081 ccaagacggc caccgccagc ctcgcccatt gctattccta cgtcggagtc ggccgcgacc
     1141 tgtcgccgga cacgggaacc ggcggcgagc tctacgcgat tatcggccac gcgccgcggc
     1201 atctcgaccg caacatcgcg ctcgtcggcc gggtggtcag cggaatcgag aggatgagca
     1261 gcctgccccg cgggacaggc aatctcggct tttacgagca gaggtcgcag gacacgccga
     1321 ttgcgagcgt ccggctggcg agcgaaatgc ccgcggcgca acgcccttcg ttccagtatc
     1381 tggacacgaa cagcgccact tttgccgaat atgtccgctc gcgcgccaac cgcaaggacg
     1441 acttcttcat ccgccccgca ggcggggtcg acctgtgcaa tgcgccggtt ccgatccggc
     1501 gaacgccgcc cgaataagcg gaggcgctag gcagcccagg cgtggtgctc ggcgttcttg
     1561 tgctggatga tcaccgggcg gccgtgcgac cgcatgctcg cctcggcaag cggaagcgct
     1621 gtagcgcaaa aggcgcactc cgccgaaacc cggccgatga tccactgggt tcgcccgcaa
     1681 ccggggcagt gatttgcctc gtgctcgcga tagaccgcgt gataaccgcg gcgggtcggc
     1741 tgataggtcg tgtcgctctg gcctggggtg acaggcattt tggtgttcct ttcgggtcgg
     1801 gtgaacgagc gaaagctgcg gcggttgcat cgccgccccg gtttgggact ttggctaacg
     1861 tcgctgtaac ttgcgaaccg cctgcaattt cagcggtttt cctagggtag cggcaggtcg
     1921 tcgagcgcaa gcggctcggc gaactcggct ccgagccggt cgcccgcagt ccacttgacc
     1981 accgcattgg cgcgctcgcg gccgggcagg atcagccaga tccgcgaacc gacctcgaaa
     2041 tgggcctcgg tctgggccat gaagcctcgg tcggagatgt tcaggacccg cgcctcgacc
     2101 ccgctggcgc cgagctcgcg catcgtagcg tcgagctcga cggtcagccg gcgctcgctt
     2161 cggcgatcgt cctgatcgct ggcttcggcg atccgcgcct tcatctcgga cacttcatct
     2221 ccacccacga caactccaca aggcttcgaa aggacaagct gacgaaagga tccagcgaca
     2281 ggtgctggcc cgaccgcccg ttatcgtccc gccgatgggt gggatcaagg agaagctggt
     2341 ggccggctgg ccgcggacgc agccggcgcc agcccgcgga acggctcgcg atcgcttaaa
     2401 cattggttgt tatccatgaa gttacgggcg aagtgtggct ttcgctcact ggccgcggcc
     2461 gttcagcttg tgtactgagg tgttcgggca aagaaattgg ctcggcttcg agcggaagag
     2521 cgagactgtt gtgaaattcc aaaaccgatt caacgcattc gcactgtttt gcggagcagc
     2581 ggcgctgcct ctggcggcgc atgcccagca accggcctcg ccggcaagcg cgacgcaggc
     2641 gccacttcag cagccggcag cagccgtcgc cgagccggcc ccgctgccgc cgccgatgtg
     2701 gacggtggcc gacgcgcagc agctgctcgc cttcatccaa ggcgtcgcca aggaggggct
     2761 cgatccggcc gattacgggc cgaacggcct cgctgcggcg ctccagggcg gcgacccgat
     2821 ggcgctcagc caggcggcga gcgagcgctt caaccgcctc tcctcggacc tcgcgctcgg
     2881 ccacgtgcgc ggcaaggacc gtatcgactg gacgatcaag gatcccgacc tcgacggcgg
     2941 gcgccaggac cagctgcttc gctgggcgct gtacacgcac cagatcgcag agacgttgaa
     3001 cgggctggcg ccgaagcatc cgcaatatgc ggcgctcaaa tatgcgcttc aggtcactcc
     3061 tccggaggag gccgacaaga tcgagcgaat ccggctcaac atggaccgct ggaggtggct
     3121 tccgcaggac cttggcgagc gctacatcat cgtcaatgtt cccgcctaca cggcggcgct
     3181 cgtcgagagg ggcgagacga tttcgaggca ctatgcggtc gcgggcgcga tcaagactcc
     3241 gaccccgcag ctgtcagtta tggcaaccgg cgtgatcctc aacccatggt gggaaatccc
     3301 gcagagcatc gctggcgagg tcgccggcaa gaagggctat gtcgccgtca agggcgcgga
     3361 cgggaaggtc cagcgctggc gccagccgcc gggaccgtcg aacgcgcttg gcaagatcaa
     3421 gttcgtgatg ccgaactcaa aggcgatcta ccttcacgac accaacgcca agtcgaggtt
     3481 caacagccgg gtacgggcgt tcagccacgg ctgcatccgc accaaggaca tcgaccagct
     3541 ggccagcatc atgctcagcc agggcgagac cgactggacg ccggaaaagg tccaggaggt
     3601 gattgccagc ggcaagacgg tcgaggcgaa gtttgccgag ccggtcccgg tctacatcgt
     3661 ctacatgtcg tcggcggcga ccgtcgaagg caagatcgtc gactatgccg acgtctacaa
     3721 gcgcgacggc aaggtgatcg cggccctcct cgatgcgcgc agggccgcga agaccaagga
     3781 cgccgagaac cggccgaagg cggacgacaa ggtcgcgacc cgctgactct tacgagcagc
     3841 cgatgctcac gctggtttcg ccgcgtttga ctagccgtac cgaattccgg tcggttccag
     3901 gcgccgtttc gacggtgatc gagtcgaggt cgggagcgcc gtccttcgaa aagaccgtca
     3961 cgaaatggcg gtggccgagg agcatgtgct cgtcgagcgg cttgcagccc gtcgacctgg
     4021 tcgagcgcag gccgacaagg tagccgtcgg cgtcatagag ctcggcataa gcccaggctg
     4081 catcgatcga gccgctctcg aactggccgg cgcactcctt gatcatggct tcgcaaacgg
     4141 cctcggtctc tggctcctcg gcccatcgcg gctgcggatc gaagctgaac ccggccggcc
     4201 gatccgcggt cattgccgct agcgccatgg cggcgaggac cagccccgcg attcgcgcct
     4261 ttttcactgc cccctcccct gctctttgaa gctatttgcc tttcagcgcc ctaactgccg
     4321 cgagcgtctt ctggacatgc tcgctccagt cgaggtcatc gtggaccatg acgatccgac
     4381 ccgaaggcgc gatcacgtag gatgtccgcg tggtcagctc cggacgctcg gcccaggtga
     4441 catcgtaggc cttggccgtc gcctcgctcg cggtggcgac cgggaagctg ttgcggcatt
     4501 cctcgaccga gaatttctgc agcgtcggaa ggtcgtcgcg cgacatcccg atcacgcgcg
     4561 ctccgagctt cctgaactcg gcgctggcat cgctgaacgc atgcgcttcg agcgtgcagc
     4621 ccttggtgaa ggccttgggg aagaaataga ggacgacggg tccgttgcgg agttgctcct
     4681 tgaggtgaag cttgaacggc ttgcccgcga gcgcgccggt ggtggtgaaa tcgggcgcct
     4741 tcgtgccgag cggaagcgcc gaccaggcgg ggactgcaat cgctgccacg gccagtccga
     4801 tcagcagctt gcgcatgagt cgctcctttt cgtgagcaag tgctctatcg cacggcgcgg
     4861 caggcttcca gactcaatgg ctgtggctgt ggctgtggct gtgaccggcc tcttcgcccg
     4921 taccctcttg tgcgtgggcg ttgggtaatg acgcatatcg gctcgcgctg accttcggca
     4981 gctgcttcac gaacgcggcg accttccaca gttcatcgtc gggcgcgccg ttgccgaatg
     5041 ccggcattcc gctcatcttg atcccgtgct tggcgatcca gaagatttct tcgcgggtcc
     5101 attctccctg cgttttggcg aggtcgggcg gccgcgggtt cattccggcc gcgaactcgt
     5161 cccgctcggc tccagggccg ccatggcatt gctggcacat gcccttgaaa tgcgacccgc
     5221 cctcgagcac gtcggccgcg ctcagcctcg gcccgaccag gcccctggcg gagcgcttga
     5281 tcccgcgctc catcgtctcg tggaggatcg gtccgatccc ggccggatcc ggcttcgagg
     5341 ctgcgactgg gtagaggccg ccgaaagcga tcgcggcgcc ggccaggagg agaagtagga
     5401 gcatcgccgc cgcaccggcg agcgctgccg tccagctgaa tccgcgttgc agtgccatgg
     5461 ctctctcctc ttcctatgag tcgatcccgc gtcctgcgcg ttcagccatg gatgcagaaa
     5521 ttgttgcgca agttccattg tctcgcgccg gcgctcctgc tggcgggctg cggtgtgtcg
     5581 acggcgcctg cgccagagcg cgacaaatcc gctaccgcgg atccggtacc ggcgcctggg
     5641 gaggccgcgc cgaatagcga gcggtcgaaa agcgccgaag cggaaactcc ggtcagcgcc
     5701 tgcctcgttc aggacggcga gcggatcgcc gagatgggga ttcacgcaat cgggaccgag
     5761 ccgttctggg cggcggacgt gaagggccgc tgcgtcacct attcacaccc ggaaaaccag
     5821 gcgggcacgc gcgtgtggac gcggttttca ggcagcgccg aggccggaag ctggaccggc
     5881 gcgctcgacg ggcagaagtt tgtgatggtt acccggccgg agccgggctg ttcggacgga
     5941 atgtcggaca agcgctaccc gatcgccgtc accctcacgg ttcgcgggga ggagcgcgtc
     6001 ggctgcgctg agccgcgctg aactactcta gcgatcggcc gcgaggaagc cggcgagcag
     6061 gtagaagagg accacgacgg gtccggtgag cagaagcgcg gcgacgagcg ccaggcggat
     6121 gatcgtcgag tcgacccccg tgtaatcgga gatcccggcg gcgacgccca tgatcttggc
     6181 gtcgcgccgg ttgatcagga aacggttgtt cacttgcacc tccggttcag gcgatgagcg
     6241 aggtcgcgga gctgacgaac agcatcgcgg tgacgaaggc ggcggcgagg gcggttgcgg
     6301 tttcgcggcc ggcggaaaaa gttgcgaaca ttggtctggt ccctttttgt cttcggccca
     6361 ccattgggcc acggacatat caatgcaggg accgtgccaa ttgaacttta tctaatgaaa
     6421 tcagtaggcg cgtccgacgg gtcgcgaaga ttggcgggaa ttacgaccgc ctgttgggag
     6481 aaatccccaa gcccggctca actcgaagtg gaatccccgc cgtcggggtg aagcacctgg
     6541 ccagtcatgt agctggcgtc atcgcaggcg aggaagagga acgagggcgc cacctcgttg
     6601 ggctggccgg ggcggcccat cggcgtgtcc ttgccgaact ctggaatctt ttccttcggc
     6661 tggccgccga acggattgag cggagtccag atcggaccgg gggcgaccgc gtttacgcgg
     6721 attcccttct cggcgaggtt tttcgccagg ctccgggtga aagcggtgat cgcacccttg
     6781 gtcgagctgt agtcgagcag cagcggcgat cccttgtaca tggtcaccga cgtgcagttg
     6841 atgatcgccg atccttcatt gaggtgcggc atagccgcct gggtcatgaa gaacatcccg
     6901 aagatattgg tctggaaggt acgacgcagc tgctcctcgg agatgtcggt gatttccttg
     6961 tcccaatgct gctccccggc attgttgacg aggatatcga ggcgcccgag ttcatcgacc
     7021 gtccgcttca ccgcctcttc gcagaactcc ttcgaaccga cgtcgccgcg gagcaggatg
     7081 gcgcgccgac cctcggcttc gacgatctcc tttgccttct cggcatcctc gtcctcgcac
     7141 agataggcga ttgcgacgtc ggcgccttcg cgagcgaaca gcgcggcgac ggcacggccg
     7201 ataccgctgt cagcgccggt gacgagcgcc accttgtcct tcagccgctc ggatcccgca
     7261 tagcgcggct cccagtctgg cttgggctcg agcttcgcct cgcttccggg aaggtcgtcc
     7321 tttgcctcgt catatttggg aacgaggacg tcggtgtcgt cggccatgtc agcctctccg
     7381 cgatggcccc gtcgccacga gcttcggctc actctcggcc gacgcggggc cagcgcccga
     7441 tcggcactcg gcgaacaagc tgggataatc gaaatcgctg ttggcgatca gcgctcccgg
     7501 cgccgcagcg gcgcaggccg cctggctttc gtaccgggtc ggaaccgtca ttagcggcgt
     7561 gcactgggtc gagccgtccg cgcagccaag gatcgcgatg atgaaataac ccggtcccat
     7621 tggccccgcc tcgtttcctg tgaacgattt tataaccgcc gaaaaaacgc gcggttccaa
     7681 tcatttctcc cgcggcgttt gtcgggggcg gtgcgcgtcc ttacctatgc gcaatggcgg
     7741 aagcggcaga tcgggcgaag ggggagcgtg gaagcttcgc gccgctgatt cgattcctgc
     7801 cgatgctttg gcccaagggc gcgaccgagc tgaaggcgcg ggtaatcgcg gcggtcctgc
     7861 tcgtgctcgc cggcaaggcc gcggtgctgg tcatgccgtt tgcatacaag gcggtcatcg
     7921 accgaatgtc cgcgaccgga acagcggcgg ctttttcgat cgttgcggcg ctcgtgctcg
     7981 cttatgcggg ggcccgcttc gccggggtgc tcgccgacaa tcttcgcaac gccgtgttcg
     8041 agaaagtcgg tcaggacgcg gcgcggcggc tcgccggcca ggtgttccgc cacatccatt
     8101 ccctgtcgct gcgcttccat ctcgagcgga ggacgggctc gctgaccaag attgtcgagc
     8161 gcgggaccaa gagcatcgac atgatgctct atttcctgct gttcaacatc gccccgacga
     8221 tcatcgagtt gaccgcgatc tgcatcatct tcttcgtcaa gttcggcccc ggcctggtgg
     8281 cggcgacgct ggcgatggta gcgatctaca tcaccttcac ccgcaaggtg accgactggc
     8341 gcgcgaagct gcagcgggag atgaacgagg tcgacaaccg aacgatcggc cgcgcggtcg
     8401 actcgctgct gaactatgag acggtcaaat atttcggcgc cgaggagcgc gaggcgcgcc
     8461 gctacgacga ggcggtctcg caattcactc gggcgacggt tcgcaacgaa gtgtcgctgg
     8521 cctggctcaa catcggccag tcgctgatca ccaatatgat gatggccggt gcgatgatct
     8581 tcaccgtctg gggctggagc cagggccgct tcacgccggg cgacgtggtg cttgtgaatt
     8641 cgctgctgat gcagctgttc cggccgctcg acatgctggg gtgggtttac cggacaatcc
     8701 gccaggggct gatcgacatg gaggcgatgt tcacgcttct cgacacgccc ccagaggttg
     8761 tcgacgcgcc ggacgcgggg gcgctggagg tccgcggcgg gcatgtccgc ttcgaggacg
     8821 tccatttcgg ctacgagccg tcgcgtgaga tcctgaaagg cctcagcttc gacgttccgc
     8881 cgggaagccg gctggcaatc gtcgggccgt cgggcgcagg aaagtcgacg atcgcccggc
     8941 tgctctaccg cttctacgat ccgaccgcgg gacggatcct gatcgacggc cacgacatcg
     9001 caaaggtgac ccaggcgagc cttcgcgact tcatcggtat cgtcccccag gacacggtcc
     9061 tgttcaacga cacgatcggc tacaacatcg gctatggcgc cgaagccgcg agccaggcgc
     9121 aggtcgagga agcggcgaag ggcgcagcga tcgaccgctt catcgccgct ctccccgacg
     9181 gatatgaatc gatggtcggc gagcgcgggc tcaagctttc cggcggcgag aagcagcgcg
     9241 tcgcgatcgc ccggaccctg ctcaagaacc cgcctatcct catcctcgac gaagcgacga
     9301 gcgcgctcga cagcaagacc gaggaggcaa tcctggcgac cctcgagcgg ctcgctcgca
     9361 accgcacgac gatcaccatc gcacatcggc tgtcgacggt cgtgaactcg gacacgatcc
     9421 tggtgttcga cgaaggcgaa gttgccgaaa gcgggac
//
LOCUS       DATAKH010000248         2371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_31360,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000248 DATAKH010000000
VERSION     DATAKH010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31360"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..1325
                     /gene="cysS"
                     /locus_tag="VHN55_10620"
     CDS             15..1325
                     /gene="cysS"
                     /locus_tag="VHN55_10620"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008601953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX2804413.1"
                     /translation="MIRLYDTMTREKREFEPADPGRITMYVCGPTVYGRAHIGNARPP
                     VVFDTLARLIRHEYGADSLFYARNVTDVDDKIIAAAEQEGVEPSVITERYERHYLDDM
                     GALGVEPPTIAPHATQEIAAMVAMIERLIEGDYAYSAQGHVLFDVTADPAYGILSHRD
                     REGMIAGARVEVAPYKRDPADFVLWKPSDTDVIGWDSPWGRGRPGWHLECSAMIERHL
                     GETIDIHGGGVDLVFPHHENEIAQSRCAHGGAALARYWLHNGFVDMGAEKMSKSLGNV
                     VTPGELLAAGHKGETLRLALLSAHYRQPLPWTQALIEQSKTILDRLYRIAGDAEAGEI
                     DGQVIEALSDDLNTPAAITRLQALDDPATLKASAAILGLLGETSDQWFRGGADDERID
                     ARIAERAEAKKNRDFAAADRIRDELKAEGIVLEDTATGTTWRKE"
     gene            1322..1741
                     /locus_tag="VHN55_10625"
     CDS             1322..1741
                     /locus_tag="VHN55_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein"
                     /protein_id="HEX2804414.1"
                     /translation="MNAPLYTLDVLRLAASLPGPAKLERVDGSASKRSPTCGSTVATQ
                     VQVSGGRVEALSQLVHACAFGQASAAVVALQAPGRSGAEVEAALGQLAAWLSSDRDTP
                     PDWGGYGALAPARNRRSRHGAILLPLRALAAAMQSVK"
     gene            1819..>2371
                     /locus_tag="VHN55_10630"
     CDS             1819..>2371
                     /locus_tag="VHN55_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011950856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX2804415.1"
                     /translation="MLGAALLFVTLFRRLKLGATLGYIVAGALIGPQLLGLIRDPEQL
                     ASVSEIGIALLLFIIGLELRPGRLWRLRNDIFGLGLAQVVLCGLAISLLLHVAVGLSP
                     EASLAIGLPLGLSSTAQVLPMLRSENELNTPQGERAFSVLLFQDLSLVPLITIIAAMA
                     RVPPDPTAPSGWTLALYTVGAIAG"
BASE COUNT          384 a          807 c          802 g          378 t
ORIGIN      
        1 gccgaggaac cgcaatgatc cgactttacg acacgatgac tcgcgaaaag cgcgagttcg
       61 agcctgccga tccgggccga atcacgatgt atgtctgcgg tccgaccgtc tacggccgag
      121 cccatatcgg caatgcccgc ccgccggtcg tgttcgacac gctcgcgcgg ctgatccggc
      181 acgaatatgg cgccgacagc ctcttctatg cgcgcaatgt taccgacgtc gacgacaaga
      241 tcatcgccgc cgccgagcag gaaggcgtgg agccttcggt gatcaccgag cgctatgagc
      301 gccactatct cgacgacatg ggcgcgcttg gggtggagcc gccgaccatc gccccgcacg
      361 cgacccagga aatcgcggcc atggttgcga tgatcgagcg gctgatcgaa ggtgattatg
      421 cctattcggc gcaggggcac gtcctgttcg acgtcaccgc cgacccggcc tacggaatcc
      481 tcagccaccg cgaccgcgaa ggcatgattg caggcgcccg tgtcgaggtc gcgccctaca
      541 agcgcgaccc ggcggatttc gtgctttgga agccgagcga cacggacgtg atcggctggg
      601 attcgccgtg gggccgaggc cgtccgggct ggcacctcga atgttcggcg atgatcgagc
      661 ggcaccttgg cgaaacgatc gacatccatg gcggcggggt cgacctcgtc tttccgcacc
      721 acgagaacga gatcgcgcaa agccgctgcg cgcacggcgg agcggctctg gcccgctatt
      781 ggctgcacaa cggcttcgtc gacatgggcg ccgagaaaat gtcgaagtcg ctcggcaacg
      841 tcgtcactcc gggcgagctg cttgccgccg gccacaaggg cgagacactt cggctcgcgc
      901 ttctgtcggc gcattaccgg cagccgctgc cgtggactca ggcgctgatc gaacagtcga
      961 agacgatcct cgaccggctc taccggatcg caggggacgc ggaggcgggc gagatcgacg
     1021 gtcaggtcat cgaggcgctg tcggacgacc tcaacacccc cgcggcgatc acgcgcctcc
     1081 aggccctgga tgacccggcg accctgaagg cgagcgcggc gatcctcggc ctgctcgggg
     1141 agacctccga ccagtggttc cgaggcggcg ccgacgacga gcggatcgac gctcggatcg
     1201 cggagcgggc ggaggcgaag aagaaccgcg acttcgccgc cgccgaccga atacgcgacg
     1261 agttgaaggc cgaaggaatc gtcttggagg acaccgccac cggcaccaca tggcgcaagg
     1321 aatgaacgca cctctctaca cgctcgacgt ccttcgcctc gcggcctcgc ttcccgggcc
     1381 ggcgaagctg gagcgggtcg acggttccgc gtccaagcgc tcgccgacgt gcgggagcac
     1441 ggtcgcaacg caggtgcagg tcagcggcgg ccgcgtcgag gcgctgtcgc aactggtgca
     1501 cgcatgcgcg ttcggccagg cctcggcggc ggtggtcgcg ctgcaggcgc ccggacgcag
     1561 cggagccgag gtcgaggccg cgctcggcca actggccgcc tggctttcga gcgatcgcga
     1621 cactcccccc gactggggcg gctacggagc gcttgcgccg gcccgcaacc gccgctcccg
     1681 ccacggggcg atcctcctgc cgctgcgcgc gctcgccgca gcgatgcagt cggtaaagtg
     1741 attaacgcgg cggcggccgc cgtgacggcg gtggaagcgg ctgagacgac gggcgccttg
     1801 ctcgaaagca gtgcgatcat gctcggcgcc gcgttgttgt tcgtgactct ctttcgcagg
     1861 ctcaagctcg gcgccactct cgggtacatc gtcgccggcg cgctgatcgg cccgcaattg
     1921 ctcggcctga tccgcgatcc cgagcaactt gcaagcgtca gcgaaatcgg aatcgcgctg
     1981 ttgctgttca tcatcgggct cgaacttcgg cccgggcggc tgtggcggct tcgcaacgac
     2041 atcttcgggc tcgggctggc gcaggtggtc ctttgcgggc tcgcgatcag cctgcttctc
     2101 cacgttgcgg tcggcttgtc gccggaggca tcgctggcga tcggccttcc gcttgggctg
     2161 tcgtccaccg cccaggtgct gccgatgctg cgctcggaaa acgaactcaa cacgccgcag
     2221 ggcgagcggg ccttttcagt gcttctgttc caggacctgt cgctcgtccc gctgatcacg
     2281 atcatcgccg caatggcgcg agtgccgccg gacccgaccg cccccagcgg ctggacgctt
     2341 gcgctctata ctgtcggggc gatcgccggc c
//
LOCUS       DATAKH010000249         6317 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35191,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000249 DATAKH010000000
VERSION     DATAKH010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6317
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35191"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1250
                     /gene="pheS"
                     /locus_tag="VHN55_10635"
     CDS             186..1250
                     /gene="pheS"
                     /locus_tag="VHN55_10635"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016747146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEX2804416.1"
                     /translation="MADLTDQIRAAPDLQALDALRVSALGKSGSITTQLKSLGKMSPD
                     ERAAEAPKIHAFREAVTEAIAARKAELETAELEKRLATERVDLSLPAPEAPQGSVHPV
                     SQVMDELAEIFADLGFSVAEGPEIEEQWYNFTALNMPEFHPARAMQDTFYCRRMDDDP
                     AAEAHVLRTHTSPVQIRAMTSGPPPFRLIAPGRVYRSDSDATHTPMFHQVEGLVIDRA
                     ITMGHLKWTLETFLKAFFERDDVVLRMRPSYFPFTEPSAEVDVGWSMEKGRRVVGGCE
                     GWMEVLGSGMVHPNVIANCGLDPDEWQGFAFGTGVDRLAMLKYGMDDLRAFFDGDLRW
                     LKHYGFRALDVPTLSGGVGA"
     gene            1247..3598
                     /gene="pheT"
                     /locus_tag="VHN55_10640"
     CDS             1247..3598
                     /gene="pheT"
                     /locus_tag="VHN55_10640"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020817518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEX2804417.1"
                     /translation="MKFSLSWLNEHLETDASAEAIAERMTAIGLEVEDLSNPAEALAP
                     FKVAKVLTAAKHPQADKLQVLTVDAGEGAVQVVCGASNARAGMLGVFGPPGAYIPGSD
                     MTLKIAAIRGVESRGMLCSIRELELGDEHEGIIELAEDAPVGARFADYAELNDPVFDV
                     AITPDRADCMGVRGIARDLAAAGVGVLKPLRVPQVKGGFASPVEIRIEDTEGCPAFFG
                     RAIRGIANNSSPEWMQRRLKSAGQRPISAIVDITNYVMLDLGRPSHAYDVAKLDKALV
                     ARRARDGETVLALNEKEYVLDSSMTVIADESRVHDIGGIMGGEDSGVSEATSEIMLEV
                     AYFDPVRIARTGQKLALTSDARSRFERGVDPAFLEDGLAILTGLILDICGGEASEALL
                     VGNAPVEKRTIAFDPGRTLKLGSIDVSEERQRAILLSLGFEFEGADAVQVPSWRRDVE
                     GPADLVEEVARIVGYDRIPSTPLERDAGVAKPTATRSQMLERRVRRAAAARGIDEAVT
                     WSFVSEAQAAPFGPAWRLENPISEDMKIMRPSLLPGLIAAAGRNLDRGAPSVRLFEIG
                     RRYLADAERPTVALVLAGESSPRGWQSGKALAFDAFDAKAEVLALLDAAGAPIANLQT
                     IPDAGSTWHPGRSAKLGLGPKTILSSFGELHPALLKQLDAPEGLIAAEIYLDSIPEPR
                     SSGRARPQFQPAALQPVSRDFAFIVPADIAADELARALRGADKAAIASVRLFDRFEAP
                     EGLSLAFEATLQPGDKSFTEEELAATSKKIVAAAEKLGAKLRG"
     gene            complement(3595..4278)
                     /locus_tag="VHN55_10645"
     CDS             complement(3595..4278)
                     /locus_tag="VHN55_10645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX2804418.1"
                     /translation="MQLLRAFGYTLLFYPTTALFVFAGVAASLFGAASTRALVGRWVR
                     FHRSLAKVVLGIRTRVEGEIPAGPVLIAVKHESMYETLEMVRVAGTPVIVLKRELSNI
                     PLFGWLTRRYGVIAVDRSAGPKALREMVAAGRDAVAGGRPVMIFPEGTRVPHGEAPAL
                     RSGFAGLYRALGLPVVPVAVDSGRLWGKGLRKCRGVVHFRIGETIPPGLGRDAIEARV
                     HAAINALNG"
     gene            complement(4289..4816)
                     /locus_tag="VHN55_10650"
     CDS             complement(4289..4816)
                     /locus_tag="VHN55_10650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004208935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEX2804419.1"
                     /translation="MIVRFFSILLLLYMLGFMLFAVTLAAPAGRQRTDAVVVVTGGPG
                     RIERGIDVLSGGYAERMLISGTDPSVTKPDLVRLKGKAKLIDCCVDLGSESVDTRSNA
                     EETRRWLDKRGYRSLRLVTSDWHMRRARYEFRRVLDDKYDIVSDAVSTRPSFGTLAGE
                     YNKLLLRRVTILFDL"
     gene            complement(4813..5691)
                     /locus_tag="VHN55_10655"
     CDS             complement(4813..5691)
                     /locus_tag="VHN55_10655"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX2804420.1"
                     /translation="MILDRIWTPAPQARLLPVEKLHVPTLAVTAIMTFAMVLVAAAGL
                     ALANAASLVAGGAENSYVVELPAAAVPDLPRAVEAAKAVPGVRNVTPVPEAEMRRTLE
                     RWLGEAASSPDLPVPALVTVELAPGADPQALASRVRDRVPQATVIAQTAELRPLLRSI
                     RALQWLALSLVVLMAVATAAAIVLAARGALDTHRPTVEIMHGIGATDAQITRLFVRKI
                     AVDSAAGALAGLLVAAATLLLLGGGIAALAGEFAATGPLGTVDLAVLVLIPVAAVAIA
                     VTVAHWTLLKALRSTL"
     gene            complement(5688..>6317)
                     /locus_tag="VHN55_10660"
     CDS             complement(5688..>6317)
                     /locus_tag="VHN55_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX2804421.1"
                     /translation="GSFYFLAGASGAGKTSLLKLLYLAQRPTRGRIRLFGHDLSDAAR
                     EELPALRRRIGVVFQDFRLIRHLSAFDNVALPLRIAGRNEAEIASAVGEMLDWVGLGD
                     RSGARPATLSGGEQQRVAIARAVITKPDLLVADEPTGNVDSDMAKRLLHLFAALNELG
                     TTVVVATHDLGLIASTPRAELMRLDSGSLVDPTGSLRNPPRNDRIEARP"
BASE COUNT         1115 a         2102 c         2126 g          974 t
ORIGIN      
        1 gatgaacacg ccggcgaccc cggtcggccc ggcctgcgcg atctgcccgc gaatcggctg
       61 cgcctatcgg gcgacggcgc cggccgggcg gatgcttgcg gtcgaggaga accggaagac
      121 gatctcgccc tacccgttcg tcgcgggcta gcatttcgcg ggcgagcgcg gctaagtccc
      181 gcgccatggc cgacctcacc gaccagatcc gcgccgcgcc cgacctccag gccctcgacg
      241 cattgcgcgt gtcggcgctt ggcaagtcgg gaagcatcac gacccagctc aagtcgctcg
      301 gcaagatgag cccggatgag cgcgccgcag aggcgccgaa gatccatgcc tttcgcgagg
      361 cggtcaccga ggcaatcgcc gcgcgcaagg cggagctcga gaccgctgag ctggagaaac
      421 gcctcgccac cgagcgggtc gacctgtcgc ttcccgctcc ggaggcaccg cagggcagcg
      481 tacaccctgt cagccaggtg atggacgagc tcgccgagat tttcgcagac ctcggctttt
      541 cggtcgccga aggaccggag atcgaagagc agtggtataa tttcaccgcg ctcaacatgc
      601 ccgaatttca ccccgcacgg gcaatgcaag acaccttcta ctgccggcga atggacgacg
      661 acccggccgc tgaagcgcac gtgcttcgaa cccacacatc gccggtgcag atccgggcga
      721 tgacgtcggg gccgccgccg ttccgcctga tcgcgccggg gcgagtgtac cgttccgaca
      781 gcgacgccac ccacacgccg atgtttcatc aggtcgaagg gctggtgatc gaccgggcca
      841 tcacgatggg ccatttgaaa tggacccttg agacattcct caaggcgttt ttcgagcggg
      901 atgatgtcgt cctccggatg cgcccctcct acttcccctt caccgagcct tcggccgagg
      961 tcgacgtcgg ctggtcgatg gaaaagggcc ggcgcgtggt cggcggctgc gaggggtgga
     1021 tggaagtgct gggctcgggg atggtccatc ccaacgtgat cgccaattgc gggctcgacc
     1081 cggatgagtg gcagggtttc gccttcggca ccggcgtcga tcggctggcg atgctcaaat
     1141 atggaatgga cgatcttcgc gccttcttcg acggcgattt gcgctggctg aagcattacg
     1201 gcttccgggc gctagacgtt ccgactttgt caggtggagt cggggcatga aattctcgct
     1261 gtcctggttg aacgagcacc tcgagaccga cgcttccgcc gaggccattg ccgagcggat
     1321 gactgcgatc gggctcgagg tcgaggacct gagcaacccc gccgaagctc tggcgccgtt
     1381 caaggtcgcc aaggtgctca ccgctgcaaa gcacccgcag gcggacaagc tccaagtgct
     1441 caccgtcgat gccggcgaag gcgcggtcca ggtcgtgtgc ggcgcgtcca acgcccgcgc
     1501 cggaatgctc ggcgtgttcg ggcctccggg cgcttacatc cccggcagcg acatgacttt
     1561 gaagatcgcg gcaatccgtg gggtcgagag ccgcggaatg ttgtgctcga tccgcgagct
     1621 ggagctcggc gatgagcatg aggggatcat cgagctcgcc gaagacgctc ctgtcggcgc
     1681 ccgctttgcc gactatgccg agttgaacga ccctgtgttc gacgtcgcga ttacgcccga
     1741 ccgagccgac tgcatgggcg ttcgcgggat cgcacgcgat ctcgctgcag cgggcgtcgg
     1801 cgtcctgaag ccgcttcgcg tgccgcaagt caaaggcggc ttcgcttcgc cggtcgaaat
     1861 caggatcgag gacaccgaag gttgccccgc ctttttcggc cgcgccatcc gcgggattgc
     1921 caacaacagc tcgccggagt ggatgcagcg tcggctgaaa agcgccgggc agcggccgat
     1981 ctcggcaatc gtcgacatca ccaactacgt gatgctcgac ctcggacggc ccagccacgc
     2041 ttacgacgtt gccaagctgg acaaggcact ggtcgcccgc cgagcgcgcg acggcgaaac
     2101 ggtgctggcg ctcaacgaga aggaatatgt actcgattcg tcgatgacgg tcatcgccga
     2161 cgagagccga gtccacgaca taggcgggat catgggcggc gaggattcag gcgtttcgga
     2221 ggccacgagc gagatcatgc tcgaggtcgc ttatttcgac ccggtgcgga tcgctcggac
     2281 cggccagaag ctggcgctga ccagcgatgc gcgaagccgc ttcgagcgcg gcgtcgaccc
     2341 cgcattcctg gaggacggcc tggcgatcct gacggggctc atcctcgaca tctgcggcgg
     2401 cgaggcatcg gaggcgctgc tggttggcaa cgctccggtc gagaagcgca cgatcgcgtt
     2461 cgacccgggc cgcacgctga agctgggctc aatcgacgta tccgaggagc ggcagcgggc
     2521 gatccttctg tcgctcggct tcgagttcga aggcgccgat gctgtccagg tgccgagttg
     2581 gcgccgcgat gtagaaggtc ccgccgacct ggtcgaggaa gtcgcccgga tcgtcggcta
     2641 tgaccggatc ccctcgactc cgctggagcg ggatgccggg gtcgcaaagc cgaccgcgac
     2701 ccgctcgcag atgctggagc ggcgggttcg ccgcgccgca gccgctcgcg gcatcgacga
     2761 ggcggtgacg tggagctttg tctccgaagc tcaggcggcg ccgttcggtc cggcctggcg
     2821 gcttgaaaac ccgatcagcg aagacatgaa gatcatgcgg ccgtcgctcc tgccggggct
     2881 gatcgcggcc gccggccgca acctcgatcg cggtgcgcca tcggtgcgct tgttcgagat
     2941 cggtcgccgc tacctggccg acgccgagcg cccgaccgtt gcgctcgtgc ttgccggcga
     3001 aagctcgccg cgcggatggc aatcgggcaa ggccctggcg ttcgacgcgt tcgacgccaa
     3061 ggccgaagtg ctcgccctgc tcgacgcagc cggagcgccg atcgccaacc tgcagaccat
     3121 tccggacgcc gggtcgacct ggcacccggg gcgttccgcg aaactgggtc tcgggcccaa
     3181 gacgatcctc tccagcttcg gcgagcttca cccggcgctg ctcaagcagc tggatgcgcc
     3241 agaagggctg atcgccgccg aaatctatct cgactcgatc cccgagccgc gaagcagcgg
     3301 ccgcgcacgc ccgcagttcc agccggcagc gctccagccc gtcagccgtg atttcgcctt
     3361 catcgtcccg gcggacattg ccgccgacga gctcgcccgg gcgcttcgcg gagccgacaa
     3421 ggcggcgatc gccagcgttc ggctgttcga ccgcttcgaa gcgccggaag ggctatcgct
     3481 cgcgttcgaa gcgactctgc agcccggcga caagagcttc accgaggagg aactcgcagc
     3541 gacgtcgaaa aagatcgtcg cagcggcgga gaaactcggc gcgaagctgc gcggctagcc
     3601 gttcagggca ttgatcgcgg cgtgcacgcg cgcctcgata gcgtcgcgcc cgagacccgg
     3661 cgggatcgtc tcgccgattc gaaaatgtac gactccacgg catttccgga gccccttccc
     3721 ccacagccgt ccgctgtcga ccgcgaccgg gaccaccggc agcccgagcg ctcgatacag
     3781 gccggcaaag cccgaacgca gggccggagc ctcgccgtgc ggaacgcgcg ttccttcggg
     3841 gaagatcatc accggccgcc cgccggcgac cgcgtcgcgg ccggcggcca ccatctcgcg
     3901 gagcgccttc gggccggcgc tgcggtcgac cgcaatgacg ccatagcgcc gcgtgagcca
     3961 gccgaagagc gggatattcg agagctcgcg cttgaggacg atgaccggcg ttccggccac
     4021 ccgcaccatt tcgagcgttt cgtacatcga ctcgtgcttg accgcgatca gcaccggacc
     4081 ggcgggaatc tctccttcca cgcgggttcg gatcccgagc accaccttcg ccagcgaccg
     4141 gtggaagcgg acccagcgcc cgaccagcgc acgtgtcgag gcggccccaa agaggctcgc
     4201 ggcaacgccg gcaaagacga acagcgccgt cgtcggatag aacagcaatg tgtagccaaa
     4261 tgcgcggagg agctgcatcg gctcggcgct agaggtcgaa gaggatggtc acgcgccgca
     4321 acagcagctt gttatattcg ccggccagcg tcccgaagct cgggcgggtc gaaacggcgt
     4381 cggaaacgat gtcgtacttg tcgtcgagca cgcgccggaa ctcgtagcgc gcccggcgca
     4441 tatgccagtc gctggtgacg aggcgaaggc tccggtaccc gcgcttgtcg agccagcgcc
     4501 tggtttcctc tgcattcgag cgcgtgtcga ccgattcgct tcccaggtcg acgcagcaat
     4561 cgatgagctt tgccttgccc ttgagccgga ccaggtcggg cttggtcacc gaaggatccg
     4621 tcccggagat cagcatgcgc tccgcatacc cgccggaaag cacgtcgatt ccgcgctcta
     4681 tccgcccagg accgccggtg accacgacaa cggcgtcggt ccgctgccgc cctgccgggg
     4741 cggccagggt aaccgcaaac agcatgaagc cgagcatgta gaggagcaga aggatcgaga
     4801 agaagcggac aatcaaagcg tcgaccgtaa tgccttgagc agcgtccaat gcgcaacggt
     4861 tactgcaata gccaccgccg caaccggaat caggaccagg accgcgagat cgaccgtgcc
     4921 caacggacca gtcgcggcga actcgccggc gagtgccgca attccacctc ccagcaacag
     4981 gagcgtcgcg gcagccacta aaagtccggc aagagcgccg gcggccgaat ccacggcaat
     5041 cttgcgaacg aacagcctgg tgatctgggc gtcggtggcg ccgatgccgt gcatgatctc
     5101 gaccgtcggc cggtgcgtgt cgagcgcccc gcgtgcggcg aggacgatcg ccgcggcggt
     5161 tgccacggcc atcaagacca ctagcgaaag agccagccac tggagcgccc tgatcgacct
     5221 aaggagtggc ctcaactcgg cagtctgggc aatcaccgtt gcctgtggga cccgatcgcg
     5281 gacgcgcgac gccagcgctt gcggatccgc accaggagca agctcgaccg tgaccagagc
     5341 cggcaccgga aggtcggggc tggaggctgc ttcgccgagc cagcgctcga gcgtccggcg
     5401 catttccgcc tccgggacag gggtgacatt gcgcactccc gggacggctt tcgccgcttc
     5461 gacggcacgc ggaagatccg gaaccgctgc tgccggcaac tcgacgacat agctgttttc
     5521 cgctcccccc gcgacaagcg aggccgcgtt ggcgagggct aggccggcag cagcgaccag
     5581 caccatcgcg aaggtcatga tcgccgtcac tgcaagcgtt gggacgtgaa gcttctcgac
     5641 cggaagcagc cgcgcctgcg gcgccggggt ccagatgcgg tcgagaatca tgggcgcgcc
     5701 tcgatcctgt cgttgcgcgg cgggttacga agcgatcctg tcgggtcgac gagcgagccc
     5761 gaatcgagcc gcatcagctc ggcccggggg gtagaggcaa tcagcccgag gtcgtgggtc
     5821 gcgacgacga cggttgtacc gagctcgttg agggccgcga acaggtggag gagccgcttt
     5881 gccatgtccg agtcgacatt gccggtcggt tcgtcggcga ccaaaaggtc gggcttggtg
     5941 atcactgcgc gagcgatggc cacccgctgc tgttcgccgc cggaaagggt tgctgggcgg
     6001 gcgcccgagc ggtcgccgag gccgacccag tcgagcattt cgccaaccgc ggaggcgatc
     6061 tccgcctcgt tgcggccggc aattctcagc ggaagcgcga cattgtcgaa tgccgagaga
     6121 tggcggatga gccggaagtc ctggaagacc actccaatcc gccggcggag cgcgggaagc
     6181 tcttccctcg cggcgtcgct gaggtcgtgc ccaaacaggc gaatgcgccc gcgggtcggc
     6241 cgctgggcga ggtacagcag cttcaacagc gacgtctttc ccgcgccgga agctccggcg
     6301 aggaagtaga agctccc
//
LOCUS       DATAKH010000250         7080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35241,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000250 DATAKH010000000
VERSION     DATAKH010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7080
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35241"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VHN55_10665"
     CDS             complement(<1..258)
                     /locus_tag="VHN55_10665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX2804422.1"
                     /translation="MIRPLMLALAASAFVATAGNAQVMPGDLKWGPAPPGLPAGAQLA
                     VLSGDPTKQGMFTIRLKFPPGFSVAPHHHPTPELVTVVDGQL"
     gene            471..902
                     /gene="rplK"
                     /locus_tag="VHN55_10670"
     CDS             471..902
                     /gene="rplK"
                     /locus_tag="VHN55_10670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011240610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEX2804423.1"
                     /translation="MAKKITGYIKLQVPAGIANPSPPIGPALGQRGVNIMEFCKAFNA
                     ATQEMEKGAPVPTTITVYADRSFSFVTKTPPASFLLKKAARIKKGSSETGKESAGTIK
                     RSQLREIAEAKMADLNANDLDAASKIIEGSARAMGLTVVEG"
     gene            906..1601
                     /gene="rplA"
                     /locus_tag="VHN55_10675"
     CDS             906..1601
                     /gene="rplA"
                     /locus_tag="VHN55_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEX2804424.1"
                     /translation="MAKLSKRQQALTPVDRNKFYGVDEAIALVKANATAKFDETVELA
                     LNLGVDPRHADQMVRGVVSLPKGTGKDVRVAVFAKGDKADEAKAAGADIVGAEDLMEE
                     IQGGKSDFDRVIATPDMMGVVGRLGKVLGPKGLMPNPKLGTVTPNVGEAVKAAKSGQV
                     EFRVEKAGIVHAGIGKASFPEEDLKANFTAFMDAISKAKPSGAKGKFVQKVALTSSMG
                     PGVKLDLEEVPGA"
     gene            1749..4472
                     /locus_tag="VHN55_10680"
     CDS             1749..4472
                     /locus_tag="VHN55_10680"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019051944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEX2804425.1"
                     /translation="MKLMKTLLATAALAAAVQAQAAPPPPAQADTVDLAVPTQLPRTA
                     VPSHYALTVTPHAPTLTFDGNVVIDLKVVQPTDALVLNALDLDIKKASLSPRSGAALP
                     ATVTMDEEAQTASLAFGRRLQPGQYRLTIDYSGKINEQANGLFALDYKNPAGAEKRAI
                     FTQFEPADARRFVPTWDEPDYKATWDVTAVVPAGEMPVSNMPVKSSAAIAGGLKRVTF
                     DRTPPMSTYLLFLGSGEFGRIKTMAGDTEVGIVMGRGNESKAQTALEGAAQILPYYND
                     YFGVAYPLPKLDNVAGPGQSQFFSAMENWGAIFTFERILLDDPAVTTEGERQAIFGVN
                     AHEMAHQWFGDLVTMAWWDDLWLNEGFASWMATKATKHFHPDWGAEFDAIGSREAAMG
                     QDSLTTTHPIVQQVRTVEQANQAFDSITYSKGQSVISMFEGFAGADVWQRGIQAYMRK
                     HAFRNTRTDDLWRAVEAAGATGLTQMAHDFTLQPGVPLIRVGAATCQSGQTQVTLVQD
                     EFSVDRKPGSFQPLSWHVPVRAMTIGGKPVTAITQGRETQMTVPGCGPLIVNTGQTGY
                     FRSLYEPAGAQRLLTAFNQLGALDQYGLVEDQASLSYANYQPMGIALEFISAIPADAR
                     PELIGLGLGNWSGLYQAFDGDPANQKRIAAIIEQRYAPVLAQIGLVPRPNEKPSITTL
                     RPGLISVLGRIRNPNITAEAKRLFTAMQTDANAVPGGLKRTWLAIIAANADAATWEQI
                     HAMARNASSATERQNLYSLLGAAEDETLARRTLELALTDEPGKTISAGMIGAVSNRHP
                     ELALDFVTSHWDQVSRFVDASSQSRFVARVASGSDKAETITKLESYASEHIAASARKP
                     IDQAINRIKVRLETEPRIRAQVGEWLQSHAPAAAAPAAAPAATAPSLPERG"
     gene            4738..5253
                     /gene="rplJ"
                     /locus_tag="VHN55_10685"
     CDS             4738..5253
                     /gene="rplJ"
                     /locus_tag="VHN55_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011541994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEX2804426.1"
                     /translation="MDRSQKADLVDQLKQVFSETSVVVVTRNLGLSVEQSTDLRLKMR
                     DAGAQFKVAKNRLALIALDGTRYQPIGDLLKGPTALATSNDPVAAAKVAVDFAKTNDR
                     LEIVGGAMGDTVLDVDGIKALAALPSLDELRAKIVGLIQAPASKIARTVNEPGAQLAR
                     VFAAYGAKEAA"
     gene            5307..5687
                     /gene="rplL"
                     /locus_tag="VHN55_10690"
     CDS             5307..5687
                     /gene="rplL"
                     /locus_tag="VHN55_10690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007687446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEX2804427.1"
                     /translation="MADINKLVDQLSELTVLEAADLAKALEEKWGVSAAAAVAAAPAA
                     GGGAAGGAPAEEKSEFDVILTGDGGKKINVIKEVRAITNLGLGEAKALVEGAPKAVKE
                     GVSKDEAEKIKKQIEDAGGTVELK"
     gene            5852..>7080
                     /locus_tag="VHN55_10695"
     CDS             5852..>7080
                     /locus_tag="VHN55_10695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006832482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX2804428.1"
                     /translation="MKRLLLVGAASLVSAPAWAAPEKSENVTAAAAEQATQLPGDQDD
                     SEVIVTGARSILPATALPLTFDVLGGEQLEEQVLISGSVIDAVSATMPSFSPTREKLS
                     GSGESLRGRSALFAINGVPQSTPIRDGSRDAYTIDPFFIERVEVIYGSNALQGIGATG
                     GVVNQVTVGAPAADGWSFRTQNQTTAQDGFSGNSLGAKTAGLASWRGGAFDATAGLSF
                     ERRGAFVDADGQRLGVDGTQGEIQDSDSWSAFGRFGWQVSDSARFEVVANRFDLEGNG
                     HYVVVEGDRTEGIPTSSELGETPGEPPSNRAELLSASFTDKDLAGGNLAGQAFFSRTR
                     DIFGGGAFATFQDPAIDPTGNLFDQSVNNSRKFGGKLSYQRAVPGFEDLLVTAGIDAL
                     FDRTAQSLLLTGRDWVP"
BASE COUNT         1311 a         2304 c         2344 g         1121 t
ORIGIN      
        1 cagctgcccg tccaccaccg tcaccagctc gggcgtcgga tgatggtgcg gggcgaccga
       61 gaagccgggc gggaatttca ggcggatggt gaacatcccc tgcttggtcg ggtcgccgga
      121 cagcaccgcg agctgcgctc cggccgggag gcccgggggc gccggtcccc atttgaggtc
      181 gccgggcatc acctgggcgt tgccggcggt tgcgacgaaa gcgctcgcgg cgagcgcgag
      241 catgagcggt cggatcatcg gatatcccct gtgtttccgt tcacccaccg cggcctcccc
      301 taccactttc gggaaagatt gcgtacccgg cacgcatcca ctatgtggcc cgcctccagc
      361 gcatcagcat tggaaccatt gtgggagatt gcctccgggc agtcgcatgc accactaaac
      421 ttcgaacccc tcgctcaaag taccactttg agcgaaaccg agagtgagac atggcaaaga
      481 aaattaccgg ctatatcaag ctgcaggtgc ccgcgggcat cgccaatccg tcgccgccga
      541 tcggcccggc gcttggccag cgcggcgtca acatcatgga attctgcaag gcgttcaacg
      601 ccgccacgca ggagatggaa aagggcgctc cggtgccgac caccatcacc gtctatgcgg
      661 accgttcgtt cagcttcgtc accaagaccc cgcccgcaag cttcctcctg aagaaggcgg
      721 cgcggatcaa gaagggctcg agcgagaccg gcaaggaaag cgccggaacg atcaagcgct
      781 cgcagcttcg cgagatcgcc gaggcgaaga tggccgacct caacgccaac gacctcgacg
      841 ccgcgtcgaa gatcatcgaa ggcagtgccc gcgcgatggg cctcaccgtg gtggagggct
      901 aagacatggc aaagctttcg aagcggcagc aggcgctcac ccccgtcgac cgcaacaagt
      961 tctacggcgt cgatgaggcg atcgcgctgg tcaaggccaa cgcgaccgcc aagttcgacg
     1021 aaacggtcga gctggcgctc aacctgggag tagatccgcg ccacgccgac cagatggtcc
     1081 gcggagtcgt ctcgcttccc aagggcaccg gcaaggacgt ccgcgtcgcg gtgttcgcca
     1141 agggcgacaa ggccgacgag gccaaggcgg cgggcgccga catcgtcggt gccgaggacc
     1201 tgatggaaga gatccagggc ggcaagagcg acttcgaccg ggtcatcgcg accccggaca
     1261 tgatgggcgt cgtcgggcgg ctcggaaagg tgctcggccc caaggggctg atgcccaacc
     1321 cgaagctcgg caccgtcacc cccaacgtcg gcgaagcggt caaggcggcc aagtccggcc
     1381 aggtggagtt ccgcgtcgag aaggcgggga tcgtccacgc cgggatcggc aaggcgagct
     1441 tccccgagga agacctcaag gccaatttca ccgcgttcat ggacgccatc tccaaggcaa
     1501 agccgtcggg cgccaagggc aagttcgtgc agaaggtcgc actgaccagc tcgatgggcc
     1561 cgggcgtcaa gctcgacctc gaagaggttc cgggcgcctg agccgatgcg tgaggcgggg
     1621 ccgtcgcggc tccgcctcgc cgcccgggga agggcagcga ccgttcgtcg aacggcgggg
     1681 tgatttgccg ggcttcgcgg gctaggggcg cgcgcgacca tattcgtccg gcaaggggtt
     1741 ccacgcacat gaagctgatg aagacgctgc tcgcaacggc ggcactggcc gccgccgtcc
     1801 aggcgcaggc cgctccgcct cctcccgccc aggccgacac cgtcgacctc gcggtcccga
     1861 cccagcttcc ccgcaccgcg gttccaagcc attatgcgct gaccgtcacg ccgcacgccc
     1921 cgacgctgac cttcgatggc aatgtcgtca tcgacctcaa ggtggttcag ccgaccgacg
     1981 cgctggtcct caacgcgctg gatctcgaca tcaagaaggc ttcgctgtcg ccgcggtcgg
     2041 gcgctgcgct tccggccacc gtcacgatgg acgaggaggc gcagaccgcc tcgcttgcgt
     2101 tcgggcggcg cctgcagccc ggccagtacc ggctgacgat cgactattcg ggcaagatca
     2161 acgagcaggc gaacggcctg ttcgccctcg actacaagaa ccccgccggc gccgagaagc
     2221 gggcgatctt cacccagttc gagcccgccg acgcgcgccg cttcgttccg acctgggacg
     2281 agcccgacta caaggcgacc tgggacgtga ccgcggttgt tccggcgggc gaaatgccgg
     2341 tcagcaacat gccggtgaag agcagcgctg cgatagcggg cgggctcaag cgggtgacgt
     2401 tcgaccgcac tccgccgatg tcgacctatc tcctcttcct gggatcgggc gagttcgggc
     2461 ggatcaagac gatggccggc gataccgaag tcgggatcgt catgggccgc ggcaatgaat
     2521 cgaaggcgca gaccgcgctc gagggcgcgg cgcagatcct gccttactac aacgactatt
     2581 tcggagtggc ctatccgctt ccgaagctcg acaacgtcgc cgggcccggc cagtcgcaat
     2641 tcttcagcgc gatggagaat tggggcgcga tcttcacctt cgagcgcatc ctgctcgacg
     2701 atcccgcggt caccaccgag ggcgaacgcc aggcgatctt cggagtcaat gcgcacgaga
     2761 tggcgcacca gtggttcggc gatctcgtca ccatggcatg gtgggatgat ttgtggctga
     2821 acgaaggctt tgccagctgg atggcgacca aggccaccaa gcacttccac cccgactggg
     2881 gcgcggagtt cgacgcgatc ggctcacgcg aggcggcgat ggggcaggat tcgctgacga
     2941 ccacccaccc gatcgtccag caggtccgga ccgtcgaaca ggcgaaccag gcctttgaca
     3001 gcatcaccta ttcgaaaggc cagtcggtca tctcgatgtt cgagggcttc gccggagccg
     3061 acgtgtggca gcggggcatc caggcctata tgcgcaagca cgctttccgg aacacccgca
     3121 ccgacgacct gtggcgagcc gtcgaagcgg ccggggcgac cggcctgacc cagatggcgc
     3181 atgacttcac gctgcagccc ggggttccac tgatccgcgt cggggccgcg acctgccaga
     3241 gtggccagac ccaggtgacg ctggtccagg acgagttctc ggtcgaccgc aagccgggtt
     3301 cgttccagcc gctgagctgg cacgtgccgg ttcgtgcgat gacgatcgga ggcaagccgg
     3361 ttactgccat cacccaaggg cgcgaaactc aaatgaccgt tcccggctgt ggcccgctga
     3421 tcgtcaatac cggccagacc ggctatttcc gaagcctcta tgagccggcc ggcgcgcagc
     3481 ggctactgac cgctttcaac cagcttggag cgctcgacca gtacggcctt gtcgaggatc
     3541 aggcgtcgct gtcctatgcc aattaccagc cgatggggat tgcgctggag ttcatcagcg
     3601 cgatcccggc cgatgcgcgc ccggagttga tcggccttgg cctcggcaac tggagcgggc
     3661 tgtaccaggc cttcgacggc gatcctgcca accagaagcg gatcgcagcg atcatcgagc
     3721 agcgttatgc accggtcctg gcgcagatcg ggctcgtccc ccggcccaac gaaaagccgt
     3781 cgatcacgac gctgcgtccg gggctgattt ccgtgctcgg ccgcattcgc aatccgaaca
     3841 tcacggccga ggcgaagcgc ctgttcacgg cgatgcagac ggacgcgaat gccgtgccgg
     3901 gagggctcaa gcggacctgg ctcgcgatca tcgcggccaa tgccgatgcg gcgacttggg
     3961 agcagatcca cgcgatggcg cgcaacgcgt cgagcgcgac ggaacggcag aacctttatt
     4021 cgctgcttgg agcggcggag gacgagacgc ttgcgcgccg gaccctcgag ctcgccctga
     4081 ccgacgagcc aggcaagacg atcagcgccg gcatgatcgg cgcggtctcg aacaggcacc
     4141 cggagctggc gctcgacttc gtgaccagcc actgggatca ggtttcgagg ttcgtcgatg
     4201 cgtcctcgca gtcgcgattc gtcgctcgag tggcgtcggg aagcgacaag gccgagacga
     4261 tcaccaagct cgaaagctac gcaagcgagc atatcgcggc gagcgcccga aagccgatcg
     4321 accaggcgat caaccgtatc aaggtgcggc ttgagaccga gccgcggatc agggcgcagg
     4381 tcggcgagtg gctgcagtcg cacgctcccg ccgctgcggc tcccgcagca gctccggccg
     4441 ctacggcccc gtcgcttccc gaaagaggtt gatcgtccac gcgaaaccgc tataggcgcg
     4501 gcctcgcatc ggcttgtccg gtgcaaccgt ccgagacagt tgctggggct tgccccttaa
     4561 ttcgcagcct agacggggac aggaatcatt cggcgggctt gcccgctgcc gtgcgttgcc
     4621 tcctgggcgc gccagcgatc caactcccca cggacaccat cgcccgggcg aaagccgtcc
     4681 gggcatttgt tgaacctcgg tcagggcttc ggctccggcc gaatagttgg agttggcatg
     4741 gatcgttcgc aaaaagccga tctggtcgac cagctgaagc aagtcttctc ggagacgagc
     4801 gtcgtcgtcg tgactcgcaa cctcgggttg tcggtcgagc agtcgacgga tctccgactg
     4861 aagatgcgcg acgctggcgc ccagttcaaa gttgcgaaga accggcttgc actcatcgcc
     4921 ctggacggca ctcgctacca gccgatcgga gaccttctaa agggaccgac cgcgcttgcg
     4981 acgtccaatg accccgtcgc ggctgccaag gtcgcggtgg atttcgccaa gacgaacgac
     5041 aggctcgaaa tcgtcggcgg agcgatgggc gacaccgtgc tcgacgtcga cgggatcaag
     5101 gccctggccg cgcttccgtc gctcgacgag cttcgggcca agatcgtcgg gctcatccag
     5161 gcgcctgcga gcaagatcgc tcgcaccgtc aacgagccgg gcgcgcagct ggcgcgggtc
     5221 ttcgcggcct atggggccaa ggaagccgct taagtttctt tgttttcaac gcacatgggg
     5281 tgagaccccg cacaggagtt tgaacaatgg ctgacatcaa caagctggtc gaccagcttt
     5341 ccgaactgac cgttctcgag gccgccgacc tggcgaaagc gctcgaggaa aagtggggcg
     5401 tttcggcagc ggctgcggtt gcggctgctc cggctgccgg cggcggcgcc gcgggcggcg
     5461 ctccggccga agagaagagc gagttcgacg ttatcctcac cggcgacggc ggcaagaaga
     5521 tcaacgtgat caaggaagtc cgcgcgatca ccaaccttgg cctcggcgag gcgaaggccc
     5581 tggtcgaagg cgctcccaag gccgtcaagg aaggcgtgtc gaaggacgag gccgagaaga
     5641 tcaagaagca gatcgaagac gccggcggaa ccgtcgagct caagtaagct tcgaaaaatg
     5701 atttcgcgga tgtcttgaag cattcgcgga caggaagggc ggctccgcaa ggggtcgccc
     5761 ttttttcggg gcaatgtcct cttctgctat tgataagcgt tcgcaacaac gataggccgc
     5821 cgaccgttgg agtgtagcaa aggggtccga agtgaagcgg ttgttgttgg ttggtgcggc
     5881 gtcgttggtt tcagctccgg cctgggcagc tcccgagaaa tccgaaaacg tcacagccgc
     5941 cgccgccgag caggcgacgc agcttcccgg cgaccaggat gattccgaag tcatcgtcac
     6001 cggtgcccga tcgatccttc ccgcgaccgc cctgccactg acgttcgatg tcctcggcgg
     6061 cgagcagctc gaggagcagg tgctcatctc cggctcggta atcgatgcgg tttcggcgac
     6121 gatgccgtcc ttctcgccga cccgcgagaa gctgtcgggc tcgggcgaga gcttgcgcgg
     6181 ccggtcggcg ctgttcgcga tcaacggggt tccgcagtcg accccgatcc gcgacggatc
     6241 gcgtgacgcc tacacgatcg accccttctt catcgagcgg gtcgaggtga tctacggatc
     6301 caacgcgctg caggggatcg gcgcgaccgg cggcgtcgtg aaccaggtga cggtcggagc
     6361 acccgccgcg gacggttggt ctttcaggac tcagaaccag acgaccgcgc aagacggctt
     6421 ttccggcaat agtctcggcg cgaagaccgc gggcctggcc tcgtggcgag gcggcgcgtt
     6481 cgacgcgact gcagggcttt cgttcgagcg gcgcggagcg ttcgtcgatg ccgacgggca
     6541 gcggctcggg gtcgacggga cccagggtga aatccaggac agcgacagct ggtcggcgtt
     6601 cggccgcttc ggctggcagg tcagcgacag cgcccgcttc gaagtcgtcg ccaaccgctt
     6661 cgacctcgaa ggcaacggcc attatgtcgt cgttgaaggc gaccgcacgg aagggattcc
     6721 gacctctagc gaactcggcg aaacgccggg tgagccgccg tcgaaccgcg ccgagctgtt
     6781 gtcggcatcg ttcaccgaca aggacctcgc gggcggcaac cttgccggcc aggccttctt
     6841 cagccgcacc cgcgacatct tcggcggcgg ggcgttcgcg accttccagg acccggccat
     6901 cgacccgacc ggaaacctgt tcgaccagtc ggtgaacaac agccgcaagt tcggcggcaa
     6961 gctcagttat cagcgggcag tgccgggatt cgaagacctg ctggtcacgg ccggaatcga
     7021 cgccttgttc gaccgcacgg cgcagtcgct gctgctgacc gggcgcgact gggtgccgca
//
LOCUS       DATAKH010000251         9714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_35267,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000251 DATAKH010000000
VERSION     DATAKH010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 9714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9714
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35267"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..804)
                     /locus_tag="VHN55_10700"
     CDS             complement(<1..804)
                     /locus_tag="VHN55_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019370464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEX2804429.1"
                     /translation="MANDPWTEIGAYELKRLDRLFAEEPDRLERLAHEVAGIYFDWSK
                     THLDEPLIAAFAKLSEKRDFEAARDALFAGEVVNVTEGRPAEHVAERGSGSPAAVQLA
                     ASRRSRIRAVVDAIEAGAFGDVSAILHIGIGGSLLGPKLLVDALGQDGRRLQTRFLSN
                     IDPNAFREAIEPLDPATTLVIAASKTFTTAETMTNLAASLDWLVQGGVSDPYGRVIAV
                     TASPEAAVEAGIDESRILQFSEGVGGRYSLWSTVSISAALALGWEAFEEL"
     gene            882..1700
                     /gene="lepB"
                     /locus_tag="VHN55_10705"
     CDS             882..1700
                     /gene="lepB"
                     /locus_tag="VHN55_10705"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEX2804430.1"
                     /translation="MKRSPALKKQRRPGGGTLRFILIVALVAWMVRSMVFAPFSIPSG
                     SMLPTLHVGDYLIVAKWPYGYSRYSFPFQFPPLEGRIFSSLPERGDVVVFVTPDNKEQ
                     DYVKRLIGLPGDTIEVRNGRLVLNGRSVTGSRTERIAAAVSPNSPCRTIGTPTIGRNG
                     MCLRAGYRETLPNGASYRVLDQVSGGIGDNYPATKVPAGYVFLMGDNRDDSLDSRFSP
                     AEGGIGFVPLDHLVGRATMVFWSTDGSSSYVKPWTWFSALRTERLGKSLDSGAR"
     gene            1697..2362
                     /gene="rnc"
                     /locus_tag="VHN55_10710"
     CDS             1697..2362
                     /gene="rnc"
                     /locus_tag="VHN55_10710"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEX2804431.1"
                     /translation="MNDDVAKFVTERLAYEPADLALFESALTHSSSRGDNYERLEFLG
                     DRVLGLVMARWLYERFPNEPEGKLSKRFNTLVDRVTCGDVGREIGLPNVIRLGKQARD
                     DRANWSDNVLGDVVEALIGAVFLERGLEAAEALIRRLWGPLIEEQRRVPQHPKSALQE
                     LAAARDLPNPMYEVVSKTGSHHAPRFTVRASIPTLGDAEAEGTSKQEAETQAAQALLS
                     KLK"
     gene            2359..3264
                     /gene="era"
                     /locus_tag="VHN55_10715"
     CDS             2359..3264
                     /gene="era"
                     /locus_tag="VHN55_10715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016744641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEX2804432.1"
                     /translation="MRDETTRAGFVAVIGAPNAGKSTLVNALVGQKVAIVSAKAQTTR
                     ARLMGIAIEGGTQILLVDTPGIFEPRRRLDRAMVQAAWTGAEDAELVLLVIDSKAGAT
                     AEVERAIAGLEKRRHPLFIALNKTDLVKQKEQLLGLSLQLTQRLDPDKVFMISAAQGD
                     GVQDLKSALAQAMPEGPWLYPEDEVSDATDRMIAAELTREQIYEQLYQELPYSAAVET
                     ESWEDRPDGSAAIRQQILVERDSQKGIVIGKGGRRLKEIGEKARQAIAEHLGRDVHLF
                     LHVKVNPKWGEDRGLYREIGLEWAD"
     gene            complement(3261..3974)
                     /locus_tag="VHN55_10720"
     CDS             complement(3261..3974)
                     /locus_tag="VHN55_10720"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0017136 - NAD-dependent histone
                     deacetylase activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacylase"
                     /protein_id="HEX2804433.1"
                     /translation="MTDAVRNIVILTGAGVSAESGLSTFRGPDGLWEGHRVEDVATPE
                     GFARDPALVHAFYDARRARLSAVTPNAAHEALARLDREWPGELLLVTQNVDDLHERAG
                     SKRLVHMHGELAKGWCLRCDRRFGWTGPMGEGAACPSCGTSGLVRPDIVWFGEMPYRM
                     EEIDAAIDRCDLFVSIGTSGAVYPAAGFVQTARYCRARTLEMNLEPSLGSFLFGESRI
                     GRAGDLVPEWVEELLAGEA"
     gene            4140..4559
                     /locus_tag="VHN55_10725"
     CDS             4140..4559
                     /locus_tag="VHN55_10725"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEX2804434.1"
                     /translation="MKQQILTQEEAWGRAYAARDGEALAGFYTNDAALAAPGEQLVRG
                     RDALREATAGIVKDPNLSMVFRANRIEVADSGDLAYTRGQFMMTITDPATKRPQSSRG
                     YYLTVWQKQADGSWKAVEDFVTPGPALPVQERATMIL"
     gene            complement(4636..5724)
                     /locus_tag="VHN55_10730"
     CDS             complement(4636..5724)
                     /locus_tag="VHN55_10730"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX2804435.1"
                     /translation="MAERRAGQDEHLFLKLFAVPIGLAAIWFLYTVASGLLLLFLAMF
                     VAIGLNGPVLRLQRRGWTRHTAALVVLLAFFAVVVAVCWMVLPKIANQMVALVNGFPD
                     LITSGSKRLAYSLRNYPDLQEAVRLDGDALSGLAPDAVRLLVGGVGASFKVLEIAAAL
                     IVFFASIIYLTLNPKPLLVRYFSLYSDKLRPKAMRSFVRFSAMVAGWMRANAIVGSIQ
                     AVLVGTFLSLMDIPGALVWAALAFFSEFVPRLGGYIMATPPVLIALTVSPMTALWVAL
                     FYLVMNEALGNLVTPQVSGAQMNIHPFIIILSLVILALGFGFMGALVATPFAAFVIAH
                     LDGFRSREKQAAAEELVEKQSRRAKAGK"
     gene            5850..6407
                     /locus_tag="VHN55_10735"
     CDS             5850..6407
                     /locus_tag="VHN55_10735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804436.1"
                     /translation="MLGFKLKTYAYAAAIAAAPLSLSAAFAATPADVRPGMQVVDPSG
                     GNVGIVTGVKGDNLILKTHKHEVQLPMASFTASEGKLLFAMTAAELDAETEKALAEAN
                     AAVAVGAQVYGSDGSLAGEIDAIDESLVTVKLASGKTVRLPRSGVFGSPKGAVLGITT
                     AKLNDLASQASVSDAPAPESPGATQ"
     gene            6463..7209
                     /locus_tag="VHN55_10740"
     CDS             6463..7209
                     /locus_tag="VHN55_10740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019515241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX2804437.1"
                     /translation="MTDARIRIGIGGWTFPPWRGTFYPPDLPQRSELEFASRRFGAIE
                     INATFYGRQSQKSWQNWAESVPDGFQFAIKGSRYCVTRPRLSEGGEGLETYFAQGMAR
                     LGEKLGPILWTLASRRQFDAADIAGFFELLPRSVDGIPLRHAIEPRHESFRDERFYAL
                     CRKHDVAVVFGDDDEFPTIDAATASFAYARLQRMSENEPIGYSEVKLDEFAKLADRWA
                     AEGRDSYIFMINGAKVRAPAAALALQERLR"
     gene            7219..7929
                     /gene="dapB"
                     /locus_tag="VHN55_10745"
     CDS             7219..7929
                     /gene="dapB"
                     /locus_tag="VHN55_10745"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010410181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEX2804438.1"
                     /translation="MTAADKPIRITLFAPNGRMGKAIAQAAAENPGFAIDPDAGDVLV
                     DFSAPDALQSSLDRAVAGGVPILIGTTGLDESDDARIADASQKVAVLRAANTSLGVAV
                     LSDLVERAAQALGPEWDIEILDMHHRMKADSPSGTALALGEAVARGRGAPMQAESGRH
                     GTGLVRAEGAIGFASLRGGSAAGEHDVIFAGPSERLILSHRAENRMIFARGALAAARF
                     LAGKPPGLYSMRDVINSL"
     gene            7926..8618
                     /gene="nth"
                     /locus_tag="VHN55_10750"
     CDS             7926..8618
                     /gene="nth"
                     /locus_tag="VHN55_10750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEX2804439.1"
                     /translation="MKKDEVFEFFRRLAEDNPSPTTELEFTNPYTLLVAVVLSAQATD
                     ASVNAACRPLFVKVKTPEEMVELGEDSLRDQIKTIGLFNTKAKNVIALSKALIRDFGG
                     EVPRTREELQSLPGVGRKTANVVLNTAFGEETFAVDTHVFRVGNRTGLAPGKTPDEVE
                     AKLDRIVPGPFRRDAHHWLILHGRYVCKARTPECWRCPVIDLCRYKPKTPAPKTSDVR
                     SASPKSSTVRTG"
     gene            complement(8560..9588)
                     /gene="alr"
                     /locus_tag="VHN55_10755"
     CDS             complement(8560..9588)
                     /gene="alr"
                     /locus_tag="VHN55_10755"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009821601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX2804440.1"
                     /translation="MHRPLRLRLDRSALQHNFQWLEQRAGVPAGAAIKADGYGIGARE
                     TMRALYDAGCRTFFVSTYAEADELGPVPGDSSVVVLHGVGPQDVEAALATPSRPVLNS
                     VEQAQRWKQVAPDRSADVMIDTGMNRLGLRPEETAALESLDIDTLHSHLACADEDLPM
                     NGRQLAAFREVVAKVPAKRCAIANSAGICLGSDYSFDLVRPGLSLYGGIPRPEAKGNI
                     HQVARVEAQVVQRRVIPPGETCGYGATFTAASETQAAIVNIGYADGYLRGFSSRGSAF
                     VGEFALPVLGRVSMDLVALGCDSVPGLQEGDWVELDYDLPTASEASGLTQYELLTTLG
                     SRFERHWS"
BASE COUNT         1825 a         3189 c         3102 g         1598 t
ORIGIN      
        1 tagttcctcg aatgcctccc agccaagcgc gagggcggcg gagatcgaga cggtgctcca
       61 cagcgaatag cgtccgccga cgccttccga gaactgcaga atccggctct cgtcgattcc
      121 ggcttcgaca gcggcctcgg gcgaggccgt gacagcgatg actcggccgt aggggtcgga
      181 aaccccgcct tgcaccagcc aatcgagcga ggcagcaagg ttcgtcattg tctcggcggt
      241 ggtgaacgtc tttgaggcgg cgatcaccag cgtcgtcgcg gggtcgagcg gctcgatcgc
      301 ttcgcggaac gcattcgggt caatgttgga gagaaaccgt gtctgcaacc gccgaccgtc
      361 ctggcccagc gcgtcgacca gcaatttcgg tccgagcagc gagccgccga tgccgatgtg
      421 gagaattgcg ctgacgtcgc cgaacgcgcc cgcctcaatc gcatcgacga ccgcgcgaat
      481 cctcgaccgc cgcgacgccg cgagctgcac cgcggccgga ctgcccgacc cgcgctcggc
      541 gacatgctcg gcagggcgcc cctcggtgac gttaacgact tcgcccgcaa acagggcatc
      601 acgcgccgct tcgaaatcgc gcttctccga aagcttcgcg aaggcagcga tcaatggctc
      661 gtcaaggtgt gtcttcgacc aatcgaaata gatacccgcg acctcgtggg cgagccgttc
      721 cagccgatcg ggctcctcgg cgaagaggcg atcgagccgc ttgagctcat acgcgccgat
      781 ttcggtccac gggtcgttcg ccattgctgg gcctcatacc ggcggcgcgc gatattgcca
      841 tagcttgacg tttcgccgcc ggcccccgca caagcgattc aatgaagcga tcgccggccc
      901 taaaaaagca gagacgaccg ggcggcggga cgctccgctt catcctcatc gtcgccttgg
      961 tcgcctggat ggttcggagc atggtcttcg cgccgttcag catcccatcg gggtcgatgc
     1021 ttccgacgct tcacgtcggc gattatttga tcgtcgcgaa atggccgtac ggttactcgc
     1081 gctacagctt tccctttcag ttcccgcctt tggaagggcg catcttctcg agcctgccgg
     1141 agcgcggcga tgtcgtcgta ttcgtgacgc cggacaacaa ggaacaggat tacgtcaaac
     1201 gtctgatcgg gcttcccggc gacacgatcg aggttcgcaa cggccggctg gtcctcaacg
     1261 gccgttccgt gacgggaagc aggaccgagc gcatagccgc tgcggtttcg ccgaacagcc
     1321 cgtgccgcac gatcggcacg ccaaccatcg gtcgtaacgg gatgtgcctt cgtgccggct
     1381 atcgcgaaac gctcccgaac ggcgccagct accgggtgct cgaccaggtg agtggcggaa
     1441 tcggcgacaa ctatccagcg acgaaagtgc cggcagggta cgtgttcctg atgggcgaca
     1501 atcgcgacga cagcctcgac agccgcttct cgcccgccga gggcggaatc ggtttcgttc
     1561 cgctcgatca cctcgtcggc cgcgcgacca tggttttttg gtcgaccgac ggaagctcga
     1621 gctacgtcaa gccgtggacg tggttcagcg cgctcaggac cgagcgcctc ggcaaaagcc
     1681 tcgactccgg tgcacgatga acgatgacgt cgccaaattc gtgaccgaac ggctagcgta
     1741 cgagcccgca gacctggcct tgttcgagtc ggccctcacc cattcgagca gccgaggcga
     1801 caattacgag cggctcgagt ttctcggcga ccgcgttctc ggactggtga tggcccgctg
     1861 gctctacgag cgctttccga acgagcccga aggcaaattg tcgaagcggt tcaatacgct
     1921 cgtcgaccgg gtcacctgcg gcgacgtggg ccgcgagatc ggcctgccga acgtcatccg
     1981 cctcggcaag caggcacgcg acgaccgtgc caactggagc gacaatgtcc tcggcgacgt
     2041 agtcgaggcg ctgattggcg cggttttcct cgaacgaggc ctcgaggcag cggaagcgct
     2101 gatccggcgc ttgtgggggc cgctgatcga ggagcagcgg cgggtcccgc aacatcccaa
     2161 gtcggcgctc caggagctcg ccgccgcgcg cgacctcccc aaccccatgt acgaagttgt
     2221 gtcgaaaacc ggctcccacc atgcgccgcg cttcacagtg cgggcgtcca tcccgacgct
     2281 cggcgatgcc gaggcggagg gcacgagcaa gcaggaagcg gaaacccagg cggcgcaagc
     2341 attgttgtcg aagttgaaat gagggacgaa acgacacgcg ccggcttcgt tgccgtgatc
     2401 ggcgccccca atgcgggcaa gtcgaccctg gtcaatgcgc tcgtcgggca gaaggtcgcg
     2461 atcgtcagcg ccaaggcgca gaccacgcgg gcccggctga tgggaatcgc gatcgaaggc
     2521 ggcacgcaga tcctgcttgt cgatacgccc ggcattttcg agccgcggcg gcggctcgat
     2581 cgcgcgatgg tccaggcagc ctggacgggc gccgaggacg cggagctggt cctactggtg
     2641 atcgattcca aagccggcgc caccgctgaa gtcgagcggg cgattgccgg gctggagaag
     2701 cgtcgccacc cgttgttcat cgcgctcaac aagaccgacc tcgtcaagca gaaggaacag
     2761 cttctcgggc tttcgttaca gctcacgcag cggctcgatc ccgacaaggt gtttatgatc
     2821 agcgccgcgc agggggacgg agtccaggac ctgaagtcgg cactggcgca ggccatgccc
     2881 gaaggcccgt ggctctaccc cgaagatgag gtttcggacg cgaccgaccg gatgatcgcc
     2941 gccgaactga cccgcgagca gatctacgag cagctctacc aggagctgcc ctattcggcg
     3001 gcagtcgaga ccgagagctg ggaagaccgc ccggacggct cagcagcgat ccgtcagcag
     3061 atcctcgtcg aacgcgacag ccaaaagggg atcgtgatcg gaaaaggcgg ccggcggctc
     3121 aaggagatcg gcgaaaaggc gcggcaggcg atagcggagc atcttggccg cgacgttcac
     3181 ctgttccttc acgtcaaggt caatccaaaa tggggcgagg accgcggcct ctatcgcgaa
     3241 atcggcctgg aatgggcgga ctaggcttcg ccagctagca gctcttcgac ccactccggc
     3301 accaagtccc ccgcgcgacc gatccggctt tcgccaaaca ggaagctgcc gaggctcggt
     3361 tcgagattca tctccagagt ccgagcgcgg caatagcgag cggtttggac gaatccggcg
     3421 gccgggtaga cagcgcccga cgtcccgatc gagacgaaca gatcgcagcg atcaatggct
     3481 gcatcgattt cttccatgcg gtacggcatt tctccgaacc acacgatgtc gggccgcact
     3541 agtccgcttg tcccgcagct aggacatgcc gcgccctcgc ccatcggccc ggtccagccg
     3601 aagcgccggt cgcaacgcag gcaccagccc ttcgccagct ccccatgcat gtgaacgagc
     3661 cgcttcgagc ccgcgcgctc gtggaggtcg tcgacgttct gcgtgaccag cagcagctcg
     3721 cccggccact cccggtcgag ccgtgccagc gcctcgtgcg cggcattggg cgttacggcc
     3781 gaaagccttg ccctccgcgc atcgtagaag gcgtggacca gagccgggtc gcgagcgaag
     3841 ccctccggag tcgccacgtc ctcgacccgg tgcccctccc acagcccgtc ggggccgcgg
     3901 aacgtcgaaa ggccgctctc tgccgacaca ccggcgccgg tgaggatcac gatgttccta
     3961 acagcgtcgg tcattgcatg cgcttagcgg cgctcactgg cttgtgcgac tcgcccagcc
     4021 atgattgtct cgcctcagtc agggaggaca atatgcgctt agacattatc ccggccgcgc
     4081 ttgcggcgct gactttatcc gcttgctcag cggagccggc gaagacgaac acagaagcgg
     4141 tgaagcagca gattcttacg caggaagagg catggggtcg tgcctatgcg gcgcgcgacg
     4201 gcgaggcact tgccggcttc tacaccaacg atgcagcgct cgccgctccg ggggaacagc
     4261 ttgtacgcgg cagggacgca ctgcgtgaag cgacagccgg gatcgttaag gaccccaacc
     4321 tcagcatggt ctttcgcgcc aatcggatcg aggtcgccga ttccggcgac ctcgcttaca
     4381 cccgcggcca gttcatgatg acgatcacag acccggcgac aaagcggccg cagtccagcc
     4441 gcggctatta tctgacggtc tggcaaaagc aggcggacgg cagctggaaa gccgtcgaag
     4501 acttcgtcac accgggtcct gccctgcccg tccaggaacg cgcgacgatg atcctctgac
     4561 ctcgcgagct cgacgacaag gatcgcacct aagccagcga cggaaagacc ggggcctaac
     4621 gcggaagtat tcgccttact tacctgcctt cgctcggcgg ctctgctttt ccactagttc
     4681 ctcggccgcg gcctgcttct cgcgcgagcg gaatccgtcg agatgggcga tcacgaacgc
     4741 cgcgaaagga gtcgccacca gcgcgcccat gaagccgaat cccagcgcaa ggataaccag
     4801 cgacaggatg atgatgaacg ggtggatgtt catctgcgct ccgctcacct gcggtgtgac
     4861 gagatttccg agagcctcgt tcatcacgag gtagaacagc gccacccaca gcgccgtcat
     4921 cgggctcacg gtcaatgcga tcaacaccgg cggagtcgcc atgatgtagc cgcccagccg
     4981 tgggacgaat tcggagaaga aggcgagcgc cgcccagacg agcgcgccag ggatgtccat
     5041 cagcgacagg aacgttccga cgagcaccgc ttggatcgag ccgacaatcg cgttcgccct
     5101 catccagccc gcgaccatcg ccgaaaaccg gacgaagctg cgcattgcct tcggcctcag
     5161 cttgtcgctg tacaggctga agtaacggac cagcagcggc ttgggattga gcgtcaggta
     5221 gatgatcgat gcgaagaaga cgatgagggc ggccgcaatc tccagcacct tgaaagaggc
     5281 gccgacgccg ccgacgagca gccgcaccgc gtcgggagcg aggcccgaga gggcgtcgcc
     5341 atccagcctg actgcctctt gcaggtcggg gtagttgcgc aagctgtagg ccaaccgctt
     5401 cgatcccgag gttatcaggt ccggaaaacc gttgacgagg gccaccattt gattggcaat
     5461 cttcggcagg accatccagc acacggcgac gaccacggca aagaatgcga gcaggaccac
     5521 gagcgcggct gtgtgtcgcg tccagccgcg gcgctgcagc cgaagcaccg ggccgttgag
     5581 gccgatcgcg acaaacatcg caaggaacag gagcagcagc ccggacgcga cggtgtacag
     5641 gaaccagatc gccgcgagac cgatcggcac cgcgaacaac ttcaggaaca gatgctcgtc
     5701 ttgccccgcg cgccgctccg ccattcctaa tcctcgctgc cgtttcgctg ccctaacgaa
     5761 agcgacccga tttcagtgcc gtgaatttgc gttttctggg ctctttccga tagtatgcgc
     5821 tcgtaatcca catgggagac tcgctaacta tgcttggttt caagctgaag acctacgcct
     5881 acgcagcggc gatcgccgca gcgcctcttt ctcttagcgc ggccttcgcc gccacgccgg
     5941 cggacgtccg cccgggcatg caggtcgttg acccgagcgg cggaaatgtc ggaatcgtca
     6001 ccggcgtcaa gggcgacaat ctgatcctca agacgcacaa gcacgaagtc cagctgccga
     6061 tggcgtcgtt taccgcaagc gaaggcaagc tgctgttcgc gatgacggct gcggagctcg
     6121 atgccgaaac cgagaaggcg ttggccgaag ccaatgcggc ggtcgcggtc ggggcgcagg
     6181 tctatggcag cgacgggtcg ctcgccggag agatcgacgc gatcgacgaa tcgctagtca
     6241 ccgtcaagct ggccagcggc aagaccgtgc gcctgccgcg atcgggcgtt ttcggaagcc
     6301 ccaagggagc ggtgctcgga atcacgaccg ccaagctcaa cgacctcgca tcccaggcct
     6361 cggtgtcgga cgctccggcc cccgaatcac cgggagcgac gcagtaattt cccggccggt
     6421 ctcgacccgg gaccggccgg tacctgccga cattttgcgc acgtgaccga cgctcgaatc
     6481 cgtatcggga tcggcggttg gacgtttccg ccctggcgcg gaaccttcta tccgccggac
     6541 ctgccgcaac gcagcgaact cgagtttgca tcgcgccggt tcggcgcgat cgagatcaac
     6601 gcgaccttct acggccgcca gagccagaag agctggcaaa attgggcaga gtccgttccc
     6661 gacggtttcc agttcgcgat caagggctcg cgctattgcg tcacccgccc ccgactgtcg
     6721 gaaggcggcg aaggtctgga aacctatttc gcgcaaggaa tggcaaggct cggcgaaaag
     6781 ctgggcccga tcttgtggac gctcgcgtcg cgccggcagt tcgacgccgc cgacattgcc
     6841 ggatttttcg agctgctgcc gcgcagcgtg gatggaatcc cgcttcgcca cgcgatcgag
     6901 ccgcgccacg aaagcttccg cgacgagcgc ttctacgcgc tgtgccgcaa gcatgacgtg
     6961 gccgtggtct tcggcgacga cgatgaattt ccgaccatcg acgcggcgac ggcgagtttc
     7021 gcttatgcgc ggctccagcg catgagcgag aatgaaccca tcggctattc cgaggtgaag
     7081 ctcgacgaat tcgccaagct cgccgatcgc tgggccgccg agggccgcga ttcctacatc
     7141 ttcatgatca acggagcgaa agtccgtgcc cctgcggccg cgctggccct gcaggagcgg
     7201 cttcgctaat cagtgcgaat gaccgccgcc gacaagccaa ttcggatcac cttgttcgcg
     7261 cccaacggcc gaatgggcaa ggccatcgcg caggcggcgg ccgagaatcc aggtttcgcg
     7321 atcgacccgg atgcaggcga cgtcctagtc gacttttctg cccctgatgc actgcaatcg
     7381 agcctcgatc gcgccgtcgc cggcggggtt ccgatactga tcgggacgac aggactcgat
     7441 gaatcggacg acgcccgaat cgccgacgcg tcgcagaagg tggcggtcct ccgcgctgcg
     7501 aatacgtcgc tcggagtggc cgtcctttcc gatctcgttg agcgggccgc gcaagcgctc
     7561 gggcccgagt gggacatcga gatcctagac atgcaccatc gaatgaaggc tgactcgccc
     7621 tccggcaccg cgctggcgct aggcgaagcg gtggcgcggg gacgcggcgc tccgatgcag
     7681 gccgaaagcg gccgccacgg caccggcctt gtccgggcgg aaggcgcgat tggcttcgca
     7741 tcgctacgcg gcgggagcgc ggcgggcgag cacgacgtga tcttcgccgg gcctagtgag
     7801 cggctgatcc tttcgcaccg cgccgaaaat cggatgatct tcgctcgcgg agcgctcgcc
     7861 gcagcccgct tcctcgccgg caagccgccc gggctctatt cgatgcgcga cgtcatcaac
     7921 tccttgtgaa aaaggacgag gttttcgagt tcttccggcg gctggcggaa gacaatccat
     7981 cgccgacgac cgagctcgaa ttcaccaacc cctatacgct gctcgtcgcc gtcgtccttt
     8041 cggcgcaggc aaccgacgcc agcgtcaacg cggcgtgccg tccgcttttc gtcaaggtga
     8101 agacgccgga ggagatggtc gagctcggcg aggattcgct gcgcgaccag atcaagacga
     8161 tcggcctgtt caacaccaag gcgaagaacg tcatcgctct ctcgaaagca ttgatccgcg
     8221 acttcggggg cgaggtcccg cgaacccgcg aagagcttca atcgctgccg ggagtcggcc
     8281 gcaagaccgc caacgtggtc ctcaacacgg ccttcggcga ggagacgttc gcggtcgaca
     8341 cccacgtgtt ccgggtcggc aaccgaaccg ggctggcgcc gggaaagacg cccgatgaag
     8401 tggaagccaa gctcgaccgg atcgtccccg ggccgttccg acgcgacgcc catcattggc
     8461 tgatccttca cggccgctac gtctgcaagg cgcggacgcc cgaatgctgg cgttgtcccg
     8521 tgatcgacct ttgccgttac aagccgaaga cgccggctcc taagaccagt gacgttcgaa
     8581 gcgcgagccc aaagtcgtca acagttcgta ctgggtgagt cccgacgctt ccgaggcagt
     8641 cgggagatcg tagtcgagct cgacccagtc tccctcttgc aggcccggca ctgaatcgca
     8701 gccaagcgcg acgaggtcca tggacacccg gccgagcacg gggagggcga attcaccgac
     8761 aaaggcgctt ccgcgcgacg aaaagccacg caggtagcca tcggcgtacc caatgttgac
     8821 gatcgccgcc tgcgtttccg aagcggcggt aaaggtcgcg ccatagccgc aggtttcgcc
     8881 gggagggatt acccgccgct ggacgacctg cgcttcgacc cgcgcgacct gatggatgtt
     8941 gcccttggcc tccggtcgcg gaatgccgcc gtaaagggac agtcccggcc tcaccaggtc
     9001 gaagctgtag tcgctcccga ggcagatacc cgcggagttg gcgatggcgc agcgctttgc
     9061 cggcaccttc gcaacgacct cgcggaaggc ggccagttgc cggccgttca tcggcaagtc
     9121 ctcgtccgcg caggcgagat ggctgtggag cgtgtcgata tcgaggcttt cgagagcggc
     9181 cgtctcttcc ggcctaaggc cgagccggtt catcccggtg tcgatcatca cgtctgccga
     9241 ccggtcggga gcgacctgtt tccaccgctg ggcctgctcg acgctgttga gaacgggacg
     9301 cgacggtgtt gcgagcgcag cttcgacgtc ctgcggccct accccgtgga gcacgaccac
     9361 agatgagtct cctggaaccg gacccagctc gtctgcttcc gcgtaggtcg agacgaagaa
     9421 ggtgcggcag ccggcatcgt atagggcgcg catcgtctct cgggcgccaa tgccgtagcc
     9481 gtccgccttg atggccgccc cggcaggcac tccggcgcgc tgctcgagcc actggaaatt
     9541 gtgctggaga gcagagcggt cgagcctcag gcgaagcggt cggtgcatgg gggccgacta
     9601 gccgccgcgg gtgcccgcgt cgaggcgcgc cttggcctgg ttccagttgc gtccgtcgaa
     9661 ctgctcgatc gcaagctgga ccggctcatc gaggcaattg gcgttcacgc tcca
//
LOCUS       DATAKH010000252         7678 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_14688,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000252 DATAKH010000000
VERSION     DATAKH010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7678
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14688"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VHN55_10760"
     CDS             <1..380
                     /locus_tag="VHN55_10760"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX2804441.1"
                     /translation="AGYCFGGMCALDIARSGARIAAAASFHGLFDPCGLPAEKINAKV
                     VAFHGWDDPMVPPEMVVALGKELTEAGADWQIHAYGHVAHGFTNPNAHEIGIEGVRYN
                     ALAAERAWTSFISLLEELFGGDA"
     gene            373..2421
                     /gene="ligA"
                     /locus_tag="VHN55_10765"
     CDS             373..2421
                     /gene="ligA"
                     /locus_tag="VHN55_10765"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEX2804442.1"
                     /translation="MPEHGATDLTEAEAANRLMRLAKEIARHDKLYHDRDSPEVTDAE
                     YDSLVRENRELEERFPHLVRADSPSKRLGSAPTGALAKVTHARPMLSLENAFSAEEVE
                     EFVARVKRFLSLPESAAVPVTAEPKIDGLSCSLRYEKGALVLGATRGDGTVGEDVTAN
                     VRTIADIPQRIDGAPDVLEVRGEVYMSKADFEALNARQQASGGKIFANPRNSAAGSLR
                     QKDSAVTASRPLRFFAHGWGELSEPLAETQFDAMKRVEGFGFPVPDLLIPCGSVEEML
                     AHYRAIEKARADLPFDIDGVVYKVDRLDWQQRLGQVARAPRWALAHKFPAERAETTLE
                     AIDIQVGRTGKLTPVGRLTPVGVGGVIVANVTLHNRDEIARLGVRPGDRVLIQRAGDV
                     IPQVIDNLTRDEPRPPYDFPDHCPECGSEAVAEEGEVDVRCTGGLICPAQRFERLRHF
                     VSRGALDIEGLGEKSIAEFIALGWLNSPADIFRLRNHGEELAGREGWKEKSVDNLLAA
                     IEAKREPNPARLLFGLGIRHVGIVTAKDLLRCFGTIEELRRVAVSEAASDELSGVEGV
                     GPVVAEALVDFFHEQHNREALDDLLSEVSPKAFASEAKQTEWSGKTIVFTGSLETMSR
                     DEAKAQAERLGARAAGSVSAKTDLVVAGPGAGSKLKKAEELGVRVIGEAEWARIVADS
                     "
     gene            2434..3399
                     /locus_tag="VHN55_10770"
     CDS             2434..3399
                     /locus_tag="VHN55_10770"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2804443.1"
                     /translation="MSVILAALGMAAAQAPPPPPIIDMHMHAMAADAQGPPPLAMCTP
                     FGEFPAWDQRNSYGDQLMHRFKQPTCKDPIWSSKSDDALMRETLAVMERRNIRAVLSG
                     PADKVATWRKAAPDRFWPALTLSLQDKVAPEELERMHSAGDLDVLGEVITQYDGIEPN
                     DPRMEPYWALAERLDIPVQIHVGPGPPGVIYIGASGYRARMHSALSMEEVLVRHPKLR
                     VYLAHAGYPLIDDLLTLMYAHPQVYVDTGVIIFTQPRAAFYRYLQRIVEAGFGKRVMF
                     GSDQMVWPGVIERSIGVIEDAPFLTPEQKRDILYNNAARFLRLEH"
     gene            complement(3406..3750)
                     /locus_tag="VHN55_10775"
     CDS             complement(3406..3750)
                     /locus_tag="VHN55_10775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804444.1"
                     /translation="MPRLIFWIACVIAFVMAVLPQPPQVPGGLSDKVQHVIAFLFLAA
                     LGWWAYPDVKKRYLLLGLAAFGAVIEIVQALPAVGRDGDPIDWVVDVIAALTVFVIVA
                     LWGFGRARRSRV"
     gene            complement(3789..4664)
                     /locus_tag="VHN55_10780"
     CDS             complement(3789..4664)
                     /locus_tag="VHN55_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019831112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX2804445.1"
                     /translation="MSWRVTVACTRAQAEAVPETDIIFRDSSPPVLVADEPDPAKPDD
                     WLLHAYFEREPDEEDLDRLRRLGSGEPQVEQLGEADWVTMSQSGLQPIRAGRFYVHTP
                     TTRSRPTGTIAFEIDAGLAFGTGQHATTAGCLEALDRLESEGVCFANIADVGTGTGLL
                     AFAALALWPQARCIATDIDPVAVEVARENAAINEVKLGHGAGELLLAEADGMRSPMLA
                     ARAPFDLIVANILAGPLIELASGFAQALAQGGTVVLAGLLDSQVADVIRAYEGLGMTP
                     ANRGSGEWPVLVLRS"
     gene            complement(4661..5365)
                     /locus_tag="VHN55_10785"
     CDS             complement(4661..5365)
                     /locus_tag="VHN55_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX2804446.1"
                     /translation="MNILVTGASRGIGAATYQLLKSRGHKVTGHSSRGSEELIAGDLM
                     DPQAPRRIWDFALDRLGGRIDVLVNNAGIYEGVAEDGSDGDWHAAWDRTNRINLQSAA
                     DLCRLAVLHFRERDGGGRIVNVASRAASRGDSPQHWHYAASKGAMVAMTKSIARAYAS
                     EGILAFAVSPGFTVSEMTEEYLAGRGGAAIVADIPLGRVATTNEIAETIRWLATEAPA
                     SATGTNIDVNGASYVR"
     gene            complement(5403..6692)
                     /locus_tag="VHN55_10790"
     CDS             complement(5403..6692)
                     /locus_tag="VHN55_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016745262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX2804447.1"
                     /translation="MKSDTAHLQRLSDKQVSERLAAYNPDGSLERDIHILRESAMDIV
                     AEEIIAHFGAERAERFANNYAGKVDSAWVQAVAEYGREIYSNKLSVPEYMAKRSEAAS
                     RITARMVERFSRDPAKLQECVSGLLRIGQFETDIILAQVALLEAIEAADARGNQSDEF
                     ERRVADLVRGSTEESRNLSERTRATAASARGMLGKTSEVAAAAEQSAVAMREAAQTAA
                     GLIRAIEDARTEVEVAADVATRAGSQAEQAVQVSQALSSHVEAIESILSLIRDIAGQT
                     NLLALNATIEAARAGDAGRGFAVVAQEVKSLASQTARATDDITAKITAIQQATKQTVD
                     ANGSIQSTVEEVQTSADRIREAMELQAQTVTMITAAVDETALAADSMSSTIAAIRSDT
                     ENVAKDIDEVEKGFGRFSEQITDFTSTTKEFVAGIAA"
     gene            6900..7352
                     /gene="sdhC"
                     /locus_tag="VHN55_10795"
     CDS             6900..7352
                     /gene="sdhC"
                     /locus_tag="VHN55_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018075359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEX2804448.1"
                     /translation="MAAARERPLSPHLTIWRWGPHMVVSILHRITGAALSIVGLAIMV
                     WWLMAIAGSPEAYASFTHRVWGDLGDLNWNGLRAIAGSLAKIFLKLALFGLTWAFFQH
                     LFSGIRHLIMDSGMGFELRANKAGAIATIIGSLAATALIWAYWLGAFE"
     gene            7349..>7678
                     /gene="sdhD"
                     /locus_tag="VHN55_10800"
     CDS             7349..>7678
                     /gene="sdhD"
                     /locus_tag="VHN55_10800"
                     /inference="COORDINATES: protein motif:HMM:TIGR02968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEX2804449.1"
                     /translation="MSIGESATELGKVRGLGSARAGGVGWLGERISSVALLLLGAWFV
                     ASLLFLPKLDQRTLAEWLRSPAGAVPMALFVITSCWHSVDGLKQVVDDYVEGEVGRWF
                     INTLVLFL"
BASE COUNT         1304 a         2463 c         2576 g         1335 t
ORIGIN      
        1 ccgccggata ttgcttcggc ggaatgtgcg cgctcgacat cgctcgaagc ggagcgagga
       61 tcgccgccgc ggccagcttc cacgggctgt tcgatccctg cgggcttcct gccgagaaga
      121 tcaatgcgaa ggtcgttgcc tttcacggct gggacgaccc gatggtgccg ccggagatgg
      181 tcgtcgctct cggaaaggaa ctgacggagg cgggcgcgga ctggcaaatc cacgcctacg
      241 gccatgtggc acacggtttc accaatccca atgcgcacga gatcgggatc gaaggcgttc
      301 gctataacgc cctcgcggcc gagcgcgctt ggaccagctt tatcagcctg ctcgaggaat
      361 tgttcggcgg agatgcctga acatggggcc actgacctga ccgaggccga ggccgctaac
      421 cggctaatgc ggctggcgaa agaaatcgct cgccacgaca agctctacca cgaccgcgat
      481 tcgcccgagg tcactgacgc cgaatatgac tcgctggtcc gcgaaaatcg cgagctggag
      541 gagcgattcc ctcacctcgt ccgggcagat tcgccttcga agcggctcgg ctcggcgccg
      601 acgggagccc ttgcgaaagt cacgcacgcg cggccgatgc tcagcctcga aaatgccttt
      661 tcagccgagg aggtggagga gttcgtagcg cgggtgaagc ggttcctgag cctgccggaa
      721 agcgcggccg tgcccgtcac cgccgagccg aagatcgacg gtctgtcctg ctcgcttcgc
      781 tacgagaagg gcgcgctggt gctgggggcg acccgcgggg acgggacggt cggagaggac
      841 gtcacggcga acgtgcgtac gatcgccgac atcccgcagc gtatagacgg cgctccagac
      901 gtgctcgagg tgcggggcga ggtctatatg tccaaggccg acttcgaggc cttgaacgcc
      961 cggcagcagg cgagcggtgg caagatcttc gccaacccgc gcaattcggc ggccggatcg
     1021 ctccgccaga aggattcggc cgtaaccgcc tcccgcccgc ttcgcttctt tgcccacggc
     1081 tggggcgaac tgtcggagcc gttggcggag actcaattcg acgcgatgaa gcgcgtcgag
     1141 gggttcggct ttccagtgcc tgacctgctg atcccgtgcg gaagcgtcga ggagatgctc
     1201 gcccattacc gagcgatcga aaaggcgcgc gccgacttgc cgttcgacat cgacggagtc
     1261 gtctacaagg tcgaccgcct cgactggcaa cagcggctgg ggcaggtggc gcgcgccccg
     1321 cgctgggcgc tggcgcacaa gttcccggcg gaacgggcgg aaacgacgct ggaggcgatc
     1381 gatatccagg ttggccgcac cggcaagctc actccggtgg ggcggctaac tccagtcggg
     1441 gtcggcggag tgatcgtagc gaacgtcaca ctccacaatc gagacgagat cgcgcggctc
     1501 ggagtccggc ccggcgaccg cgtgcttatc cagcgtgccg gcgatgtcat cccgcaagtc
     1561 attgacaacc tgacccgcga tgagccgcgg ccgccgtacg acttccccga ccattgtccc
     1621 gaatgcggca gcgaggcggt tgccgaggag ggcgaagtcg acgtccgctg caccggcggc
     1681 ctgatttgcc cggcgcagcg gttcgagcgc ttacggcact tcgtcagcag gggcgcactc
     1741 gacatcgaag gcctcggaga gaagtcgatc gccgagttca tcgctcttgg ctggctcaac
     1801 tcgcccgccg acatcttccg gcttcgcaat catggagagg agctcgccgg ccgcgagggc
     1861 tggaaggaaa agtcggtcga caacctgctt gcagccatcg aggcgaagcg tgagccgaac
     1921 ccggcgcggc tcctgttcgg ccttggcatc cgccacgtcg gaatcgtcac cgccaaggac
     1981 ctgctgaggt gcttcggcac gatcgaggag cttcggcggg tcgccgtttc cgaagccgca
     2041 tccgacgagc tttcgggcgt cgaaggtgtt gggccggtcg tcgccgaggc gctcgtcgat
     2101 ttcttccacg agcagcacaa ccgcgaagcc ctcgacgacc ttctgtcgga agtttcgccg
     2161 aaggcctttg ccagcgaagc gaagcaaacc gagtggagcg gcaagaccat cgtcttcacc
     2221 ggcagcctcg agacgatgag ccgcgacgag gccaaggccc aggcggagcg gctcggtgcc
     2281 cgagcggcgg gatcggtcag cgccaagacc gacctggtcg tcgccgggcc cggcgccggg
     2341 tcgaagctca agaaggccga ggagcttggt gtgcgggtga ttggcgaggc ggaatgggct
     2401 aggatcgtcg ccgacagctg agaggggatt tcaatgtccg tcattctggc cgctcttggg
     2461 atggccgccg cccaagcgcc accgccacct ccgatcatcg atatgcacat gcacgcaatg
     2521 gcagcggacg ctcagggtcc accgccgctg gccatgtgca cgcccttcgg ggaatttccg
     2581 gcttgggacc agcgcaattc ctatggcgat caacttatgc atcgcttcaa gcagccgaca
     2641 tgcaaggacc cgatctggtc gtcgaagagc gacgacgcgc tgatgcgcga aacgctcgcg
     2701 gtgatggagc gccggaacat tcgcgcggtc ctttccgggc ctgctgacaa ggtggctacc
     2761 tggcgaaagg cagctcccga tcgcttctgg ccggcgctga cgctttcgct gcaggacaag
     2821 gtcgctcccg aggagcttga gcggatgcac tccgcgggcg atctcgacgt cctcggcgaa
     2881 gtgataaccc aatatgacgg tatcgagccg aacgacccgc gcatggagcc ctattgggcg
     2941 cttgcggaac ggctcgatat ccctgtgcaa atccatgtcg gtcccgggcc gccgggagtg
     3001 atctatattg gggcgagcgg ataccgcgcc cgaatgcaca gcgctctcag catggaggaa
     3061 gttctcgttc gccaccccaa gctcagggtg tacctggcgc atgcaggcta tccactgatc
     3121 gacgacctgc ttacgctgat gtacgcccat ccgcaggtct atgtggacac cggcgtaatc
     3181 atcttcacgc agccgcgagc cgccttttac cgctacctcc agcgaatagt cgaggcgggc
     3241 ttcggaaagc gcgtgatgtt cggatccgac caaatggtgt ggccgggcgt gatcgagcgt
     3301 tcgatcgggg tgatcgagga cgcgcccttc cttacgccag agcagaagcg cgatatcctc
     3361 tacaacaatg cggcgcgctt cctcaggcta gagcactgac ggagcttaga ccctgctccg
     3421 gcgtgcgcgc ccgaaccccc acagtgcgac gatcacgaac accgtcagtg cggctatcac
     3481 gtcgacgacc cagtcgatcg gatcgccgtc gcggcctacc gccggaagcg cctgcacgat
     3541 ctcgatgacc gctccgaagg ccgcaagccc caagaggagg tatcgcttct tgacgtcggg
     3601 gtaagcccac catccaagag cggccagaaa caggaacgcg atgacgtgct ggaccttgtc
     3661 cgacaatcct cccggcacct gcgggggctg cggcaacacg gccattacga aggcaataac
     3721 gcaggcgatc cagaagataa gtcggggcat gccagcctga ttgcagcagg ccctgccgct
     3781 ggcaaggctt aggagcgaag aaccagcacc ggccattcgc ccgagccacg gttggccgga
     3841 gtcatgccga gcccctcata ggcgcggatg acgtcggcga cctggctgtc cagcaaaccc
     3901 gcaaggacca cggtccctcc ctgtgcgagg gcttgggcga agccggatgc gagctcgatc
     3961 agcgggccgg cgaggatgtt ggcgacgatc aggtcgaatg gcgcccgcgc cgccagcatc
     4021 ggcgagcgca tgccgtcggc ctcggcgagc agcagctccc cggccccgtg gccgagcttt
     4081 acctcgttga tcgccgcatt ctctcgagcg acctcgaccg ctaccggatc gatgtcggtg
     4141 gcgatgcacc tggcttgcgg ccaaagcgcc agcgcggcga aggcgagaag gccggtgccg
     4201 gtgccgacgt cggcgatgtt ggcgaagcag acgccctcgc tttcgaggcg gtcaagggcc
     4261 tcgagacagc ccgcggtcgt cgcatgctgg ccggtgccga aggcgagccc ggcatcgatc
     4321 tcgaacgcga tcgttcctgt cgggcgcgag cgagtggtcg gcgtgtggac gtaaaatcgg
     4381 ccggcgcgga tcggctgcag ccccgactgg ctcatcgtca cccagtcggc ctcgccgagc
     4441 tgctcgacct gcggctcgcc gctgccgagc cgccggagcc ggtcgagatc ctcctcgtcc
     4501 ggttcgcgct cgaaataggc gtggagcagc caatcgtccg gcttcgccgg gtccggctcg
     4561 tcggcgacaa gcaccggcgg cgacgagtca cggaagatga tatcggtctc gggcacggcc
     4621 tccgcctgag cgcgagtgca ggcgacggtg acccgccagc tcatctgacg tagctggcgc
     4681 cgttgacatc gatgttcgtc ccggtggcgg acgccggtgc ctcggtcgca agccagcgga
     4741 tggtctcggc gatttcgttg gtcgtcgcca cgcgtccgag cgggatgtcg gcgacgattg
     4801 cggcgccgcc gcggccggcg agatattcct ccgtcatttc cgaaacggtg aagccggggg
     4861 acacggcgaa ggcgagaatc ccctcggacg cataggctcg agcgatgctc ttggtcatcg
     4921 cgaccatcgc gcccttggac gcggcataat gccagtgctg cgggctatcg ccgcgcgacg
     4981 ccgcgcggct ggcgacgttg acaatgcggc cgccaccgtc gcgttcgcga aaatgaagca
     5041 ccgcgaggcg gcacaggtcg gccgcggatt gcaggttgat ccgattggtc cgatcccagg
     5101 ctgcgtgcca atcgccgtcg gacccatcct cggccacgcc ctcgtaaatc ccggcattgt
     5161 tgacgagcac atcgatgcgg ccgcccaggc gatcgagggc gaagtcccaa atccggcgag
     5221 gcgcctgcgg atccatgagg tcgccggcga tcagctcttc gctcccgcgg ctagaatggc
     5281 ccgtaacctt atggccccgc gatttgagga gttgataggt tgccgcgccg atcccgcggc
     5341 tcgctccagt aacgaggatg ttcatgagcg cggacttagc cgcgctcacg cgatgcggaa
     5401 agtcaggccg cgatgccggc gacgaattcc ttggtcgtcg acgtgaagtc ggtgatctgc
     5461 tcggagaagc ggccgaaacc cttctcgacc tcgtcgatgt ccttggcgac attctcggtg
     5521 tcgctgcgga tggcggcgat cgtcgagctc atcgaatcgg cggcgagcgc ggtttcgtcg
     5581 acggcggccg tgatcatcgt cacggtctgc gcctggagct ccatggcttc gcggatccgg
     5641 tcggcggagg tctggacctc ctcaacggtg gactggatcg aaccgttggc atcgacagtc
     5701 tgcttggtcg cctgctggat ggcggtgatc ttggcggtga tgtcgtcggt tgcccgcgcc
     5761 gtttgcgagg cgaggctctt cacttcctgc gcgacgaccg caaagccgcg gcccgcatcg
     5821 ccggcgcgcg ccgcttcgat ggtggcgttg agggcgagaa gattggtctg gccggcaatg
     5881 tcgcggatga ggctgaggat cgattcgatt gcctcgacgt gcgaggaaag cgcctggctg
     5941 acctgtaccg cctgctccgc ctggctgccg gcgcgggtgg cgacgtcggc tgcgacttcg
     6001 acttcggtac gagcgtcctc gatcgcgcgg atgagtccgg cggccgtctg ggcggcttcg
     6061 cgcatcgcca ccgccgactg ctccgccgcc gcagcgactt cgctggtctt gccgagcatt
     6121 ccgcgggccg aagcggcggt agcccgagtg cgctcggaaa ggttccgcga ttcctccgtg
     6181 ctcccgcgca cgaggtcggc gacccggcgc tcgaactcgt cgctctggtt gccgcgagca
     6241 tccgcggctt cgatcgcttc gagaagcgcg acctgggcaa gaataatgtc ggtttcgaac
     6301 tggccgatcc gaagcagtcc ggagacgcac tcctggagtt tcgccggatc acgcgagaag
     6361 cgctcgacca tgcgtgcggt gatccggcta gcggcttccg atcgcttggc catatattcc
     6421 ggcacggaga gcttgttgct gtagatttcg cggccgtatt cggcgaccgc ctggacccac
     6481 gcggaatcga ccttgcctgc atagttgttg gcgaagcgct ctgcccgctc tgccccgaaa
     6541 tgggcgatga tttcctcggc aacgatgtcc atcgccgatt cccggagaat atggatgtcc
     6601 cgttccagcg acccgtcggg attgtaggcg gcaaggcgct cgctcacctg cttgtcgctc
     6661 agccgctgca gatgcgcagt gtcgctcttc atcgcttcgt cgctccgtac gttcctgacc
     6721 caccgctgag gcacgaatgc cccccgctgg tagcgctctt gcgccagcaa tggttaaagg
     6781 cgggttagga gcagcgagta tcgccgccgc agccttgcgc gggtgctggc gccgccttaa
     6841 gcgggcatcg gccgaagcac ccggccggac cgtatttttc gaagggaagc gggaagcaaa
     6901 tggcagccgc tcgagaaagg cctctgtcgc ctcacctgac aatctggcgc tgggggccgc
     6961 acatggtggt gtcgatcctc caccgcataa ccggcgcggc cttgtcgatc gtcggcctgg
     7021 cgatcatggt gtggtggctc atggcgattg ccgggagccc cgaagcctat gcgagcttca
     7081 cccaccgcgt atggggcgat ctgggcgacc tcaactggaa cggcctgcgg gcgatcgccg
     7141 gatcgcttgc caagatcttc ctgaaactgg cgctattcgg tctcacctgg gccttctttc
     7201 agcacctgtt ctccggaatc cgccacctga tcatggacag cgggatggga ttcgagctca
     7261 gggccaacaa ggccggggcg atcgcgacga tcatcggctc gctggccgcg acggcgctga
     7321 tctgggccta ttggctggga gcgttcgaat gagcataggc gagagcgcga cggagctcgg
     7381 caaggtccgc gggctcggct ccgcccgggc cggcggggtc ggctggctcg gcgagcgaat
     7441 ctcgagcgtc gctctgctgc tgctcggcgc ctggttcgtc gcctcgctgc tgttccttcc
     7501 caagctcgac cagcggacgc tcgccgaatg gctgaggagc ccggcaggag cggttccgat
     7561 ggcgctgttc gtcatcacca gctgctggca ttcggtggac gggctgaagc aggtcgtcga
     7621 cgattatgtc gaaggcgaag tcgggcgctg gttcatcaac acgctggttc tcttcctt
//
LOCUS       DATAKH010000253         3601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_6463,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000253 DATAKH010000000
VERSION     DATAKH010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3601
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6463"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VHN55_10805"
     CDS             complement(<1..737)
                     /locus_tag="VHN55_10805"
                     /inference="COORDINATES: protein motif:HMM:NF015247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008767 - UDP-galactopyranose mutase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HEX2804450.1"
                     /translation="MNAAFGALEGRKPYDYLVVGAGFAGSVISERLASQHGARVLLID
                     RRPHVGGNAYDEKDGAGILYHKYGPHIFHTNSDMVVEYLSQFTKWRPYEHRVRACVRD
                     KLVPIPINRTTLNKLFGLDLQTDEEAAEYLASRAEPVDDIQTSEDVVINAVGRELYEL
                     FFQCYTRKQWGLDPSELDKSVTARVPTRTNLDDRYFTDSFQAMPADGYTAMFDAMLRQ
                     PGVTVETGVDFEDVRGDVAFDQLIFTGP"
     gene            complement(734..1816)
                     /locus_tag="VHN55_10810"
     CDS             complement(734..1816)
                     /locus_tag="VHN55_10810"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX2804451.1"
                     /translation="MSRFADEMTVIYWEEPVEIDERERPLLRVRAAEDYPNVRIVVPH
                     LPKGLDEDQRTAALKRLLDAYAAGLSRPIVAWYYTPMMLPFSRDLDAGVVVFDAMDEL
                     SKFKFAPQNLLDLEQELIDRADLVFTGGSSLFEAKKDRHDSVHLFPSSVDRTHFAKAR
                     VQQFEPADQEDLRRPRLGFYGVIDERFDIDLLDKVASMRPDWSFVMVGPVVKIAVEDL
                     PKRPNIHYLGAKKYEQLPRYLSGWDVALMPFAMNDSTQFISPTKTPEYLAGGKPVVST
                     PVRDVVRHYGHLQGVEIASTPEEFVAACERMLRLERDGEWLAEADLLLSATSWSITQA
                     RMSGLIADRLGERERMESSALLVAAE"
     gene            2147..>3601
                     /locus_tag="VHN55_10815"
     CDS             2147..>3601
                     /locus_tag="VHN55_10815"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010214961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEX2804452.1"
                     /translation="MATTIEELEKRRELAKLGGGEKRIAAQHAKGRLTARERLSVLLD
                     PGSFEEYDMFVEHNCSDFGMEAQKIPGDGVVTGSGTINGRLVYVFAQDFTVFGGSLSE
                     RHAEKICKVMDMAMKVGAPVIGLNDSGGARIQEGVASLGGYAEVFQRNVLASGVIPQL
                     SLIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEVVTQEELGGAVTHT
                     TKSGVADVAFENDIDALLATREFFDFLPLSNRHDIPVRPTDDPWDRHEDSLDTLIPPS
                     ANQPYDMHELIRKVADEGDFFEIQPNHAANIIVGFCRIEGRTVGVVANQPMVLAGVLD
                     INSAKKGARFVRFCDAFEIPILTFVDVPGFLPGVGQEHHGIIKHGAKLLFAYAEATVP
                     KITVITRKAYGGAYDVMASKHLRGDLNYAWPTAEIAVMGAKGAVEIIFRGKTPEEIAE
                     HTREYEERFANPFVAASKGFIDEVIMPHSTRRRVA"
BASE COUNT          675 a         1125 c         1153 g          648 t
ORIGIN      
        1 ggacccgtga agatcagctg atcgaaggcg acgtcgccgc gaacgtcctc gaaatccacg
       61 ccggtctcca cggtgacgcc cggttgccgc aacatggcgt cgaacatcgc ggtgtagccg
      121 tccgccggca tggcctggaa gctgtcggtg aaatagcggt catcgagatt ggtgcgggtc
      181 ggcacccggg cggtcaccga cttgtcgagc tcggagggat cgagccccca ttgcttgcgg
      241 gtgtagcatt gaaagaacag ctcgtagagc tcgcgcccga cggcgttgat aacgacgtcc
      301 tctgaggtct ggatgtcgtc gaccggctcc gcgcgcgatg cgagatattc ggccgcctcc
      361 tcgtcagtct ggaggtcgag gccgaacagc ttgttcaggg tcgtccggtt tatcgggatc
      421 ggcaccagct tgtcgcggac gcaggcgcga acccggtgct cgtacggccg ccacttggtg
      481 aattgcgaca gatactcgac caccatgtcg ctgttggtgt ggaagatgtg cgggccgtat
      541 ttgtggtaga ggattccggc cccgtccttc tcgtcatagg cgttgccgcc gacgtgcggc
      601 cgccggtcga tcagcagcac ccgcgcgcca tgctggctgg ccagccgctc ggagatcacc
      661 gagcctgcga agccagcccc gactacgaga tagtcgtagg gttttcgccc ctcgagggcg
      721 ccgaaggccg cgttcattcc gcggccacca gaagcgcgga cgactccatc cgctctctct
      781 cgccgagacg atcggcaatg agcccggaca tgcgcgcttg cgtaatgctc cagctggtcg
      841 cggaaaggag gaggtcggcc tcggcgagcc actcgccgtc gcgctcgagg cgaagcatcc
      901 gctcgcaagc ggctacgaat tcttcgggcg ttgacgcgat ctcaacgccc tgaagatgcc
      961 catagtggcg aacgacgtcg cgcaccgggg tcgaaaccac tggcttgccg ccggcgagat
     1021 attccggggt cttggtcggc gaaatgaact gggtggaatc gttcatcgcg aagggcatca
     1081 aggccacgtc ccagcccgac agatagcgcg gcaattgttc gtatttcttc gcgccgagat
     1141 agtggatgtt cggccgcttc ggcaggtcct cgaccgcgat cttgaccaca gggccgacca
     1201 tcacgaatga ccagtcggga cgcatcgaag cgaccttgtc gagaaggtcg atgtcgaagc
     1261 gctcgtcgat gactccgtag aatcccaggc gcgggcgtcg caggtcctcc tggtcggcgg
     1321 gctcgaactg ctgcacccgg gccttggcga aatgggttcg gtccaccgac gaggggaaga
     1381 ggtggacgct gtcgtgcctg tccttcttcg cttcgaacag gctcgatccg ccggtgaaga
     1441 cgaggtcggc gcggtcgatc agctcctgct cgagatcgag caggttctgc ggtgcgaact
     1501 tgaacttcga cagctcgtcc atcgcgtcga acaccacaac gccagcgtcg agatcgcgcg
     1561 agaacggcag catcatcggc gtgtaatacc aggcaacgat gggccggctc agtccggccg
     1621 cataagcgtc aaggaggcgc ttgagcgcgg cggtgcgctg atcctcgtct agccccttgg
     1681 gaagatgggg aacgacgatc cggacgttgg gataatcttc ggccgcgcga acgcgcagaa
     1741 gcggcctctc cctttcgtcg atctctaccg gctcttccca gtatatcacc gtcatctcgt
     1801 ccgcgaagcg gctcatcagc tgctgaggac gctggaagac aaaatcccac cgcaagtgcg
     1861 aaaagcacag caaagttgga cggccatcgt ccggcgccga gggctcggct gcagactcaa
     1921 caggcacccc gacgcgagtc atcattttgc ggttcactcc ttcgagaatt tcgatgtgga
     1981 attcttgtgc tatcaacggg ccgggagcga ccacagttcc gctgcactta cctcgatcaa
     2041 gaattttccg gtcttgtgca gtgcaacacc agccggtccg ccgattgacc gcccgcccgc
     2101 cgccgtggaa ggacgctcca gactcgcggt ccgcagaggg aaagtaatgg caacgacgat
     2161 cgaggagctg gagaaacggc gggagctggc gaagctcggc ggcggcgaaa aacgtattgc
     2221 ggcgcagcat gcgaagggcc gcctgaccgc tcgcgagcgc ctgtcggtgc tgctcgatcc
     2281 cggcagcttc gaagaatatg acatgttcgt cgagcacaat tgctccgact tcgggatgga
     2341 ggcgcagaag atcccgggcg acggggtcgt caccggctcg ggcacgatca acgggcgcct
     2401 tgtctatgtc ttcgcccagg acttcaccgt cttcggcggc tcgctgtcgg agcgccatgc
     2461 ggagaagatc tgcaaggtga tggacatggc gatgaaggtc ggcgctccag tcatcggctt
     2521 gaacgattcg ggcggcgcgc gaatccagga aggcgtcgcg tctctcggcg ggtatgcaga
     2581 agtgttccag cgcaacgtgc tcgcgagcgg agtcatcccg cagctgagcc tgatcatggg
     2641 gccgtgcgcg ggcggcgcgg tttattcgcc ggcgatgacc gacttcatct tcatggtgaa
     2701 ggattcctcc tacatgttcg tcaccggccc cgacgtggtg aagacggtga ccaacgaggt
     2761 cgtgactcag gaggagcttg gcggcgctgt gacccacaca accaagtcgg gagtcgccga
     2821 cgtcgcgttc gaaaacgaca tcgacgcgct tctcgcgacc cgcgagttct tcgatttcct
     2881 gcccctgtcg aaccgccacg acatcccggt tcgcccgacc gacgacccgt gggaccggca
     2941 cgaggacagc ctcgacacgc tcatcccgcc cagcgctaac cagccgtacg acatgcacga
     3001 gctgatccgg aaggtcgccg acgagggcga ctttttcgag attcagccga accatgcggc
     3061 caacatcatc gtcggcttct gccggatcga aggccgcacc gtcggggtcg tcgccaacca
     3121 gccgatggtg cttgccgggg tcctcgacat caattcggcg aagaagggcg cgcgcttcgt
     3181 tcgcttctgc gacgcgttcg aaatcccgat cctgaccttc gtcgacgttc ccggattctt
     3241 gcccggagtc gggcaggagc atcatgggat catcaagcac ggcgccaagc tgctgttcgc
     3301 ttatgccgag gcgaccgttc caaagatcac cgtcatcacc cgcaaggcct atggcggggc
     3361 ctatgacgtg atggcgtcaa agcacctccg cggcgacctg aactacgcct ggccgaccgc
     3421 cgagatcgcg gtgatgggcg ccaagggcgc ggtcgagatc atcttccgcg gcaagactcc
     3481 cgaggaaatc gccgagcata cccgcgaata tgaagagcgc ttcgccaacc cgttcgtcgc
     3541 cgcgagcaag ggcttcatcg acgaggtcat catgccccat tcgacgcgtc ggcgggtggc
     3601 g
//
LOCUS       DATAKH010000254         3673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_14833,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000254 DATAKH010000000
VERSION     DATAKH010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14833"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VHN55_10820"
     CDS             <1..297
                     /locus_tag="VHN55_10820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804453.1"
                     /translation="TPLIASVVKAVVLVVESGRTRTSAAVDAIHRLMAAGGNILGVTL
                     TKSRSQSSGYGYGYGYGYGYGYGYGYGKYGYGKGRYGAVKERDDLVSLIEKKED"
     gene            complement(325..1524)
                     /locus_tag="VHN55_10825"
     CDS             complement(325..1524)
                     /locus_tag="VHN55_10825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX2804454.1"
                     /translation="MNQMRPPPRPRRGPKSADGRAERNDNIRHKKVLLVGSHAPTLVN
                     FRTPLISAIVARGHEVVAVASHMDAESAETLRQLGARSHELQLANQSLNPLAMWGAID
                     ELRRLIRAETPDVVIAYTIKPILVAAMAASAERVPRLVSMITGAGYAFTPGGGVKRTM
                     SRIAATQLYRVALPRSHAVVFQNPDDEAQFRQLGLIAAGQDVRLTNGSGVDLKHFAPT
                     PLPKGASFLMMARFLKTKGIRDYAAAAARLKAAHPGVAVQLVGWADSSPDSISQAELG
                     RIIESGVLFRGRFSDVRPAISNCSVLVLPSYYREGVPRSVLEAMAMGRAIITTDSPGC
                     RETVRDGVNGFLVPPRDPDALYAAMLRFVVEPGLAEQMGAASRKIAETKFDVDGVNAE
                     LLSVADL"
     gene            1752..>3673
                     /locus_tag="VHN55_10830"
     CDS             1752..>3673
                     /locus_tag="VHN55_10830"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate sugar
                     epimerase/dehydratase"
                     /protein_id="HEX2804455.1"
                     /translation="MSALKRYLLLLFRFSPRARTAMVITLDLALCAFAALFAYSLRVG
                     EWRVFTPVALALVVMTCAMWLAVAPFQGVYRSMLRFSGAWAIRDLATSCAIIALLMTV
                     LVVILEVGDGVPRTLSLLVPLMLFLVLASSRIILSALLRDTLYSQRRDGGRDVLIYGA
                     GVTGRELSVSIKNHPEFHVVGFVDDNPLLRGRRLEEHRIWHAAELEDVLARNPVDEVL
                     LAIPGASRSRRRAIIDEVRAIAPGVGVRSLPDLAEIASGRVSVNDLRQVRIEELLGRD
                     QVAPDPRLMSAKITGQSVMVTGAGGSIGSELTRQIVLQSPSRIILAERSEYALYLIDS
                     ELRELCERHRLDVEIEPRLVDVADPRDLERVFSQYSPDTVFHAAAYKHVTLVETDPLA
                     GIRNNVLGSYNCCMLAEQFGVKDFTLVSTDKAVRPSSVMGASKRVCEMIVQSRAAAQD
                     GTRYSAVRFGNVLGSSGSVVPLFRRQIAAGGPVTITDRQATRYFMTISEAAQLVVQAG
                     AMAEGGEIFLLDMGEPVAIYDLAKMMIQLSGLAVVAETGDDGDIEIVEIGLRPGEKLH
                     EELLIGESGFPTSHPRIMKATETAKAGAQFSSRFAELMTALDRRDADAALAAMDQLIS
                     TERRPARTALATAAKSP"
BASE COUNT          637 a         1130 c         1213 g          693 t
ORIGIN      
        1 acgccgctga tcgcatcggt cgtcaaagcc gtcgttctcg tggttgagag cggccggacc
       61 cgtacctcag cggcggttga cgccatccat cgcctgatgg cggccggcgg caacatcctg
      121 ggcgtaaccc tgaccaagag ccggtcgcaa agcagcggct atggttacgg gtacggctat
      181 ggttacgggt acggctatgg ttacggctat ggcaagtacg gctacggcaa gggtcggtat
      241 ggcgcggtca aggagcgcga cgacctggtt tcgctgattg agaagaagga agactgatcg
      301 gctgcccggg ccggcggctc gtggctaaag atccgcgacc gacaacagct cggcgttgac
      361 gccgtccacg tcgaatttcg tctctgcgat ctttcgcgag gccgcgccca tttgctctgc
      421 aagcccgggc tcgaccacga accggagcat cgccgcgtag agtgcgtccg gatcacgtgg
      481 cgggacgagg aagccgttaa ccccatcgcg taccgtttcc cggcagcccg gagagtcggt
      541 cgtgatgatt gctcggccca tcgccatcgc ctcgaggacg gatcgcggca cgccctcgcg
      601 gtagtaagaa ggtaagacaa gcacggagca gttcgatatc gcaggacgaa cgtccgagaa
      661 gcgcccccga aacaggaccc cgctttcgat gatccggccc aactcggcct gtgagattga
      721 atccggcgac gaatccgccc atccgaccag ctgaacggcg acgccggggt gggccgcttt
      781 caaccgcgct gccgccgcgg cgtaatcgcg aattcccttc gtcttgagaa accgggccat
      841 catcaggaag gatgcgccct tcggcagtgg cgttggagcg aagtgcttga ggtcgactcc
      901 cgacccattg gtcaggcgga cgtcctggcc agccgcgatg agtcccaatt gccgaaactg
      961 cgcctcgtcg tccgggttct ggaaaacgac ggcgtgagag cgggggagcg ccacccggta
     1021 aagctgggtc gcggctatcc ggctcatcgt tcgctttacg ccgccgccgg gggtgaacgc
     1081 atagcctgca ccggttatca tcgaaacgag cctggggacg cgctcggccg aggcggccat
     1141 cgcagcgacc aggatcggct tgatcgtgta ggcgatgacg acgtccgggg tctccgcgcg
     1201 aatgagacgc ctcaactcat cgatggcccc ccacattgcg agcgggttca ggctctggtt
     1261 cgcaagctgc aactcgtgag agcgggcgcc aagctggcgg agtgtttcgg ccgattccgc
     1321 gtccatatgc gaagcaacgg caaccacttc atgcccgcgg gcgacaatcg ccgagatcag
     1381 cggagttcga aaattcacca gcgtcggcgc gtgcgagccg accagcagca ccttcttgtg
     1441 gcggatgttg tcgtttcgct ccgctctccc gtcggcggat ttggggccgc gccggggcct
     1501 tggcggcggc cgcatctggt tcatgcggca aagccgaagt ggagcagcat cacgcgtcga
     1561 agccttcgaa tattgaaatt ggacaaattt cctaccgaag tgcatcggct taggctatgc
     1621 cctaatcgcc cgcgcggggg cttacggaat cctgtccgga ggagtggcgc gttggatatg
     1681 ggtctggttc cgcacggtga ccggtcgagg gccgcgccct cacgtcccat tggcgcgagg
     1741 gccagacagg aatgagcgca ctcaagcgat acctgttgct cctgttccgt ttctcgccgc
     1801 gcgcgaggac cgcgatggta atcacgctcg acctcgcgct gtgcgcgttt gcggcactgt
     1861 tcgcttattc gcttcgagtt ggggaatggc gggtgtttac gccggtcgcg ctcgcgctgg
     1921 tcgtaatgac gtgcgcgatg tggctcgcgg tcgcaccgtt ccagggggtt taccgctcca
     1981 tgctccggtt ttccggcgcg tgggcgatcc gcgacctagc gacgagctgt gcaatcattg
     2041 ccctgctgat gacggttctg gtcgtcatcc tggaggtcgg ggacggcgtt ccgcggacac
     2101 tgtccctgct tgtgccgctg atgctgttcc ttgtccttgc ctcttccagg atcatcctgt
     2161 cggcgctgtt gcgcgacacg ttatactcgc agcggcgcga cggcgggcgc gacgtgctga
     2221 tctacggcgc cggcgtcacg ggccgcgagc ttagcgtgtc catcaagaac catcccgagt
     2281 tccacgtcgt cggattcgtc gacgacaatc cgctccttcg cgggcgccgc ctggaagagc
     2341 acaggatctg gcacgccgcc gaactggaag acgtgctcgc gaggaacccg gttgacgagg
     2401 ttctgctggc tattcccggt gcttcccgat cgcggcggcg cgcgatcatc gatgaagtgc
     2461 gagccattgc gccgggagtc ggcgtccggt cgcttcccga cctggcggaa attgcatcgg
     2521 ggcgggtatc cgtgaacgac cttcgccagg tccggatcga agagctgctg gggcgggatc
     2581 aggtcgcccc ggatccacgt ctgatgtcag cgaaaattac cggccagtcg gtgatggtca
     2641 caggcgccgg gggctcgatc ggcagcgagc ttacgcggca gatcgtgctc cagtccccgt
     2701 ccaggatcat cctggcggag aggtcggaat atgcgctgta cctgatcgat tcagagcttc
     2761 gcgagctgtg cgaacgccat cggctcgacg tcgaaatcga accgcggctc gtcgacgtcg
     2821 cggacccgcg cgaccttgag cgcgtgttta gccaatattc gccggacacg gttttccatg
     2881 ccgctgccta taagcatgtc acgctcgtcg agacggaccc gctggcggga attcgaaaca
     2941 acgtccttgg cagctacaat tgctgcatgc tcgccgaaca atttggggtg aaggatttta
     3001 ccctcgtcag cacggacaag gccgtccgtc cgtccagcgt gatgggcgcg tcgaagcggg
     3061 tttgcgagat gatcgtccag agccgggccg ctgcgcagga cggaacccgc tacagtgcgg
     3121 tccggttcgg caacgtgctt ggctcgagcg gttctgtcgt tccgcttttc cggcgccaga
     3181 ttgccgccgg gggtccggtg acgattaccg accgccaggc gacgcggtac ttcatgacga
     3241 tttcggaggc tgcccagctg gtcgtccagg ccggcgcaat ggcggagggc ggcgagatct
     3301 tcctgctgga catgggcgag ccggttgcga tctacgacct cgcaaagatg atgatccagc
     3361 ttagcgggct cgcagtcgtt gccgagaccg gggacgatgg cgatatcgag atcgtcgaaa
     3421 tcggccttcg tcccggcgag aagctccacg aggagttgct gatcggcgaa agcggctttc
     3481 cgacctctca cccgcggatc atgaaggcta ccgaaacagc gaaggccgga gcgcagttca
     3541 gctcgcgctt cgccgagctc atgactgcat tggacaggcg cgatgctgac gctgcattgg
     3601 cggcaatgga ccagttgatc tccacggaac ggcgccctgc caggacggca ctcgcgactg
     3661 ccgccaagtc gcc
//
LOCUS       DATAKH010000255         6177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_14843,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000255 DATAKH010000000
VERSION     DATAKH010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6177
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14843"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VHN55_10835"
     CDS             <1..355
                     /locus_tag="VHN55_10835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX2804456.1"
                     /translation="GAFTPTCSARHLPSYVDKAGELKAKGVDEIACISVNDPFVMAAW
                     GENDGSGDITMLADGNGEFADAVGLAMDGSKFGMGKRSQRYSMIVDDGVVEQVNVEAP
                     GEYKASSAEHMLEQL"
     gene            463..840
                     /locus_tag="VHN55_10840"
     CDS             463..840
                     /locus_tag="VHN55_10840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804457.1"
                     /translation="MARTNQRGRQNNNPTGRNQYSSDWMDTVRDRPMASAAAAAAAVG
                     AGVFLWSKRNQISDQVSRLSDQISDWTMNMESTNSGRELAMTEGPNESSAIESSRNTA
                     KSTGHTAKARRTAGRATPQATTM"
     gene            complement(898..2766)
                     /locus_tag="VHN55_10845"
     CDS             complement(898..2766)
                     /locus_tag="VHN55_10845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017499746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HEX2804458.1"
                     /translation="MKFAASVSLVALALAGCATNAAPPLATAGGDPLAPPPAVNTGPV
                     PTAAMADEFVARAEKQLADLSVDVARASWINATYLTQDTDALAATLGAEYTELQVQLA
                     TEAARYNDVPGLSYDTQRKLNILKQSIVAPAPTVPGAADELSTLLTGMQSAYGKGQGT
                     YKGKPTPGVELEELMGTVRDPALLKEMWVSWHNNVGAPMRDEYQRFVDLSNQGARELG
                     YSDTGAMWRSGYDMTPEEFAALTDQQWSQVKPLYDDLHCYVRSELNDKYGDSVQPDSG
                     PIRADLLGNMWAQEWGTIYDIVAPPGAGDIGYDLTALLKANDYTPEKIVKTGENFFSS
                     LGFAPLPQTFWERSMITKPRDREVVCHASAWDIDNVDDIRIKMCTQVNATDFVTVHHE
                     LGHNYYQRAYAGQPFLYKDSANDGFHEAIGDTIALSVTPAYLAQIDLLPENKIPPASR
                     DVGLLLNQAMDSIAFLPFGLLVDKWRWGVFSGEIAPANYNKAWTDLRLRYQGIVPPVE
                     RTEANFDPAAKFHIPGNTPYTRYFLARILQFQFYKAACEQAGWTGPLHRCSFYNNKEV
                     GQRLNAMLEMGKSRPWPEALQAFTGSNRMSAEPMIEYFAPLQAWLKQQNRGKRCGW"
     gene            complement(2839..3600)
                     /locus_tag="VHN55_10850"
     CDS             complement(2839..3600)
                     /locus_tag="VHN55_10850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003041965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX2804459.1"
                     /translation="MADPALHRWTASDGVELAFHEVGDGRAVILLHGLFSSAEMNWIK
                     FGHAERIASEDFRVIMPDLRAHGESAKPHDAGSYPPGILARDVSELVQHLGLDSFDLG
                     GFSLGARTTIEAVGEGRSPGKAVLGGMGLEGLQRWGRRKQFFLDAIELFDTASRGDPH
                     WLSIQFMKTMKIDREAAAHLLNSFADCEDGWLDKFTMPTLVVCGSEDHDNGSGEELAR
                     ALPDAVYREVPGTHMSSVTKPEFGAAIAEFLASPG"
     gene            complement(3794..4513)
                     /locus_tag="VHN55_10855"
     CDS             complement(3794..4513)
                     /locus_tag="VHN55_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010402665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804460.1"
                     /translation="MTLFVVAGFSFQLAMGRSTFASPPLVHAHAIFFMGWVAIYLLQN
                     VFVATGRMTLHRRLGWIAVGWIVPMIVLGCIVTFAMVQRGQVPFFFRPAHFLIFDPMS
                     VFAFAGLTIAAVVMRRRTEWHRRLHFCGMSILIAPAFGRLLPLPLLQPIGWEVSFAVV
                     LLFPIVGAWSDIRRSGRVHPGWIYGIATMLGTLLLVEAITYSPAGTAIYSWVTEGTPG
                     ESVAPLDFAAPPDGPLMTGRT"
     gene            4726..5208
                     /locus_tag="VHN55_10860"
     CDS             4726..5208
                     /locus_tag="VHN55_10860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011444056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HEX2804461.1"
                     /translation="MKDRDSILKNRWLRPFAHLFGHPSLWHLNRRSVPRALAVGLFAA
                     FILPIGQFVLAALFAVPLRANVPLAAAATLVTNPITFPPVYIAAYRFGRFLLHHSSSE
                     HADQLASSLGSQLLDVSAPTALGMLSFAVIGLVLGFAVGTVWWRFRLLRRWRTRHRKA
                     "
     gene            complement(5218..5652)
                     /locus_tag="VHN55_10865"
     CDS             complement(5218..5652)
                     /locus_tag="VHN55_10865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010164165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX2804462.1"
                     /translation="MSGGCACGRVRFTAKIDNDDAYLCHCRMCQRSSGSISIAFKNVK
                     AEDVAWESGPDWYESSPIARRPYCSACGTSLGFRYKEGSGNIDLTVASFDDPSRFEPK
                     HHFGVESMHRAWLNTEGLPEYRTDEHKPLVERWTKATGKMPD"
     gene            complement(5667..>6177)
                     /locus_tag="VHN55_10870"
     CDS             complement(5667..>6177)
                     /locus_tag="VHN55_10870"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010402873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEX2804463.1"
                     /translation="TQTRAVFVADSVENKKFTKRIAFNVIPHIDVFLDDGSTKEEWKM
                     MVETKKILGSKIKLTATCVRVPVFVGHSEAVNVEFEDELSAAQAKEILREAPGVMLVD
                     KHEDGGYVTPVECVGEYATYVSRVRDDPTVDNGLSLWIVSDNLRKGAALNAVQIAELL
                     GRKHLQKAA"
BASE COUNT         1133 a         1954 c         1975 g         1115 t
ORIGIN      
        1 aggtgccttt actccaacct gttccgcccg gcaccttccc tcctacgtcg acaaggccgg
       61 ggagctgaag gcgaagggag tcgacgaaat cgcctgcatc tcggtcaacg accccttcgt
      121 catggccgcc tggggcgaga atgacggatc cggcgacatc acgatgcttg ccgacggcaa
      181 tggcgagttc gcggatgccg tgggcctggc tatggacggc tccaagttcg gcatgggcaa
      241 gcgcagccag cgctactcga tgatcgtcga cgacggcgtc gtcgagcagg tcaatgtcga
      301 ggctccgggc gaatacaagg catcgagcgc ggagcacatg ctcgagcagc tctaagcccc
      361 gtcttcgtcg cccgtcgctt ggacgcctct cctcaaccga tggtccgcaa cggcggccgc
      421 ttgtgatcgt tgaatctcca ttagcgtaaa ggagagtatt gaatggcaag aaccaatcag
      481 cgcggccgcc agaacaacaa tccgaccggc cgcaaccaat acagcagcga ctggatggac
      541 accgtccgag accggccgat ggcgagcgcc gcagcagcgg ccgcagcggt aggcgccggc
      601 gttttcctgt ggtcgaagcg caaccagatc agcgaccagg tcagccggct gagcgaccag
      661 atcagcgact ggaccatgaa catggagtca accaattccg gtcgtgagct cgcaatgacc
      721 gagggcccca acgagtccag cgcaatcgag tcgtcgcgga acacggcgaa gagcaccggg
      781 catacggcaa aggcccgccg aaccgccggc cgggcgactc cgcaagccac gaccatgtaa
      841 tcaaccggtc catgagacca tcggggcgtc cctcgcgggg cgcccctttt tcttacatca
      901 ccacccgcat cgcttgccgc gattctgctg cttcagccat gcctgcagcg gcgcgaaata
      961 ttcgatcatg ggctcggccg acatccggtt cgatccggtg aacgcctgga gcgcttccgg
     1021 ccacggccgc gacttgccca tttcgagcat cgcgttcagc ctctgcccga cttccttgtt
     1081 gttgtagaaa gagcagcggt ggagcggccc cgtccacccg gcctgctcgc acgccgcctt
     1141 gtagaactgg aactgcagga tgcgggcgag gaaatagcgg gtgtagggag tgttgccggg
     1201 aatgtggaac ttcgccgccg gatcgaaatt cgcttcggtc cgctcgaccg gcggaacgat
     1261 gccctggtag cgaagcctga ggtcggtcca cgccttgttg taattggccg gagcgatctc
     1321 ccccgagaaa acgccccagc gccacttgtc gacgagtagc ccgaacggaa ggaaggcgat
     1381 gctgtccatt gcctggttca gcaacagccc gacatcgcgg ctcgccggcg ggatcttgtt
     1441 ctccggaagc aagtcgatct gggccaggta cgccggcgtg acgcttagcg cgatcgtgtc
     1501 gccgatcgcc tcgtggaagc cgtcgttggc gctgtccttg tagaggaacg gctgcccggc
     1561 ataggcgcgc tggtaataat tgtggccaag ttcgtggtgg acggtgacga agtccgtcgc
     1621 gttcacctgg gtgcacattt tgatccggat atcgtcgaca ttgtcgatgt cccacgcaga
     1681 cgcatggcag accacctcgc ggtcgcgcgg cttggtgatc atcgaccgct cccagaacgt
     1741 ctgcggaagc ggagcgaagc cgagcgagga gaagaaattc tcgccggtct tcacgatctt
     1801 ctccggcgta tagtcgttcg ccttcaggag agcggtgagg tcgtagccga tatcgccggc
     1861 gcccggagga gcgacgatgt cgtagatcgt cccccattcc tgcgcccaca tgttgccgag
     1921 aaggtcggcg cggatcggcc cgctgtcggg ctgcaccgaa tcgccgtatt tgtcattgag
     1981 ctcgctccgg acatagcagt ggaggtcgtc gtaaagcggc ttcacctgcg accattgctg
     2041 atcggtgagg gcggcgaact cctccggagt catgtcgtag ccggagcgcc acatcgcgcc
     2101 ggtgtcggaa tagccgagct cgcgggcgcc ctgattggag aggtcgacga aacgctggta
     2161 ttcgtcgcgc atcggagcac cgacattgtt gtgccagctg acccacattt ccttgagcag
     2221 cgcggggtcg cgaacggtgc ccatcagctc ttcgagctcg acgcccgggg tcggcttgcc
     2281 tttgtaggtg ccctgcccct tgccgtaggc ggactgcatt ccggtcagca gggtcgacag
     2341 ctcgtcggcc gctccgggaa cggtcggcgc cggggcgacg atgctctgtt tcaggatgtt
     2401 gagcttgcgt tgcgtatcgt aggacaggcc cggaacgtcg ttgtaccggg cggcttccgt
     2461 cgcgagctgg acctggagct cggtatattc cgcgccaagc gtggcggcga gcgcatcggt
     2521 gtcctgcgtg aggtaggtgg cgttgatcca gctggccctg gccacgtcga ccgacaggtc
     2581 ggcaagctgc ttctcggctc gggcgacgaa ctcgtcggcc atcgcggcgg tgggtaccgg
     2641 cccggtgttg accgccggcg gcggggctag cggatccccg cccgcggttg cgaggggcgg
     2701 cgcggcattt gtcgcgcagc cggcgagcgc caaagcgacg agcgaaactg aagcggcgaa
     2761 tttcatgggc aggtgtcctc gtcctgaaac tgatgaattt ttcgcgtcct cgaacgctgt
     2821 aactttggcg gcagaccgtc aacccggcga ggcgagaaac tcggcgatcg cggccccgaa
     2881 ctcgggcttc gtcaccgagc tcatgtgagt ccccggcacc tcgcgataga ccgcatcggg
     2941 aagcgcccgc gcaagctcct cgccggagcc gttgtcatga tcttcgcttc cacacacgac
     3001 caaagtcggc atggtgaact tgtccagcca tccatcctcg caatccgcga agctgttgag
     3061 caggtgggct gccgcctcgc ggtcgatctt catcgtcttc atgaactgga tcgacagcca
     3121 gtgcggatcg ccgcgcgagg cggtgtcgaa cagctcgatc gcatcgagga agaattgctt
     3181 gcgacggccc cagcgctgca gcccctcgag ccccattccg ccgagaacgg ccttccccgg
     3241 gctccgcccc tcgcccaccg cctcgatcgt cgttcgggcc cccagcgaga agccgccgag
     3301 gtcgaagcta tcgaggccga gatgctgcac aagctcgctg acatcgcgcg ccaggattcc
     3361 gggcggatag gagccggcat cgtgcggctt ggccgattcc ccatgcgcgc ggagatccgg
     3421 catgatgacc cggaagtctt cgcttgcgat gcgctcggcg tggccgaact tgatccagtt
     3481 catctcggcg ctcgagaaca gcccgtgaag caggatgacc gctctgccat cgccgacctc
     3541 gtgaaaggcg agctcgactc cgtcggaggc ggtccagcga tggagagccg ggtcagccat
     3601 tcaccatctc gttgcttatg ttcactaaag tcacgcgatg aagcgccatt ttcgtgacct
     3661 taagcgatcc agccgcgtag ccgccgaggc tcagcaaggg ccggtccaat ccaacaagtc
     3721 gcattccaca cgcactgcca cagatgcggc tctgtaggac agggatttgt gcaggccgtg
     3781 ctgtgcccgg ggttcaggtt cgcccggtca tcagcggccc gtcagggggc gcggcgaaat
     3841 cgagcggagc gacggactcg ccgggagtgc cctcggtcac ccacgaatag attgcggtcc
     3901 cggccgggct gtaggtgatc gcttcaacca ggagcaacgt gccgagcatc gtcgcgatcc
     3961 cgtaaatcca gcccgggtgc acgcgcccgc tccgccggat gtccgaccag gcgcccacga
     4021 ttggaaatag caacacgacg gcgaacgaga cctcccaccc gatcggttgc aggagcggca
     4081 aggggagaag acgcccgaaa gcgggggcga tcaggatgga cattccgcag aaatgcagcc
     4141 ggcgatgcca ctccgtacgc cggcgcatga cgacggcggc gatggtcagg ccggcgaagg
     4201 cgaacaccga catggggtcg aagatcagga agtgagcagg ccggaaaaag aacggcacct
     4261 ggccgcgctg gaccatggcg aacgtgacga tgcaaccgag gacgatcatc ggcacgatcc
     4321 agccgaccgc aatccagccg aggcgccggt gaagagtcat ccggccggtc gcgacgaaaa
     4381 cgttctgaag caaatagatc gcgacccagc ccatgaagaa gatggcgtgt gcatggacca
     4441 gcggaggcga cgcgaacgtc gacctcccca tcgccagctg gaatgagaaa ccggcgacaa
     4501 cgaacagggt cattacaatg gcgccgcgga gaaagaatcg ttcgtcgcca accaccggcg
     4561 taaagggctc ttgagcgaga gtggccatcg tgatcccccc aatcctcgag agacagtgcg
     4621 acgcggcggt ttttgccacg agagaatgat tcaggatagc ggatttgaaa ggagtggaag
     4681 ctgcgtctgg cgcacgggcg aaggcttcgc ctatgcggat cggcgatgaa agaccgggac
     4741 tcgatcctta agaaccgttg gctgcggcca tttgcccatc tgttcgggca tccgtcgctg
     4801 tggcacctca accgccgaag cgtcccccgc gcgctggctg tgggtctttt cgccgcgttc
     4861 atccttccga tcggccagtt cgtgctggca gcgctgttcg cagtgccgct ccgggccaat
     4921 gtccctctcg ccgccgccgc gactctggtg acgaacccga tcaccttccc gccggtttac
     4981 attgccgcct accgattcgg ccgatttcta ctgcatcact cctcgagcga gcacgccgac
     5041 cagctggcga gcagccttgg gtcgcagctg ctggacgtct cggctccaac cgccttgggc
     5101 atgttaagct tcgctgtcat tggcctggtg ctcggtttcg ccgttggaac cgtctggtgg
     5161 aggttcaggc tcctgaggcg gtggcgaacc cggcaccgaa aagcttaggg cgtcccgtca
     5221 gtccggcatc tttcctgtcg ccttggtcca ccgctcgacc agcggcttgt gctcgtcggt
     5281 tcggtactct ggcagcccct cggtgttgag ccacgcccgg tgcatgctct cgacgccgaa
     5341 atggtgcttt ggctcgaagc gcgacgggtc gtcgaagctg gcgacggtaa ggtcgatgtt
     5401 gccgctgcct tccttgtagc gaaagccgag cgaggttccg cacgcgctgc aatagggccg
     5461 gcgcgcgatc ggcgaactct cgtaccagtc gggcccggac tcccaggcga cgtcctcggc
     5521 cttcacattc ttgaaggcga tcgagatgga gccgctcgag cgctggcaca tccggcagtg
     5581 acacagataa gcgtcgtcat tgtcgatttt cgcggtgaag cgaacgcggc cgcaagcgca
     5641 gccgccggac attaggcgag gctccctcac gccgctttct gcaggtgctt gcggccaaga
     5701 agctcggcga tttgcaccgc gttcagggcc gctcccttgc gcaaattgtc gctgacgatc
     5761 cacagcgaca ggccgttgtc gacggtcgga tcgtcgcgca cccggctgac gtaggtcgca
     5821 tattcgccga cgcactcgac aggcgtgacg tagccgccgt cctcgtgctt atcgaccagc
     5881 atcacgcccg gcgcctcgcg gagtatctcc ttcgcttgcg ccgcggaaag ctcgtcctcg
     5941 aactcgacgt tgaccgcttc ggaatggccg acgaacaccg gaacccgaac gcaagtggcg
     6001 gtgagcttga tcttcgaacc gaggatcttc ttcgtttcca ccatcatctt ccattcttcc
     6061 ttggtcgagc cgtcgtcgag gaagacgtcg atgtggggga tgacgttgaa ggcgatgcgc
     6121 ttggtgaact tcttgttctc gaccgaatcc gcgacgaaca ccgcgcgggt ctgcgtg
//
LOCUS       DATAKH010000256         7180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_6689,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000256 DATAKH010000000
VERSION     DATAKH010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 7180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7180
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6689"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..776
                     /locus_tag="VHN55_10875"
     CDS             <1..776
                     /locus_tag="VHN55_10875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011540479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX2804464.1"
                     /translation="PFPGINVNDSVTKSKFDNLYGCRESLVDAIRRATDVMLAGKVAC
                     VAGFGDVGKGSAQSLRNGGARVIVTEVDPICALQAAMEGYEVVTMEEAVTRADIFCTA
                     TGNMDVITLDHMRAMKNMAIVCNIGHFDSEIQIGALANMKWTEIKPQVDEVEFPDGKK
                     IIVLSKGRLVNLGNATGHPSFVMSSSFTNQVLAQIELFAKSDQYKNDVYVLPKHLDEK
                     VARLHLDKLGVKLTKLNEKQAAYIGVSPEGPFKPEHYRY"
     gene            845..3196
                     /locus_tag="VHN55_10880"
     CDS             845..3196
                     /locus_tag="VHN55_10880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX2804465.1"
                     /translation="MPAYATTAVVGAALAALWIVIAAALSIVAARRLRDANAVISTAR
                     SLQTLLDLSPGRPLVVREDGSIEPDSRLVREIGLDAAPGNLIGLGGEDRGLVPDDVEA
                     LALEVREAAMSGSRFQSQVRVAGSGRVLDVRGAPAPPPEPAGTMLLWLFDTSSAEAER
                     AKLAQRLGQTEAALDALTRLIEAAPFPTWYRGPDLSLGLVNSAFVEAVEGRDAADVIA
                     RSSELVGDSEDAKAAAVEALETGKPTSRKQPAIVRGERRMLHIVNVPLPTGAVAGFAL
                     DVQELEDSRAELARQIQSQRDLVDRMTAGAAQFEGDRSLSFFNRPFAAMTQLDPEWLN
                     EKPEFDRVLERMRETNRVPETRDFPTWKSERRDWFTSPEEVVEEDWMLPGGDHWRVVG
                     QPLPDGGLRLFLEDRTEQARLASARDTLLRVRSATLDNLFEAIGVFASDGRLYLWNRR
                     FSHVWGFDEEWLAENPRVDEMVPALARKLVNPAAAAQIREMVRKTTTDREAASGQITL
                     TDGRHFDFAAVPLPDGNALFTLVDVTDSRRIESALRERATALEQADRVKTDFVANMSY
                     ELRTPLTSIGGFAEMLSQGYAGELAPAASDYVKAILESVERLSKLIDDVLDLTQGDSV
                     GVALERERVDIGGLCRMTVENFEPRTKAKGQKLISEIDERTGTVVGDARRLRESLEHL
                     LENAAAYTDRGGRILAKAWGDEEQAYVQISDNGPGIGKKDLPRVFNRFDRVRHDPSRG
                     EAALGLGLPLARQFVEAHGGKIDLVSTKGKGTTVTLTIPRAPR"
     gene            3193..3627
                     /gene="tsaE"
                     /locus_tag="VHN55_10885"
     CDS             3193..3627
                     /gene="tsaE"
                     /locus_tag="VHN55_10885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEX2804466.1"
                     /translation="MILADEAATRELGKTLASVLRGGDVVTLSGPLGVGKTALARAAL
                     EALGHRGEVPSPTFAIVQPYEELDPPVWHVDLHRIERAGELDELGLESVGDSVLIVEW
                     PERAGPGEWPQALRLTLDFTEGGARRLTAVVPPAWQPRWPPE"
     gene            3612..4610
                     /locus_tag="VHN55_10890"
     CDS             3612..4610
                     /locus_tag="VHN55_10890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003040468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEX2804467.1"
                     /translation="MASRMIPAAEVHEFLARSGWAGARVEPLAGDASFRRYFRVIDGA
                     RSAVLMDAPPAREDVRPFVAVAEWLLSAGLSAPEILARDIEHGLLLLDDFGDWRLRET
                     LDTDPTREVELYELATDVLIHLHKHPPMAGLPVHGMKQWLEELSLFTDWYCPALHLAV
                     DADSFRSAWMEVLAPLEKDGLGPVTVLRDYHAENVMLVRGREGVRHFGLLDFQDALVG
                     HPAYDLASVLEDARRDVPPEIERAMIDRYIAATGRGEAFERAYWALAAQRNTRILGVF
                     TRLWKRDNKPHYTAFQPRMWGLLERDLARPELDPVRLWFDLNVAPEHRAAPWAEAA"
     gene            4607..5368
                     /locus_tag="VHN55_10895"
     CDS             4607..5368
                     /locus_tag="VHN55_10895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010186085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2804468.1"
                     /translation="MKAVKKALRLKAEIASEVPKTAMVLAAGLGKRMRPLTATRPKPL
                     IEVAGKALLDHLLENLRAAGVERVVVNVHYLADAVEAHLRKNPHGLDIAISDERSLLL
                     ETGGGMTKAAPLIHSDPFLVVNSDNLWVDGPADTLKLLASHWDGSRMDALLLLVPHAR
                     AENHRGLGDFHMDRKGRLRRRARSHVAPFVYTGVQIVSKALLQDAPEGPFSANVLWDR
                     AIEQGRCFGAVHQGLWFDVGTPQAIKATELTLEDA"
     gene            5361..>7180
                     /locus_tag="VHN55_10900"
     CDS             5361..>7180
                     /locus_tag="VHN55_10900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HEX2804469.1"
                     /translation="MPEARAELPRRPAVFTIPTHRSFSDSLVAGLIARFGSEPLSLAA
                     GRILLPNNRAVRSVTDAFVRASGSGLVLPRLIPIGDPELEERIGGALDPADSTEPVPP
                     AVEPLQRLLALAEIVRGDGETVVEALRMASELGRTLDSLLIEEIDPHRLAEAAADAPE
                     LARHWQLSLDRLRGAVELWPERLREIGKVDLSERRNLLLRRLAERWEKQPPKGFTVAA
                     GITTAAPAVTAVLATVSAMCEGMVVLPGLALPSMVPDEEWEALGPDEDGRGEATHPQF
                     HLKILLDRIGVAREEVRLWPRVGLAASTWQRARSVANAFASAQFSDKWSTLKPVERRL
                     SGIRTAVLPDSAAEAQAIALAIREALETPERTVALVTPDRTLARRVSALLARWGIAAD
                     DSAGKSLAELPPGTLLLAIASAIAEELAPVPLLALLKHPLVGGDEEARLKWLDDVRLL
                     DLALRGPRPAPGLDGFDRHFAEQEKERKCRGCLAAWTRIRPTLEPLEAAKRETLSLAG
                     LAEKLVRCAGSLAGDRGWRGGDGRMAADVLAEIQASDEAERLAVSPEETVGFLSEMLA
                     GRSVRAAYGGHPRVFIWGLLEARLQQADLMVLGGVNEAVWP"
BASE COUNT         1208 a         2331 c         2465 g         1176 t
ORIGIN      
        1 tgcccttccc cggcatcaac gtcaatgaca gcgtcaccaa gtccaagttc gacaacctct
       61 acggctgtcg cgagagcctg gtcgacgcga tccgccgggc gactgacgtg atgctcgccg
      121 gcaaagtggc ctgcgtcgcc ggcttcggcg acgtgggcaa gggttcggcg cagtcgcttc
      181 gcaacggcgg cgcgcgtgtc atcgtgaccg aagtcgaccc catctgcgcg cttcaggcgg
      241 caatggaggg ctatgaggtc gtgacgatgg aagaggcggt cactcgcgcc gacatcttct
      301 gcaccgcgac cggcaacatg gacgtcatca cgctcgacca catgcgagcg atgaagaaca
      361 tggcgatcgt ctgcaacatc ggccacttcg acagcgagat ccagatcggc gccttggcca
      421 acatgaaatg gaccgagatc aagccgcagg tcgacgaggt cgaattcccg gatggcaaga
      481 agatcatcgt cctgtcgaag ggccgcctcg tgaacctcgg caacgcgacc ggtcacccga
      541 gctttgtcat gagctcgagc ttcaccaacc aggtgcttgc gcagatcgag ctgttcgcga
      601 agtcggacca gtataagaac gatgtctacg tgcttcccaa gcacctcgac gaaaaggtcg
      661 cccggcttca cctcgacaag ctcggagtga agctgacgaa gctcaacgag aagcaggcgg
      721 cctatatcgg cgtgtcgcct gaaggaccgt tcaagcccga gcactaccgc tactgacgca
      781 aacctttgtt ttcccttcgc tcggcgcata tgaaccgagc atggggcgag agagggactg
      841 acgagtgccg gcgtatgcga caactgcagt cgtcggcgct gcgctcgccg cgctttggat
      901 cgtcatcgcc gctgccctgt cgatcgtggc cgcacggcgt cttcgtgatg cgaacgccgt
      961 catttctaca gctcggtcgc tccagacgct gctcgacctt tccccagggc gaccgcttgt
     1021 cgttcgtgag gacggttcga tcgagccgga ctcccggctc gttcgcgaga tcggcctcga
     1081 cgcggcgccg ggaaacctga tcgggctggg cggagaggat cgggggctgg tcccagacga
     1141 tgtcgaagcg ttagccctgg aggtgcgcga ggcggcaatg tcgggcagca ggttccagtc
     1201 ccaggtccgg gttgccggat cgggacgggt tctcgatgtc cgcggagcgc cggcgccgcc
     1261 gccggaaccg gccggcacga tgctgttgtg gttgttcgat accagctcgg cggaagcgga
     1321 acgggcgaaa ctcgcgcagc gactgggcca gaccgaagcg gcgctcgacg cgctcacccg
     1381 cctgatcgag gcggcgccgt tcccgacctg gtaccgcggc cccgacctca gcctcgggct
     1441 cgtcaacagc gccttcgtcg aggctgtcga ggggcgcgat gccgccgacg tcatcgcccg
     1501 aagcagcgag ctcgtcggcg acagcgagga cgcgaaggcg gcggcggtgg aggcgctcga
     1561 aaccggaaag ccgacgtcgc gcaagcagcc ggcaatcgtt cgcggcgagc gaagaatgct
     1621 tcacatcgtc aacgttccgc tcccgaccgg cgcggtagct gggttcgcgc tcgacgttca
     1681 ggagctggag gactcgcggg ccgagcttgc gcgccagatc cagtcgcagc gcgacctcgt
     1741 cgacaggatg accgccggag cggcgcaatt cgagggcgac cgctcgctta gcttcttcaa
     1801 ccggccgttc gcggcgatga cccagctcga tcccgagtgg ctcaacgaga agccggaatt
     1861 cgaccgggtc ctagagcgca tgcgcgagac caaccgggtc ccggagacgc gcgacttccc
     1921 gacttggaaa agcgagcggc gcgactggtt cacaagccct gaagaggtcg tcgaggagga
     1981 ttggatgctc cccgggggcg accactggcg ggtggtcggg cagccgcttc ccgacggcgg
     2041 cctgcgcctg ttcctcgagg accgcaccga gcaggcgcgc ctcgcctccg cccgcgacac
     2101 attgctccgg gtgcgctcgg cgacgctcga caatctgttc gaggcgatcg gcgtgttcgc
     2161 aagcgacggg cgcctgtacc tgtggaaccg ccgcttcagc catgtgtggg gattcgacga
     2221 ggagtggctg gcggaaaacc cgcgggtgga cgaaatggtg ccggcgctgg cgaggaagct
     2281 cgtgaacccg gccgcggcgg cgcagattcg cgaaatggtc cgcaagacga ccaccgatcg
     2341 cgaggcggcg agcggccaga tcacgttgac cgacggccgt cacttcgact tcgcggccgt
     2401 cccgcttccc gacggcaacg cgctcttcac gctggtcgac gtgaccgatt cgaggcgcat
     2461 cgagtccgcg cttcgcgagc gcgcgaccgc tctcgagcag gccgaccggg tcaagaccga
     2521 cttcgtcgcc aacatgagtt acgagctccg cacgccgctg acgtcgatcg gcggcttcgc
     2581 cgagatgctg tcgcagggct atgccggcga gcttgctccc gccgcctcgg actatgtgaa
     2641 ggcgatcctc gaatcggtcg agcgattgtc gaagctgatc gacgacgtgc tcgaccttac
     2701 ccagggcgac tcggtcggag tcgcgctcga gcgcgaacgg gtcgacatcg gcggactgtg
     2761 ccggatgacg gtcgagaatt tcgagccgcg aaccaaggcc aagggccaga agcttatcag
     2821 cgagatcgac gagcgcaccg gaacagtggt cggcgatgcc cgtcgccttc gggagtcgct
     2881 cgagcatttg ctggaaaacg ccgccgctta taccgaccgt ggcggaagaa tcctggcgaa
     2941 ggcgtggggc gatgaagagc aggcctatgt ccagatcagc gacaacggtc ccggtatcgg
     3001 caagaaggac ctgccgcggg tgttcaaccg cttcgaccgg gtgcggcacg acccgtcgcg
     3061 gggcgaggcc gcgcttgggc tcggccttcc gctcgccagg caattcgtcg aggcccacgg
     3121 cgggaagatc gacctcgttt cgaccaaggg gaaaggcacg acggtcacct tgacgatacc
     3181 gcgcgcgccc agatgatcct cgccgacgaa gccgcgaccc gggaattggg caagacgctc
     3241 gccagcgtgc ttcggggcgg cgacgtggtg acgctttcgg gcccgctcgg agtcggcaag
     3301 acggcgcttg cgcgggcggc actcgaagcg ctcgggcatc gaggcgaggt gccgagcccg
     3361 accttcgcca tcgtgcagcc gtacgaggag ctcgatccgc cggtctggca cgtcgacctg
     3421 caccggatcg aacgggctgg cgagttggat gagcttggac tcgaatcggt cggggactcg
     3481 gtgctgatag tcgagtggcc cgagcgagcc ggcccaggtg aatggccgca agcgcttcgg
     3541 ctgacgctgg attttaccga aggcggcgct cggcgcttga cagcggtcgt gcctccggca
     3601 tggcagccaa gatggcctcc cgaatgattc cggctgccga agtgcatgaa ttccttgccc
     3661 gaagcggctg ggccggagct cgagtcgagc cgctggccgg cgacgcctcg ttccgccgct
     3721 atttccgggt gatcgacggt gcccgctcgg cagtcctgat ggatgcgccg ccggcgcgcg
     3781 aggacgttcg cccgttcgtc gcggtcgcgg aatggctcct gtcggcgggc ctgagcgcgc
     3841 cggagatcct cgcccgcgac atcgagcacg ggcttctcct cctcgacgat ttcggcgact
     3901 ggcggcttcg cgagacgctc gacaccgacc cgacccggga agtggagcta tacgagctgg
     3961 caaccgacgt gctgatccac ctccacaagc atccgccgat ggccgggctt ccggtccacg
     4021 ggatgaagca gtggctggag gagctttcgc tattcaccga ctggtattgc ccggcgcttc
     4081 acctggccgt cgatgccgac tcgttccgaa gcgcctggat ggaggtgctg gcgcccctcg
     4141 aaaaggacgg gctcggcccg gtgaccgtgc ttcgcgacta tcacgcagag aatgtaatgc
     4201 tggtgcgcgg gcgcgagggc gtccggcatt tcgggcttct cgatttccag gatgcgctgg
     4261 tcggccatcc cgcatacgac cttgcctcgg tgctcgagga tgcgcgccgc gacgttccgc
     4321 ccgagatcga gcgggcgatg atcgaccgtt acattgccgc aaccgggcga ggggaggctt
     4381 tcgaacgcgc ctattgggcg ctcgccgcgc agcgaaacac gcgaatcctc ggggtcttca
     4441 cgcggctttg gaagcgcgac aacaagccgc actataccgc cttccagccg cgcatgtggg
     4501 gtcttctcga gcgcgatctt gcccgtccgg agctcgatcc cgtccgcttg tggttcgacc
     4561 tcaacgttgc ccccgaacat cgcgccgcgc cctgggcgga ggcggcatga aggcggtgaa
     4621 aaaggcgctt cgcctgaagg ccgaaatcgc aagcgaggtg ccgaagacag cgatggtcct
     4681 cgccgcgggc ctgggcaagc ggatgcgtcc gcttacagcg acccggccga agccactgat
     4741 cgaggtcgcc ggaaaggccc ttctcgacca tttgctcgag aacctacggg ccgccggagt
     4801 cgagcgggtc gtcgtcaacg tccactacct tgccgatgcc gtcgaggcgc atcttcgcaa
     4861 gaatccgcat ggcctggata tcgccatctc cgacgagcgg tcgctgctgc tcgagactgg
     4921 cggcgggatg acgaaggcgg cgcctttgat ccactccgac ccgttcctcg tggtcaacag
     4981 cgataatttg tgggtcgatg ggcccgctga cacgctcaag cttttggcct cgcactggga
     5041 cggaagcagg atggacgcgc ttctgctgct ggtgccgcac gcgcgcgccg agaaccaccg
     5101 cggtctcggc gacttccaca tggaccggaa ggggcggctt cggcgccgcg cccggtcgca
     5161 cgtggcgcct ttcgtctata ccggcgtgca gatcgtgtcg aaggcgctcc tccaggacgc
     5221 gcccgaagga cctttctcag ccaatgtgct gtgggacagg gcgatcgagc aggggcgatg
     5281 cttcggcgca gtccaccagg gcttgtggtt cgatgtcggg actccgcaag cgatcaaggc
     5341 aaccgaactg acgctagagg atgcctgagg cccgagccga gcttccgcgg cggcccgccg
     5401 tcttcacgat cccgacccat cgctcgttct ctgactcgct cgttgcgggg ctgatcgcgc
     5461 gcttcgggag cgagccgctg tcgcttgctg ccgggagaat cctgcttccg aacaatcggg
     5521 ccgttcgaag cgtcaccgac gccttcgtcc gggcgagcgg gtccgggctc gtccttccgc
     5581 ggttgatccc gatcggcgat cccgagctgg aggagcggat cggtggcgcc ctcgaccccg
     5641 ccgattccac cgagccggtc ccccccgcag tggagccgct gcaacggttg cttgcgcttg
     5701 cggagatcgt gcgcggggac ggcgagacgg ttgtcgaggc gcttcgaatg gcgagcgaac
     5761 ttggccggac actggactcg ctgctcatcg aggagatcga tccgcaccgg ctggcagaag
     5821 ccgccgcgga cgcgccggag ctggcgcgac actggcagct gtcgctcgac cggctgcgcg
     5881 gcgccgtcga gctttggccg gagcggctcc gagaaatcgg caaggtggac ttgtcggagc
     5941 ggcgaaacct ccttctccgc cgactggcgg agcggtggga aaagcagccg ccgaaaggat
     6001 tcaccgtcgc cgcggggatt accaccgcgg cgccggcggt aaccgccgtt ctcgcaacgg
     6061 tttcggcgat gtgcgaaggg atggtcgtcc ttccgggcct cgccctccca tcgatggttc
     6121 cggacgagga atgggaagcg ctcggccctg acgaggacgg acgcggcgag gccacgcacc
     6181 cgcagttcca cctcaagatc ctgctcgacc ggatcggtgt tgcccgggaa gaagtgcggc
     6241 tgtggccgcg agtgggactt gccgcctcca cctggcagcg agcgcgatcg gtcgccaacg
     6301 cctttgcctc ggcacaattc tccgacaaat ggagcacgct caagccggtc gagcgccggc
     6361 tcagcggcat tcgcacggcc gtactgccgg attccgccgc ggaagcgcag gccatcgccc
     6421 ttgcgatacg cgaagcgctc gagactcccg aacgcacggt cgcgctggtt acgcccgatc
     6481 gcacgctcgc gcgcagggtg tcggccctgc ttgcaaggtg gggaatcgca gccgacgaca
     6541 gcgccggaaa atcgcttgcg gaacttcccc ccgggacgct ccttttggcg atcgcctcgg
     6601 caatcgcgga agagcttgcg ccagtgccgc tgctggcgct cctgaagcat ccgctcgtcg
     6661 gcggcgatga agaggcgagg ttgaagtggc tcgacgacgt tcggctgctc gacctcgccc
     6721 ttcgtggtcc gcggccggcg ccggggcttg acggattcga ccgccacttc gccgagcagg
     6781 aaaaagagcg caaatgccgc ggttgccttg ccgcgtggac ccgaatccgg ccgactctcg
     6841 agccgctcga agccgcaaag cgggaaacgc tctcgctcgc aggcttggcg gaaaagctcg
     6901 ttcgctgcgc cggatcgctg gccggcgacc gcggctggcg cgggggagac gggcgaatgg
     6961 cggcggacgt gctggcggaa atccaggcat cggacgaagc ggagcgcctc gccgtatcgc
     7021 cggaggagac ggtgggcttc ctttcggaaa tgctcgccgg ccggagcgtt cgtgcggctt
     7081 atggcggcca tccgcgcgtg ttcatctggg gacttctcga agcgcggctc cagcaagcgg
     7141 atttgatggt gctcggcggt gtcaacgagg cggtgtggcc
//
LOCUS       DATAKH010000257         1680 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_6750,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000257 DATAKH010000000
VERSION     DATAKH010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6750"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..874
                     /locus_tag="VHN55_10905"
     CDS             <1..874
                     /locus_tag="VHN55_10905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010215095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX2804470.1"
                     /translation="VLKNVPARTAQGMKFPGAPYGLKMACGENPKRVYGSKGSIPGTR
                     MGNIALTRATWIKAQAYKRKWDKYYGNGGDMPERDLAMDTLMGVLDGKILIHNHCYRA
                     DEMANMIDVSKEFGYKITAFHHAVEAYKIADLLAANGICAAMWADWYGFKMEAYDGVQ
                     ENIPLVHNAGPGACAIVHSDDPNGIQRLNQEAAKALADGQRAGIPNLSEAIAWQWLSA
                     NPAKALGIFDKTGSLAAGKMADVVLWNADPFSIYARPERVWIDGALMYDANDPKRRPV
                     SDFELGQPGEGDVK"
     gene            871..>1680
                     /locus_tag="VHN55_10910"
     CDS             871..>1680
                     /locus_tag="VHN55_10910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017670199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX2804471.1"
                     /translation="MIRTALAALLLTTAVPATAQTIAIVNGKVATGDGSGPVEGGIVV
                     IRDGRVVAAGPRVRIPGGAQVIDAAGKWVTPGIVAGFSRLGLADVDLGAGGADDTQAS
                     SGPFSAAIDVSTAINPNYTPVEVNRSDGVTRAVVAPAAPRSIFAGQGAIIDTGADLYP
                     ITKARAFQFVELGEAGAGKAGGSRPSAHVLFRNALREAAELRRYAEPVRSGGGLEPQD
                     WRLRTVITNPNEARVYRPDARRSEDVLLTRFDAAALVPVLQGAQPLLVHVER"
BASE COUNT          302 a          552 c          580 g          246 t
ORIGIN      
        1 ggtcctcaag aacgttcctg cccgcaccgc gcagggaatg aagtttcccg gcgctcctta
       61 cgggctgaaa atggcgtgcg gcgagaatcc caagcgggtg tacggctcga aaggaagcat
      121 tccgggaacg cgcatgggca atatcgcgct gacccgggcg acctggatca aggcccaggc
      181 ctacaagcgc aagtgggaca aatattacgg caacggcggc gacatgccgg agcgagacct
      241 ggcgatggac acgctgatgg gcgtgctcga cggcaagatc ctgatccaca atcattgcta
      301 tcgcgccgac gagatggcca acatgatcga tgtgtcgaag gagttcggct acaagatcac
      361 ggccttccac cacgcggtgg aagcctacaa gatcgccgac ctgctggccg cgaacggcat
      421 ctgcgcggcg atgtgggccg actggtacgg gttcaagatg gaagcctatg acggcgttca
      481 ggagaacatc ccgctggtcc acaatgccgg acccggtgct tgcgcgatcg tccattccga
      541 cgatccgaat gggatccagc ggctgaacca ggaagccgcc aaggcccttg ccgacggcca
      601 gcgcgcgggc atcccgaacc tgtcggaggc gatcgcctgg caatggctgt cggccaatcc
      661 cgcgaaggcg ctcggaatct tcgacaagac cggcagcctt gcggccggca agatggcgga
      721 cgtcgtgctg tggaacgcgg acccgttcag catttacgcc cggcccgagc gagtctggat
      781 cgacggcgcc ctgatgtacg acgccaacga cccgaagcgg cgcccggtca gcgacttcga
      841 gcttggccag ccgggcgaag gggacgtgaa atgatccgca ctgcgctggc cgcactgctg
      901 cttaccaccg ccgtcccggc taccgcacag acgatcgcca tcgtcaacgg caaggtcgcg
      961 accggtgacg ggtcggggcc cgtcgagggc ggcatcgtgg tgatccgcga cgggcgcgtt
     1021 gtcgccgccg gcccgcgggt tcggattccc ggcggagcgc aggtcatcga tgcggcgggc
     1081 aagtgggtga cgccggggat cgtcgccgga ttctcgaggc tcggcctcgc tgacgtcgat
     1141 ctcggtgctg gcggggccga cgacacgcag gcgagcagcg gaccgttcag cgccgcgatc
     1201 gacgtatcga ccgcgatcaa tcccaattac acgccggtcg aagtgaaccg cagcgacgga
     1261 gttacccgtg cggtggtcgc cccggctgcc ccgcgaagca tcttcgccgg ccagggcgcg
     1321 atcatcgaca cgggcgccga cctttacccg atcaccaaag cgcgagcctt ccagttcgtc
     1381 gagctcggcg aggccggtgc aggcaaggcg ggcggatcgc ggccctcggc gcacgtgctg
     1441 ttccggaacg cgctcaggga ggcggccgag cttcgccgct atgcggagcc ggtgcggtcg
     1501 gggggcgggc tcgagccgca ggactggcgg ctccgcaccg tgatcaccaa tcccaacgaa
     1561 gcgcgggtct accggcccga cgcgaggcgg agcgaggacg tgctcctgac ccgcttcgac
     1621 gccgccgcac tcgtcccggt cctccagggc gcgcagcctt tgctcgtcca cgtcgagcgg
//
LOCUS       DATAKH010000258         6256 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_6790,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000258 DATAKH010000000
VERSION     DATAKH010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6256
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6790"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..803
                     /locus_tag="VHN55_10915"
     CDS             228..803
                     /locus_tag="VHN55_10915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804472.1"
                     /translation="MRRLRHLLWLLLLGWGAAAHAQVEIAFYSKDMASTFPHAYVRLT
                     GTDDSTGEAVDSNYGFTPVKLTPGVLFGPVKGAVESVGPAYIARSDRHFSLKLTDAQY
                     RRVLAVVESYRNARQPSYRLNGRNCVTFVADVAMALGLSAPVVPRLMKKPKSYLQMVS
                     QTNAALIASWPQRIAKAAQAAPPQQAAATTH"
     gene            804..1550
                     /locus_tag="VHN55_10920"
     CDS             804..1550
                     /locus_tag="VHN55_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007705867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX2804473.1"
                     /translation="MPEGKTRLTEVNGTRLAYRFRPGRSPTLMFLPGYASDMEGTKAL
                     ALDAFAEAEGMAMLRFDYSGTGESGGEFEGGTLGGWLEEALALLDTLVEGPAILVGSS
                     MGGWIALLMAKHRPQRIAALAGIAAAPDFTDWGYSDSEKETLRRDGRLEQPNPHAAEP
                     QVTTLGFWQSGEALRLLDEPIPVDCPVRLVHGDADSEVPVEIAMKTMRQLRSADVQLL
                     LVKGGGHRLSERHEIDAIVRTVAALVEKVQ"
     gene            1547..2230
                     /locus_tag="VHN55_10925"
     CDS             1547..2230
                     /locus_tag="VHN55_10925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804474.1"
                     /translation="MILAIAAALAAAQPAPCPDVVTADAFVCRAIGASADHKPAEAAE
                     AFEQAAQALEPSDPQVARLLAAAGNMWIAAGRPGKAALALDKAVSGSGLQGPQRGEAL
                     LDRARAAEAQNDLKTARAKVNEAAQTIAEDPFLWYFSAALAIREGDAETAKSSIGQAL
                     TLAPGDPTILFEAGHVAQFTGDTVGARHYWTRVIELDPNGVPGKAAREALKLLPAQVT
                     VQGKAEEAK"
     gene            2236..2958
                     /gene="gloB"
                     /locus_tag="VHN55_10930"
     CDS             2236..2958
                     /gene="gloB"
                     /locus_tag="VHN55_10930"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEX2804475.1"
                     /translation="MLDIVAVPAFSDNYHWLVHDTDSGDTAVVDPGDAQPVLAEARRR
                     GWRIGQVWNTHWHPDHTGGNLAIKTATGATVSGPADEEIPGRDIALSEGDSVRLGEHV
                     GRVIAVPGHTLGHIALIFDDAEVAFVGDTLFAMGCGRLFEGTPQQMFESLGRLSSLPE
                     QTRLYCAHEYTLSNARFAANAEPGNAAVAERLREVERMRERGEITIPTTVAAERATNP
                     FVRSGDWQEFARLRAAKDSFRS"
     gene            2955..3416
                     /locus_tag="VHN55_10935"
     CDS             2955..3416
                     /locus_tag="VHN55_10935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804476.1"
                     /translation="MIAGLFCAGLRGEAKEVAMRHVISVALAAAVAGCTYAPPQPALV
                     DPMGQARLSQLLAGKAAGPPQRCIPRYQAENLQAVDARTLAFRDGSRVYLNRVEGACS
                     GLGVGYTLVMKPFGFGGPCRGDVAHVVEPSSGMIAGSCILGDFIPYTPIRR"
     gene            complement(3413..5167)
                     /locus_tag="VHN55_10940"
     CDS             complement(3413..5167)
                     /locus_tag="VHN55_10940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019834164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX2804477.1"
                     /translation="MKAARQLEHFDNLVQMFLTRAAEKGDAPFLWARRDGEWRATSWA
                     EARRQVIALATSLKGMGLAPGDRVMLVSENRPEWLISDLAIMAAGCVTVPTYTTNTIR
                     DHAHILGNSGAKAVIVSSQKLAKSLVPAVLTSTDCHHVVGIEDIRVGQSPEWIKCHSW
                     TKLAAAEGDSADVEQRAGEAKRDDLACIIYTSGTGGAPRGVMQHHGALLHNIAGATDV
                     ISSDFGWGDEVFLSFLPASHALEHTGGQLFPIGLGAQIYYAESIEKLAANIEETRPTI
                     MIVVPRLFEMLRSRILKGLEGSGGLSKYLFRRALSIGEQKYEGRLKPWNLPLDGLLEL
                     TLRRKLRAKVGGRTKAWVSGGAPLNPDVGIFFQSLGITFLQGYGQTEAGPVISCNRPS
                     VGIRLETVGPPIKDTEVKIAEDGEIMVRGELVMHGYWRNPEETARVLSGDGWLATGDV
                     GHFDDKGRIVITDRKKDIIVNDKGDNVAPQRIEGMLTIQPEIAQAMVYGERKPHLVGL
                     LVPDPEIAGRSDVQQRLSAALDRVNADLSVIEKVRRFIIADEPFTIENEQLTPSMKIR
                     RHVIIDVYGERLDSLYRR"
     gene            complement(5164..>6256)
                     /locus_tag="VHN55_10945"
     CDS             complement(5164..>6256)
                     /locus_tag="VHN55_10945"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX2804478.1"
                     /translation="TRVKNLAFAEFLGRVANEGPDAFYVGSNARAIASATVTSKINPS
                     LMTAADVTRYQPKRQPPLCGNYRGYRICGMGPSSSGGTTVFAILKQLERFDMAKLGPH
                     SPTAWHLIAESQRLAYADREKYLADAAFVSVPVAGLMDPAYLARRSALISPDKALASV
                     SAGIPDGAPQTCPPIRMPERGTSHFVVVDRWGGVVSETSTIESAFGSGLMVNGYYLNN
                     ELTDFSFEPVKDGCRVANRVEGGKRPRSSMSPTIVYAPDGEVRLAVGAAGGTTIIAQV
                     AKIIVGVIDWNLTAQDAIALPTIFAPGETVYLERGTWLADMAPELQALGHSIGYRPPG
                     TFKANAIERVNGRWVGAADPRSEGAAVSQ"
BASE COUNT         1057 a         2058 c         2024 g         1117 t
ORIGIN      
        1 ggccaatcgc gacaaggagc cgcggctcaa catgggcccg gacagcggca aggattcgac
       61 gacgtggatc atcattggcc tggttgtcgc cggtgccgtg gtttggggcg ccaccgaagt
      121 tttcgacggt gatgatgacg acgacgaaag cgattcttcg gactaaaacc atgtgcgcgg
      181 ggcgacgttc tccacgccgg cccgctttca atccgggatc ggtgaaaatg cgtagactcc
      241 gccaccttct ctggctgctg ctcctcggat ggggcgccgc cgcccatgcc caggtcgaga
      301 tcgctttcta ttcgaaggac atggcgtcga ccttcccgca tgcctacgtc cgcctgacgg
      361 gaaccgacga ttcgacgggt gaggcggtcg attccaacta cggcttcacg ccggtgaagc
      421 tcactccagg cgtcctgttc ggccccgtca aaggcgccgt cgagtccgtt ggccccgcct
      481 atatcgcacg cagcgaccgc cacttttcgc tcaagctgac cgacgcccag taccggcggg
      541 tgcttgcggt cgtcgaaagc taccggaatg cgcggcagcc ctcgtatcgg ctgaacggac
      601 gcaattgcgt caccttcgtc gccgatgtcg ccatggcgct cggcctaagc gctcccgtgg
      661 ttcccaggct gatgaagaag ccgaagagct atcttcaaat ggtcagtcaa accaatgcgg
      721 cgctgatcgc aagctggccg cagcggatcg ccaaggccgc acaggccgca cctccgcaac
      781 aagcggccgc aaccacgcac tgaatgcccg aaggaaaaac tcgcctcacc gaggtcaacg
      841 gcacccgcct ggcctatcgc tttcgccccg gccgctcccc gactttgatg ttcctgcccg
      901 gttatgcgtc ggacatggag gggacgaagg cgcttgcgct cgacgccttc gcagaagccg
      961 aaggaatggc gatgctgcgc ttcgactatt ccgggaccgg cgagtctggc ggtgaattcg
     1021 aaggcggcac tctcggcggc tggctcgagg aagcgctggc gctgctcgat actcttgtcg
     1081 aaggcccggc aatcctggtc gggtcgtcga tgggcggatg gatcgctctg ctgatggcga
     1141 agcaccggcc gcaacgcatc gcggcgctgg ccgggatcgc ggccgcgccc gactttaccg
     1201 actggggcta ttcggattcg gagaaagaaa cgcttcgccg cgacggccgg ctcgagcaac
     1261 cgaaccccca cgcggcggaa ccgcaggtga ccacattggg cttctggcaa tcgggcgagg
     1321 cgcttcggct gctcgacgaa ccgatccctg tcgattgccc ggtccggctc gtccatggcg
     1381 acgccgacag cgaagtcccc gtcgagatcg ccatgaagac aatgcgccag ctgcgttcag
     1441 cggatgtcca gctgcttctg gtcaagggcg gcggccaccg cttgtcggag cgccatgaga
     1501 tcgatgcgat cgtgcgcacc gttgccgctc tcgtggagaa agtccaatga tccttgccat
     1561 cgccgcagcc cttgccgcag cccagccggc cccctgcccc gatgtcgtca ctgccgacgc
     1621 tttcgtgtgc cgggccatcg gggccagtgc ggatcacaag ccggcggaag ccgccgaggc
     1681 attcgagcag gcggcgcagg cgctggagcc gtccgacccg caagtggctc ggctccttgc
     1741 cgctgccggg aatatgtgga tcgcggccgg tcgcccggga aaggcggcgc ttgcgctcga
     1801 caaggcggtc tcgggctcgg ggctccaggg tccgcagcgc ggcgaggcgc tactcgaccg
     1861 agcacgcgcg gccgaggcgc agaacgacct caagacagcc cgcgccaagg taaacgaggc
     1921 ggcccagacc atcgccgagg acccgttcct ctggtatttc tccgctgcgc tggcgatccg
     1981 tgaaggcgat gccgaaaccg ccaagtcgag catcggacag gcgctgacgc tggcccccgg
     2041 ggatcccacg atcctgttcg aagctgggca tgtcgcccag ttcaccggcg acaccgtggg
     2101 ggcgcgtcac tactggaccc gggtgattga gctggatccg aacggagtcc cgggcaaggc
     2161 ggcccgcgaa gctttaaagc tgcttcccgc tcaagtaacc gtgcaaggca aggcggagga
     2221 ggctaagtag ggccgatgct cgatatcgtc gcggtccctg cattttccga caattatcat
     2281 tggctcgtcc acgacaccga cagcggcgac accgcggtcg tcgatccggg agatgcacag
     2341 ccggtgctgg ccgaggcacg acgccgtggc tggcgaatcg gccaggtgtg gaacacccac
     2401 tggcaccccg atcacaccgg cggaaacctc gcgataaaga cagcgacggg cgcgacagtc
     2461 tccggtccgg ccgacgagga gatccccgga cgtgacatcg ctttgtccga aggagacagc
     2521 gtgcggctcg gcgagcatgt cggccgggtc atcgcggttc ccggccatac gctgggacac
     2581 attgccctga tcttcgacga tgccgaagtg gcatttgtcg gcgacacctt gttcgcaatg
     2641 ggctgcggcc gcctgttcga aggcactccg cagcagatgt tcgaatcgct cgggcgcctg
     2701 tcgtcgctgc cggagcagac ccgcctttat tgcgcgcatg aatatacgct ctcgaacgcc
     2761 aggttcgccg cgaatgcgga accgggaaat gcggcggtcg cggagcgctt gcgcgaggtc
     2821 gagcggatgc gggagcgggg cgagatcacg atcccgacaa cggtcgcagc ggaacgtgcg
     2881 accaacccct tcgttcgctc cggtgactgg caggagtttg cgcgtcttcg agccgccaag
     2941 gacagcttcc gttcatgatt gctggcctct tctgcgcggg gctgagaggt gaagccaagg
     3001 aggttgcaat gcgccacgtc atctcagtcg cactcgcagc ggcagtcgcc ggctgcacct
     3061 atgcgccgcc gcagcccgcg ctggtcgatc caatgggcca ggcgaggttg agccagctgc
     3121 tggccggcaa ggccgccggg cctccgcagc gctgcatccc gcgctaccag gcggagaatc
     3181 tccaagccgt cgatgcccgg acgctggctt tccgcgacgg ttccagggtt tatctcaacc
     3241 gcgtggaggg cgcctgcagc ggtcttgggg tcggttacac gctggtgatg aagccgttcg
     3301 gcttcggcgg accctgccgc ggcgacgtcg cgcatgtcgt cgaaccctcg tcaggaatga
     3361 tcgcaggcag ctgcatcctc ggcgacttca ttccctacac gccgatccgg cgctagcggc
     3421 gataaagcga atccagacgc tcgccgtaga cgtcgatgat gacgtgacgg cgaattttca
     3481 tcgacggcgt cagctgctcg ttctcgattg tgaacggttc gtccgcgatg atgaaccggc
     3541 ggactttctc gatcaccgaa agatcggcgt tgacgcgatc gagagcggcg gaaaggcgct
     3601 gctggacatc gctcctgccg gcgatctccg ggtccgggac gagcagcccg acgaggtgcg
     3661 gcttgcgctc cccatagacc attgcctggg cgatctccgg ctggatcgtc agcattccct
     3721 cgatccgctg cggggcgaca ttgtcgccct tgtcgttgac gatgatgtcc ttcttgcggt
     3781 cggttatgac gatcctgccc ttgtcgtcga aatgaccgac gtcgccggtc gccagccagc
     3841 cgtccccgct tagcacccgc gctgtttctt ccggattgcg ccaatagccg tgcatgacca
     3901 gttcgccgcg gaccatgatc tcgccgtcct cggcgatctt gacctcggtg tccttgatcg
     3961 gcgggccgac ggtttcgagc cggatgccca cgctcgggcg gttgcagctg atcaccggcc
     4021 ccgcctcggt ctgcccgtag ccctggagga aggtgattcc gagcgactgg aagaagatgc
     4081 cgacatcggg attgagcggc gctccgcccg acacccacgc cttggtcctt ccgccgacct
     4141 tggcccgaag cttgcgccga agcgtaagct cgagaagtcc gtcgagcggc aggttccagg
     4201 gcttgagcct gccttcatac ttctgctcgc cgatcgatag cgcgcgccgg aagaggtatt
     4261 tcgacaaccc gccgcttccc tccagcccct tgaggattcg cgagcggagc atctcgaaca
     4321 gcctcgggac gacgatcatg atcgtcggcc tggtctcctc gatgttggcc gcgagcttct
     4381 cgatgctctc ggcgtaatag atttgcgctc cgagcccgat cgggaacagc tgcccgccgg
     4441 tgtgctcgag cgcgtggctt gccggaagga acgacaggaa cacctcgtcg ccccaaccga
     4501 aatcgctcga tatgacgtcc gtcgccccgg cgatattgtg cagtagcgcc ccgtgatgct
     4561 gcatcacccc gcgcggcgca ccgccggtgc cgctggtgta gatgatacag gcaagatcgt
     4621 ctcgcttcgc ttcgccggct cgctgctcga catcggcgct gtctccctcc gcggccgcga
     4681 gctttgtcca cgaatggcat ttgatccatt cgggagactg gccgacgcgg atatcctcga
     4741 tcccgacgac gtggtggcaa tcggtcgagg tcaggaccgc ggggaccagc gacttcgcca
     4801 gcttctggct tgagacgatc actgcctttg cccccgaatt gccgaggatg tgggcatgat
     4861 cacggatcgt gtttgtcgtg taggtcggga cggttacaca gccggcggcc atgatcgcca
     4921 ggtccgagat caaccattcg ggccggtttt cgctgaccag catcacccgg tcgcccggcg
     4981 ccaggcccat ccctttcagg ctggtggcca aagcgatcac ctggcgccgg gcttcggccc
     5041 agctcgtcgc tcgccattcg ccgtcgcgcc tggcccacag gaacggggcg tcgccctttt
     5101 cggcggcgcg ggtaaggaac atctggacga ggttgtcgaa atgctcgagc tgccgtgctg
     5161 ctttcattgc gaaaccgcag ccccctcgct tcgcgggtcg gcggcaccca cccagcgccc
     5221 attcacccgc tcgatcgcat tcgccttgaa cgtgcccggc gggcggtagc cgatgctgtg
     5281 gccaagcgcc tgcagctcgg gagccatgtc ggcaagccaa gtcccgcgct ccagatagac
     5341 ggtttctccg ggggcgaaga tcgtcggcag tgcgatggcg tcctgcgccg tgagattcca
     5401 gtcgatgact cccacgatga tcttggcgac ctgcgcgatg atcgtggttc cgccggcggc
     5461 gccaaccgcc agccggacct cgccatccgg ggcatagacg atggtcgggc tcatcgagct
     5521 tcgcgggcgt ttgccgcctt cgacccggtt ggcgacacgg catccgtcct tcaccggctc
     5581 gaagctgaag tccgtcagct cgttgttgag ataatagccg ttgaccatca gcccggaccc
     5641 gaaggcgctt tcgatcgtcg aggtttcgga cacgacgccg ccccagcggt ccacgaccac
     5701 gaaatgcgaa gtcccgcgct ccggcattcg aatcggcggg cacgtttgcg gcgcgccgtc
     5761 cggaatcccg gcgctcaccg acgcgagggc tttgtccggc gagatcaggg ccgatcggcg
     5821 ggcgagatag gccgggtcca tcagcccggc gaccggaacg gaaacgaacg cagcgtcagc
     5881 gagatatttt tcgcggtcgg cataagcgag gcgctgtgac tccgcgatca ggtgccaggc
     5941 cgtcggcgaa tgcgggccga gtttcgccat gtcgaaccgt tcgagctgct tgaggatcgc
     6001 gaacaccgtc gtcccgcccg acgaggacgg gcccatcccg cagattcgat agccgcgata
     6061 gttgccgcaa agcggcggct gccgtttcgg ctgatagcgg gtgacgtcgg cggcggtcat
     6121 cagcgatgga ttgatcttgc tggtcacagt cgcggaagcg atggcccggg cattcgagcc
     6181 gacgtaaaag gcgtccggcc cctcgttcgc cacgcgtccg aggaattccg cgaaggcgag
     6241 gttcttcacc cgcgtt
//
LOCUS       DATAKH010000259         6209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_6970,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000259 DATAKH010000000
VERSION     DATAKH010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6209
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6970"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VHN55_10950"
     CDS             complement(<1..268)
                     /locus_tag="VHN55_10950"
                     /inference="COORDINATES: protein motif:HMM:NF014591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEX2804479.1"
                     /translation="MWISWRRALGGCRVETVPEPALRLRDRFSTRLSMALVLASSSAI
                     RSAMLAQAGVDFEAVPAGVDEAREKARHVDAGALASALGRAKALK"
     gene            462..1526
                     /gene="hemE"
                     /locus_tag="VHN55_10955"
     CDS             462..1526
                     /gene="hemE"
                     /locus_tag="VHN55_10955"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEX2804480.1"
                     /translation="MSRSPREADTADGSDKPLLSVLSGKRLGPPPMWLMRQAGRYLPE
                     YRQLRKDKGSFLELVYDSDAASDVTLQPLERFAFDAAILFSDILIVPFAIGQNLSFVA
                     GEGPRLTPPLAAADLDSLTPALTRFEPIYETVRKVKARLAPNVALIGFAGSPWTVATY
                     MVAGQGSRDQSESRRLGYSHPERLDSIIARIEDVTFNYLAGQIEAGAEVIQLFDSWAG
                     SLSPAQFDRWVIAPTARLVERLKAQFADVPVIGFPKGAGGKLRAYASETGIDLVGLDE
                     TVDPAWANKELPDGFPVQGNLDPLALLAGGEQMQAAVRRILDAFADRPHIFNLGHGIL
                     PDTPPAHVQELVAQVKGTNA"
     gene            1519..1971
                     /locus_tag="VHN55_10960"
     CDS             1519..1971
                     /locus_tag="VHN55_10960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004209205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEX2804481.1"
                     /translation="MPDLTGFLGSAYPWVLAAHVTFVIFWIAGLLLLPRFYVYHHEAA
                     PGSAEDRAWIERERRARTIILTPAIGAVWILGLLLAFNVDSFDEGWFHAKLALVIALS
                     AYQGWLGTYGKRLAAGKRTADTRTLRIMNEIPGIAAALIVVLVIVRPF"
     gene            2145..3401
                     /gene="rho"
                     /locus_tag="VHN55_10965"
     CDS             2145..3401
                     /gene="rho"
                     /locus_tag="VHN55_10965"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017671634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEX2804482.1"
                     /translation="MHLKDLKKKPPAELVTMAEELGVEGASTMRKQDLMFSILKVEAE
                     DGAQIIGNGTIEVLNDGFGFLRSPEANYLAGPDDIYVAPSVIRRFGLRTGDTVEGEIR
                     GPKDGERYFALTKITSINFDDPEAVRHRVNFDNLTPLYPDEKLTLDSADPTIKDKSAR
                     VIDIVSPQGKGQRALIVAPPRTGKTVLLQNIAKAITDNHPEVFLIVLLIDERPEEVTD
                     MQRSVNGEVISSTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNT
                     VVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSKMDEVIFEE
                     FKGTGNSEIVLDRKVSDKRIFPSLDVGKSGTRKEELLVDQATLTKMWVLRRILMQMGT
                     VDAMQFLLDKMKDAKSNEDFFASMNQ"
     gene            3452..4180
                     /locus_tag="VHN55_10970"
     CDS             3452..4180
                     /locus_tag="VHN55_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX2804483.1"
                     /translation="MIDMLLAAGAAHASEGFGGPAGIWNAIVHDFSNITEPAAFAAFL
                     QVLMIDLVLAGDNAIVVGALAAGLPAEQRRKVILIGVIAALVLRIAFALIVTQLLQIV
                     GLILVGGLLLMWVAWKMWRDLHHGGESGGSPEIHGDEHSGIRSAKSFAGAVWAVAIAD
                     VSMSLDNVLAVAGAARDHPGILIVGLVFAVALMGLAANVIAKYIDRYRWIAYVGLAVI
                     VYVALKMIYDGWVDPNVGLGKLFV"
     gene            4208..5491
                     /gene="mnmE"
                     /locus_tag="VHN55_10975"
     CDS             4208..5491
                     /gene="mnmE"
                     /locus_tag="VHN55_10975"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004209165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEX2804484.1"
                     /translation="MQPDTIFALSSGSPPAAISIIRVSGPGARKAAELLAGGLPPARE
                     AAVRQLRDPRLGQLLDDALVLRFDGPASSTGEDVVELHCHGGRAVVAAVLGALGETEG
                     LREAQPGEFTRRAFENGRIDLTEAEGLADLIEAETESQRRAALIMAEGGLRQQIDVWQ
                     ARVLELSARAETAIDYVDEDSGGKDRDLSSDCGALAIELGKWLDRPRSEPLREGVRVV
                     IAGPPNAGKSSLLNAIVGYDRAIVTDVPGTTRDHIEVPLALAGVPMRLIDTAGLRESA
                     ELVEKIGVDRAHSLIGLADVLVWLGEPGDAPEHARLVRVHARCDLPGRGPAPTGSIAV
                     SAKTGEGLARLTSWIADEARSLLPGEGEIALNRRQADCVAEARGALRAGGCSTDVVLV
                     AESLRQARLAFDRLTGAAGVEDLLDTLFARFCLGK"
     gene            5561..>6209
                     /locus_tag="VHN55_10980"
     CDS             5561..>6209
                     /locus_tag="VHN55_10980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008832533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX2804485.1"
                     /translation="MYDVLVIGGGHAGCEAAAAAARRGAHVGLVTYRADDVGQMSCNP
                     SIGGVGKGHLVRELDVFDGLMARAADRAAIHRRMLNRSKGPAVQGPRVQADRALYRAA
                     VRDLLAASGVELVVCEALRLVIRNGCVEGLATSSGTIGCKALVIATGTFLDARVFVGE
                     QVFEGGRRGERAATALGAQIREIGLGQGRLKTGTPPRLDGRTIDWSSLERQPSDDE"
BASE COUNT         1068 a         2006 c         2019 g         1116 t
ORIGIN      
        1 ccttcagggc cttggcccgg ccaagcgcgg aagccagggc gccggcgtcc acgtgccgag
       61 ccttctccct cgcttcgtcg acgcctgcgg gcacggcttc gaaatccact ccagcctggg
      121 cgagcatcgc gcttcggatc gcgctggagg aagcaaggac gagcgccatg gacaaccttg
      181 tggaaaagcg atcgcggagg cgtagcgcgg gttcggggac agtctcaacc cggcatccac
      241 ccagagcccg gcgccaggaa atccacattc catccccact gactcggatc gatccccagc
      301 ctgtgaatcg cgggggaggg caaaggcgac tcgccggatt tccgagcggt tcctgtcgcc
      361 gccgctgttg gcaaatccgg aaccgcgacg taagtcccgc gtccccccgc acaacaacag
      421 catcaatcag aatctaagaa tctattatag ggagagagtg ggtgtcccgt tcgccgcgag
      481 aggccgacac ggcggatggt tcggacaagc ccctgctctc cgtcctgagc ggaaagcggc
      541 tcggccctcc gccgatgtgg ctgatgcggc aggccggacg ctaccttccc gaatatcgcc
      601 agctccggaa ggacaagggg agctttctcg agctcgttta cgacagcgac gccgcctcgg
      661 acgtcaccct gcagccgctc gagcgattcg ctttcgacgc ggcgatcctg ttttcggaca
      721 tcctcatcgt cccgttcgcg atcggtcaga atttgagctt cgtcgccggc gaggggccgc
      781 gcctgacgcc gccgctggcc gcggccgatc tggactcgct cactccggcg cttacccgct
      841 tcgagcccat ctacgagacg gtccgcaagg tgaaggcgcg gctggctccg aacgttgcac
      901 tgatcggttt tgccggctcc ccgtggacgg ttgcgaccta catggtcgcc gggcagggca
      961 gccgagacca gtcggaatcg cggcgcctcg gatattcgca cccggagcgg ctcgattcca
     1021 tcattgcccg aatcgaggat gtgaccttca attatctcgc cggccaaatc gaagccggcg
     1081 ccgaggtcat ccagctattc gatagctggg ccggaagcct ttcaccggcg cagttcgacc
     1141 gctgggtgat cgcgcccacg gcgcgcctcg tcgagcggtt gaaggcgcaa ttcgctgacg
     1201 ttccggtcat tggctttccc aagggagcgg gcggcaagct gcgggcttat gcaagcgaaa
     1261 ccgggatcga ccttgtcggc ctcgacgaga cagtcgaccc tgcatgggcg aacaaggaac
     1321 tccccgacgg cttccccgtg cagggcaatc tcgacccgct ggcattgctt gccggcggcg
     1381 agcaaatgca ggccgccgtg cggcgcattc ttgacgcctt cgccgaccgt ccgcacatct
     1441 tcaacctcgg ccatggaatc cttccggata ccccgcccgc ccacgtccag gagctcgtgg
     1501 cgcaagtgaa agggacgaat gcctgacctg accggctttc tcggatccgc ttacccgtgg
     1561 gttctggcgg cgcacgtaac gttcgtcatc ttctggatcg cggggctgct gctgctcccg
     1621 cgcttctacg tctatcatca cgaggcggcg ccgggatccg ccgaggaccg tgcctggatc
     1681 gagcgcgagc gacgagcgcg gaccatcatc ctcaccccgg caatcggagc tgtgtggatc
     1741 ctgggcctgc tgctggcctt caacgtggat tcgttcgacg agggctggtt ccacgcgaag
     1801 ctcgcgctcg tgatcgccct gtcagcctat cagggctggc tgggcaccta tggaaagcgg
     1861 ctcgccgccg gcaagcggac ggcagacacg cgaacgcttc ggatcatgaa cgaaatcccc
     1921 ggcatcgccg cggctctgat cgttgtgctc gtcatcgtcc gcccgttctg aaattgccca
     1981 atcgcggacg attgactcgg gaccgggcgc tccctaactc gcgttcccag gctgtccggc
     2041 ctgttcttca ttgccctcgc cgtttcagct ttcgtccagc aggcggcgtt ctgccgccga
     2101 aggcttagaa actgagtcgt cccacgcccg aaaagcgaat ccacatgcat ctcaaagatc
     2161 tcaaaaagaa acccccggcc gagcttgtga cgatggccga ggagctcgga gtcgaaggcg
     2221 catcgacgat gcgcaagcag gacctgatgt tctcgatcct caaggtcgag gccgaggacg
     2281 gcgcccagat catcggcaac ggcaccatcg aggtcttgaa cgacggcttc gggttccttc
     2341 gctcgccgga agccaattat ctcgcagggc cggacgacat ttatgtcgct ccatcggtca
     2401 ttcgccgctt cggccttcgc accggcgata ccgtcgaggg cgagatccgc ggccccaagg
     2461 acggcgagcg ctatttcgct ctgaccaaga tcacgtcgat caacttcgac gatcccgaag
     2521 ccgtccgcca tcgtgtcaat ttcgacaacc tgaccccgct ctatcccgac gagaagctga
     2581 ccctcgacag cgccgacccg accatcaagg acaagtcggc gcgggtgatc gacatcgtgt
     2641 cgccacaggg caaggggcag cgcgcgctga tcgtcgctcc gccgcggacc ggcaagacgg
     2701 tgctcctcca gaacatcgcc aaggcgatca ccgacaacca tcccgaagtg ttcctgatcg
     2761 ttctcctgat cgacgagcgg cccgaggaag tcaccgacat gcaacgctcg gtgaacggcg
     2821 aagtgatcag ctcgaccttc gacgagccgg cgagccgcca cgtccaggtc gccgagatgg
     2881 tgatcgagaa ggccaagcgc ctcgtcgagc acaagaagga tgtcgtcatc ctgctcgatt
     2941 ccatcactcg cctcggccgc gcctacaaca cggtcgtgcc gagctcgggc aaggtgctga
     3001 ccggcggcgt cgatgccaat gcgctgcagc gcccgaagcg cttcttcggc gccgcccgca
     3061 acatcgagga aggcgggtcg ctttcgatca ttgccaccgc gctgatcgac accggatcga
     3121 agatggacga ggtcatcttc gaggagttca agggcaccgg caattccgaa atcgtgcttg
     3181 accgcaaggt ttccgacaag cgcatcttcc cgtcgctcga tgtcggcaag tccggcaccc
     3241 gcaaggaaga gctgctggtc gaccaggcta cgctcaccaa gatgtgggtg cttcgccgga
     3301 tcctgatgca gatgggcacg gtcgacgcga tgcagtttct tctcgacaag atgaaggatg
     3361 ccaagtcgaa cgaggacttc ttcgcctcga tgaaccagta ggctggtggc ccgttagctg
     3421 acgggacgag attacgggga ctgcgctgac aatgatcgac atgttgctag ccgccggtgc
     3481 ggcccacgct tcggagggct tcggcgggcc ggccggcatc tggaacgcga tcgtccacga
     3541 tttttcgaac atcaccgagc cggcggcctt tgccgcgttc ctgcaggtgc tgatgatcga
     3601 cctcgtgctg gccggcgaca atgcgatcgt cgtcggcgcg ctcgccgccg ggcttccggc
     3661 cgaacagcgc cgcaaggtca tcctgatcgg tgtcatcgcg gctctcgtcc tccgcatcgc
     3721 cttcgcgctg atagtaaccc aattgctgca aatcgttggc ctgatcctcg tcggcggact
     3781 gctgctgatg tgggtcgcct ggaagatgtg gcgcgacctt catcatggcg gcgaaagcgg
     3841 cggctcgcct gaaatccatg gcgacgagca ttcagggatt cgctccgcca aaagctttgc
     3901 gggcgcggta tgggcggtcg cgatcgccga tgtttcgatg agcctcgaca acgtgctcgc
     3961 ggtcgccggc gcggcgcgcg atcatccggg aatcctgatc gtcggcctgg tcttcgccgt
     4021 ggctctgatg ggcctcgcgg ccaatgtcat cgccaagtac atcgatcggt accgctggat
     4081 cgcttacgtc ggccttgcgg tgatcgtcta tgttgcgctg aagatgattt acgacggctg
     4141 ggtcgacccg aacgtcgggc tcggcaagct gttcgtttga tcgggccgct gcgctaagcg
     4201 cggagccgtg cagccggaca ccatcttcgc gctctccagc ggaagcccac ccgccgcgat
     4261 ctcgatcatc cgggtcagcg gaccgggcgc gcgaaaggcg gccgaattgc tcgccggggg
     4321 tctgccgccc gctcgcgagg ccgcagttcg ccagcttcgc gatccgcggc tgggacagct
     4381 tctcgacgat gccctcgtgc ttcggttcga cggcccggca agctcgactg gcgaggacgt
     4441 ggtcgaattg cattgtcacg gcggccgtgc ggtcgttgca gcggtgctcg gcgctcttgg
     4501 ggaaaccgag ggcctgcggg aggcgcagcc tggcgaattc actcggcgcg cgttcgagaa
     4561 tgggcggatc gacctcaccg aggcagaagg ccttgccgac ctcatcgagg cggagacgga
     4621 aagccagcgg cgagccgcgt tgattatggc cgagggcggg cttcgccagc agatcgacgt
     4681 gtggcaggca cgcgtcctcg agctttccgc gcgtgccgaa actgcgatcg actatgtcga
     4741 tgaagactcc gggggaaagg atcgcgatct gtccagcgat tgcggcgcat tagcaataga
     4801 gctggggaaa tggcttgatc ggccgcgctc ggaaccgctt cgcgaaggcg tccgagtggt
     4861 gatcgctggt cctcccaatg cggggaagtc aagccttctc aacgccatag taggatatga
     4921 ccgggctatt gtgacggatg ttcccggaac aacccgcgat catattgaag tcccgctggc
     4981 gctcgctgga gtcccgatgc ggttgatcga tacggcaggc ctgcgcgagt ccgcggagct
     5041 ggtggagaag atcggagtcg accgggccca tagcctgatt ggccttgccg atgtcctcgt
     5101 ctggctcggc gagccaggcg acgctccgga acatgcccgc ctcgtccgcg tgcacgctcg
     5161 gtgcgacctg ccgggccgag ggccggcgcc cacaggttcg atcgcggtct cggccaaaac
     5221 cggggaggga ctggcccggc tcacctcctg gatcgcggac gaggcccgct cgctgcttcc
     5281 aggcgaaggc gagatcgcat tgaaccggcg ccaagccgat tgcgttgccg aggcgcgggg
     5341 cgctctccgg gcgggcggat gttccaccga cgtggtcctc gtcgccgaat cgcttcgcca
     5401 ggcccggctc gctttcgacc gtctcacggg cgccgccggg gtggaggacc tgctcgacac
     5461 gctgttcgcc cggttctgcc tgggcaaata agatggggcg tttcacgtga aacgcagcca
     5521 ggttttgacc gcctcactat cgttaccgta aggcgcccct atgtacgacg ttcttgtcat
     5581 cggtggcggc cacgccggtt gcgaggcggc ggccgcagcg gcgcggcgcg gcgctcacgt
     5641 gggacttgtg acctatcgcg ccgatgatgt cggccagatg tcatgcaatc cctcgatcgg
     5701 cggggtcggc aaggggcatt tggtccgcga gctcgatgtc ttcgacggcc ttatggcccg
     5761 cgccgcagat cgggcagcaa tccaccggcg gatgctcaat cgcagcaagg gaccggcggt
     5821 ccagggcccc cgcgtacagg cggatcgggc gctctacaga gccgccgtcc gcgacctatt
     5881 ggccgcgagc ggggtcgagt tggtcgtttg cgaagcattg cggctcgtga tccgcaacgg
     5941 ctgcgtcgag ggtttggcga ctagctccgg gacgatcggg tgcaaggcgt tggtgatcgc
     6001 caccgggacc tttctcgatg cgcgggtctt cgtgggcgag caggtgttcg aaggcggccg
     6061 gcgcggggaa cgagccgcca cggcgcttgg cgcgcagata cgtgagatcg gcctggggca
     6121 ggggcggctc aagacgggaa ccccgccgcg gctcgatggg cgtaccatcg attggtcgag
     6181 tcttgagcgg cagcccagcg acgacgagc
//
LOCUS       DATAKH010000260         8003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_14951,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000260 DATAKH010000000
VERSION     DATAKH010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8003
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14951"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VHN55_10985"
     CDS             <1..754
                     /locus_tag="VHN55_10985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004207279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX2804486.1"
                     /translation="TGAMLIDTFLLAVVLSSLWKWPRWASWPLLATFFLVDTTYFAAN
                     LTKVPNGGWFPLLVGLIGFTVLTTWSRGRKLMLDRMEEASLPMPIFIKSAATSATRVP
                     GTAVFMTTSPEGVPHSLLHNLKHNKVLHERVFLVTIRIEDVPFIHTGERAAVKDYGSG
                     FYRIILRHGFMEEIDVPAALAKVKGVGPTCKTMDTSFFLARQTLLPAARPAMPLWREK
                     LFAWMLRNAQSAMEFFKLPPNRVIELGSQVEI"
     gene            761..1261
                     /locus_tag="VHN55_10990"
     CDS             761..1261
                     /locus_tag="VHN55_10990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015456932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-5' RNA ligase family protein"
                     /protein_id="HEX2804487.1"
                     /translation="MPGALIVMAEIDKSDFAWLDALRRLHYPADRNRVPAHLTLFRTL
                     PPSAEDEVRRSLARAASASAPDAEIAGVMDLDSGVALRISSPALGAIRDDLAEEFRGL
                     LTPQDLGRWTPHVTIQNKVEARVARALLRELRSDFEPRPLAVAGLQLNRYLDGQWEPL
                     GSWRFR"
     gene            complement(1258..1686)
                     /locus_tag="VHN55_10995"
     CDS             complement(1258..1686)
                     /locus_tag="VHN55_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008603566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3775 domain-containing protein"
                     /protein_id="HEX2804488.1"
                     /translation="MDPATPLETLCRIVLRAREYEAQTPSDYDPDEAADNVDDEDEGS
                     LSVLDDSINDSVEEELRSILEDLGEDQLMEVLAFCWVGAGNYEASDWNEALQEAQEMH
                     DDGGTETVIDELLEMPMLPSVLEAGLAAFDLSCDGIGELT"
     gene            1853..1929
                     /locus_tag="VHN55_11000"
     tRNA            1853..1929
                     /locus_tag="VHN55_11000"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1887..1889,aa:Met,seq:cat)
     gene            2244..3566
                     /locus_tag="VHN55_11005"
     CDS             2244..3566
                     /locus_tag="VHN55_11005"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012048563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEX2804489.1"
                     /translation="MRFSRAFLPVLKESPSDAQIVSHKLMLRAGLVRQTSAGIYAWLP
                     VGLRVLQKIEQIVREEQDRAGAQEILMPTIQSAELWRESGRYDAYGPEMLRIRDRHDR
                     EMLYGPTNEEMLTAIVRDELKSYRDLPRTLYHIQWKFRDEVRPRFGVMRGREFLMKDA
                     YSFDVDEAGARLSYYTQLLAYLRTFSRMGIRAVPMAAASGPIGGDLSHEFIVLAPTGE
                     SEVYYDAAFDEMDWSGSELRYDDAAGLHSLFSDVSSTYAATDETHDEKKWAEISEERR
                     RTGRGIEVGHIFYFGDKYSAPMGLKVSGPDGQMVTPMMGSYGIGVSRLVAAIIEASHD
                     EAGIIWPDSVAPWAVGIVTMRQDDEATVAAAEDLYEKLQNAVVEVLYDDRDERGGVKL
                     GTMDLIGLPWQVVVGPRGIANGVVELKRRSTGEREEVSVESALARLAA"
     gene            3563..4813
                     /locus_tag="VHN55_11010"
     CDS             3563..4813
                     /locus_tag="VHN55_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010337348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEX2804490.1"
                     /translation="MILNSYERMVARRYLLPGKGEGFIFLVASISLVAVALGVAALII
                     VMSVMNGFRAELFDKITGLNGHAIVQGYEGQLQDWQRIAETARKLPGVTSATPLIEQP
                     LMASSNGRVEGVLVRGMRLEDIQNNPVIAGNVKSGDLRLVTPDNDRVAIGSRLAEALG
                     AYPGSSISLISPEGRSTVVGTVPRIVSYTVAAVFEVGIYDYDNSFVIMPMQDAQKLLL
                     IGDSVSTIKLQTTNPDRVDSILAPLQPLVQGNGVLIDWKEMNSALFEALEIERVAMFI
                     VLSLIVLVAVFNILSSLIMLVRAKTRDIAILRTMGASQRGMMKVFVTVGVTIGSLGIV
                     LGLILGSIFLFFRQGVVNAIQYLTGQNLWDPSVRFLSDLPAKTDVVEVTAIVLTALVL
                     SFLATLYPAWKAASTDPVQVLRYE"
     gene            4806..5480
                     /locus_tag="VHN55_11015"
     CDS             4806..5480
                     /locus_tag="VHN55_11015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX2804491.1"
                     /translation="MSEPVLETRGLKRSFTQGEVTIEVLRGVDLKVMPGEIVALLGPS
                     GSGKSTLLQAVGLLEGGFEGSIRLQGREASELDDAGRTQTRRELLGFVYQFHHLLPEF
                     NASENVVLPQLVRGAGKEAAKARADGLLTTLGLKDRLEHRPSKLSGGEQQRVAVARAL
                     ANRPPLILADEPTGNLDEATADTVFGEFLNLVRGERSAALVATHNERLAKKMDRVLRL
                     HEGVLE"
     gene            5480..6409
                     /locus_tag="VHN55_11020"
     CDS             5480..6409
                     /locus_tag="VHN55_11020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804492.1"
                     /translation="MEDESEIGETKVERRKRFNRWLIVALVAAVLAGILLASSVWDTG
                     IKGSENAIETNEAASADADPQAWCAAQSTYDAIRRELFRRAAGVRGSDEQAYARLADF
                     ALLRISGPIVRGVDDRLNSVTCSGTAVLGLPPGVAVAGGRRSLSGDLDYMVQPAADGT
                     GNVVRLGNADSIVVPLATVSRTRAAEPTAPAELPDLENEVTEDQTELPDQMEQPQPMQ
                     ANPSFDCDDARSRSEIAVCNDPGLASLDRQMAAQFNRAMMEADRGQRRLLERTRDRFL
                     SYRNRCSNNECIANTYRSRMREISDIVADRWRG"
     gene            6514..>8003
                     /gene="dnaE"
                     /locus_tag="VHN55_11025"
     CDS             6514..>8003
                     /gene="dnaE"
                     /locus_tag="VHN55_11025"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015459881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX2804493.1"
                     /translation="MLEGAMEPKAIAAQAAKLGFPAVALTDRNGLYAAMPFTEACIGK
                     GVQPVIGAALAVARPSDLGEAIDWLVLLAKDEQGYSNLCKLVSAAHLDRPLSEQPHVA
                     FDKLEGLNEGLIALTAGAEGALARLLADGQSAKAEAYLDRLQALFADRLYVELVRRGD
                     PVEEAAEEALIDLAYDRGLPLVATNPAAYIDPSFHAAHDAMLCIAAGEYVESADRSAT
                     SSPEAWLKSGPMMAELFADIPEAIANTAVVARRCAVGAPKRSPILPRLGEDEDEQLRR
                     DSGAGLEARLSGRSDEDRQAYLERLDYELDIIINMGFAGYFLIVADFIKWAKANDIPV
                     GPGRGSGAGSVVAWALTITDLDPIALDLLFERFLNPERVSMPDFDIDFCETHRDKVIA
                     YVQQRYGRDKVAQIITFGRLKARAVLKDTGRVLQMSYGQVDRLAKLIPNHPTDPWTLE
                     RSLNGVSELAAEYKGGPDVKRLFDLAMKLEGLPRHASTHAAGVVIG"
BASE COUNT         1435 a         2551 c         2557 g         1460 t
ORIGIN      
        1 gacgggggcg atgctaatcg acaccttcct gctggcggtg gtcctctcgt cgctgtggaa
       61 atggccgcgc tgggcatcat ggccgcttct cgccaccttc ttcctggtcg acacgacata
      121 ctttgccgca aacctgacca aggtgccgaa cggcggctgg ttcccgctat tggtcggtct
      181 gatcgggttc accgtcctca ccacatggtc tcggggccgc aagctcatgc tcgaccgaat
      241 ggaagaggca tcccttccaa tgcctatttt catcaagtct gcagcgacga gcgccactcg
      301 ggtccccggc accgctgtgt tcatgacgac gagcccggaa ggtgtgccgc actcgctgct
      361 ccacaacctg aagcacaata aggtgctgca tgagcgggta ttcctcgtga ccattcgaat
      421 cgaagatgtg cccttcatcc acaccggcga aagggcggcg gtgaaggact acggttcggg
      481 cttttaccgg atcatattgc ggcacggctt catggaggaa atcgacgtgc ccgccgctct
      541 ggcaaaggtc aaaggcgtcg gtccaacctg caaaacgatg gacaccagct tcttcttggc
      601 tcgacagacc ctgcttcccg ccgccaggcc cgccatgccg ctctggcgcg agaagctgtt
      661 tgcgtggatg cttcgcaatg cccagagcgc aatggaattt ttcaagcttc cgcccaatcg
      721 cgtgatcgaa ctgggaagcc aggtcgagat ctgaggcggc atgcccggcg cgctcatcgt
      781 gatggcggag atcgacaagt ccgacttcgc ctggctcgac gcgcttcggc ggctccatta
      841 ccccgccgac cgcaatcgcg tgcccgcgca tttgacgttg ttccgaactt tgcctccttc
      901 agccgaggac gaggttcgcc gaagtctcgc tcgagccgcg tctgcttctg ctcccgacgc
      961 cgagattgcg ggcgtgatgg acctcgacag cggcgtcgcg cttcgaatct cctcgccagc
     1021 gctgggagct attcgcgacg atcttgccga agagttccgc ggcctgttga caccgcagga
     1081 cctggggcgc tggactccgc acgtgacgat ccagaacaag gtcgaggcgc gcgtcgcccg
     1141 ggcactgctt cgcgagttaa ggtcggactt cgagccccgg ccgcttgccg tcgccggtct
     1201 ccagctcaac cgctatttgg atggccagtg ggagccgctg gggagctggc gcttccgtta
     1261 ggtaagctcg ccgatcccgt cgcagctgag gtcgaaggcc gcgagcccgg cttcgagcac
     1321 ggagggaagc atcggcattt cgagaagctc gtcgatcaca gtctcggtgc cgccgtcgtc
     1381 gtgcatctcc tgcgcttcct ggagagcttc gttccagtcg gaagcctcgt aattgccggc
     1441 gcctacccag cagaaggcga gaacttccat cagctggtcc tcgccgaggt cttcgaggat
     1501 cgaacgaagc tcctcctcga cgctatcgtt gatcgaatcg tcgaggaccg acagcgatcc
     1561 ttcgtcttcg tcatcgacat tgtcggccgc ctcgtcggga tcgtagtcgc tgggggtctg
     1621 cgcttcatat tctcgcgctc gcaggacaat ccggcagagg gtctctaggg gtgttgcagg
     1681 gtccatcaaa tgtctctcgt gctgatcggc tcaacgtgat cagccgttac cggttcctgc
     1741 aagtcgctcg ttcgttgacc ggcccactcg ccgctcttat atcgccgccc gcgcccggct
     1801 tcgggcgcag gcttccaggc agatgcggcc gcgcccgcgc ggcctttggt ggggcggagt
     1861 agctcagctg gttagagcag cggaatcata atccgcgtgt cgggggttca agtccctcct
     1921 ccgctaccaa cccgtcatcg ggccttcaaa agcaaacgcc cggaccgcat tgcgatccgg
     1981 gcgtcctgcg tgacgattgc tcgtcagccc ccttaacatg tctccgccgt ctttcgagcg
     2041 gccccgaaca tcgcccgagg gcggaagcat tcggcacgga tcggagctaa accgcatttg
     2101 cagcgcttgt caccccggca tggccgtcat cgaggctttt gcgccgacgc tgtggcgggc
     2161 ccgccacaga ttgcttcacg ttgcgttgcg ctgtcgagca ccttagggct tcggccgcaa
     2221 acagccattt cgaggaacca aacttgcgat tttcccgcgc ttttctgccg gtcttgaagg
     2281 aaagcccctc ggatgcgcag atcgtcagcc acaagctgat gctccgcgcc ggcctcgtca
     2341 ggcagacttc cgccggaatt tacgcgtggc tcccggtcgg ccttcgagtc ctccagaaga
     2401 tcgagcagat cgttcgcgag gagcaggatc gcgccggcgc ccaggaaatc ctgatgccga
     2461 cgatccagtc ggcagaactg tggcgcgaga gcggccgtta cgatgcctac ggcccagaaa
     2521 tgctgcgaat acgcgaccgg cacgaccgcg agatgctcta cggtccgacc aacgaggaaa
     2581 tgctgaccgc gatcgtccgc gacgagctca agagctatcg cgaccttccg cgaacgctct
     2641 accacataca gtggaaattc agggacgagg tgcgaccgcg cttcggagtg atgcgcggcc
     2701 gcgaattcct tatgaaggac gcctacagct tcgatgtcga cgaggcgggg gcgcggctga
     2761 gctattacac gcagctgctt gcctatctgc gcaccttttc gaggatgggc attcgagccg
     2821 ttccgatggc ggccgcgtcc ggaccgatcg gcggcgatct cagccacgag ttcatcgtcc
     2881 tcgctccgac cggcgaaagc gaggtctatt acgacgccgc cttcgacgag atggactgga
     2941 gtgggtccga gcttcgctac gacgatgccg ccgggcttca cagcctcttc agcgacgtca
     3001 gctcgaccta tgcagcgacc gatgaaaccc acgatgaaaa aaagtgggcg gaaatctcgg
     3061 aggagcgccg gcggaccggc cgcgggatcg aggtcggcca catcttctac ttcggcgaca
     3121 aatattcggc gccgatgggg ctgaaggtct ccggcccgga cggccagatg gtcacgccta
     3181 tgatgggcag ctacggaatc ggcgtgtcgc ggctggtcgc cgccatcatt gaggcgagcc
     3241 acgacgaggc gggaatcatc tggccggact cggtagctcc gtgggcggtc ggaatcgtca
     3301 ccatgcgtca ggacgatgaa gcgaccgtcg ccgcggccga ggacctctac gagaagctgc
     3361 aaaatgcggt ggtcgaagtt ctctacgacg accgcgacga gcgcggcgga gtgaagctgg
     3421 ggacgatgga cctgatcggg ctgccctggc aggtcgtcgt cggtccgcgc gggatcgcga
     3481 acggggtggt tgaactgaag cggcgttcga ccggggaacg cgaggaagtc agcgtggaat
     3541 cggccctcgc gaggctggcg gcatgatcct caactcctac gagcggatgg tcgctcgccg
     3601 ctacctgctt cccggcaagg gcgaggggtt catcttcctc gtcgcctcga tcagcctggt
     3661 cgcggtcgcg ctcggggtcg cggcgctgat catcgtgatg agcgtgatga acggcttccg
     3721 cgccgagctg ttcgacaaga tcaccggcct caacggccac gcaattgttc agggctatga
     3781 gggccagctg caggactggc agcggattgc cgaaacggcg cgcaagcttc ccggagtaac
     3841 ctcggcgact ccgctgatcg agcaaccgct gatggcctct tcaaacggcc gcgtcgaagg
     3901 cgtgctggtt cgcggaatgc ggttggagga tattcagaac aacccggtga tcgccggcaa
     3961 cgtcaagtcc ggcgacctgc ggctggtgac acctgacaac gaccgggtgg cgatcggatc
     4021 gcggctcgcc gaagcgctcg gcgcctaccc cggaagctcg attagcctga tcagccccga
     4081 aggccgatcg acggtggttg ggacggttcc caggatcgtc tcctacaccg tcgccgcggt
     4141 gttcgaggtc ggaatctacg actatgacaa cagcttcgtc atcatgccga tgcaggacgc
     4201 acagaagctg ctgctgatcg gcgacagcgt cagcacgatc aagcttcaga cgaccaatcc
     4261 cgaccgcgtc gattccattc tcgcgccgtt gcagccgctc gtgcagggca acggcgttct
     4321 gatcgactgg aaggaaatga actcggcgct gttcgaggcc ctggagatcg agcgtgtggc
     4381 aatgttcatc gtgctttcgc tgatcgtgct cgttgcagtg ttcaacatcc tctcatcgtt
     4441 gatcatgctg gtccgggcca agacccgcga cattgcgatc ctccggacga tgggcgccag
     4501 ccagcgcggc atgatgaagg tgttcgtcac cgtcggagtg acaatcggct cgctggggat
     4561 cgtgctcggg ctgatcctcg gatcgatctt cctgtttttc cggcaggggg tagtgaacgc
     4621 gatccagtat ctcaccggcc agaacctgtg ggacccgtcg gtccgattcc tttccgactt
     4681 gccggccaag acggacgtgg tggaagtcac cgccatcgtc ctgaccgcgc tggtgctatc
     4741 gttcctcgct acgctctacc ccgcgtggaa ggcggcaagc accgatccgg tgcaggtgct
     4801 ccgctatgag tgagccggtt ctcgaaaccc gcggcctgaa gcgcagcttt acccaggggg
     4861 aagtgacgat cgaggtcctt cgcggcgtcg atctcaaggt gatgcccggt gagatcgtgg
     4921 cgctgctggg cccgtcggga tcgggcaagt cgaccctgct gcaggcggtg gggctgcttg
     4981 agggcgggtt cgaggggtcg atccggctgc aagggcgcga agcgtccgag cttgacgatg
     5041 ccggccgaac ccagacccgg cgcgagctgc tcggcttcgt ctatcagttc catcacttgc
     5101 tccccgaatt caacgcgagc gagaatgtcg tactccccca gctcgtccgc ggcgccggga
     5161 aggaggcggc gaaggcgcgt gccgatggct tgctgacgac gctgggtctc aaggaccggc
     5221 tcgagcaccg cccgtcaaag ctttccggcg gcgagcagca gcgcgttgcc gttgcccgcg
     5281 cccttgccaa ccgcccgccg ctgatccttg ccgacgaacc gaccggcaat ctcgacgagg
     5341 cgaccgccga caccgttttc ggggagttct tgaatctggt ccgaggtgaa cggagcgcgg
     5401 ccctggtggc gacccataac gaacggctgg cgaagaagat ggatcgagtg ctccggctcc
     5461 acgaaggcgt gctagaataa tggaagacga aagcgagatc ggcgaaacca aggttgagcg
     5521 ccgcaagcgc ttcaaccgct ggctgatcgt ggcgctagtc gctgcggtgc tcgcgggaat
     5581 cctgctcgca agctcggttt gggacaccgg catcaagggc agcgaaaacg cgatcgaaac
     5641 caatgaagct gcctcggcag acgcggatcc ccaggcatgg tgcgcggccc agtcgaccta
     5701 cgatgcgatc aggcgcgagc tgttccggcg ggccgccgga gtccgcggaa gcgacgagca
     5761 ggcctatgcg cgcctcgccg atttcgcgct gctgcggatc agcgggccga tcgtccgggg
     5821 agtcgacgat cgcctgaaca gtgtgacctg cagcgggact gcggttcttg gcctcccgcc
     5881 cggagtggcc gtcgcaggtg ggcggaggtc gctgtccggc gatctcgatt acatggtcca
     5941 gcccgccgct gacggcaccg gcaatgtcgt tcgcctcggc aacgccgatt cgatcgttgt
     6001 tccgcttgcg accgtgtcac gcactcgcgc agctgagccg actgcgccgg ccgagcttcc
     6061 cgatctcgaa aacgaggtaa ccgaagacca gactgagctg ccggatcaga tggaacagcc
     6121 ccagccgatg caggccaacc caagcttcga ttgcgacgat gcccgctcga ggagcgaaat
     6181 cgccgtctgc aacgatcccg gcctcgccag cctcgaccgg caaatggcgg cccagttcaa
     6241 ccgcgcgatg atggaggcgg accgaggaca gcggcggctc ctggaacgta cccgcgatcg
     6301 cttcctgtcg taccgaaacc gctgctccaa caacgagtgt atcgccaaca cctaccgaag
     6361 ccggatgcgg gagatcagcg acatcgtcgc cgaccgctgg cgcggctagt tggggataag
     6421 tggcaaaagc cgctttcgtg ccgcctgctg tgaccgcata gttgccgagt gaccggtccc
     6481 tacgttcctc ttcgagtctt ctcctgcttc acgatgctgg aaggcgcgat ggagccgaaa
     6541 gcaatcgccg cgcaggcggc gaagctcggc tttccagccg tcgcgctgac cgaccgcaac
     6601 ggcctctatg cggccatgcc gttcaccgag gcctgcatcg gcaaaggcgt gcagccggtc
     6661 atcggagccg cgctcgcggt cgcgaggcca tcggaccttg gggaagcgat cgactggctc
     6721 gtgctgctgg ccaaggacga gcagggctat tccaacctgt gcaagctggt ctccgctgca
     6781 cacctcgacc gcccgctaag cgagcagccg catgtcgcgt tcgacaagct ggaggggctc
     6841 aatgaaggat tgatcgcgct gacggcgggc gccgagggcg ctttggcgcg cctgcttgcc
     6901 gacggccagt cggccaaggc ggaagcctat ctcgaccggc tgcaggcgct gtttgcggac
     6961 cgcctctatg tcgaactggt ccgccgcggc gatccggtcg aggaagcggc ggaagaggcg
     7021 ctgatcgacc ttgcgtacga tcgaggtctg ccgctcgttg cgaccaatcc cgcagcctat
     7081 atcgatccga gcttccacgc cgcccacgac gcgatgctgt gcatcgccgc cggcgaatat
     7141 gtcgagagcg cggaccgaag cgcgacttcc tcgcccgaag cgtggttgaa gagcgggccg
     7201 atgatggcgg aactgttcgc cgacattccc gaggccattg ccaataccgc agtcgtcgcc
     7261 cggcgctgcg ccgtcggcgc tccgaagcga agcccgatcc ttccgcggct cggagaagac
     7321 gaagacgagc agcttcggcg ggattctggg gcgggcctgg aagcgcggct gtcagggcgc
     7381 agcgacgagg accgccaagc ctatctcgag cggctcgatt acgagctcga catcatcatc
     7441 aacatgggct tcgcaggcta tttcctgatc gtcgccgatt tcatcaaatg ggcgaaggcg
     7501 aacgacattc ccgtcggtcc tggccgtgga tccggcgccg gctcggtcgt ggcctgggcg
     7561 ctgacaatca ccgatctcga cccgatcgcc ctcgacctgc tgttcgagcg cttcctcaat
     7621 cccgagcgcg tatcgatgcc ggacttcgac atcgatttct gtgaaacgca tcgcgacaag
     7681 gtcatcgcct acgtccagca gcggtatggc cgggacaagg tcgcccagat catcaccttc
     7741 ggacgcttga aggcgcgcgc cgtgctcaag gacactgggc gagtccttca gatgagctat
     7801 ggtcaggtcg accgcctcgc caagctgatt cccaaccacc cgaccgaccc ctggacactg
     7861 gagcggtcgc taaacggcgt ttccgagctg gccgccgaat ataagggcgg accggacgtc
     7921 aagcgactgt tcgacctggc catgaagctg gaagggcttc cgcgccatgc ctcgacccac
     7981 gccgccggag tggtgatcgg cga
//
LOCUS       DATAKH010000261         6725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_14969,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000261 DATAKH010000000
VERSION     DATAKH010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 6725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6725
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14969"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VHN55_11030"
     CDS             complement(<1..378)
                     /locus_tag="VHN55_11030"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEX2804494.1"
                     /translation="MAEPHLVAETHAPATEHHEQPELLGITAPMWIALAMIVVLAILV
                     WQKVPGAIGKALDKKIGGIREQLAEAEALRKEAEALKAEYAAKAAQAESEAAAMVERA
                     RHEADAMIEKARQDADALVERRAR"
     gene            complement(371..862)
                     /locus_tag="VHN55_11035"
     CDS             complement(371..862)
                     /locus_tag="VHN55_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003044101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEX2804495.1"
                     /translation="MPQITQLPVIFWSQLFWLAIIFGAIFFVIGRGMVPKIQGVVADR
                     DRKISEDLERAQKARDEAETTEAEYRQRMEVSRAEAMKLALQAKQDGAREAEERTRAV
                     DSEAAKKIDKAEARIRKSVEKAMAEIDSVAADAARDLVAKLTGKQVTEQQALKAVKAV
                     TNG"
     gene            complement(898..1125)
                     /locus_tag="VHN55_11040"
     CDS             complement(898..1125)
                     /locus_tag="VHN55_11040"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012050658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEX2804496.1"
                     /translation="MDFQSAQVIGAGLAAIGVGAAAVGVGNVFGSFLESALRNPAAAD
                     GQQGRLFIGFAAAELLGLIAFAVAMIILYAR"
     gene            complement(1158..1961)
                     /locus_tag="VHN55_11045"
     CDS             complement(1158..1961)
                     /locus_tag="VHN55_11045"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004207393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEX2804497.1"
                     /translation="MAAEGKIDPMHQFTVEPLVPLHIGPYDVSFTNSAAWMLAALAII
                     GLFMWGGMKRQVVPGRWQMAVEGLTGFIDDMVSVNIGPNGKKYTPYIFSLFTFILVCN
                     LLGLMPFAIVPGWHPFTPTSHFSITGVLAVLSFSIVLIVGFAKHKLHFFSLFVPHGTP
                     IVMVPLIAVIEFISFMVRPFSLGLRLFVAMIAGHILMEVFGSFIISAGDTFASAPASG
                     GGVMGLLVSAISFLFIVGVSALELLVAAIQAYVFALLTTLYLNDAENLH"
     gene            complement(1976..2308)
                     /locus_tag="VHN55_11050"
     CDS             complement(1976..2308)
                     /locus_tag="VHN55_11050"
                     /inference="COORDINATES: protein motif:HMM:NF021073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEX2804498.1"
                     /translation="MAADEPHQDPELPQDARLGSLEERLGRMQQEEARRAARATPNPT
                     TRVWQLMFSHLVGAPAGGGILGWGLDSLFGTFPLFFLLMLFLGFGVGVVNVLRISKTS
                     SGSGPDAS"
     gene            complement(2467..2844)
                     /locus_tag="VHN55_11055"
     CDS             complement(2467..2844)
                     /locus_tag="VHN55_11055"
                     /inference="COORDINATES: protein motif:HMM:NF018701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HEX2804499.1"
                     /translation="MRFVRVLFPVMLFGAVSAAVAQTSPQMTAARQAGVVGERYDGYL
                     GFASNASAAVQREAGAVNIKRRSLYTGLAARRNATVQEVGIAAGCELLGQVKVGESYM
                     LSDGEWRRRAAGQPVPVPGYCSR"
     gene            complement(2841..3056)
                     /locus_tag="VHN55_11060"
     CDS             complement(2841..3056)
                     /locus_tag="VHN55_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013933866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HEX2804500.1"
                     /translation="MTSQTIKRGLRLLAGAAMAVPLASCITVKAPEKPIEINLNVDIR
                     QEVLVRLQQDVQQLIRQNPEAFPGGSQ"
     gene            complement(3053..6307)
                     /locus_tag="VHN55_11065"
     CDS             complement(3053..6307)
                     /locus_tag="VHN55_11065"
                     /inference="COORDINATES: protein motif:HMM:NF023167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH domain-containing protein"
                     /protein_id="HEX2804501.1"
                     /translation="MAQVPDQSGDYHDGDVIVVKRHRLRKILTWVGIGALIVIAVALV
                     ILWVERRPIARNLIDRELSSRGVDASYTLDRVGLRTQQISNLRIGDPDNPDVTARRVL
                     IQMRLQWNGSIDVYRIVARGVRLRGRVLKDGTVSWGEIDKLLPPPEPGPKKPFTLPDV
                     ALDIADSSIALATPWGAIGFAVRGNGNLTGGFKGRFVSSSPQLVTGNCAAANVRGAAA
                     IEVKARRPHVVGPLTANQFACPKSRFSIVQPRLELDAFFGEAFDNYDANARIISQVLT
                     AGDNGLAALNGRISLAGDLVDATGNVDLAAQGSRLGTITADRTRVQGRYRLKTTAGSL
                     IMVGRYSANGAALAPSMISGLTGALEATKATPIGPVASAIGNAIAKSARSFDVAGGIR
                     LVNFPGYGATRVTDATVRTATGGRARITGGKGITYHWPKGALRFDGTIAMTGGGLPTG
                     SVTLHQAANGAMTGVGNFQPYTVGGSRLSLSTLRFNAEPSGATRFSTVANLSGNFPGG
                     QVRNFNLPISGRVAANGGIAVGEECMVVSWDYLKMQQIQLARTRLPVCPTGPAIVSRS
                     PGGALHVGGRISNPSLAGRIGSAPMRLRASSILLDQGGFNGTGVALRLGDPDSPVALN
                     AGRLRGNFTRGGATGTLADADAVIANVPLKMTQIDGRWRFIDNRLTIDGGLFVEDRAD
                     PPRFYPLKSNDVHFVMANNRITTTGSLRHPGTGTLVTDVDIDHNLDSGAGHANLDVPG
                     IPFGPNLQPDELTPLTEGVVALVQGTLRGNGRIDWAGSGQVTSTGDFFTQNTDLAAPF
                     GPVEGLTTSVHFTDLLGLESAPGQVASIRRINPGIIVENGVLRYQLLPDQLVKIERGE
                     WPFMGGRLILQQTILNFGSNAPKRLTFELQGFDAKMFIDSLGFEGLEITGTFDGVLPM
                     IFDESGGRIVGGRLESRPPGGAFRYTGTKPDAGLFAGVAFDLLSDIRYRHMVVRLDGD
                     LAGEFATRFTIEQITLGTEGGFIAGLVRGAFKNVPMVVNLNINGPFRALIQMAKAFKD
                     PTTVIAPVMPFPLDAPGIVTEVRTLRKNEDQDRTTPVDEVDVSTEPPPESEATP"
     gene            6425..>6725
                     /locus_tag="VHN55_11070"
     CDS             6425..>6725
                     /locus_tag="VHN55_11070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804502.1"
                     /translation="MHGRITHSENNGSGHRARLRKRLFEGGGKALLDHELVEYLLALA
                     IPRRDTKDQAKALVAKYGGIGPLLSASAETLKREGLSDSVIGALKIAEATALRLLE"
BASE COUNT         1124 a         2197 c         2192 g         1212 t
ORIGIN      
        1 cctggcgcgg cgttcgacca aagcgtcggc gtcctgacgg gccttctcga tcatcgcgtc
       61 cgcctcatga cgcgcgcgct cgaccattgc cgcggcctcg ctctccgcct gggccgcctt
      121 ggcggcatat tcggccttca gcgcctcggc ctccttgcgg agtgcctcgg cctcggccag
      181 ctgctcgcga attccgccga tcttcttgtc gagcgccttg ccgatcgccc cgggaacctt
      241 ctgccagacg aggatcgcca gcacgacgat catcgccagc gcgatccaca tcggcgcggt
      301 gattccaagt aattccggct gctcgtggtg ctcggtcgcc ggagcgtggg tctcggctac
      361 caggtgaggc tcagccattg gtcaccgctt tcactgcctt gagcgcctgc tgctcggtca
      421 cttgcttgcc ggtcagcttg gcgaccaggt cacgagcggc gtcggcggcg acggaatcga
      481 tttcggccat cgccttttcc accgacttgc gaatccgggc ctccgccttg tcgatcttct
      541 tcgcggcttc tgaatcgacg gcgcgggtgc gctcctccgc ctcgcgagcg ccgtcctgct
      601 tggcctgcaa ggcgagcttc atcgcttccg cccggcttac ctccatccgc tgccgatatt
      661 cggcctcggt cgtctcggcc tcgtcgcgcg ctttctgtgc gcgctcgagg tcttccgaga
      721 tcttgcggtc gcggtccgca acgacgccct ggatctttgg caccatgcct cgcccgatga
      781 cgaagaaaat ggcaccgaag atgatcgcga gccagaacag ctgcgaccag aaaatgaccg
      841 gaagttgggt gatctgaggc atttcggctc cggctggggt tcagccctgc tcgcgactta
      901 gcgcgcgtac aggatgatca tcgccacggc gaaggcgatg aggccgagaa gctcggccgc
      961 ggcgaagccg atgaacagcc ggccctgctg gccgtcggcc gctgccgggt tgcgaagcgc
     1021 gctctcgagg aacgagccga agacgttgcc gacgcccacc gcggcggcgc cgacgccgat
     1081 cgctgcgagg cctgctccga taacctgtgc cgattggaaa tccatggtct aactccctgt
     1141 gaaaactggt gaactggtta gtgaagattt tctgcgtcgt tgaggtacag cgtcgtcaga
     1201 agagcgaaaa cataggcctg gatcgccgcc accagcagct ccagcgccga aactccgacg
     1261 atgaacagga agctgatggc gctgaccagc aagcccatca ctccgccgcc actcgcgggc
     1321 gccgaggcga aggtgtcgcc ggcgctgatg atgaagcttc cgaacacttc catcaggatg
     1381 tgcccggcga tcatagcgac gaagagtcgc aagccgaggc tgaacggccg aaccatgaag
     1441 ctgatgaact cgatgaccgc gatcagcggc accatcacga tcggcgtccc gtgcgggacg
     1501 aacagcgaga agaagtgaag cttgtgcttg gcgaagccga caatcagcac gatcgagaag
     1561 ctaaggaccg cgagtacgcc ggtgatgctg aaatggctgg tcggggtgaa gggatgccag
     1621 ccgggcacga tggcgaacgg catcagaccg agcaggttgc agaccaagat gaaggtgaac
     1681 agcgagaaga tgtagggcgt gtacttcttg ccgttgggcc cgatgttgac gctcaccatg
     1741 tcgtcgatga agccggtcag cccctcgacc gccatctgcc agcggccggg aacgacctgg
     1801 cgcttcatcc cgccccacat gaacaggccg atgatcgcca atgcagcgag catccaggcc
     1861 gcgctgttgg tgaagctgac gtcgtagggc ccgatgtgca gcggaaccag cggctccacc
     1921 gtgaactggt gcatcgggtc gatcttgcct tctgcggcca ctggtcttcg ctacctcagc
     1981 ttgcgtccgg gccggagccc gaggacgtct tcgaaatcct caaaacgttc accacgccga
     2041 cgccgaaccc gaggaacagc atcagcagga agaacagcgg aaaggtcccg aacaggctgt
     2101 ccagtcccca accgaggatg ccgccaccgg ccggcgctcc gaccaggtgg ctgaacatca
     2161 gctgccaaac ccgggtcgtc gggttcggcg tcgcccttgc ggcccttcgg gcttcctcct
     2221 gttgcatccg tccgagccgc tcttcgagcg agccgagacg cgcgtcctgt ggaagctctg
     2281 ggtcctggtg cggttcgtcg gctgccatgt cttgtctccg gttgtccgag ccggcccgcg
     2341 aacgaggcgg gagagtcggg caggttcaag gacatggcgg cgttggagcc cgccaaaggc
     2401 gcggcccctt tatgaacggg ggggaagata gtcaaccgcg gcgacggcgc tagcgaatat
     2461 ctcgcctcag cggctgcaat agcccggtac cggcaccggc tggccggcgg cccttcggcg
     2521 ccattcgccg tcgctaagca tgtagctctc gccgaccttc acttgcccga gaagttcgca
     2581 gccggcggca atccccactt cctggacggt ggcgttcctg cgcgcggcta ggccggtata
     2641 gaggctccgc cgcttgatgt tcacagcccc cgcctcacgc tgaacggcgg cgctcgcatt
     2701 gctcgcgaat ccgagatagc cgtcgtagcg ttcgccaacc acgcccgcct gccgagccgc
     2761 tgtcatctgc gggctggtct gcgcgaccgc cgccgacacg gctccgaaca gcatgaccgg
     2821 aaagagcact cgcacgaacc tcactgcgaa cctcctggga aggcctccgg gttctgcctg
     2881 attagctgct gaacatcctg ctggagcctg accagcacct cttggcggat gtcgacgttg
     2941 aggttgattt cgatcggttt ctccggcgcc ttgacggtga tgcagcttgc cagcggcacc
     3001 gccatcgccg ctccggcgag cagccgcaaa ccgcgcttga tcgtctggct tgtcatggtg
     3061 ttgcctcgct ttcgggtggg ggttcggtgg agacgtcgac ttcgtcgacg ggcgttgtcc
     3121 tgtcctggtc ttcgtttttc ctgagagtcc gcacttcggt gacgatcccc ggcgcatcga
     3181 gcgggaacgg catgaccggc gcgatcaccg tcgtcgggtc cttgaaggcc ttcgccatct
     3241 ggatgagcgc cctgaacgga ccgttgatgt tgaggttgac caccatcggc acgttcttga
     3301 aggcgccgcg gaccaggccg gcaatgaagc cgccttcggt tccaagagtg atctgctcga
     3361 tcgtgaaccg ggtggcgaat tcgcccgcga gatcgccgtc gagccggacg accatgtgcc
     3421 ggtagcggat gtcgctgagg aggtcgaagg cgactccggc aaagagcccc gcgtcgggct
     3481 tggtgccggt gtacctgaac gctccgcccg ggggccgcga ttctaatcgt ccgccgacga
     3541 tccgaccgcc gctttcgtcg aagatcatcg gcagcacgcc gtcgaacgta ccggtgatct
     3601 cgagcccttc gaagccgagg ctgtcgatga acattttcgc atcgaagccc tgaagctcga
     3661 acgtcagccg tttcggcgcg ttgctgccga aattcaggat cgtctgctgc aggatcaacc
     3721 ggccgcccat gaacggccat tcgccacgct ctatcttcac cagctggtcg gggagaagct
     3781 ggtatcgaag gaccccgttc tcgacgatga tgccggggtt gatccgcctt atgctggcga
     3841 cctgcccggg cgcgctttcg aggccgagga ggtcggtgaa gtggacgctg gtcgtcagcc
     3901 cttcgaccgg cccgaacggc gcggccaggt ccgtgttctg ggtaaagaaa tcaccggtcg
     3961 aggtgacctg gcccgatccc gcccagtcga tcctgccatt cccgcgcaac gtcccttgca
     4021 cgagagcgac aacgccctcg gtcagcgggg tcagctcgtc gggttgcaga ttggggccga
     4081 acggaatgcc gggcacgtcg aggttggcgt gacccgcccc gctgtcgaga ttgtggtcga
     4141 tgtcaacgtc ggtgacgaga gtccccgtcc ccggatggcg aaggctcccg gtcgtcgtga
     4201 tccggttgtt cgccatgacg aaatgcacgt cattgctctt gagcgggtag aagcgcggcg
     4261 gatccgcgcg gtcctcgacg aacaggccgc cgtcgatggt taggcgattg tcgatgaacc
     4321 gccagcggcc gtcgatctgg gtcatcttca gcgggacgtt ggcgatgact gcgtcggcgt
     4381 cggcaagcgt gcccgtcgcg ccgccccggg tgaagttccc gcgcagccgc ccggcattca
     4441 gggccaccgg cgaatccgga tcgcccagcc gaagcgctac tccggtcccg ttgaatccgc
     4501 cctggtcgag gaggatgctg ctggccctga ggcgcatcgg cgcggagccg attcggccgg
     4561 cgagcgaagg attgctgatt cggccgccga cgtggagcgc tccgccgggt gaccgggaga
     4621 ctatcgccgg cccggtgggg cagaccggaa gccgggtccg cgccagctgg atctgctgca
     4681 tcttcagata atcccagctg accaccatgc attcctcgcc gacggcaatt ccgccgttcg
     4741 cggcaactcg tccgctgatc gggaggttga agttgcggac ctggccgccg gggaaattgc
     4801 cgctgaggtt cgcgaccgtg ctgaaccggg ttgccccgct tggctcggcg ttgaaccgga
     4861 gcgtcgacag cgacagccgc gacccgccga ccgtgtaagg ctggaaattc ccgaccccgg
     4921 tcatcgcgcc gttggcggcc tggtggagcg ttaccgaacc ggtcgggagg ccgccgcccg
     4981 tcattgcgat ggtgccgtcg aagcgaagcg cccctttcgg ccagtgatag gtgatcccct
     5041 tccctccggt aatccgggcg cgcccgccgg tcgccgttcg aacggtggca tcggtcaccc
     5101 gggtcgcgcc atagccgggg aagttcacca gccggattcc acccgcgaca tcgaacgagc
     5161 gcgcgctctt ggcgatggcg ttgccgatcg cgctagcgac cggtccgatc ggagtcgcct
     5221 tggtcgcctc cagcgcgccg gtaaggccgg aaatcatcga tggcgcgagg gctgcgccat
     5281 tggcgctgta gcggccgacc atgatcaagc ttccggccgt cgtcttcagc cggtagcgac
     5341 cctgcacgcg ggttcggtcc gcggtgatcg tgccgagcct cgacccctgc gccgccaggt
     5401 cgacgttgcc ggtcgcatcg accaggtcgc ccgcgagcga tatcctgccg ttgagcgccg
     5461 cgagcccgtt gtcgcccgcc gtcaacacct gcgagataat ccgggcgttg gcgtcgtaat
     5521 tgtcgaacgc ctctccgaaa aatgcatcga gctcgaggcg cggctggacg atcgaaaagc
     5581 ggctcttggg gcaagcgaac tggtttgccg tcagcggacc gaccacgtgc ggccggcgcg
     5641 ccttgacctc gatcgccgct gcgccgcgta cgttggcggc cgcgcaattg ccggtaacca
     5701 gctgcgggct cgacgagacg aagcggccct tgaagccgcc ggttaggttg ccgttgccgc
     5761 ggaccgcgaa gccgattgct ccccacggag tcgcaagcgc gatgctgctg tcggcgatgt
     5821 cgagcgccac gtcgggaagg gtgaagggct tcttcggccc gggctcggga ggtggcagca
     5881 gcttatcgat ctcgccccag ctaaccgttc cgtccttcag tacccggccg cggagacgca
     5941 ctcctctggc gacgatccgg tatacgtcga tgcttccgtt ccattggagg cgcatctgga
     6001 tgaggacccg gcgagcggtg acgtcggggt tgtcaggatc gcctatccgc aaattgctga
     6061 tctgctgggt ccttaagccc acccgatcga gcgtgtagct ggcatcgacc ccgcggcttg
     6121 agagctcgcg gtcgatcagg ttgcgggcga tcgggcggcg ctcaacccac aggatgacaa
     6181 gagcgacggc gatgacgatg agcgccccga tcccgaccca tgtcaggatt ttgcgcaggc
     6241 ggtgccgttt gacgacgatc acgtcgccgt catgataatc cccgctctgg tccggcacct
     6301 gcgccatgtc tgcgtttcaa cccgtccgta ctaaagccgt tccgtaagcg gcacgacccg
     6361 tgcttttgac gggagcagcg gtgcagctaa tatcgcttcg ctcggtagtg acgatcggat
     6421 cttcatgcac gggcgaatca cgcacagcga aaacaacggc agcggccaca gggcgaggct
     6481 tcgaaagcgg ctgttcgagg gcggcggcaa ggcgctgctc gatcacgagc tggtcgaata
     6541 tctcctcgcc ctcgcgatcc cccgccgcga caccaaggac caggccaagg cgctggtcgc
     6601 caagtacggc gggatcggtc cgctgctttc ggccagcgcc gagacgctaa agcgcgaggg
     6661 gctgagcgat tctgtcatcg gcgcgctcaa gatcgctgag gcgacggcgc tgcgcctgct
     6721 cgaga
//
LOCUS       DATAKH010000262         1932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_7187,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000262 DATAKH010000000
VERSION     DATAKH010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7187"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..383
                     /locus_tag="VHN55_11075"
     CDS             <1..383
                     /locus_tag="VHN55_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010160532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PEPxxWA-CTERM sorting domain-containing protein"
                     /protein_id="HEX2804503.1"
                     /translation="SDVPMTLTVTVPWIGVINDTSIAGMGFTGYYDTLTGDSDGYQDW
                     MYTAPLVLGNGTYDFYTGPNCCVDEMDAGPVRFTVSGITSVPDGGLGNAGVPEPATWA
                     MMIMGFGLTGAAMRRRKAARLSIA"
     gene            complement(793..966)
                     /locus_tag="VHN55_11080"
     CDS             complement(793..966)
                     /locus_tag="VHN55_11080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804504.1"
                     /translation="MLVGRAIQRAPKYLHGLARTSLLPHEVAKPRERDSVAGVLQEVS
                     PQGPLLGRWITLR"
     gene            922..>1932
                     /locus_tag="VHN55_11085"
     CDS             922..>1932
                     /locus_tag="VHN55_11085"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX2804505.1"
                     /translation="MQIFRRSLDCAPDQHLVRLLLAQSMYQEGDIEAALEQVKLIGPP
                     IRSSFEVRTFEAGLLGILGRHEPQAVIYQKLLREHPRDGGLWMRLGTALKYTGQTRSA
                     IKALHRAVEVQPNFGEGWWSLANMKTFRFEASDIAVMRKALGGKLNPGDAFHLHFALG
                     KALEERNEFEASFEHYAMGNRIRAEGFAPEQMDAGRVAREVDNAIATFDKPLFDRVGN
                     AGHPARDPIFVVGLQRSGSTLIEQILASHPLIEGTSELDAMMHIWVGLDRAAQGAGRT
                     VWEAIQDFDPKQLSDIGADYLERTRPFRTTDRPFFVDKRPANWMYVGLIRLILPNATI
                     IDA"
BASE COUNT          368 a          575 c          643 g          346 t
ORIGIN      
        1 tgtccgatgt cccgatgacc ttgaccgtga cggtgccgtg gatcggcgtg atcaacgaca
       61 cgtccatcgc gggcatgggt ttcaccggtt actacgacac gcttaccggc gactccgacg
      121 gctatcagga ctggatgtac acggcgccgc tcgttctcgg caacggcacc tacgacttct
      181 acacgggccc caactgctgc gtcgatgaga tggacgccgg gccggtgcgc ttcacggtgt
      241 cggggatcac cagtgttccc gacggcggcc tcggcaatgc cggcgttccg gagccggcca
      301 cttgggcgat gatgatcatg ggcttcggcc tgaccggcgc tgcgatgcgc cgccggaagg
      361 ccgcgaggct gtcgatcgcc taatctacga gtaaagctaa gtccaagggg ccccgctgga
      421 gtgatccagc ggggcctttt gtatgcgttg acagcgacag gcgcgctcac ggaacgtgtc
      481 aacgacagtg agacagccgg tcttcaagat taagcttgga ttgcgagctt ttggtttggc
      541 ggattgatcc aggtcgcggt gggttttgtc ggttcgggcg gcttgcggtc gtaagagcct
      601 gctcgacatc gagcacaatg cagggcgcaa aaacgcaaca gattgctatg gccgcgatga
      661 acgccgccga ggaaaatcgg cggcgacctt attggtgtcg attcagcaca acgcacagga
      721 tgggcacagt tggacaacag ctcaaacgaa acggccgggt cgccgcgagc gatccgctgg
      781 gccggcgccg cgctaccgga gggtgatcca ccggcccagg agtgggccct gcgggctcac
      841 ctcctgaaga accccagcga cgctgtcgcg ctcgcgaggc ttggccacct cgtgcgggag
      901 caaggacgtg cgggcgaggc cgtgcagata tttcggcgct cgctggattg cgcgcccgac
      961 caacatcttg tccggctttt gctggcccaa tcgatgtacc aggagggtga catcgaggcc
     1021 gccctcgagc aggtgaagct gatcggtccg ccgattcgct cgagcttcga ggtgcggacg
     1081 ttcgaggccg gattgctcgg tattctgggg cgccacgagc cccaggcggt gatctaccag
     1141 aagctgctgc gggaacaccc gagggatggg gggctgtgga tgcgcctcgg caccgcgctg
     1201 aaatatacgg ggcagacaag atcggcgatc aaggcgctgc accgagccgt agaggtccag
     1261 ccgaacttcg gggaaggttg gtggagcctc gccaacatga agacgttccg ctttgaggcg
     1321 agcgacatcg cggtgatgcg caaggcgctg ggtggaaagc tcaatcctgg cgatgcattc
     1381 catctccatt tcgcgctcgg caaggcgctg gaggaacgca acgaattcga ggcgtcgttc
     1441 gagcattacg cgatgggcaa tcgaatacgc gccgagggct ttgctccaga acagatggac
     1501 gccgggcgag tcgctcgcga agtcgacaac gcgatcgcga ctttcgacaa gccactgttc
     1561 gatcgcgtcg gaaacgcggg gcaccccgcg cgcgacccga tcttcgtcgt cgggcttcag
     1621 cgttccggct cgacactcat cgagcagatc cttgccagcc atccactgat cgaaggtacg
     1681 tcggagctgg acgcgatgat gcatatctgg gtcgggctcg accgcgcagc gcaaggcgcg
     1741 gggcgaacgg tctgggaggc gatccaggat ttcgatccga agcagctaag cgacatcggc
     1801 gccgactatc tggagcgcac tcgaccgttc cgtacgactg accgcccgtt cttcgtcgat
     1861 aaacgtccag caaactggat gtatgtgggc ctgatccgcc tcatcctgcc gaacgcgacg
     1921 atcatcgacg cg
//
LOCUS       DATAKH010000263         3539 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_15021,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000263 DATAKH010000000
VERSION     DATAKH010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 3539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3539
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15021"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(319..1401)
                     /locus_tag="VHN55_11090"
     CDS             complement(319..1401)
                     /locus_tag="VHN55_11090"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HEX2804506.1"
                     /translation="MDADTLNKVQDADRINDSRKAELLSTPIEHIDITKFDARPIVDA
                     MGKMSFTSRDLSRATKIYNTMLEDQSCSIILVVAGSTSAGGCMDLYAEMVRSNMVDAI
                     VATGATIVDMDFFEALGHKHYQANEIPDDDTLRSLYIDRIYDTYIDEEKLQDCDFTIG
                     KIANGLEPRPYSSRAFIREMGKWLSEGNAKKEGSLVQLAYEHDVPIFCPAFVDSSAGF
                     GLVKHQVDAMKAGKPYMVLDAIADFRELTNLKIEAGTTGLLMVGGGVPKNFTQDTVVC
                     AEILGHEDVEVHKYAVQITVADVRDGACSSSTLQEAASWGKVSTAMEQMVFAEATSVL
                     PLLASDAWHRGAWKNREKRRFARLFD"
     gene            complement(1513..2733)
                     /locus_tag="VHN55_11095"
     CDS             complement(1513..2733)
                     /locus_tag="VHN55_11095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010216817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HEX2804507.1"
                     /translation="MHKHHRPLGLATFPTGSRRAADIAATRPVQPVTLLRPHAAHRAA
                     RFFVEKFPGRSLYAVKANPSPDLLKVLWDSGITHYDVASMGEVRLVSQTLPEAVLCFM
                     HPVKAEEAIAEAYFEHGVKTFSLDTMEELEKIVRATNGASDLNLLVRLRVSCEHAKYS
                     LASKFGAEPAELKALLMAARQASDALGICFHVGSQAMSPAAYADAMERVRAAIVEASV
                     TVDIVDVGGGFPSTYPGMEPPPLEAYFQVIHSAFESLPISYSAELWCEPGRALAAEYA
                     SLLVRVEKRRGTELYINDGAYGALFDAAHVGWRFPVALMRDERSRAKPVGFSFYGPTC
                     DDLDHMAGPFELPADVRAGDYVEIGMLGAYGCAMRTAFNGFGIESAEPVDDEPMATLY
                     GARRKLARSKVVTL"
     gene            3004..>3539
                     /locus_tag="VHN55_11100"
     CDS             3004..>3539
                     /locus_tag="VHN55_11100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008602424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX2804508.1"
                     /translation="MIESTLGGRRIWLKCECLQTGHAFKLRGASNRLLQLSEDERPRG
                     VVAFSSGNHAQGVAIAARRLGIRAVIVMPSDAPAVKVDATRSHGAEIVFYDRWSESRE
                     DIARKLAEESGATVVPSFDDPAIVAGQGTVGLEVLEQMPVPPRRIVIPCGGGGLASGI
                     ALACPDAEILIVEPDGWD"
BASE COUNT          621 a         1119 c         1150 g          649 t
ORIGIN      
        1 ggcaagagca ttcgcgagca ccgcggagtt ggacgcctta tactcggcat cattcaaagt
       61 cggtgacggg ctaggggttg gagtgggggt cgggctaggc gtgggtgtcg gtgtcggagt
      121 ggggctcggt cggctgccgc ctccgcctcc gcagccttgc actatcaacg ccagcgcaat
      181 tgtcgacgag gcgaacccca gccggcggca tactttcatc ggcctgaccc tccaccgccg
      241 cttctaagtc cttctcgccc ttgtgtgaat gggcatttga aggagcgcga tggagggtcg
      301 ccgggtcgtt tcctcgggct agtcgaacaa ccgtgcgaag cggcgctttt cgcggttctt
      361 ccacgccccg cggtgccagg cgtcgctggc gagcagcggg agtaccgacg tcgcttcggc
      421 gaacaccatt tgctccatcg ccgtcgatac cttgccccag ctcgccgctt cctgcagcgt
      481 ggacgaggaa caggcgccgt cgcggacgtc ggcgacggtt atctggactg catatttgtg
      541 cacttcgaca tcctcgtggc cgaggatttc ggcgcaaacg acggtatcct gcgtgaagtt
      601 cttgggcact ccgccgccga ccatcagcag gccggtcgtc ccagcctcga tcttgaggtt
      661 cgtcagctcg cgaaagtcgg cgatcgcatc gagaaccatg tacggcttgc ccgccttcat
      721 cgcatcgacc tggtgcttga cgagaccaaa gccggccgag ctgtcgacga acgccgggca
      781 gaagatcgga acgtcatgct cgtacgcgag ctggacgagg ctcccttcct tcttggcgtt
      841 gccctcgctc agccatttgc ccatctcgcg gatgaaggcg cggctgctgt acgggcgcgg
      901 ttcaaggccg ttggcgatct tgccgatcgt gaagtcgcaa tcctgcagct tctcttcgtc
      961 gatataggtg tcgtagatgc ggtcgatgta aagcgagcgc agcgtgtcat cgtcagggat
     1021 ttcattggct tggtagtgtt tgtggccaag cgcttcgaag aaatccatgt cgacgatcgt
     1081 tgctcccgtg gcgacgatcg cgtcgaccat gttcgaccgt accatctccg catacaggtc
     1141 catgcagccg cccgcggagg tcgatccggc gacgaccagg atgatcgagc aggactggtc
     1201 ctcgagcatc gtgttgtaga ttttcgtcgc ccgcgacagg tcgcggctgg tgaagctcat
     1261 cttgcccatc gcgtcgacga tcggacgagc gtcgaacttg gtgatgtcga tatgttcgat
     1321 cggcgtcgag agcagctcgg ccttgcggga gtcgttgatc cggtcggcgt cctgcacctt
     1381 gttcagcgta tcagcgtcca ttttcatgct ccattgcgcc gcccggcatc gggcagctgc
     1441 gacgaaaggc atgtcattcg ttgcggggga cagcctcacc ccattcgatc gggccgcgcc
     1501 ggcccgaata agctacagcg tcacgacctt ggaacgggcg agcttgcgcc ttgctccgta
     1561 caaggtcgcc atcggctcgt cgtccaccgg ctcggcgctt tcgatgccga agccgttgaa
     1621 ggcggtgcgc atcgcgcagc cataggcccc gagcatgccg atttcgacat agtcgccggc
     1681 gcgaacgtcg gctggcagct cgaatggccc cgccatatgg tcgaggtcgt cgcaggtagg
     1741 gccgtagaag ctaaacccga ccggcttcgc ccgcgaccgc tcgtcgcgca tcagcgccac
     1801 cgggaaacgc cacccgacat gggccgcgtc gaacaaggcg ccataagcgc cgtcgttgat
     1861 gtagagctcg gttccgcggc gcttctcgac tcgcaccagc aggctcgcat attcggccgc
     1921 cagcgctcgt ccgggctcgc accacagctc agccgaatag ctgatcggaa gcgattcgaa
     1981 cgccgagtgg atgacctgga aataggcttc aagcggcggc ggctccatgc ccggataggt
     2041 cgacgggaat cccccgccga cgtcgacgat gtcgaccgtg accgaagcct cgacgattgc
     2101 ggcgcggacc cgctccatcg cgtctgcata ggccgccggg ctcatcgcct ggctgccgac
     2161 gtggaagcag atgccgagcg cgtccgacgc ctgccgagca gccatcaaaa gcgccttcag
     2221 ctcagcgggc tcggcgccga acttcgaggc aaggctgtac ttcgcatgct cgcaggagac
     2281 ccgcagccgg accagcaggt tgaggtcgct ggcgccgttt gtggcacgga cgatcttctc
     2341 cagctcctcc atcgtgtcga ggctgaaggt tttcacgccg tgctcgaaat aagcctcggc
     2401 gatggcctcc tcggccttca ccggatgcat gaagcacaac accgcctcgg gaagcgtctg
     2461 gctgaccagc cggacctcgc ccatcgaggc gacgtcgtaa tgggtgatcc ccgaatccca
     2521 cagcaccttg agcaggtcgg gggagggatt ggccttcacc gcgtacagcg agcgtcccgg
     2581 gaacttctcg acgaagaagc gcgcggcacg atgcgccgcg tgcggacgca gaagcgtcac
     2641 cggctgaacc ggccgagttg cggcgatgtc tgcagcccgg cgcgagccgg tcgggaaagt
     2701 cgctagcccc agcgggcgat gatgcttgtg caattcaagg gacctccaac gggtagttgt
     2761 ccaaaaaggc tgccttgcgg ttggaagtcc catggggcag cggacgcgcg atatatgtgc
     2821 gggggtcacg gctgtaaagg ttattgctgc tgacctcatg gatttcgcag gcatatgtcg
     2881 ctgatctgca acggctaatc gaaagggtga aatatcaacc gcttatcaaa ggcccagagt
     2941 gtcacccgtg cggacatcgt cgcggcggcg gagcgcatcg gcgacctggt cgagcgcacg
     3001 cctttgatcg aaagcacgct tggcggccgc cgcatctggc tgaaatgcga atgcctgcag
     3061 accggccacg cgttcaaact gcggggagcg agcaaccggc tgctccagct ctccgaagac
     3121 gaacggccgc gcggagtcgt cgcattttcg tcgggaaatc acgcccaggg cgtggcgatc
     3181 gccgccaggc gcctcggcat tcgcgcagtc atcgtgatgc cctcggacgc accggcggtg
     3241 aaagtggacg caacccggag ccacggagcg gaaatcgtct tctacgaccg gtggagcgaa
     3301 agccgcgagg acatcgcccg caagctggcg gaggagtccg gggcgaccgt cgttccgagc
     3361 ttcgacgacc ccgccatcgt tgccggccag gggacggtcg gactcgaggt cctcgagcaa
     3421 atgccggtcc cgccccgccg gatcgtgatt ccgtgcggcg gcggcgggct cgcctcggga
     3481 atcgcgctgg cctgtccgga cgccgagatc ctgatcgtcg agccggacgg ctgggacga
//
LOCUS       DATAKH010000264         2477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_7370,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000264 DATAKH010000000
VERSION     DATAKH010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7370"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..553
                     /locus_tag="VHN55_11105"
     CDS             <1..553
                     /locus_tag="VHN55_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019051672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX2804509.1"
                     /translation="VLCLLAFFYFWFGNYWLGMLAGFAFMVLDTVDGKLARCTGTSSQ
                     LGNFFDHGIDLVHPPFWYWAWAHGLAPYGRPLEPVYETMLLAAIVIGYVAQRIIEGIF
                     IARFKMHIHVWEPIDSRFRLVTARRNPNMAILALALLVGRPDIGLELVALWTILSLIF
                     HMVRLAQAEARAWRGSPLVSWLQ"
     gene            550..1317
                     /locus_tag="VHN55_11110"
     CDS             550..1317
                     /locus_tag="VHN55_11110"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX2804510.1"
                     /translation="MSGLTAIVLAGSRPGSDPLAAAFGTDLKALVPVGGKPMVRWPVE
                     TLLESERVSQVRVLAQEPERIGAVLPAHPKLTVDRSQATIAATLEKLCFDPSVEWPLI
                     VTTADHVLLDSAMIDEFCDLSELADIAIAVVERDNLMGRLPQSRRTWIRFRSGAFSGA
                     NLFRLSGTKVLPALELWRSVEQDRKKGWTLLWALGPLNFLAAALRLRTIHQTLDRIGE
                     RLGARIEAIDLSDPLAAVDVDKLSDHGLVEQLLAERA"
     gene            1314..1985
                     /locus_tag="VHN55_11115"
     CDS             1314..1985
                     /locus_tag="VHN55_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family hydrolase"
                     /protein_id="HEX2804511.1"
                     /translation="MSDLAVYDLDRTITRRPTYTLFLIHCALRRQQWRLLFAPVVAIA
                     MLAYAAGLFDRGRLKEICQALLIGRHIHAQDMKPLAESFAESTVANNIRPGARRAIER
                     DREQGRRLVLATASYRLYADAIAERLGFEDVIGTGSVIGLDERVQARIEGRNCYGEEK
                     MRMIAEWVENSGLLGKHGHVRFYSDHASDAPAFEWSDEPVAVNPHARLERLAIERGWA
                     VEDWG"
     gene            complement(2033..>2477)
                     /locus_tag="VHN55_11120"
     CDS             complement(2033..>2477)
                     /locus_tag="VHN55_11120"
                     /inference="COORDINATES: protein motif:HMM:NF021361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEX2804512.1"
                     /translation="AFLLALALATAAPPSAEAQTLGRKLAEMGSLAALLPLMKEKETQ
                     ELLQEDPALSTEEQAQLKLVAERVYQSGYERLMRATGEAYAQRLSIGELRSLVSFFGS
                     SAAAKYREATPAVIADTMKAVGELDFKGDVRKDFCAQTKRLCPKE"
BASE COUNT          406 a          792 c          801 g          478 t
ORIGIN      
        1 ggttctgtgc ctgctcgcct tcttctactt ctggttcggc aattactggc tgggcatgct
       61 ggccggcttc gcgttcatgg tgctcgacac cgttgacggg aagctcgcgc gctgcaccgg
      121 gacgtcctcc cagctcggca atttcttcga ccacgggatc gacctcgtcc acccgccctt
      181 ctggtactgg gcgtgggcgc acgggctcgc gccctacggg cgccccctcg agccggttta
      241 cgaaacgatg ctgctggccg cgatcgtcat cggctatgtc gcccagcgga tcatcgaggg
      301 cattttcatc gcccgcttca agatgcacat ccacgtgtgg gagcccatcg acagccgctt
      361 ccgcctggtc acggcacgcc gcaacccgaa catggcaatc ctggcgttgg cgcttcttgt
      421 cggccgcccc gacatcgggc tggagctggt cgctttgtgg acgatcctgt cgctaatctt
      481 ccacatggtc cggctcgccc aggccgaagc gagggcgtgg cgcggctccc cgctggtgtc
      541 ctggctgcaa tgagcgggct caccgcgatc gtccttgccg gatcgcggcc cggaagcgat
      601 ccgctcgcgg cggcgttcgg aaccgacctc aaggcccttg tcccggttgg cggaaagccg
      661 atggtgcgct ggccggtcga aacgctgctc gagtccgaac gcgtgtcgca ggtccgcgtt
      721 ctcgcgcagg agccggagcg aatcggggcc gtgcttccgg cacaccctaa gctcaccgtc
      781 gatcgctccc aggcgacgat cgcggcgact ctggaaaagc tctgcttcga tccgtcggtt
      841 gaatggccgc tgatcgtcac caccgccgat cacgtgttgt tggactcggc catgatcgac
      901 gagttctgcg acctgtcgga gcttgcagac atcgccatcg cagtggtcga gcgcgacaat
      961 ttgatggggc ggcttccgca atcgcggcgc acctggattc gcttccgatc cggggcattc
     1021 agcggcgcca acctgttccg actcagcggc acgaaggtcc ttccggcgct ggagttgtgg
     1081 cgttcggtgg agcaggaccg caagaagggc tggacgctgc tgtgggcctt gggcccgctc
     1141 aattttctcg cggcggcgtt gcggttgcga acgatccacc agactctgga ccggattggc
     1201 gagaggctcg gcgccaggat cgaggcgatc gatctctccg acccgctggc ggctgtcgac
     1261 gtggacaagc tgtccgacca cgggctcgtg gagcagttgc tggcggagcg ggcatgagcg
     1321 accttgcagt ctacgatctc gaccggacga tcacccgccg tccgacttac accttgttcc
     1381 tgatccattg cgcgctccgg cggcagcaat ggcggctcct gttcgcgccg gtcgtcgcaa
     1441 tcgcgatgct agcttatgcc gctggcctgt tcgatcgcgg gcggctcaag gaaatctgcc
     1501 aggctttgct gatcgggcgc cacatccacg cgcaggacat gaagccgctg gccgaaagct
     1561 tcgccgaatc gacggtcgcg aacaacatcc gcccgggcgc ccggagggcg atcgaacgcg
     1621 accgcgagca gggacggcga ctggttctcg cgaccgcctc ctaccgcctc tacgccgatg
     1681 ccatcgccga gcggctcggc ttcgaagacg tcatcggcac cggctccgta atcggcctcg
     1741 acgaacgggt gcaggcgcgg atcgaaggac gcaattgcta cggcgaagag aagatgcgga
     1801 tgatcgcaga gtgggtcgag aattctggcc tgctcggaaa gcacggccat gtccgattct
     1861 attccgacca cgcttcggac gccccggcat tcgaatggtc ggatgagccg gtcgcggtga
     1921 atccgcatgc aaggctcgag cgattggcga tcgagcgcgg ctgggcagtg gaggattggg
     1981 gctaatccgt ggccgctgtg gtgacgccgg agatattcgc cgtccgagga cgctattctt
     2041 tcgggcagag ccgtttcgtt tgcgcgcaaa agtccttgcg aacgtcaccc ttgaaatcca
     2101 gctcgcctac cgccttcatc gtgtcggcga tcacggcagg agtggcctcc cgatatttcg
     2161 cggctgccga agagccgaag aagctgacga gggaccgcag ctcgccgatc gaaagccgct
     2221 gtgcataagc ttcgccggtg gcgcgcatca gccgttcgta gccagattga tagactcgtt
     2281 cggcgaccaa tttcagctgc gcctgctctt ctgtggagag agcggggtcc tcctgcagca
     2341 attcctgagt ctctttttcc ttcatcaagg gaagaagcgc cgccaggctt cccatttcgg
     2401 ccaacttgcg cccgagcgtc tgggcttccg cagagggtgg agcagcagtc gcgagagcta
     2461 aggcgagaag gaatgcc
//
LOCUS       DATAKH010000265         8857 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_15270,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000265 DATAKH010000000
VERSION     DATAKH010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8857
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15270"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VHN55_11125"
     CDS             <1..293
                     /locus_tag="VHN55_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010544170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-nitropropane dioxygenase"
                     /protein_id="HEX2804513.1"
                     /translation="VIAVRALKNREMENFAAKQREVADLLDRQQVEMAEAQLQIEHYW
                     AGALRRAVIDGDVETGSVMAGQSVGMVKKEEPVAAIIAELVDEAAAALESRG"
     gene            344..2611
                     /gene="ptsP"
                     /locus_tag="VHN55_11130"
     CDS             344..2611
                     /gene="ptsP"
                     /locus_tag="VHN55_11130"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010160905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEX2804514.1"
                     /translation="MPLTAAASAREILTGLHEVMAGRGSAQSKLDKVVDLIADKMESE
                     VCSIYLLRDNKLELYATHGLRKEAVHVTKLKFGEGLVGSIAAEGRILNLDEAAGHDEF
                     VYRPETGEERFHSFAGVPIIYRESPVGVLSVQHAEPRPYADVEIEALQTVAMVLSELI
                     AGARLVDGARRGRLRSAGPLRLTGLKLVAGMARGQAVFHEPRVVIEHTVADDIEAERD
                     RVYGAFRKMREQIDNMTREAEFGAAGEHEEILETYRMFAYDEGWSRRINEAIDSGLTA
                     EAAIERVQQRTRARMREIDDPLLQERMHDLEDLSNRLLRIVSGRMGTAAQTGLAQDTV
                     LIARNLGPAELLEYDRQRLKAVVLEEGSLTAHMTIVARAMGVPVVGRVPDVRHIVEEG
                     DTVLVDGDNGSVMIRPSKALLASFDQRMALSHKRRAKLEAVRSLAAETTDGVPVSVMV
                     NAGLAEDAASLELTGADGIGLFRTEFQFLVSATLPGRESQLKLYKKVLDAAGDKPVVF
                     RTLDIGGDKALPYLSNGGEEAENPSMGWRALRLSLDRSTLMKAQARALIQAAAGRVLR
                     VMFPMISEPWEYEQARALFEAQVEWAKRGKRVLPSRIEFGAMLEVPSLAEQLDLLLPR
                     VDFLSIGTNDLTQFLFAADRGDPRLAQRYDWLSPAILRFLKRVIDAAREAGIPVRVCG
                     EMSGRPLECMALIGLGAENFSITPAAVGPIKAMVRSLDAAAIRSRMEQWLARPPQDLR
                     KASHDWARRHDVAIA"
     gene            2686..3501
                     /locus_tag="VHN55_11135"
     CDS             2686..3501
                     /locus_tag="VHN55_11135"
                     /inference="COORDINATES: protein motif:HMM:NF024855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RodZ domain-containing protein"
                     /protein_id="HEX2804515.1"
                     /translation="MDEELEATEFPSVGERLRSAREEKGFSLEDIASETRIPLRHLES
                     LEASDWDKLPALTYTIGFAKNYANAVGLDRAEIGEQIRTERGAYRNDYSTVEHFEPAD
                     PARTMPKWLVLAAIGAIVVTVLLFTWLQNRSVSEEPPAAGSTEQPVQQPAPVPSTPQQ
                     PQPAAAQGPVVITATGPAWIRVTDQGATLFEGMMQPGQRFEVPQTATEPVLRAGAPEA
                     IRINVGQAVAPPIGPAGQVVSDVSLRPADLMRAPQASAQQPPPAPAAQNSLAE"
     gene            3547..4398
                     /locus_tag="VHN55_11140"
     CDS             3547..4398
                     /locus_tag="VHN55_11140"
                     /inference="COORDINATES: protein motif:HMM:NF024572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX2804516.1"
                     /translation="MVVGKFKMKPVHLRIALSAAALCALATPPALAQRPLSQEQQIMF
                     LQQQLSASQAAAVRLEQRLNQIERQLQQLINLGEVNGHAVQVLQSDLGKLRSDFESRI
                     AALESRPPSQQSARTVPEEAAPAAREPAPQTAVRSARDDSAAVPEPARTASSDAGEEA
                     YSEGFRLWRDGEYDRAITALRAFLSGYPDHRRASFARNLIGRAMLDKGQPRPAAEALL
                     ANYRTDPKGERAPDSLYYLGQALMKLDQPGQACKAYGELEDIYGSSIRPDLQALVSKA
                     KADARCS"
     gene            4361..5353
                     /gene="tilS"
                     /locus_tag="VHN55_11145"
     CDS             4361..5353
                     /gene="tilS"
                     /locus_tag="VHN55_11145"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008993668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEX2804517.1"
                     /translation="MSPRPRPTRAVPDAALVGRFAADLDALAAPDARLGIAVSGGPDS
                     LALLLLASAARPGLIEAATVDHRLRPESADEVRMVASVCERLDTPHSTLRIEWAVKPD
                     SGVQERARTERYRLLGRWASERGLEAIVTAHHLDDQAETLVMRLNRGSGARGLAAMRS
                     LAVVPGSDLPLVRPLLGWRRLELEEVCRTAGIEPVDDSSNRDEQFERVRIRRGLAEAE
                     WLDPEAIARSAAHLASADSALDWAAEREWQSQVTRCGKAIFYQPAAPTEIRRRIVARC
                     IAALASEGQGEVVRGRELDRLVDSLSDGATATLRGVLCSGGDKWRFAPAPPRNS"
     gene            complement(5357..6517)
                     /locus_tag="VHN55_11150"
     CDS             complement(5357..6517)
                     /locus_tag="VHN55_11150"
                     /inference="COORDINATES: protein motif:HMM:NF017727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEX2804518.1"
                     /translation="MAASHPFFRGAFRPFFFGGAMWGLIALALWVSALSGWLTLPASI
                     DPLAWHRHEMLFGFVGAVVAGFLLTAVPNWTGRLPIAGWPLAGLFGVWLAARLALLFS
                     ASIGLWLAAALDVGFFLVLGGFAGREVLQANNRNLPVVGMVLLFGTANAIDYLAIAEV
                     LPAELGWMLAIAIVVLLISLIGGRIVPSFTRNWMAKRGISGGLPTQPGRFDIFTIAAT
                     AFALLGWLTGPAGIPIGLLLIAAALLQAVRLARWRGMRAARDPLVFILHVGYAWIPAG
                     LALLGLSLMDVVPRSAAIHALTAGAMATMILAVMTRASLGHTGRELKANAATTAIYVA
                     VTAGALLRVAASLELVDYMIGIEIAGLAWGGALLLFLIAYFPVLWKARLGEN"
     gene            6670..6882
                     /locus_tag="VHN55_11155"
     CDS             6670..6882
                     /locus_tag="VHN55_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015458998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KTSC domain-containing protein"
                     /protein_id="HEX2804519.1"
                     /translation="MPSTVIRRFDYSPDARELTVEFVTGRRYVYSGVPEEEADAMRRA
                     FAKGIYFNRRIRDRYACRRLSEEPDQ"
     gene            complement(6876..7313)
                     /locus_tag="VHN55_11160"
     CDS             complement(6876..7313)
                     /locus_tag="VHN55_11160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX2804520.1"
                     /translation="MSKLLISLTAAASAGALAMGLSAPATAQSASDVRIAEVIVYGND
                     PCPRSTESDVVVCARKPEAERYRIPERYRESGPLQTRESWANKAKSFEYVGRTGIMSC
                     SAVGPAGHTGCLQNMIDRAKAEAREAEGQAVPPPEAAPPGPGY"
     gene            complement(7363..7854)
                     /locus_tag="VHN55_11165"
     CDS             complement(7363..7854)
                     /locus_tag="VHN55_11165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010127714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethoxyubiquinone hydroxylase family protein"
                     /protein_id="HEX2804521.1"
                     /translation="MIRVDQAGEYGATRIYAGQLAVLKPSSPAAKMVSRMALQEQRHL
                     KRFDELVAKRRVRPTVLQPLWNVAGFALGAGTALIGEEAAMACTDAVETEIDRHYQQQ
                     LDELGDDDPELSADIAEFQAEELEHRDTARAAGAARAPAYPLLTGTIRAACRVAIALS
                     KRI"
     gene            complement(7899..8387)
                     /locus_tag="VHN55_11170"
     CDS             complement(7899..8387)
                     /locus_tag="VHN55_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019830977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEX2804522.1"
                     /translation="MSTRAQWGRLLALLLPLGLLGGALGSQYFGGLYPCEMCYWQRYP
                     HGAAILLAGVALFSPADSQRSRTLTLIAALAIAVSGAIGVYHAGVELGIFEGFTTCTS
                     TATATSTEELLKKLMKVPLIRCDEVQWSFLGVSMAGWNAILSLSGAAAIAWLTLAARR
                     AR"
     gene            complement(8436..>8857)
                     /locus_tag="VHN55_11175"
     CDS             complement(8436..>8857)
                     /locus_tag="VHN55_11175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010542812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX2804523.1"
                     /translation="VMGEKSFGKGSVQTVVQTGPRSALRLTTARYYTPSGRSVQAGGI
                     DPDIAVPQLSDPDYENRPAIREADLRRHLLAQVKADDKLLEHDDTSQDPRFSVTADEL
                     EKKGIKDFQLHYALNTLKRLGSRTAVASAGGKSGTRR"
BASE COUNT         1564 a         2947 c         2912 g         1434 t
ORIGIN      
        1 cggtgatagc tgtgcgcgca ctgaaaaacc gcgagatgga gaatttcgct gctaagcaac
       61 gtgaggtcgc cgaccttctc gacagacagc aggtggagat ggccgaggcg cagctccaga
      121 tcgaacatta ttgggccgga gcgctgcgcc gggcagtgat cgatggcgat gtcgaaaccg
      181 gatcggtcat ggccggccag tcggtcggca tggtcaagaa ggaggagccg gtcgccgcga
      241 tcattgcgga gctggtcgac gaagccgctg ctgctctcga aagcaggggc tgagccgttc
      301 cgccgcgtga cagcgccgcg gcgcatctga tagcgctgcc ttcatgccgc tgaccgccgc
      361 cgcatctgcc cgcgaaatcc tgaccgggct tcacgaagtg atggcggggc gcggctcggc
      421 gcaatccaag ctggacaagg tcgtagacct gatcgctgac aagatggaga gcgaggtctg
      481 ctccatctac ctccttcgcg acaacaagct ggagctgtac gccacccacg gccttcgcaa
      541 ggaagccgtt cacgtcacca agctgaagtt cggcgaaggc ctggtcggat cgatcgccgc
      601 cgagggccgc atcctcaacc tcgacgaagc cgcgggccac gacgaattcg tctatcgccc
      661 cgaaaccgga gaggaacgct tccacagctt cgcgggcgtg ccgatcattt accgcgagag
      721 cccggtcggc gtgctctcgg tccagcatgc cgagcctcgg ccctacgccg acgtcgagat
      781 cgaggcgctt cagacggtgg ccatggtgct ttccgagctc atcgctggcg cccggcttgt
      841 cgacggcgcc cgccgcggcc gccttcgcag cgccggcccg ttgcggctca cgggccttaa
      901 gctcgtcgcc ggaatggcgc gggggcaggc cgtgttccat gagccccgag tcgtcatcga
      961 acacaccgtc gccgacgaca tcgaggccga gcgcgacagg gtctacggcg cgttccgcaa
     1021 gatgcgcgag cagatcgaca acatgactcg cgaggccgag ttcggtgcgg cgggcgagca
     1081 tgaggagatc ctcgagacct accgaatgtt cgcctacgac gaaggctggt cgcggcggat
     1141 caacgaagcg atcgattcgg gcctaaccgc ggaagccgcg atcgagcggg tccagcaacg
     1201 cacgcgcgcg cggatgcgcg agatcgacga cccgcttctt caggagcgga tgcacgacct
     1261 cgaggacctg tcgaaccggc ttctcaggat tgtctccggc agaatgggca ctgccgccca
     1321 gaccggcctt gcgcaggaca ccgtgctgat cgcccgcaat ctcggccctg cagagctgct
     1381 cgaatacgac cggcagcggc tcaaggcggt ggtgctcgag gaaggctcgc tgaccgcgca
     1441 catgacaatc gtcgcgcggg caatgggagt gccggtggtc ggccgcgtcc ccgacgtccg
     1501 ccatatcgtc gaagaaggcg acacggtcct cgtcgacggc gacaacggca gcgtcatgat
     1561 ccggccgtcg aaggcgctgc tcgccagctt cgaccagcga atggcgctca gccacaagcg
     1621 ccgggccaag ctcgaggcag tgcggtcgct agcggcggaa accaccgatg gggtcccggt
     1681 cagcgtcatg gtcaacgccg gccttgccga ggacgcggcg tcgctcgaac tgaccggcgc
     1741 cgacgggatc gggttgttca ggaccgagtt ccagttcctt gtctccgcga cccttcccgg
     1801 ccgggagagc cagctcaagc tgtacaagaa ggtcctcgat gctgcgggcg acaagccggt
     1861 ggtgttccgt actctcgaca tcggcggcga caaggcgctt ccctatctct cgaatggtgg
     1921 ggaggaagcg gagaatccgt cgatggggtg gcgggcgctt cgcctgtcgc tcgaccgttc
     1981 gacgctgatg aaggcgcagg cgcgcgcgct tatccaggcc gctgccggcc gggttcttcg
     2041 ggtcatgttc ccgatgatct ccgagccgtg ggaatatgag caggcccggg cgctgttcga
     2101 agcacaggtc gaatgggcga agcgcggcaa gcgagtcctt ccttcgcgga tcgagttcgg
     2161 cgcgatgctc gaagtcccct cgctcgccga acagctcgat ttgctgcttc cgcgggtcga
     2221 cttcctgtcg atcggaacca acgacctcac gcagttcctg ttcgccgccg atcgcggcga
     2281 tccgcgcctt gcccagcgat acgactggct gagcccggcc atccttcgct tcctgaagcg
     2341 ggttatcgat gccgcccgcg aggcggggat tccggttcgc gtctgcggcg agatgagcgg
     2401 acggccgctc gaatgcatgg cgctgatcgg tctcggcgca gagaattttt cgatcacccc
     2461 ggcggcggtc ggcccaatca aggcgatggt ccgctcgctc gacgcggccg cgatccggtc
     2521 gcggatggaa cagtggctcg cccggcctcc gcaggacctt cgaaaggcat cgcacgactg
     2581 ggctcgccgg catgacgtgg ccatcgcctg aaatggcggt gatcggctgt tgacagtccg
     2641 cgggtcggct tcgacaacat ggctggcccg cagcaaaggt gaggaatgga cgaagagctt
     2701 gaagcgaccg aatttccgtc cgtcggagaa cggctccgtt ccgcgcgcga ggaaaagggc
     2761 ttcagcctgg aggacattgc ctcggagacg cgaatcccgc tccgccacct cgaaagcctc
     2821 gaagccagcg attgggacaa gcttccggcg ctgacctaca cgatcggctt cgccaagaat
     2881 tacgccaatg ccgtcgggct cgaccgggcc gaaatcggcg agcagatccg caccgaacgc
     2941 ggcgcctatc gcaacgacta ttccacggtg gaacactttg aaccggcgga ccctgcgagg
     3001 accatgccca agtggctggt gctggcggcg attggcgcaa tcgtggttac ggtacttctg
     3061 ttcacctggc tccagaaccg ctcggtgagc gaggagccgc ctgcggccgg ctccaccgaa
     3121 caaccggtgc aacagcccgc gcctgtgcct tcaaccccgc agcagccgca gcccgctgct
     3181 gcccaggggc cggttgtgat caccgccacg gggccggcgt ggatacgggt gaccgatcag
     3241 ggcgcgacac tgttcgaagg gatgatgcag ccggggcaga ggttcgaggt tccgcagacc
     3301 gccaccgagc ccgtccttcg cgccggcgct ccggaggcga ttcgaatcaa tgttggacag
     3361 gcggtggctc cgccgatcgg gcccgccggc caggtggttt cggatgtcag cctgcgtccg
     3421 gcggacctga tgcgcgctcc gcaggcatcc gcccagcagc ctccgccggc tcccgcggcg
     3481 caaaattcgc tggcggaata gtttcatcgc cgcgtaagct cggccaggtc acattcgcga
     3541 acgttgatgg tggtggggaa gttcaagatg aaaccggtgc atttgcgcat cgctctttcg
     3601 gccgcggcgc tttgtgcgct cgcaacgcct ccggcattgg cgcagcggcc gctgagccag
     3661 gaacagcaga tcatgttcct gcagcagcag ctttccgcaa gccaggccgc cgcggtccgt
     3721 ctcgaacagc ggctcaacca gatcgagcgc cagctccagc agctgatcaa ccttggcgag
     3781 gtcaatggcc atgccgtgca ggtgcttcag tcggacctcg gcaagctgag gagcgatttc
     3841 gaatcccgga tcgcggccct cgagtctcgc ccgccatccc agcagtcggc aaggacggtg
     3901 ccggaagagg ctgccccggc ggcacgtgag cccgcgccgc agactgcggt ccgctcggcc
     3961 cgggacgatt cggctgctgt tcccgaaccg gcccggacag catcgtcaga cgctggggag
     4021 gaggcctatt ccgaaggctt ccgtttgtgg cgcgatggcg aatacgaccg cgcgatcacc
     4081 gcgcttcgcg ccttcttgtc gggctatccc gatcatcggc gagcgagctt cgcccgcaac
     4141 ctgatcgggc gggcgatgct cgacaagggc cagccgcggc cggcagcgga agcgcttctc
     4201 gccaactacc gcaccgaccc gaaaggcgag cgggcaccgg acagcctcta ttacctcggg
     4261 caggcgctga tgaagctcga ccagccggga caggcgtgca aggcctatgg cgagctcgag
     4321 gacatctacg gctcgtccat tcgccccgac ctccaggcac ttgtctccaa ggccaaggcc
     4381 gacgcgcgct gttcctgacg ctgcgctggt cggacgtttc gccgccgacc tcgacgctct
     4441 ggccgcgccg gatgcgcggc tcggaattgc cgtttccgga ggcccggaca gccttgcgct
     4501 gctgctgctt gcctcggcag cgcggcccgg cctgatcgaa gccgcgaccg tcgaccatcg
     4561 cctgcgcccc gaatccgcgg atgaggtgcg aatggtcgcg agcgtctgcg aacgtctcga
     4621 tactccccat tcgacgctta gaatcgagtg ggcggtaaag cccgacagcg gggttcagga
     4681 gcgcgctcgt accgagcgct accgactgct cggccgctgg gcctcggagc gaggtctcga
     4741 ggcaattgtc accgcgcacc atctcgacga ccaggcggaa acgctggtga tgcgcctcaa
     4801 ccgcggcagc ggggcgcgcg ggctcgctgc aatgcgcagc ctcgcggtcg tccccggctc
     4861 cgatcttccg ctggtccggc cgctgctcgg ctggcgccgc ttagagctgg aagaggtctg
     4921 caggacggcc gggatcgagc ccgtcgacga ctccagcaac cgcgacgagc aattcgagcg
     4981 ggtccgcatt cgccgtggcc tggccgaggc cgaatggctg gatcccgagg cgatcgcccg
     5041 gagcgctgcc catctcgcca gcgccgattc cgcgctcgac tgggcggcgg agcgggagtg
     5101 gcagtcgcag gtcacccgct gcggtaaagc gatcttctac caaccagcgg cccccaccga
     5161 aatccgccgc aggatcgtcg ctcgctgcat cgccgcgctg gcgtcggaag ggcagggcga
     5221 ggttgtccgc gggcgcgagc tcgaccggct cgtcgactca ctctccgatg gcgcaacggc
     5281 gacacttcgc ggtgtgcttt gctcgggcgg cgacaagtgg cggttcgctc cggcgccacc
     5341 gcgcaacagc tgattttcag ttctcgccca ggcgggcttt ccacaggacg gggaagtaag
     5401 cgatcaggaa cagaagcaat gctccgcccc aggcgagacc ggcgatctcg atcccgatca
     5461 tatagtcgac gagctcaagc gaggccgcca cacgaagcag cgccccggcg gtgaccgcca
     5521 cgtagattgc ggttgtcgca gcgttcgcct tcagctctcg cccggtgtgg cccaggctgg
     5581 ctcgagtcat caccgccagt atcatcgtcg ccatcgctcc cgctgtaagc gcatggatcg
     5641 cggcgcttcg cggaacgacg tccatcaggc tgaggccgag gagcgccagc cccgcgggaa
     5701 tccacgcgta tccgacgtgg agaatgaaca cgagcgggtc gcgagcggct ctcatcccgc
     5761 gccagcgtgc cagtcgaacg gcttgcagca gcgccgctgc gatcagcagc aggccgatcg
     5821 gaataccggc aggcccggta agccagccga gaagggcgaa cgcagtggcc gcgatggtaa
     5881 agatatcgaa acggcccggt tgggtgggca gcccgcccga aatcccgcgc ttggccatcc
     5941 agttgcgagt gaaggacggg acgatacgcc cgccgatcag cgatatcagg agcacgacaa
     6001 tcgcgattgc cagcatccat ccgagttccg ctggcaggac ctccgcgatg gcgagatagt
     6061 cgatcgcgtt ggcggttccg aaaaggagca ccattccaac caccggtagg ttgcggttgt
     6121 tcgcctgcag cacctcgcgg cccgcaaacc cgccaagcac gaggaagaag ccgacgtcga
     6181 gcgcggctgc cagccacagg cctatcgaag cggagaacag gagcgccagc cttgccgcca
     6241 gccatacccc gaacagcccc gcgagcggcc agccggcgat cggcagccgc cccgtccagt
     6301 tgggcactgc ggtcagcagg aagcccgcga ccactgcgcc gacgaagcca aacagcattt
     6361 cgtggcggtg ccacgccagc ggatcgatcg atgccggcaa ggtgagccaa ccgctcagcg
     6421 ccgataccca taaagcgaga gcaatcagcc cccacatcgc tccaccgaag aagaacggac
     6481 gaaatgcgcc gcgaaagaag ggatgtgaag cggccattcg ccgcttcctc agagcgagca
     6541 tcagctctcc gcgggtgacg ctgctaggcg gattggaagc catggaccga ccatagccgc
     6601 tcctccggag acactttcat acgtaaatgc cgaaatgcag ccgggccgcg taacaagcgt
     6661 tcatcggcca tgccctcgac ggtgatccgc cggttcgact attcgcccga cgcacgggag
     6721 ctaacggtcg agttcgtcac cggccgacga tatgtctatt ccggagttcc agaggaggaa
     6781 gcggacgcga tgcgccgagc cttcgccaag ggcatctact tcaacaggcg gatccgcgac
     6841 cgctacgcct gccgcaggct atcggaagag cccgatcaat agcccgggcc gggcggggcc
     6901 gcctctggcg gcgggaccgc ttggccctcc gcctcgcgtg cttcggcttt tgcccggtcg
     6961 atcatattct ggaggcagcc ggtatggccg gcggggccga ctgcggagca gctcatgatt
     7021 ccggtgcggc cgacatattc gaagctcttt gccttgttgg cccagctctc gcgggtctgc
     7081 agcggaccgc tttcccgata gcgttccggg atacggtagc gctcggcctc cggcttgcgg
     7141 gcgcacacga cgacatcgct ttccgtcgag cgcgggcagg gatcgttgcc gtaaacgatc
     7201 acctcggcga tccgaacgtc gctcgcgctc tgggcagttg ccggagcgga caggcccatg
     7261 gccaatgcgc cagcgctcgc cgcggcggtc agggaaatca gcaacttgct catggtcaaa
     7321 acctttcacg gctaaagcgg gcaagggaca agcgaggttc ccctatatgc gtttcgacag
     7381 cgcgattgcg acacggcatg ccgcgcggat cgttccggtc aatagcggat atgccggagc
     7441 ccgggcagcg ccggcggcgc gcgcggtgtc acggtgctcc agctcctctg cctgaaattc
     7501 ggcaatgtcg gccgaaagct ccggatcgtc gtcgccaagt tcgtctagct gctgttggta
     7561 gtggcggtcg atctcggtct cgaccgcatc ggtgcacgcc atcgccgctt cctcgccgat
     7621 cagagccgtc ccggcgccga gagcgaagcc ggcgacattc caaagcggct gcaacaccgt
     7681 cgggcgcact cgccgctttg cgaccagctc gtcgaaccgc ttcaggtgcc gctgctcctg
     7741 tagcgccatt cgcgacacca tcttggccgc gggcgagctt ggcttcagga ctgcgagctg
     7801 gcccgcgtaa atgcgcgtcg cgccatattc cccagcctgg tcgacgcgga tcatcgaccg
     7861 cgtatcgggg cgtctttggc ccggtcgcca gggtccggtc accgtgcgcg ccttgcagcc
     7921 agggtcagcc aggctatcgc cgctgccccg gacagcgaaa ggattgcatt ccatcccgcc
     7981 atcgacaccc cgaggaacga ccattgcacc tcgtcgcagc ggatcagcgg gaccttcatc
     8041 agcttcttga gaagctcttc cgtgcttgtc gcagtggccg tcgacgtgca ggtcgtgaag
     8101 ccttcgaaaa tccccagctc gacaccggcg tgatagacgc cgatcgcgcc cgagaccgcg
     8161 atcgcgagtg ccgcgatgag cgtcagcgtt cgcgaacgct gggaatcggc gggcgagaac
     8221 aatgcgacac ccgcaagcag gattgcggct ccgtgcgggt agcgctgcca gtaacacatc
     8281 tcgcaagggt agagcccgcc gaaatattgc gagcccagcg cccctccgag aagtccgagc
     8341 ggcagaagga gagcaaggag gcgcccccat tgagcgcggg tcgacatcat cgttccgtgc
     8401 ccgtcaatcg tcgcttcagc caccgccgcc gcgcgctagc gcctggtgcc cgatttgccg
     8461 ccagctgatg cgactgctgt tcgcgaccca agccgcttca gcgtgttcag ggcgtagtgg
     8521 agctggaagt ccttgatgcc cttcttctcc agctcgtcgg cagtgacgga gaagcgcggg
     8581 tcctgcgacg tatcgtcatg ctccagcagc ttgtcgtccg ccttgacctg cgcgagtaga
     8641 tgccgccgaa gatccgcctc gcgaattgcc gggcggttct cgtaatcggg atcggacagc
     8701 tgcgggacgg cgatgtccgg atcgattccg ccggcctgaa ccgaccggcc agacggcgtg
     8761 tagtagcggg cggtggttag ccggagcgcc gaacgcgggc ccgtttggac gaccgtctgg
     8821 acgctgccct tgccgaagct cttttcgccc atcacca
//
LOCUS       DATAKH010000266         2402 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_15307,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000266 DATAKH010000000
VERSION     DATAKH010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15307"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1494)
                     /gene="gcvPB"
                     /locus_tag="VHN55_11180"
     CDS             complement(<1..1494)
                     /gene="gcvPB"
                     /locus_tag="VHN55_11180"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009822504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEX2804524.1"
                     /translation="MTVNPSGWRPSAPANEQGEAPTITGNRALQLEEPLLFERGHLDQ
                     TGVDLPEANIASARVGGLERNRDIGLPGLSEPEMVRHYTRLSRQNYAIDLGLFPLGSC
                     TMKHNPRLNEKVARMPGFADVHPLQPQETVQGALQVINTLAFWLLDLTGMYGVAMSPK
                     AGAHGELCGLLCIRSALEARGDVREVVLVPESAHGTNPATAAFAGYRVENIPANKVGR
                     VDLEALKARLGPDVAAVMITNPNTCGLFEPDMQAISDAVHEAGGFVYCDGANFNAIVG
                     KVRPGDLGIDAMHINLHKTFSTPHGGGGPGSGPVVVSEALAPFGPLPFAAKMPDGSYK
                     LVEEESAAEMHPGTFGRMTAFHGQMGMFTRALAYILSHGADGLRQVAEDAVLNANYVL
                     RRLEDVLDAPFGASGPCMHEAIFSDRGFAGGLSTIDLAKALIDEGFHPMTMYFPLVVH
                     GAMLVEPTETESKDALDQFIAAMRSIAERAKAGDESLKSAPVYAPRRR"
     gene            complement(1491..>2402)
                     /gene="gcvPA"
                     /locus_tag="VHN55_11185"
     CDS             complement(1491..>2402)
                     /gene="gcvPA"
                     /locus_tag="VHN55_11185"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010123640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEX2804525.1"
                     /translation="RITRRKKAILSSGLHPHYVSVCTTMARFTGDTLETSTPQLSVKT
                     DADRLISAIDDETSAVVVQYPDILGRITDLAPIAEAAHAKGALLIAVVTEPVALGLIK
                     SPGEMGADIVVGEGQSIGVGLQFGGPYVGLFACAEKFVRQMPGRLAGETVDAEGKRGF
                     VLTLSTREQHIRREKATSNICTSSVLCALAFTAHLTLLGEKGLRRLASLNHARACEVA
                     DRLDAIPGVEVVNDTYFNEFTVKLPVEARPAVHALVKKGVLGGVSLGRLYPDAAELQN
                     GLVVAVTETVTDEDIDAFEAALKEVVR"
BASE COUNT          396 a          794 c          787 g          425 t
ORIGIN      
        1 ccgccgccga ggggcgtaaa ccggcgccga cttgaggctc tcgtcccccg ccttggcccg
       61 ttccgcgatc gagcgcatcg cggcgatgaa ctggtcgagc gcgtccttcg actcggtctc
      121 ggtcggctcc accagcatcg cgccgtgaac caccaacggg aagtacatgg tcatcgggtg
      181 gaagccctcg tcgatcagcg ccttggcgag gtcgatcgtg cttaatcccc ccgcaaagcc
      241 gcgatcggag aagatcgcct cgtgcatgca cggtccgctc gccccgaacg gcgcgtccag
      301 cacgtcctcc agacggcgca gcacgtaatt ggcgttcaga accgcgtcct cggcgacctg
      361 gcggagcccg tcggccccgt ggctgaggat gtaggcgagc gctcgggtga acatccccat
      421 ctgcccgtgg aacgcggtca tccggccgaa cgtgcccgga tgcatctcgg ccgcgctttc
      481 ctcctcgacc agcttgtagc ttccgtcggg catctttgcc gcgaacggca acggcccgaa
      541 tggcgcgagc gcttctgaca cgacgaccgg cccggatccg ggaccgccgc cgccgtgagg
      601 agtcgagaag gtcttgtgca agttgatgtg catcgcgtcg atgccgaggt cgccggggcg
      661 gaccttgccg acgatcgcgt tgaaattggc gccgtcgcaa tagacgaagc cgccagcctc
      721 atggaccgca tcgctgatcg cctgcatatc cggctcgaac agcccgcagg tgttggggtt
      781 ggtgatcatc accgcggcga cgtccggtcc gagacgggcc ttaagcgctt cgagatcgac
      841 cctgccgacc ttgttcgcgg ggatgttttc gacccggtag ccggcgaacg ccgcggtcgc
      901 cgggttggtg ccatgcgcgc tttcggggac cagtacgacc tctcggacgt cgcctcgcgc
      961 ttcgagcgca gagcggatgc acagaaggcc gcaaagctca ccatgtgcac ccgctttcgg
     1021 gctcatcgcc acgccgtaca ttccggtgag gtcgagcagc cagaaggcga gagtattgat
     1081 gacctggagc gcgccctgca ccgtctcctg cggctgcagc ggatggacat cggcgaagcc
     1141 tggcatccgc gcgaccttct cgttgagccg cggattgtgc ttcatcgtgc acgagccgag
     1201 cgggaagagg ccaaggtcga tcgcataatt ctgccgcgac aggcgcgtgt agtgccggac
     1261 catttccggc tcggataggc ccggcaggcc gatgtcgcgg ttgcgctcca acccgccgac
     1321 acgcgcgctg gcgatgttgg cttcgggaag gtccactccc gtctggtcga ggtgaccgcg
     1381 ctcgaacagc aagggctcct cgagctggag cgcgcgattg cccgttatcg ttggcgcttc
     1441 gccctgctca ttggcgggag cgctaggacg ccagcctgaa ggattgacgg tcatcggacc
     1501 acctccttca gcgccgcttc aaaggcgtcg atgtcctcgt cggtcacggt ctcggtgact
     1561 gcgacgacca ggccgttctg tagctccgcg gcgtccggat agaggcgtcc gagcgaaacc
     1621 ccgccgagga cgcccttctt aaccagcgca tgtaccgcag gccgcgcttc gaccgggagc
     1681 ttcaccgtga attcgttgaa gtaagtgtcg ttgacgacct cgacgcccgg gattgcgtca
     1741 agccggtcgg ccacctcgca cgcgcgcgcg tgattcaggg aagcgagacg gcgaagcccc
     1801 ttctcaccca gaagggtcag gtgcgctgtg aaggccagcg cgcacaggac tgagctggtg
     1861 cagatgttgc tcgtcgcctt ctcgcgacgg atatgctgct cccgtgtcga aagggtcagc
     1921 acgaacccgc gcttgccctc cgcgtccacg gtctcgccgg caagccgtcc cggcatttgg
     1981 cggacgaact tctccgcgca ggcgaacagc ccgacatagg gcccgccgaa ctggagcccg
     2041 accccgatgc tctggccctc gccgacgacg atgtcggcac ccatttcgcc gggcgacttg
     2101 atcaatccca aggccaccgg ctcggtgacg acggctatca gaagcgcgcc tttggcatgt
     2161 gcggcctcgg cgatcggcgc caaatcggtg atccggccga ggatgtcggg atattggacg
     2221 accaccgcgc tggtttcgtc gtcgatcgcc gagatcagcc gatcggcgtc ggtcttgacg
     2281 gaaagctgcg gggtcgatgt ttcgagcgtg tcgccggtga agcgcgccat tgtcgtacag
     2341 acgctgacgt aatgcggatg aagcccggag gagaggatcg cctttttccg gcgcgtgatc
     2401 cg
//
LOCUS       DATAKH010000267         8769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Sphingomicrobium sp. isolate SMAG_U6933 k141_15469,
            whole genome shotgun sequence.
ACCESSION   DATAKH010000267 DATAKH010000000
VERSION     DATAKH010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955549
            Sequence Read Archive: SRR12773050
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Sphingomicrobium sp. (soil metagenome)
  ORGANISM  Sphingomicrobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomicrobiaceae; Sphingomicrobium.
REFERENCE   1  (bases 1 to 8769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 03:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,248
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,179
            CDSs (with protein)               :: 2,179
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 2 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 6 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8769
                     /organism="Sphingomicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15469"
                     /isolate="SMAG_U6933"
                     /isolation_source="soil"
                     /db_xref="taxon:1940456"
                     /environmental_sample
                     /geo_loc_name="Canada"
                     /lat_lon="49.700158 N 112.7633999 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            320..976
                     /locus_tag="VHN55_11190"
     CDS             320..976
                     /locus_tag="VHN55_11190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007704842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase family protein"
                     /protein_id="HEX2804526.1"
                     /translation="MNSVDLASLLCSRLCHDLMSPVGALNNGIELLADEQDPDMRDRC
                     VELVSDSARATANKLKFFRLAFGAAGGFGDAVDSNEARGALEGLLGQDGKVELGWMVG
                     DAKLSKSATKLLLNLALIAGDALVRGGRLDIGAESGDEGTEIAIRAEGPRIALDSGIR
                     DVLTDNAGEAVEARTAGAWLAQSLAKEAGGTILLSQPSPEILVIGAALPAAGGSPTQG
                     "
     gene            1041..3374
                     /locus_tag="VHN55_11195"
     CDS             1041..3374
                     /locus_tag="VHN55_11195"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010217428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HEX2804527.1"
                     /translation="MDDLIADFVAESREMLEALGGEIVAWEANPDDRARLDSIFRFVH
                     TVKGNCGFFEFPRLEALSHAAEDALADVRGGRRQADAPLVSAVLAVIDRIGEMIANIE
                     SGAELPDGDDTALIDALEPGAEGAAAPVAATVAEQGRSAAPRTIRLSVELLDRVMSTV
                     SDMVLARNELARRLREASTEVSVDGAFERLSSIIAEMRDAITRTRMQRIENLFVALPR
                     MVRDLSAELGKQVLVDIEGGDVELDREMIEMIRDPLTHIIRNAVDHGIESPAERLKAG
                     KREIGLLSVSARQSGNQILIDIQDDGAGIDGKKLVAKAIASGVLEKEDASKLSPREQL
                     ALMFEAGLSTAKEVTAISGRGVGMDVVRSNVERIGGIVEVDSALGEGTRMTLRVPLTL
                     TIIPALTVSIANHHFAIPRSAIVEIVRANGESVSLDSVGGAGVATIRGKRVPEIALAD
                     VLGLESSVAENERNLVVLRPAGGDVYALAVDRIHDHEELVVKPAAPQVMATGLYAGTT
                     LADDGSPILLFDPAGLAEVAGVKLEAQERAARVAKGPAAAAVQAVSVLLFRGLDGARR
                     ALRLAVVDRIEEVPVSAVKPGAGQLRVQLGEAILPLAGVNGDLPQGKVRVFRLNDGAN
                     EIGYAFEEVIDLSIIDSQVIPAENPGEISAVTLIAGEPAELVDAHWLFAHHLGIAAGT
                     VTDQPLCRLPSGDPWMQNMLRPIVEAVGYRVVGDEHEGEADLVITSERKSASKAGRTI
                     VIRSDPEASGKGDDSIYRYDRAGLLMALKSAGGGKGR"
     gene            3371..3808
                     /locus_tag="VHN55_11200"
     CDS             3371..3808
                     /locus_tag="VHN55_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX2804528.1"
                     /translation="MNELLLIVTIAGERVALPAAAVESVVELDTLIPVPRAAPQVAGL
                     SALRSRVLTVIDCMRSLELGTSDTSDGIREAAVVEIDGHHYALIVDVVEDVIEAASEP
                     SPVRAAMGPGWERVSKGMVETEVGPLLLVDVAALISGSEARAA"
     gene            3868..4233
                     /locus_tag="VHN55_11205"
     CDS             3868..4233
                     /locus_tag="VHN55_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010402926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX2804529.1"
                     /translation="MKSCLIVDDSKVIRKVARHILETLEFEVEEAGDGQEALTRCEEK
                     MPDVVLLDWNMPVMSGMEFLRMLRQRGHEDQPKVVFCTTENDMAHIRAALEAGADEYV
                     MKPFDRETLHVKLQLVGVA"
     gene            4317..5351
                     /locus_tag="VHN55_11210"
     CDS             4317..5351
                     /locus_tag="VHN55_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX2804530.1"
                     /translation="MIVDDSMVARAVLSRIVESDDSFELAAVAGTAEDAIDALRIVSV
                     DIVLLDLEMPGAGGLRMIPEILKAADGARVMIVSSLADEGKEQTIAALALGATDAMPK
                     PGTGRFNGRFAEVLLAKLKAIGFADEQAPLSEPIRLQGFGPLRAMPADPIGLLAIGSS
                     TGGIHAIASLFKALPPRLGVPILVTQHLPSPFMSVFARQLGIAARREALVGEDGMKLA
                     ADRIIVAPGDAHLTIEPDGRGHAVRLVRERSPSGCLPSVDPMFASAGTEFGASAVGVI
                     LTGMGRDGVQGAGRLVACGGSVLAQDEASCAVWGMPRAVIEAGLACAVMPPDKIARRI
                     ASRSGELPCK"
     gene            5342..6214
                     /locus_tag="VHN55_11215"
     CDS             5342..6214
                     /locus_tag="VHN55_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015457464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEX2804531.1"
                     /translation="MQVSDSSSRILAGLLEARTGQQLTMNRRWRIETAVSALLRERGI
                     STLDELITILVMGKEPGLSNQVVEALLNNETYFFRDRSPFDLIARHALPELAKKRHSS
                     RRIRIWSAGCSTGQEAYSLAMLFAENPEQWTGWSIDILGTDVSSAVVDRARSGTYTQF
                     EVQRGLGINQTIRWFEESGDGWRAVESLRKPVRFQVHNLLEVPPHPGEFDIVLCRNVL
                     LYLTAEKRTLAFERLAAAIAPDGWLMLGAGETVIGQTKRFAADVEARGLYRRTDGGAV
                     VEKRSGDRRVAAKA"
     gene            6246..6926
                     /locus_tag="VHN55_11220"
     CDS             6246..6926
                     /locus_tag="VHN55_11220"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX2804532.1"
                     /translation="MAFIERPSPNFDERALPISMIVLHYTGMPDAGSALDRLTSPDAG
                     VSAHYFVDEDGTTYQLVEESKRAWHAGKSRWRGVTDVNSASVGIEIVNPGHEFGYRPF
                     PDEQIAAVIPLIASIKERHGISRGNVVGHSDVAPARKEDPGELFPWDALAKRRLALPS
                     PTRELVDPFWTDAGFLLALERFGYDVTEAKKAVIAFQRRFRPDRIDGIIDGECRAKLL
                     SLLLPRPQ"
     gene            6942..7313
                     /gene="rnpB"
                     /locus_tag="VHN55_11225"
     ncRNA           6942..7313
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VHN55_11225"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            7360..7908
                     /locus_tag="VHN55_11230"
     CDS             7360..7908
                     /locus_tag="VHN55_11230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014074717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEX2804533.1"
                     /translation="MAKQKRSDDWGFPRWRSYGKAGRSAARVRLCDRVGCDNVGDRPA
                     PKAPNSPERWYFCEAHAAEYNKNWNYFAGLSPEEAARRAAEEANGASGFRSSAHWQWA
                     GPGDETRSRDEMRALSVLEVDSDADFKTIRTAYRQLAKQHHPDLKQGDKEAEARFREI
                     QAAYDVLKKAEERRAQDVQGNV"
     gene            complement(7933..8364)
                     /locus_tag="VHN55_11235"
     CDS             complement(7933..8364)
                     /locus_tag="VHN55_11235"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019369917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX2804534.1"
                     /translation="MSDTAKGFDPHGFFEVARKIGHGRALGLEFRASGDNWAELALPW
                     REELVGVPETGILASGAIVSLVDTASGTSVWVTLDRFVPIVTVDLRLDYLRPAVRGET
                     IVTRCECVKLTRRIAFVRGVAHGGEDERPIALSAATFMLNR"
     gene            complement(8364..8768)
                     /locus_tag="VHN55_11240"
     CDS             complement(8364..8768)
                     /locus_tag="VHN55_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007013661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HEX2804535.1"
                     /translation="MPPITDVLSEYEFLDPEDRYRLLIELGRKLEPMPDALKTDATKV
                     RGCSADVWVYPTTTDDGRLHFLADSNAAITKGIVALVLSAIQDKPAKEVAHTDITAEL
                     APFELSRHLSANRTQGVPNMIALVHETAKRLA"
BASE COUNT         1526 a         2799 c         3005 g         1439 t
ORIGIN      
        1 attcgacaca agcaaagctg acgcaaatca tccctgcgac gcgaaccggg tgctagtgtc
       61 cgcaacggtc gaagctgtcg cggcagcttc gggtggaagc ggactttagc gactctaagc
      121 aactccttca gcgattaaag gacgggccgt ggagggagcg catttcgagt atggctgcgt
      181 cactcggcta atgtccgcaa tgggtcgaaa acggacgttg gcaagttgca catggcgggc
      241 ggtggcggaa tcgtcgcccg tgagaggata accccgtggc ttcttgcctc ggcgggcggt
      301 ctgccgcatt cagcgcgcca tgaactccgt cgaccttgca agcctgctct gctcgcgcct
      361 ttgccatgac ctgatgtcgc cggtgggcgc gctcaacaac gggatcgagc tgctcgccga
      421 cgagcaggac ccggacatgc gcgaccgctg cgtcgagctg gtgtcggaca gcgcccgggc
      481 gaccgcgaac aagctgaagt tcttccggct cgcgttcgga gcagccggcg gttttgggga
      541 tgcggtcgac agcaacgagg cgcgcggggc actcgagggg ctgctggggc aggatggcaa
      601 ggtcgagctg ggctggatgg tcggcgacgc caagctatcc aagagcgcga ccaagctgct
      661 tctcaacctc gctctgatcg ccggcgacgc gctggtccgc ggcgggcggc tcgatatagg
      721 cgccgagagc ggggacgagg gtaccgagat tgcaatccga gccgaggggc cgcgaatagc
      781 gctggattcc ggaatccgcg acgtgctgac cgataacgcc ggtgaggcgg tggaggcgcg
      841 taccgccggc gcctggctgg cgcagagcct ggcaaaggaa gcgggcggca ccatcctgct
      901 gtcgcagccg tcgcccgaga tcctggtgat cggcgcagcg ctgccggcgg cgggcggatc
      961 accgacacag ggataacgca gcgttaactc ctgcgcgcca taaggccgga gacttccgtg
     1021 ccttggggac agctgcgcaa atggacgacc tgattgccga tttcgtcgcg gagtcgcgcg
     1081 agatgctcga ggctctcggc ggcgaaatcg tcgcgtggga ggccaatccc gacgaccgcg
     1141 cccggctcga ttccatcttc cgcttcgtcc acacggtcaa aggcaattgc ggctttttcg
     1201 aattcccgcg gctcgaggcg ctcagccacg ccgccgagga cgcgctcgcc gacgttcgcg
     1261 ggggccgccg ccaggccgat gccccgctgg tcagcgccgt cctcgcggtc atcgaccgga
     1321 tcggcgagat gatcgcgaat atcgaaagcg gggctgagct tccggacggg gacgacaccg
     1381 cccttatcga cgcgctcgag ccgggggccg aaggcgcggc tgctccggtc gcggccaccg
     1441 tcgccgagca ggggaggagc gcagcgccgc ggacgatccg gctttccgtc gagctgctcg
     1501 accgggtgat gagcaccgtg tccgacatgg tcctcgcccg caacgagctg gcgcggcggc
     1561 ttcgtgaagc ctcgaccgag gtgtcggtgg acggcgcttt cgagcgcctg tcgtcgataa
     1621 tcgccgaaat gcgcgacgcc atcacccgca cccggatgca gcggatcgag aatttgttcg
     1681 tcgctctccc gcgaatggtc cgcgaccttt cggccgagct cggcaagcag gtcctggtcg
     1741 atatcgaagg gggcgacgtc gagctcgacc gcgaaatgat cgagatgatc cgcgatccgc
     1801 tgacccatat catccgtaac gcggtcgacc acgggatcga gagcccggcc gagcggctga
     1861 aggccggaaa gcgcgagatc ggactcctct cggtgtcggc gcggcagtcc ggcaaccaga
     1921 tcctgatcga catccaggac gacggcgctg gaatcgacgg caagaagctg gtcgccaagg
     1981 cgatcgcttc cggcgtcctg gagaaggagg acgcgtcgaa gctgtcgccg cgcgagcagc
     2041 tggcgctgat gttcgaagcc gggctttcga ccgcaaagga agtcaccgcc atctccggcc
     2101 gcggggtcgg gatggacgtc gtccgttcca acgtcgagcg gattggcggg atcgtcgagg
     2161 tcgacagcgc gctcggcgag ggcacccgga tgaccctgcg ggtgccgctg accctgacca
     2221 tcatcccggc gctcacggtt tcgatcgcca atcaccattt cgcaattccg cgatcggcga
     2281 tcgtcgagat cgtccgggcc aatggcgagt ccgtctctct cgacagcgtc ggaggcgccg
     2341 gggtggcgac cattcgcggc aagcgagtcc ccgagatcgc gcttgccgat gtcctcggcc
     2401 tcgaaagttc ggttgccgag aacgagcgca acctcgtcgt gcttcgcccg gcggggggcg
     2461 atgtctacgc gctcgccgtc gaccggatcc acgatcacga ggagctggtc gtgaaaccgg
     2521 ccgctccgca ggtgatggcg accggccttt atgccggtac cacgcttgcc gacgacggca
     2581 gcccgatcct gctgttcgac cctgccggcc tggccgaggt cgctggagtg aagctcgagg
     2641 cgcaggagcg cgccgcacgc gtcgccaagg gcccggctgc agcggcagtc caagccgttt
     2701 ccgtcctgct gttccgcggc ctcgacggcg cccgacgggc acttcgcctg gcagtcgtcg
     2761 accggatcga ggaagtgccg gtcagcgcgg tcaagcctgg cgccgggcag cttcgggtcc
     2821 agctgggcga agccattctt ccgctcgccg gagtcaacgg cgaccttccg caaggcaagg
     2881 tacgagtatt ccggctcaac gacggcgcta acgagatcgg ctatgccttc gaagaggtca
     2941 tcgacctgtc gatcatcgac agccaggtca tcccggcgga gaacccgggc gagatcagcg
     3001 cggtcacgct gatcgccggc gagcccgccg agctggtcga cgctcactgg ctgttcgccc
     3061 accatctggg gatcgcggcg ggcaccgtga cggaccagcc gctgtgccgg ctcccgagcg
     3121 gcgatccgtg gatgcagaac atgcttcgcc cgatcgtcga agccgtgggc taccgcgtag
     3181 tgggagacga gcatgaaggc gaggccgacc tcgtgatcac ttccgagcgc aagtccgcga
     3241 gcaaggccgg gcggacgatc gtcatccgct ccgatccgga agcctccggg aagggcgacg
     3301 acagcatcta caggtacgac cgagcggggc tattgatggc gctcaagtcc gccggcgggg
     3361 ggaagggccg atgaacgagc ttctgctgat cgtcacgatc gccggggagc gagtggcgct
     3421 tcccgccgcg gcggtggaat cggttgtgga gctggacact ttgatcccgg tcccgcgggc
     3481 tgcaccgcag gttgccgggc tgtctgcgct tcgaagccgg gtgctgaccg tcatcgactg
     3541 catgcgctcg ctcgagcttg ggacgtccga cacgtccgac ggcatccgcg aggcggccgt
     3601 cgtcgagatc gacgggcatc attatgcgct gatcgtcgac gtcgtcgagg acgtcatcga
     3661 agcagccagc gaaccctcgc cggtccgagc ggcgatgggg cccggctggg agcgggtttc
     3721 gaagggaatg gtcgaaacgg aggtcgggcc gttgctgctc gtggatgtcg cggcgctgat
     3781 ttccggctcc gaggcgagag cggcttaagc ccttggttac cgttcgtgag tatatgaccc
     3841 agcaatccag cggggaagct tgaagccatg aaaagctgtt tgatcgtcga tgactccaag
     3901 gtgatccgca aggtcgcccg ccatatcctc gaaaccctcg agttcgaggt cgaggaagcc
     3961 ggcgacgggc aggaggccct gacccgctgc gaggagaaga tgcccgacgt cgtccttctc
     4021 gactggaaca tgccggtgat gagcgggatg gaattcctgc ggatgcttcg ccagcgcggt
     4081 cacgaggacc agccgaaggt cgtgttctgc accaccgaga acgacatggc gcacattcgc
     4141 gctgctcttg aagccggtgc cgacgaatat gtgatgaagc cgttcgatcg agagacgctg
     4201 cacgtcaagc ttcagctcgt cggcgtcgcg taagagcgcg ggtcgtggag caggcgctcg
     4261 caagatcgcg ggatcgccat aatgccggcc cgccgcagag gcggcgaatt cggctgatga
     4321 tcgtcgacga ttcgatggtt gcccgggcgg tgctctcacg gatcgtcgaa agcgacgata
     4381 gtttcgaact cgctgcagtt gccggaaccg ccgaggacgc gatcgacgcg cttcggatcg
     4441 tcagcgtcga tattgtcctg ctcgatctcg aaatgccggg cgcgggcggg ctccggatga
     4501 tcccggaaat cctgaaggca gcggacggcg ctcgtgtgat gatcgtctcg tcgctcgctg
     4561 acgagggcaa ggaacagacg atcgcggccc ttgcactggg agcgacagac gccatgccaa
     4621 agcccggcac cggccgcttc aacggccgct tcgccgaggt ccttttggcg aagctgaagg
     4681 cgatcggctt tgccgacgag caagcgccgc tttccgagcc tatccggctg cagggcttcg
     4741 gaccccttcg ggcgatgccg gccgatccga tcgggttgct cgcgatcggg tcgtcgaccg
     4801 gcggaatcca tgcgattgct tcgctgttca aggcgcttcc gcccaggctt ggagtgccga
     4861 tcctcgtcac ccagcacctc ccgtcgccgt tcatgagcgt cttcgctcgg cagctcggca
     4921 ttgccgcccg tcgcgaggcg ctcgtcggcg aagacgggat gaagctcgcc gccgatcgaa
     4981 tcatcgtcgc tcccggcgat gcccatttga cgatcgaacc ggacggccgc ggtcacgccg
     5041 tcaggctggt ccgcgagcgc tcaccgagcg ggtgccttcc ttccgtcgac ccgatgttcg
     5101 cttcggcggg caccgaattc ggcgcgtcgg ccgtcggcgt gattcttacc ggcatgggca
     5161 gggacggcgt ccagggcgcc ggccggctgg tcgcctgcgg cggctcggtc ctggcgcagg
     5221 acgaagccag ttgcgcggtc tggggaatgc cgcgcgccgt catcgaggcg ggcctggcct
     5281 gcgccgtaat gccgccggac aagatcgccc ggcggattgc atcccggagc ggagagctgc
     5341 cgtgcaagta agcgacagct cgagccggat cctcgcgggg cttctcgagg cgcggaccgg
     5401 ccagcaactg accatgaacc gccgctggcg gatcgaaacg gcggtctccg cgctgcttcg
     5461 cgaacgcggc atctccacgc tcgacgagct catcaccatc ctcgtgatgg gcaaggagcc
     5521 ggggctttca aaccaggtgg tcgaggcact tttgaacaac gaaacctatt tcttccgcga
     5581 ccgctcgccg ttcgacctga tcgcccgcca cgcgcttccg gagctcgcaa agaagcggca
     5641 ttccagccgc cgcattcgga tctggtcggc cggctgttcc accgggcagg aggcctattc
     5701 gctggcgatg ctgttcgccg aaaatccgga gcagtggacg ggctggtcga tcgacattct
     5761 gggaaccgac gtgtcgtcgg ctgtcgtcga tcgcgcccgc agcggaacct acacccagtt
     5821 cgaggtccag cgcggccttg gaatcaatca gaccatccgc tggttcgaag aatcgggaga
     5881 cggctggcgg gcggtcgaaa gcctgcgcaa gccggtacga ttccaggtcc acaacctgct
     5941 ggaagtgccg cctcacccgg gcgagttcga catcgtgctg tgccgcaacg tgctccttta
     6001 cctgaccgcc gaaaagcgga ctcttgcgtt cgagcggctc gccgcggcca tcgcgccaga
     6061 cgggtggcta atgctcggtg ccggcgaaac cgtgattggc cagaccaaaa ggttcgcggc
     6121 cgacgtcgag gcgcggggcc tctatcgccg gaccgacggc ggcgcggtcg tcgagaagcg
     6181 cagcggcgac cgcagggtgg ccgccaaggc ttgaccggac ggcgcagtcg tgcgcctttc
     6241 cggcaatggc tttcatcgag cggccttcgc caaatttcga cgagcgcgcg ctgccgatct
     6301 cgatgatcgt gctccattat acgggaatgc cggatgccgg cagcgccctc gaccggctga
     6361 cctcgccgga cgccggcgta tcggctcatt atttcgtcga cgaggacggc acgacctatc
     6421 agttggtcga agagtcgaag cgcgcctggc acgcgggcaa gtcgcgctgg cggggggtga
     6481 ccgacgtcaa ttccgcgagc gtggggatcg agatcgtcaa tcccggccac gaattcggct
     6541 accgtccgtt ccctgatgag cagatcgccg ccgtcatccc gctgatcgcc tcgatcaaag
     6601 agaggcacgg gatcagccga ggcaatgtcg tcggccactc cgacgtcgca cccgcgcgca
     6661 aggaggaccc cggcgagctg tttccgtggg acgcgcttgc aaagcgaagg ctggcgctac
     6721 cgagcccgac gcgcgagctg gtcgacccgt tctggaccga cgctggcttc ctgctggcgc
     6781 tggagcgctt cggctatgac gtgaccgagg ccaaaaaggc ggtgatcgcc ttccagcggc
     6841 gtttccgacc cgaccgcatc gacgggatca tcgacggcga atgccgggcg aaactgctgt
     6901 cgctattgtt gccgagaccg cagtaaccca tattgagagc gccagagggc cgggcggccg
     6961 cggcggggac ttgttcccgg cgaggaaagt ccgggctcca cggaaacaac ggtgccgggt
     7021 aacgcccggc cgggggtccg cctccgaggg atagtgccac agaaaggatt ccgcccgcct
     7081 tcggacgggt aaggtcgaaa gggtgcggca agagcgcacc gcgtcactgg caacaggggc
     7141 ggcacggtaa accccaccgg gtgcaagacc gaatagggga ggcatatggg cttgttccgg
     7201 ctcgccgccc gggttggtcg cttgatcctg cgcgcaagtg cagggctaga cgaatggccg
     7261 cacaggcgta gcaatgcgct ggacagaacc cggcttacag gccctctggc actagacttc
     7321 actggcgctg cacccgctgc gccactaact ttggatgaca tggcgaagca gaagcgctcc
     7381 gacgattggg gattcccccg ctggcggtcc tacggaaagg ccggccggag cgcggcgcgc
     7441 gttcgcctgt gcgaccgcgt cggctgcgac aatgtcggcg accgacccgc gccaaaggct
     7501 cccaacagcc ccgaacgctg gtatttctgc gaggcgcacg ccgccgagta caacaagaac
     7561 tggaattatt tcgcaggcct cagccccgaa gaggccgcca ggcgcgccgc cgaggaggcg
     7621 aatggcgcga gcgggttccg gagctcggct cactggcagt gggcggggcc cggcgacgaa
     7681 acccgaagcc gcgacgaaat gcgggcgctt tccgttctcg aagtggattc cgacgccgat
     7741 ttcaagacga tcaggaccgc gtaccgccag cttgccaagc agcaccatcc cgacctcaag
     7801 cagggcgaca aagaggccga ggcacgcttt cgcgagatcc aggccgctta cgacgtgttg
     7861 aagaaggccg aggaacgccg ggcgcaggac gttcagggga acgtctgagc acggcgtagt
     7921 tggagctggg cgctaccgat tgagcatgaa ggtggcggcg cttagagcga tcgggcgctc
     7981 gtcctctccg ccatgcgcaa ctccacggac gaaggcgatc cgccgagtga gcttcacgca
     8041 ctcgcaacgc gtgacgatcg tctcccccct caccgccggc cgtaggtagt cgagcctaag
     8101 gtcgacagtc acgatcggca cgaaccggtc gagtgtcacc catacggatg tgccgctcgc
     8161 ggtgtcgacc aggctgacga ttgcgcccga agcgaggatc ccggtctccg gcacgcccac
     8221 caactcctcg cgccagggga gcgccagttc cgcccaattg tctcccgaag cacggaattc
     8281 gaggccgagc gctcgcccgt ggccgatttt ccgagcgacc tcgaagaatc cgtgcgggtc
     8341 gaaacccttt gcagtatcgc tcatcaggcc agccgcttcg cggtttcgtg gaccagcgcg
     8401 atcatgttgg ggacaccctg ggtccggttg gcgctcaggt gccgcgacag ttcgaacggg
     8461 gcgagctcgg cggtgatgtc ggtgtgggcg acctccttcg cgggcttgtc ctggattgcc
     8521 gaaagcacca gcgcgacaat gcccttggtg atcgctgcgt tgctgtccgc aaggaagtgc
     8581 agccggccat cgtcggtcgt ggtcggatag acccagacgt cggccgaaca gccgcgcacc
     8641 ttcgtcgcgt cggtcttgag agcgtcgggc atcggctcga gcttgcggcc gagctcgatc
     8701 agcagccggt aacggtcttc cggatcgagg aattcatatt cggaaaggac gtccgtgatc
     8761 gggggcagg
//
